Query 017569
Match_columns 369
No_of_seqs 216 out of 2782
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 09:45:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017569.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017569hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0076 GadB Glutamate decarbo 100.0 2.3E-54 5.1E-59 422.3 31.6 324 30-363 31-365 (460)
2 PF00282 Pyridoxal_deC: Pyrido 100.0 4.3E-53 9.3E-58 406.6 27.8 327 24-363 5-358 (373)
3 TIGR01788 Glu-decarb-GAD gluta 100.0 1.2E-51 2.6E-56 402.2 34.9 344 17-363 2-349 (431)
4 PLN02590 probable tyrosine dec 100.0 6.8E-52 1.5E-56 411.2 31.5 328 21-363 93-451 (539)
5 PLN02880 tyrosine decarboxylas 100.0 5.7E-49 1.2E-53 390.0 29.5 329 21-363 45-403 (490)
6 PLN02263 serine decarboxylase 100.0 3.9E-47 8.5E-52 368.5 31.2 293 39-362 75-384 (470)
7 KOG1383 Glutamate decarboxylas 100.0 2.2E-46 4.8E-51 350.1 24.6 343 5-362 29-376 (491)
8 TIGR03799 NOD_PanD_pyr putativ 100.0 7.2E-46 1.6E-50 368.7 29.8 324 26-363 56-423 (522)
9 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.7E-45 5.8E-50 367.3 30.9 321 31-360 54-476 (608)
10 PLN03032 serine decarboxylase; 100.0 6.7E-45 1.4E-49 348.1 30.2 265 72-362 39-317 (374)
11 PRK02769 histidine decarboxyla 100.0 5E-44 1.1E-48 344.3 30.6 282 53-361 19-313 (380)
12 KOG0629 Glutamate decarboxylas 100.0 3.5E-41 7.7E-46 311.1 19.4 322 27-363 70-417 (510)
13 KOG0628 Aromatic-L-amino-acid/ 100.0 2E-40 4.3E-45 309.3 23.8 329 22-363 37-397 (511)
14 PRK13520 L-tyrosine decarboxyl 100.0 2.4E-33 5.2E-38 271.0 30.2 301 37-361 2-304 (371)
15 cd06450 DOPA_deC_like DOPA dec 100.0 3.2E-33 6.9E-38 267.5 23.0 258 61-362 3-270 (345)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.1E-31 4.5E-36 257.7 31.3 301 38-361 1-309 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 2.8E-30 6.1E-35 242.2 27.4 262 64-359 9-279 (386)
18 COG0520 csdA Selenocysteine ly 100.0 2.7E-29 5.9E-34 243.2 27.6 276 55-362 21-322 (405)
19 PLN02651 cysteine desulfurase 100.0 2.6E-27 5.7E-32 228.5 28.2 260 65-358 8-277 (364)
20 TIGR03531 selenium_SpcS O-phos 100.0 9.4E-28 2E-32 233.6 23.7 300 23-359 21-344 (444)
21 PRK04366 glycine dehydrogenase 100.0 4E-26 8.8E-31 227.3 29.1 300 30-359 44-368 (481)
22 TIGR03235 DNA_S_dndA cysteine 100.0 3.5E-26 7.6E-31 219.8 27.4 266 65-361 7-282 (353)
23 TIGR01977 am_tr_V_EF2568 cyste 100.0 3.6E-26 7.9E-31 221.3 27.6 263 67-361 11-291 (376)
24 KOG1549 Cysteine desulfurase N 100.0 1.7E-26 3.6E-31 217.6 23.1 246 60-337 47-299 (428)
25 PRK05367 glycine dehydrogenase 99.9 2.7E-26 5.9E-31 241.3 25.9 296 37-359 478-793 (954)
26 TIGR00461 gcvP glycine dehydro 99.9 2.5E-25 5.5E-30 230.5 30.7 292 38-358 467-784 (939)
27 TIGR02006 IscS cysteine desulf 99.9 3.3E-25 7.1E-30 216.7 27.8 265 63-361 10-284 (402)
28 TIGR03392 FeS_syn_CsdA cystein 99.9 3.1E-25 6.8E-30 216.6 26.5 267 60-360 20-313 (398)
29 TIGR03402 FeS_nifS cysteine de 99.9 7.5E-25 1.6E-29 212.5 28.9 257 65-358 8-273 (379)
30 cd06453 SufS_like Cysteine des 99.9 4E-25 8.8E-30 213.8 26.9 264 67-362 10-297 (373)
31 PRK09295 bifunctional cysteine 99.9 7.9E-25 1.7E-29 214.3 28.1 267 60-360 27-321 (406)
32 PRK10874 cysteine sulfinate de 99.9 7.3E-25 1.6E-29 214.2 27.6 264 60-359 23-315 (401)
33 PF00266 Aminotran_5: Aminotra 99.9 1.2E-24 2.6E-29 210.5 24.8 268 64-363 7-298 (371)
34 PRK00451 glycine dehydrogenase 99.9 1.5E-24 3.2E-29 215.0 25.5 311 11-362 21-374 (447)
35 TIGR01979 sufS cysteine desulf 99.9 4.9E-24 1.1E-28 208.5 27.7 270 60-360 22-315 (403)
36 TIGR03403 nifS_epsilon cystein 99.9 8.2E-24 1.8E-28 205.5 27.5 261 65-360 8-279 (382)
37 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.4E-24 7.3E-29 208.5 24.3 257 67-361 31-302 (387)
38 PRK02948 cysteine desulfurase; 99.9 1.2E-23 2.5E-28 204.3 28.0 261 65-361 9-278 (381)
39 PLN02855 Bifunctional selenocy 99.9 6.3E-24 1.4E-28 209.1 26.3 270 60-360 36-329 (424)
40 TIGR01976 am_tr_V_VC1184 cyste 99.9 6.3E-24 1.4E-28 207.2 26.0 269 60-361 21-315 (397)
41 COG0436 Aspartate/tyrosine/aro 99.9 4.4E-24 9.6E-29 206.9 23.9 272 56-363 29-316 (393)
42 PRK14012 cysteine desulfurase; 99.9 1.1E-23 2.4E-28 206.1 26.7 262 65-360 12-285 (404)
43 PLN02409 serine--glyoxylate am 99.9 2.9E-24 6.2E-29 209.9 22.2 257 67-361 19-294 (401)
44 cd06451 AGAT_like Alanine-glyo 99.9 2.7E-24 5.8E-29 206.8 21.4 257 67-361 9-280 (356)
45 cd00613 GDC-P Glycine cleavage 99.9 2.3E-23 5E-28 203.3 27.1 288 41-363 3-331 (398)
46 PLN02414 glycine dehydrogenase 99.9 6E-23 1.3E-27 215.4 28.1 289 37-358 504-824 (993)
47 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.8E-23 1.5E-27 197.6 24.2 255 67-359 12-280 (361)
48 TIGR01814 kynureninase kynuren 99.9 7.3E-23 1.6E-27 200.4 24.1 262 65-359 36-328 (406)
49 TIGR02326 transamin_PhnW 2-ami 99.9 1.2E-22 2.5E-27 196.1 22.1 255 74-361 16-285 (363)
50 cd00615 Orn_deC_like Ornithine 99.9 4.9E-23 1.1E-27 193.0 16.0 226 97-358 61-294 (294)
51 KOG0257 Kynurenine aminotransf 99.9 9.7E-22 2.1E-26 183.3 21.4 229 41-295 18-263 (420)
52 COG0075 Serine-pyruvate aminot 99.9 9.9E-22 2.1E-26 186.0 21.3 241 89-361 32-286 (383)
53 PRK13479 2-aminoethylphosphona 99.9 1.8E-21 3.9E-26 188.1 20.8 238 92-361 34-286 (368)
54 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4E-21 8.7E-26 184.3 22.2 256 68-361 10-280 (355)
55 PRK12566 glycine dehydrogenase 99.9 1.6E-20 3.5E-25 193.9 26.4 297 36-358 478-793 (954)
56 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.3E-20 5.1E-25 180.5 26.2 227 98-361 54-289 (370)
57 PTZ00094 serine hydroxymethylt 99.9 1E-20 2.2E-25 187.5 23.2 257 67-361 45-324 (452)
58 PRK13238 tnaA tryptophanase/L- 99.9 7.2E-21 1.6E-25 188.0 21.4 271 53-361 34-337 (460)
59 TIGR01437 selA_rel uncharacter 99.9 2.8E-20 6.1E-25 179.3 21.9 246 67-362 24-285 (363)
60 PLN00175 aminotransferase fami 99.9 6.1E-20 1.3E-24 180.0 24.2 269 55-360 54-333 (413)
61 cd06502 TA_like Low-specificit 99.9 1E-20 2.2E-25 180.4 16.8 252 62-361 4-269 (338)
62 PLN02724 Molybdenum cofactor s 99.9 7.5E-20 1.6E-24 192.5 24.7 272 62-360 40-360 (805)
63 cd00609 AAT_like Aspartate ami 99.9 1.7E-19 3.7E-24 172.0 23.6 260 70-363 14-282 (350)
64 PRK06108 aspartate aminotransf 99.9 1.2E-19 2.7E-24 176.0 22.8 265 58-359 27-305 (382)
65 PRK12414 putative aminotransfe 99.8 3.2E-19 7E-24 173.4 24.6 268 57-360 31-308 (384)
66 PLN02656 tyrosine transaminase 99.8 4.9E-19 1.1E-23 173.5 25.9 275 53-361 29-324 (409)
67 PRK08361 aspartate aminotransf 99.8 1.6E-19 3.5E-24 175.9 22.0 264 58-359 36-312 (391)
68 PLN00145 tyrosine/nicotianamin 99.8 4.1E-19 8.9E-24 175.0 25.1 216 54-293 51-279 (430)
69 COG1003 GcvP Glycine cleavage 99.8 6.1E-19 1.3E-23 164.9 23.8 299 32-358 40-363 (496)
70 cd00378 SHMT Serine-glycine hy 99.8 3.4E-19 7.4E-24 174.2 23.3 278 40-361 5-300 (402)
71 PRK09082 methionine aminotrans 99.8 1.7E-19 3.8E-24 175.4 21.1 269 56-360 31-310 (386)
72 PLN00143 tyrosine/nicotianamin 99.8 1.5E-18 3.3E-23 170.0 27.1 231 39-293 15-259 (409)
73 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.2E-19 4.7E-24 174.2 20.9 249 70-361 14-276 (379)
74 PRK13355 bifunctional HTH-doma 99.8 8E-19 1.7E-23 176.9 25.7 213 53-291 144-368 (517)
75 PRK00011 glyA serine hydroxyme 99.8 4.7E-19 1E-23 174.0 23.5 254 67-361 36-304 (416)
76 TIGR01822 2am3keto_CoA 2-amino 99.8 3.6E-19 7.8E-24 173.5 22.2 262 54-361 37-314 (393)
77 PRK07337 aminotransferase; Val 99.8 5E-19 1.1E-23 172.3 23.1 264 58-361 33-308 (388)
78 PRK08363 alanine aminotransfer 99.8 7.9E-19 1.7E-23 171.5 24.2 214 53-291 28-252 (398)
79 PRK08861 cystathionine gamma-s 99.8 1.8E-19 3.8E-24 174.5 19.1 220 91-367 53-278 (388)
80 PRK07324 transaminase; Validat 99.8 4.7E-19 1E-23 171.6 21.7 221 39-290 8-236 (373)
81 PRK03080 phosphoserine aminotr 99.8 1.5E-19 3.1E-24 175.4 18.1 254 65-362 20-294 (378)
82 PLN02721 threonine aldolase 99.8 2.8E-19 6E-24 171.6 19.9 200 60-295 10-224 (353)
83 PRK05764 aspartate aminotransf 99.8 1.8E-18 3.9E-23 168.6 25.7 266 56-359 32-311 (393)
84 PRK08960 hypothetical protein; 99.8 1.2E-18 2.5E-23 169.7 23.9 210 56-291 33-249 (387)
85 PRK06207 aspartate aminotransf 99.8 2E-18 4.3E-23 169.0 25.6 213 56-291 40-266 (405)
86 PRK08912 hypothetical protein; 99.8 1.4E-18 3.1E-23 169.0 24.2 214 56-291 27-247 (387)
87 PRK07681 aspartate aminotransf 99.8 4.4E-18 9.5E-23 166.3 26.9 269 55-361 32-314 (399)
88 PRK07682 hypothetical protein; 99.8 1.2E-18 2.6E-23 169.0 22.4 268 57-361 22-301 (378)
89 PRK05942 aspartate aminotransf 99.8 2.7E-18 5.8E-23 167.5 24.7 272 54-360 34-317 (394)
90 PRK09028 cystathionine beta-ly 99.8 7.6E-19 1.6E-23 170.0 20.3 220 90-367 60-285 (394)
91 TIGR03537 DapC succinyldiamino 99.8 2.3E-18 4.9E-23 165.4 23.3 199 69-290 15-220 (350)
92 PRK08134 O-acetylhomoserine am 99.8 2.7E-18 5.9E-23 168.5 24.1 231 91-367 64-321 (433)
93 cd00617 Tnase_like Tryptophana 99.8 1.1E-18 2.5E-23 170.4 21.3 253 70-361 32-312 (431)
94 PLN02187 rooty/superroot1 99.8 3.6E-18 7.7E-23 169.6 24.9 273 55-362 66-360 (462)
95 PLN03226 serine hydroxymethylt 99.8 3.1E-18 6.8E-23 169.7 24.3 264 67-361 45-335 (475)
96 PLN02271 serine hydroxymethylt 99.8 2.2E-18 4.7E-23 169.3 22.8 264 67-361 159-456 (586)
97 TIGR01324 cysta_beta_ly_B cyst 99.8 5.9E-19 1.3E-23 170.5 18.7 219 91-367 50-274 (377)
98 PRK06290 aspartate aminotransf 99.8 9.2E-18 2E-22 164.4 27.2 270 54-361 43-325 (410)
99 PRK07504 O-succinylhomoserine 99.8 1.2E-18 2.7E-23 169.7 20.9 220 91-366 65-289 (398)
100 PRK07777 aminotransferase; Val 99.8 5.6E-18 1.2E-22 164.9 25.1 213 56-291 25-247 (387)
101 PRK05957 aspartate aminotransf 99.8 4.9E-18 1.1E-22 165.4 24.3 268 56-360 28-307 (389)
102 PRK07683 aminotransferase A; V 99.8 6E-18 1.3E-22 164.7 24.5 266 58-360 31-307 (387)
103 TIGR03588 PseC UDP-4-keto-6-de 99.8 3.2E-18 6.9E-23 166.2 22.1 187 70-295 10-202 (380)
104 cd00611 PSAT_like Phosphoserin 99.8 3.4E-19 7.3E-24 171.4 14.7 260 65-361 7-281 (355)
105 TIGR03540 DapC_direct LL-diami 99.8 1.4E-17 3.1E-22 161.7 26.3 267 56-360 30-311 (383)
106 PRK08045 cystathionine gamma-s 99.8 1.4E-18 3E-23 168.5 19.0 220 91-367 52-277 (386)
107 PRK09276 LL-diaminopimelate am 99.8 1.7E-17 3.7E-22 161.3 26.7 269 55-360 31-313 (385)
108 TIGR03538 DapC_gpp succinyldia 99.8 1E-17 2.2E-22 163.4 25.1 220 54-291 27-259 (393)
109 cd06454 KBL_like KBL_like; thi 99.8 3.4E-18 7.4E-23 163.7 21.3 248 69-361 17-275 (349)
110 PLN02368 alanine transaminase 99.8 7E-18 1.5E-22 164.6 23.6 201 68-290 82-306 (407)
111 PRK07050 cystathionine beta-ly 99.8 1.3E-18 2.8E-23 169.3 18.2 219 91-367 65-290 (394)
112 PRK08776 cystathionine gamma-s 99.8 2.5E-18 5.5E-23 167.6 20.3 214 99-367 64-285 (405)
113 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 6.2E-19 1.3E-23 169.5 15.5 225 97-358 68-316 (417)
114 PRK08133 O-succinylhomoserine 99.8 1.9E-18 4.1E-23 168.0 19.1 213 99-367 65-285 (390)
115 PRK08574 cystathionine gamma-s 99.8 1.8E-18 3.8E-23 167.8 18.8 220 90-367 52-277 (385)
116 PF02347 GDC-P: Glycine cleava 99.8 2.2E-17 4.7E-22 158.8 25.9 306 12-359 21-364 (429)
117 PRK07179 hypothetical protein; 99.8 5.7E-18 1.2E-22 165.9 22.5 250 68-361 69-324 (407)
118 PRK07309 aromatic amino acid a 99.8 1.1E-17 2.4E-22 163.0 24.3 211 57-291 32-252 (391)
119 PRK08068 transaminase; Reviewe 99.8 1.6E-17 3.4E-22 161.8 25.3 269 56-361 33-315 (389)
120 PRK09147 succinyldiaminopimela 99.8 1.4E-17 3E-22 162.6 24.9 217 54-291 28-260 (396)
121 PTZ00433 tyrosine aminotransfe 99.8 1.4E-17 3E-22 163.4 25.0 215 53-292 31-265 (412)
122 PRK07550 hypothetical protein; 99.8 2E-17 4.2E-22 161.0 25.8 230 39-291 14-251 (386)
123 COG0399 WecE Predicted pyridox 99.8 6.6E-18 1.4E-22 160.2 21.6 249 69-361 14-270 (374)
124 PLN02509 cystathionine beta-ly 99.8 2.1E-18 4.6E-23 169.9 18.9 218 96-367 134-357 (464)
125 TIGR01329 cysta_beta_ly_E cyst 99.8 2E-18 4.4E-23 167.2 18.5 214 98-367 50-271 (378)
126 PRK05613 O-acetylhomoserine am 99.8 5E-18 1.1E-22 166.6 21.3 230 99-367 73-330 (437)
127 PRK07811 cystathionine gamma-s 99.8 3.3E-18 7.1E-23 166.3 19.7 217 91-366 61-285 (388)
128 TIGR01265 tyr_nico_aTase tyros 99.8 3.5E-17 7.6E-22 160.1 26.9 215 54-293 30-258 (403)
129 cd00614 CGS_like CGS_like: Cys 99.8 3.5E-18 7.6E-23 165.2 19.4 219 90-366 39-264 (369)
130 PRK07810 O-succinylhomoserine 99.8 3.6E-18 7.7E-23 166.6 19.5 221 90-367 69-295 (403)
131 PRK08249 cystathionine gamma-s 99.8 4.9E-18 1.1E-22 165.3 20.2 220 90-367 63-288 (398)
132 KOG0259 Tyrosine aminotransfer 99.8 9.3E-18 2E-22 154.5 20.7 216 56-295 62-290 (447)
133 PRK08114 cystathionine beta-ly 99.8 1.9E-18 4E-23 166.9 16.8 220 90-367 61-288 (395)
134 PRK06939 2-amino-3-ketobutyrat 99.8 1.1E-17 2.5E-22 162.9 22.4 264 54-361 41-318 (397)
135 TIGR01328 met_gam_lyase methio 99.8 7.3E-18 1.6E-22 163.9 20.8 219 91-367 59-285 (391)
136 TIGR02080 O_succ_thio_ly O-suc 99.8 5.2E-18 1.1E-22 164.4 19.3 219 91-367 51-276 (382)
137 PRK08064 cystathionine beta-ly 99.8 4.9E-18 1.1E-22 165.1 19.0 217 91-367 54-278 (390)
138 PRK08248 O-acetylhomoserine am 99.8 1.2E-17 2.7E-22 163.9 21.9 232 90-367 63-321 (431)
139 PRK06234 methionine gamma-lyas 99.8 7.2E-18 1.6E-22 164.5 19.8 224 89-367 62-292 (400)
140 cd00616 AHBA_syn 3-amino-5-hyd 99.8 9.1E-18 2E-22 161.0 20.0 243 74-360 3-252 (352)
141 PRK13580 serine hydroxymethylt 99.8 1.6E-17 3.4E-22 162.6 21.6 264 67-361 60-360 (493)
142 TIGR01141 hisC histidinol-phos 99.8 9E-18 2E-22 160.9 19.6 253 58-359 22-280 (346)
143 PTZ00377 alanine aminotransfer 99.8 4.1E-17 8.8E-22 163.2 24.9 200 70-291 91-315 (481)
144 cd01494 AAT_I Aspartate aminot 99.8 3.4E-18 7.5E-23 145.8 14.8 164 99-291 4-170 (170)
145 PRK07366 succinyldiaminopimela 99.8 5.6E-17 1.2E-21 157.9 24.8 215 53-290 28-253 (388)
146 PRK06348 aspartate aminotransf 99.8 3.5E-17 7.6E-22 159.2 23.2 210 58-291 32-249 (384)
147 PRK07503 methionine gamma-lyas 99.8 1.3E-17 2.9E-22 162.7 20.3 220 91-366 65-290 (403)
148 PRK13034 serine hydroxymethylt 99.8 3.7E-17 8.1E-22 160.3 23.5 278 40-361 14-307 (416)
149 PRK06767 methionine gamma-lyas 99.8 2.2E-17 4.7E-22 160.5 21.3 219 90-366 60-285 (386)
150 PRK07671 cystathionine beta-ly 99.8 8.8E-18 1.9E-22 162.6 18.4 219 91-367 50-274 (377)
151 KOG2862 Alanine-glyoxylate ami 99.8 5.3E-17 1.1E-21 145.9 21.8 260 70-361 26-303 (385)
152 PRK05939 hypothetical protein; 99.8 2.9E-17 6.4E-22 159.8 21.8 233 91-367 47-292 (397)
153 PRK09265 aminotransferase AlaT 99.8 6.2E-17 1.3E-21 158.4 24.3 210 54-291 32-255 (404)
154 PRK05355 3-phosphoserine/phosp 99.8 7.9E-18 1.7E-22 161.9 17.4 259 64-362 10-284 (360)
155 TIGR01264 tyr_amTase_E tyrosin 99.8 1.3E-16 2.9E-21 155.9 26.4 210 58-292 34-256 (401)
156 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.5E-17 3.3E-22 161.3 19.5 217 91-366 54-277 (380)
157 PRK07812 O-acetylhomoserine am 99.8 4.6E-17 1E-21 159.7 22.1 232 91-367 69-325 (436)
158 PRK05367 glycine dehydrogenase 99.8 1.1E-16 2.5E-21 169.0 26.4 308 12-360 32-374 (954)
159 PRK05994 O-acetylhomoserine am 99.8 6.3E-17 1.4E-21 159.0 22.9 228 91-367 63-320 (427)
160 PRK06107 aspartate aminotransf 99.8 7.8E-17 1.7E-21 157.6 23.4 268 55-359 33-314 (402)
161 PRK08056 threonine-phosphate d 99.8 5.2E-17 1.1E-21 156.3 21.1 255 56-360 21-284 (356)
162 PRK14807 histidinol-phosphate 99.8 1.2E-16 2.5E-21 153.6 23.4 250 60-359 27-282 (351)
163 PRK06836 aspartate aminotransf 99.8 8.5E-17 1.8E-21 157.0 22.6 217 58-292 36-260 (394)
164 TIGR02379 ECA_wecE TDP-4-keto- 99.8 6.9E-17 1.5E-21 156.3 21.5 189 70-296 11-200 (376)
165 PRK06084 O-acetylhomoserine am 99.8 1.1E-16 2.3E-21 157.1 22.8 233 91-367 58-316 (425)
166 PRK07269 cystathionine gamma-s 99.8 2.3E-17 4.9E-22 158.8 17.7 220 90-367 53-276 (364)
167 PRK09148 aminotransferase; Val 99.8 3.8E-16 8.2E-21 152.9 26.5 273 53-361 28-313 (405)
168 PRK06702 O-acetylhomoserine am 99.8 5.7E-17 1.2E-21 158.4 20.3 233 90-367 60-318 (432)
169 PRK05967 cystathionine beta-ly 99.8 2.6E-17 5.7E-22 159.1 17.8 218 96-367 65-288 (395)
170 PLN02414 glycine dehydrogenase 99.8 1.5E-16 3.2E-21 167.5 24.6 306 12-360 57-402 (993)
171 PRK06176 cystathionine gamma-s 99.8 3E-17 6.6E-22 158.9 17.8 217 91-367 50-274 (380)
172 PRK09105 putative aminotransfe 99.8 9.1E-17 2E-21 155.4 21.1 244 67-361 56-304 (370)
173 PRK05968 hypothetical protein; 99.8 7.5E-17 1.6E-21 156.8 20.4 214 91-365 63-285 (389)
174 PRK05387 histidinol-phosphate 99.8 9E-17 2E-21 154.4 20.5 254 58-361 27-285 (353)
175 PRK06855 aminotransferase; Val 99.8 2.3E-16 5.1E-21 155.7 23.9 212 55-291 32-258 (433)
176 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.9E-17 1.3E-21 156.4 19.1 248 70-362 5-263 (363)
177 PRK06460 hypothetical protein; 99.7 5.1E-17 1.1E-21 157.3 18.4 218 90-367 44-269 (376)
178 PRK07568 aspartate aminotransf 99.7 3.8E-16 8.2E-21 152.5 24.7 264 57-360 32-309 (397)
179 PRK08636 aspartate aminotransf 99.7 4.2E-16 9.2E-21 152.5 25.0 211 57-290 35-262 (403)
180 TIGR01364 serC_1 phosphoserine 99.7 3.7E-17 8E-22 156.6 16.9 250 69-360 4-271 (349)
181 PRK04311 selenocysteine syntha 99.7 2E-16 4.4E-21 155.9 22.5 194 67-292 97-307 (464)
182 TIGR01366 serC_3 phosphoserine 99.7 4.6E-17 9.9E-22 156.8 17.5 254 67-362 13-283 (361)
183 PRK03158 histidinol-phosphate 99.7 8.9E-17 1.9E-21 154.8 19.4 247 68-360 43-293 (359)
184 PLN02231 alanine transaminase 99.7 2.2E-16 4.7E-21 158.9 22.3 210 58-291 132-367 (534)
185 PLN02242 methionine gamma-lyas 99.7 3.6E-17 7.9E-22 160.1 16.3 214 90-360 75-298 (418)
186 TIGR01825 gly_Cac_T_rel pyrido 99.7 2.2E-16 4.8E-21 153.4 21.7 262 54-361 32-306 (385)
187 PRK06225 aspartate aminotransf 99.7 8.9E-17 1.9E-21 156.1 18.9 203 57-291 30-240 (380)
188 PRK05958 8-amino-7-oxononanoat 99.7 3.4E-16 7.3E-21 151.9 22.8 247 68-360 54-311 (385)
189 PRK04870 histidinol-phosphate 99.7 1.4E-16 3E-21 153.4 19.8 244 67-360 39-288 (356)
190 COG0112 GlyA Glycine/serine hy 99.7 1.5E-16 3.3E-21 147.9 19.0 253 68-361 38-305 (413)
191 PRK03317 histidinol-phosphate 99.7 2E-16 4.4E-21 152.9 20.7 199 67-291 39-243 (368)
192 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 3.8E-16 8.2E-21 153.3 21.9 227 91-367 57-313 (418)
193 TIGR00858 bioF 8-amino-7-oxono 99.7 5.8E-16 1.3E-20 148.7 22.8 248 68-361 31-290 (360)
194 PRK01533 histidinol-phosphate 99.7 2E-16 4.4E-21 152.7 19.4 259 56-360 30-293 (366)
195 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.5E-16 5.5E-21 152.1 19.8 253 69-361 49-330 (450)
196 PRK07582 cystathionine gamma-l 99.7 1.3E-16 2.7E-21 154.0 17.7 216 90-366 50-271 (366)
197 PLN02450 1-aminocyclopropane-1 99.7 2.2E-16 4.7E-21 157.1 19.7 237 87-361 82-349 (468)
198 PLN03026 histidinol-phosphate 99.7 6.5E-16 1.4E-20 150.0 22.6 255 56-362 53-313 (380)
199 PRK08247 cystathionine gamma-s 99.7 1.6E-16 3.5E-21 153.4 17.6 214 91-364 52-273 (366)
200 PRK15481 transcriptional regul 99.7 3.3E-16 7.3E-21 154.6 19.9 258 59-361 89-358 (431)
201 PF00464 SHMT: Serine hydroxym 99.7 4.9E-16 1.1E-20 148.9 19.8 262 68-361 32-321 (399)
202 PRK15029 arginine decarboxylas 99.7 3E-16 6.6E-21 161.1 19.4 228 97-360 207-465 (755)
203 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 9.5E-16 2.1E-20 148.6 21.7 185 71-295 12-198 (375)
204 COG1103 Archaea-specific pyrid 99.7 2.8E-15 6E-20 132.5 22.3 228 101-364 67-303 (382)
205 PRK09275 aspartate aminotransf 99.7 3.5E-16 7.7E-21 155.8 18.5 215 59-293 104-328 (527)
206 PRK09257 aromatic amino acid a 99.7 6.3E-16 1.4E-20 151.0 19.9 215 57-290 28-260 (396)
207 PRK08175 aminotransferase; Val 99.7 4.6E-15 1E-19 144.8 26.0 209 56-290 30-251 (395)
208 PRK15407 lipopolysaccharide bi 99.7 1.8E-15 3.8E-20 149.1 22.9 177 90-295 62-238 (438)
209 PLN02672 methionine S-methyltr 99.7 6.9E-16 1.5E-20 163.0 21.1 213 54-293 696-927 (1082)
210 PRK07590 L,L-diaminopimelate a 99.7 1.8E-15 4E-20 148.3 22.8 222 39-291 17-264 (409)
211 PRK05166 histidinol-phosphate 99.7 8E-16 1.7E-20 148.9 19.9 258 58-361 39-304 (371)
212 PLN02376 1-aminocyclopropane-1 99.7 8.6E-16 1.9E-20 153.6 20.6 181 87-293 90-296 (496)
213 PTZ00376 aspartate aminotransf 99.7 3.1E-16 6.8E-21 153.5 17.1 214 57-289 31-264 (404)
214 PRK00950 histidinol-phosphate 99.7 7.7E-16 1.7E-20 148.3 19.6 200 56-291 35-238 (361)
215 PRK02731 histidinol-phosphate 99.7 1.4E-15 3E-20 146.9 21.1 257 57-361 34-297 (367)
216 PRK13392 5-aminolevulinate syn 99.7 1.9E-15 4.2E-20 148.2 22.1 255 64-361 57-321 (410)
217 PRK03321 putative aminotransfe 99.7 7.6E-16 1.7E-20 148.0 18.6 192 68-291 36-231 (352)
218 TIGR00461 gcvP glycine dehydro 99.7 6.9E-15 1.5E-19 153.4 26.6 309 12-361 20-363 (939)
219 TIGR00474 selA seryl-tRNA(sec) 99.7 1.9E-15 4.1E-20 148.7 21.1 194 67-292 92-302 (454)
220 PRK02610 histidinol-phosphate 99.7 2.7E-15 5.8E-20 145.4 21.7 197 67-290 41-248 (374)
221 PRK05839 hypothetical protein; 99.7 1.1E-14 2.4E-19 141.1 25.3 211 54-291 23-247 (374)
222 TIGR03801 asp_4_decarbox aspar 99.7 8.4E-16 1.8E-20 152.9 17.4 215 59-292 98-326 (521)
223 COG2008 GLY1 Threonine aldolas 99.7 8.7E-16 1.9E-20 141.9 16.1 246 67-359 11-271 (342)
224 PRK06434 cystathionine gamma-l 99.7 9.9E-16 2.2E-20 148.0 17.3 215 90-367 63-286 (384)
225 PRK13237 tyrosine phenol-lyase 99.7 4.4E-15 9.5E-20 143.9 20.9 233 87-361 74-337 (460)
226 COG1168 MalY Bifunctional PLP- 99.7 6.8E-15 1.5E-19 136.5 21.0 255 68-359 39-307 (388)
227 PLN02607 1-aminocyclopropane-1 99.7 2.6E-15 5.6E-20 148.4 19.6 182 89-293 93-296 (447)
228 PRK05937 8-amino-7-oxononanoat 99.7 4.3E-15 9.3E-20 143.8 20.8 224 92-359 53-284 (370)
229 PRK06358 threonine-phosphate d 99.7 5.4E-15 1.2E-19 142.3 21.1 241 68-359 33-284 (354)
230 PRK10534 L-threonine aldolase; 99.7 1.1E-15 2.4E-20 145.7 16.1 244 68-361 12-268 (333)
231 TIGR01821 5aminolev_synth 5-am 99.7 1.1E-14 2.3E-19 142.6 23.1 252 65-361 57-320 (402)
232 PF01212 Beta_elim_lyase: Beta 99.7 1.2E-16 2.5E-21 148.6 8.6 249 68-362 7-273 (290)
233 PRK01688 histidinol-phosphate 99.7 7.2E-16 1.6E-20 148.2 14.2 166 98-291 60-228 (351)
234 COG0079 HisC Histidinol-phosph 99.7 1.1E-14 2.4E-19 139.3 21.9 241 67-360 35-283 (356)
235 PRK04635 histidinol-phosphate 99.7 1.1E-15 2.3E-20 147.1 15.0 220 92-361 61-288 (354)
236 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 6.8E-15 1.5E-19 141.9 20.4 221 91-367 55-282 (386)
237 PRK03967 histidinol-phosphate 99.7 9.2E-15 2E-19 139.7 21.1 186 67-291 31-219 (337)
238 PLN02397 aspartate transaminas 99.7 4.2E-15 9.1E-20 146.3 19.2 212 58-289 51-282 (423)
239 PRK07908 hypothetical protein; 99.7 1E-14 2.3E-19 140.0 21.2 190 59-291 26-219 (349)
240 PRK07865 N-succinyldiaminopime 99.7 1.2E-14 2.6E-19 140.3 21.8 269 42-361 14-297 (364)
241 PF00155 Aminotran_1_2: Aminot 99.7 6.7E-15 1.5E-19 141.8 19.9 186 83-291 36-236 (363)
242 PRK14809 histidinol-phosphate 99.7 1.6E-14 3.4E-19 139.1 22.3 202 57-291 32-237 (357)
243 PRK08153 histidinol-phosphate 99.7 1.1E-14 2.3E-19 141.0 21.0 253 59-361 36-295 (369)
244 COG2873 MET17 O-acetylhomoseri 99.7 9.9E-15 2.2E-19 134.6 19.3 230 90-363 61-315 (426)
245 COG0403 GcvP Glycine cleavage 99.7 5.5E-14 1.2E-18 132.0 24.5 314 12-360 29-379 (450)
246 TIGR01365 serC_2 phosphoserine 99.7 3.2E-15 7E-20 143.6 16.7 236 89-362 33-285 (374)
247 TIGR03576 pyridox_MJ0158 pyrid 99.7 3.6E-14 7.8E-19 135.8 23.4 204 40-292 8-218 (346)
248 TIGR03539 DapC_actino succinyl 99.6 3E-14 6.4E-19 137.3 22.6 269 40-360 7-290 (357)
249 PRK09064 5-aminolevulinate syn 99.6 4.4E-14 9.6E-19 138.4 23.4 254 64-361 57-321 (407)
250 PRK07392 threonine-phosphate d 99.6 3.4E-14 7.4E-19 137.0 21.9 242 67-360 35-287 (360)
251 PRK07049 methionine gamma-lyas 99.6 1.7E-14 3.7E-19 141.8 19.9 227 90-367 82-319 (427)
252 PRK13393 5-aminolevulinate syn 99.6 6E-14 1.3E-18 137.5 23.6 251 67-361 59-320 (406)
253 PRK14808 histidinol-phosphate 99.6 4E-14 8.7E-19 135.2 20.7 193 58-291 22-217 (335)
254 TIGR01140 L_thr_O3P_dcar L-thr 99.6 2E-14 4.3E-19 137.0 17.6 209 99-362 51-267 (330)
255 PRK13578 ornithine decarboxyla 99.6 1.2E-14 2.6E-19 148.1 16.8 227 98-362 177-442 (720)
256 PLN02483 serine palmitoyltrans 99.6 8.8E-14 1.9E-18 139.0 22.5 224 94-361 145-390 (489)
257 TIGR03542 DAPAT_plant LL-diami 99.6 1.4E-13 3E-18 134.8 23.3 203 56-292 34-262 (402)
258 PLN02822 serine palmitoyltrans 99.6 5.5E-14 1.2E-18 140.2 20.7 268 54-359 108-387 (481)
259 KOG1368 Threonine aldolase [Am 99.6 9E-15 2E-19 130.9 12.9 248 67-361 33-296 (384)
260 PRK08637 hypothetical protein; 99.6 3.4E-14 7.4E-19 138.4 17.6 200 70-292 23-243 (388)
261 PLN03227 serine palmitoyltrans 99.6 8.9E-14 1.9E-18 135.5 20.5 245 67-360 12-282 (392)
262 PRK09440 avtA valine--pyruvate 99.6 1.9E-13 4.1E-18 134.4 22.8 213 57-290 32-262 (416)
263 PRK04781 histidinol-phosphate 99.6 7.6E-14 1.7E-18 134.8 19.0 168 99-291 63-235 (364)
264 PRK12566 glycine dehydrogenase 99.6 4.4E-13 9.5E-18 139.3 24.4 302 12-360 35-376 (954)
265 PRK08354 putative aminotransfe 99.6 7.9E-14 1.7E-18 131.8 17.5 171 69-290 22-196 (311)
266 cd00610 OAT_like Acetyl ornith 99.6 4.1E-13 9E-18 131.6 22.6 256 68-360 53-333 (413)
267 COG0626 MetC Cystathionine bet 99.6 1.4E-13 3E-18 131.7 18.2 221 90-367 62-290 (396)
268 PRK15400 lysine decarboxylase 99.6 5.7E-14 1.2E-18 143.1 16.1 224 98-361 198-444 (714)
269 KOG0053 Cystathionine beta-lya 99.6 9.5E-14 2.1E-18 131.4 16.0 220 91-367 77-302 (409)
270 PRK15399 lysine decarboxylase 99.6 2.4E-13 5.2E-18 138.5 19.6 225 98-361 198-444 (713)
271 PRK00854 rocD ornithine--oxo-a 99.6 1.3E-12 2.7E-17 127.9 23.9 252 68-361 58-329 (401)
272 PRK12462 phosphoserine aminotr 99.5 4E-13 8.6E-18 128.1 19.0 257 65-363 12-288 (364)
273 TIGR00707 argD acetylornithine 99.5 1.1E-12 2.5E-17 127.1 22.3 255 68-360 44-310 (379)
274 PRK06425 histidinol-phosphate 99.5 3E-13 6.5E-18 129.0 17.1 160 99-291 44-208 (332)
275 PRK03244 argD acetylornithine 99.5 1.7E-12 3.6E-17 126.9 22.7 246 69-360 61-323 (398)
276 PLN02452 phosphoserine transam 99.5 4.1E-13 8.8E-18 129.0 17.8 256 65-361 15-288 (365)
277 PRK05664 threonine-phosphate d 99.5 1.5E-12 3.4E-17 124.0 19.0 204 99-361 53-264 (330)
278 COG0156 BioF 7-keto-8-aminopel 99.5 3.7E-12 8.1E-17 122.0 21.4 248 68-363 54-317 (388)
279 KOG0256 1-aminocyclopropane-1- 99.5 2.4E-12 5.3E-17 120.0 17.9 183 90-295 120-322 (471)
280 PRK07505 hypothetical protein; 99.5 9.5E-12 2.1E-16 121.8 22.9 196 67-292 60-264 (402)
281 COG1167 ARO8 Transcriptional r 99.4 2.1E-11 4.5E-16 121.1 23.3 196 70-291 107-313 (459)
282 PRK06959 putative threonine-ph 99.4 5.6E-12 1.2E-16 120.6 17.7 206 99-361 57-270 (339)
283 PRK04073 rocD ornithine--oxo-a 99.4 2.8E-11 6.1E-16 118.2 22.8 254 67-360 56-327 (396)
284 PRK02627 acetylornithine amino 99.4 3.2E-11 6.8E-16 117.7 22.3 198 69-292 57-266 (396)
285 COG1982 LdcC Arginine/lysine/o 99.4 5E-12 1.1E-16 124.3 16.2 229 98-363 73-316 (557)
286 PRK01278 argD acetylornithine 99.4 4.2E-11 9.2E-16 116.7 22.7 255 68-359 48-314 (389)
287 PLN02955 8-amino-7-oxononanoat 99.4 3.3E-11 7.1E-16 118.2 21.4 256 67-355 116-386 (476)
288 COG3844 Kynureninase [Amino ac 99.4 4E-11 8.6E-16 109.1 20.1 234 92-361 73-327 (407)
289 TIGR02617 tnaA_trp_ase tryptop 99.4 1.3E-11 2.9E-16 118.6 17.7 259 68-361 55-346 (467)
290 KOG2467 Glycine/serine hydroxy 99.4 3.6E-11 7.8E-16 110.7 19.1 264 68-361 52-342 (477)
291 PTZ00125 ornithine aminotransf 99.4 5.5E-11 1.2E-15 116.3 21.4 258 68-359 48-318 (400)
292 KOG2040 Glycine dehydrogenase 99.4 3.4E-11 7.4E-16 117.8 17.8 247 83-358 569-835 (1001)
293 PF05889 SLA_LP_auto_ag: Solub 99.4 1.6E-11 3.6E-16 115.8 14.9 230 94-358 55-293 (389)
294 TIGR01885 Orn_aminotrans ornit 99.3 5.5E-10 1.2E-14 109.3 24.6 253 68-360 54-327 (401)
295 PRK02936 argD acetylornithine 99.3 4.4E-10 9.5E-15 109.1 21.3 195 67-291 45-250 (377)
296 COG4992 ArgD Ornithine/acetylo 99.3 4.6E-10 9.9E-15 106.3 20.5 245 67-359 58-323 (404)
297 PRK03715 argD acetylornithine 99.3 1.1E-09 2.5E-14 106.8 23.9 251 69-359 54-317 (395)
298 TIGR03246 arg_catab_astC succi 99.3 9.8E-10 2.1E-14 107.4 23.0 250 68-360 52-319 (397)
299 KOG0634 Aromatic amino acid am 99.3 3.9E-10 8.5E-15 106.2 17.5 221 85-343 94-350 (472)
300 PLN02624 ornithine-delta-amino 99.2 2.2E-09 4.7E-14 107.2 23.8 253 67-359 91-364 (474)
301 PRK05093 argD bifunctional N-s 99.2 4.2E-09 9.2E-14 103.2 23.3 251 67-360 56-324 (403)
302 KOG0258 Alanine aminotransfera 99.2 3.1E-10 6.7E-15 105.5 14.0 160 72-252 91-262 (475)
303 TIGR00713 hemL glutamate-1-sem 99.2 1.7E-09 3.6E-14 106.7 20.3 192 67-292 64-278 (423)
304 KOG1360 5-aminolevulinate synt 99.2 1.3E-09 2.8E-14 101.6 17.5 250 67-361 185-448 (570)
305 COG1921 SelA Selenocysteine sy 99.2 3.4E-09 7.3E-14 100.3 19.9 221 69-337 40-271 (395)
306 PRK12381 bifunctional succinyl 99.1 1.1E-08 2.3E-13 100.4 22.4 255 68-360 56-323 (406)
307 COG3977 Alanine-alpha-ketoisov 99.1 2E-09 4.4E-14 97.0 15.0 229 39-291 16-263 (417)
308 PRK04260 acetylornithine amino 99.1 1.6E-08 3.5E-13 98.1 21.3 244 69-358 46-303 (375)
309 PLN02760 4-aminobutyrate:pyruv 99.0 1E-07 2.3E-12 95.6 23.7 267 67-359 105-407 (504)
310 PRK04612 argD acetylornithine 99.0 1.2E-07 2.6E-12 92.9 23.2 259 67-359 56-326 (408)
311 PRK00062 glutamate-1-semialdeh 99.0 4.2E-08 9.1E-13 96.8 19.4 245 67-358 66-337 (426)
312 PRK05964 adenosylmethionine--8 99.0 1.6E-07 3.5E-12 92.6 23.5 266 67-359 58-346 (423)
313 PRK12403 putative aminotransfe 99.0 8.9E-08 1.9E-12 95.3 21.5 261 67-358 70-366 (460)
314 PRK08360 4-aminobutyrate amino 99.0 2.3E-07 5.1E-12 91.8 24.2 253 67-359 57-343 (443)
315 PRK08117 4-aminobutyrate amino 99.0 1.8E-07 3.8E-12 92.6 23.4 252 67-359 59-346 (433)
316 COG0001 HemL Glutamate-1-semia 99.0 1.3E-07 2.9E-12 90.6 21.1 188 67-292 69-283 (432)
317 PF06838 Met_gamma_lyase: Meth 99.0 3E-08 6.4E-13 92.4 16.0 168 92-296 55-242 (403)
318 PRK04013 argD acetylornithine/ 98.9 1.2E-07 2.6E-12 91.3 20.1 189 67-292 40-245 (364)
319 COG0160 GabT 4-aminobutyrate a 98.9 5.8E-07 1.3E-11 87.6 24.6 253 67-359 72-360 (447)
320 TIGR03372 putres_am_tran putre 98.9 3.4E-07 7.4E-12 90.4 23.2 251 67-359 91-366 (442)
321 PF03841 SelA: L-seryl-tRNA se 98.9 1.4E-09 3.1E-14 102.1 5.9 162 99-292 51-227 (367)
322 PRK06058 4-aminobutyrate amino 98.9 3.3E-07 7.1E-12 90.9 23.1 254 67-359 72-358 (443)
323 PRK06541 hypothetical protein; 98.9 4E-07 8.6E-12 90.6 23.4 262 67-359 68-365 (460)
324 PRK11522 putrescine--2-oxoglut 98.9 3.4E-07 7.3E-12 91.0 22.4 249 67-359 98-373 (459)
325 TIGR02407 ectoine_ectB diamino 98.9 7.2E-07 1.6E-11 87.7 24.6 255 67-358 51-333 (412)
326 COG1448 TyrB Aspartate/tyrosin 98.9 5.2E-08 1.1E-12 91.2 15.2 292 47-359 17-332 (396)
327 PRK07482 hypothetical protein; 98.9 5E-07 1.1E-11 90.0 23.2 267 67-358 66-366 (461)
328 PRK12389 glutamate-1-semialdeh 98.9 3.5E-07 7.5E-12 90.3 21.9 250 67-358 69-340 (428)
329 PRK05769 4-aminobutyrate amino 98.9 9.3E-07 2E-11 87.5 24.6 251 67-359 70-358 (441)
330 PLN00144 acetylornithine trans 98.9 4.8E-07 1E-11 88.0 21.9 254 67-357 31-304 (382)
331 PRK06105 aminotransferase; Pro 98.9 6E-07 1.3E-11 89.4 23.0 265 67-359 64-365 (460)
332 PRK09792 4-aminobutyrate trans 98.9 6.5E-07 1.4E-11 88.2 23.0 254 67-358 56-336 (421)
333 PLN02482 glutamate-1-semialdeh 98.9 3.9E-07 8.5E-12 90.7 21.2 244 67-359 115-387 (474)
334 PRK13360 omega amino acid--pyr 98.8 1.2E-06 2.6E-11 86.8 24.2 266 67-360 62-363 (442)
335 PRK08088 4-aminobutyrate amino 98.8 3E-07 6.5E-12 90.7 19.9 199 67-291 57-282 (425)
336 PRK09264 diaminobutyrate--2-ox 98.8 1.3E-06 2.7E-11 86.3 24.0 256 67-359 55-338 (425)
337 PRK09221 beta alanine--pyruvat 98.8 8.4E-07 1.8E-11 87.9 22.7 264 67-359 65-365 (445)
338 PF00202 Aminotran_3: Aminotra 98.8 1.4E-06 2.9E-11 83.5 23.4 259 67-358 32-315 (339)
339 PRK05965 hypothetical protein; 98.8 1.7E-06 3.7E-11 86.1 24.6 268 67-359 62-362 (459)
340 TIGR00709 dat 2,4-diaminobutyr 98.8 1.5E-06 3.3E-11 86.1 23.6 253 67-358 55-343 (442)
341 KOG1359 Glycine C-acetyltransf 98.8 1.7E-07 3.8E-12 84.5 15.0 247 67-361 81-337 (417)
342 PRK07495 4-aminobutyrate amino 98.8 2.5E-06 5.4E-11 84.1 24.7 255 66-358 55-336 (425)
343 KOG3843 Predicted serine hydro 98.8 1.7E-08 3.6E-13 89.7 8.0 233 93-358 55-295 (432)
344 TIGR00700 GABAtrnsam 4-aminobu 98.8 1.7E-06 3.7E-11 85.3 22.8 200 67-292 49-281 (420)
345 KOG0633 Histidinol phosphate a 98.8 2.7E-08 5.8E-13 88.2 8.9 114 119-250 88-203 (375)
346 KOG1357 Serine palmitoyltransf 98.8 4.9E-08 1.1E-12 92.7 10.8 228 92-362 179-427 (519)
347 COG1932 SerC Phosphoserine ami 98.8 6E-07 1.3E-11 83.8 17.6 231 91-363 46-290 (365)
348 PRK06062 hypothetical protein; 98.8 1.9E-06 4.1E-11 85.6 22.5 252 67-358 69-356 (451)
349 PRK08593 4-aminobutyrate amino 98.8 2.6E-06 5.7E-11 84.5 23.2 252 67-358 58-345 (445)
350 PRK07481 hypothetical protein; 98.7 3.8E-06 8.2E-11 83.4 23.6 266 67-358 58-359 (449)
351 PRK06777 4-aminobutyrate amino 98.7 3.3E-06 7.2E-11 83.2 22.9 254 67-359 56-337 (421)
352 PRK06916 adenosylmethionine--8 98.7 4.2E-06 9E-11 83.4 22.7 266 66-359 71-371 (460)
353 PRK06082 4-aminobutyrate amino 98.7 6.4E-06 1.4E-10 82.0 23.9 250 67-358 87-367 (459)
354 PRK06943 adenosylmethionine--8 98.7 7.4E-06 1.6E-10 81.4 24.2 266 67-359 70-368 (453)
355 PRK07030 adenosylmethionine--8 98.7 7.3E-06 1.6E-10 81.7 23.8 267 67-359 63-362 (466)
356 TIGR00508 bioA adenosylmethion 98.7 4.6E-06 1E-10 82.3 22.1 263 67-361 61-355 (427)
357 COG3033 TnaA Tryptophanase [Am 98.7 1.2E-06 2.5E-11 81.3 16.0 240 88-361 76-348 (471)
358 PRK07036 hypothetical protein; 98.7 1.1E-05 2.4E-10 80.4 24.4 263 67-359 67-368 (466)
359 PRK07678 aminotransferase; Val 98.7 8.9E-06 1.9E-10 80.8 23.5 260 67-358 63-358 (451)
360 PRK07046 aminotransferase; Val 98.6 5.6E-06 1.2E-10 82.2 21.7 246 67-358 91-363 (453)
361 PRK07480 putative aminotransfe 98.6 9.9E-06 2.1E-10 80.6 23.5 265 67-359 66-364 (456)
362 PRK05639 4-aminobutyrate amino 98.6 8.1E-06 1.7E-10 81.2 22.8 250 67-358 69-359 (457)
363 PRK07986 adenosylmethionine--8 98.6 5.2E-06 1.1E-10 81.9 21.2 262 67-359 59-350 (428)
364 PRK06938 diaminobutyrate--2-ox 98.6 8.3E-06 1.8E-10 81.3 22.8 253 67-359 79-369 (464)
365 PRK06918 4-aminobutyrate amino 98.6 1.8E-05 4E-10 78.7 24.4 200 67-292 70-303 (451)
366 PRK00615 glutamate-1-semialdeh 98.6 9.2E-06 2E-10 80.2 21.8 250 67-358 69-341 (433)
367 PRK06917 hypothetical protein; 98.6 1.6E-05 3.4E-10 79.0 23.5 262 67-359 47-344 (447)
368 PRK06209 glutamate-1-semialdeh 98.6 5.1E-06 1.1E-10 82.1 19.8 252 67-358 64-328 (431)
369 PRK05630 adenosylmethionine--8 98.6 1.4E-05 3E-10 78.8 22.0 263 67-359 56-347 (422)
370 PRK06173 adenosylmethionine--8 98.6 1.1E-05 2.4E-10 79.5 21.1 262 67-359 60-352 (429)
371 PRK07483 hypothetical protein; 98.6 2.6E-05 5.6E-10 77.3 23.5 259 67-358 46-343 (443)
372 KOG0630 Predicted pyridoxal-de 98.5 5.6E-07 1.2E-11 86.2 10.5 185 154-357 231-431 (838)
373 PRK06148 hypothetical protein; 98.5 1.7E-05 3.6E-10 86.2 22.4 251 67-359 638-925 (1013)
374 PRK06149 hypothetical protein; 98.5 2.3E-05 4.9E-10 85.0 23.4 251 68-359 600-885 (972)
375 PRK08742 adenosylmethionine--8 98.5 6.4E-05 1.4E-09 75.1 24.0 269 67-358 80-382 (472)
376 PRK06931 diaminobutyrate--2-ox 98.5 4.7E-05 1E-09 75.8 23.0 255 67-359 74-363 (459)
377 COG0161 BioA Adenosylmethionin 98.5 1.2E-05 2.5E-10 78.3 17.9 260 67-358 60-359 (449)
378 KOG1402 Ornithine aminotransfe 98.5 2.2E-05 4.7E-10 72.3 18.5 251 68-360 76-348 (427)
379 COG4100 Cystathionine beta-lya 98.4 6E-06 1.3E-10 74.9 14.0 157 92-281 66-237 (416)
380 TIGR03251 LAT_fam L-lysine 6-t 98.4 6.6E-05 1.4E-09 74.2 20.6 266 67-358 54-357 (431)
381 TIGR00699 GABAtrns_euk 4-amino 98.3 0.00025 5.4E-09 70.5 22.3 262 67-359 74-388 (464)
382 PRK08297 L-lysine aminotransfe 98.3 8.3E-05 1.8E-09 73.8 19.0 267 67-359 61-365 (443)
383 KOG1401 Acetylornithine aminot 98.2 0.00056 1.2E-08 64.9 21.7 203 67-293 72-291 (433)
384 KOG1404 Alanine-glyoxylate ami 98.2 5.9E-05 1.3E-09 71.0 15.1 249 67-358 66-351 (442)
385 PF12897 Aminotran_MocR: Alani 98.2 0.00032 6.9E-09 66.4 19.6 174 99-291 73-268 (425)
386 KOG3846 L-kynurenine hydrolase 98.1 9.6E-05 2.1E-09 67.5 14.7 233 99-361 115-377 (465)
387 KOG1412 Aspartate aminotransfe 97.9 0.0016 3.4E-08 59.8 17.1 270 70-360 51-340 (410)
388 PLN02974 adenosylmethionine-8- 97.8 0.0044 9.5E-08 65.7 22.2 90 193-292 567-670 (817)
389 KOG2790 Phosphoserine aminotra 97.7 0.0028 6.1E-08 57.5 16.4 269 58-362 9-294 (370)
390 KOG2040 Glycine dehydrogenase 97.6 0.00082 1.8E-08 67.1 12.8 278 34-360 97-415 (1001)
391 KOG1411 Aspartate aminotransfe 97.6 0.0014 3E-08 61.0 13.3 287 48-361 44-361 (427)
392 KOG1358 Serine palmitoyltransf 97.5 0.0026 5.5E-08 60.2 14.0 191 53-279 92-306 (467)
393 PLN02994 1-aminocyclopropane-1 97.1 0.0053 1.1E-07 51.7 9.8 63 87-165 88-152 (153)
394 PF04864 Alliinase_C: Allinase 96.5 0.012 2.6E-07 55.2 8.3 170 90-295 42-213 (363)
395 KOG1403 Predicted alanine-glyo 95.6 0.32 7E-06 44.8 12.7 209 119-358 104-350 (452)
396 KOG1405 4-aminobutyrate aminot 82.4 15 0.00032 35.1 10.1 141 191-358 254-406 (484)
397 COG1105 FruK Fructose-1-phosph 70.4 26 0.00056 33.0 8.3 54 187-246 108-167 (310)
398 PLN02672 methionine S-methyltr 69.5 1E+02 0.0023 34.3 13.8 149 73-246 407-565 (1082)
399 COG2515 Acd 1-aminocyclopropan 66.8 98 0.0021 29.1 11.0 101 120-230 66-177 (323)
400 COG1954 GlpP Glycerol-3-phosph 56.6 18 0.00039 30.8 4.1 50 191-249 12-61 (181)
401 PRK14994 SAM-dependent 16S rib 53.7 1E+02 0.0023 28.7 9.1 79 155-242 39-117 (287)
402 COG0031 CysK Cysteine synthase 52.4 46 0.001 31.2 6.5 78 119-208 64-142 (300)
403 PF13407 Peripla_BP_4: Peripla 51.0 68 0.0015 28.5 7.5 65 167-243 20-85 (257)
404 cd01455 vWA_F11C1-5a_type Von 49.8 28 0.00061 30.3 4.4 35 204-244 114-148 (191)
405 PLN02556 cysteine synthase/L-3 49.8 1.1E+02 0.0024 29.6 9.0 82 120-214 114-195 (368)
406 PF02310 B12-binding: B12 bind 48.3 1E+02 0.0022 23.9 7.3 71 167-248 20-91 (121)
407 TIGR02026 BchE magnesium-proto 48.3 78 0.0017 32.0 8.0 69 171-248 32-102 (497)
408 PF02603 Hpr_kinase_N: HPr Ser 48.1 22 0.00047 28.7 3.3 43 189-243 64-110 (127)
409 COG0616 SppA Periplasmic serin 46.7 63 0.0014 30.6 6.7 83 190-290 80-169 (317)
410 COG0296 GlgB 1,4-alpha-glucan 45.7 16 0.00035 37.8 2.6 38 207-250 202-239 (628)
411 COG1504 Uncharacterized conser 43.8 52 0.0011 25.8 4.5 43 187-231 46-88 (121)
412 cd00886 MogA_MoaB MogA_MoaB fa 43.2 1E+02 0.0022 25.5 6.7 55 165-224 23-82 (152)
413 PLN03013 cysteine synthase 42.2 89 0.0019 31.0 7.1 53 120-184 178-230 (429)
414 cd01422 MGS Methylglyoxal synt 41.9 1.7E+02 0.0037 23.0 8.3 77 155-243 28-106 (115)
415 COG0027 PurT Formate-dependent 40.8 87 0.0019 29.6 6.3 82 154-246 75-157 (394)
416 cd01018 ZntC Metal binding pro 40.4 2.9E+02 0.0062 25.2 11.3 65 163-242 176-244 (266)
417 PRK05638 threonine synthase; V 39.0 1.9E+02 0.004 28.8 9.0 51 120-182 115-165 (442)
418 TIGR01536 asn_synth_AEB aspara 38.5 3E+02 0.0065 27.4 10.5 124 94-246 236-364 (467)
419 TIGR03573 WbuX N-acetyl sugar 38.3 3.6E+02 0.0078 25.7 12.7 101 119-248 62-170 (343)
420 COG2102 Predicted ATPases of P 38.2 2E+02 0.0044 25.7 7.9 95 120-231 4-111 (223)
421 PF05368 NmrA: NmrA-like famil 37.3 2.8E+02 0.0061 24.2 9.2 74 156-243 26-99 (233)
422 PRK05234 mgsA methylglyoxal sy 36.5 2.4E+02 0.0052 23.2 8.0 77 155-245 33-113 (142)
423 cd00758 MoCF_BD MoCF_BD: molyb 36.0 1.6E+02 0.0034 23.7 6.7 58 163-225 20-80 (133)
424 cd01020 TroA_b Metal binding p 35.2 3.5E+02 0.0075 24.6 11.5 69 163-241 159-235 (264)
425 TIGR01362 KDO8P_synth 3-deoxy- 35.0 1.2E+02 0.0026 27.8 6.1 61 179-248 117-185 (258)
426 TIGR00177 molyb_syn molybdenum 35.0 1.8E+02 0.0039 23.8 6.9 57 164-225 29-88 (144)
427 COG2870 RfaE ADP-heptose synth 33.7 1E+02 0.0022 30.2 5.7 78 158-244 95-177 (467)
428 PTZ00323 NAD+ synthase; Provis 33.7 4E+02 0.0087 24.9 10.2 102 67-185 6-115 (294)
429 smart00852 MoCF_biosynth Proba 33.2 1.9E+02 0.0042 23.1 6.8 58 163-225 19-79 (135)
430 COG0552 FtsY Signal recognitio 32.5 86 0.0019 29.9 5.0 128 156-290 170-306 (340)
431 PF01972 SDH_sah: Serine dehyd 32.4 1E+02 0.0022 28.5 5.3 75 191-284 76-155 (285)
432 COG2099 CobK Precorrin-6x redu 32.4 1.2E+02 0.0025 27.8 5.6 23 219-247 53-75 (257)
433 CHL00073 chlN photochlorophyll 32.3 79 0.0017 31.6 5.0 44 193-243 83-133 (457)
434 PRK08329 threonine synthase; V 32.2 1.6E+02 0.0034 28.2 7.0 52 120-183 107-158 (347)
435 cd01017 AdcA Metal binding pro 32.1 4E+02 0.0087 24.4 13.4 61 163-231 177-242 (282)
436 KOG0369 Pyruvate carboxylase [ 31.8 50 0.0011 34.4 3.5 35 211-252 164-198 (1176)
437 PF13380 CoA_binding_2: CoA bi 31.5 1E+02 0.0023 24.2 4.8 45 191-248 68-112 (116)
438 COG2052 Uncharacterized protei 31.3 84 0.0018 22.8 3.6 33 204-249 18-50 (89)
439 PLN02565 cysteine synthase 31.2 1.7E+02 0.0037 27.7 7.0 52 120-183 70-121 (322)
440 cd01019 ZnuA Zinc binding prot 31.1 4.3E+02 0.0092 24.4 13.2 61 163-231 185-250 (286)
441 cd01561 CBS_like CBS_like: Thi 29.5 1.9E+02 0.0041 26.7 6.9 53 120-184 56-108 (291)
442 cd00640 Trp-synth-beta_II Tryp 28.9 1.9E+02 0.0042 25.7 6.7 52 120-183 53-104 (244)
443 TIGR00096 probable S-adenosylm 28.5 4.6E+02 0.01 24.3 9.1 81 155-243 26-106 (276)
444 TIGR01275 ACC_deam_rel pyridox 27.6 1.9E+02 0.0041 27.0 6.6 55 120-183 58-113 (311)
445 PF00733 Asn_synthase: Asparag 27.6 55 0.0012 29.0 2.9 123 95-250 1-132 (255)
446 smart00642 Aamy Alpha-amylase 27.6 51 0.0011 27.9 2.5 30 214-249 65-94 (166)
447 TIGR01138 cysM cysteine syntha 26.6 1.8E+02 0.004 26.9 6.2 53 120-184 62-114 (290)
448 PRK11761 cysM cysteine synthas 26.5 2.4E+02 0.0052 26.2 7.0 52 120-183 66-117 (296)
449 TIGR01139 cysK cysteine syntha 26.4 2.1E+02 0.0046 26.5 6.7 52 120-183 60-111 (298)
450 PF04309 G3P_antiterm: Glycero 25.9 13 0.00029 31.8 -1.4 47 194-249 11-57 (175)
451 PF00128 Alpha-amylase: Alpha 25.9 46 0.00099 30.4 2.1 33 210-248 43-75 (316)
452 PLN00011 cysteine synthase 25.6 2.7E+02 0.0059 26.2 7.3 52 120-183 72-123 (323)
453 TIGR00288 conserved hypothetic 25.5 3.8E+02 0.0081 22.7 7.2 77 156-245 60-136 (160)
454 cd06448 L-Ser-dehyd Serine deh 25.5 2.4E+02 0.0051 26.5 6.9 52 120-183 54-105 (316)
455 cd06305 PBP1_methylthioribose_ 25.4 2.4E+02 0.0052 25.0 6.7 16 194-209 47-62 (273)
456 cd01137 PsaA Metal binding pro 25.4 2.6E+02 0.0055 25.9 7.0 61 163-231 183-248 (287)
457 TIGR03679 arCOG00187 arCOG0018 25.3 4.7E+02 0.01 23.0 9.4 94 121-231 2-111 (218)
458 COG0303 MoeA Molybdopterin bio 24.7 1.7E+02 0.0036 28.8 5.7 57 165-226 206-265 (404)
459 PLN02970 serine racemase 24.6 2.3E+02 0.0049 26.8 6.6 52 120-183 78-129 (328)
460 TIGR02035 D_Ser_am_lyase D-ser 24.1 1.6E+02 0.0034 29.3 5.5 52 120-183 155-206 (431)
461 PRK03910 D-cysteine desulfhydr 23.8 2.9E+02 0.0062 26.1 7.1 56 120-184 66-129 (331)
462 cd04736 MDH_FMN Mandelate dehy 23.7 4.2E+02 0.0091 25.6 8.1 53 188-246 243-297 (361)
463 TIGR02667 moaB_proteo molybden 23.3 2.7E+02 0.0059 23.4 6.1 63 163-230 23-91 (163)
464 TIGR02634 xylF D-xylose ABC tr 23.0 3.1E+02 0.0067 25.2 7.1 11 198-208 50-60 (302)
465 cd01016 TroA Metal binding pro 23.0 5.9E+02 0.013 23.3 10.9 65 163-231 167-235 (276)
466 PRK08813 threonine dehydratase 23.0 2.3E+02 0.0049 27.3 6.2 51 120-182 84-134 (349)
467 PRK08638 threonine dehydratase 22.9 1.7E+02 0.0036 27.9 5.3 51 120-182 78-128 (333)
468 PF01297 TroA: Periplasmic sol 22.1 5.7E+02 0.012 22.8 10.7 61 163-231 156-221 (256)
469 TIGR00289 conserved hypothetic 22.0 2.1E+02 0.0047 25.5 5.5 103 120-231 4-110 (222)
470 PRK08246 threonine dehydratase 22.0 1.8E+02 0.0039 27.3 5.3 52 120-183 71-122 (310)
471 PRK06815 hypothetical protein; 22.0 2.8E+02 0.0061 26.0 6.6 53 120-184 71-123 (317)
472 PF00532 Peripla_BP_1: Peripla 21.7 4.9E+02 0.011 23.7 8.1 76 157-246 6-88 (279)
473 PRK10717 cysteine synthase A; 21.7 1.7E+02 0.0038 27.6 5.2 52 120-183 67-118 (330)
474 cd06322 PBP1_ABC_sugar_binding 21.6 4E+02 0.0087 23.4 7.4 40 169-209 23-62 (267)
475 PRK09441 cytoplasmic alpha-amy 21.3 69 0.0015 32.2 2.4 32 212-249 74-105 (479)
476 PRK09545 znuA high-affinity zi 21.3 6.8E+02 0.015 23.4 13.2 61 163-231 209-274 (311)
477 PF07071 DUF1341: Protein of u 21.2 2.5E+02 0.0054 24.7 5.4 71 166-249 136-213 (218)
478 PRK00685 metal-dependent hydro 21.1 5.5E+02 0.012 22.2 9.5 75 156-231 136-213 (228)
479 PRK05198 2-dehydro-3-deoxyphos 21.0 2.9E+02 0.0062 25.4 6.0 61 179-248 125-193 (264)
480 COG3453 Uncharacterized protei 20.7 4.1E+02 0.009 21.4 6.1 51 160-212 43-98 (130)
481 TIGR02402 trehalose_TreZ malto 20.7 71 0.0015 32.7 2.4 34 210-249 151-184 (542)
482 cd01562 Thr-dehyd Threonine de 20.7 3.1E+02 0.0067 25.3 6.6 52 120-183 68-119 (304)
483 PF02571 CbiJ: Precorrin-6x re 20.5 1.8E+02 0.0038 26.5 4.7 26 216-247 50-75 (249)
484 COG1091 RfbD dTDP-4-dehydrorha 20.4 7E+02 0.015 23.2 8.6 48 189-242 36-96 (281)
485 PRK06381 threonine synthase; V 20.4 4.4E+02 0.0095 24.6 7.6 52 120-183 66-117 (319)
486 cd01994 Alpha_ANH_like_IV This 20.4 5.7E+02 0.012 22.1 8.3 98 120-231 3-113 (194)
487 TIGR00679 hpr-ser Hpr(Ser) kin 20.2 2E+02 0.0043 27.1 5.0 25 201-231 81-105 (304)
488 PRK05096 guanosine 5'-monophos 20.1 5.3E+02 0.012 24.7 7.8 20 220-245 201-220 (346)
489 cd03027 GRX_DEP Glutaredoxin ( 20.0 2.5E+02 0.0055 19.5 4.6 65 156-224 3-71 (73)
No 1
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-54 Score=422.28 Aligned_cols=324 Identities=37% Similarity=0.546 Sum_probs=291.8
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhh-----cCCCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHH
Q 017569 30 FKMPDNSMPKEAAYQVINDELML-----DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI 104 (369)
Q Consensus 30 ~~~p~~~~~~~~i~~~l~~~~~~-----~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~l 104 (369)
..+|+.+.+.++++..+.....+ ++||+.+....+++.+++.+.+++..+++.|..+|+.+|++.++|+++..|+
T Consensus 31 ~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 31 RMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNML 110 (460)
T ss_pred ccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHH
Confidence 46788888999999988877542 5688887777778788889999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh-cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE-QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~-~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
++++|.+. ...|++|+||||||++|++++|+.+...... .+...+.|+||+|...|+|+.|+++++|++++.+|+
T Consensus 111 ~~l~~~~~----~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~ 186 (460)
T COG0076 111 SDLLGAPE----EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT 186 (460)
T ss_pred HHHhCCCC----CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe
Confidence 99999974 3679999999999999999999998754432 333445679999999999999999999999999999
Q ss_pred cCCccccCHHHHHHHHhhcCcE--EEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc
Q 017569 184 EEGYYVMNPVKAVELVDENTIC--VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (369)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~~~~~--v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (369)
++.+++||+++|+++|++++.. |+.+.|+|++|.+||+++|+++|+++ ++|+|||||+||+++||..+...+
T Consensus 187 ~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~------~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 187 VPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY------GIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc------CCcEEEEccccceeecccCccchh
Confidence 8745899999999999999887 99999999999999999999999999 999999999999999999988777
Q ss_pred cccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCC-CCCCccccCCcchhHHHHHHHHHHHhcHhhH
Q 017569 262 DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI 340 (369)
Q Consensus 262 ~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~-~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~ 340 (369)
++.++++|||++|+|||+++|+|||++++||++.+.+.+.....|+++ ...++++.|||++..++++|+.|+.+|.+||
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy 340 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGY 340 (460)
T ss_pred hcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHH
Confidence 888999999999999999999999999999997666666666777775 5578899999999999999999999999999
Q ss_pred HHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 341 PSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 341 ~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
+++ +++++|++|++.|+++|.|+
T Consensus 341 ~~l~~~~~~~a~~la~~l~~~~~~e 365 (460)
T COG0076 341 RKLLDRTLELARYLAEELEKLGDFE 365 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 999 99999999999999999775
No 2
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=4.3e-53 Score=406.58 Aligned_cols=327 Identities=25% Similarity=0.341 Sum_probs=267.0
Q ss_pred hhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCC-h-HHHHHHHHHHhccCCCCCCCCcchHHHH
Q 017569 24 RAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM-E-PECDKLVMASINKNYVDMDEYPVTTELQ 97 (369)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~-~-~~v~~~~~~~~~~n~~~~~~~~~~~~le 97 (369)
++.++. .+|+.|.+.+++++++.+.+. .+.||+| .+++++++ + ..+.+++..++|.|...|..+|...++|
T Consensus 5 ~~~~~~-~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~--~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E 81 (373)
T PF00282_consen 5 RARLDE-ELPEEGESLEEVLKDLREILAPGVTHWHHPRF--FGFVPGGPSPASILADLLASALNQNGFTWEASPAATEIE 81 (373)
T ss_dssp GGGCHC-CHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTB--ESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHH
T ss_pred hhcCcc-ccccCCCCHHHHHHHHHHHhhccCCCCCChhH--hhhccCCccHHHHHHHHHHhhhcccccccccccccccch
Confidence 445554 789999999999999988765 3667887 45555433 3 4578999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCC--CCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHHhhh
Q 017569 98 NRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFARYF 174 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~Vi~s~~~h~s~~~~~~~~ 174 (369)
+++.+|+++++|.+..+. ....|++|+|||+||++|++++|+++.++....|.. ..+++|++|+.+|+|+.++++++
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l 161 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL 161 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee
Confidence 999999999999994321 125799999999999999999999877665555544 45678999999999999999999
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
|++++.||++++ ++||+++|+++|.+. |.+|+++.|+|.+|++||+++|+++|+++ ++|+|||||||
T Consensus 162 Glg~~~I~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~------~~wlHVDaA~g 234 (373)
T PF00282_consen 162 GLGVRKIPTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY------NIWLHVDAAYG 234 (373)
T ss_dssp TSEEEEE-BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC------T-EEEEEETTG
T ss_pred eeEEEEecCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc------ceeeeeccccc
Confidence 999999999985 899999999998752 56899999999999999999999999999 99999999999
Q ss_pred cccccccCCCccc-cccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC---------CCccccC
Q 017569 249 GFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTFTLNF 318 (369)
Q Consensus 249 ~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~---------~~~~l~~ 318 (369)
|..+ +.|..+. .+.++++|||++|+|||+++|++||++++|++..+...+...+.|+.... .+++++|
T Consensus 235 g~~~--~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~ 312 (373)
T PF00282_consen 235 GSAL--LSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG 312 (373)
T ss_dssp GGGG--GHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS
T ss_pred cccc--ccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccc
Confidence 9554 4555443 44488999999999999999999999999998877666667788988432 3467899
Q ss_pred CcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 319 SKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 319 tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
|| ...++++|++|+.+|.+|++++ +++++|++|+++|++.+.|+
T Consensus 313 SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~e 358 (373)
T PF00282_consen 313 SR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFE 358 (373)
T ss_dssp SG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred cc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 99 5459999999999999999999 99999999999999998764
No 3
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.2e-51 Score=402.24 Aligned_cols=344 Identities=60% Similarity=1.066 Sum_probs=293.1
Q ss_pred cccchhHhhhCCCCCCCCCCCCHHHHHHHHHHhhhh--cCCCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchH
Q 017569 17 TFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML--DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTT 94 (369)
Q Consensus 17 ~~~~~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~--~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~ 94 (369)
.|+++-....+++..+|+.|.+.+++++.+...+.+ ..||++ ++|+++++.|++.+++..+++.|.++|..++...
T Consensus 2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~--~~~~tt~~~p~~~~~~~~~l~~~~~np~s~~~~~ 79 (431)
T TIGR01788 2 AYGSRAVSTGIPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNL--ATFVTTWMEPEARKLMDETINKNMIDKDEYPQTA 79 (431)
T ss_pred CccccccccCCCcccCCCCCCCHHHHHHHHHHHhhhcCCcceee--eeeeCCCCCHHHHHHHHHHHhcCCCCcccCccHH
Confidence 455555666778889999999999999999887665 446655 7899999889899999999998888888888888
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh
Q 017569 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF 174 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~ 174 (369)
++|+++++|+++++|+++. +....+++|+||||||++++.+++..+..+.+..|....++.|++|+.+|+|+.++++.+
T Consensus 80 ~le~~~~~~la~llg~~~~-~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~l 158 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAK-DAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYF 158 (431)
T ss_pred HHHHHHHHHHHHHhCCCCC-CCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHc
Confidence 9999999999999999831 012557789999999999999987654332222232223468999999999999999999
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|++++.||++++++.+|+++|+++|+++|.+|+++++||.+|.+||+++|+++|+++++.++.++|+|||+||+++.+||
T Consensus 159 g~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~ 238 (431)
T TIGR01788 159 DVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPF 238 (431)
T ss_pred CceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHH
Confidence 99999999987446999999999999999999999999999999999999999999855444479999999999999888
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~ 334 (369)
..++.+.++...++||+++|+|||+++|+|+|++++|+++.+...+...++|+++...+.+++++|++..+++.|+.|+.
T Consensus 239 ~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~ 318 (431)
T TIGR01788 239 VYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLR 318 (431)
T ss_pred hCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHH
Confidence 88877888888899999999999999999999999998755545555677898875556788999998778999999999
Q ss_pred hcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 335 LGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 335 lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
+|.+|++++ +++++|++|+++|++.+.|+
T Consensus 319 lG~~G~~~i~~~~~~la~~l~~~L~~~~~~e 349 (431)
T TIGR01788 319 LGREGYRKIMQNSLDVARYLAEEIAKLGPFE 349 (431)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999999998 99999999999999998765
No 4
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=6.8e-52 Score=411.21 Aligned_cols=328 Identities=18% Similarity=0.209 Sum_probs=277.4
Q ss_pred hhHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCC--hHHHHHHHHHHhccCCCCCCCCcchH
Q 017569 21 RYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPVTT 94 (369)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~--~~~v~~~~~~~~~~n~~~~~~~~~~~ 94 (369)
.+++..++. ++|+.|.+.+++++++.+.+. ++.||+| ++|++++. +..+.|++..++|.+.+.|..+|...
T Consensus 93 ~~l~~~l~~-~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f--~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t 169 (539)
T PLN02590 93 GYLRDMLPD-SAPERPESLKELLDDVSKKIMPGITHWQSPSY--FAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAAT 169 (539)
T ss_pred HHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe--eEeccCCCcHHHHHHHHHHHhcccccCCcccCchhH
Confidence 456677775 799999999999999988664 4789987 56666544 35589999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCC--CCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHH
Q 017569 95 ELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFA 171 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~Vi~s~~~h~s~~~~~ 171 (369)
++|+++.+|+++++|++..+. ....|++++|||+||+.+++++|+++.++. |.. ..+.+|++|+.+|+|+.|++
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~---g~~~~~~~vvy~S~~aH~Sv~KAa 246 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKV---GKTLLPQLVVYGSDQTHSSFRKAC 246 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhh---cccCCCCEEEEecCCchHHHHHHH
Confidence 999999999999999986321 124699999999999999999998654322 221 22348889999999999999
Q ss_pred hhhcce---eEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceE
Q 017569 172 RYFEVE---LKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (369)
Q Consensus 172 ~~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l 241 (369)
+++|+. ++.||++. ++++||+++|+++|.+ .|.+|+++.|+|.+|++||+++|+++|+++ ++|+
T Consensus 247 ~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~------g~Wl 320 (539)
T PLN02590 247 LIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY------GIWL 320 (539)
T ss_pred HHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh------CCeE
Confidence 999994 89999985 3589999999999975 378999999999999999999999999999 9999
Q ss_pred EeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCC---------C
Q 017569 242 HVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD---------Q 311 (369)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~---------~ 311 (369)
|||||||++++ ++|+.+..+. ++.+||+++|+|||+++|++||++++|++..+..++...++|+... .
T Consensus 321 HVDaA~GG~al--~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~ 398 (539)
T PLN02590 321 HVDAAYAGNAC--ICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNY 398 (539)
T ss_pred EEecchhhhhh--cChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCc
Confidence 99999999886 5666555444 8899999999999999999999999999876656666677787431 2
Q ss_pred CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 312 ~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
.++++++||+++ ++++|++|+.+|.+||+++ +++++|+||+++|++.+.|+
T Consensus 399 ~d~~i~lsRr~r-aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe 451 (539)
T PLN02590 399 KDWQISLSRRFR-SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFE 451 (539)
T ss_pred cccCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 356789999986 9999999999999999999 99999999999999988765
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=5.7e-49 Score=389.99 Aligned_cols=329 Identities=17% Similarity=0.218 Sum_probs=270.6
Q ss_pred hhHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCC--hHHHHHHHHHHhccCCCCCCCCcchH
Q 017569 21 RYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPVTT 94 (369)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~--~~~v~~~~~~~~~~n~~~~~~~~~~~ 94 (369)
..++..++. .+|+.|.+.+++++++.+.+. ++.||+| .++.++++ +..+.|++..++|++...|..+|...
T Consensus 45 ~~l~~~~~~-~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f--~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~ 121 (490)
T PLN02880 45 GYLRELLPD-SAPNQPETLDQVLDDVQAKILPGVTHWQSPNY--FAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAAT 121 (490)
T ss_pred HHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeccCCCcHHHHHHHHHHHhhccCCcccccCcccH
Confidence 445666765 689999999999999987654 3678987 45555433 35578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCC--CCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh
Q 017569 95 ELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR 172 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~ 172 (369)
++|+++.+|+++++|++..+. ....|++|+|||+||++|++++|+....+....+ ..+.+|++|+.+|+|+.|+++
T Consensus 122 ~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 122 ELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--LEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred HHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--cCCeEEEEcCCchHHHHHHHH
Confidence 999999999999999986320 0135899999999999999999987543221111 124578899999999999999
Q ss_pred hhcce---eEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE
Q 017569 173 YFEVE---LKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 173 ~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
++|++ ++.||+++ ++++||+++|+++|++ .|.+|+++.|+|.+|.+||+++|+++|+++ ++|+|
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~------~iwlH 273 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN------GMWFH 273 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc------CCEEE
Confidence 99996 89999985 4589999999999975 278999999999999999999999999999 99999
Q ss_pred eecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCC---------CC
Q 017569 243 VDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD---------QP 312 (369)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~---------~~ 312 (369)
||||||++++ +.++.+..+. ++++||+++|+|||+++|++||++++|++..+...+...++|+... ..
T Consensus 274 VDaA~gg~~~--~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 351 (490)
T PLN02880 274 VDAAYAGSAC--ICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYK 351 (490)
T ss_pred EehhhHHHHH--hCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChh
Confidence 9999999876 4555555555 6789999999999999999999999998665545555566676432 12
Q ss_pred CccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 313 TFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 313 ~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
+++++++|++. ++++|++|+.+|.+|++++ +++++|+|+++.|++.+.|+
T Consensus 352 ~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e 403 (490)
T PLN02880 352 DWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE 403 (490)
T ss_pred ccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 35678899886 8999999999999999999 99999999999999876554
No 6
>PLN02263 serine decarboxylase
Probab=100.00 E-value=3.9e-47 Score=368.51 Aligned_cols=293 Identities=18% Similarity=0.175 Sum_probs=240.4
Q ss_pred HHHHHHHHHHhhhhcCCCCccccccccC---CChHHHHHHHHHHhccCCCCCC-CCc---chHHHHHHHHHHHHHHhCCC
Q 017569 39 KEAAYQVINDELMLDGNPRLNLASFVTT---WMEPECDKLVMASINKNYVDMD-EYP---VTTELQNRCVNMIAHLFNTP 111 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~p~~~l~~~~~~---~~~~~v~~~~~~~~~~n~~~~~-~~~---~~~~le~~~~~~la~l~g~~ 111 (369)
.+++++.+.+.+... .. ++.+| |. +....+.+.+...+| |.+++. .++ ...++|+++.+|+++++|.+
T Consensus 75 ~~~~l~~~~~~~~~~-~~--~~~gY-p~n~~~d~s~l~~~l~~~~n-N~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p 149 (470)
T PLN02263 75 MASVLARYRKTLVER-TK--HHLGY-PYNLDFDYGALGQLQHFSIN-NLGDPFIESNYGVHSRQFEVGVLDWFARLWEIE 149 (470)
T ss_pred HHHHHHHHHHHHHhc-cc--ceeCC-CCcccCChhhHHHHHHhhcc-CCCCccccCCcchhHHHHHHHHHHHHHHHhCCC
Confidence 356666666554321 11 13455 32 223556777766554 444443 344 68999999999999999998
Q ss_pred CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccC
Q 017569 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMN 191 (369)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d 191 (369)
++ ..+|++|+||||||++|++++|+.++ +.++++|+.+|+|+.|+++++|++++.||++++ ++||
T Consensus 150 ~~---~~~G~vtsGGTEaNL~Al~aARe~~~-----------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~-g~mD 214 (470)
T PLN02263 150 KN---EYWGYITNCGTEGNLHGILVGREVFP-----------DGILYASRESHYSVFKAARMYRMECVKVDTLVS-GEID 214 (470)
T ss_pred CC---CCeEEEeCcHHHHHHHHHHHHHhhcC-----------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCC-CcCc
Confidence 52 36799999999999999999998531 358999999999999999999999999999874 8999
Q ss_pred HHHHHHHHhhc---CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCc-----eEEeecccccccccccCCCccccc
Q 017569 192 PVKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT-----PIHVDAASGGFIAPFLYPDLEWDF 263 (369)
Q Consensus 192 ~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~ 263 (369)
+++|+++|.++ |.+|+++.|||++|++||+++|+++|+++ ++ |+||||||||+++||......+++
T Consensus 215 ~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~------g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df 288 (470)
T PLN02263 215 CADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC------GFSQDRFYIHCDGALFGLMMPFVKRAPKVTF 288 (470)
T ss_pred HHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc------CCccCCeeEEEeccchhhHhhhcccccccCC
Confidence 99999999764 67888999999999999999999999999 75 999999999999988775445666
Q ss_pred cCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH
Q 017569 264 RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF 343 (369)
Q Consensus 264 ~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~ 343 (369)
.. .+|||++|+|||+++|++||++++|++. + ..+...+.|+... +.++.|||++..++++|++|+.+|.+|++++
T Consensus 289 ~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~--d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~ 363 (470)
T PLN02263 289 KK-PIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYRGFQKE 363 (470)
T ss_pred Cc-CccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCC--CCCcCCCCCcHHHHHHHHHHHHhCHHHHHHH
Confidence 54 4999999999999999999999999643 2 4555678898764 4578899999889999999999999999999
Q ss_pred --HhhHHHHHHHHHHHhcCCC
Q 017569 344 --CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 344 --~~~~~a~~l~~~L~~~g~~ 362 (369)
+|+++|+|+.++|++.|+.
T Consensus 364 i~~~~~~A~~l~~~l~~~g~~ 384 (470)
T PLN02263 364 VQKCLRNAHYLKDRLREAGIS 384 (470)
T ss_pred HHHHHHHHHHHHHHHHhCCCe
Confidence 9999999999999998763
No 7
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=350.14 Aligned_cols=343 Identities=48% Similarity=0.703 Sum_probs=312.9
Q ss_pred cccCCCcccccccccchhHhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhcc-C
Q 017569 5 TTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINK-N 83 (369)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~-n 83 (369)
.+|..+-++..+.|.++.-++.++..++|++|.+.+++++.++++.+++++|+.+..++...+.++...+++.++++. |
T Consensus 29 ~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~N 108 (491)
T KOG1383|consen 29 EKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKFN 108 (491)
T ss_pred HHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhcC
Confidence 445556778889999999999999889999999999999999999999999998888888888888889999999988 9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 017569 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (369)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~ 163 (369)
+.+++.+|+..++|+++.++++.+++.+.+ ..|..|+||||+++++....++. |... +++..|.++.+...
T Consensus 109 ~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~----~~g~~t~G~Ses~l~~~k~~~~~----r~~~-k~I~~p~iv~~~~v 179 (491)
T KOG1383|consen 109 PLHPDEFPVVRKLEAECVNMIANLFNAPSD----SCGCGTVGGSESGLAAKKSYRNR----RKAQ-KGIDKPNIVTPQNV 179 (491)
T ss_pred ccCccccchhHHHHHHHHHHHHHHhcCCcc----ccCccccccchHHHHHHHHHHHH----HHhc-cCCCCccccchHHH
Confidence 999999999999999999999999999952 57999999999976665555543 3332 45678899999999
Q ss_pred cchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH-hhhccCCCceEE
Q 017569 164 QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIH 242 (369)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~-~~~~~~~~~~l~ 242 (369)
|.+++++++.+++.++.||++++.+++|+.++.+.++++|++++...|++|+|.++|+++|.+++-+ + ++++|
T Consensus 180 ~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w------~ipiH 253 (491)
T KOG1383|consen 180 HAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW------DIPIH 253 (491)
T ss_pred HHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh------CCcee
Confidence 9999999999999999999997679999999999999999999999999999999999999999999 9 99999
Q ss_pred eeccccccccc-ccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcc
Q 017569 243 VDAASGGFIAP-FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 243 vD~a~~~~~~~-~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~ 321 (369)
||+|.|+++.| +..+..+++|.++++-|+++|+||++++|.|+|++++|+++++...+....+|+|+.+.++|++|||+
T Consensus 254 vDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~ 333 (491)
T KOG1383|consen 254 VDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRP 333 (491)
T ss_pred ecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCc
Confidence 99999999998 55566689999999999999999999999999999999999998888899999999999999999999
Q ss_pred hhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+..++++|++|..+|.+||.+. +|.+++++|++.+++.+-|
T Consensus 334 g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i 376 (491)
T KOG1383|consen 334 GSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGI 376 (491)
T ss_pred ccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999998 9999999999999986554
No 8
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=7.2e-46 Score=368.65 Aligned_cols=324 Identities=18% Similarity=0.252 Sum_probs=258.4
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCChH---HHHHHHHHHhccCCCCCCCCcchHHHHH
Q 017569 26 AIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEP---ECDKLVMASINKNYVDMDEYPVTTELQN 98 (369)
Q Consensus 26 ~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~~~---~v~~~~~~~~~~n~~~~~~~~~~~~le~ 98 (369)
.++...+|+.|.+.+++++++.+.+. ++.||+| .++.+...++ .+.+ +..++|.|...|..+|..+++|+
T Consensus 56 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f--~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~ 132 (522)
T TIGR03799 56 DFSSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSF--IGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLER 132 (522)
T ss_pred cccccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCe--EEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHH
Confidence 34455799999999999998766553 4789987 4555543222 2456 56789999999999999999999
Q ss_pred HHHHHHHHHhCCCCC--------CCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH------HhcCCC-------CCCCeE
Q 017569 99 RCVNMIAHLFNTPVA--------DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR------KEQGKP-------YDKPNI 157 (369)
Q Consensus 99 ~~~~~la~l~g~~~~--------~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~------~~~g~~-------~~~~~V 157 (369)
.+.+|++++++..++ ......|++|+|||+||++|++++|+...... ...|.. ..+.+|
T Consensus 133 ~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v 212 (522)
T TIGR03799 133 QVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAI 212 (522)
T ss_pred HHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEE
Confidence 999999999863211 01235699999999999999999998643211 001111 134689
Q ss_pred EecCCCcchHHHHHhhhcc---eeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 158 VTGANVQVCWEKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 158 i~s~~~h~s~~~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
++|+.+|+|+.++++.+|+ .++.||++++ ++||+++|+++|++ ++.+|+.++|+|.+|.+||+++|+++|
T Consensus 213 ~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~ 291 (522)
T TIGR03799 213 LVSERGHYSLGKAADVLGIGRDNLIAIKTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIA 291 (522)
T ss_pred EECCCchHHHHHHHHHcCCCcccEEEEEeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHH
Confidence 9999999999999999999 6999999875 89999999999973 356677889999999999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCcc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL 307 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~ 307 (369)
+++ ++|+|||||||++.. +.++.+..+. ++++||+++|+|||+++|.|||++++|++..+ ..+...+.|+
T Consensus 292 ~~~------g~~lHVDaA~gg~~~--~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl 362 (522)
T TIGR03799 292 QEL------GCHFHVDAAWGGATL--LSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHHAEYI 362 (522)
T ss_pred HHc------CCeEEEEchhhhHHH--hCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccCcchh
Confidence 999 999999999998765 4454444555 56899999999999999999999999987553 4455566776
Q ss_pred CC----CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 308 GS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 308 ~~----~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
.. +...++++|||++. ++++|++|+.+|.+|++++ +++++|+||+++|++.+-|+
T Consensus 363 ~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 363 LRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred cCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 21 12346789999987 6899999999999999999 99999999999999887664
No 9
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.7e-45 Score=367.31 Aligned_cols=321 Identities=16% Similarity=0.164 Sum_probs=253.4
Q ss_pred CCCCCCCCHHHHHHHHHHhhh----hcCCC-CccccccccCCCh-HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHH
Q 017569 31 KMPDNSMPKEAAYQVINDELM----LDGNP-RLNLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI 104 (369)
Q Consensus 31 ~~p~~~~~~~~i~~~l~~~~~----~~~~p-~~~l~~~~~~~~~-~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~l 104 (369)
.+.+...+.+++++++.+.+. .+.|| +| ++++.+.+.. ..+.+++..++|.|...|+.+|.++++|+++.+|+
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry-~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~l 132 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY-WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEF 132 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccce-EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHH
Confidence 345555678899999988664 25678 77 4454444443 45789999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHH----HHHH----------------------------------
Q 017569 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ----QKRK---------------------------------- 146 (369)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~----~~~~---------------------------------- 146 (369)
++++|++. .+|++|+|||+||+.+++++|+... .+..
T Consensus 133 a~l~G~~~-----~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~ 207 (608)
T TIGR03811 133 ATLMGYKN-----GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDE 207 (608)
T ss_pred HHHhCCCC-----CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhh
Confidence 99999985 5799999999999999999998531 0000
Q ss_pred ------hcCCCCCCC-eEEecCCCcchHHHHHhhhcce---eEEEeccCCccccCHHHHHHHHhhc------CcEEEEee
Q 017569 147 ------EQGKPYDKP-NIVTGANVQVCWEKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDEN------TICVAAIL 210 (369)
Q Consensus 147 ------~~g~~~~~~-~Vi~s~~~h~s~~~~~~~~G~~---v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~ 210 (369)
..|....+. ++++|...|+|+.|++.++|++ ++.||+|++ ++||+++|+++|++. +.+|+.+.
T Consensus 208 ~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVata 286 (608)
T TIGR03811 208 IKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSN-YRMDINELEKIIRKLAAEKTPILGVVGVV 286 (608)
T ss_pred hhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 001111122 7899999999999999999996 899999875 899999999999752 56799999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccC------------------------------CCcc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY------------------------------PDLE 260 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~------------------------------~~~~ 260 (369)
|||.+|++||+++|+++|++..+ ++..+|+||||||||++...+. ++.+
T Consensus 287 GTT~~GaiDpl~eI~~l~~~~~~-~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~ 365 (608)
T TIGR03811 287 GSTEEGAVDGIDKIVALRNKLMK-EGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVY 365 (608)
T ss_pred CCcCCcccCCHHHHHHHHHHHHH-cCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHH
Confidence 99999999999999999965321 2223479999999997522111 1222
Q ss_pred cccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-------CCccccCCcchhHHHHHHHHH
Q 017569 261 WDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ-------PTFTLNFSKGSSQIIAQYYQF 332 (369)
Q Consensus 261 ~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~-------~~~~l~~tr~~~~~l~~~~~l 332 (369)
..++ ++++|||++|+|||++.|++||++++|++.. ...+...++|+.... ..++++|||++..++++|+++
T Consensus 366 ~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~-~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~l 444 (608)
T TIGR03811 366 NAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRM-RDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAH 444 (608)
T ss_pred HHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHH-HHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHH
Confidence 2344 7899999999999999999999999999853 345556778874311 235788999988899999999
Q ss_pred HHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 333 IRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 333 ~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+.+ |.+||.++ +++++|++++++|++++
T Consensus 445 r~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 445 KVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 998 99999999 99999999999999965
No 10
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=6.7e-45 Score=348.13 Aligned_cols=265 Identities=18% Similarity=0.183 Sum_probs=227.1
Q ss_pred HHHHHHHHhccCCCCCCCCc----chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 72 CDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 72 v~~~~~~~~~~n~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
..+.+..++.+|.++|.... ...++|+++++|+++++|++++ ..+|++|+||||||+++++++|+..
T Consensus 39 ~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~---~~~G~fTsGGTEaNl~al~~ar~~~------ 109 (374)
T PLN03032 39 ELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKD---EYWGYITTCGTEGNLHGILVGREVF------ 109 (374)
T ss_pred HHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCc---cCCEEEeCchHHHHHHHHHHHHHhC------
Confidence 45556667766666664432 6899999999999999999863 3569999999999999999987641
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
.+..|++|..+|+|+.++++++|++++.||++++ ++||+++|+++|++ +|.+|+++++||++|++||+++|
T Consensus 110 -----~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI 183 (374)
T PLN03032 110 -----PDGILYASRESHYSVFKAARMYRMEAVKVPTLPS-GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRI 183 (374)
T ss_pred -----CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC-CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHH
Confidence 1248999999999999999999999999999875 89999999999987 57899999999999999999999
Q ss_pred HHHHHHhhhccCCC-----ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 225 HDLLTKKNEETGWD-----TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 225 ~~l~~~~~~~~~~~-----~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
+++|+++ + +|+|||||++++..||......+++. .++||+++|+|||+++|.|+|++++|++. + ..
T Consensus 184 ~~i~~~~------g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~ 254 (374)
T PLN03032 184 LRILKEL------GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KA 254 (374)
T ss_pred HHHHHHh------CCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchh-h-Hh
Confidence 9999998 6 59999999999988876544445554 47999999999999999999999999743 3 34
Q ss_pred cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 300 ~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+...++|+... +.++.|||++..++++|++|+.+|.+|++++ +|+++|+||+++|++.|+.
T Consensus 255 ~~~~~~Yl~~~--d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~ 317 (374)
T PLN03032 255 LSQNVEYLNSR--DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLT 317 (374)
T ss_pred hccCCcccCCC--CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 55678888764 5688999999889999999999999999999 9999999999999998664
No 11
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=5e-44 Score=344.28 Aligned_cols=282 Identities=20% Similarity=0.268 Sum_probs=232.6
Q ss_pred cCCCCccccccc-cCCChHHHHHHHHHHhccCCCCCCCCc----chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch
Q 017569 53 DGNPRLNLASFV-TTWMEPECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (369)
Q Consensus 53 ~~~p~~~l~~~~-~~~~~~~v~~~~~~~~~~n~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (369)
..||+++++.-. .......+.+++.... +|.++|...+ ...++|+++++|+++++|++++ ..+|++|+|||
T Consensus 19 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~-~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~---~~~G~~TsGgT 94 (380)
T PRK02769 19 RHNQYFNVGYPEAADFDYSALKRFFSFSI-NNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFN---ESWGYITNGGT 94 (380)
T ss_pred HHhhhcccCCCchhhcCHHHHHHHHHhhh-ccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCC---CCCEEEecChH
Confidence 457776433211 2232345555554444 4566665544 4789999999999999999853 24799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc---Cc
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TI 204 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---~~ 204 (369)
|||+.+++++|+.. .+++|++|+.+|+|+.++++.+|++.+.||+++ ++++|+++|+++|+++ |+
T Consensus 95 ean~~a~~~ar~~~-----------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~-~g~id~~~L~~~i~~~~~~t~ 162 (380)
T PRK02769 95 EGNLYGCYLARELF-----------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP-NGEIDYDDLISKIKENKNQPP 162 (380)
T ss_pred HHHHHHHHHHHHhC-----------CCcEEEeCCCceehHHHHHHHcCCCCceeccCC-CCcCcHHHHHHHHHhCCCCcE
Confidence 99999999887631 135899999999999999999999999999986 4899999999999886 99
Q ss_pred EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC---ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC
Q 017569 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD---TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~---~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~ 281 (369)
+|+++++||++|.+||+++|+++|+++ + +|+|||||++++..||.....++++.. ++||+++|+|||+++
T Consensus 163 lvv~t~gtt~tG~idpi~~I~~i~~~~------g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~ 235 (380)
T PRK02769 163 IIFANIGTTMTGAIDNIKEIQEILKKI------GIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGS 235 (380)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHHh------CCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCC
Confidence 999999999999999999999999999 7 799999999999988877655566655 899999999999999
Q ss_pred CCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|.|+|++++|++. + ..+....+|+.. .+.++.|||++..++++|++|+.+|.+|++++ +++++|+|+.++|++.
T Consensus 236 P~g~G~l~~r~~~-~-~~~~~~~~yl~~--~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~ 311 (380)
T PRK02769 236 PMPCGIVLAKKKY-V-ERISVDVDYIGS--RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN 311 (380)
T ss_pred CCCcEEEEEehhh-h-hhcccCccccCC--CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999753 2 233445677765 34578899999889999999999999999998 9999999999999987
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|+
T Consensus 312 g~ 313 (380)
T PRK02769 312 GI 313 (380)
T ss_pred CC
Confidence 65
No 12
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=311.14 Aligned_cols=322 Identities=17% Similarity=0.150 Sum_probs=271.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhhhh---cCCCCccccccccCCCh-HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHH
Q 017569 27 IPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVN 102 (369)
Q Consensus 27 ~~~~~~p~~~~~~~~i~~~l~~~~~~---~~~p~~~l~~~~~~~~~-~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~ 102 (369)
+-..++|+.+.+.+++++..++.+.. .+||+|. .....+..+ .-+.+.+.+.+|.|.+.|+..|...-+|.++..
T Consensus 70 l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprff-NQl~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~ 148 (510)
T KOG0629|consen 70 LFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFF-NQLSSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLA 148 (510)
T ss_pred HhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcch-hhhccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHH
Confidence 34468999999999999999988863 7899972 223333322 457899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCCcchHHHHHhhhcce---e
Q 017569 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWEKFARYFEVE---L 178 (369)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~Vi~s~~~h~s~~~~~~~~G~~---v 178 (369)
.+.++.|++.. ..+++++||+-+|++++.++|.+..++.+..|...-++ .+++|+.+|||+.+++.++|++ +
T Consensus 149 km~~ivGw~~~----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 149 KMREIVGWEEG----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHhCCCCC----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 99999999973 35999999999999999999887544433344333234 6678999999999999999965 8
Q ss_pred EEEeccCCccccCHHHHHHHHhh---c---CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~---~---~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
+.|++++. |+|++++||+.|-+ + |.+|.+|+|||..|++||++.|+++|++| ++|+|||||+||+.+
T Consensus 225 ~~v~t~e~-Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~------~lWmHvDAAwGGglL 297 (510)
T KOG0629|consen 225 IKVKTDER-GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH------KLWMHVDAAWGGGLL 297 (510)
T ss_pred EEeccccc-CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc------CEEEEeecccccccc
Confidence 99999985 99999999999864 3 78999999999999999999999999999 999999999999887
Q ss_pred cccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC---------CCccccCCcch
Q 017569 253 PFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTFTLNFSKGS 322 (369)
Q Consensus 253 ~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~---------~~~~l~~tr~~ 322 (369)
++.++++.+. ++++||+++++||++++|..||.++.|...++..+.+..+.|+...+ .+..++|.|..
T Consensus 298 --mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 298 --MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred --cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence 7777788887 89999999999999999999999999988777666666666664322 24467899888
Q ss_pred hHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 323 SQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 323 ~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
. ++++|..+++-|.+|+++. +|+++|+||..+|++.+-|+
T Consensus 376 D-~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~ 417 (510)
T KOG0629|consen 376 D-VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFE 417 (510)
T ss_pred c-HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccce
Confidence 5 9999999999999999988 99999999999999988765
No 13
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-40 Score=309.34 Aligned_cols=329 Identities=18% Similarity=0.222 Sum_probs=281.7
Q ss_pred hHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCC--ChHHHHHHHHHHhccCCCCCCCCcchHH
Q 017569 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTW--MEPECDKLVMASINKNYVDMDEYPVTTE 95 (369)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~--~~~~v~~~~~~~~~~n~~~~~~~~~~~~ 95 (369)
+++..+|. +.|+.+.+.++|+.+++++++ +|.||.| ..|.|+. .+..+.|++...++.-.++|..+|..++
T Consensus 37 Yl~~llP~-~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~f--hAyfpa~~s~~siladmLs~~i~~vGFtW~ssPa~TE 113 (511)
T KOG0628|consen 37 YLRDLLPS-KAPEKPESWEDILGDLEKIIMPGITHWQHPHF--HAYFPAGNSYPSILADMLSGGIGCVGFTWASSPACTE 113 (511)
T ss_pred hhhhhCCC-CCCCChhhHHHHHHHHHHHccCCCcccCCCce--eeEccCccchHHHHHHHHhcccccccceeecCcchHH
Confidence 35677776 689999999999999999987 6899987 4666653 3466889999999888899999999999
Q ss_pred HHHHHHHHHHHHhCCCCCC----CCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC------CCCCeEEecCCCcc
Q 017569 96 LQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP------YDKPNIVTGANVQV 165 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~------~~~~~Vi~s~~~h~ 165 (369)
||.-+++|++++++.|..+ .....|++-.+++|+++.++.++|...-++.+..-+. ..+-++|+|+.+|.
T Consensus 114 LE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahs 193 (511)
T KOG0628|consen 114 LEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHS 193 (511)
T ss_pred HHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccc
Confidence 9999999999999998654 2245688888999999999999988654432211100 12347899999999
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCc
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~ 239 (369)
|+++++.+.|++.+.++.++ ++.|+.+.|+++|.++ |.+|++|.|||.+.++|++++|..+|+++ ++
T Consensus 194 sveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~------gl 266 (511)
T KOG0628|consen 194 SVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREE------GL 266 (511)
T ss_pred hHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhc------CE
Confidence 99999999999999999998 5999999999999874 78999999999999999999999999999 99
Q ss_pred eEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-------
Q 017569 240 PIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------- 311 (369)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~------- 311 (369)
|+|||+||+|.++ .||+.+...+ ++.+||+.+++|||+++-..|+.+++|++..+..++..++-|+.+..
T Consensus 267 WLHVDAAYAGsa~--iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dy 344 (511)
T KOG0628|consen 267 WLHVDAAYAGSAF--ICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDY 344 (511)
T ss_pred EEEeehhhccccc--cCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCc
Confidence 9999999998765 8898887777 89999999999999999999999999999777777777777776542
Q ss_pred CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 312 ~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
..+.+..+|+++ ++++|..++.+|.+++++. ++.++|+++.+.+.+.+.|+
T Consensus 345 rhwqipl~rRfR-SLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE 397 (511)
T KOG0628|consen 345 RHWQIPLGRRFR-SLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFE 397 (511)
T ss_pred cccccccccchh-hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcce
Confidence 345677899887 9999999999999999999 89999999999999988775
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.4e-33 Score=270.99 Aligned_cols=301 Identities=28% Similarity=0.385 Sum_probs=237.1
Q ss_pred CCHHHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCC
Q 017569 37 MPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (369)
Q Consensus 37 ~~~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (369)
.++.++++.+++....+-.+. .+.+...+++.|.+.+++.++++.+...+..+++..++++++++++++++|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~---- 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE-RILSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD---- 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH-HeeeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC----
Confidence 567899999988765432221 223444556678888888888876655555567788888999999999999875
Q ss_pred CCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHH
Q 017569 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (369)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (369)
..+++++||++++..++.+++... ...+++|++++.+|+++.++++..|++++.||++++ +.+|+++|+
T Consensus 77 -~~~~~~~ggt~a~~~a~~~~~~~~---------~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~ 145 (371)
T PRK13520 77 -AYGYITSGGTEANIQAVRAARNLA---------KAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDD-YRVDVKAVE 145 (371)
T ss_pred -CCeEEecCcHHHHHHHHHHHHhhc---------cCCCceEEecCcchHHHHHHHHHcCceEEEecCCCC-CcCCHHHHH
Confidence 247899999999999988876520 012468999999999999999999999999998764 799999999
Q ss_pred HHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc
Q 017569 197 ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (369)
Q Consensus 197 ~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h 276 (369)
+++++++++|+++.++|++|.+.|+++|.++|+++ ++++|||+||+++..++......+++...++|++++++|
T Consensus 146 ~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~------g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 146 DLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN------GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc------CCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 99998898888899999999999999999999999 999999999998776543322223444568999999999
Q ss_pred cCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHH
Q 017569 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSF 354 (369)
Q Consensus 277 K~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~ 354 (369)
||+++|.++|++++++++.. ..+....+|..+.. ++...||+++...+++|.+|+.++.+|++++ ++.+++++|++
T Consensus 220 K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 220 KMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK-QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred cccCccCCceEEEEcCHHHH-HhhcccCccccCCC-CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 99998999999998765433 22222234443321 3344588888889999999999999999877 99999999999
Q ss_pred HHHhcCC
Q 017569 355 FVIHSSY 361 (369)
Q Consensus 355 ~L~~~g~ 361 (369)
+|++.|+
T Consensus 298 ~L~~~g~ 304 (371)
T PRK13520 298 ELKERGF 304 (371)
T ss_pred HHHhCCC
Confidence 9998864
No 15
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3.2e-33 Score=267.51 Aligned_cols=258 Identities=35% Similarity=0.430 Sum_probs=213.0
Q ss_pred cccccCCCh-HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 61 ASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 61 ~~~~~~~~~-~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
+++.+++.+ ..+.+.+...+|.+...|..+++..++|+++++|+++++|++.. ...+++|+|||+||.+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~---~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 3 AGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE---DADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred ccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC---CCCEEEeCChhHHHHHHHHHHHH
Confidence 344444433 55789999999988777888899999999999999999999721 24599999999999999999877
Q ss_pred HHHHHHHhcCC-CCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCC
Q 017569 140 KWQQKRKEQGK-PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGS 212 (369)
Q Consensus 140 ~~~~~~~~~g~-~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~ 212 (369)
++..++...|. +.++++|++++++|+++.++++.+|++++.+|++++ +.+|+++|++++++ ++++|+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~ 158 (345)
T cd06450 80 RARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGT 158 (345)
T ss_pred HhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEeccc
Confidence 54322211111 122458999999999999999999999999999875 69999999999988 78899999999
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
|++|.++|+++|+++|+++ ++|+|+|+||+.+..++..... ......++|++++++|||+++|.|+|+++++
T Consensus 159 ~~tG~~~~~~~i~~~~~~~------~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~- 230 (345)
T cd06450 159 TDTGAIDPLEEIADLAEKY------DLWLHVDAAYGGFLLPFPEPRH-LDFGIERVDSISVDPHKYGLVPLGCSAVLVR- 230 (345)
T ss_pred CCCCCCCCHHHHHHHHHHh------CCeEEEechhhHHHhhChhhHH-HhcCccccCEEEEchhHhhCCCcchHHHHHH-
Confidence 9999999999999999999 9999999999987764322111 1223458999999999999999999988764
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
++++|++++.++.+|++++ ++.++++++.+.|++.+.+
T Consensus 231 --------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (345)
T cd06450 231 --------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGF 270 (345)
T ss_pred --------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 6888999999999999988 9999999999999988654
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=2.1e-31 Score=257.69 Aligned_cols=301 Identities=27% Similarity=0.377 Sum_probs=230.0
Q ss_pred CHHHHHHHHHHhhhh---cCCCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 017569 38 PKEAAYQVINDELML---DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVAD 114 (369)
Q Consensus 38 ~~~~i~~~l~~~~~~---~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~ 114 (369)
+.+++++.+.+++.. -..++. +.++++. +.+.+.+++..++..+...+..+++..++++++++++++++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-- 76 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRI-LGSMCTN-PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD-- 76 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcE-EEEEeCC-chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC--
Confidence 357788888887543 223443 4455554 345556677677655555444467788889999999999999975
Q ss_pred CCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHH
Q 017569 115 DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVK 194 (369)
Q Consensus 115 ~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~ 194 (369)
..+++++||++++..++.+++.... .+..+++|++++++|+++.++++..|++++.+|++++ +.+|+++
T Consensus 77 ---~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~d~~~ 145 (373)
T TIGR03812 77 ---AYGYIVSGGTEANIQAVRAAKNLAR-------EEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDED-YTVDVKD 145 (373)
T ss_pred ---CCeEEeccHHHHHHHHHHHHHHHHh-------ccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC-CCcCHHH
Confidence 3478899999999888877654211 0112368999999999999999999999999999764 8999999
Q ss_pred HHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC---CccccccCCCCcEE
Q 017569 195 AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---DLEWDFRLPLVKSI 271 (369)
Q Consensus 195 L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~~~~~~~~~~~Dsi 271 (369)
|++++++++..++.+.++|++|.++|+++|+++|+++ ++|+|+|+||+++..++... ....++...++|++
T Consensus 146 l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~------~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~ 219 (373)
T TIGR03812 146 VEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN------GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSI 219 (373)
T ss_pred HHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc------CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEE
Confidence 9999998886666666899999999999999999999 99999999999876654321 11345555689999
Q ss_pred EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHH
Q 017569 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHK 349 (369)
Q Consensus 272 ~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a 349 (369)
++++|||+.+|.++|.+++++++.+ ..+....+|.... .++...|||+...+++++++++.++.+|++++ ++.+++
T Consensus 220 ~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~ 297 (373)
T TIGR03812 220 TIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT 297 (373)
T ss_pred EECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999989988988887765543 2222223454322 13344589988889999999999999999887 999999
Q ss_pred HHHHHHHHhcCC
Q 017569 350 KLSSFFVIHSSY 361 (369)
Q Consensus 350 ~~l~~~L~~~g~ 361 (369)
++|+++|++.|+
T Consensus 298 ~~l~~~L~~~g~ 309 (373)
T TIGR03812 298 RYLVEELKKIGF 309 (373)
T ss_pred HHHHHHHHhCCC
Confidence 999999999885
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.98 E-value=2.8e-30 Score=242.21 Aligned_cols=262 Identities=16% Similarity=0.101 Sum_probs=209.0
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCC----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~n~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
.++++.|.+.+.+..++....++|.+ +....++-++.++.+++++|+++ ..++||+||||+|.+++..+..
T Consensus 9 ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-----~eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-----EEIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEecCCcHHHHHHHHhhHH
Confidence 46677788999988888765555432 23556777789999999999997 3599999999999999998544
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh---cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
.+.. ...+..||+|...|.++...++++ |++|.++|++.+ |.+|+++|+++|+++|.+|.+.+.||.+|
T Consensus 84 a~~~-------~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v~~e~L~~al~~~T~LVSim~aNnE~G 155 (386)
T COG1104 84 AYRN-------AQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSN-GLVDLEQLEEALRPDTILVSIMHANNETG 155 (386)
T ss_pred hhhc-------ccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCC-CeEcHHHHHHhcCCCceEEEEEecccCee
Confidence 3221 112458999999999999999988 999999999985 99999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
++.|+++|+++|+++ ++++|+|++++.+-+ +.++...++|.+++|+||+. +|.|+|++++|+...+
T Consensus 156 ~IQpI~ei~~i~k~~------~i~fHvDAvQa~Gki-------pi~~~~~~vD~ls~SaHK~~-GpkGiGaLyv~~~~~~ 221 (386)
T COG1104 156 TIQPIAEIGEICKER------GILFHVDAVQAVGKI-------PIDLEELGVDLLSFSAHKFG-GPKGIGALYVRPGVRL 221 (386)
T ss_pred ecccHHHHHHHHHHc------CCeEEEehhhhcCce-------eccccccCcceEEeehhhcc-CCCceEEEEECCCCcc
Confidence 999999999999999 999999999987655 45666557999999999996 8999999999654322
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.+-..++.+......||-+...++++..+++.-- +.+... +...+-.+|.+.|.+.
T Consensus 222 ------~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 222 ------EPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred ------CceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2333455544434567887777777777766553 344444 7888889999999864
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.7e-29 Score=243.19 Aligned_cols=276 Identities=18% Similarity=0.106 Sum_probs=216.5
Q ss_pred CCCccccccccCCChHHHHHHHHHHhc---cCCCC--CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 55 NPRLNLASFVTTWMEPECDKLVMASIN---KNYVD--MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 55 ~p~~~l~~~~~~~~~~~v~~~~~~~~~---~n~~~--~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
.|...|-+..++..|..+.+.+.+++. .|.+. +......++..+++++.+++++|+++. ..+++|.|.|+|
T Consensus 21 ~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~----~eIvft~~tT~a 96 (405)
T COG0520 21 KPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS----DEIVFTRGTTEA 96 (405)
T ss_pred CCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChhHH
Confidence 343323344444556778888887653 34332 223345677888999999999999951 359999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTIC 205 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~ 205 (369)
+.+...++...+. .+++||+++..|++ |...++..|++++++|+++ ++.+|.+++++.++++|++
T Consensus 97 ln~va~~l~~~~~----------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~-~g~~~~~~~~~~i~~~Tkl 165 (405)
T COG0520 97 LNLVARGLGRSLK----------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD-DGLLDLDALEKLITPKTKL 165 (405)
T ss_pred HHHHHHHhhhhhc----------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC-CCCcCHHHHHHhcCCCceE
Confidence 9998888753211 24799999999987 5666677799999999985 5999999999999999999
Q ss_pred EEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe
Q 017569 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (369)
Q Consensus 206 v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~ 285 (369)
|.+++.+|.||.+.|+++|+++||++ |+|++||+|++.+.. ++|++..++|++.+|+|||+++|.|+
T Consensus 166 vais~vSn~tG~~~pv~~I~~la~~~------ga~v~VDaaq~~~h~-------~idv~~l~~Df~afsgHKwl~gP~Gi 232 (405)
T COG0520 166 VALSHVSNVTGTVNPVKEIAELAHEH------GALVLVDAAQAAGHL-------PIDVQELGCDFLAFSGHKWLLGPTGI 232 (405)
T ss_pred EEEECccccccccchHHHHHHHHHHc------CCEEEEECccccCcc-------CCCchhcCCCEEEEcccccccCCCce
Confidence 99999999999999999999999999 999999999997665 46777779999999999999999999
Q ss_pred EEEEEeCCCCcccccccccCccCCC-----CC--Cc--------cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHH
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSD-----QP--TF--------TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDH 348 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~-----~~--~~--------~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~ 348 (369)
|+|++|+. .+ +.+ .+...++. .. .. ...||.+...++.+-++++.+...|+..+ +..++
T Consensus 233 GvLy~r~~-~l-~~l--~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L 308 (405)
T COG0520 233 GVLYVRKE-LL-EEL--EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHEREL 308 (405)
T ss_pred EEEEEchH-HH-hhc--CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999864 22 121 11111111 00 00 12488888889999999999999999988 99999
Q ss_pred HHHHHHHHHhcCCC
Q 017569 349 KKLSSFFVIHSSYF 362 (369)
Q Consensus 349 a~~l~~~L~~~g~~ 362 (369)
++|+.++|++.+.+
T Consensus 309 ~~~~~~~L~~~~~v 322 (405)
T COG0520 309 TEYLLEGLSELPGV 322 (405)
T ss_pred HHHHHHHHhcCCCe
Confidence 99999999998754
No 19
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=2.6e-27 Score=228.54 Aligned_cols=260 Identities=15% Similarity=0.078 Sum_probs=199.7
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCC-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
+++.++.+.+++.+++.....++.. +....++.+++++.+++++|.+++ .+++|+|+|+++.+++.++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-----EIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 4456677888888776543333221 234466677889999999999852 489999999999999887654
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh---hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
.+. ..+++|+++...|+++...+. ..|++++.+|++++ +.+|+++|++++++++++|++++++|+||
T Consensus 83 ~~~---------~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~v~~~~n~tG 152 (364)
T PLN02651 83 FYK---------DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD-GLVDLDELAAAIRPDTALVSVMAVNNEIG 152 (364)
T ss_pred hcc---------CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEECCCCCce
Confidence 211 124689999999988655443 45889999998764 89999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
.+.|+++|+++|+++ ++++|||++++.+..| +++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~l~~I~~~~~~~------g~~~~vD~a~~~g~~~-------~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~ 218 (364)
T PLN02651 153 VIQPVEEIGELCREK------KVLFHTDAAQAVGKIP-------VDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRV 218 (364)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhhCCcc-------cCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCC
Confidence 999999999999999 9999999999976652 445555799999999999 68999999999875321
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
.+ .+.+.++........||.+...++++..+|..+... .+.+ ++.++++++.+.|.+
T Consensus 219 --~l--~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 219 --RL--EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred --CC--CccccCCCccCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHh
Confidence 11 222222222111235899988899999999998654 4665 999999999999975
No 20
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.96 E-value=9.4e-28 Score=233.62 Aligned_cols=300 Identities=14% Similarity=0.075 Sum_probs=211.7
Q ss_pred HhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCc-cccccccCCChH-HHHHHHHH-Hhc--c------CC--CCCC-
Q 017569 23 VRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRL-NLASFVTTWMEP-ECDKLVMA-SIN--K------NY--VDMD- 88 (369)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~-~l~~~~~~~~~~-~v~~~~~~-~~~--~------n~--~~~~- 88 (369)
++..+.+-.+|++|.+.+.|...+.++-.++.+... |.+.+. .+. ....++.+ .++ . +. .++.
T Consensus 21 ~~~~~~~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~ge---re~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka 97 (444)
T TIGR03531 21 IERLLEQRKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGE---REGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKA 97 (444)
T ss_pred HHHHHHcCcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCc---ccceeechhhhhcccceecCCCCcccccccCccc
Confidence 355666778999999999999999988765533222 111111 111 11222221 111 0 11 1111
Q ss_pred -CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 017569 89 -EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (369)
Q Consensus 89 -~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s 166 (369)
.++....+.+++.+++++++|.+.. ...++++||| .++.+++.+++.. ...+++||+|..+|.+
T Consensus 98 ~gss~~~~l~~~~e~~~~~~~G~~~~----~~a~~v~~~Tg~al~laL~alr~~----------~~~gd~VI~p~~th~S 163 (444)
T TIGR03531 98 AGSSLLYKLTNKLVKDFLKLLGLRSI----KSAFVVPLATGMSLSLCLSALRHK----------RPKAKYVIWPRIDQKS 163 (444)
T ss_pred cCccHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHHcCCc----------CCCCCEEEEECcChHH
Confidence 1234678889999999999999831 2378899999 7888888776531 1124689999999999
Q ss_pred HHHHHhhhcceeEEEec--cCCccccCHHHHHHHHhh---cCcEEEEeeCC-CCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 167 WEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGS-TLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~-~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
+.+++.+.|++++.||+ +++++.+|+++|+++|++ +++++++++++ +.+|.++|+++|+++|+++ ++|
T Consensus 164 ~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~------gI~ 237 (444)
T TIGR03531 164 CIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY------DIP 237 (444)
T ss_pred HHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc------CCE
Confidence 99999999999999995 566799999999999986 44555555554 4556889999999999999 999
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCc
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr 320 (369)
+|+|+|||.+.. +..+.....+....+|++++|+||++++|.++|++++++++.. ..+. ..|.+ ..
T Consensus 238 lIvDaAyg~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~-~~i~--~~y~g----------~~ 303 (444)
T TIGR03531 238 HIVNNAYGLQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFI-QEIS--KSYPG----------RA 303 (444)
T ss_pred EEEECcCcCcCh-hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHH-HHHH--HhccC----------CC
Confidence 999999996332 1111111122233589999999999999988888888876554 2221 12322 11
Q ss_pred chhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 321 GSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 321 ~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+...+..+|+++..+|.+|++++ +..++++++.++|++.
T Consensus 304 ~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 304 SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22357889999999999999999 8999999999999874
No 21
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.95 E-value=4e-26 Score=227.27 Aligned_cols=300 Identities=11% Similarity=0.018 Sum_probs=209.7
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhhcCC--CCcccccc-ccCCChHHHHHHHHHHh-ccCCCCC--C-CCcchHHHHHHHHH
Q 017569 30 FKMPDNSMPKEAAYQVINDELMLDGN--PRLNLASF-VTTWMEPECDKLVMASI-NKNYVDM--D-EYPVTTELQNRCVN 102 (369)
Q Consensus 30 ~~~p~~~~~~~~i~~~l~~~~~~~~~--p~~~l~~~-~~~~~~~~v~~~~~~~~-~~n~~~~--~-~~~~~~~le~~~~~ 102 (369)
..+|+ .++.++++.++++...+.. ..| ++.+ .....+|.+.+.+.+.- ..+.+.| . .+++..+++.++++
T Consensus 44 ~~~~~--~se~~~~~~~~~l~~~n~~~~~~~-~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~ 120 (481)
T PRK04366 44 PELPE--VSELEVVRHYTRLSQKNYGVDTGF-YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQE 120 (481)
T ss_pred CCCCC--CCHHHHHHHHHHHHhcCCCCCcce-ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHH
Confidence 45666 8999999999988765533 122 2333 22334566666665541 1233333 2 56688899999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
++++++|++. ..+..++|+.+.+.++..++.... ..|. ..+++|+++++.|+++...++..|++++.+|
T Consensus 121 ~la~l~G~~~------~~l~~~~GA~a~~~~l~~~r~~~~----~~Gd-~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~ 189 (481)
T PRK04366 121 WLKEITGMDA------VTLQPAAGAHGELTGLLMIRAYHE----ARGD-TKRTEVIVPDSAHGTNPASAAMAGFKVVEIP 189 (481)
T ss_pred HHHHHhCCCc------eEEEeCcHHHHHHHHHHHHHHHhh----ccCc-CCCCEEEEcCCccHhHHHHHHHcCCEEEEee
Confidence 9999999974 144445666666555444332110 0111 1245899999999999999999999999999
Q ss_pred ccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc
Q 017569 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (369)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (369)
++++ +.+|+++|++++++++++|++++|+ ++|.+ +|+++|+++|+++ ++|+|||+|+..+..+.+.
T Consensus 190 ~~~~-~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~------gal~iVD~a~~~~~~g~~~----- 256 (481)
T PRK04366 190 SNED-GLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA------GGLLYYDGANLNAILGKAR----- 256 (481)
T ss_pred cCCC-CCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc------CCEEEEEecChhhhcccCC-----
Confidence 9764 8999999999999999999999987 89988 5899999999999 9999999998654332221
Q ss_pred cccCCCCcEEEEcCccCCCCCCC-----eEEEEEeCCCCcccccccc------cCccCCCCCCcc----ccCCcchhHHH
Q 017569 262 DFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFH------INYLGSDQPTFT----LNFSKGSSQII 326 (369)
Q Consensus 262 ~~~~~~~Dsi~~~~hK~l~~p~g-----~g~l~~~~~~~~~~~~~~~------~~y~~~~~~~~~----l~~tr~~~~~l 326 (369)
....++|++++++|||+++|.| +|+++++++ .. +.+... ..|.-..+.... -.+|.++..++
T Consensus 257 -~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~ 333 (481)
T PRK04366 257 -PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLV 333 (481)
T ss_pred -ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhCCCCeeeccCCceeecccccccCCCcccccCchHHHH
Confidence 1244899999999999987754 568888764 21 121100 011100000000 11233456689
Q ss_pred HHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 327 AQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 327 ~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++|..+..+|.+|++++ +++++|+||+++|++.
T Consensus 334 ~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 334 RAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 99999999999999997 8899999999999986
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=3.5e-26 Score=219.76 Aligned_cols=266 Identities=15% Similarity=0.103 Sum_probs=197.5
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCC-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
.+++++.+.+++.+++.....++.. .....++.+++++++++++|++++ .+++|+|+++++..++.++..
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-----EVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 3355677888888777432222221 112345667899999999999862 489999999999988887654
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
. +....++.|+++...|+++.... +..|++++.+|++++ +.+|+++|++++++++++|++++++|+||
T Consensus 82 ~--------~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG 152 (353)
T TIGR03235 82 A--------GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-GRIDVDELADAIRPDTLLVSIMHVNNETG 152 (353)
T ss_pred h--------cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhCCCCCEEEEEEcccCCce
Confidence 2 11111367999999998865544 446999999998864 78999999999998999999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
.+.|+++|+++|+++ ++|+|+|++++.+..+ +++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~~~~I~~l~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~ 218 (353)
T TIGR03235 153 SIQPIREIAEVLEAH------EAFFHVDAAQVVGKIT-------VDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKP 218 (353)
T ss_pred eccCHHHHHHHHHHc------CCEEEEEchhhcCCcc-------ccccccCCCEEEeehhhc-CCCCceEEEEEccCccc
Confidence 999999999999999 9999999998876552 344445799999999999 57999999999875321
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
... ..+.+.++........||.+....+++..+++.+. +|.+++ ++.++++++++.|++.|+
T Consensus 219 ~~~--~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~ 282 (353)
T TIGR03235 219 KAP--LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGV 282 (353)
T ss_pred ccc--cCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCe
Confidence 111 11222222111112246777777888888888764 577666 999999999999988664
No 23
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=3.6e-26 Score=221.31 Aligned_cols=263 Identities=15% Similarity=0.071 Sum_probs=198.7
Q ss_pred CChHHHHHHHHHHhccCCCC--CCCCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD--MDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~--~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
++++.+.+.+.++++.+... +..++ ......+++++++++++|.+.. ..+.+|+|+++++.+++.+...
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~-- 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS----AHVVFTNNATTALNIALKGLLK-- 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHhccC--
Confidence 44567888887777653222 11222 2345666788889999998742 2488999999999888776433
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHH----HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
.+++|+++..+|.++. ..++..|++++.++++.+ +.+|+++|++++++++++|++++++|+||.
T Consensus 85 -----------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 85 -----------EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GLISPERIKRAIKTNTKLIVVSHASNVTGT 152 (376)
T ss_pred -----------CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHhcCCCCeEEEEECCCCCccc
Confidence 1478999999998754 345566999999998764 789999999999989999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.|+++|.++|+++ ++++++|++++.+..+ +++...++|++++++|||+++|.|+|+++++++..+.
T Consensus 153 ~~~~~~i~~l~~~~------~~~livD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 153 ILPIEEIGELAQEN------GIFFILDAAQTAGVIP-------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLK 219 (376)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhccCccC-------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcC
Confidence 99999999999999 9999999999876652 3444558999999999999999999999998765321
Q ss_pred cccccccC----ccCCCC---CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 298 DELVFHIN----YLGSDQ---PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 298 ~~~~~~~~----y~~~~~---~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
........ +..... ..+ -.+|.+....++++.+++.+..+|++.+ ++.++++++++.|.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~r~-~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~ 291 (376)
T TIGR01977 220 PLKSGGTGSHSALIDQPSELPDRF-ESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINK 291 (376)
T ss_pred ceecCCCccccccccccccchhhc-cCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 11110000 000000 001 1267777778999999999999999888 999999999999997664
No 24
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=1.7e-26 Score=217.63 Aligned_cols=246 Identities=18% Similarity=0.108 Sum_probs=192.4
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCCCCC-c--chH-HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDMDEY-P--VTT-ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~-~--~~~-~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
+....+++.++.|.+++..++.....+|... . ... ++| +.|+.+|+++|+++. .++||+|+||||.+++.
T Consensus 47 ld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E-~aR~~VAklInAd~~-----dIiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVE-AAREQVAKLINADPS-----DIVFTSGATESNNLVLK 120 (428)
T ss_pred EecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHH-HHHHHHHHHhCCCCC-----cEEEeCCchHHHHHHHH
Confidence 4444556677889998888776544443322 2 223 344 789999999999973 39999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh---cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
...... +. ..+..||+....|.++...++.+ |++++++|++ +++..|.+.+++.|+++|++|.+.+.+
T Consensus 121 ~v~~~~-------~~-~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~~T~lv~I~~Vn 191 (428)
T KOG1549|consen 121 GVARFF-------GD-KTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGLVDISKLREAIRSKTRLVSIMHVN 191 (428)
T ss_pred Hhhccc-------cc-cccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-ccccccHHHHHHhcCCCceEEEEEecc
Confidence 865431 11 11227999999999988888754 8999999998 468999999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
|..|.+.|+++|+++|++. ++.+|+|+|++.+-. +.|++..++|.+++++|||+ +|+|+|+|++|.
T Consensus 192 n~~gv~~Pv~EI~~icr~~------~v~v~~DaAQavG~i-------~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 192 NEIGVLQPVKEIVKICREE------GVQVHVDAAQAVGKI-------PVDVQELNADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred cCccccccHHHHHHHhCcC------CcEEEeehhhhcCCc-------cccHHHcCchheeeeccccc-CCCcceEEEEcc
Confidence 9999999999999999999 999999999997655 56777779999999999997 555599999986
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~ 337 (369)
.. ..+...+.+.++.+..-...||+....++.+-.+.+..-.
T Consensus 258 ~~---~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~ 299 (428)
T KOG1549|consen 258 KR---PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK 299 (428)
T ss_pred CC---CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHh
Confidence 21 2233456777776543345688888888888888887743
No 25
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=2.7e-26 Score=241.34 Aligned_cols=296 Identities=11% Similarity=0.028 Sum_probs=208.5
Q ss_pred CCHHHHHHHHHHhhhhcCC---CCccccccccCCChHHHHHHHHH---HhccCCCCC-CCCcchHHHHHHHHHHHHHHhC
Q 017569 37 MPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVMA---SINKNYVDM-DEYPVTTELQNRCVNMIAHLFN 109 (369)
Q Consensus 37 ~~~~~i~~~l~~~~~~~~~---p~~~l~~~~~~~~~~~v~~~~~~---~~~~n~~~~-~~~~~~~~le~~~~~~la~l~g 109 (369)
.++.++++.++++-..+.. ..+.+++ ++....+.+.+.+.. +.+-.++.+ +.+++..+++.++.+|+++++|
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG 556 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG 556 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3888999999988766532 2234544 666555554444332 222233444 3456788999999999999999
Q ss_pred CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccc
Q 017569 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (369)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~ 189 (369)
++. .....+||+.|++.++++++.... ..|. .++.+|++|+..|.+....+..+|++++.||++++ +.
T Consensus 557 ~d~------~sl~~~~ga~ge~agL~a~r~~~~----~~G~-~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~-G~ 624 (954)
T PRK05367 557 YDA------VSLQPNAGAQGEYAGLLAIRAYHE----SRGE-GHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN-GN 624 (954)
T ss_pred CCC------EEECccHHHHHHHHHHHHHHHHhh----ccCC-CCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC-CC
Confidence 984 234456888999888877765311 1121 12458999999999999999999999999999874 89
Q ss_pred cCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCC
Q 017569 190 MNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (369)
Q Consensus 190 ~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (369)
+|+++|++++++ ++.+|++++|++..+..+|+++|+++|+++ |+|+|||+|+.....++..| ...
T Consensus 625 iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~------G~~v~VDgA~~~al~~l~~p------g~~ 692 (954)
T PRK05367 625 IDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEH------GGQVYLDGANMNAQVGLARP------GDI 692 (954)
T ss_pred cCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHc------CCEEEEECcChhhccCCCCh------hhc
Confidence 999999999976 467889999998844458999999999999 99999999997655433222 134
Q ss_pred CCcEEEEcCccCCCCCCC-----eEEEEEeCCCCcccccccccCccCCCCCCccccCCc---chhHHHHHHHHHHHhcHh
Q 017569 267 LVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK---GSSQIIAQYYQFIRLGFE 338 (369)
Q Consensus 267 ~~Dsi~~~~hK~l~~p~g-----~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr---~~~~~l~~~~~l~~lg~~ 338 (369)
++|++++|+|||+++|.| +|++++|+. +...+.....-............+. ++..++..|++++.+|.+
T Consensus 693 GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~ 770 (954)
T PRK05367 693 GADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAE 770 (954)
T ss_pred CCCEEEecCcccCCCCcCCCCCceEEEeeccc--ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHH
Confidence 899999999999876665 569998742 2222211110000000000111122 124567799999999999
Q ss_pred hHHHH--HhhHHHHHHHHHHHhc
Q 017569 339 VIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 339 G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|++++ +++.+|+|++++|++.
T Consensus 771 Glr~~a~~~~~~A~Yl~~~L~~~ 793 (954)
T PRK05367 771 GLRQATEVAILNANYIAKRLKDH 793 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999 8999999999999763
No 26
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.95 E-value=2.5e-25 Score=230.51 Aligned_cols=292 Identities=11% Similarity=0.036 Sum_probs=214.3
Q ss_pred CHHHHHHHHHHhhhhcCC---CCccccccccCCChHHHHHHHH----HHhccCCCCCC-CCcchHHHHHHHHHHHHHHhC
Q 017569 38 PKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVM----ASINKNYVDMD-EYPVTTELQNRCVNMIAHLFN 109 (369)
Q Consensus 38 ~~~~i~~~l~~~~~~~~~---p~~~l~~~~~~~~~~~v~~~~~----~~~~~n~~~~~-~~~~~~~le~~~~~~la~l~g 109 (369)
++.++++.++.+-..+.. .-+.+++ ++... +.+.+.+. ++++-.++.+. .++|..+++.++.+|+++++|
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGs-ctmk~-na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltG 544 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGS-CTMKL-NATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITG 544 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCcc-CCCcc-CHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHC
Confidence 889999999887665432 2222222 22222 33344442 33433344444 466899999999999999999
Q ss_pred CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccc
Q 017569 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (369)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~ 189 (369)
++. .+...+||+.|.+.+++++|.... . .|. .++.+|++|...|.+....++..|++++.||++++ +.
T Consensus 545 md~------~Sl~p~aGA~gE~agL~aiR~y~~-~---rge-~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~-G~ 612 (939)
T TIGR00461 545 FDA------ISLQPNSGAQGEYAGLRVIRSYHE-S---RGE-NHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD-GN 612 (939)
T ss_pred CCC------cccCCchHHHHHHHHHHHHHHHHH-h---cCC-CCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC-CC
Confidence 994 367778899999888888876431 1 121 23568999999998888889999999999999864 89
Q ss_pred cCHHHHHHHHhh---cCcEEEEeeCCCCcccCCC-HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC
Q 017569 190 MNPVKAVELVDE---NTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (369)
Q Consensus 190 ~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~-l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (369)
+|+++|++++++ ++++|++++|+| +|.++| +++|+++|+++ +.++++|+|+.........| ..
T Consensus 613 iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~------G~~v~VDgAq~~al~~l~~P------g~ 679 (939)
T TIGR00461 613 IDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF------GGQVYLDGANMNAQVGLTSP------GD 679 (939)
T ss_pred cCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc------CCEEEEEecChhhCCCCCCc------cc
Confidence 999999999984 889999999999 699977 99999999999 99999999986533311111 24
Q ss_pred CCCcEEEEcCccCCC-----CCCCeEEEEEeCCCCccccccccc---CccC-CCCCC--ccc-cCCcchhHHHHHHHHHH
Q 017569 266 PLVKSINVSGHKYGL-----VYAGVGWVVWRTKDDLPDELVFHI---NYLG-SDQPT--FTL-NFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~-----~p~g~g~l~~~~~~~~~~~~~~~~---~y~~-~~~~~--~~l-~~tr~~~~~l~~~~~l~ 333 (369)
.++|++++|.||+++ +|+|.|++++|+. +...+.... .+-. +.... .+. .+++++..++..|++|+
T Consensus 680 ~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~ 757 (939)
T TIGR00461 680 LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIK 757 (939)
T ss_pred cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHH
Confidence 589999999999988 5566699999853 322222110 0000 01111 122 26777778899999999
Q ss_pred HhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 334 RLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 334 ~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
.+|.+|++++ .++.+|+|++++|.+
T Consensus 758 ~lG~~GL~~~a~~ailnAnYl~~rL~~ 784 (939)
T TIGR00461 758 MMGNEGLPKASVVAILNANYMATRLKD 784 (939)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999998 899999999999987
No 27
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=3.3e-25 Score=216.74 Aligned_cols=265 Identities=17% Similarity=0.103 Sum_probs=197.2
Q ss_pred cccCCChHHHHHHHHHHhccCCCCCCC--C---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 63 FVTTWMEPECDKLVMASINKNYVDMDE--Y---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 63 ~~~~~~~~~v~~~~~~~~~~n~~~~~~--~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
..+++.++.+.+++..++.....++.. . ....+..+++++.+++++|++++ .+++|+|+|+++.+++.++
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l 84 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-----EIVFTSGATESNNLAIKGI 84 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHH
Confidence 334566677888887777543333221 1 11235566788899999999752 4899999999999988776
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh---hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
...+. ..+++|+++..+|+++...+. ..|++++.||++++ +.+|+++|++++++++++|++++++|+
T Consensus 85 ~~~~~---------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~v~~~~n~ 154 (402)
T TIGR02006 85 AHFYK---------SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLIDLEELKAAIRDDTILVSIMHVNNE 154 (402)
T ss_pred HHhhc---------CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECCCcC
Confidence 53210 124689999999998776653 45999999998864 889999999999989999999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
+|.+.|+++|+++|+++ ++++|+|++++.+..| +++...++|++++++||++ +|.|+|+++++++.
T Consensus 155 tG~~~~~~~I~~l~~~~------g~~livD~a~a~g~~~-------~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~ 220 (402)
T TIGR02006 155 IGVIQDIAAIGEICRER------KVFFHVDAAQSVGKIP-------INVNELKVDLMSISGHKIY-GPKGIGALYVRRKP 220 (402)
T ss_pred ceecccHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCccccCCCEEEEehhhhc-CCCceEEEEEccCC
Confidence 99999999999999999 9999999999876552 3444458999999999975 79999999998653
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
... + .+.+.++........||.+....+++..+++.+. +++..+ +..++++++++.|++++.
T Consensus 221 ~~~--~--~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~ 284 (402)
T TIGR02006 221 RVR--L--EALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEE 284 (402)
T ss_pred CCC--C--CceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 321 1 1111122111111246777777888888888774 466666 999999999999987653
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=3.1e-25 Score=216.58 Aligned_cols=267 Identities=18% Similarity=0.127 Sum_probs=198.2
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCC--CC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDM--DE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~--~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
|.+...++.++.+.+++.++++....++ .. .....+..+++++.+++++|++.. ..+++|+|+|+++.+++
T Consensus 20 ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 20 LDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA----ENIVWTRGTTESINLVA 95 (398)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChHHHHHHHH
Confidence 4444445566778888888775322221 11 123445567888999999999521 24889999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.... -..+++|++++++|++ +...++..|++++.+|++.+ +.+|+++|+++++++|++|++++
T Consensus 96 ~~~~~~~---------~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~ 165 (398)
T TIGR03392 96 QSYARPR---------LQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLPDIRQLPELLTPRTRILALGQ 165 (398)
T ss_pred HHhhhcc---------CCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHHhccCceEEEEEC
Confidence 8763210 0124689999999976 45567888999999999865 78999999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
++|+||.+.|+++|+++|+++ ++++++|++|+.+..+ .++...++|.+++++||+ ++|.|+|++++
T Consensus 166 ~~n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~-------~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~ 231 (398)
T TIGR03392 166 MSNVTGGCPDLARAITLAHQY------GAVVVVDGAQGVVHGP-------PDVQALDIDFYAFSGHKL-YGPTGIGVLYG 231 (398)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCCC-------CChhhcCCCEEEEecccc-cCCCceEEEEE
Confidence 999999999999999999999 9999999999754432 233334689999999995 57899999987
Q ss_pred eCCCCcccccccccCccCCCC----------------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHH
Q 017569 291 RTKDDLPDELVFHINYLGSDQ----------------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLS 352 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~----------------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l 352 (369)
+++ .. ..+. .+.++.. ..+ ..||.+....+++.++++.+...|+.++ +..++++++
T Consensus 232 ~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l 305 (398)
T TIGR03392 232 KTE-LL-EAMP---PWQGGGKMLSHVSFDGFIPQAVPHRF-EAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLA 305 (398)
T ss_pred cHH-HH-hhCC---CeecCCceEeeccccccccCCChhhc-cCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 643 22 1111 1111100 011 2478888889999999999877888777 889999999
Q ss_pred HHHHHhcC
Q 017569 353 SFFVIHSS 360 (369)
Q Consensus 353 ~~~L~~~g 360 (369)
++.|.+++
T Consensus 306 ~~~l~~l~ 313 (398)
T TIGR03392 306 EERLAQLP 313 (398)
T ss_pred HHHHhcCC
Confidence 99998874
No 29
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=7.5e-25 Score=212.53 Aligned_cols=257 Identities=14% Similarity=0.064 Sum_probs=193.4
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCC-C---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDE-Y---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~-~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.++.++.+.+++.++++....++.. + +...++.+++++++++++|+++ ..+++|+|+|+++.+++.++...
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~t~~~t~a~~~al~~~~~~ 82 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEP-----DEIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 4455677888888777543333221 1 2345667789999999999975 24899999999999998876532
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHh---hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
.+ .+++|+++..+|+++...+. ..|++++.+|++.+ +.+|++++++++++++++|++++++|++|.
T Consensus 83 ~~----------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~ 151 (379)
T TIGR03402 83 QP----------EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE-GRLDLEELRAAITDDTALVSVMWANNETGT 151 (379)
T ss_pred cC----------CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEEcccCCeee
Confidence 10 13589999999988765443 35999999998764 789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.|+++|+++|+++ |+++|+|++++.+.. ++++...++|++++++|| +++|.|+|++++++...+
T Consensus 152 ~~~~~~I~~l~~~~------g~~vivD~~~~~g~~-------~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~- 216 (379)
T TIGR03402 152 IFPIEEIGEIAKER------GALFHTDAVQAVGKI-------PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF- 216 (379)
T ss_pred cccHHHHHHHHHHc------CCEEEEECccccccc-------ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC-
Confidence 99999999999999 999999999986544 244444589999999999 568999999999864321
Q ss_pred cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
.+.+.++........||.+....+++..+++.+- ++++++ +..++.+++++.|.+
T Consensus 217 -----~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 217 -----RPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred -----CCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh
Confidence 1222222111111247777777788888887763 456665 888999999999875
No 30
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=4e-25 Score=213.83 Aligned_cols=264 Identities=16% Similarity=0.075 Sum_probs=195.7
Q ss_pred CChHHHHHHHHHHhccCCCCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
++++.+.+++.+.+......+ ..++...+...++++++++++|.+.. ..+++|+|+++++.+++.++...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~a~~~~~~~l~~~- 84 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP----DEIIFTRNTTEAINLVAYGLGRA- 84 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCCHHHHHHHHHHHhhhc-
Confidence 444667777766664322211 12244566777888999999998721 34889999999999988887541
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchH----HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
...+++|++++++|++. ...++..|++++.||++. ++.+|+++|++++++++++|++++++|++|.
T Consensus 85 ---------~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 85 ---------NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLTERTKLVAVTHVSNVLGT 154 (373)
T ss_pred ---------CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCcCHHHHHHHhcCCceEEEEeCcccccCC
Confidence 01246899999999884 445667899999999985 4899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.|+++|.++|+++ ++++|+|++++.+..+ +++...++|++++++|||+++ .|+|+++++++ ..
T Consensus 155 ~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~- 218 (373)
T cd06453 155 INPVKEIGEIAHEA------GVPVLVDGAQSAGHMP-------VDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL- 218 (373)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhhcCcee-------eeccccCCCEEEeccccccCC-CCcEEEEEchH-Hh-
Confidence 99999999999999 9999999998865542 233334789999999999876 88899988653 22
Q ss_pred ccccc-ccCcc--------CCC----CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 298 DELVF-HINYL--------GSD----QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 298 ~~~~~-~~~y~--------~~~----~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
..+.. ...+. ... ...+ ..+|.+....+++|.+++.+..+|++++ ++.++++++++.|++++.+
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~ 297 (373)
T cd06453 219 EEMPPYGGGGEMIEEVSFEETTYADLPHKF-EAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGV 297 (373)
T ss_pred hcCCCeecCCCccccccccccccCCCcccc-CCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 11111 00000 000 0011 1257777778999999999999999887 8899999999999988643
No 31
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=7.9e-25 Score=214.31 Aligned_cols=267 Identities=16% Similarity=0.088 Sum_probs=199.4
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
|-+...++.++.+.+++.++++....++ ..+....+..+++++.+++++|.... ..+++|+|+|+++..++
T Consensus 27 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~~l~~~~ 102 (406)
T PRK09295 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA----EELVFVRGTTEGINLVA 102 (406)
T ss_pred EeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC----CeEEEeCCHHHHHHHHH
Confidence 4444455666778888887775422111 11234456666789999999998421 24899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.... -..+++|++++.+|++ +...++..|++++.+|++++ +.+|+++|+++++++|++|++++
T Consensus 103 ~~~~~~~---------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~l~~ 172 (406)
T PRK09295 103 NSWGNSN---------VRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPALFDERTRLLAITH 172 (406)
T ss_pred HHhhhhc---------CCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCCCHHHHHHhcCCCcEEEEEec
Confidence 7653210 0124689999998875 45566778999999999864 78999999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
++|+||.+.|+++|+++|+++ ++++++|++|+.+.. ++++...++|++++|+|| +++|.|+|++++
T Consensus 173 ~~n~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~-------~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~ 238 (406)
T PRK09295 173 VSNVLGTENPLAEMIALAHQH------GAKVLVDGAQAVMHH-------PVDVQALDCDFYVFSGHK-LYGPTGIGILYV 238 (406)
T ss_pred chhcccccCCHHHHHHHHHHc------CCEEEEEcccccCcc-------ccCchhcCCCEEEeehhh-ccCCCCcEEEEE
Confidence 999999999999999999999 999999999986544 234444579999999999 457999999998
Q ss_pred eCCCCcccccccccCccCCC---------C--------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHH
Q 017569 291 RTKDDLPDELVFHINYLGSD---------Q--------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKL 351 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~---------~--------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~ 351 (369)
+++ .+ ..+. ++.++. . ..+ ..||++....+++..+++.+...|++.+ +..+++++
T Consensus 239 ~~~-~~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~r~-e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 312 (406)
T PRK09295 239 KEA-LL-QEMP---PWEGGGSMIATVSLTEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_pred chH-hH-hhCC---CcccCCceeeeeecCCccccCCchhhc-CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 754 21 1111 111100 0 011 2478988889999999999988888877 88899999
Q ss_pred HHHHHHhcC
Q 017569 352 SSFFVIHSS 360 (369)
Q Consensus 352 l~~~L~~~g 360 (369)
+++.|.+.+
T Consensus 313 l~~~l~~~~ 321 (406)
T PRK09295 313 ALSQLESVP 321 (406)
T ss_pred HHHHHhcCC
Confidence 999998765
No 32
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=7.3e-25 Score=214.19 Aligned_cols=264 Identities=17% Similarity=0.111 Sum_probs=198.7
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCCCC-----CcchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCCchHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
|.+...++.++.+.+++.++++....++.. +....+..+++++.+++++|+ ++ ..+++|+|+|+++.++
T Consensus 23 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~~i~~~~~~t~~i~~~ 97 (401)
T PRK10874 23 LDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA-----KNIVWTRGTTESINLV 97 (401)
T ss_pred EeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC-----CEEEEECCHHHHHHHH
Confidence 444444556677888888877543322211 133456667889999999999 43 3488999999999988
Q ss_pred HHHHHHH-HHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEE
Q 017569 134 GLAFKRK-WQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 134 l~~~~~~-~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
+.++... + ..+++|++++++|++ +...++..|++++.+|++.+ +.+|+++++++++++|++|++
T Consensus 98 ~~~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~i 166 (401)
T PRK10874 98 AQSYARPRL----------QPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD-RLPDVDLLPELITPRTRILAL 166 (401)
T ss_pred HHHhhhccC----------CCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC-CcCCHHHHHHhcCcCcEEEEE
Confidence 8876321 1 124689999999976 45667788999999999764 899999999999999999999
Q ss_pred eeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEE
Q 017569 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (369)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l 288 (369)
++++|+||.+.|+++|+++|+++ ++++++|++|+.+..+ .++...++|.++.++||+ ++|.|+|++
T Consensus 167 ~~~~n~tG~~~~~~~i~~l~~~~------g~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~-~gp~G~G~l 232 (401)
T PRK10874 167 GQMSNVTGGCPDLARAITLAHQA------GMVVMVDGAQGAVHFP-------ADVQALDIDFYAFSGHKL-YGPTGIGVL 232 (401)
T ss_pred eCCcccccCcCCHHHHHHHHHHc------CCEEEEECCccccccc-------CCchhcCCCEEEEecccc-cCCCccEEE
Confidence 99999999999999999999999 9999999999754442 233334699999999995 579999999
Q ss_pred EEeCCCCcccccccccCccCCC----------------CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHH
Q 017569 289 VWRTKDDLPDELVFHINYLGSD----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKK 350 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~----------------~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~ 350 (369)
+++++ .+. .+. .+.++. ...+ ..||.+....+++..++..+...|+..+ ++.++++
T Consensus 233 ~~~~~-~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~ 306 (401)
T PRK10874 233 YGKSE-LLE-AMS---PWQGGGKMLTEVSFDGFTPQSAPWRF-EAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLAT 306 (401)
T ss_pred EEchH-HHh-cCC---CeecCCcceEeeccCccCCCCChhhc-cCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 98653 221 111 111110 0011 1378888788999999999888888777 8888999
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
++++.|+++
T Consensus 307 ~l~~~l~~~ 315 (401)
T PRK10874 307 LAEDALAKL 315 (401)
T ss_pred HHHHHHhcC
Confidence 999999886
No 33
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=1.2e-24 Score=210.53 Aligned_cols=268 Identities=15% Similarity=0.031 Sum_probs=203.2
Q ss_pred ccCCChHHHHHHHHHHhcc---CC--CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINK---NY--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~---n~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (369)
.+++.++.+.+.+.+.+.. |+ ..+..+....++.+++++.+++++|++++ ...++++|+|+++..++..+.
T Consensus 7 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~----~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 7 GTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD----EEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp SS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT----EEEEEESSHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc----cccccccccchhhhhhhhccc
Confidence 3445667788888877543 32 11223345677778999999999999962 348899999999999988886
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
..+. .+++|+++...|++.. ..++..|++++.++.+.+ +.+|+++++++|++++++|++++.+|.
T Consensus 83 ~~~~----------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~~~~~~~~~~~l~~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 83 NPLK----------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-GSLDLEDLEEALNPDTRLVSISHVENS 151 (371)
T ss_dssp HHGT----------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-SSCSHHHHHHHHHTTESEEEEESBETT
T ss_pred cccc----------cccccccccccccccccccccccccchhhhcccccccc-chhhhhhhhhhhccccceEEeeccccc
Confidence 5321 2468999999998866 444567999999999875 799999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
+|.+.|+++|+++|+++ ++++++|++++.+.. ++++...++|.+++++|| +++|+|+|+++++++
T Consensus 152 tG~~~pi~~I~~~~~~~------~~~~~vD~~~~~g~~-------~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~- 216 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEY------GALLVVDAAQSAGCV-------PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPE- 216 (371)
T ss_dssp TTBBSSHHHHHHHHHHT------TSEEEEE-TTTTTTS-------S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHH-
T ss_pred ccEEeeeceehhhhhcc------CCceeEechhccccc-------cccccccccceeeecccc-cCCCCchhhheehhh-
Confidence 99999999999999999 999999999997665 356666689999999999 889999999999874
Q ss_pred Ccccccc-cccCccC------------CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 295 DLPDELV-FHINYLG------------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 295 ~~~~~~~-~~~~y~~------------~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.. +.+. ....+.. .....+ ..||.+....+++..+++.+...|++++ +..++++++.+.|.+.
T Consensus 217 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~ 294 (371)
T PF00266_consen 217 AI-ERLRPAKPGGGYLDFPSLQEYGLADDARRF-EGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEEL 294 (371)
T ss_dssp HH-HHHHTSSSSSSTTTHHHHHHHCHHSTTTGS-SSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hh-hccccccccccccccccchhcccccccccc-cccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcC
Confidence 11 1110 0111100 000111 1478888888999999999988899988 9999999999999998
Q ss_pred CCCc
Q 017569 360 SYFY 363 (369)
Q Consensus 360 g~~~ 363 (369)
+...
T Consensus 295 ~~~~ 298 (371)
T PF00266_consen 295 PGIE 298 (371)
T ss_dssp TTEE
T ss_pred Ccee
Confidence 7643
No 34
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=1.5e-24 Score=215.02 Aligned_cols=311 Identities=14% Similarity=0.094 Sum_probs=213.4
Q ss_pred cccccccccchhH--hhhCCCCCCCCCCCCHHHHHHHHHHhhhhcC----CCCccccccccCCChH-HHHHHHHH--Hhc
Q 017569 11 REILSSTFASRYV--RAAIPRFKMPDNSMPKEAAYQVINDELMLDG----NPRLNLASFVTTWMEP-ECDKLVMA--SIN 81 (369)
Q Consensus 11 ~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~----~p~~~l~~~~~~~~~~-~v~~~~~~--~~~ 81 (369)
-++|+++|+.+|- +... ..++|+.+ +..++++.+.+....+. ++ .+++.+.+....| .+.+.... .+.
T Consensus 21 ~~~~~~~~~~~p~~~~~~~-~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~-~~lg~g~~~~~~p~~~~~~~~~~~~~~ 97 (447)
T PRK00451 21 VKSIDELFADIPEELRLKR-PLDLPPGL-SEMELLRHLRELAAKNKTAEEYP-SFLGAGAYDHYIPAVVDHIISRSEFYT 97 (447)
T ss_pred CCCHHHHHHhCCHHHHhCC-CCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCc-ccCcccccCCcCcHHHHHHHhchhHHH
Confidence 3567788877774 2222 34789875 99999999988764332 33 2355555544333 34444322 221
Q ss_pred c-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec
Q 017569 82 K-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG 160 (369)
Q Consensus 82 ~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s 160 (369)
. ++..+..+++..+...+..+++++++|++.+ .+.+|+||++++..++.+++.. .+++|+++
T Consensus 98 ~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~-----~v~~~~g~t~~~~~~~~a~~~~------------~g~~Vlv~ 160 (447)
T PRK00451 98 AYTPYQPEISQGTLQAIFEYQTMICELTGMDVA-----NASMYDGATALAEAALMAVRIT------------KRKKVLVS 160 (447)
T ss_pred hcCCCCCccchHHHHHHHHHHHHHHHHhCCCcc-----eEEecCcHHHHHHHHHHHHHhc------------CCCEEEEe
Confidence 1 2323344667777777888999999999862 4889999998887766665321 14689999
Q ss_pred CCCcchHHHHHhh----hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccC
Q 017569 161 ANVQVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETG 236 (369)
Q Consensus 161 ~~~h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~ 236 (369)
++.|+++..+++. .|++++.+|++++ .+|+++|++++++++++|+++++ |+||.++|+++|+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~--~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~----- 232 (447)
T PRK00451 161 GAVHPEYREVLKTYLKGQGIEVVEVPYEDG--VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG----- 232 (447)
T ss_pred CccCHHHHHHHHHHHHhCCcEEEEecCCCC--CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC-----
Confidence 9999998887765 5899999998863 89999999999999999999998 8899999999999999999
Q ss_pred CCceEEe--ecccccccccccCCCccccccCCCCcEEEEcCccC----CCCCCCeEEEEEeCCCCccccccc--------
Q 017569 237 WDTPIHV--DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVF-------- 302 (369)
Q Consensus 237 ~~~~l~v--D~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~----l~~p~g~g~l~~~~~~~~~~~~~~-------- 302 (369)
++|+++ |.+..+ .. .+ ....++|.++.++||| .++++++|+++++++ ... .+..
T Consensus 233 -~~~~iv~~d~~~~g-~~---~~-----~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~-~~~-~~~~~~~g~~~~ 300 (447)
T PRK00451 233 -GALFIVGVDPVSLG-LL---KP-----PGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK-LVR-QMPGRLVGETVD 300 (447)
T ss_pred -CCEEEEEcChHHhc-cC---CC-----cccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH-HHh-hCCCCEeeeecc
Confidence 999998 654322 11 11 1234899999999998 345568999988653 221 1100
Q ss_pred ---ccCcc----------CCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 303 ---HINYL----------GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 303 ---~~~y~----------~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
...|. .... .....+++....+++.+.+++.++.+|++++ +..+++++++++|++.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~ 374 (447)
T PRK00451 301 ADGKRGFVLTLQAREQHIRREK-ATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGV 374 (447)
T ss_pred cCCCeeeEeecccccccccccc-ccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCE
Confidence 00010 0000 0011133333334666677888899999998 9999999999999988643
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=4.9e-24 Score=208.45 Aligned_cols=270 Identities=17% Similarity=0.090 Sum_probs=197.2
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCCC-----CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
|.....+++++.+.+++.+++.....++. ......+..+++++.+++++|++.. ..+++|+|+++++.+++
T Consensus 22 ld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~----~~v~~~~g~t~~l~~~~ 97 (403)
T TIGR01979 22 LDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD----EEIVFTRGTTESINLVA 97 (403)
T ss_pred EeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHH
Confidence 44444445567778888777654322211 1123344556888899999999831 24899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.... -..+++|+++++.|++ +...++..|++++.++++++ +.+|+++|+++++++|++|++++
T Consensus 98 ~~~~~~~---------~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~lv~~~~ 167 (403)
T TIGR01979 98 YSWGDSN---------LKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD-GTLDLDDLEKLLTEKTKLVAITH 167 (403)
T ss_pred HHhhhhc---------CCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC-CCCCHHHHHHHhccCCeEEEEEc
Confidence 7653210 0124689999998877 34566778999999999864 89999999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
++|+||.+.|+++|+++|+++ ++++|+|++|+.+..+ .++...++|+++.++||++ +|.|+|++++
T Consensus 168 ~~~~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~ 233 (403)
T TIGR01979 168 VSNVLGTVNPVEEIAKLAHQV------GAKVLVDGAQAVPHMP-------VDVQALDCDFYVFSGHKMY-GPTGIGVLYG 233 (403)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEchhhcCccc-------cCccccCCCEEEEeccccc-CCCCceEEEE
Confidence 999999999999999999999 9999999999865442 3344347999999999975 7999999998
Q ss_pred eCCCCccccccccc-Cc-----cCCCC-------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHH
Q 017569 291 RTKDDLPDELVFHI-NY-----LGSDQ-------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFF 355 (369)
Q Consensus 291 ~~~~~~~~~~~~~~-~y-----~~~~~-------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~ 355 (369)
+++ .. +.+.... .+ ..... ..+ ..||++....++++.+++.+...|++.+ ++.+++++++++
T Consensus 234 ~~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 310 (403)
T TIGR01979 234 KEE-LL-EQMPPFLGGGEMIAEVSFEETTYNEAPHKF-EAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALER 310 (403)
T ss_pred chH-HH-hcCCCeecCCCceeecccCccccCCChhhc-CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 753 22 1111000 00 00000 011 1367878778999999999877788877 999999999999
Q ss_pred HHhcC
Q 017569 356 VIHSS 360 (369)
Q Consensus 356 L~~~g 360 (369)
|++++
T Consensus 311 l~~~~ 315 (403)
T TIGR01979 311 LGEIP 315 (403)
T ss_pred HhcCC
Confidence 98874
No 36
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=8.2e-24 Score=205.50 Aligned_cols=261 Identities=15% Similarity=0.076 Sum_probs=187.5
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCC---C--cchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCCchHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDE---Y--PVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~---~--~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (369)
+++.++.+.+++.++++....++.. + .....++++ ++.+.+.+|+ ++ ..+++|+|+++++.+++.++.
T Consensus 8 ~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a-~~~~~~~~~~~~~-----~~i~~t~g~teal~~~~~~~~ 81 (382)
T TIGR03403 8 TTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEA-LDKLYKGINARDL-----DDIIITSCATESNNWVLKGVY 81 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHH-HHHHHHHcCcCCC-----CeEEEeCCHHHHHHHHHHHHH
Confidence 4455678899988887653333321 1 233455544 4445556776 33 348999999999999888763
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
.... ....+++|+++...|+++.... +..|++++.||++++ +.+|+++|++++++++++|++++++|+|
T Consensus 82 ~~~~-------~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~t 153 (382)
T TIGR03403 82 FDEI-------LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTITAEQVREAITEKTALVSVMWANNET 153 (382)
T ss_pred Hhhc-------ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCCCHHHHHHhcccCCeEEEEEcccCCC
Confidence 2100 0011357999999998876654 457999999999865 8999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
|.+.|+++|.++|+++ |+++|+|++++.+.. +.++...++|++++++||| ++|+|+|++++|+...
T Consensus 154 G~~~~~~~I~~la~~~------g~~~ivD~a~~~g~~-------~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~ 219 (382)
T TIGR03403 154 GMIFPIKEIGEICKER------GVLFHTDAVQAIGKI-------PVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVE 219 (382)
T ss_pred ccccCHHHHHHHHHHc------CCEEEEechhhcCCC-------ccCccccCCCEEEEcchhh-CCCCceEEEEECCCCC
Confidence 9999999999999999 999999999886544 2344445899999999998 5799999999987532
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+. +.+.++........||.+....+++..+++.+. ++++.. +..++++++.++|.+.+
T Consensus 220 ~~------p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~ 279 (382)
T TIGR03403 220 LT------PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELP 279 (382)
T ss_pred CC------CcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 21 111111111111237777776778888887663 345555 88999999999998764
No 37
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=3.4e-24 Score=208.51 Aligned_cols=257 Identities=13% Similarity=0.030 Sum_probs=184.0
Q ss_pred CChHHHHHHHHHHhccCCC----CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYV----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (369)
++++.+.+++.++...... .+..........+++++.+++++|++. ..+++|+++|+..++.++..+
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~-------~~~~~g~t~a~~~al~~l~~~-- 101 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE-------ARVTHGAREGKFAVMHSLCKK-- 101 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhcCC--
Confidence 4567788888877643111 111111222345567777999999975 678999999999988887432
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec--cCCccccCHHHHHHHHhh-------cCcEEEEeeCCC
Q 017569 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE-------NTICVAAILGST 213 (369)
Q Consensus 143 ~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~ 213 (369)
+++|+++.++|++...+++..|++++.+|+ ++ ++.+|+++|++++++ ++++|+++++++
T Consensus 102 -----------gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~ 169 (387)
T PRK09331 102 -----------GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVDG 169 (387)
T ss_pred -----------CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCC
Confidence 478999999999998889999999999998 44 488999999999974 588999999999
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
++|.+.|+++|+++|+++ ++++|+|+||+.+..| ++....++|.++.++|||+++|.|.|+++++++
T Consensus 170 ~tG~~~~l~~I~~la~~~------g~~livD~a~~~g~~~-------~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 170 NYGNLADAKKVAKVAHEY------GIPFLLNGAYTVGRMP-------VDGKKLGADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred CCcccccHHHHHHHHHHc------CCEEEEECCcccCCcC-------CCHHHcCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 999999999999999999 9999999999976553 222234789999999999999999999888642
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhc-CC
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHS-SY 361 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~-g~ 361 (369)
...........|..... . .+.++.+...++.+++++..+-.. ...+ +..++++++++.|+++ |+
T Consensus 237 -~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~l~g~ 302 (387)
T PRK09331 237 -YADKVFRTSRKFGVKEV-E-LLGCTLRGAPLVTLMASFPHVVER-VKRWDEEVKKARWFVDELEKIEGF 302 (387)
T ss_pred -HHhhcccccCCCcccce-e-eeceecCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCE
Confidence 22211111111211100 0 011222223456666666655322 3344 7889999999999998 54
No 38
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.2e-23 Score=204.32 Aligned_cols=261 Identities=15% Similarity=0.059 Sum_probs=192.6
Q ss_pred cCCChHHHHHHHHHHhccCCCCCC----CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
++++++.+.+++.+++.....++. .+....++.+++++.+++++|.++ ..+++++|+++++..++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEE-----QGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 445667788888877754322222 122345667789999999999875 24889999999999988887542
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHH---HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
+ ...+++|+++...|+++... ++..|++++.+|++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 84 ~---------~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (381)
T PRK02948 84 L---------PQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GLIRLVDLERAITPDTVLASIQHANSEIGT 153 (381)
T ss_pred c---------cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CCCCHHHHHHhcCCCCEEEEEECCcCCcEe
Confidence 1 01246899999899886654 4556999999999864 889999999999988999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.|+++|.++|+++ ++++|+|++++.+.. +.++...++|+++.++||++ +|.|.|+++++++....
T Consensus 154 ~~~~~~I~~l~~~~------~~~vivD~~~~~g~~-------~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~ 219 (381)
T PRK02948 154 IQPIAEIGALLKKY------NVLFHSDCVQTFGKL-------PIDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQVRWK 219 (381)
T ss_pred ehhHHHHHHHHHHc------CCEEEEEChhhcccc-------ccCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCCCCC
Confidence 99999999999999 999999988775433 23344447999999999975 79999999987542111
Q ss_pred cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. +.+.........+|.+....+++..+++.+. ++.++. +..++.++++++|+++|+
T Consensus 220 ~~------~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~ 278 (381)
T PRK02948 220 PV------FPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPL 278 (381)
T ss_pred Cc------ccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 10 0011111111236676776777778887653 345555 899999999999999875
No 39
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=6.3e-24 Score=209.08 Aligned_cols=270 Identities=16% Similarity=0.057 Sum_probs=196.7
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCC---CCC--cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDM---DEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~---~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
|....+++.++.+.+++.+++.....++ ..+ ....+..+++++.+++++|++.. ..+++|+|+|+++..++
T Consensus 36 Ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 36 LDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS----REIVFTRNATEAINLVA 111 (424)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEeCCHHHHHHHHH
Confidence 4444455566778888877764322221 111 22334456788999999999631 24899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.... -..+++|+++.+.|++ +...++..|++++.+|++++ +.+|+++++++++++|++|++++
T Consensus 112 ~~~~~~~---------~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~ 181 (424)
T PLN02855 112 YTWGLAN---------LKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSEKTKLVATHH 181 (424)
T ss_pred HHhhhhc---------CCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhccCceEEEEeC
Confidence 6542100 0114689999998876 45556778999999999765 57999999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
++|+||.+.|+++|+++|+++ ++++++|++|+.+.. ++++...++|.++.++||+ ++|.|+|++++
T Consensus 182 ~~n~tG~~~~~~~I~~l~~~~------g~~vivD~a~~~g~~-------~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~ 247 (424)
T PLN02855 182 VSNVLGSILPVEDIVHWAHAV------GAKVLVDACQSVPHM-------PVDVQTLGADFLVASSHKM-CGPTGIGFLWG 247 (424)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCc-------CCCchhcCCCEEEeecccc-cCCCccEEEEE
Confidence 999999999999999999999 999999999975443 2344444789999999995 57999999998
Q ss_pred eCCCCccccccccc--------CccCC-----CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHH
Q 017569 291 RTKDDLPDELVFHI--------NYLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFF 355 (369)
Q Consensus 291 ~~~~~~~~~~~~~~--------~y~~~-----~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~ 355 (369)
+++ .+. .+.... .|... ....+ ..||++....++++.+++.+...|++++ ++.++++++++.
T Consensus 248 ~~~-~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~r~-e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 324 (424)
T PLN02855 248 KSD-LLE-SMPPFLGGGEMISDVFLDHSTYAPPPSRF-EAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEK 324 (424)
T ss_pred chh-hhh-cCCCEecCCCceeeeecCccccCCChhhc-cCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 754 221 111000 00000 00111 2478888889999999999988899888 899999999999
Q ss_pred HHhcC
Q 017569 356 VIHSS 360 (369)
Q Consensus 356 L~~~g 360 (369)
|++++
T Consensus 325 L~~~~ 329 (424)
T PLN02855 325 LSSVP 329 (424)
T ss_pred HhcCC
Confidence 98763
No 40
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=6.3e-24 Score=207.23 Aligned_cols=269 Identities=13% Similarity=0.058 Sum_probs=194.7
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCC----CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
|....++++++.+.+++.+++...... |....+..++.+++++.+++++|++++ ..++++|+++++..++.
T Consensus 21 l~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-----~v~~~~~~t~~l~~~~~ 95 (397)
T TIGR01976 21 FDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-----EVVFGANATSLTFLLSR 95 (397)
T ss_pred ecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-----eEEEeCCHHHHHHHHHH
Confidence 444445566677888888777543221 212234556778899999999999752 38899999999877776
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++...+ ..+++|+++++.|++.. ..++..|++++.++++++++.+|+++|++++++++++|+++++
T Consensus 96 ~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 96 AISRRW----------GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHhcC----------CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCC
Confidence 653211 12468999999997743 5567789999999998644899999999999999999999999
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
+|++|.+.|+++|+++|+++ ++++++|+++..+.. ..++...++|.++.++|||+ +| +.|+++++
T Consensus 166 ~n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~-------~~~~~~~~~d~~~~s~~K~~-g~-~~G~l~~~ 230 (397)
T TIGR01976 166 SNTLGSIVDLAAITELVHAA------GALVVVDAVHYAPHG-------LIDVQATGADFLTCSAYKFF-GP-HMGILWGR 230 (397)
T ss_pred CCCCCccCCHHHHHHHHHHc------CCEEEEehhhhcccc-------CCCHHHcCCCEEEEechhhc-CC-ceEEEEEc
Confidence 99999999999999999999 999999999864332 23333347899999999997 44 48998886
Q ss_pred CCCCcccccc-cccCccCCC-CCCccccCCcchhHHHHHHHHHHHhcHhh--------------HHHH--HhhHHHHHHH
Q 017569 292 TKDDLPDELV-FHINYLGSD-QPTFTLNFSKGSSQIIAQYYQFIRLGFEV--------------IPSF--CCVDHKKLSS 353 (369)
Q Consensus 292 ~~~~~~~~~~-~~~~y~~~~-~~~~~l~~tr~~~~~l~~~~~l~~lg~~G--------------~~~~--~~~~~a~~l~ 353 (369)
++ .+. .+. ....|.... ...+ ..||++...++++..+++.+...| ++++ +..+++++++
T Consensus 231 ~~-~~~-~l~~~~~~~~~~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 307 (397)
T TIGR01976 231 PE-LLM-NLPPYKLTFSYDTGPERF-ELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLL 307 (397)
T ss_pred HH-HHh-hCCCccccCccCCCcchh-cCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 53 221 111 111121111 1111 247888888888989998885554 4555 7888999999
Q ss_pred HHHHhcCC
Q 017569 354 FFVIHSSY 361 (369)
Q Consensus 354 ~~L~~~g~ 361 (369)
+.|++++.
T Consensus 308 ~~L~~~~~ 315 (397)
T TIGR01976 308 VGLSDLPG 315 (397)
T ss_pred HHHhcCCC
Confidence 99998773
No 41
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.4e-24 Score=206.95 Aligned_cols=272 Identities=15% Similarity=0.107 Sum_probs=202.6
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+.+.|..+ ++.+.+++.++++.....|....|..+|++++.+++.+.+|.+.+. ...+++|+|+++|++.++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~--~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP--EEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCCHHHHHHHHH
Confidence 4578888888755 4668888888887653244577899999999999999999976532 234999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC--CccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
.++.++ +++|++++|.|++|.....+.|+.+..+|++. ++|.+|+++|+++++++|++|++++|+
T Consensus 107 ~a~~~p-------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~ 173 (393)
T COG0436 107 LALLNP-------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPN 173 (393)
T ss_pred HHhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCC
Confidence 998774 57899999999999999999999999999853 369999999999999999999999999
Q ss_pred CCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCC--CcEEEEc-CccC-CCCCCCe
Q 017569 213 TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL--VKSINVS-GHKY-GLVYAGV 285 (369)
Q Consensus 213 ~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~--~Dsi~~~-~hK~-l~~p~g~ 285 (369)
||||++ +.+++|+++|+++ ++|+++|++|..+... ...+........ -..++++ ..|. .+++|++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~------~i~ii~DEiY~~l~yd--~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREH------DIIIISDEIYEELVYD--GAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHc------CeEEEEehhhhhcccC--CCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 999998 4589999999999 9999999999987652 101111222222 2355554 4454 5678999
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh----hHHHH--HhhHHHHHHHHHHHhc
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE----VIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~----G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|+++..+++.. ..+..-..+ +-.+...+.+.++...|... .+..+ ...+..+.+.+.|.+.
T Consensus 246 G~~v~~~~~l~-~~~~~~~~~------------~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 312 (393)
T COG0436 246 GWVVGPPEELI-AALRKLKSY------------LTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI 312 (393)
T ss_pred eEeecChHHHH-HHHHHHHHh------------cccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998643332 221100111 11123456677777777432 33333 5888889999999988
Q ss_pred CCCc
Q 017569 360 SYFY 363 (369)
Q Consensus 360 g~~~ 363 (369)
+.++
T Consensus 313 ~g~~ 316 (393)
T COG0436 313 GGLS 316 (393)
T ss_pred CCee
Confidence 7443
No 42
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.14 Aligned_cols=262 Identities=17% Similarity=0.093 Sum_probs=188.2
Q ss_pred cCCChHHHHHHHHHHhc--cCCCCCCCC--c---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASIN--KNYVDMDEY--P---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~--~n~~~~~~~--~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
+++.++.+.+++.+++. ....++... . ...+..+++++++++++|++++ .+++++|||+|+.+++.++
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-----~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 12 TTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-----EIVFTSGATESDNLAIKGA 86 (404)
T ss_pred CCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-----eEEEeCCHHHHHHHHHHHH
Confidence 44566778888888775 333222210 0 1124455778889999999762 3899999999999998876
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh---hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
...+. ..+++|++++.+|+++...++. .|++++.++++++ +.+|+++|+++|++++++|++++++|+
T Consensus 87 ~~~~~---------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~ 156 (404)
T PRK14012 87 AHFYQ---------KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN-GIIDLEKLEAAMRDDTILVSIMHVNNE 156 (404)
T ss_pred HHhhc---------CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECcCCC
Confidence 53210 1246899999999887665544 4999999998864 899999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
||.+.|+++|.++|+++ ++++|+|+|++.+..+ +++...++|++++++||++ +|.|+|++++++..
T Consensus 157 tG~~~~~~~I~~la~~~------g~~vivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~ 222 (404)
T PRK14012 157 IGVIQDIAAIGEICRER------GIIFHVDAAQSVGKVP-------IDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKP 222 (404)
T ss_pred ccchhhHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCcccCCCCEEEEehhhcc-CCCceEEEEEecCC
Confidence 99999999999999999 9999999999875542 2333347999999999955 78899999998653
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. . ..+.+.++........||.+....+++..++..+. .++.++ +..++++++.+.|++.+
T Consensus 223 ~~-~---~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~ 285 (404)
T PRK14012 223 RV-R---LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIE 285 (404)
T ss_pred CC-C---CCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 32 1 11112222211101125555555566666666553 344444 88999999999998754
No 43
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=2.9e-24 Score=209.85 Aligned_cols=257 Identities=11% Similarity=-0.027 Sum_probs=194.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..++.+.+++.... .++ .++...++.+++++++++++|++.+ ...+++++|++++..++....++
T Consensus 19 ~~~~~V~~a~~~~~----~~~-~~~~~~~~~~~~~~~l~~~~g~~~~----~~vi~~~~gt~a~~~a~~~~~~~------ 83 (401)
T PLN02409 19 NIPERVLRAMNRPN----EDH-RSPAFPALTKELLEDVKYIFKTKSG----TPFIFPTTGTGAWESALTNTLSP------ 83 (401)
T ss_pred CCCHHHHHHhcCCC----CCC-CCHHHHHHHHHHHHHHHHHhCCCCC----CEEEEeCCcHHHHHHHHHhcCCC------
Confidence 33466666654433 111 3567788999999999999999752 24788889999988777665331
Q ss_pred hcCCCCCCCeEEecCCCcchH--HHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCcccCCC
Q 017569 147 EQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (369)
+++|+++++.|++. ...++.+|++++.++.+.+ ..+|+++|++++++ ++++|++++++|+||.+.|
T Consensus 84 -------Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 84 -------GDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -------CCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 46899999888765 4677888999999998764 45899999999986 7899999999999999999
Q ss_pred HHHHHHH--HHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccc
Q 017569 221 VKLLHDL--LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 221 l~~I~~l--~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~ 298 (369)
+++|+++ |+++ ++++++|++++.+.. ++++...++|.++.++|||+++|.|+|+++++++ .+.
T Consensus 156 ~~~i~~l~~~~~~------g~~~vvD~v~s~g~~-------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~- 220 (401)
T PLN02409 156 LAGVRKLLDCAQH------PALLLVDGVSSIGAL-------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPK-ALE- 220 (401)
T ss_pred HHHHHHHHhhhcc------CcEEEEEcccccCCc-------cccccccCccEEEEcCccccCcCCCcceeEECHH-HHH-
Confidence 9999999 9999 999999999886544 2444445899999999999999999999998754 221
Q ss_pred cccc---ccCccC------CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 299 ELVF---HINYLG------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 299 ~~~~---~~~y~~------~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+.. ...|.. .........+|.+....+++..+++.+..+|++.+ ++.++++++++.|+++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~ 294 (401)
T PLN02409 221 ASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL 294 (401)
T ss_pred HHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1110 111111 00000011356777778888899999888899988 999999999999998873
No 44
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=2.7e-24 Score=206.80 Aligned_cols=257 Identities=14% Similarity=0.071 Sum_probs=190.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
+.++.+.+++.+.+. . ..++...++.+++++++++++|++.. ...+++.||++|+..++.++..+
T Consensus 9 ~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~----~~~~~~~~~t~al~~~~~~~~~~------ 73 (356)
T cd06451 9 NVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENG----LTFLLSGSGTGAMEAALSNLLEP------ 73 (356)
T ss_pred CCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCC----CEEEEecCcHHHHHHHHHHhCCC------
Confidence 334666666643321 1 13556777788999999999999542 23678888999998888876431
Q ss_pred hcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
+++|+++.+.|++ +...++..|++++.+|++++ +.+|++++++++++ ++++|++++++|++|.+.|+++
T Consensus 74 -------g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 74 -------GDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG-EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred -------CCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC-CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHH
Confidence 4689888888876 56777889999999999864 79999999999987 8999999999999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~- 302 (369)
|.++|+++ ++++++|++++.+..+ .++...++|.++.++|||+++|.|+|+++.+++ .. ..+..
T Consensus 146 i~~~a~~~------~~~li~D~~~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~-~~~~~~ 210 (356)
T cd06451 146 IGALAKKH------DALLIVDAVSSLGGEP-------FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-AL-ERIKKK 210 (356)
T ss_pred HHHHHHhc------CCEEEEeeehhccCcc-------ccccccCccEEEecCchhccCCCCcceeEECHH-HH-HHHHhc
Confidence 99999999 9999999998754332 222223689999999999999999999998753 22 22211
Q ss_pred --ccCccCC-------CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 303 --HINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 --~~~y~~~-------~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
...|... ....+...++.+....+++.++++.+..+|++++ ++.++++++++.|++.|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 280 (356)
T cd06451 211 TKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL 280 (356)
T ss_pred CCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1111100 0001112244445456777888888888888877 899999999999998763
No 45
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=2.3e-23 Score=203.28 Aligned_cols=288 Identities=15% Similarity=0.057 Sum_probs=196.2
Q ss_pred HHHHHHHHhhhhc---CCCCccccccccCCChHH-HHHHHHHHhccCCCCCCC-----CcchHHHHHHHHHHHHHHhCCC
Q 017569 41 AAYQVINDELMLD---GNPRLNLASFVTTWMEPE-CDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTP 111 (369)
Q Consensus 41 ~i~~~l~~~~~~~---~~p~~~l~~~~~~~~~~~-v~~~~~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~ 111 (369)
+|++++..+-..+ .++..+++.+.+++.+|. +.++..++ . ....|.. +.+..++.+++++++++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 6777776643322 223356677777766554 44545444 2 2122222 5678899999999999999997
Q ss_pred CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhc----ceeEEEeccCCc
Q 017569 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE----VELKEVKLEEGY 187 (369)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G----~~v~~v~~~~~~ 187 (369)
.+ ...++++|+.+...++..++.. +..+++|+++++.|.++..++..+| ++++.+|++++
T Consensus 81 ~~-----~v~~~~~g~~~~~~~~~~~~~~----------~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~- 144 (398)
T cd00613 81 VA-----NASLQDEATAAAEAAGLAAIRA----------YHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG- 144 (398)
T ss_pred cc-----ceeccCchHHHHHHHHHHHHhc----------ccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-
Confidence 52 2556665554444444444321 1124689999999999988888887 89999998754
Q ss_pred cccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCH-HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCC
Q 017569 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDV-KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (369)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l-~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (369)
+.+|+++|++++++++++|+++.++ ++|.+.|+ ++|+++|+++ ++|+|+|++++.+..+ . .....
T Consensus 145 ~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~------g~~livD~~~~~~~~~-~------~~~~~ 210 (398)
T cd00613 145 GTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSA------GALVYVDGDNLNLTGL-K------PPGEY 210 (398)
T ss_pred CCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhc------CCEEEEEeccccccCC-C------ChHHc
Confidence 7899999999999999999999986 78999885 9999999999 9999999988653321 1 11123
Q ss_pred CCcEEEEcCccCCCCC-----CCeEEEEEeCCCCcccccccc-cCccCC---C-------C-------C-Ccc-ccCCcc
Q 017569 267 LVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH-INYLGS---D-------Q-------P-TFT-LNFSKG 321 (369)
Q Consensus 267 ~~Dsi~~~~hK~l~~p-----~g~g~l~~~~~~~~~~~~~~~-~~y~~~---~-------~-------~-~~~-l~~tr~ 321 (369)
++|+++.++|||+ +| ++.|++++++. .. ..+... ..+... . . . ..+ ...+..
T Consensus 211 ~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~ 287 (398)
T cd00613 211 GADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQ 287 (398)
T ss_pred CCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecH
Confidence 6899999999998 55 67788887643 22 121110 000000 0 0 0 000 002233
Q ss_pred hhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
......+|.++..++.+|++++ ++.+++++++++|+++++..
T Consensus 288 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 331 (398)
T cd00613 288 ALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL 331 (398)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 3456777888888999999887 89999999999999987653
No 46
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=6e-23 Score=215.38 Aligned_cols=289 Identities=10% Similarity=-0.015 Sum_probs=209.9
Q ss_pred CCHHHHHHHHHHhhhhc---CCCCccccccccCCChHHHHHHHH---HHhccCCCCCC-CCcchHHHHHHHHHHHHHHhC
Q 017569 37 MPKEAAYQVINDELMLD---GNPRLNLASFVTTWMEPECDKLVM---ASINKNYVDMD-EYPVTTELQNRCVNMIAHLFN 109 (369)
Q Consensus 37 ~~~~~i~~~l~~~~~~~---~~p~~~l~~~~~~~~~~~v~~~~~---~~~~~n~~~~~-~~~~~~~le~~~~~~la~l~g 109 (369)
.++.++++.+..+-..+ .+..+.|++ |+.-..+.+-+... .+.+-+++.+. ..+|..++..++++++++++|
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~~~plgs-ctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g 582 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHSMIPLGS-CTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITG 582 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccCCccCcc-cccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 67789999988876543 233344443 22211232222222 22333444443 235888899999999999999
Q ss_pred CCCCCCCCCCeEEeCCch----HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC
Q 017569 110 TPVADDKTAVGVGTVGSS----EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE 185 (369)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt----~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~ 185 (369)
++. +.++++++ +|++++++++... .|. .++.+||+|...|.+....+.+.|++++.||+++
T Consensus 583 ~~~-------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd-~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~ 647 (993)
T PLN02414 583 FDS-------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGD-HHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDA 647 (993)
T ss_pred CCe-------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCC-CCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCC
Confidence 964 88888888 8998988887542 132 1345899999999999999999999999999986
Q ss_pred CccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc
Q 017569 186 GYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (369)
Q Consensus 186 ~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (369)
+ +.+|+++|++++++ ++++|++++|||.+|..+|+++|+++|+++ |+.+++|+|+..+......|
T Consensus 648 ~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~------Galv~vDgAq~~a~~~l~~p----- 715 (993)
T PLN02414 648 K-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN------GGQVYMDGANMNAQVGLTSP----- 715 (993)
T ss_pred C-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc------CCEEEEEecCHHhccCcCCc-----
Confidence 4 89999999999995 679999999999999999999999999999 99999999986544321111
Q ss_pred ccCCCCcEEEEcCccCCCCCC-----CeEEEEEeCCCCcccccccc-----cCccCCCCCCccccCCcch------hHHH
Q 017569 263 FRLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVFH-----INYLGSDQPTFTLNFSKGS------SQII 326 (369)
Q Consensus 263 ~~~~~~Dsi~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~-----~~y~~~~~~~~~l~~tr~~------~~~l 326 (369)
...++|+++++.|||+++|. |+|++++++. +. ..+... ..+.... .....||++. ..++
T Consensus 716 -~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~-p~lPg~~v~~~~~~~~r~--~~s~iGt~~~a~~g~al~l~ 790 (993)
T PLN02414 716 -GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFLPSHPVVPTGGIPRPE--KTQPLGTISAAPWGSALILP 790 (993)
T ss_pred -cccCCCEEEecCCccCCcCcccCCCCeeeEEEchh-hc-ccCCCCccccCCCccccc--CCCCcCCccchhhhhHHHHH
Confidence 23489999999999887665 5999998753 22 222111 0111100 1112366443 4567
Q ss_pred HHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 327 AQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 327 ~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
..|..++.+|.+|+++. +++.+|+|++++|.+
T Consensus 791 ~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~ 824 (993)
T PLN02414 791 ISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG 824 (993)
T ss_pred HHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999988 899999999999976
No 47
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=6.8e-23 Score=197.56 Aligned_cols=255 Identities=14% Similarity=0.059 Sum_probs=179.5
Q ss_pred CChHHHHHHHHHHhccCCCCCC-----CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
+..+.+.+.+.++... ...+. .........+++++.+++++|++. .++|+|+++++..++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-------i~~~~g~t~al~~~l~~~~~~- 82 (361)
T cd06452 12 RLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDE-------ARVTPGAREGKFAVMHSLCEK- 82 (361)
T ss_pred CCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCCce-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 4457788888877632 12211 111111223355566999999853 889999999999888876432
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhh-------cCcEEEEeeCCC
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-------NTICVAAILGST 213 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~-------~~~~v~~~~~~~ 213 (369)
+++|+++.++|++...+++..|++++.+|++.+ ++.+|+++|++++++ ++++|++++++|
T Consensus 83 ------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 ------------GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred ------------CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 468999999999988889999999999999764 369999999999873 688999999999
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
++|.+.|+++|.++|+++ ++++|+|+||+.+..+ +.....++|.++.++||++++|.++|+++++++
T Consensus 151 ~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~ 217 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEY------GVPLLLNGAYTVGRMP-------VSGKELGADFIVGSGHKSMAASAPIGVLATTEE 217 (361)
T ss_pred CCeeeccHHHHHHHHHHc------CCeEEEECCcccCCcC-------CCHHHcCCCEEEecCCccccCCCCeEEEEECHH
Confidence 999999999999999999 9999999999865432 122223689999999999988889999887642
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhc
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~ 359 (369)
.. ..+.....+....... .+.++.....++.+++++..+ .+.++.+ +..++++++++.|+++
T Consensus 218 -~~-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~l 280 (361)
T cd06452 218 -WA-DIVFRTSQMFKIKEVE-LLGCTLRGAPLVTLMASFPHV-KERVKRWDEEVEKARWFVAELEKI 280 (361)
T ss_pred -HH-HHHhccccccccceee-eeccccCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22 2221111111110000 011233233355666666654 2335555 7788899999999998
No 48
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.91 E-value=7.3e-23 Score=200.41 Aligned_cols=262 Identities=10% Similarity=-0.026 Sum_probs=181.8
Q ss_pred cCCChHHHHHHHHHHhcc---CC-CCCCC-CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINK---NY-VDMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~---n~-~~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
.++.++.+.+++.++++. +. ..+.. ......+.++..+ + +++|++++ ..++|+|+|+++..++.++..
T Consensus 36 ~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-----~v~~~~~~t~~l~~~~~~~~~ 108 (406)
T TIGR01814 36 LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-----EVVVMNTLTINLHLLLASFYK 108 (406)
T ss_pred cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-----cEEEeCCchHHHHHHHHHhcC
Confidence 334566677777766543 11 11111 1122334444433 4 89999763 489999999999888877622
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHhhhccee----EEEeccCCccccCHHHHHHHHh---hcCcEEEE
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYFEVEL----KEVKLEEGYYVMNPVKAVELVD---ENTICVAA 208 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~~~~G~~v----~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~ 208 (369)
+ | ..+.+|+++...|++... .++..|+++ +.++.+. ++.+|++++++.++ ++|++|++
T Consensus 109 ~--------~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~ 177 (406)
T TIGR01814 109 P--------T--PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE-EETLRLEDILDTIEKNGDDIAVILL 177 (406)
T ss_pred C--------c--CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC-CCccCHHHHHHHHHhcCCCeEEEEE
Confidence 1 1 112478888899988443 445668887 4565554 37889999999884 67899999
Q ss_pred eeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEE
Q 017569 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (369)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l 288 (369)
++.++.+|.+.|+++|+++|+++ |++++||++++.+..| +++...++|.+++++|||+++|+| |.+
T Consensus 178 ~~v~~~tG~~~~~~~i~~~~~~~------g~~~~vD~aq~~G~~~-------id~~~~gvD~~~~s~hK~l~g~pG-~~l 243 (406)
T TIGR01814 178 SGVQYYTGQLFDMAAITRAAHAK------GALVGFDLAHAVGNVP-------LDLHDWGVDFACWCTYKYLNAGPG-AGA 243 (406)
T ss_pred eccccccceecCHHHHHHHHHHc------CCEEEEEcccccCCcc-------cccccCCCCEEEEcCccccCCCCC-eEE
Confidence 99999999999999999999999 9999999999987663 455445899999999999988888 656
Q ss_pred EEeCCCCcccccccccCccCCCC-------------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHH
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQ-------------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSS 353 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~-------------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~ 353 (369)
+++.+... ........|.+... ..-...||.+....+++..+++.+...|+.++ ++.+++++++
T Consensus 244 ~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 322 (406)
T TIGR01814 244 FVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLE 322 (406)
T ss_pred EEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 65543221 11001112211100 00001377887778888899999988888888 9999999999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|++.
T Consensus 323 ~~l~~~ 328 (406)
T TIGR01814 323 ELIKAR 328 (406)
T ss_pred HHHHhh
Confidence 999874
No 49
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=1.2e-22 Score=196.05 Aligned_cols=255 Identities=13% Similarity=0.018 Sum_probs=182.4
Q ss_pred HHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 017569 74 KLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (369)
Q Consensus 74 ~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 153 (369)
+.+.+++...+.++ .+...++.+++++.+++++|++++. ...++|+|||+++..++.++..+ |
T Consensus 16 ~~v~~~~~~~~~~~--~~~~~~~~~~~r~~la~l~~~~~~~---~~i~~t~~~t~al~~~~~~l~~~--------~---- 78 (363)
T TIGR02326 16 RTVKEAMLFDWCTW--DSDYNIVVEQIRQQLLALATAEEGY---TSVLLQGSGTFAVEAVIGSAVPK--------D---- 78 (363)
T ss_pred HHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCCHHHHHHHHHhcCCC--------C----
Confidence 33444443333333 2355666778999999999997521 24789999999999888776431 1
Q ss_pred CCeEEecCCCcch-HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc--CcEEEEeeCCCCcccCCCHHHHHHHHHH
Q 017569 154 KPNIVTGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 154 ~~~Vi~s~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~~~~~~~~tG~~~~l~~I~~l~~~ 230 (369)
+..|+++...|.. +...++..|++++.+|++++ +.+|+++++++++++ +++|.+++++|+||.+.|+++|+++|++
T Consensus 79 ~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~ 157 (363)
T TIGR02326 79 GKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHR 157 (363)
T ss_pred CeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHH
Confidence 2345555555555 35777889999999999864 789999999999864 4678889999999999999999999999
Q ss_pred hhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-ccC-ccC
Q 017569 231 KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HIN-YLG 308 (369)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~-y~~ 308 (369)
+ ++++++|++++.+.. ++++...++|.++.++|||+++|+|.|+++++++. +. .+.. ... +..
T Consensus 158 ~------g~~livD~~~~~g~~-------~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~-~~~~~~~~~~~~ 222 (363)
T TIGR02326 158 H------GKVTIVDAMSSFGGI-------PIDIAELHIDYLISSANKCIQGVPGFGFVIARQAE-LA-ACKGNARSLSLD 222 (363)
T ss_pred c------CCEEEEEccccccCc-------ccchhhcCccEEEecCccccccCCcceEEEECHHH-HH-HhhcCCCceeec
Confidence 9 999999998875443 23444447999999999999999999999997642 11 1110 000 000
Q ss_pred -------CCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 309 -------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 309 -------~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.........+|.+....+++..+++.+..+ |++++ ++.+++.++++.|+++|+
T Consensus 223 ~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~ 285 (363)
T TIGR02326 223 LYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGF 285 (363)
T ss_pred HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 000000122456666778888889888666 47766 999999999999998874
No 50
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=4.9e-23 Score=193.03 Aligned_cols=226 Identities=13% Similarity=-0.011 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcc
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~ 176 (369)
.+++++.+++++|.+. ..++++|+++++..++.++..+ +++|+++.+.|.++..++...|+
T Consensus 61 i~~~~~~~A~~~ga~~------~~~~~~Gst~a~~~~l~al~~~-------------gd~Vlv~~~~h~s~~~~~~~~g~ 121 (294)
T cd00615 61 IKEAQELAARAFGAKH------TFFLVNGTSSSNKAVILAVCGP-------------GDKILIDRNCHKSVINGLVLSGA 121 (294)
T ss_pred HHHHHHHHHHHhCCCC------EEEEcCcHHHHHHHHHHHcCCC-------------CCEEEEeCCchHHHHHHHHHCCC
Confidence 3455666999999874 2445899999998888876442 57999999999999999999999
Q ss_pred eeEEEeccCCc-----cccCHHHHHHHHhh--cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 177 ELKEVKLEEGY-----YVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 177 ~v~~v~~~~~~-----~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.+++++++.+. +.+|++++++++++ ++++|++++| |++|.+.|+++|+++|+++ +++++||+||+.
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~------g~~livDeA~~~ 194 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR------GLPVLVDEAHGA 194 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc------CCeEEEECcchh
Confidence 99999875422 37999999999974 5788999988 6899999999999999999 999999999986
Q ss_pred ccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
... +.+..+......++|.++.|+||++.++.++|++.+++.......+........ .+|.+.....++-
T Consensus 195 ~~~--~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~--------ttsps~~~~asl~ 264 (294)
T cd00615 195 HFR--FHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQ--------STSPSYLILASLD 264 (294)
T ss_pred hhc--cCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHC--------CCCcHHHHHHHHH
Confidence 432 222222233344899999999999988888888887654221111111111111 1355555567777
Q ss_pred HHHHHhcHhhHHHH-HhhHHHHHHHHHHHh
Q 017569 330 YQFIRLGFEVIPSF-CCVDHKKLSSFFVIH 358 (369)
Q Consensus 330 ~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~ 358 (369)
.+++.+..+|.+.+ ++.+++++++++|++
T Consensus 265 ~a~~~~~~~g~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 265 VARAMMALEGKELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 88888877787766 999999999999864
No 51
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.89 E-value=9.7e-22 Score=183.32 Aligned_cols=229 Identities=15% Similarity=0.122 Sum_probs=177.4
Q ss_pred HHHHHHHHhhhhcCCCCccccccccCCChH-HHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 017569 41 AAYQVINDELMLDGNPRLNLASFVTTWMEP-ECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (369)
Q Consensus 41 ~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~-~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (369)
.++.++..+......+.. |+.+.|+.++| .+.+++..+.... ..+|...-|..+|.+.+++.+++++|...+. ..
T Consensus 18 ~vw~e~~~la~e~~~~~~-LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~--~~ 94 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVPNP-LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP--DD 94 (420)
T ss_pred cHHHHHHHHHHhcCCCCc-ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC--cc
Confidence 455555554433323321 78888887655 4788888887664 4566666789999999999999999887532 34
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-------CCccccC
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-------EGYYVMN 191 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-------~~~~~~d 191 (369)
.+.+|.|+.+|+..++.++.+. +++|++.+|.+.+|....++.|..++.|+.. .++|.+|
T Consensus 95 eVlVT~GA~~ai~~~~~~l~~~-------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D 161 (420)
T KOG0257|consen 95 EVLVTAGANEAISSALLGLLNP-------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLD 161 (420)
T ss_pred cEEEecCchHHHHHHHHHHcCC-------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCC
Confidence 5999999999999999998874 6899999999999999999999999999987 4569999
Q ss_pred HHHHHHHHhhcCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCC
Q 017569 192 PVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPL 267 (369)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~ 267 (369)
.++|+.+++++|++|++++|+||||.+ ..+++|+++|+++ |+++++|++|..++.. +.....+. +++
T Consensus 162 ~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~------~~lvisDevYe~~v~d---~~~h~r~aslPg 232 (420)
T KOG0257|consen 162 PEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH------GLLVISDEVYEWLVYD---GNKHIRIASLPG 232 (420)
T ss_pred hHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEEhhHhHHHhhC---CCcceeeecCCc
Confidence 999999999999999999999999998 4599999999999 9999999999987652 21011111 222
Q ss_pred C--cEEEEc-CccC-CCCCCCeEEEEEeCCCC
Q 017569 268 V--KSINVS-GHKY-GLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 268 ~--Dsi~~~-~hK~-l~~p~g~g~l~~~~~~~ 295 (369)
. -.++++ ..|. ++++|..||++. ++.+
T Consensus 233 m~ertitvgS~gKtf~~TGWrlGW~ig-p~~L 263 (420)
T KOG0257|consen 233 MYERTITVGSFGKTFGVTGWRLGWAIG-PKHL 263 (420)
T ss_pred hhheEEEeccccceeeeeeeeeeeeec-hHHh
Confidence 1 233333 5665 566899999987 4433
No 52
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=9.9e-22 Score=186.00 Aligned_cols=241 Identities=13% Similarity=0.031 Sum_probs=192.8
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--
Q 017569 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-- 166 (369)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s-- 166 (369)
.++....+.+++++.+..+++.+.. ....++.+||.++-.++..+..+ +++|++.....+.
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~----~~~ll~gsGt~amEAav~sl~~p-------------gdkVLv~~nG~FG~R 94 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENG----DVVLLSGSGTLAMEAAVASLVEP-------------GDKVLVVVNGKFGER 94 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCC----cEEEEcCCcHHHHHHHHHhccCC-------------CCeEEEEeCChHHHH
Confidence 4677888899999999999999831 34677788899998888877653 4677777666554
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc--CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
+...++.+|++++.+.++.. -.+|+++++++++++ .+.|.+++..|+||...|+++|+++|+++ +..++||
T Consensus 95 ~~~ia~~~g~~v~~~~~~wg-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~------g~l~iVD 167 (383)
T COG0075 95 FAEIAERYGAEVVVLEVEWG-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH------GALLIVD 167 (383)
T ss_pred HHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc------CCEEEEE
Confidence 78899999999999998864 689999999999954 57899999999999999999999999999 9999999
Q ss_pred cccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc-cC-cc------CCCCCCccc
Q 017569 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-IN-YL------GSDQPTFTL 316 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~-y~------~~~~~~~~l 316 (369)
++.+.+.. +++++..++|.+..++||++++|+|.|++.++++.+-. ..... +. |+ ..-......
T Consensus 168 aVsS~Gg~-------~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~-~~~~~~~~~ylDL~~~~~~~~~~~~~ 239 (383)
T COG0075 168 AVSSLGGE-------PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEA-IEERKHPSFYLDLKKWLKYMEKKGST 239 (383)
T ss_pred ecccCCCc-------ccchhhcCccEEEecCchhccCCCccceeEECHHHHHH-HhcCCCCceeecHHHHHHHHhhcCCC
Confidence 98775544 24445558999999999999999999999998753321 10011 11 11 110111234
Q ss_pred cCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 317 NFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 317 ~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
..|.+....+++..+|+.+-.||++.+ |+..+++++++.++++|+
T Consensus 240 p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl 286 (383)
T COG0075 240 PYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGL 286 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 578888889999999999999999999 999999999999999986
No 53
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=1.8e-21 Score=188.06 Aligned_cols=238 Identities=13% Similarity=0.045 Sum_probs=175.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH--HH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW--EK 169 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~--~~ 169 (369)
...+..+++++.+++++|.+++. ....++.+|++++..++.++..+ ++.|+++.+.++.. ..
T Consensus 34 ~~~~~~~~~~~~l~~l~~~~~~~---~~i~~~~~gt~~l~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~~ 97 (368)
T PRK13479 34 DFNALTASVRAKLVAIATGEEGY---TCVPLQGSGTFSVEAAIGSLVPR-------------DGKVLVPDNGAYGARIAQ 97 (368)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCcHHHHHHHHHhccCC-------------CCeEEEEeCCchHHHHHH
Confidence 34456778999999999986421 23678899999999988887432 35677766666554 47
Q ss_pred HHhhhcceeEEEeccCCccccCHHHHHHHHhhc--CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
.++..|++++.||++.+ +.+|+++++++++++ ++.|.+++++|+||.+.|+++|.++|+++ ++++++|+++
T Consensus 98 ~~~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~------~~~livDa~~ 170 (368)
T PRK13479 98 IAEYLGIAHVVLDTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRH------GKRLIVDAMS 170 (368)
T ss_pred HHHHcCCcEEEEECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHc------CCEEEEEccc
Confidence 77889999999999764 789999999999754 56788999999999999999999999999 9999999877
Q ss_pred ccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-ccCccCC-------CCCCccccCC
Q 017569 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGS-------DQPTFTLNFS 319 (369)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~y~~~-------~~~~~~l~~t 319 (369)
+.+.. +.++...++|.++.++|||+++|+|.|+++++++ .+ +.+.. ...|... ........+|
T Consensus 171 ~~g~~-------~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 241 (368)
T PRK13479 171 SFGAI-------PIDIAELGIDALISSANKCIEGVPGFGFVIARRS-EL-EACKGNSRSLSLDLYDQWAYMEKTGQWRFT 241 (368)
T ss_pred ccCCc-------cccccccCceEEEecCccccccCCCceEEEECHH-HH-HHhhcCCCCeeecHHHHHhhhcccCCCCCC
Confidence 54332 2344444789999999999999999999998753 21 11111 1111000 0000111135
Q ss_pred cchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 320 KGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 320 r~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+....+++..++..+..+| +.++ ++.++++++++.|+++|+
T Consensus 242 ~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 286 (368)
T PRK13479 242 PPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGF 286 (368)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56666778888998886654 6666 899999999999999875
No 54
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.88 E-value=4e-21 Score=184.28 Aligned_cols=256 Identities=12% Similarity=0.037 Sum_probs=182.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++...++ .+ .+...++.+++++.+++++|++++ .....++.||++++..++.++..+
T Consensus 10 ~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~la~~~~~~~~---~~~i~~~~~gt~~l~~~~~~~~~~------- 73 (355)
T TIGR03301 10 TSATVRDAMLVDWC----HW--DSEFNDVTDQVRDRLLALAGGDDN---HTCVLLQGSGTFAVEATIGSLVPR------- 73 (355)
T ss_pred CCHHHHHHhhhhcc----CC--CHHHHHHHHHHHHHHHHHhcCCCC---CcEEEEeCCcHHHHHHHHHhccCC-------
Confidence 34667777665321 22 123446777899999999999862 124678999999999988876432
Q ss_pred cCCCCCCCeEE-ecCCCcch-HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc--CcEEEEeeCCCCcccCCCHHH
Q 017569 148 QGKPYDKPNIV-TGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 148 ~g~~~~~~~Vi-~s~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~~~~~~~~tG~~~~l~~ 223 (369)
+++++ +....|.. +..+++..|++++.++.+.+ +.+|+++++++++++ +++|++++++|++|.+.|+++
T Consensus 74 ------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~ 146 (355)
T TIGR03301 74 ------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEA 146 (355)
T ss_pred ------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHH
Confidence 34544 45555544 56778889999999998754 789999999999754 467778889999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc-c
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV-F 302 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~-~ 302 (369)
|+++|+++ ++++++|++++.+.. ++++...++|.++.++|||+++|.|+|+++++++ .+ +.+. .
T Consensus 147 i~~l~~~~------~~~livD~~~s~g~~-------~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~-~~~~~~ 211 (355)
T TIGR03301 147 IAKVARSH------GAVLIVDAMSSFGAI-------PIDIEELDVDALIASANKCLEGVPGFGFVIARRD-LL-EASAGN 211 (355)
T ss_pred HHHHHHHc------CCEEEEEeccccCCc-------ccchhhcCccEEEecCCcccccCCceeEEEECHH-HH-HHhhCC
Confidence 99999999 999999998765433 2334434789999999999999999999998753 22 1111 0
Q ss_pred ccCccCCC-------CCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 303 HINYLGSD-------QPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 ~~~y~~~~-------~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
...+.... .......++.+.....++..+++.+..+| +.+. +..++++++++.|+++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~ 280 (355)
T TIGR03301 212 ARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF 280 (355)
T ss_pred CCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 01110000 00011224555555677788888887776 7766 889999999999998874
No 55
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.88 E-value=1.6e-20 Score=193.91 Aligned_cols=297 Identities=9% Similarity=-0.011 Sum_probs=207.0
Q ss_pred CCCHHHHHHHHHHhhhhcCC---CCccccccccC--CChHH-HHHHHHHHhccCCCCC-CCCcchHHHHHHHHHHHHHHh
Q 017569 36 SMPKEAAYQVINDELMLDGN---PRLNLASFVTT--WMEPE-CDKLVMASINKNYVDM-DEYPVTTELQNRCVNMIAHLF 108 (369)
Q Consensus 36 ~~~~~~i~~~l~~~~~~~~~---p~~~l~~~~~~--~~~~~-v~~~~~~~~~~n~~~~-~~~~~~~~le~~~~~~la~l~ 108 (369)
..|+.++++.++.+-..+.. ..+.|++ |+. ....+ +-....++++..++++ +.+++..++-.++.+|+++++
T Consensus 478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGs-CTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLt 556 (954)
T PRK12566 478 HHSETEMLRYLKQLENKDLALNQSMIPLGS-CTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAIT 556 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccCcccCcc-cccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence 47899999999988765432 2233333 221 11111 1112234555566776 567888888899999999999
Q ss_pred CCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCcc
Q 017569 109 NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYY 188 (369)
Q Consensus 109 g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~ 188 (369)
|++. ...--.+|+.+.+.++++++..+.. .|.. .+.+|++|...|.+....+...|++++.||++++ +
T Consensus 557 Gmd~------~Sl~p~sGA~gE~A~Lmair~yh~~----~Ge~-~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~-G 624 (954)
T PRK12566 557 GFDA------ICMQPNSGAQGEYAGLLAIRRYHRS----RGQS-QRDICLIPSSAHGTNPASAQMAGMRVVIVECDPD-G 624 (954)
T ss_pred CCCe------EeecCCchHHHHHHHHHHHHHHHHh----cCCC-CCCEEEecccccccCHHHHHHCCCEEEEeccCCC-C
Confidence 9995 1233347788888888887754321 2322 2568999999997766668888999999999864 8
Q ss_pred ccCHHHHHHHHh---hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC
Q 017569 189 VMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (369)
Q Consensus 189 ~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (369)
.+|+++|+++++ +++.+|++++|++..+..+|+++|+++|+++ |+++++|+|+.....++..| ..
T Consensus 625 ~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~------Galv~vDgA~~~a~~~l~~P------g~ 692 (954)
T PRK12566 625 NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH------GGQVYMDGANLNAQVGLARP------AD 692 (954)
T ss_pred CcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc------CCEEEEEeeChhhccCCCCh------hh
Confidence 999999999998 5788899999999876768899999999999 99999999986433321111 24
Q ss_pred CCCcEEEEcCccCCCCCCCeEEEEEeC---CCCccccccccc--CccCCCCCCc--cccCCcchhHHHHHHHHHHHhcHh
Q 017569 266 PLVKSINVSGHKYGLVYAGVGWVVWRT---KDDLPDELVFHI--NYLGSDQPTF--TLNFSKGSSQIIAQYYQFIRLGFE 338 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~~p~g~g~l~~~~---~~~~~~~~~~~~--~y~~~~~~~~--~l~~tr~~~~~l~~~~~l~~lg~~ 338 (369)
.++|.++.++|||+++|.|.|..+++. ++.+...+...+ +..+...... ...++-++..++..|..++.+|.+
T Consensus 693 ~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e 772 (954)
T PRK12566 693 IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ 772 (954)
T ss_pred cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH
Confidence 589999999999999998888877654 221111111111 0101000011 112444555688999999999999
Q ss_pred hHHHH--HhhHHHHHHHHHHHh
Q 017569 339 VIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 339 G~~~~--~~~~~a~~l~~~L~~ 358 (369)
+.+. .++.+|+|++++|.+
T Consensus 773 -Lk~aa~~ailnAnYla~rL~~ 793 (954)
T PRK12566 773 -LADASEVAILSANYLANQLGG 793 (954)
T ss_pred -HHHHHHHHHHHHHHHHHHhHh
Confidence 7776 689999999999976
No 56
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=2.3e-20 Score=180.50 Aligned_cols=227 Identities=15% Similarity=0.076 Sum_probs=164.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
.+.++.+++++|.+. ..+++||++++..++.++..+ ++.|+++.+.|++...+++..|++
T Consensus 54 ~~~~e~lA~~~g~~~-------~~i~~g~~~a~~~~~~~l~~~-------------gd~Vl~~~~~h~s~~~~~~~~g~~ 113 (370)
T TIGR02539 54 HDFLEDLAEFLGMDE-------ARVTHGAREGKFAVMHALCKE-------------GDWVVLDGLAHYTSYVAAERAGLN 113 (370)
T ss_pred HHHHHHHHHHhCCCc-------eEEECChHHHHHHHHHHhhCC-------------CCEEEECCcccHHHHHHHHHcCCE
Confidence 355666999999985 677899999998888877532 468999999999888888999999
Q ss_pred eEEEeccC-CccccCHHHHHHHHhh-------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 178 LKEVKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 178 v~~v~~~~-~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++.+|.++ +++.+|+++|++++++ ++++|++++++|++|.+.|+++|+++|+++ ++++++|+||+.
T Consensus 114 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~------~~~livDea~~~ 187 (370)
T TIGR02539 114 VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK------GVPLLLNCAYTV 187 (370)
T ss_pred EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc------CCeEEEECcccc
Confidence 99999864 3589999999999964 578999999999999999999999999999 999999999987
Q ss_pred ccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
+..+ .+....++|.++.++|||++++.++|+++.+++ .. +.+.....+..-.... .+.++.....+..++
T Consensus 188 g~~~-------~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 257 (370)
T TIGR02539 188 GRMP-------VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEVE-LLGCTSRGAPIVTMM 257 (370)
T ss_pred CCcC-------CCHHHcCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCccceee-eecccccccHHHHHH
Confidence 5431 111123589999999999987777898887543 32 2222211111110000 111233333455555
Q ss_pred HHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 330 YQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 330 ~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
+++... .+-+..+ +..+++++|++.|+++|+
T Consensus 258 ~al~~~-~~~l~~~~~~~~~~~~l~~~L~~~g~ 289 (370)
T TIGR02539 258 ASFPHV-VERVKRWDEEVKKTRWFVAELEDIGF 289 (370)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 555433 2334444 677778999999999985
No 57
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=1e-20 Score=187.51 Aligned_cols=257 Identities=13% Similarity=0.036 Sum_probs=179.2
Q ss_pred CChHHHHHHHHHHhccCC--CCCCC-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe---CCchHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY--VDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT---VGSSEAIMLAGLA 136 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~--~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t---~Ggt~a~~~al~~ 136 (369)
..+|.+.+++...+.+.. +++.. .....++|+.+++.++++||+++++ ..++ +||++||..++.+
T Consensus 45 ~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~-----~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 45 FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE-----WGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc-----ceeecCCCchHHHHHHHHHH
Confidence 456788888888775443 23211 1235677777889999999997631 3344 7899999998888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh----------hcceeEEEeccCCccccCHHHHHHHHhh-cCcE
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTIC 205 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~----------~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~ 205 (369)
+..+ ++.|+++...|.+....+.. .++++..++++.+ +.+|+++|++++++ ++++
T Consensus 120 l~~~-------------gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-g~id~~~L~~~l~~~~~~l 185 (452)
T PTZ00094 120 LLQP-------------HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK-GLIDYDKLEELAKAFRPKL 185 (452)
T ss_pred hcCC-------------CCEEEecccccCCcccccccccccccccceeeeeeeecccCCC-CCcCHHHHHHHHHHhCCCE
Confidence 7432 46899988888775443321 1233445556654 89999999999965 6776
Q ss_pred EEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe
Q 017569 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (369)
Q Consensus 206 v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~ 285 (369)
|++. .+.+|.+.|+++|+++|+++ |+++|||++++.+..+. +..+.. ..++|.+++++|||+++|.|
T Consensus 186 vi~~--~s~~g~~~di~~I~~i~~~~------ga~l~vDaaq~~G~i~~--~~~~~~--~~~~D~l~~S~hK~l~GP~G- 252 (452)
T PTZ00094 186 IIAG--ASAYPRDIDYKRFREICDSV------GAYLMADIAHTSGLVAA--GVLPSP--FPYADVVTTTTHKSLRGPRS- 252 (452)
T ss_pred EEEe--CCCCCCccCHHHHHHHHHHc------CCEEEEeccchhccccC--CCCCCC--CCCCcEEEcCCccCCCCCCc-
Confidence 6643 45689999999999999999 99999999999877631 110111 33799999999999999998
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
|+++++++ .. ..+.. ..... ..+.+.|+.+...++++..+++.+...+++++ +..+++++|++.|.+.|+
T Consensus 253 g~l~~~~~-~~-~~l~~---~~~~~-~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~ 324 (452)
T PTZ00094 253 GLIFYRKK-VK-PDIEN---KINEA-VFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGY 324 (452)
T ss_pred eEEEEecc-cc-hHHHH---hhccc-cCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 77777653 21 11100 00000 00112356666678888899999977777666 899999999999988764
No 58
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=7.2e-21 Score=188.05 Aligned_cols=271 Identities=14% Similarity=0.104 Sum_probs=179.0
Q ss_pred cCCCCcccccccc--CCCh----HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc
Q 017569 53 DGNPRLNLASFVT--TWME----PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (369)
Q Consensus 53 ~~~p~~~l~~~~~--~~~~----~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (369)
.+.+.++|..+.+ ...+ ..+.+.+.+++..+...|..+++..+|+++ +++++|.+. +++|+||
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~-------vv~t~gg 102 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY-------TIPTHQG 102 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc-------EEECCCH
Confidence 3445566666555 2222 246777777776555667778899999887 666777764 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-------Ccc--ccCHHHHHH
Q 017569 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-------GYY--VMNPVKAVE 197 (369)
Q Consensus 127 t~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-------~~~--~~d~~~L~~ 197 (369)
++|+.+++.++.++ ++ |+++++.+.++...+.+.|+.++.+|+++ +.+ .+|+++|++
T Consensus 103 t~A~~~~~~all~p-------------GD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~ 168 (460)
T PRK13238 103 RAAEQILFPVLIKK-------------GD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEA 168 (460)
T ss_pred HHHHHHHHHHhCCC-------------CC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHH
Confidence 99999998877542 35 88899888888888889999999999863 234 499999999
Q ss_pred HHhh----cCcEEEEeeCCCCcc-cC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC---C-cccccc-
Q 017569 198 LVDE----NTICVAAILGSTLTG-EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---D-LEWDFR- 264 (369)
Q Consensus 198 ~i~~----~~~~v~~~~~~~~tG-~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~-~~~~~~- 264 (369)
+|++ ++++|++++|+||+| .+ +++++|+++|+++ |+++++|+|+....+-|... . ....+.
T Consensus 169 ~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~------gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~ 242 (460)
T PRK13238 169 LIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY------GIPVVIDAARFAENAYFIKQREPGYKDKSIKE 242 (460)
T ss_pred HHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEECcchhhhhhhhhhccccccCCCHHH
Confidence 9984 689999999999998 44 4578999999999 99999999763211101110 0 001110
Q ss_pred -----CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh
Q 017569 265 -----LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV 339 (369)
Q Consensus 265 -----~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G 339 (369)
....|++++++||.+++|.| |+++.++.+... .+.. .........++ |..+.....++..+|+..-.+.
T Consensus 243 i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~-~~~~-~~~~~~g~~t~---~g~~~~~~~Ala~~l~e~~~~~ 316 (460)
T PRK13238 243 IAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFT-ECRT-LCILYEGFPTY---GGLAGRDMEALAVGLYEGMDED 316 (460)
T ss_pred HhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHH-Hhhh-cccccCCcccc---cCcHHHHHHHHHhhHHHhhChH
Confidence 23689999999999999986 888887643332 1111 10011111111 2222322333434444322222
Q ss_pred HHHHHhhHHHHHHHHHHHhcCC
Q 017569 340 IPSFCCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 340 ~~~~~~~~~a~~l~~~L~~~g~ 361 (369)
+.. ...+..++|.+.|++.|+
T Consensus 317 ~~~-~~~~~~~~l~~~L~~~G~ 337 (460)
T PRK13238 317 YLA-YRIGQVEYLGEGLEEAGV 337 (460)
T ss_pred HHH-HHHHHHHHHHHHHHHCCC
Confidence 222 344467999999998775
No 59
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.86 E-value=2.8e-20 Score=179.27 Aligned_cols=246 Identities=14% Similarity=0.017 Sum_probs=174.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
.+++++.+++.++++. . -...++.+++++++++++|.+. .++|+|+|+|+.+++.++..+
T Consensus 24 ~~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~~~a~~~g~~~-------~~~~~g~t~al~~al~al~~~------ 83 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN-Y------FEIKELVNKTGEYIANLLGVED-------AVIVSSASAGIAQSVAAVITR------ 83 (363)
T ss_pred CCCHHHHHHHHHHHhc-C------CCHHHHHHHHHHHHHHhhCCCe-------EEEEcCHHHHHHHHHHHHhcC------
Confidence 4568899998888642 1 2356778889999999999874 799999999999999987542
Q ss_pred hcCC----------CCCCCeEEecCCCcchH----HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEE-EeeC
Q 017569 147 EQGK----------PYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA-AILG 211 (369)
Q Consensus 147 ~~g~----------~~~~~~Vi~s~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~-~~~~ 211 (369)
|+ ...+++|+++.+.++.+ ..++.+.|+.+++++++ +.+|+++++++|+++|++++ ++++
T Consensus 84 --Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~ 158 (363)
T TIGR01437 84 --GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSH 158 (363)
T ss_pred --CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecC
Confidence 21 11234888888544433 56778889999888863 57999999999999998766 5778
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
++++|.+.|+++|+++|+++ |+++|+|+||+... . .....++|.+++|+||++.+|. .|+++.+
T Consensus 159 ~~~~g~~~~~~~i~~~a~~~------gi~vivD~a~~~~~--------~-~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~ 222 (363)
T TIGR01437 159 HCVQKSMLSVEDAAQVAQEH------NLPLIVDAAAEEDL--------Q-KYYRLGADLVIYSGAKAIEGPT-SGLVLGK 222 (363)
T ss_pred CCCcCCcCCHHHHHHHHHHc------CCeEEEECCCCCch--------H-HHHHcCCCEEEEeCCcccCCCc-eEEEEEc
Confidence 89999999999999999999 99999999997211 0 1111268999999999998887 6887754
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~ 362 (369)
++.+. ... . +..+....+. .++ ...+++.+++..+-..|.+.+ +..+.+.+++++|.+.+.+
T Consensus 223 -~~~i~-~~~--~-~~~~~~~~~~-~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~ 285 (363)
T TIGR01437 223 -KKYIE-WVK--L-QSKGIGRAMK-VGK---ENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGV 285 (363)
T ss_pred -HHHHH-HHH--h-ccCCCcceec-cCH---HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCe
Confidence 32321 111 1 0011000000 011 235777778887755565555 5556777899999987543
No 60
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=6.1e-20 Score=180.05 Aligned_cols=269 Identities=13% Similarity=0.023 Sum_probs=190.0
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 55 ~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
++.++|+.+.|..+ ++.+.+.+.++++.+...|....+..+|++++.+++.+.+|.+.+. ...+++|+|+++|+.++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~--~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP--EKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCHHHHHHHH
Confidence 45567777777654 5678888888876654556666789999999999999988876422 12488999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+.++.++ +++|++++++|..+...++..|++++.++++++++.+|+++|++++.+++++|++++|+|
T Consensus 132 ~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~N 198 (413)
T PLN00175 132 ILGLINP-------------GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHN 198 (413)
T ss_pred HHHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCC
Confidence 8876542 478999999999999999999999999999764589999999999998999999999999
Q ss_pred CcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCCC-CCCCeEE
Q 017569 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGW 287 (369)
Q Consensus 214 ~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~ 287 (369)
|||.+. ++++|+++|+++ ++|+++|++|..+... .+... ..+. ...-..+..+..|.++ .++.+|+
T Consensus 199 PtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~l~~~--~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 199 PTGKMFTREELELIASLCKEN------DVLAFTDEVYDKLAFE--GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CcEEEEecccCccccC--CcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 999985 588899999999 9999999999875431 11000 1111 1112234456788876 6688999
Q ss_pred EEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++..+ +.. ..+.....+. . . +...+.++++...+ +..-+++. +..+..+++.+.|++.|
T Consensus 271 ~v~~~-~l~-~~l~~~~~~~-----~----~---~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 333 (413)
T PLN00175 271 AIAPP-HLT-WGVRQAHSFL-----T----F---ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG 333 (413)
T ss_pred eEeCH-HHH-HHHHHHHhhc-----c----C---CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 98743 222 2221111111 0 0 11233445555555 22224444 67778888999998876
No 61
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.86 E-value=1e-20 Score=180.44 Aligned_cols=252 Identities=15% Similarity=0.006 Sum_probs=167.1
Q ss_pred ccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 62 SFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 62 ~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
+..+..+++.+.+++.++..... .+...+ ..+++++++++++| +. ..++++||++++..++.++..+
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~----~~~~l~~~~a~~~g-~~------~~~~~~~gt~a~~~~~~~l~~~- 70 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGDD-VYGEDP----TTAKLEARAAELFG-KE------AALFVPSGTAANQLALAAHTQP- 70 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCCc-ccCCCH----HHHHHHHHHHHHhC-CC------eEEEecCchHHHHHHHHHhcCC-
Confidence 34455567888888877653221 222223 34456667999999 32 3889999999998888876432
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHH---HHhhhcceeEEEeccCCccccCHHHHHHHHhh-------cCcEEEEeeC
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NTICVAAILG 211 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~~~~v~~~~~ 211 (369)
+++|+++.++|.++.. .++..|++++.+|.+. +.+|+++|++++++ ++++|++++|
T Consensus 71 ------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 71 ------------GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred ------------CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 4689999999987554 3456799999998753 68999999999975 6889999999
Q ss_pred CCCccc--CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 212 STLTGE--FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 212 ~~~tG~--~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
+|+.|. .+++++|+++|+++ ++++|+|+||..+... ...........++|+++.++|||++.|.| .++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~------~~~livDea~~~~~~~--~~~~~~~~~~~~~d~~~~s~sK~~~~~~g--~~~ 206 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKEN------GLPLHLDGARLANAAA--ALGVALKTYKSGVDSVSFCLSKGGGAPVG--AVV 206 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHc------CCeEeechHHHHHHHH--hcCCCHHHHHhcCCEEEEeccccCCCccc--eEE
Confidence 997443 36788999999999 9999999998543220 01001111124789999999999987753 344
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.+++.. ..+.......+ ++.+ ...+.+++++..+...++.+. +..++++++++.|+++|+
T Consensus 207 ~~~~~~~-~~~~~~~~~~~---------~~~~-~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 269 (338)
T cd06502 207 VGNRDFI-ARARRRRKQAG---------GGMR-QSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG 269 (338)
T ss_pred ECCHHHH-HHHHHHHHHhC---------CChh-hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4443332 22211000000 1111 123444556666655556555 888999999999999876
No 62
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=7.5e-20 Score=192.50 Aligned_cols=272 Identities=15% Similarity=0.034 Sum_probs=187.7
Q ss_pred ccccCCCh-HHHHHHHHHHhcc---CCCC-CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 62 SFVTTWME-PECDKLVMASINK---NYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 62 ~~~~~~~~-~~v~~~~~~~~~~---n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
+..+++++ ..+.+++..++.. |++. +..+....++.+++++.+++++|++++ ...+++|+|+|+|+.++...
T Consensus 40 ~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~---~~~VvFtsnaT~alnlva~~ 116 (805)
T PLN02724 40 HAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPS---DYACVFTSGATAALKLVGET 116 (805)
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCcc---ceEEEEeCChHHHHHHHHHH
Confidence 33334433 4566666555432 3332 112334566777899999999999752 13479999999999887665
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH---HhhhcceeEEEeccC-------CccccCH--HHHHHHHh----
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEE-------GYYVMNP--VKAVELVD---- 200 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~-------~~~~~d~--~~L~~~i~---- 200 (369)
+. +. .+++|+++...|.++... ++..|+.++.++++. ..+.+++ ++|++.++
T Consensus 117 l~--~~----------~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 117 FP--WS----------SESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred CC--CC----------CCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 42 10 146899998899875543 344599999998862 1244544 66776642
Q ss_pred ------hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhcc---CCCceEEeecccccccccccCCCccccccCCCCcEE
Q 017569 201 ------ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET---GWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 201 ------~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~---~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi 271 (369)
+++++|++++.+|.+|.+.|++.|..+++.. .++ ..++++++|||++.+.. ++++...++|++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~-~~~~~~~g~~~v~vDaaQ~~g~~-------piDv~~~~~Dfl 256 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQ-HSNFSKSGRWMVLLDAAKGCGTS-------PPDLSRYPADFV 256 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhc-ccccccCcceEEEeehhhhcCCC-------CCChhhcCCCEE
Confidence 4568999999999999999999876555532 000 00357999999987665 356665689999
Q ss_pred EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-----------------CCccccCCcchhHHHHHHHHHHH
Q 017569 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ-----------------PTFTLNFSKGSSQIIAQYYQFIR 334 (369)
Q Consensus 272 ~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~-----------------~~~~l~~tr~~~~~l~~~~~l~~ 334 (369)
++|+|||+++|.|+|+|++|++ .+. .+ .+.+.++.. ..---.||.+...++++.++++.
T Consensus 257 ~~S~HK~~GgP~G~G~L~vr~~-~~~-~l--~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~ 332 (805)
T PLN02724 257 VVSFYKIFGYPTGLGALLVRRD-AAK-LL--KKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL 332 (805)
T ss_pred EEecceeccCCCCceEEEEehh-hhh-hh--cCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH
Confidence 9999999988999999999864 211 11 122222210 00012489999889999999999
Q ss_pred hcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 335 LGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 335 lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+...|+..+ +..++++||.+.|.++.
T Consensus 333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~ 360 (805)
T PLN02724 333 LNRLTISAIAMHTWALTHYVANSLRNLK 360 (805)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHhcc
Confidence 987788888 89999999999999875
No 63
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.85 E-value=1.7e-19 Score=171.99 Aligned_cols=260 Identities=15% Similarity=-0.007 Sum_probs=183.1
Q ss_pred HHHHHHHH-HHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 70 PECDKLVM-ASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~-~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+.+.+.+. ...+.+...+...++..++++.+.+++...+|.+.. ....++++|+++++..++.++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---~~~~~~~~~~t~a~~~~~~~~~~~-------- 82 (350)
T cd00609 14 PEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP---PEEIVVTNGAQEALSLLLRALLNP-------- 82 (350)
T ss_pred HHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHHHHHHhCCC--------
Confidence 44444433 334444455566678899999999999988775321 235889999999998888876431
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCH--HHHHHHHhhcCcEEEEeeCCCCcccCCCHHHH--
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP--VKAVELVDENTICVAAILGSTLTGEFEDVKLL-- 224 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~--~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I-- 224 (369)
+++|+++.+.|.++..+++..|+.++.++.+++ +..+. +.++..+++++++|+++.++|++|.+.|++++
T Consensus 83 -----g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 83 -----GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE-GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred -----CCEEEEcCCCchhHHHHHHHCCCEEEEEecccc-cCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 478999999999999999999999999999764 45554 67777777889999999999999999876655
Q ss_pred -HHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCccccccc
Q 017569 225 -HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 225 -~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
.++|+++ ++++|+|+||+++......+.........+.|.+..+.||+++ ++.+.|++++++++.. ..+..
T Consensus 157 l~~~~~~~------~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~~ 229 (350)
T cd00609 157 LAELAKKH------GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLKK 229 (350)
T ss_pred HHHHHHhC------CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHHH
Confidence 4899999 9999999999876542111100012224467888899999987 5667899987653332 22211
Q ss_pred ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 303 ~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
...+. .++.+.....+++..++... ++++++ +..++++++.+.|++.+...
T Consensus 230 ~~~~~---------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 282 (350)
T cd00609 230 LLPYT---------TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV 282 (350)
T ss_pred HHHhc---------ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 11111 12333334455555555443 566666 88999999999999987754
No 64
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=176.03 Aligned_cols=265 Identities=13% Similarity=-0.014 Sum_probs=184.0
Q ss_pred ccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.+..+ ++.+.+++.+++.+....|....+..++++++.+++++.+|...+. ...++|+|+++++..++.+
T Consensus 27 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 27 LPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPP---ERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCc---ceEEEeCChHHHHHHHHHH
Confidence 55666555543 5778888888776654456666789999999999999998944321 3488999999999888887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC--CccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
+.++ ++.|+++.++|..+...++..|++++.+|++. +++.+|+++|++.+++++++|+++.|+||
T Consensus 104 l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NP 170 (382)
T PRK06108 104 LVGP-------------GDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNP 170 (382)
T ss_pred hcCC-------------CCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCC
Confidence 6442 46899999999999999999999999999963 34789999999999888999999999999
Q ss_pred cccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--cccc-CCCCcEEEEcCccCCC-CCCCeEE
Q 017569 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFR-LPLVKSINVSGHKYGL-VYAGVGW 287 (369)
Q Consensus 215 tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~ 287 (369)
||.+. ++++|.++|+++ ++|+++|++|+.+.... ..... .++. ...-..+..+.+|.++ .+.++|+
T Consensus 171 tG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRH------GLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred CCcccCHHHHHHHHHHHHHC------CcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 99874 578899999999 99999999999765420 00101 1111 1122355667999763 5678899
Q ss_pred EEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++..+ +.. ..+.....+... + ...+.+.++...+ +.+-++++ +..++.+++.+.|++.
T Consensus 244 ~~~~~-~~~-~~~~~~~~~~~~--------~----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (382)
T PRK06108 244 LVAPP-ALG-QVLEKLIEYNTS--------C----VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL 305 (382)
T ss_pred eeCCH-HHH-HHHHHHHHhccc--------C----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98743 222 222111111100 1 1122333333333 33334444 7778888899999876
No 65
>PRK12414 putative aminotransferase; Provisional
Probab=99.85 E-value=3.2e-19 Score=173.41 Aligned_cols=268 Identities=13% Similarity=0.034 Sum_probs=183.2
Q ss_pred CccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+.+.+.. +++.+.+++.+++......|....+..++++++++++++++|.+.+. ....++|+|+++++..++.
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 31 ALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP--ASEVTVIASASEGLYAAIS 108 (384)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEECChHHHHHHHHH
Confidence 35565555543 35667788777665444455556788999999999999999986321 1248999999999988888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++.++ +++|++++++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++|+|||
T Consensus 109 ~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPT 175 (384)
T PRK12414 109 ALVHP-------------GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPS 175 (384)
T ss_pred HhcCC-------------CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCC
Confidence 76542 47899999999999999999999999999976558999999999998889999999999999
Q ss_pred ccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-ccc-CCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 216 GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 216 G~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|.+ +++++|+++|+++ ++++++|++|..+...- .+.... .+. ...--.+..+..|.++ .+.++|+++
T Consensus 176 G~~~s~~~~~~i~~~a~~~------~~~ii~De~Y~~~~~~~-~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v 248 (384)
T PRK12414 176 ATVFSAADLARLAQLTRNT------DIVILSDEVYEHVVFDG-ARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCL 248 (384)
T ss_pred CcCCCHHHHHHHHHHHHHC------CeEEEEhhhhhhccCCC-CCccCcccCcCccCcEEEEecccccccCccceEEEEe
Confidence 997 5688999999999 99999999998654310 010010 111 1111245556889774 667889998
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+ +.. ..+.....+. .+ +. ..+.++++...+.. ..+.+. ...+..+++.+.|++.|
T Consensus 249 ~~~-~l~-~~l~~~~~~~-----~~---~~----s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 308 (384)
T PRK12414 249 APA-ELM-DEIRKVHQFM-----VF---SA----DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR 308 (384)
T ss_pred cCH-HHH-HHHHHHHhhe-----ec---CC----CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 743 222 2221100000 00 01 12334444444422 122233 56677788888888766
No 66
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=4.9e-19 Score=173.52 Aligned_cols=275 Identities=15% Similarity=0.072 Sum_probs=189.1
Q ss_pred cCCCCccccccccC-----CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc
Q 017569 53 DGNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (369)
Q Consensus 53 ~~~p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (369)
.+...++|+.+.|. ++++.+.+++.+++..+ ...|....+..++++++.+++.+.+|.+.+. ..+++|+|+
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL---DDVFITSGC 105 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCh
Confidence 44555788877775 34577888888887765 3456666788999999999998887765422 358999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcE
Q 017569 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTIC 205 (369)
Q Consensus 127 t~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~ 205 (369)
++|+.+++.++.++ ++.|++++++|..+...++..|++++.+|+++ +++.+|+++|++++++++++
T Consensus 106 ~~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 106 TQAIDVALSMLARP-------------GANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred HHHHHHHHHHHhCC-------------CCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 99999988887542 47899999999999888999999999999863 45789999999999888999
Q ss_pred EEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-ccc-cccCCCCcEEE-EcCccC-
Q 017569 206 VAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DFRLPLVKSIN-VSGHKY- 278 (369)
Q Consensus 206 v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~~~~~~Dsi~-~~~hK~- 278 (369)
|++++|+||||.+ +++++|+++|+++ ++++++|++|+.+... ... .+. .+. .....+. -+.-|.
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~-~~~~vi~~~SfSK~f 243 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKL------KILVIADEVYGHLAFG--SNPFVPMGVFG-SIVPVLTLGSLSKRW 243 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEehhhhhcccC--CCCcccHHHhc-ccCcEEEEcccchhc
Confidence 9999999999998 5789999999999 9999999999975431 111 111 111 1112333 347786
Q ss_pred CCCCCCeEEEEEeCCCCcc--cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--Hh-hHHHH--HhhHHHHH
Q 017569 279 GLVYAGVGWVVWRTKDDLP--DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FE-VIPSF--CCVDHKKL 351 (369)
Q Consensus 279 l~~p~g~g~l~~~~~~~~~--~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~~-G~~~~--~~~~~a~~ 351 (369)
+..++.+|+++..+++.+. ..+........ +. . +. ...+.++++...+. .+ -+++. +..+..++
T Consensus 244 ~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~----~~-~-~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~ 314 (409)
T PLN02656 244 IVPGWRLGWFVTTDPSGSFRDPKIVERIKKYF----DI-L-GG---PATFIQAAVPTILEQTDESFFKKTINILKQSSDI 314 (409)
T ss_pred cCcceeEEEEEEeCcccccccHHHHHHHHHHH----hh-h-cC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 7778999999985432110 01100000000 00 0 01 12344445455542 22 24444 56666778
Q ss_pred HHHHHHhcCC
Q 017569 352 SSFFVIHSSY 361 (369)
Q Consensus 352 l~~~L~~~g~ 361 (369)
+.+.|++.+.
T Consensus 315 ~~~~L~~~~~ 324 (409)
T PLN02656 315 CCDRIKEIPC 324 (409)
T ss_pred HHHHHhhCCC
Confidence 8888888654
No 67
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-19 Score=175.95 Aligned_cols=264 Identities=14% Similarity=0.110 Sum_probs=184.6
Q ss_pred ccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.+.. +++.+.+++.+++......|...++..++++++.+++.+.+|.+.+. ...++|+|+++|+.+++.+
T Consensus 36 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 36 ISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV---DNVIVTAGAYEATYLAFES 112 (391)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ccEEEeCChHHHHHHHHHH
Confidence 5555555543 34678888888776655556566789999999999998888765321 3589999999999988887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+..+ ++.|++++++|..+...+...|++++.+|++++ ++.+|+++|++++++++++|++++|+|||
T Consensus 113 l~~~-------------g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPt 179 (391)
T PRK08361 113 LLEE-------------GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPT 179 (391)
T ss_pred hcCC-------------CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCC
Confidence 6442 468999999999999999999999999999753 47899999999999999999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCC-CCCeEEEEE
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV-YAGVGWVVW 290 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~-p~g~g~l~~ 290 (369)
|.+.| +++|+++|+++ ++++++|++|+.+... ......... ....+.++.+.+|.++. ..+.|++++
T Consensus 180 G~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDY------NIYILSDEPYEHFLYE--GAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred CcCcCHHHHHHHHHHHHHc------CeEEEEEcccccceeC--CCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 99988 88999999999 9999999999875431 111111111 12346677889998753 344899987
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH----hhHHHH--HhhHHHHHHHHHHHhc
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~----~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.+ +.. ..+.....+... +. ..+.+.++...+.. +.++++ +..++.+.+.+.|++.
T Consensus 252 ~~-~~~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 312 (391)
T PRK08361 252 PE-QVI-KDMIKLHAYIIG--------NV----ASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM 312 (391)
T ss_pred CH-HHH-HHHHHHHhhhcc--------CC----ChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 222 221111111100 11 12334444444422 234444 6677777888888876
No 68
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=4.1e-19 Score=174.95 Aligned_cols=216 Identities=14% Similarity=0.099 Sum_probs=163.6
Q ss_pred CCCCccccccccC-----CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch
Q 017569 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (369)
Q Consensus 54 ~~p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (369)
+.+.++|+.+.|. .+++.+.+++.+++..+. ..|....+..++++++.+++.+..|.+.+. ..+++|+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~v~it~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST---DDIYLTAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh---hhEEEeCCHH
Confidence 4566777777664 234678888888886543 345555688999999999888777765422 4589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEE
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v 206 (369)
+|+.+++.++.++ +++|+++.|+|+.+...+...|++++.+++.+ +++.+|+++|+++++++++++
T Consensus 128 ~al~l~~~~l~~~-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 128 QAIEIIMSVLAQP-------------GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 9999988887542 47899999999999999999999999999753 458999999999999999999
Q ss_pred EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEc-CccC-CC
Q 017569 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVS-GHKY-GL 280 (369)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~-~hK~-l~ 280 (369)
++++|+||||.+.+ +++|+++|+++ ++++++|++|..+...- .+..+. .+. .....++++ .-|. +.
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~------~i~ii~De~Y~~~~~~~-~~~~~~~~~~-~~~~vi~~~S~SK~~~~ 266 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKL------GILVIADEVYDHLTFGS-KPFVPMGVFG-EVAPVLTLGSISKRWVV 266 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccchhhccCC-CCccchhhhc-ccCcEEEEeccccccCC
Confidence 99999999999976 88899999999 99999999998754310 010111 111 112234444 4455 78
Q ss_pred CCCCeEEEEEeCC
Q 017569 281 VYAGVGWVVWRTK 293 (369)
Q Consensus 281 ~p~g~g~l~~~~~ 293 (369)
..+.+|+++..++
T Consensus 267 pG~RlG~iv~~~~ 279 (430)
T PLN00145 267 PGWRLGWIATCDP 279 (430)
T ss_pred CCeeEEEEEEecc
Confidence 8899999998543
No 69
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.84 E-value=6.1e-19 Score=164.88 Aligned_cols=299 Identities=13% Similarity=0.034 Sum_probs=210.6
Q ss_pred CCCCCCCHHHHHHHHHHhhhhcC---CCCccccccccCCChHHHHH---HHHHHhccCCCCCCC-CcchHHHHHHHHHHH
Q 017569 32 MPDNSMPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDK---LVMASINKNYVDMDE-YPVTTELQNRCVNMI 104 (369)
Q Consensus 32 ~p~~~~~~~~i~~~l~~~~~~~~---~p~~~l~~~~~~~~~~~v~~---~~~~~~~~n~~~~~~-~~~~~~le~~~~~~l 104 (369)
.|....|+-++++.+..+-..+- +..+.|++...... +.+-+ ...++.+-.++.+.. .++..++..++.+||
T Consensus 40 ~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~N-p~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L 118 (496)
T COG1003 40 PPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLN-PKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWL 118 (496)
T ss_pred CCCccccHHHHHHHHHHHHhcccccccCccCCcccccccC-chhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 34456788999999988766432 22344444222111 22111 222445556666543 458899999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
+++.|++. ...=-..|+.+=+.++++++..... .|. .++.++|+|+..|-..-..+.+.|.+|+.|+++
T Consensus 119 ~~ITG~Da------vsLQP~AGAqGE~aGll~Ir~YHe~----rG~-~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~ 187 (496)
T COG1003 119 KEITGMDA------VSLQPNAGAQGEYAGLLAIRAYHES----RGE-GHRNICLIPDSAHGTNPASAAMAGFKVVVVKCD 187 (496)
T ss_pred HHhcCCce------eeccCCCCcchhhHHHHHHHHHHHH----cCC-CcCcEEEeeccccCCChhhHhhcCceEEEEecC
Confidence 99999985 1233347778888888888765332 232 256799999999999999999999999999999
Q ss_pred CCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc
Q 017569 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (369)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (369)
++ |.+|+++|++++.+++.++.+|+|||- |.+ .+|.+|+++.+++ |..+..|||--..++...+|.
T Consensus 188 ~~-G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~------Gg~vY~DGANlNA~vG~~rPG----- 254 (496)
T COG1003 188 EN-GNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA------GGQVYYDGANLNAIVGLARPG----- 254 (496)
T ss_pred CC-CCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc------CCEEEecCcchhhhhcccccc-----
Confidence 85 999999999999999999999999988 888 5799999999999 999999999654444323331
Q ss_pred cCCCCcEEEEcCccCCCC-----CCCeEEEEEeCCCCcccccccc------cCccCCCCCCccc----cCCcchhHHHHH
Q 017569 264 RLPLVKSINVSGHKYGLV-----YAGVGWVVWRTKDDLPDELVFH------INYLGSDQPTFTL----NFSKGSSQIIAQ 328 (369)
Q Consensus 264 ~~~~~Dsi~~~~hK~l~~-----p~g~g~l~~~~~~~~~~~~~~~------~~y~~~~~~~~~l----~~tr~~~~~l~~ 328 (369)
..|+|.+-+|.||.++. ++|.|-+.+|.. +...+... ..|.........+ ..--++...+..
T Consensus 255 -d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a 331 (496)
T COG1003 255 -DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIA 331 (496)
T ss_pred -ccccceEEeecccccccCCCCCCCCCCceehHhh--ccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHH
Confidence 44899999999999644 467777888642 22222211 1111110000000 011123346889
Q ss_pred HHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 329 YYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 329 ~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
|++++.+|.+|+++. ...-||.|++.+|+.
T Consensus 332 ~~YI~~mG~~GL~~ase~AvLNANYia~rL~~ 363 (496)
T COG1003 332 WAYIRMMGADGLKQASEVAVLNANYIARRLKG 363 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh
Confidence 999999999999999 899999999999984
No 70
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.84 E-value=3.4e-19 Score=174.23 Aligned_cols=278 Identities=11% Similarity=0.007 Sum_probs=178.4
Q ss_pred HHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhccC-----C--CCCCCCcchHHHHHHHHHHHHHHhCCCC
Q 017569 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-----Y--VDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n-----~--~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (369)
.++.+.+.+.-... +..+||.. .+++.++.+.+++...+... . ..+...+...++|+.+++++++++|.+.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~ 82 (402)
T cd00378 5 PEIAEIIKKENERQ-RETLELIA-SENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEY 82 (402)
T ss_pred HHHHHHHHHHHHHH-HhCeeeec-cCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 55666665543222 33455432 23345678888887655321 1 1122334567888888899999999975
Q ss_pred CCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-----HhhhcceeEEEeccCC-
Q 017569 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-----ARYFEVELKEVKLEEG- 186 (369)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~-----~~~~G~~v~~v~~~~~- 186 (369)
. .++.+||++|+..++.++..+ +++|++++++|.++... ++..|..++.++++.+
T Consensus 83 ~------~v~~~sgt~a~~~~l~~l~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (402)
T cd00378 83 A------NVQPHSGSQANLAVYFALLEP-------------GDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDP 143 (402)
T ss_pred e------eeecCCcHHHHHHHHHHhcCC-------------CCEEEEecCccCccccccccccccccceeEEEecCCcCc
Confidence 1 344446789999888887542 46899999888754332 5667887777777543
Q ss_pred -ccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc
Q 017569 187 -YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR 264 (369)
Q Consensus 187 -~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (369)
++.+|++++++++. +++++|+++.+++ |...|+++|+++|+++ ++++++|++|..+.. ........+.
T Consensus 144 ~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~------~~~li~D~a~~~g~~--~~g~~~~~~~ 213 (402)
T cd00378 144 ETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEV------GAYLLVDMAHVAGLV--AGGVFPNPLP 213 (402)
T ss_pred ccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhc------CCEEEEEccchhhhh--hcccCCCccc
Confidence 58999999999995 5788888777755 5677999999999999 999999999643322 1111112222
Q ss_pred CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH
Q 017569 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF 343 (369)
Q Consensus 265 ~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~ 343 (369)
++|.++.++|||+.+|.| |++++.+++.. ..+... ..+. .++.......++..++..+...++.++
T Consensus 214 --~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~a~~~al~~~~~~~~~~~ 280 (402)
T cd00378 214 --GADVVTTTTHKTLRGPRG-GLILTRKGELA-KKINSAVFPGL---------QGGPHLHVIAAKAVALKEALEPEFKAY 280 (402)
T ss_pred --CCcEEEeccccCCCCCCc-eEEEeccHHHH-HHHHHHhCccc---------cCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence 679999999999966665 66666543332 222110 0111 122222233444445554433345555
Q ss_pred --HhhHHHHHHHHHHHhcCC
Q 017569 344 --CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 344 --~~~~~a~~l~~~L~~~g~ 361 (369)
+..++++++++.|.+.|+
T Consensus 281 ~~~~~~~~~~l~~~L~~~g~ 300 (402)
T cd00378 281 AKQVVENAKALAEALKERGF 300 (402)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 889999999999998875
No 71
>PRK09082 methionine aminotransferase; Validated
Probab=99.84 E-value=1.7e-19 Score=175.41 Aligned_cols=269 Identities=14% Similarity=0.018 Sum_probs=186.1
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+.+.+... ++.+.+.+.++++.....|....+..++++++.+++++++|.+.+. ...+++|+|+++|+.+++
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~--~~~i~~t~G~~~al~~~~ 108 (386)
T PRK09082 31 GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA--DSEITVTAGATEALFAAI 108 (386)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCHHHHHHHHH
Confidence 3456666555533 4677888888776555556666789999999999999999986522 124889999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.++.++ +++|+++.++|..+..+++..|++++.+|++++++.+|++++++++++++++|+++.|+||
T Consensus 109 ~~~~~~-------------gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 175 (386)
T PRK09082 109 LALVRP-------------GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNP 175 (386)
T ss_pred HHHcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCC
Confidence 876542 4789999999999999999999999999997556899999999999988999999999999
Q ss_pred cccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 215 TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 215 tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
||.+ +++++|.++|+++ ++++++|.+|+.+...- .+... ..+. ...-..+..+..|.++ ...++|++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~------~i~li~De~y~~~~~~~-~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i 248 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGT------DIYVLSDEVYEHIVFDG-AGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYC 248 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHC------CEEEEEehhhhhhccCC-CCCCChhhCcCccCcEEEEeechhhccchhhhhhhh
Confidence 9987 6789999999999 99999999998754310 01000 0111 1122344556789874 56678999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+.. ++.+ ..+.....+.. + +- ..+.++++...+ ..+-++++ ...++.+++.+.|++.|
T Consensus 249 v~~-~~l~-~~~~~~~~~~~-----~----~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (386)
T PRK09082 249 VAP-AALS-AEFRKVHQYNT-----F----TV---NTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR 310 (386)
T ss_pred hCC-HHHH-HHHHHHHhhhc-----C----CC---ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 863 2222 22211111110 0 11 122222223333 23334444 66778888888888754
No 72
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=1.5e-18 Score=170.02 Aligned_cols=231 Identities=14% Similarity=0.111 Sum_probs=173.4
Q ss_pred HHHHHHHHHHhhhhcCC-CCccccccccC-----CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCC
Q 017569 39 KEAAYQVINDELMLDGN-PRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~-p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (369)
..+..+.+.+.+..+.+ +.++|+.+.|. ++++.+.+++.++++.. ...|....+..++++++.+++.+.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 55666666665544444 44678877775 45677888888888754 3446566788999999999998877765
Q ss_pred CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCcccc
Q 017569 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVM 190 (369)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~ 190 (369)
.+. ..+++|+|+++++.+++.++.++ ++.|+++.|+|+.+...++..|++++.++++ ++++.+
T Consensus 95 ~~~---~~I~it~G~~~al~~~~~~l~~~-------------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (409)
T PLN00143 95 LSP---DDVYLTLGCKHAAEIIIKVLARP-------------EANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEV 158 (409)
T ss_pred CCH---hhEEEecChHHHHHHHHHHHcCC-------------CCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcC
Confidence 422 35899999999999998887552 4789999999999999999999999999985 345889
Q ss_pred CHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccccCC
Q 017569 191 NPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLP 266 (369)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~ 266 (369)
|+++|+++++++++.+++++|+||||.+.+ +++|.++|+++ ++++++|++|..+...- .+..+ ..+. .
T Consensus 159 d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~~~-~~~~~~~~~~-~ 230 (409)
T PLN00143 159 DLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL------GILVIADEVYGHIVFGS-KPFVPMGLFA-S 230 (409)
T ss_pred CHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc------CCeEEEEccccccccCC-CCCcchhhhc-c
Confidence 999999999888999999999999999965 77888999999 99999999998754310 00011 0111 1
Q ss_pred CCcE-EEEcCccC-CCCCCCeEEEEEeCC
Q 017569 267 LVKS-INVSGHKY-GLVYAGVGWVVWRTK 293 (369)
Q Consensus 267 ~~Ds-i~~~~hK~-l~~p~g~g~l~~~~~ 293 (369)
.... +..+.-|. +....++|+++..++
T Consensus 231 ~~~vi~~~SfSK~f~~pGlRvG~~v~~~p 259 (409)
T PLN00143 231 IVPVITLGSISKRWMIPGWGLGWLVTCDP 259 (409)
T ss_pred cCcEEEEccchhhcCCCccceEEEEeeCc
Confidence 1123 33457787 777899999998543
No 73
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=2.2e-19 Score=174.23 Aligned_cols=249 Identities=10% Similarity=0.007 Sum_probs=171.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (369)
+...+++.+++..+... .++...+||++ +++++|.+. .++++|||+|+.+++.++ ..
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~lal~al~~~--------- 71 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALEQA----FCQLTGNQH-------AIAVSSATAGMHITLMALGIG--------- 71 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC---------
Confidence 44466677777665443 34566777766 888888874 788999999999988876 22
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
.+++|++++++|.++..++...|++++.++++.+++.+|+++|+++++++|++|+ +++++|.+.|+++|.++|
T Consensus 72 ----~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a 144 (379)
T PRK11658 72 ----PGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIG 144 (379)
T ss_pred ----CCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHH
Confidence 1478999999999999999999999999999876688999999999999998876 566789999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc-cccCcc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV-FHINYL 307 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~-~~~~y~ 307 (369)
+++ ++++++|+|++.+.. ... ......+++.++++.+|++.++.| |+++..+++.....-. ....+.
T Consensus 145 ~~~------gi~vi~D~a~a~g~~--~~~---~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~ 212 (379)
T PRK11658 145 ERY------GIPVIEDAAHAVGTY--YKG---RHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLG 212 (379)
T ss_pred HHc------CCeEEEECCCccCCe--ECC---eecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCC
Confidence 999 999999999985443 111 112233568889999999866543 6666655543321100 011100
Q ss_pred C--------CCCCCc--cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 308 G--------SDQPTF--TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 308 ~--------~~~~~~--~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. ....++ ...|+..-. ..+-+++.....+++.+. +..++++++.+.|.+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~G~n~~~--~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 213 VDAFDRQTQGRAPQAEVLTPGYKYNL--ADINAAIALVQLAKLEALNARRREIAARYLQALADLPF 276 (379)
T ss_pred cchhhhhcccCCCcceeeccccccCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 0 000000 001221111 122344444444677776 899999999999988764
No 74
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.84 E-value=8e-19 Score=176.88 Aligned_cols=213 Identities=11% Similarity=0.039 Sum_probs=159.6
Q ss_pred cCCCCccccccccC---C-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 53 DGNPRLNLASFVTT---W-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 53 ~~~p~~~l~~~~~~---~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
.++..++|+.+.|. + +++.+.+.+.+++.. ...|....+..+|++++.+++.+..+.+.+ ...+++|+|+++
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~---~~~I~it~G~~e 219 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVD---VDDIYTGNGVSE 219 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCC---hhHEEEeCcHHH
Confidence 45555667666663 2 256677777776653 334556668899999988888765443221 135899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEE
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVA 207 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~ 207 (369)
++.+++.++.++ +++|+++.|+|+.+...++..|+.++.+++++ ++|.+|+++|++++++++++|+
T Consensus 220 al~~~~~~l~~~-------------Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~ 286 (517)
T PRK13355 220 LINLSMSALLDD-------------GDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIV 286 (517)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEE
Confidence 999998887542 47999999999999999999999999999875 3589999999999999999999
Q ss_pred EeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEEEE-cCccC-CC
Q 017569 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINV-SGHKY-GL 280 (369)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi~~-~~hK~-l~ 280 (369)
+++|+||||.+.+ +++|+++|+++ ++++++|++|..+.+. .... ..+. ......+++ +..|. ++
T Consensus 287 i~nP~NPTG~v~~~~~l~~i~~~a~~~------~~~ii~DE~Y~~~~~~--~~~~-~s~~~~~~~~~vi~~~S~SK~~~~ 357 (517)
T PRK13355 287 IINPNNPTGALYPREVLQQIVDIAREH------QLIIFSDEIYDRLVMD--GLEH-TSIASLAPDLFCVTFSGLSKSHMI 357 (517)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhhcCC--CCCc-ccHHHhCCCCeEEEEecchhhccC
Confidence 9999999999966 88999999999 9999999999875431 1011 1111 122234444 45776 56
Q ss_pred CCCCeEEEEEe
Q 017569 281 VYAGVGWVVWR 291 (369)
Q Consensus 281 ~p~g~g~l~~~ 291 (369)
.++.+|++++.
T Consensus 358 ~G~RiG~~i~~ 368 (517)
T PRK13355 358 AGYRIGWMILS 368 (517)
T ss_pred cccceEEEEee
Confidence 78899999874
No 75
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=4.7e-19 Score=174.04 Aligned_cols=254 Identities=11% Similarity=-0.002 Sum_probs=166.3
Q ss_pred CChHHHHHHHHHHhccC-C-CCCC-----CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKN-Y-VDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n-~-~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
++++.+.+++..++... . +.+. .......+|+.+++++++++|++.. .++.++|++|+..++.++..
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~------~i~~~sgt~al~~~l~~l~~ 109 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYA------NVQPHSGSQANAAVYFALLK 109 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce------eeecCCchHHHHHHHHHhcC
Confidence 35677888876664321 1 1111 1123556777678899999999852 24444678899887777643
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHH---H--HhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCC
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---F--ARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGST 213 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~---~--~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~ 213 (369)
+ +++|+++.++|.++.. . ....|++++.++++.+++.+|+++|++++++ +|++|+++. +
T Consensus 110 ~-------------gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~--~ 174 (416)
T PRK00011 110 P-------------GDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGA--S 174 (416)
T ss_pred C-------------CCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECC--C
Confidence 2 4689999999875421 1 1234677888888754589999999999975 788887654 3
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
.+|...|+++|+++|+++ ++++++|+||+.+... ....+..+. ++|.++.++|||+.+|.| |++++.++
T Consensus 175 ~~~~~~~~~~I~~la~~~------~~~livD~a~~~g~~~--~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~ 243 (416)
T PRK00011 175 AYSRPIDFKRFREIADEV------GAYLMVDMAHIAGLVA--AGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDE 243 (416)
T ss_pred cCCCccCHHHHHHHHHHc------CCEEEEECcchhcccc--cCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCH
Confidence 456778999999999999 9999999998654331 111122232 789999999999876665 66766543
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.. ..+.. ..+.+ ..++......++++.++.....+++.++ +..++++++++.|++.|+
T Consensus 244 ~~~-~~l~~-~~~~~-------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 304 (416)
T PRK00011 244 ELA-KKINS-AVFPG-------IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF 304 (416)
T ss_pred HHH-HHHHH-HhCcc-------ccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 332 22211 11110 0122223334555555555555676666 899999999999999874
No 76
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.84 E-value=3.6e-19 Score=173.48 Aligned_cols=262 Identities=13% Similarity=-0.009 Sum_probs=173.3
Q ss_pred CCCCcccccccc-C-CChHHHHHHHHHHhccCCCCCCCCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 54 GNPRLNLASFVT-T-WMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 54 ~~p~~~l~~~~~-~-~~~~~v~~~~~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
+...++|+++.+ + +.+|.+.+++.+++......+..+. +...+..++++.+++++|.+. .++++||++
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~-------~ii~~~~~~ 109 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED-------TILYASCFD 109 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEECchHH
Confidence 333355555442 2 3357788887777765322333333 545555667777999999864 688889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------c
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------N 202 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~ 202 (369)
|+..++.++.++ ++.|++++++|+++...++..+.....++ .+|+++|++++++ +
T Consensus 110 a~~~~~~~l~~~-------------gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 110 ANGGLFETLLGA-------------EDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred HHHHHHHHhCCC-------------CCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCC
Confidence 998777665331 47899999999999998888877654332 3688999998875 6
Q ss_pred CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc--cccccCCCCcEEEEcCccCCC
Q 017569 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+++|++...+|++|.+.|+++|+++|+++ ++++++|++|+.+..+...... ..+. ...+|.++.++||+++
T Consensus 171 ~~~v~~~~v~~~tG~~~~l~~i~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~-~~~~di~~~s~sK~l~ 243 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAPLDEICDLADKY------DALVMVDECHATGFLGPTGRGSHELCGV-MGRVDIITGTLGKALG 243 (393)
T ss_pred ceEEEEeCCccCCCCcCCHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchHHhcCC-CCCCeEEEEEChHHhh
Confidence 78888888899999999999999999999 9999999999654431100000 0111 2368999999999986
Q ss_pred CCCCeEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHH
Q 017569 281 VYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVI 357 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~ 357 (369)
+ +..|+++.++ +.. ..+.. ...+ ...++.+....+++..+++.+ ++.+++ +..++.+++.+.|+
T Consensus 244 g-~r~G~~~~~~-~~~-~~l~~~~~~~--------~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~ 310 (393)
T TIGR01822 244 G-ASGGFTTARK-EVV-ELLRQRSRPY--------LFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERME 310 (393)
T ss_pred C-CCcEEEEeCH-HHH-HHHHHhCccc--------eecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHH
Confidence 5 4568877642 222 22211 0111 112333333233445555554 233334 88899999999998
Q ss_pred hcCC
Q 017569 358 HSSY 361 (369)
Q Consensus 358 ~~g~ 361 (369)
+.|+
T Consensus 311 ~~g~ 314 (393)
T TIGR01822 311 AAGF 314 (393)
T ss_pred HcCC
Confidence 8764
No 77
>PRK07337 aminotransferase; Validated
Probab=99.84 E-value=5e-19 Score=172.32 Aligned_cols=264 Identities=14% Similarity=0.046 Sum_probs=182.2
Q ss_pred ccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|..+.+.. +++.+.+.+.+++..+...|....+..++++++.+++.+.+|.+.+. ...++|+|+++|+.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~t~G~~~al~~~~~~ 109 (388)
T PRK07337 33 IHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP---ERIVVTAGASAALLLACLA 109 (388)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HhEEEecCcHHHHHHHHHH
Confidence 4555555543 34667888887776555555556678999999999999888875422 3488999999999888877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+.++ +++|++++++|..+...++..|++++.+|+++ +++.+|+++|++.+++++++|++++|+|||
T Consensus 110 l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 176 (388)
T PRK07337 110 LVER-------------GDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPT 176 (388)
T ss_pred hcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCC
Confidence 6442 47899999999999999999999999999974 458999999999999899999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE-cCccCCC-CCCCeEEEEE
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV-SGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~-~~hK~l~-~p~g~g~l~~ 290 (369)
|.+.+ +++|+++|+++ ++++++|.+|..+.. .+. .........+.+++ +..|.++ ....+|+++.
T Consensus 177 G~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~-~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 177 GTSIAPDELRRIVEAVRAR------GGFTIVDEIYQGLSY---DAA-PVSALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred CcCcCHHHHHHHHHHHHHC------CCEEEEecccccccc---CCC-CcChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 99854 78888999999 999999999986432 111 11111112345544 6889874 5567899987
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh---hHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE---VIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~---G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+. .. ..+.....+.. .+ ...+.+++++..+... -+.+. +..+..+++.+.|++.|.
T Consensus 247 ~~~-l~-~~l~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~ 308 (388)
T PRK07337 247 PEA-LV-GTFEKLAQNLF---------IC---ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGF 308 (388)
T ss_pred CHH-HH-HHHHHHHHHhc---------cC---CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 432 21 22111001110 00 1133444444555322 23333 566677788888887764
No 78
>PRK08363 alanine aminotransferase; Validated
Probab=99.83 E-value=7.9e-19 Score=171.48 Aligned_cols=214 Identities=14% Similarity=0.024 Sum_probs=161.2
Q ss_pred cCCCCccccccccC----CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 53 ~~~p~~~l~~~~~~----~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
.+.+.++|+.+.|. ++++.+.+++.+++......|...++..++++++.+++.+.+|...+. ...++|+|+++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~ 104 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP---DDVRVTAAVTE 104 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHH
Confidence 44556777777773 345677888887775443345556788999999999888877755322 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEE-eccCCccccCHHHHHHHHhhcCcEEE
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVA 207 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~ 207 (369)
|+.+++.++.++ ++.|+++.++|..+...++.+|+.++.+ +.+++++.+|+++|++++.+++++|+
T Consensus 105 al~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 171 (398)
T PRK08363 105 ALQLIFGALLDP-------------GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIA 171 (398)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEE
Confidence 999988877442 4789999999999999999999988888 55555678999999999988899999
Q ss_pred EeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCC-CcEE-EEcCccC-CCC
Q 017569 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL-VKSI-NVSGHKY-GLV 281 (369)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~-~Dsi-~~~~hK~-l~~ 281 (369)
+++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .+.......... ...+ ..+..|+ +..
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~li~Deay~~~~~---~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 242 (398)
T PRK08363 172 VINPNNPTGALYEKKTLKEILDIAGEH------DLPVISDEIYDLMTY---EGKHVSPGSLTKDVPVIVMNGLSKVYFAT 242 (398)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CeEEEEhhhhhhhcc---CCcccCHHHcCcCCcEEEEecchhccCCc
Confidence 9999999999865 88999999999 999999999987533 111100011111 1234 3468898 667
Q ss_pred CCCeEEEEEe
Q 017569 282 YAGVGWVVWR 291 (369)
Q Consensus 282 p~g~g~l~~~ 291 (369)
+.++|++++.
T Consensus 243 GlRiG~~~~~ 252 (398)
T PRK08363 243 GWRLGYIYFV 252 (398)
T ss_pred cceEEEEEEe
Confidence 7899999983
No 79
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.8e-19 Score=174.48 Aligned_cols=220 Identities=14% Similarity=0.014 Sum_probs=161.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|....||+. ++++.|.+. +++++||++|+..++.++..+ +++|+++.+.|......
T Consensus 53 pt~~~Le~~----lA~leg~e~-------ivvt~gg~~Ai~~~l~all~~-------------Gd~Il~~~~~y~~~~~~ 108 (388)
T PRK08861 53 PNRGLLEQT----LSELESGKG-------AVVTNCGTSALNLWVSALLGP-------------DDLIVAPHDCYGGTYRL 108 (388)
T ss_pred chHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCchHHHHHH
Confidence 456666666 888988754 899999999999998887432 47899999988754332
Q ss_pred ----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 ----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
....|+++++++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 109 ~~~~~~~~gi~v~~vd~------~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~vIvDea 176 (388)
T PRK08861 109 FNTRANKGDFKVQFVDQ------SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAV------GALVAVDNT 176 (388)
T ss_pred HHHHHhcCCeEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 2234666666642 378999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|..+.. .. +.+ .++|.++.|+|||+++|.+ .|+++.++++.. +.+.....+.+ ....
T Consensus 177 ~~~~~~--~~---pl~---~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~-~~~~~~~~~~G------------~~~~ 235 (388)
T PRK08861 177 FLTPVL--QK---PLE---LGADFVIHSTTKYINGHSDVIGGVLITKTKEHA-EELAWWGNCIG------------ATGT 235 (388)
T ss_pred cccccc--CC---Ccc---cCCCEEEeecceeccCCCcceeEEEEecHHHHH-HHHHHHHhccC------------CCCC
Confidence 986543 11 122 3799999999999998876 577766554322 11111001111 1223
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+...|..++.+..-.++-.++.++|..++++|++++.+++-+|
T Consensus 236 p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~y 278 (388)
T PRK08861 236 PFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYH 278 (388)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEEC
Confidence 6678877777765555433999999999999999998876544
No 80
>PRK07324 transaminase; Validated
Probab=99.83 E-value=4.7e-19 Score=171.56 Aligned_cols=221 Identities=13% Similarity=0.019 Sum_probs=158.4
Q ss_pred HHHHHHHHHHhhh--hcCCCCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 017569 39 KEAAYQVINDELM--LDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADD 115 (369)
Q Consensus 39 ~~~i~~~l~~~~~--~~~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~ 115 (369)
.++.++....... +.++...+++.+.+... ++.+ +++.++++.....|....+..+|++++.+++. +.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~--- 80 (373)
T PRK07324 8 VEEWLNVYEKSATYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKP--- 80 (373)
T ss_pred HHHHHHHhhccCccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCCh---
Confidence 4444444433332 23445555555555433 2345 77777777766677766788888888555543 3443
Q ss_pred CCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHH
Q 017569 116 KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVK 194 (369)
Q Consensus 116 ~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~ 194 (369)
..+++|+|+++|+.+++.++.++ +++|+++.|+|..+...++..|++++.+|+++ +++.+|+++
T Consensus 81 --~~vi~t~G~~~al~~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~ 145 (373)
T PRK07324 81 --ENILQTNGATGANFLVLYALVEP-------------GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDE 145 (373)
T ss_pred --hhEEEcCChHHHHHHHHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 34899999999999998887542 46899999999999999999999999999975 447899999
Q ss_pred HHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEE
Q 017569 195 AVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 195 L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi 271 (369)
|++++++++++|++++|+||||.+-+ +++|+++|+++ ++++++|++|...... +....-.....-...
T Consensus 146 l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~------~~~ii~De~y~~l~~~---~~~~s~~~~~~~~I~ 216 (373)
T PRK07324 146 LRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSV------DAYVLSDEVYRPLDED---GSTPSIADLYEKGIS 216 (373)
T ss_pred HHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CCCCChhhccCCEEE
Confidence 99999999999999999999999977 89999999999 9999999999874431 111101111111123
Q ss_pred EEcCccCCC-CCCCeEEEEE
Q 017569 272 NVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 272 ~~~~hK~l~-~p~g~g~l~~ 290 (369)
..+..|.++ .+++.|+++.
T Consensus 217 ~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 217 TNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred EecchhhcCCccceeEEEec
Confidence 346789765 5678899987
No 81
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.83 E-value=1.5e-19 Score=175.36 Aligned_cols=254 Identities=9% Similarity=-0.031 Sum_probs=175.4
Q ss_pred cCCChHH-HHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeC-CchHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQ 142 (369)
Q Consensus 65 ~~~~~~~-v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-Ggt~a~~~al~~~~~~~~ 142 (369)
|+..++. +.+++...+-.+. ..++...++.+++++.+++++|++.+ ...++++ +||+++..++..+...
T Consensus 20 p~~~~~~~v~~a~~~~~~~~~---hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~~~~gs~T~~~~~~~~~l~~~-- 90 (378)
T PRK03080 20 PCKKRPGWQLEALADALLGRS---HRQKPVKALLKRVIEGTRELLSLPEG----YEVGIVPGSDTGAWEMALWSLLGA-- 90 (378)
T ss_pred CcCCChHHHHHHHHhhhcccC---cCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchHHHHHHHHHhcCCC--
Confidence 3444455 7777765432211 12345678888999999999999642 2367675 8999998888776320
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHH--HHhhhcc-eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCC
Q 017569 143 QKRKEQGKPYDKPNIVTGANVQVCWEK--FARYFEV-ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 143 ~~~~~~g~~~~~~~Vi~s~~~h~s~~~--~~~~~G~-~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (369)
++..|+. ...|.+-.. +++.+|+ +++.++.+.+ ..+|+++++ . ++.|.+++.+|.||.+.
T Consensus 91 ----------~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g-~~~d~~~i~----~-~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 91 ----------RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG-SLPDLSAVD----F-DRDVVFTWNGTTTGVRV 153 (378)
T ss_pred ----------CcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC-CCCCHhhcC----C-CCCEEEEecCCccceec
Confidence 1234554 446655333 3466799 9999988753 678877743 2 56789999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
|+++|++ +++ +++++||++++.+.. +++++ .+|.+..++|||+++|+|.|+++++++. +...
T Consensus 154 pi~~I~~--~~~------g~~~vVDa~qs~G~~-------pidv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~~-~~~~ 215 (378)
T PRK03080 154 PVARWIG--ADR------EGLTICDATSAAFAL-------PLDWS--KLDVYTFSWQKVLGGEGGHGMAILSPRA-VERL 215 (378)
T ss_pred cchhhcc--ccC------CCeEEEecccccccC-------CCCHH--HCcEEEEehhhhCCCCCceEEEEECHHH-HHhh
Confidence 9999999 778 999999999998766 24443 4799999999999999999999998642 2110
Q ss_pred ccccc-----CccC--C----CC--CCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 300 LVFHI-----NYLG--S----DQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 300 ~~~~~-----~y~~--~----~~--~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
..... .|.. . .. .+....+|.+.....++..+|+.+..+ |++.+ |+.+++++++++|+++|.+
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~ 294 (378)
T PRK03080 216 ESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWA 294 (378)
T ss_pred hcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 00001 1110 0 00 011112345555556667899999887 89888 9999999999999998854
No 82
>PLN02721 threonine aldolase
Probab=99.83 E-value=2.8e-19 Score=171.56 Aligned_cols=200 Identities=14% Similarity=0.072 Sum_probs=137.6
Q ss_pred ccccccCCChHHHHHHHHHH-hccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMAS-INKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~-~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (369)
|++..++.+.+.+.+++... .+.... ...+...++|++ +++++|.+. ++++++|+++++.++.+..
T Consensus 10 ~~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~l~~~----la~~~~~~~-------~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 10 LRSDTVTKPTDAMRAAMANAEVDDDVL--GYDPTALRLEEE----MAKIFGKEA-------ALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhcccccCCCHHHHHHHHhccCCCccc--CCCHHHHHHHHH----HHHHhCCce-------eEEecCccHHHHHHHHHHc
Confidence 34444444556677776653 222222 224445566655 788888764 6888888999887777754
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHH---HHhhhcceeEEEeccCCccccCHHHHHHHHh-------hcCcEEEE
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVD-------ENTICVAA 208 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~~~~v~~ 208 (369)
.. .+++|++++++|+++.+ .+...|++++.+|.+++ +.+|+++|+++++ +++++|++
T Consensus 77 ~~------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 77 DV------------RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred cC------------CCCeEEEcCccceehhcccchhhhcCceeEecCCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 31 14789999999987665 56778999999998764 8899999999998 57888888
Q ss_pred ee-CCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC
Q 017569 209 IL-GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (369)
Q Consensus 209 ~~-~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g 284 (369)
+. ++||+|.+.| +++|.++|+++ |+++|+|+||..+... ... ...+-...++|++++++|||+.+|.|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~------g~~livD~a~~~~~~~-~~~-~~~~~~~~~~d~~~~s~sK~l~~~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRH------GLKLHIDGARIFNASV-ALG-VPVHRLVKAADSVSVCLSKGLGAPVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHc------CCEEEEEchhhhcchh-hhC-CCHHHHhhhCCEEEEecccccCCcee
Confidence 66 5677888744 88999999999 9999999987532210 011 11111134789999999999986644
Q ss_pred eEEEEEeCCCC
Q 017569 285 VGWVVWRTKDD 295 (369)
Q Consensus 285 ~g~l~~~~~~~ 295 (369)
++++.+++.
T Consensus 216 --~~~~~~~~~ 224 (353)
T PLN02721 216 --SVIVGSKSF 224 (353)
T ss_pred --eEEecCHHH
Confidence 344444433
No 83
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.8e-18 Score=168.63 Aligned_cols=266 Identities=11% Similarity=0.024 Sum_probs=184.6
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
+.++|..+.+..+ ++.+.+++.++++.....|....+...+++++.+++.+.+|...+. ...++|+|+++|+..++
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~~~g~~~a~~~~~ 108 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP---SQVIVTTGAKQALYNAF 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH---HHEEEeCCcHHHHHHHH
Confidence 3356666555543 4678888888776544455556688999999999998887754321 34899999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.++..+ ++.|++++++|..+..+++..|++++.+|+++ +++.+|++++++++++++++|++++|+|
T Consensus 109 ~~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~N 175 (393)
T PRK05764 109 MALLDP-------------GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSN 175 (393)
T ss_pred HHhcCC-------------CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCC
Confidence 876442 46899999999999999999999999999974 3578999999999988899999999999
Q ss_pred CcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCC--ccccc--cCCCCcEEEEcCccCCC-CCCCe
Q 017569 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD--LEWDF--RLPLVKSINVSGHKYGL-VYAGV 285 (369)
Q Consensus 214 ~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~--~~~~~--~~~~~Dsi~~~~hK~l~-~p~g~ 285 (369)
|||.+- ++++|+++|+++ ++|+++|.+|+.+... .+. ....+ ....-+.+..+..|.++ ...++
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEH------DIWVLSDEIYEKLVYD--GAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHC------CcEEEEeccccceeeC--CCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 999984 588999999999 9999999999865431 111 00111 12234566667889975 33457
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--HhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|+++.. ++.. ..+.. +... . +- ....+.++++.+.+. .+-+.++ +..++.+++++.|++.
T Consensus 248 G~i~~~-~~~~-~~~~~---~~~~----~----~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 248 GYAAGP-KELI-KAMSK---LQSH----S----TS-NPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred EEEecC-HHHH-HHHHH---HHhh----c----cc-CCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 888753 3222 22211 0000 0 00 112345555555553 2334444 6677888899999887
No 84
>PRK08960 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-18 Score=169.67 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=160.2
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|..+.+.+ +++.+.+++.+++..+...|....+..++++++.+++.+.+|.+.+. ..+++|+|+++++.+++
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~al~~~~ 109 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP---ERILVTPGGSGALLLAS 109 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccCcHHHHHHHH
Confidence 345666666663 46778888888886554556566788999999999998887765422 35899999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.++.++ ++.|++++++|+.+...++..|.+++.+|++++ ++.+|++++++++++++++++++.|+|
T Consensus 110 ~~~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~N 176 (387)
T PRK08960 110 SLLVDP-------------GKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPAN 176 (387)
T ss_pred HHhcCC-------------CCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCC
Confidence 776442 478999999999999999999999999999753 478999999999998899999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcE-EEEcCccCCC-CCCCeEEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS-INVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds-i~~~~hK~l~-~p~g~g~l 288 (369)
|||.+.+ +++|+++|+++ ++++++|++|..+.. .+.....+... -+. +..+.+|.++ ....+|++
T Consensus 177 PtG~~~~~~~~~~l~~~~~~~------~~~li~De~Y~~~~~---~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 177 PTGTLLSRDELAALSQALRAR------GGHLVVDEIYHGLTY---GVDAASVLEVD-DDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CCEEEEEcccccccc---CCCCCChhhcc-CCEEEEeecccccCCcccEEEEE
Confidence 9999866 56677788999 999999999987433 11111111121 233 4456889874 56679999
Q ss_pred EEe
Q 017569 289 VWR 291 (369)
Q Consensus 289 ~~~ 291 (369)
+..
T Consensus 247 ~~~ 249 (387)
T PRK08960 247 VAP 249 (387)
T ss_pred EcC
Confidence 874
No 85
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2e-18 Score=169.00 Aligned_cols=213 Identities=13% Similarity=0.066 Sum_probs=159.0
Q ss_pred CCccccccccC--CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 56 PRLNLASFVTT--WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 56 p~~~l~~~~~~--~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
+.++|..+.+. ++++.+.+.+.++++.. ...|....+..++++++++|+++.+|.+.+. ...+++|+|+++++.+
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~--~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA--ADELIITPGTQGALFL 117 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCcHHHHHH
Confidence 33566655555 24466777777776543 3445556788999999999999999975421 1358999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC----CccccCHHHHHHHHhhcCcEEEE
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE----GYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~----~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
++.++.++ ++.|++++|+|+.+...++.+|++++.|+++. +++.+|+++|++++++++++|++
T Consensus 118 ~~~~l~~~-------------Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l 184 (405)
T PRK06207 118 AVAATVAR-------------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLF 184 (405)
T ss_pred HHHHhcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEE
Confidence 88887542 47899999999999999999999999999862 24789999999999888999999
Q ss_pred eeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-cc-cccCCCCc-EEEEcCccCCC-C
Q 017569 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFRLPLVK-SINVSGHKYGL-V 281 (369)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~~~~~~D-si~~~~hK~l~-~ 281 (369)
++|+||||.+.+ +++|+++|+++ ++++++|++|+.+... .... .. .+....-. .++.++.|.++ .
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~~a~~~------~~~iI~De~Y~~~~~~--~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp 256 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAALARRY------GATVIVDQLYSRLLYD--GTSYTHLRALPIDPENVITIMGPSKTESLS 256 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccccccC--CCCCCchhcCCCCcCcEEEEecchhhccCc
Confidence 999999999965 77889999999 9999999999875431 1110 00 11111112 34455788876 5
Q ss_pred CCCeEEEEEe
Q 017569 282 YAGVGWVVWR 291 (369)
Q Consensus 282 p~g~g~l~~~ 291 (369)
+..+|+++..
T Consensus 257 GlRiG~ii~~ 266 (405)
T PRK06207 257 GYRLGVAFGS 266 (405)
T ss_pred ccceEEEEcC
Confidence 6779999753
No 86
>PRK08912 hypothetical protein; Provisional
Probab=99.83 E-value=1.4e-18 Score=169.04 Aligned_cols=214 Identities=14% Similarity=0.012 Sum_probs=159.7
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+.+.|..+ ++.+.+.+.+.+......|....+..++++++.+++.+.+|.+.+. ...+++|+|+++++..++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~ 104 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDP--ETEVMVTSGATEALAAAL 104 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--cccEEEeCCcHHHHHHHH
Confidence 3356666555433 4556666666554444455556688999999999999888876422 125899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.++.++ ++.|+++.++|..+...++..|++++.+|++++++.+|+++|++.+.+++++|++++|+||
T Consensus 105 ~~~~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NP 171 (387)
T PRK08912 105 LALVEP-------------GDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNP 171 (387)
T ss_pred HHhcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCC
Confidence 776432 4689999999999999999999999999997645899999999999888999999999999
Q ss_pred cccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 215 tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
||.+.+ +++|.++|+++ ++++++|.+|+.+...- .+..+ ..+. ...-+.+..+..|.++ ....+|++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~------~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRH------DAVAICDEVWEHVVFDG-RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred cCcccCHHHHHHHHHHHHHC------CeEEEEhhhhhhcccCC-CCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 999865 77799999999 99999999998644310 01001 1111 1234567778999876 45678999
Q ss_pred EEe
Q 017569 289 VWR 291 (369)
Q Consensus 289 ~~~ 291 (369)
+..
T Consensus 245 ~~~ 247 (387)
T PRK08912 245 CAA 247 (387)
T ss_pred ecC
Confidence 874
No 87
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.82 E-value=4.4e-18 Score=166.31 Aligned_cols=269 Identities=9% Similarity=-0.018 Sum_probs=181.5
Q ss_pred CCCccccccccC-CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 55 NPRLNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 55 ~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
+..++|+.+.+. ++++.+.+.+.++++.. ...|. ..+..++++++.+++.+..|.+.+. ...+++|+|+++++.+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al~~ 108 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA--DKEVLLLMGSQDGLVH 108 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCcHHHHHH
Confidence 344556555554 33566788888777542 22222 3688899999999999888876421 1358899999999988
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++.++ ++.|++++|+|+.+...++.+|++++.+|++++ ++.+|++++++++.+++++|++++|
T Consensus 109 ~~~~~~~~-------------Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P 175 (399)
T PRK07681 109 LPMVYANP-------------GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFP 175 (399)
T ss_pred HHHHhCCC-------------CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCC
Confidence 88776542 478999999999999999999999999999753 4789999999999888999999999
Q ss_pred CCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCC---CCcEEEEcCccCCC-CCCC
Q 017569 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP---LVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 212 ~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~---~~Dsi~~~~hK~l~-~p~g 284 (369)
+||||.+.+ +++|+++|+++ ++++++|.+|+.+... ........... .-..+..+..|.++ .+..
T Consensus 176 ~NPTG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 247 (399)
T PRK07681 176 GNPVPAMAHEDFFKEVIAFAKKH------NIIVVHDFAYAEFYFD--GNKPISFLSVPGAKEVGVEINSLSKSYSLAGSR 247 (399)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhheeC--CCCCCChhhCCCCcccEEEEeecccccCCccce
Confidence 999999966 78899999999 9999999999875531 11100111111 11233446889874 5677
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+|+++.. ++.. ..+.....+. . .+- ..+.++++...+ +.+-+++. +..++.+++.+.|++.|
T Consensus 248 iG~~i~~-~~l~-~~~~~~~~~~-----~----~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 313 (399)
T PRK07681 248 IGYMIGN-EEIV-RALTQFKSNT-----D----YGV---FLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG 313 (399)
T ss_pred eEEEecC-HHHH-HHHHHHHhhc-----c----cCC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999863 3232 2221100000 0 011 123344444444 22223333 56677778888998876
Q ss_pred C
Q 017569 361 Y 361 (369)
Q Consensus 361 ~ 361 (369)
+
T Consensus 314 ~ 314 (399)
T PRK07681 314 W 314 (399)
T ss_pred C
Confidence 3
No 88
>PRK07682 hypothetical protein; Validated
Probab=99.82 E-value=1.2e-18 Score=169.04 Aligned_cols=268 Identities=11% Similarity=0.052 Sum_probs=185.0
Q ss_pred CccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+.+.+... ++.+.+++.+.+......|...++..++++++.+++.+.+|.+.+. ...+++|+|+++|+.+++.
T Consensus 22 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 22 VISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP--NDEIIVTVGASQALDVAMR 99 (378)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHH
Confidence 355555555433 3456777777665444556556789999999999999988875421 1248999999999998887
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
++.++ ++.|++++++|..+...++..|..++.++++. +++.+|+++|++++.+++++|+++.|+||
T Consensus 100 ~l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NP 166 (378)
T PRK07682 100 AIINP-------------GDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNP 166 (378)
T ss_pred HhCCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCC
Confidence 76542 47899999999999999999999999998863 35899999999999888999999999999
Q ss_pred cccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 215 tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
||.+. ++++|.++|+++ ++++++|++|+.+... .+... ..+. ...-..+..+..|.++ .+.++|++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 238 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKH------DLIVLSDEIYAELTYD--EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFI 238 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhcccC--CCCCChhhcccccCCEEEEecCcccccChhhhhhhh
Confidence 99985 488999999999 9999999999976531 11000 0111 1122355566889986 45678999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+..+ +.. +.+.....+. . . +...+.+.++...+ |..-++++ +..+..+++.+.|++.|+
T Consensus 239 ~~~~-~~i-~~l~~~~~~~-----~----~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 301 (378)
T PRK07682 239 AAPV-YFS-EAMLKIHQYS-----M----M---CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL 301 (378)
T ss_pred hcCH-HHH-HHHHHHHHhh-----c----c---CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8743 222 2221111110 0 0 11234444455555 22334444 677888899999988764
No 89
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.7e-18 Score=167.52 Aligned_cols=272 Identities=10% Similarity=-0.013 Sum_probs=176.8
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 54 GNPRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 54 ~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
++..++|+.+.|..+ ++.+.+.+.+.+.. ....|....+..+|++++.+|+.+.+|.+.+. +..+++|+|+++++.
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~~i~vt~G~~~al~ 111 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDP--DSEALPLLGSKEGLT 111 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCC--CCeEEEccChHHHHH
Confidence 333445555445432 34455555555432 23445555678899999999999888865421 113778999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEee
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.++.++ +++|++++|+|..+...+...|++++.+|++. +++.+|++++++++++++++|++++
T Consensus 112 ~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 178 (394)
T PRK05942 112 HLALAYVNP-------------GDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNY 178 (394)
T ss_pred HHHHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcC
Confidence 888776442 47899999999999888889999999999974 3478999999999988999999999
Q ss_pred CCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCC-CCCCCe
Q 017569 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAGV 285 (369)
Q Consensus 211 ~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l-~~p~g~ 285 (369)
|+||||.+.+ +++|.++|+++ ++++++|++|+.+...-........+. .........+..|.+ ..+.++
T Consensus 179 P~NPtG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRi 252 (394)
T PRK05942 179 PSNPTTATAPREFFEEIVAFARKY------EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRV 252 (394)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHc------CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhhe
Confidence 9999999976 88899999999 999999999986543100000001111 112223344567965 566789
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
|+++.. ++.. +.+.....+.. .+.+. +.+.++...+ ..+.+++. +..++.+++.+.|++.|
T Consensus 253 G~i~~~-~~l~-~~l~~~~~~~~---------~~~~~---~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 317 (394)
T PRK05942 253 GFVVGN-RHII-QGLRTLKTNLD---------YGIFS---ALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELG 317 (394)
T ss_pred eeeecC-HHHH-HHHHHHHhhcc---------cCCCH---HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999863 2222 22211111100 11111 2222222222 23444444 66777788888888765
No 90
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=7.6e-19 Score=170.01 Aligned_cols=220 Identities=16% Similarity=0.042 Sum_probs=160.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|....||+. ++++.|... .++++||++|+..++.++.++ +++|+++++.|..+..
T Consensus 60 npt~~~Le~~----iA~le~~~~-------~~~~~sG~~Ai~~~l~all~~-------------GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGAG-------TALYPSGAAAISNALLSFLKA-------------GDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHH
Confidence 3555677766 777777653 789999999999988877542 4789999988866554
Q ss_pred H----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
. +..+|++++.++.+ |.+.++++++++|++|++++|+||+|.+.|+++|+++|+++ +++++||+
T Consensus 116 l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~------g~~lvvD~ 183 (394)
T PRK09028 116 LCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEH------DIVVMLDN 183 (394)
T ss_pred HHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34568887776532 45789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. ..| . ..++|.+..|+|||++++.+. |++ +.+++.. ..+....... |. ..
T Consensus 184 t~a~p~~--~~P---l---~~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~-~~l~~~~~~~----------G~--~~ 241 (394)
T PRK09028 184 TWASPIN--SRP---F---EMGVDISIQAATKYIVGHSDVMLGTA-TANEKHW-DQLREHSYLM----------GQ--CT 241 (394)
T ss_pred Ccccccc--CCc---c---ccCceEEEEeCCeEecCCCCEEEEEE-ECCHHHH-HHHHHHHHhc----------CC--CC
Confidence 9986432 222 2 238999999999999888543 544 4443221 1111111111 11 23
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
.+...|..++.+..-.++-.++.++|..++++|++++.+++-+|
T Consensus 242 ~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~y 285 (394)
T PRK09028 242 SPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRH 285 (394)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEEC
Confidence 46788888877766555533999999999999999998877554
No 91
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.82 E-value=2.3e-18 Score=165.44 Aligned_cols=199 Identities=18% Similarity=0.093 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
++.+.+++.+... ....|....+..+|++++.+++.+..|.+.+. ...+++|+|+++++..++.++.+.
T Consensus 15 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~Iiit~Gs~~ai~~~~~~~~~~-------- 83 (350)
T TIGR03537 15 PPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP--DAQVLPSAGSKEAIFHFPLVFIDP-------- 83 (350)
T ss_pred CHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHHHHHHHHHHcCC--------
Confidence 5667777776654 34445555678899999999999888865421 125899999999998888776542
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLL 224 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I 224 (369)
| ..++.|+++.++|..+..+++..|++++.+|++ ++++.+|++++++++.+++++++++.|+||||.+.+ +++|
T Consensus 84 g--~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l 161 (350)
T TIGR03537 84 E--EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKET 161 (350)
T ss_pred C--CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHH
Confidence 1 123589999999999999999999999999997 445789999999999989999999999999999877 8899
Q ss_pred HHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CC-CCcEEEEcCccCC-CCCCCeEEEEE
Q 017569 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP-LVKSINVSGHKYG-LVYAGVGWVVW 290 (369)
Q Consensus 225 ~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~-~~Dsi~~~~hK~l-~~p~g~g~l~~ 290 (369)
+++|+++ ++++++|++|+.+... .+ ...+. .. .-..+..+..|.+ ......|+++.
T Consensus 162 ~~~a~~~------~~~ii~De~y~~~~~~--~~--~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 162 IAMCREH------GIILCSDECYTEIYFG--EP--PHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred HHHHHHc------CcEEEEeccccccccC--CC--CCchhhcCcCCEEEEeecccccCCccccceeeec
Confidence 9999999 9999999999864331 11 11111 11 1113344688986 44567888864
No 92
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.7e-18 Score=168.51 Aligned_cols=231 Identities=15% Similarity=0.061 Sum_probs=157.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|...++|++ ++++.|.+. .++|++|++|+.+++.++..+ +++||++...|.+....
T Consensus 64 p~~~~le~~----lA~l~g~~~-------av~~sSGt~Al~~al~~ll~~-------------Gd~Vi~~~~~y~~t~~~ 119 (433)
T PRK08134 64 PTVAVLEER----VAALEGGVG-------AIATASGQAALHLAIATLMGA-------------GSHIVASSALYGGSHNL 119 (433)
T ss_pred hHHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCccHHHHHH
Confidence 455556555 899999875 699999999999988876331 46899999888765443
Q ss_pred H----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ ...|+++++++++ |+++|+++|+++|++|++.+++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 120 ~~~~l~~~Gi~v~~vd~~------d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~------gi~livD~t 187 (433)
T PRK08134 120 LHYTLRRFGIETTFVKPG------DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEA------GVPLLVDST 187 (433)
T ss_pred HHHHHhhCCeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 3 4479999888864 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCc-ccc--cc-cccCccCC--C-CC-C----
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDL-PDE--LV-FHINYLGS--D-QP-T---- 313 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~-~~~--~~-~~~~y~~~--~-~~-~---- 313 (369)
++.+.. . ..+ ..++|.++.|+|||++++.. .|.+++...... ... +. ....+.+. . .. +
T Consensus 188 ~a~~~~---~----~pl-~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 259 (433)
T PRK08134 188 FTTPYL---L----RPF-EHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVA 259 (433)
T ss_pred Cccccc---C----Cch-hcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchh
Confidence 876443 1 111 24899999999999966543 445554322111 000 00 00111000 0 00 0
Q ss_pred -cc--c--cCCc---chhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 314 -FT--L--NFSK---GSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 314 -~~--l--~~tr---~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+. . .+++ .......+|..++.+.. +..+ +..++|..+++.|++++.+++-+|
T Consensus 260 ~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~t--l~~R~~~~~~nA~~la~~L~~~p~V~~V~y 321 (433)
T PRK08134 260 AFLLRARREGLRDFGACLSPMNAWQLLQGIET--LPLRMERHVANTRKVVAFLASHPAVARVAH 321 (433)
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCc--HHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 00 0 0000 11234556655555543 4444 999999999999999998876543
No 93
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.82 E-value=1.1e-18 Score=170.40 Aligned_cols=253 Identities=13% Similarity=0.047 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
..+.+...+++..+...|..+++..+||++ +++++|.+. +++|+||++|+.+++.++.++
T Consensus 32 ~ams~~~~~a~~~gd~~Y~~~~g~~~Leea----ia~~~g~~~-------vv~t~~Gt~Al~la~~al~~p--------- 91 (431)
T cd00617 32 GAMSDYQWAAMMLGDEAYAGSKSFYDLEDA----VQDLFGFKH-------IIPTHQGRGAENILFSILLKP--------- 91 (431)
T ss_pred HHHHHHHHHHHHhCCCccCCCCCHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHHhCCC---------
Confidence 455666666665544557778899999988 677778875 899999999999998887542
Q ss_pred CCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC---------ccccCHHHHHHHHhhc----CcEEEEeeCCCCc-
Q 017569 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDEN----TICVAAILGSTLT- 215 (369)
Q Consensus 150 ~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~----~~~v~~~~~~~~t- 215 (369)
+++| ++++.+.++...+.+.|+.++.+++++. ++.+|+++|+++|+++ +++|+++.++|++
T Consensus 92 ----GD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~g 166 (431)
T cd00617 92 ----GRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAG 166 (431)
T ss_pred ----CCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCC
Confidence 3555 6887788888888999999999999742 2459999999999875 7889999999998
Q ss_pred ccCC---CHHHHHHHHHHhhhccCCCceEEeeccccccccccc-------CCCccccc--c-CCCCcEEEEcCccCCCCC
Q 017569 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-------YPDLEWDF--R-LPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 216 G~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~-------~~~~~~~~--~-~~~~Dsi~~~~hK~l~~p 282 (369)
|.+- ++++|.++|+++ ++++|.|+|......-|. ......++ . ....|++++++||-+.+|
T Consensus 167 G~~~s~~~l~~i~eia~~~------gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~ 240 (431)
T cd00617 167 GQPVSMANLREVRELAHKY------GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN 240 (431)
T ss_pred CccCCHHHHHHHHHHHHHc------CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc
Confidence 7774 567889999999 999999999543211111 01000011 1 236899999999998887
Q ss_pred CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.| |+++.+++++... +.... +......++ |.-++....++..+|..... .+.+ +..+..++|.++|++.|+
T Consensus 241 ~G-G~i~~~d~~l~~~-~~~~~-~~~~~~~~~---gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L~~~G~ 312 (431)
T cd00617 241 IG-GFLALRDDELYEE-ARQRV-VLYEGFVTY---GGMAGRDMEALAQGLREAVE--EDYLRHRVEQVRYLGDRLDEAGV 312 (431)
T ss_pred cc-eEEEeCcHHHHHH-HHHhc-cccCCcccc---ccccHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHCCC
Confidence 74 6787776434322 21100 100000111 22233333333334433211 2334 566677999999999875
No 94
>PLN02187 rooty/superroot1
Probab=99.82 E-value=3.6e-18 Score=169.61 Aligned_cols=273 Identities=12% Similarity=0.050 Sum_probs=186.1
Q ss_pred CCCccccccccC----C-ChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 55 NPRLNLASFVTT----W-MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 55 ~p~~~l~~~~~~----~-~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
.+.++|+.+.|. + +++.+.+.+.+++..+. ..|....+..++++++.+++.+.+|.+.+. ..+++|+|+++
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~---~~I~it~G~~~ 142 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP---EDIFLTAGCNQ 142 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCHHH
Confidence 344567766554 2 23567777777776543 345566788999999999998877765422 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEE
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVA 207 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~ 207 (369)
++.+++.++.++ ++.|+++.|+|+.+...++..|++++.+++.+ +++.+|+++|++++++++++++
T Consensus 143 al~~~~~~l~~p-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~ 209 (462)
T PLN02187 143 GIEIVFESLARP-------------NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMV 209 (462)
T ss_pred HHHHHHHHhcCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEE
Confidence 999998887542 47899999999999999999999999999853 4589999999999988999999
Q ss_pred EeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CC-CCcEEEE-cCccC-CC
Q 017569 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP-LVKSINV-SGHKY-GL 280 (369)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~-~~Dsi~~-~~hK~-l~ 280 (369)
+++|+||||.+-+ +++|+++|+++ ++++++|++|+.+.+. .+.. ..+. .. ....+++ +.-|. +.
T Consensus 210 i~nP~NPTG~v~s~e~l~~i~~~a~~~------~i~iI~DE~Y~~l~f~--~~~~-~s~~~~~~~~~vi~l~SfSK~f~~ 280 (462)
T PLN02187 210 VINPNNPCGNVYSHDHLKKVAETARKL------GIMVISDEVYDRTIFG--DNPF-VSMGKFASIVPVLTLAGISKGWVV 280 (462)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHHC------CCEEEEeccccccccC--CCCc-eeHHHhccCCcEEEEecchhhcCC
Confidence 9999999999855 88899999999 9999999999875531 1111 0111 11 1124444 46777 77
Q ss_pred CCCCeEEEEEeCCCCcc---cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--H-hhHHHH--HhhHHHHHH
Q 017569 281 VYAGVGWVVWRTKDDLP---DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--F-EVIPSF--CCVDHKKLS 352 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~---~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~-~G~~~~--~~~~~a~~l 352 (369)
.++.+|+++..+++... ..+..-..+. + +.... ..+.++++...+. . +=+++. ...+..+++
T Consensus 281 pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~-----~--~~~~~---s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l 350 (462)
T PLN02187 281 PGWKIGWIALNDPEGVFETTKVLQSIKQNL-----D--VTPDP---ATIIQAALPAILEKADKNFFAKKNKILKHNVDLV 350 (462)
T ss_pred ccceeEEEEecCchhHHHHHHHHHHHHHhc-----c--ccCCC---CHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 78999999985432210 1111100000 0 00000 1334444444442 2 223433 667777889
Q ss_pred HHHHHhcCCC
Q 017569 353 SFFVIHSSYF 362 (369)
Q Consensus 353 ~~~L~~~g~~ 362 (369)
.+.|++.+.+
T Consensus 351 ~~~L~~~~~~ 360 (462)
T PLN02187 351 CDRLKDIPCV 360 (462)
T ss_pred HHHHhhCCCC
Confidence 9999887643
No 95
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=3.1e-18 Score=169.71 Aligned_cols=264 Identities=11% Similarity=-0.005 Sum_probs=174.1
Q ss_pred CChHHHHHHHHHHh-ccCCCCC------CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe-EEeCCchHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASI-NKNYVDM------DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG-VGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 67 ~~~~~v~~~~~~~~-~~n~~~~------~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~t~Ggt~a~~~al~~~~ 138 (369)
..++.+.+++.+.+ +.....+ .......++|+.+.+...++|+...+. ... +-.++|+.||..++.++.
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~---~~~nv~~~SG~~AN~av~~aL~ 121 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEK---WGVNVQPLSGSPANFAVYTALL 121 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcce---eEEecCcCchHHHHHHHHHHhC
Confidence 34577888888777 4332222 112256788888888899999988631 111 123788999988888875
Q ss_pred HHHHHHHHhcCCCCCCCeEEecC---CC---cchHHHHHhhhccee--E--EEeccCCccccCHHHHHHHHhh-cCcEEE
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGA---NV---QVCWEKFARYFEVEL--K--EVKLEEGYYVMNPVKAVELVDE-NTICVA 207 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~---~~---h~s~~~~~~~~G~~v--~--~v~~~~~~~~~d~~~L~~~i~~-~~~~v~ 207 (369)
.+ +++|+..+ .. |.+....++.-+... . ..+.+.+++.+|+++|++++.+ ++++|+
T Consensus 122 ~p-------------gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv 188 (475)
T PLN03226 122 QP-------------HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLII 188 (475)
T ss_pred CC-------------CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEE
Confidence 53 46888733 33 333333333222222 2 2344555689999999999874 677665
Q ss_pred EeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEE
Q 017569 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (369)
Q Consensus 208 ~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~ 287 (369)
+. .+.+|...|+++|.++|+++ ++++++|+|++.+..+. +..+.. ...+|.++.++|||+.+|.| |+
T Consensus 189 ~~--~S~~s~~~D~a~i~~ia~~~------ga~LlvD~AH~~Gli~~--~~~~~p--~~~~Div~~t~hK~L~GP~G-g~ 255 (475)
T PLN03226 189 AG--ASAYPRDWDYARMRKIADKV------GALLMCDMAHISGLVAA--QEAASP--FEYCDVVTTTTHKSLRGPRG-GM 255 (475)
T ss_pred Ee--cCcCCCccCHHHHHHHHHHc------CCEEEEEchhhhCcccC--CCCCCC--CCCCeEEEecCcccccCCCc-eE
Confidence 42 34478889999999999999 99999999998877631 111111 33799999999999999998 77
Q ss_pred EEEeCCCCcccccccc----cCcc--CCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 288 VVWRTKDDLPDELVFH----INYL--GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~----~~y~--~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+++++. .... +... .+|. -.....+..+++.+...++++.++++.+-..|++++ +..+++++|++.|.+.
T Consensus 256 I~~~~~-~~~~-~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 256 IFFRKG-PKPP-KGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred EEEchh-hccc-ccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 777653 2211 0000 0110 000011223456666678888999999987888776 9999999999999997
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|+
T Consensus 334 G~ 335 (475)
T PLN03226 334 GY 335 (475)
T ss_pred CC
Confidence 75
No 96
>PLN02271 serine hydroxymethyltransferase
Probab=99.82 E-value=2.2e-18 Score=169.29 Aligned_cols=264 Identities=9% Similarity=-0.034 Sum_probs=181.3
Q ss_pred CChHHHHHHHHHHhcc-CC-CCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCCchHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK-NY-VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~-n~-~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~~~~ 138 (369)
...+.+.+++...+.+ .. +.+ .......++|.-+.+...++||++++. . .-+-..+|+.||+.++.++.
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~---~gaNVQp~SGs~AN~aV~~ALl 235 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEK---WGVNVQPYSCTSANFAVYTGLL 235 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccc---cccceeeccHHHHHHHHHHHhc
Confidence 3457777777665543 11 111 112345689999999999999988621 1 12344489999999988885
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCC---CcchHH------HHHhhhcceeEEEe--ccCCccccCHHHHHH-HHhhcCcEE
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGAN---VQVCWE------KFARYFEVELKEVK--LEEGYYVMNPVKAVE-LVDENTICV 206 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~---~h~s~~------~~~~~~G~~v~~v~--~~~~~~~~d~~~L~~-~i~~~~~~v 206 (369)
++ +++|+..+. .|.+.. ..+...|..+..+| ++++++.+|.++|++ +...+|++|
T Consensus 236 ~P-------------GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLI 302 (586)
T PLN02271 236 LP-------------GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKIL 302 (586)
T ss_pred CC-------------CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEE
Confidence 53 467887554 444432 23345576666666 565568999999998 667799998
Q ss_pred EEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
++....++ ..-|+++|+++|+++ ++++++|+|+..+.++ ....+.. ..++|.++.++|||+.+|.| |
T Consensus 303 I~g~Sayp--r~~D~~~i~eIAdev------GA~LmvD~AH~aGLIa--~g~~~sP--~~~aDvvt~TTHKtLrGPrG-G 369 (586)
T PLN02271 303 ICGGSSYP--REWDYARFRQIADKC------GAVLMCDMAHISGLVA--AKECVNP--FDYCDIVTSTTHKSLRGPRG-G 369 (586)
T ss_pred EECchhcc--CcCCHHHHHHHHHHc------CCEEEEECcccccccc--cCcCCCC--CcCCcEEEeCCcccCCCCCc-e
Confidence 88666666 667999999999999 9999999999877762 1111111 34799999999999999999 7
Q ss_pred EEEEeCCCCcccccccc----------cCccCCCC--CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHH
Q 017569 287 WVVWRTKDDLPDELVFH----------INYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLS 352 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~----------~~y~~~~~--~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l 352 (369)
+++++++.. ...... .++..... .-+.++|......++++..+++......|.+. +..+||+.|
T Consensus 370 ~I~~r~~~~--~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL 447 (586)
T PLN02271 370 IIFYRKGPK--LRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL 447 (586)
T ss_pred EEEeccccc--ccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 777765311 110000 00100000 11345566556668999999998877777777 999999999
Q ss_pred HHHHHhcCC
Q 017569 353 SFFVIHSSY 361 (369)
Q Consensus 353 ~~~L~~~g~ 361 (369)
++.|.+.||
T Consensus 448 A~~L~~~G~ 456 (586)
T PLN02271 448 ASALLRRKC 456 (586)
T ss_pred HHHHHHCCC
Confidence 999999887
No 97
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=5.9e-19 Score=170.48 Aligned_cols=219 Identities=16% Similarity=0.052 Sum_probs=162.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|....||++ ++++.|.+. .++++||++|+..++.++..+ +++|+++++.|......
T Consensus 50 Pt~~~lE~~----lA~l~g~~~-------~~~~~sG~~Ai~~al~all~~-------------GD~Vl~~~~~y~~t~~~ 105 (377)
T TIGR01324 50 LTHFALQDA----MCELEGGAG-------CYLYPSGLAAVTNSILAFVKA-------------GDHVLMVDSAYEPTRYF 105 (377)
T ss_pred ccHHHHHHH----HHHHhCCCc-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEcCCCcHHHHHH
Confidence 556677777 888888764 789999999999998877442 47899999888765543
Q ss_pred ----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 ----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
++..|++++.++.. +.++++++++++|++|++++|+|++|.+.|+++|+++|+++ ++++++|++
T Consensus 106 ~~~~~~~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~------g~~livD~t 173 (377)
T TIGR01324 106 CDIVLKRMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNP------GIVIMIDNT 173 (377)
T ss_pred HHHHHHhcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 34568887776532 22789999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. ..| . ..++|.++.+++||++++.+ .|+++.++ +.. ..+. ...+.. |+ ...
T Consensus 174 ~a~g~~--~~p---l---~~gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~-~~l~-~~~~~~---------G~--~l~ 231 (377)
T TIGR01324 174 WAAGLL--FKP---L---EHGVDISIQAGTKYLVGHSDIMIGTVVANA-RTW-DQLR-EHSYLM---------GQ--MVD 231 (377)
T ss_pred Cccccc--cCc---c---ccCceEEEecCceeccCCCCceEEEEEeCH-HHH-HHHH-HHHHHh---------CC--CCC
Confidence 987554 111 1 23899999999999988765 46665543 222 1111 111111 11 123
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+...|..++.+..-+++-.++.++|..+++.|++++.+++.+|
T Consensus 232 p~~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~y 274 (377)
T TIGR01324 232 ADDAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLH 274 (377)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEEC
Confidence 5677887777765555522999999999999999999987765
No 98
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.82 E-value=9.2e-18 Score=164.41 Aligned_cols=270 Identities=11% Similarity=0.014 Sum_probs=182.7
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCCchHHH
Q 017569 54 GNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 54 ~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~ 130 (369)
++..++|..+.+... ++.+.+.+.+.+... ...|. ..+..++++++.+|+.+.+|.+ .+. ...+++|+|+++++
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~--~~~I~it~Gs~~al 119 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDP--VTEVIHSIGSKPAL 119 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCC--cceEEEccCHHHHH
Confidence 444566766666543 456777776655432 22333 3688999999999999888865 321 12489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEe
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
..++.++.+. ++.|+++.|+|..+...++..|++++.+|+++ +++.+|++++++++.+++++|+++
T Consensus 120 ~~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 186 (410)
T PRK06290 120 AMLPSCFINP-------------GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLN 186 (410)
T ss_pred HHHHHHhCCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEE
Confidence 8888877542 47899999999999999999999999999975 347889999999998889999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCC-CCCC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYG-LVYA 283 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l-~~p~ 283 (369)
.|+||||.+.+ +++|.++|+++ ++||++|.+|+.+... ..... ..+. ....+.+.-+..|.+ ..+.
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~------~~~iI~DEaY~~~~~~--~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl 258 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKEN------NIIVVQDAAYAALTFD--GKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW 258 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEecchhhceeC--CCCcChhcCCCccccEEEEeechhhcCCchh
Confidence 99999999966 67888889999 9999999999975431 11001 0111 123446666788887 4667
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcC
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.+|+++.. ++.. ..+.....+... ++ ..+.+.++...+.... +++. +..+..+++.+.|++.|
T Consensus 259 RiG~ii~~-~~l~-~~l~~~~~~~~~--------~~----~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 324 (410)
T PRK06290 259 RLAFVVGN-ELIV-KAFATVKDNNDS--------GQ----FIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG 324 (410)
T ss_pred heEeEEeC-HHHH-HHHHHHHhcccc--------CC----cHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88998863 2222 222111011000 01 1233334444443223 2333 66777888999998876
Q ss_pred C
Q 017569 361 Y 361 (369)
Q Consensus 361 ~ 361 (369)
+
T Consensus 325 ~ 325 (410)
T PRK06290 325 F 325 (410)
T ss_pred C
Confidence 3
No 99
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.82 E-value=1.2e-18 Score=169.70 Aligned_cols=220 Identities=13% Similarity=0.016 Sum_probs=155.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK- 169 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~- 169 (369)
|...+||++ +++++|.+. ..++++|+.|+..++.+...+ +++|+++.+.|.++..
T Consensus 65 p~~~~Le~~----lA~l~G~~~-------~~~~~sG~~Ai~~~l~~~l~~-------------Gd~Vl~~~~~y~~~~~~ 120 (398)
T PRK07504 65 PTVDMFEKR----MCALEGAED-------ARATASGMAAVTAAILCQVKA-------------GDHVVAARALFGSCRYV 120 (398)
T ss_pred chHHHHHHH----HHHHhCCCe-------eeEecCHHHHHHHHHHHHhCC-------------CCEEEEcCCchhHHHHH
Confidence 455566655 889999986 456788899998777654331 4789999988876443
Q ss_pred ---HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 170 ---FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 170 ---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
.+...|++++.++ .+|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 121 ~~~~~~~~G~~v~~vd------~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~------gi~lvvD~a 188 (398)
T PRK07504 121 VETLLPRYGIESTLVD------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQA------GAKLVVDNV 188 (398)
T ss_pred HHHHHhhcCeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHc------CCEEEEECC
Confidence 3445688888775 2589999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQI 325 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~ 325 (369)
|+.+.. .. +. ..++|.++.|+|||++++. ..|.+++.+++.+...+. .+.. ..|. ....
T Consensus 189 ~a~~~~--~~---~~---~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~-------~~g~--~~s~ 248 (398)
T PRK07504 189 FATPLF--QK---PL---ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR-------HTGP--SLSP 248 (398)
T ss_pred cccccc--CC---ch---hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH-------HhCC--CCCH
Confidence 975433 11 11 2278999999999997653 444444444433321111 0000 0011 1235
Q ss_pred HHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCcccc
Q 017569 326 IAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 326 l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
..+|..++.+..-..+..+..++|++++++|++.+.+++-+
T Consensus 249 ~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~ 289 (398)
T PRK07504 249 FNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVI 289 (398)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEE
Confidence 67777777665533332277799999999999988876543
No 100
>PRK07777 aminotransferase; Validated
Probab=99.81 E-value=5.6e-18 Score=164.88 Aligned_cols=213 Identities=14% Similarity=0.047 Sum_probs=160.5
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+.+.|... ++.+.+.+.+.+......|....+..++++++.+++.+.+|.+.+. ....++|+|+++|+.+++
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~ 102 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP--DTEVLVTVGATEAIAAAV 102 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCcHHHHHHHH
Confidence 3456666655432 3456666777666555556666789999999999999988986422 124889999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC--ccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
.++..+ ++.|+++.++|..+..+++..|..++.++++++ ++.+|+++|++++.+++++|++++|+
T Consensus 103 ~~~~~~-------------gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~ 169 (387)
T PRK07777 103 LGLVEP-------------GDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPH 169 (387)
T ss_pred HHhcCC-------------CCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCC
Confidence 766431 468999999999999999999999999998653 47899999999998889999999999
Q ss_pred CCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-cccc-cc-CCCCcEEEEcCccCCC-CCCCe
Q 017569 213 TLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-FR-LPLVKSINVSGHKYGL-VYAGV 285 (369)
Q Consensus 213 ~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~~-~~~~Dsi~~~~hK~l~-~p~g~ 285 (369)
||||.+. ++++|.++|+++ ++++++|++|+.+... ... .+.. +. ....+.+..+.+|.++ ...++
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRi 241 (387)
T PRK07777 170 NPTGTVLTAAELAAIAELAVEH------DLLVITDEVYEHLVFD--GARHLPLATLPGMRERTVTISSAAKTFNVTGWKI 241 (387)
T ss_pred CCCCccCCHHHHHHHHHHHHhc------CcEEEEeccchhcccC--CCCcccHhhCCCCcCcEEEEeechhhccCcCcee
Confidence 9999984 588999999999 9999999999865431 110 0111 11 1234677778999986 45668
Q ss_pred EEEEEe
Q 017569 286 GWVVWR 291 (369)
Q Consensus 286 g~l~~~ 291 (369)
|+++..
T Consensus 242 G~~~~~ 247 (387)
T PRK07777 242 GWACGP 247 (387)
T ss_pred EEEecC
Confidence 988764
No 101
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.81 E-value=4.9e-18 Score=165.44 Aligned_cols=268 Identities=13% Similarity=0.031 Sum_probs=181.1
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
+.++|+.+.+.. +++.+.+++.++++. ....|....+..++++++++++++.+|.+.+. ...+++|+|+++++..+
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~--~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN--EQAIVVTAGSNMAFMNA 105 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCChHHHHHHH
Confidence 345666666653 456788888877643 23445556788999999999999999975320 13488999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+.++.++ ++.|++++|+|..+...++..|++++.+|.+.+ +.+|+++|++++++++++|++++|+|
T Consensus 106 ~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~klv~~~~p~N 171 (389)
T PRK05957 106 ILAITDP-------------GDEIILNTPYYFNHEMAITMAGCQPILVPTDDN-YQLQPEAIEQAITPKTRAIVTISPNN 171 (389)
T ss_pred HHHhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCC-CCcCHHHHHHhcCcCceEEEEeCCCC
Confidence 8776432 478999999998888888889999999998754 89999999999998999999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccc-cCCCCcEEEEcCccCCC-CCCCeEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGW 287 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~ 287 (369)
|||.+.+ +++|+++|+++ |+++++|++|+.+...- .+... ..+ ....--....+.-|.++ ....+|+
T Consensus 172 PtG~~~~~~~~~~i~~~a~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 172 PTGVVYPEALLRAVNQICAEH------GIYHISDEAYEYFTYDG-VKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CcEEEEeccchhccCCC-CCccChhhCCCccCcEEEEecchhhccCccceeEE
Confidence 9999976 88999999999 99999999998754310 01011 111 11111133344668873 4456999
Q ss_pred EEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH--hhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF--EVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~--~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++.+ +.. +.+.....+.. .+- ..+.+.++...+.. +-+++. +..++.+++.+.|++.+
T Consensus 245 ~~~~~-~~~-~~~~~~~~~~~---------~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 307 (389)
T PRK05957 245 MVIPI-HLL-EAIKKIQDTIL---------ICP---PVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQ 307 (389)
T ss_pred EecCH-HHH-HHHHHHHhhcc---------cCC---CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98743 222 22211111000 011 12344454555522 223444 56677777888887764
No 102
>PRK07683 aminotransferase A; Validated
Probab=99.81 E-value=6e-18 Score=164.69 Aligned_cols=266 Identities=15% Similarity=0.121 Sum_probs=183.5
Q ss_pred ccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.|..+ ++.+.+++.+++..+...|....+..++++++.+++.+.+|.+.+. ...+++|+|+++|+.+++.+
T Consensus 31 i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~--~~~I~~t~G~~~al~~~~~~ 108 (387)
T PRK07683 31 ISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP--ESEIIVTIGASEAIDIAFRT 108 (387)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHHH
Confidence 45555555433 4667888888887665566566788999999999998877875321 12589999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+..+ ++.|+++.++|..+..+++.+|++++.++++++++.+|++++++.+.++++++++++|+||||
T Consensus 109 l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG 175 (387)
T PRK07683 109 ILEP-------------GTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTG 175 (387)
T ss_pred hCCC-------------CCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 6432 478999999999999999999999999999866688999999999988899999999999999
Q ss_pred cCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccc-cCCCCcEEEEcCccCCC-CCCCeEEEEE
Q 017569 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 217 ~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~ 290 (369)
.+. ++++|+++|+++ ++++++|++|..+.. -.+... ..+ ....-..+..+..|.++ ....+|+++.
T Consensus 176 ~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 176 VTLSKEELQDIADVLKDK------NIFVLSDEIYSELVY--EQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred cCCCHHHHHHHHHHHHHc------CeEEEEeccccccee--CCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 984 488999999999 999999999987543 111111 111 01112344556889886 5677899986
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. +.. +.+.....|... +. ..+.+.++...+ |..-+++. +..++.+++.+.|.+.|
T Consensus 248 ~~-~l~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 307 (387)
T PRK07683 248 PS-YLA-KHILKVHQYNVT--------CA----SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG 307 (387)
T ss_pred CH-HHH-HHHHHHHHhccC--------CC----ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 43 222 222111111110 11 112233333333 33323333 56777888888888765
No 103
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.81 E-value=3.2e-18 Score=166.23 Aligned_cols=187 Identities=14% Similarity=0.091 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
+...+++.++++.+.. ..++...++|++ +++++|.+. .++++||++|+.+++.++.-.
T Consensus 10 ~~~~~~v~~~~~~~~~--~~g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~~~l~al~~~--------- 67 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL--TQGPTVPAFEEA----LAEYVGAKY-------AVAFNSATSALHIACLALGVG--------- 67 (380)
T ss_pred HHHHHHHHHHHhcCCc--cCChhHHHHHHH----HHHHHCCCe-------EEEEcCHHHHHHHHHHHcCCC---------
Confidence 3446666777765543 234556666665 888888864 577788999999888876210
Q ss_pred CCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcccCCCHHHHH
Q 017569 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 150 ~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
.+++|+++.++|.++..++...|+++++++++++++.+|+++|+++++ ++|++|++ ++++|...|+++|.
T Consensus 68 ---~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~ 141 (380)
T TIGR03588 68 ---PGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIA 141 (380)
T ss_pred ---CCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHH
Confidence 147899999999999999999999999999987668999999999998 67888774 45689999999999
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeCCCC
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~~~~ 295 (369)
++|+++ ++++++|++++.+.. .... +... ....|..++|+| ||+.++.| |++++.+++.
T Consensus 142 ~l~~~~------~~~lI~D~a~a~g~~--~~~~-~~g~-~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~ 202 (380)
T TIGR03588 142 ALAKKH------GLKIIEDASHALGAE--YGGK-PVGN-CRYADATVFSFHPVKIITTAEG-GAVTTNDEEL 202 (380)
T ss_pred HHHHHc------CCEEEEECCCcccCc--cCCE-eCCC-ccccceEEEecCCCCcccccCc-eEEEECCHHH
Confidence 999999 999999999986543 1110 1100 113499999988 99977654 6666665433
No 104
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.81 E-value=3.4e-19 Score=171.42 Aligned_cols=260 Identities=15% Similarity=0.020 Sum_probs=174.8
Q ss_pred cCCChHHHHHHHHHHhcc----CCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCC-chHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINK----NYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLA 136 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~----n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~G-gt~a~~~al~~ 136 (369)
|...++.|.+++...+.. +...+..+ +...++.+++++.+++++|++.+ ...++|+| ||+|+..++..
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~----~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN----YKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHh
Confidence 444567888888887732 22222223 34557778999999999998532 35888887 99999988888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccC-HHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMN-PVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d-~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+..+ + ..++.|++....|.+ .+.++..|++++.++++++....+ ++..+..+++++++|.+++.+|.|
T Consensus 83 l~~~--------~--~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~t 151 (355)
T cd00611 83 LLGD--------K--GTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIH 151 (355)
T ss_pred cCCC--------C--CeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccc
Confidence 7321 0 112355554433333 446677899999999864311214 233334467789999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
|.+. . ++++.+ +++++||++++.+..| ++++ ..|....++||++ +|+|.|+++++++..
T Consensus 152 G~~~--~---~i~~~~------g~~~~VDa~qs~g~~~-------idv~--~~~~~~ss~~K~l-GP~G~g~l~~~~~~~ 210 (355)
T cd00611 152 GVEF--D---EVPDTG------GVPLVADMSSNILSRP-------IDVS--KFGVIYAGAQKNL-GPAGVTVVIVRKDLL 210 (355)
T ss_pred cEEc--c---eecccC------CCeEEEEccccccCCC-------CCHH--HhCEEEeeccccc-CCCceEEEEECHHHH
Confidence 9972 2 455568 9999999999887663 4443 2333445699986 699999999986422
Q ss_pred cccccccccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhc-CC
Q 017569 296 LPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHS-SY 361 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~-g~ 361 (369)
. ..-...+.+.... .......+|.+...++++.++++.+-.+ |++.+ |+.++++++++.|+++ |+
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 211 G-KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred h-hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 1 1000011111100 0111124788888899999999999888 79988 9999999999999999 74
No 105
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.81 E-value=1.4e-17 Score=161.74 Aligned_cols=267 Identities=13% Similarity=-0.007 Sum_probs=179.2
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
..++|+.+.+.. +++.+.+.+.+++.. ....|....+..++++++++++++.+|.+.+. ....++|+|+++++..+
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~vi~t~G~~~~l~~~ 107 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP--ETEVLSLIGSKEGIAHI 107 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCeEEECCCcHHHHHHH
Confidence 335566655553 346678888776643 23445555578899999999999888876421 12367889999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+.++.++ ++.|+++.++|..+...++.+|++++.+|+++ +++.+|++++++++.+++++|++++|+
T Consensus 108 ~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~ 174 (383)
T TIGR03540 108 PLAFVNP-------------GDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPN 174 (383)
T ss_pred HHHhCCC-------------CCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCC
Confidence 8876442 47899999999999999999999999999974 357889999999998899999999999
Q ss_pred CCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C---CCCcEEEEcCccCCC-CCCC
Q 017569 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---PLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 213 ~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---~~~Dsi~~~~hK~l~-~p~g 284 (369)
||||.+.+ +++|+++|+++ ++++++|.+|+.+... ... ...+. . ........+.-|.++ ....
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~l~~~--~~~-~~~~~~~~~~~~~~i~~~SfSK~~g~~GlR 245 (383)
T TIGR03540 175 NPTGAVAPLKFFKELVEFAKEY------NIIVCHDNAYSEITFD--GYK-APSFLEVDGAKDVGIEFHSLSKTYNMTGWR 245 (383)
T ss_pred CCcCccCCHHHHHHHHHHHHHc------CEEEEEecchhhhccC--CCC-CcCcccCCCcccCEEEEEecccccCCccce
Confidence 99999966 78899999999 9999999999865431 101 11111 1 112234456779873 4566
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+|+++.. ++.. ..+.....+... +.. .+.+.++...+ +.+-++++ +..++.+++.+.|++.|
T Consensus 246 iG~~i~~-~~l~-~~~~~~~~~~~~--------~~~----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 311 (383)
T TIGR03540 246 IGMAVGN-ADLI-AGLGKVKTNVDS--------GVF----QAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG 311 (383)
T ss_pred eeEEeCC-HHHH-HHHHHHHHhccc--------CCC----hHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8998753 3222 222110000000 111 12223333333 22334444 66788888999998865
No 106
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.4e-18 Score=168.54 Aligned_cols=220 Identities=15% Similarity=0.007 Sum_probs=158.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|....||+. ++++.|.+. .++++||++|+.+++.++..+ +++|+++.+.|......
T Consensus 52 pt~~~L~~~----lA~l~g~~~-------~i~~~sg~~Ai~~~l~~l~~~-------------GD~Vl~~~~~y~~~~~~ 107 (386)
T PRK08045 52 PTRDVVQRA----LAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRL 107 (386)
T ss_pred ccHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHH
Confidence 445555555 888888642 899999999999888876542 47899999998753332
Q ss_pred H-h---hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 A-R---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ~-~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ . ..|+++..++ ..|+++++++++++|++|++++|+||||.+.|+++|.++|+++ ++++++|++
T Consensus 108 ~~~~~~~~gi~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~------g~~vivDea 175 (386)
T PRK08045 108 FDSLAKRGCYRVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREA------GAVSVVDNT 175 (386)
T ss_pred HHHHHhhCCeEEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 2 2344555543 2588999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|..+.. .. +. ..++|.++.+++||++++.+ .|+++.++++.. +.+.....+.+. ...
T Consensus 176 y~~~~~--~~---pl---~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~g~------------~~~ 234 (386)
T PRK08045 176 FLSPAL--QN---PL---ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNIGV------------TGG 234 (386)
T ss_pred CCcccc--CC---ch---hhCCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhcCC------------CCC
Confidence 976432 11 11 23789999999999988876 577776554322 221111111111 124
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
++..|..++.+..-..+..++.++|..++++|++.+.+++-+|
T Consensus 235 p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~y 277 (386)
T PRK08045 235 AFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYH 277 (386)
T ss_pred HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEEC
Confidence 6778888888865333322999999999999999998876544
No 107
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.81 E-value=1.7e-17 Score=161.35 Aligned_cols=269 Identities=14% Similarity=-0.003 Sum_probs=180.0
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 55 NPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 55 ~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
.+.++|+.+.+.. +++.+.+.+.+++... ...|....+..++++++.+|+.+.+|.+.+. ....++|+|+++++..
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~ii~t~G~~~~i~~ 108 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP--ETEVISLIGSKEGIAH 108 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHHH
Confidence 3445566655543 3567888888777542 3344444578899999999999888875422 1237788999999988
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++.++ ++.|++++++|+.+...++..|++++.+|++. +++.+|++++++++.+++++|++++|
T Consensus 109 ~~~~~~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p 175 (385)
T PRK09276 109 IPLAFVNP-------------GDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYP 175 (385)
T ss_pred HHHHhCCC-------------CCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCC
Confidence 88876542 47899999999999999999999999999864 35789999999998888999999999
Q ss_pred CCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc--ccc-CCCCcEEEEcCccCCC-CCCC
Q 017569 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFR-LPLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 212 ~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~-~~~~Dsi~~~~hK~l~-~p~g 284 (369)
+||||.+.+ +++|+++|+++ ++++++|.+|+.+... ...... .+. .........+.-|.++ .+..
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 176 NNPTGAVADLEFFEEVVDFAKKY------DIIVCHDAAYSEIAYD--GYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHC------CcEEEEecchhheecC--CCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 999999966 68889999999 9999999999875431 100000 111 1122344456779873 4566
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--HhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+|+++.. ++.. ..+.....+... +. ..+.+.++...+. ..-++++ +..++.+++.+.|++.|
T Consensus 248 iG~~i~~-~~l~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 313 (385)
T PRK09276 248 IGFAVGN-ADLI-AGLGKVKSNVDS--------GV----FQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG 313 (385)
T ss_pred heeeeCC-HHHH-HHHHHHHhhccC--------CC----CHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999753 2222 222111011000 01 1223333344442 2233444 66777888989998865
No 108
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.81 E-value=1e-17 Score=163.44 Aligned_cols=220 Identities=15% Similarity=0.019 Sum_probs=159.4
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
+.+.++|+.+.+.. +++.+.+++.+.+. ....|....+..++++++.+|+.+.+|.+..-+.....++|+|+++++.+
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 34556666666653 45678888887764 34445555678999999999999988765210111247889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++.++ | +...|+++.|+|..+...++..|++++.+|+++ +++.+|+++|++++.+++++|++++|
T Consensus 106 ~~~~l~~~--------g---d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p 174 (393)
T TIGR03538 106 FAQAVINP--------G---QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSP 174 (393)
T ss_pred HHHHHcCC--------C---CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCC
Confidence 88887542 1 123599999999999999999999999999964 34789999999999888999999999
Q ss_pred CCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc--cccCCCC-----cEEEEcCcc-CCC
Q 017569 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLV-----KSINVSGHK-YGL 280 (369)
Q Consensus 212 ~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~-----Dsi~~~~hK-~l~ 280 (369)
+||||.+-+ +++|+++|+++ ++++++|.+|..+...-..+.... .....+. -.++.+.-| |+.
T Consensus 175 ~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~ 248 (393)
T TIGR03538 175 GNPTGAVLSLDTLKKLIELADQY------GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL 248 (393)
T ss_pred CCCcCcccCHHHHHHHHHHHHHC------CEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCC
Confidence 999999855 88899999999 999999999986543100000000 0000010 134556889 677
Q ss_pred CCCCeEEEEEe
Q 017569 281 VYAGVGWVVWR 291 (369)
Q Consensus 281 ~p~g~g~l~~~ 291 (369)
...++|+++..
T Consensus 249 ~GlRvG~~i~~ 259 (393)
T TIGR03538 249 PGLRSGFVAGD 259 (393)
T ss_pred cccceEEEecC
Confidence 88999998763
No 109
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.81 E-value=3.4e-18 Score=163.66 Aligned_cols=248 Identities=15% Similarity=-0.007 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHhccCCCCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
+|++.+++.+++++...++. ...+.....+++++.+++++|.+. .+++++|++++..++.++.++
T Consensus 17 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-------~iv~~sg~~a~~~~~~~~~~~----- 84 (349)
T cd06454 17 HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA-------ALVFSSGYAANDGVLSTLAGK----- 84 (349)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC-------EEEeccHHHHHHHHHHHhcCC-----
Confidence 47888988888864222211 122456666778888999999863 577778889998777766432
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCC
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~ 220 (369)
+++|+++.+.|+++...++..|++++.++. +|++++++++++ ++++|++++++|++|.+.|
T Consensus 85 --------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 85 --------GDLIISDSLNHASIIDGIRLSGAKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred --------CCEEEEehhhhHHHHHHHHHcCCceEEecC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 468999999999999888999998877752 467788888874 4678888899999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
+++|+++|+++ ++++++|++|+.+..+... .....+....+.|.++.++||+++. .| |+++.+ ++.. ..
T Consensus 151 ~~~i~~~~~~~------~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~-~~~~-~~ 220 (349)
T cd06454 151 LPELVDLAKKY------GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS-KELI-DY 220 (349)
T ss_pred HHHHHHHHHHc------CCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC-HHHH-HH
Confidence 99999999999 9999999999754432110 0001122234789999999999865 44 666654 3222 11
Q ss_pred cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 300 ~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+..... .+...++.+....+++..+++.+.. +..+ +..++++++.+.|.+.|+
T Consensus 221 ~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~ 275 (349)
T cd06454 221 LRSYAR-------GFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGF 275 (349)
T ss_pred HHHhch-------hhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111100 0111123333345566667766633 2233 888899999999988753
No 110
>PLN02368 alanine transaminase
Probab=99.81 E-value=7e-18 Score=164.62 Aligned_cols=201 Identities=11% Similarity=0.001 Sum_probs=148.2
Q ss_pred ChHHHHHHHHHHh-c-cCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH-HHHHHH
Q 017569 68 MEPECDKLVMASI-N-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~-~-~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~ 144 (369)
+++.+.+++.... . .....|....+..+|++++.+|+.+.+|.+.+. ..+++|+|+++++.+++.++. ++
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~p---- 154 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP---ELIFLTDGASKGVMQILNAVIRGE---- 154 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcccHHHHHHHHHHHHcCCC----
Confidence 3444555554422 1 224456666688999999999999888865422 358999999999998888775 32
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCccc
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~ 217 (369)
++.|++++|+|+.+...++..|+.++.+|+++ ++|.+|+++|++++++ +++++++++|+||||.
T Consensus 155 ---------Gd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~ 225 (407)
T PLN02368 155 ---------KDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQ 225 (407)
T ss_pred ---------CCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCc
Confidence 47899999999999999999999999999875 4589999999999975 6889999999999999
Q ss_pred CC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-----ccc--C-CCCcEEEE-cCccCC--CCCC
Q 017569 218 FE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-----DFR--L-PLVKSINV-SGHKYG--LVYA 283 (369)
Q Consensus 218 ~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-----~~~--~-~~~Dsi~~-~~hK~l--~~p~ 283 (369)
+. .+++|+++|+++ ++|+++|++|+.+...--.+.... ++. . .....+++ +..|.+ +.++
T Consensus 226 v~s~e~l~~l~~~a~~~------~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl 299 (407)
T PLN02368 226 CLSEANLREILKFCYQE------RLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ 299 (407)
T ss_pred cCCHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc
Confidence 84 477888899999 999999999987653100010010 000 0 01134444 478875 4789
Q ss_pred CeEEEEE
Q 017569 284 GVGWVVW 290 (369)
Q Consensus 284 g~g~l~~ 290 (369)
.+|++++
T Consensus 300 RiGy~i~ 306 (407)
T PLN02368 300 RGGYFEM 306 (407)
T ss_pred ceEEEEE
Confidence 9999986
No 111
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.3e-18 Score=169.31 Aligned_cols=219 Identities=14% Similarity=0.045 Sum_probs=161.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK- 169 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~- 169 (369)
|...+||+ .++++.|.+. +++++||++|+.+++.++..+ +++|+++.++|..+..
T Consensus 65 pt~~~Le~----~lA~l~g~~~-------~l~~~sgt~Ai~~~l~al~~~-------------GD~Vl~~~~~y~~~~~~ 120 (394)
T PRK07050 65 PTSLALAQ----RLAEIEGGRH-------ALLQPSGLAAISLVYFGLVKA-------------GDDVLIPDNAYGPNRDH 120 (394)
T ss_pred HHHHHHHH----HHHHHhCCCe-------EEEeccHHHHHHHHHHHHhCC-------------CCEEEEecCCcccHHHH
Confidence 34455555 4889999764 899999999999999887542 5799999999987553
Q ss_pred ---HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 170 ---FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 170 ---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
.+..+|+++++++.. +.++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 121 ~~~~~~~~Gi~v~~vd~~------~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~------gi~livD~a 188 (394)
T PRK07050 121 GEWLARDFGITVRFYDPL------IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARAR------GVVTAIDNT 188 (394)
T ss_pred HHHHHHhcCeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHc------CCEEEEECC
Confidence 456779888887643 34788999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. ..| . ..++|.++.|..|++.+..+ .|++++++++.. +.+.....+.+. +..
T Consensus 189 ~a~~~~--~~~---l---~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~-~~~~~~~~~~G~------------~~~ 247 (394)
T PRK07050 189 YSAGLA--FKP---F---EHGVDISVQALTKYQSGGSDVLMGATITADAELH-AKLKLARMRLGI------------GVS 247 (394)
T ss_pred cccccc--cCH---H---HcCCeEEEEECCceecCCCCeeEEEEEECCHHHH-HHHHHHHHhcCC------------CCC
Confidence 986543 222 1 23789999999999977665 577777665432 221111111111 223
Q ss_pred HHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+...|.+++.+..-.. .+ +..++|.++++.|++++.+++.++
T Consensus 248 ~~~a~l~lr~l~tl~~-Rl~~~~~~a~~la~~L~~~p~v~~v~~ 290 (394)
T PRK07050 248 ADDCSLVLRGLPSLQV-RLAAHDRSALEVAEWLKARPEIATVLH 290 (394)
T ss_pred HHHHHHHHcCCCcHHH-HHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 5666777765543222 33 889999999999999988776654
No 112
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=2.5e-18 Score=167.64 Aligned_cols=214 Identities=15% Similarity=0.027 Sum_probs=154.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~ 174 (369)
++.+.++++.|.+. .+++++|++|+.+++.++..+ ++.|+++.+.|.. +...+...
T Consensus 64 ~Le~~lA~l~g~~~-------~v~~~sG~~Ai~~~l~all~p-------------GD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 64 LLGEALAELEGGAG-------GVITATGMGAINLVLNALLQP-------------GDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred HHHHHHHHHhCCCc-------eEEEcCHHHHHHHHHHHHhCC-------------CCEEEEccCCchHHHHHHHHHHHhc
Confidence 34455888888754 578888899998888777442 4689999988876 34445555
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|+.++.++. .|+++|+++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++|..+..
T Consensus 124 g~~v~~v~~------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~------gi~vIvD~a~a~~~~-- 189 (405)
T PRK08776 124 HFALITADL------TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV------GALTVVDNTFLSPAL-- 189 (405)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 777766653 378999999988999999999999999999999999999999 999999999975332
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHH
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l 332 (369)
.. +.. .++|.+..|++|+++++.+ .|+++.++++.. +.+....... |. ...++..|..+
T Consensus 190 ~~---pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~-~~l~~~~~~~----------g~--~~s~~~a~l~~ 250 (405)
T PRK08776 190 QK---PLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELH-QQLVWWANAL----------GL--TGSPFDAFLTL 250 (405)
T ss_pred CC---ccc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHH-HHHHHHHHhc----------CC--CCCHHHHHHHH
Confidence 11 122 3789999999999988765 577777654332 2111100011 11 11356677666
Q ss_pred HHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 333 IRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 333 ~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+.+. -+..+ +..+++..+++.|++.+.+++-+|
T Consensus 251 ~gl~--tl~~r~~~~~~na~~la~~L~~~p~v~~V~y 285 (405)
T PRK08776 251 RGLR--TLDARLRVHQENADAIAALLDGHAAVNQVYY 285 (405)
T ss_pred hhhC--cHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 5443 34444 899999999999999998876544
No 113
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.80 E-value=6.2e-19 Score=169.49 Aligned_cols=225 Identities=12% Similarity=0.005 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcc
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~ 176 (369)
-++..+..|++||++. .-.+++|+|.+|..++.++..+ +++|+++.+.|-|+..++.+.|+
T Consensus 68 I~eAe~~aA~~fGAd~------t~flvnGsT~g~~a~i~a~~~~-------------gd~VLv~RN~HkSv~~alil~ga 128 (417)
T PF01276_consen 68 IKEAEELAARAFGADK------TFFLVNGSTSGNQAMIMALCRP-------------GDKVLVDRNCHKSVYNALILSGA 128 (417)
T ss_dssp HHHHHHHHHHHHTESE------EEEESSHHHHHHHHHHHHHTTT-------------TCEEEEETT--HHHHHHHHHHTE
T ss_pred HHHHHHHHHHhcCCCe------EEEEecCchHHHHHHHHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCC
Confidence 3456677999999996 3577889999999998888663 57999999999999999999999
Q ss_pred eeEEEeccCC----ccccCH-----HHHHHHHhhcC--c---EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE
Q 017569 177 ELKEVKLEEG----YYVMNP-----VKAVELVDENT--I---CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 177 ~v~~v~~~~~----~~~~d~-----~~L~~~i~~~~--~---~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
.+++++...+ -+.+++ +.|+++|++.+ + +|++++||.. |.+-|+++|+++|+++ ++.|+
T Consensus 129 ~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~-Gv~~di~~I~~~~h~~------~~~ll 201 (417)
T PF01276_consen 129 IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYY-GVCYDIKEIAEICHKH------GIPLL 201 (417)
T ss_dssp EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TT-SEEE-HHHHHHHHCCT------ECEEE
T ss_pred eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCC-eEEECHHHHHHHhccc------CCEEE
Confidence 9999987421 135566 99999998743 3 4888988655 9999999999999999 99999
Q ss_pred eecccccccccccCCCccccccCCCCc-------EEEEcCccCCCCCCCeEEEEEeCCC-CcccccccccCccCCCCCCc
Q 017569 243 VDAASGGFIAPFLYPDLEWDFRLPLVK-------SINVSGHKYGLVYAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTF 314 (369)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~D-------si~~~~hK~l~~p~g~g~l~~~~~~-~~~~~~~~~~~y~~~~~~~~ 314 (369)
||+|+|+... +.+-+. ..-..++| .++.|.||.+.+-..++++.+++.. .-...+.........
T Consensus 202 vDEAhGah~~--F~~lp~-~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T----- 273 (417)
T PF01276_consen 202 VDEAHGAHFG--FHPLPR-SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT----- 273 (417)
T ss_dssp EE-TT-TTGG--CSGGGT-TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS------
T ss_pred EEcccccccc--CCCCcc-chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC-----
Confidence 9999998654 333222 22245889 9999999999999999999998875 222222222222222
Q ss_pred cccCCcchhHHHHHHHHHHHh-cHhhHHHH-HhhHHHHHHHHHHHh
Q 017569 315 TLNFSKGSSQIIAQYYQFIRL-GFEVIPSF-CCVDHKKLSSFFVIH 358 (369)
Q Consensus 315 ~l~~tr~~~~~l~~~~~l~~l-g~~G~~~~-~~~~~a~~l~~~L~~ 358 (369)
-|++....+++-.+.+.+ +.+|-+.+ +.+++++++|++|++
T Consensus 274 ---TSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 274 ---TSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp ---SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 255566678888898999 78888888 999999999999943
No 114
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.80 E-value=1.9e-18 Score=168.02 Aligned_cols=213 Identities=16% Similarity=0.053 Sum_probs=153.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHhhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~----~~~~~~ 174 (369)
++++.+++++|.+. .++++||++|+..++.++..+ +++|+++.+.|.+.. ..+...
T Consensus 65 ~le~~la~l~g~~~-------~v~~ssG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~~~ 124 (390)
T PRK08133 65 MFQERLAALEGAEA-------CVATASGMAAILAVVMALLQA-------------GDHVVSSRSLFGSTVSLFEKIFARF 124 (390)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCcchhHHHHHHHHHHHc
Confidence 34455899999874 789999999999988876432 468999988876533 455678
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|++++.++++ |+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++++.+..
T Consensus 125 G~~v~~vd~~------d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~------gi~livD~t~~~~~~-- 190 (390)
T PRK08133 125 GIETTFVDLT------DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAA------GALLVVDNCFCTPAL-- 190 (390)
T ss_pred CcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9999888764 68899999999999999999999999999999999999999 999999999865432
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCCC-e-EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHH
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-V-GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~-g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l 332 (369)
..| . ..++|.++.|++|+++++.. . |+++.+ ++.+ ..+. .+... .|. ......+|..+
T Consensus 191 ~~p---l---~~g~Divv~S~sK~~~g~g~~~GG~vv~~-~~~~-~~~~---~~~~~-------~g~--~~~~~~a~~~l 250 (390)
T PRK08133 191 QQP---L---KLGADVVIHSATKYLDGQGRVLGGAVVGS-KELM-EEVF---GFLRT-------AGP--TLSPFNAWVFL 250 (390)
T ss_pred CCc---h---hhCCcEEEeecceeecCCcceEeEEEEcC-HHHH-HHHH---HHHHH-------hCC--CCCHHHHHHHH
Confidence 111 1 22689999999999976543 3 555543 3222 1111 01000 011 12345567666
Q ss_pred HHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 333 IRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 333 ~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+.+ +.+..+ +..+++++++++|++.+.+++.+|
T Consensus 251 ~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~y 285 (390)
T PRK08133 251 KGL--ETLSLRMEAHSANALALAEWLEAHPGVERVFY 285 (390)
T ss_pred ccc--chHHHHHHHHHHHHHHHHHHHHhCCCeeEEEC
Confidence 544 345444 778999999999999988877665
No 115
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=1.8e-18 Score=167.83 Aligned_cols=220 Identities=15% Similarity=-0.008 Sum_probs=158.1
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...++|+. +++++|.+. .++++||+.|+..++.++..+ ++.|+++.+.|.++..
T Consensus 52 np~~~~lE~~----lA~l~g~~~-------~l~~~sG~~Ai~~~l~~ll~~-------------GD~Vlv~~~~y~~~~~ 107 (385)
T PRK08574 52 NPTLRPLEEA----LAKLEGGVD-------ALAFNSGMAAISTLFFSLLKA-------------GDRVVLPMEAYGTTLR 107 (385)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHH
Confidence 3566677766 888999764 688899999999888876442 4789999999988766
Q ss_pred HHh---hhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 FAR---YFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.++ ..|++++.++ +|+++|++++++ ++++|++.+++||+|.+.|+++|+++|+++ ++++++|+
T Consensus 108 ~~~~~~~~g~~v~~~~-------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~------gi~livD~ 174 (385)
T PRK08574 108 LLKSLEKFGVKVVLAY-------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKEL------GAILVVDN 174 (385)
T ss_pred HHHHhhccCcEEEEEC-------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEEC
Confidence 653 4476666543 357899999998 899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+++.+.. ..+ . ..++|.++.|++||+++|.+ .|++++.+++.. ..+.....+. |.. .
T Consensus 175 t~a~~~~--~~~---l---~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~-~~~~~~~~~~----------g~~--~ 233 (385)
T PRK08574 175 TFATPLL--YRP---L---RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFL-EELWEWRRRL----------GTI--M 233 (385)
T ss_pred CCCcccc--CCh---h---hhCCcEEEeeCceeecCCCCceeEEEEECcHHHH-HHHHHHHHhc----------CCC--C
Confidence 9875432 111 1 23789999999999988764 366666654332 1111000111 111 1
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....+|..++.+..-..+-.+..++|++++++|++.+.+++-+|
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~y 277 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYY 277 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEEC
Confidence 24556766666654332211888899999999999998876554
No 116
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.80 E-value=2.2e-17 Score=158.77 Aligned_cols=306 Identities=14% Similarity=0.093 Sum_probs=178.1
Q ss_pred ccccccc-cchhHhhhCC-CCCCCCCCCCHHHHHHHHHHhhhhcCCCCcccccc-ccCCChHHHHHHHH---HHhcc-CC
Q 017569 12 EILSSTF-ASRYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASF-VTTWMEPECDKLVM---ASINK-NY 84 (369)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~-~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~-~~~~~~~~v~~~~~---~~~~~-n~ 84 (369)
++|+++| ..+|-.-++. +..+|+. .++.++++.+..+...+.....-++.+ .....|+.+.+.+. +++.. .+
T Consensus 21 ~sieeL~~~~IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtP 99 (429)
T PF02347_consen 21 KSIEELFDSDIPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTP 99 (429)
T ss_dssp SSTGGGG-TTS-GGG-SS-----------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-ST
T ss_pred CCHHHHhhhhCCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCC
Confidence 5788999 7777644444 3456655 899999999999887654422112222 22233455555233 33332 34
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 017569 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (369)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h 164 (369)
++++.++|.-+...+.+.+++++.|++. .+...-.|++.+--.++++.+.. + .++.+|++|...|
T Consensus 100 YQpEisQG~Lq~lfe~Qs~i~eLTGmdv-----aNaSlyd~atA~aEa~~ma~r~~-~---------~~~~~vlv~~~~h 164 (429)
T PF02347_consen 100 YQPEISQGRLQALFEYQSMICELTGMDV-----ANASLYDGATAAAEAMLMAVRAT-K---------RKRNKVLVPESLH 164 (429)
T ss_dssp TSGGGBHHHHHHHHHHHHHHHHHHTSSE-----E-SEBSSCCHHHHHHHHHHHHHH-T---------T---EEEEETTS-
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhCCCc-----cCCCCCChhHHHHHHHHHHHHhc-c---------cCCcEEEEcCCcC
Confidence 5556677888888899999999999995 12334446664443333333332 0 0135899999999
Q ss_pred chHHHHHh----hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 165 VCWEKFAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 165 ~s~~~~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
+.+...++ ..|++++.+|++++ +..| ++++.+|++++||+. |.++++++|++++|++ +..
T Consensus 165 P~~~~v~~t~a~~~g~~iv~~~~~~~-~~~d--------~~~~a~v~vq~Pn~~-G~~ed~~~i~~~~h~~------gal 228 (429)
T PF02347_consen 165 PQTRAVLRTYAAPLGIEIVEVPLDED-GTTD--------DDDTAAVMVQNPNTF-GVFEDIKEIADIAHAA------GAL 228 (429)
T ss_dssp CHHHHHHHHHCCHCCEEEEEE-BBTT-CSB---------STTEEEEEEESS-TT-SB--THHHHHHHHHHT------T-E
T ss_pred hhhHHHHHHhhhhCCeEEEEeccccc-CCcc--------ccCeEEEEeecCCCC-ceEeeHHHHHHHHHHc------CCE
Confidence 98877544 46888999998764 5666 778999999999877 9999999999999999 988
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCC-----CCCCCeEEEEEeCCCCcccccccc-----cCccCCC
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-----LVYAGVGWVVWRTKDDLPDELVFH-----INYLGSD 310 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l-----~~p~g~g~l~~~~~~~~~~~~~~~-----~~y~~~~ 310 (369)
+++ ++--.... .+.+ +-+ .|+|.+ ++.||-+ ++++++|++.+|+. +.+.++.. .+-.+..
T Consensus 229 ~~~-~ad~~aL~-~l~~--Pge---~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~lPGRiVG~t~D~~G~~ 298 (429)
T PF02347_consen 229 VIV-GADPNALG-GLKS--PGE---YGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVRQLPGRIVGQTKDADGKR 298 (429)
T ss_dssp EEE-CGGCCGCC-TC----GGG---GT-SEE-EECCTTTT---CCC-S--EEEEE-GG--GGGGS-S-EEEEEEBCCCSC
T ss_pred EEE-ecCHHHHh-CcCC--hhh---cCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhhhCCCceecccccccccc
Confidence 887 55221111 1111 222 389999 5556664 44467899999875 22222111 0111110
Q ss_pred ---------CCC------ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 311 ---------QPT------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 311 ---------~~~------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++. ..--||-.+..++..++++..+|.+|++++ ++..+|+|++++|.+.
T Consensus 299 ~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 299 AFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp CEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred eeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 011278888888899999999999999999 9999999999999985
No 117
>PRK07179 hypothetical protein; Provisional
Probab=99.80 E-value=5.7e-18 Score=165.94 Aligned_cols=250 Identities=8% Similarity=-0.066 Sum_probs=166.6
Q ss_pred ChHHHHHHHHHHhccCCCCC---CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
..|.+.+++.++++.....+ ..+........++.+.+++++|.+. .++++||++||..++.++...
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~sG~~An~~~l~~l~~~---- 137 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES-------CLLCQSGWAANVGLLQTIADP---- 137 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC----
Confidence 45788888888775432111 1111111233344456999999864 688999999999988876442
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
++.|+++...|.++...++..|+++..++ ..|+++|++++++ ++++|++..++|++|.+.|+++
T Consensus 138 ---------g~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~ 202 (407)
T PRK07179 138 ---------NTPVYIDFFAHMSLWEGVRAAGAQAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLAD 202 (407)
T ss_pred ---------CCEEEEECCcCHHHHHHHHHCCCeEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHH
Confidence 36788999999999888888887765443 2489999999987 4788889999999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
|.++|+++ ++++|+|++|+.+..+.........+. ..++|.++.+.||++++ +.|+++.++ +.. ..+..
T Consensus 203 I~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~-~~~-~~~~~ 272 (407)
T PRK07179 203 IVDIAEEF------GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPR-ELA-EYVPF 272 (407)
T ss_pred HHHHHHHc------CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCH-HHH-HHHHH
Confidence 99999999 999999999986443100000000122 13679999999999864 368887753 221 12110
Q ss_pred ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 ~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
..+. ....+|.+...++++.++++.+... -..+ +..++.++|++.|++.|+
T Consensus 273 -~~~~------~~~~~t~~~~~~aa~~aal~~~~~~-~~~~~~l~~~~~~l~~~L~~~g~ 324 (407)
T PRK07179 273 -VSYP------AIFSSTLLPHEIAGLEATLEVIESA-DDRRARLHANARFLREGLSELGY 324 (407)
T ss_pred -hCcC------eeeCCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 0000 0011333333445555667666332 1233 889999999999998864
No 118
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.80 E-value=1.1e-17 Score=163.03 Aligned_cols=211 Identities=17% Similarity=0.115 Sum_probs=156.6
Q ss_pred CccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++++...+.. +++.+.+++.+++......|....+..++++++++++.+.+|.+.+. ...+++|+|+++|+.+++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 32 ILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP--ENEILVTIGATEALSASLT 109 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHH
Confidence 34555554443 34567777777765444445555678999999999999888875321 1358999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGS 212 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~ 212 (369)
++..+ +++|++++++|..+...++..|++++.+|++++++.+|+++|++++++ ++++|++++|+
T Consensus 110 ~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~ 176 (391)
T PRK07309 110 AILEP-------------GDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPA 176 (391)
T ss_pred HhcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCC
Confidence 76432 468999999999999999999999999998765578999999999874 57899999999
Q ss_pred CCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEEEEcCccCCC-CCCCeE
Q 017569 213 TLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGL-VYAGVG 286 (369)
Q Consensus 213 ~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi~~~~hK~l~-~p~g~g 286 (369)
||||.+- ++++|+++|+++ ++++++|++|+.+.. ..+. ...+. ...--.+..+..|.++ ...++|
T Consensus 177 NPtG~~~s~~~~~~l~~~~~~~------~~~ii~D~~y~~~~~--~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 177 NPTGVTYSREQIKALADVLKKY------DIFVISDEVYSELTY--TGEP-HVSIAEYLPDQTILINGLSKSHAMTGWRIG 247 (391)
T ss_pred CCCCcCcCHHHHHHHHHHHHHc------CcEEEEEccccceee--CCCC-CCCHHHhccCCEEEEecChhhccCccceeE
Confidence 9999974 589999999999 999999999987553 1111 11111 1111244556889874 556789
Q ss_pred EEEEe
Q 017569 287 WVVWR 291 (369)
Q Consensus 287 ~l~~~ 291 (369)
+++..
T Consensus 248 ~~v~~ 252 (391)
T PRK07309 248 LIFAP 252 (391)
T ss_pred EEEeC
Confidence 99864
No 119
>PRK08068 transaminase; Reviewed
Probab=99.80 E-value=1.6e-17 Score=161.82 Aligned_cols=269 Identities=9% Similarity=-0.060 Sum_probs=179.7
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
..++|+.+.|..+ ++.+.+.+.++++.. ...|...++..+|++++.+++.+.+|.+.+. ...+++|+|+++++..+
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~--~~~i~it~G~~~~l~~~ 110 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP--ETEVAILFGGKAGLVEL 110 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCcHHHHHHH
Confidence 3456666655543 466778887777543 2345455788999999999998878865421 11478999999999887
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+.++..+ ++.|+++.|+|..+...++..|++++.+|+++ +++.+|++++++++.+++++|+++.|+
T Consensus 111 ~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~ 177 (389)
T PRK08068 111 PQCLMNP-------------GDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPN 177 (389)
T ss_pred HHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCC
Confidence 7776432 47899999999999999999999999999975 357899999999998889999999999
Q ss_pred CCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC---CCCcEEEEcCccCC-CCCCCe
Q 017569 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL---PLVKSINVSGHKYG-LVYAGV 285 (369)
Q Consensus 213 ~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~~Dsi~~~~hK~l-~~p~g~ 285 (369)
||||.+-+ +++|.++|+++ ++++++|.+|+.+.. -.......... ..-..+..+.-|.+ .....+
T Consensus 178 NPTG~~~s~~~~~~l~~la~~~------~~~ii~Deay~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRi 249 (389)
T PRK08068 178 NPTGAVATKAFFEETVAFAKKH------NIGVVHDFAYGAIGF--DGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRV 249 (389)
T ss_pred CCCCCcCCHHHHHHHHHHHHHc------CeEEEEehhhhhhcc--CCCCCcChhhCCCccCCEEEEecchhccCCcccee
Confidence 99999966 56788899999 999999999976432 11011011111 11224455778887 466788
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
|+++.. ++.+ ..+........ .+-+ ...+.++...+ +.+-++++ +..+..+++.+.|++.|+
T Consensus 250 G~~~~~-~~l~-~~l~~~~~~~~---------~~~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~ 315 (389)
T PRK08068 250 AFAVGN-ESVI-EAINLLQDHLF---------VSLF---GAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW 315 (389)
T ss_pred EeEecC-HHHH-HHHHHHHhhcc---------CCCC---hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999853 3222 22211111000 1111 11222333333 22333444 667777888888888763
No 120
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.80 E-value=1.4e-17 Score=162.65 Aligned_cols=217 Identities=13% Similarity=0.016 Sum_probs=159.9
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCCchHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~~ 131 (369)
+.+.++|+.+.+.. +++.+.+++.+.++ ....|....+..++++++.+|+.+.+|.+ .+. ...+++|+|+++++.
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~~i~it~G~~~al~ 104 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP--ATQVLPVNGSREALF 104 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc--cceEEECCChHHHHH
Confidence 34445666655553 35667888877765 34455556678899999999999988865 321 124888999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEee
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
+++.++.++ +.+++.|+++.|+|..+..+++..|++++.||+++ +++.+|+++|++.+.+++++++++.
T Consensus 105 ~~~~~l~~~----------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 174 (396)
T PRK09147 105 AFAQTVIDR----------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCS 174 (396)
T ss_pred HHHHHHcCC----------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcC
Confidence 888877541 12346899999999999999999999999999974 3478999999998888899999999
Q ss_pred CCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-cc---CCCC---c--EEEEcCcc-
Q 017569 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR---LPLV---K--SINVSGHK- 277 (369)
Q Consensus 211 ~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~---~~~~---D--si~~~~hK- 277 (369)
|+||||.+- .+++|+++|+++ ++|+++|.+|+.+... ....... +. ..+. + .+..+.-|
T Consensus 175 P~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 175 PGNPTGAVLPLDDWKKLFALSDRY------GFVIASDECYSEIYFD--EAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEeeccccccccC--CCCCCchhhhhccccCccccccEEEEeccccc
Confidence 999999985 588888999999 9999999999875431 1101110 00 0011 1 44456889
Q ss_pred CCCCCCCeEEEEEe
Q 017569 278 YGLVYAGVGWVVWR 291 (369)
Q Consensus 278 ~l~~p~g~g~l~~~ 291 (369)
+++.+.++|+++..
T Consensus 247 ~~~~GlRiG~~~~~ 260 (396)
T PRK09147 247 SNVPGLRSGFVAGD 260 (396)
T ss_pred cCCccceeeeecCC
Confidence 56777899998763
No 121
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.80 E-value=1.4e-17 Score=163.43 Aligned_cols=215 Identities=16% Similarity=0.118 Sum_probs=160.7
Q ss_pred cCCCCccccccccC-----CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhC------CCCCCCCCCCe
Q 017569 53 DGNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFN------TPVADDKTAVG 120 (369)
Q Consensus 53 ~~~p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g------~~~~~~~~~~~ 120 (369)
.+.+.++|+.+.|. .+++.+.+++.++++.+ ...|....+..+|++++.+++.+.++ ...+ ...+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~---~~~i 107 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK---KDNV 107 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC---hhhE
Confidence 44455677777775 34567888888877653 34455455789999999998887654 2211 1358
Q ss_pred EEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHH
Q 017569 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELV 199 (369)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i 199 (369)
++|+|+++++.+++.++..+ ++.|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++
T Consensus 108 ~it~G~~~al~~~~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 108 VLCSGVSHAILMALTALCDE-------------GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred EEeCChHHHHHHHHHHhcCC-------------CCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 99999999999988887542 47899999999999999999999999999864 45899999999999
Q ss_pred hhcCcEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--ccccCCCCcEE-EE
Q 017569 200 DENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSI-NV 273 (369)
Q Consensus 200 ~~~~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~Dsi-~~ 273 (369)
++++++|++++|+||||.+. ++++|+++|+++ ++++++|++|..+... ..... ..+. ...+.+ .-
T Consensus 175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~-~~~~~i~~~ 245 (412)
T PTZ00433 175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL------RLPLISDEIYAGMVFN--GATFTSVADFD-TTVPRVILG 245 (412)
T ss_pred ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCeEEEeccccccccC--CCCccchhhcc-CCCceEEEc
Confidence 88899999999999999874 588889999999 9999999999865431 11100 1111 111233 44
Q ss_pred cCccCC-CCCCCeEEEEEeC
Q 017569 274 SGHKYG-LVYAGVGWVVWRT 292 (369)
Q Consensus 274 ~~hK~l-~~p~g~g~l~~~~ 292 (369)
+.-|.+ ....++|++++.+
T Consensus 246 SfSK~~~~pGlRlG~~i~~~ 265 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVD 265 (412)
T ss_pred cchhhcCCCCeeEEEEEEeC
Confidence 678976 6778999999744
No 122
>PRK07550 hypothetical protein; Provisional
Probab=99.80 E-value=2e-17 Score=161.02 Aligned_cols=230 Identities=14% Similarity=0.028 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhhhhcCCCCccccccccCCC-hHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCC
Q 017569 39 KEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (369)
..++++.+.+.- ..+.+.+.|+...+... ++.+.+.+.+.+.. ....|...++..+|++++++++.+..|...+.
T Consensus 14 ~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-- 90 (386)
T PRK07550 14 IPEVRAWLAGYD-GADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-- 90 (386)
T ss_pred HHHHHHHHHHHh-hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc--
Confidence 345555444332 12334455665555433 46677777766543 23345555689999999999999988876422
Q ss_pred CCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHH
Q 017569 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKA 195 (369)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L 195 (369)
..+++|+|+++|+.+++.++..+ +++|+++.++|..+...++..|++++.+++++ +++.+|+++|
T Consensus 91 -~~i~~t~G~~~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l 156 (386)
T PRK07550 91 -EQVHITSGCNQAFWAAMVTLAGA-------------GDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA 156 (386)
T ss_pred -ceEEEecCcHHHHHHHHHHhcCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHH
Confidence 35889999999998888776442 47899999999999888899999999999974 4578999999
Q ss_pred HHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCc-EE
Q 017569 196 VELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVK-SI 271 (369)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D-si 271 (369)
++++++++++|+++.|+||||.+.+ +++|+++|+++ ++++++|.+|+.+......+............ ..
T Consensus 157 ~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~------~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (386)
T PRK07550 157 EALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRH------GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVH 230 (386)
T ss_pred HHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CeEEEEeccchhhccCCCCCcchhhCCCccccEEE
Confidence 9999989999999999999999855 88999999999 99999999998643210001000111001112 33
Q ss_pred EEcCccCCC-CCCCeEEEEEe
Q 017569 272 NVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 272 ~~~~hK~l~-~p~g~g~l~~~ 291 (369)
..+..|.++ ...+.|+++..
T Consensus 231 ~~S~SK~~g~~G~RiG~i~~~ 251 (386)
T PRK07550 231 LYSFSKSYALTGHRVGAVVAS 251 (386)
T ss_pred EecchhhccCcccceEeeecC
Confidence 557889875 55678999874
No 123
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=6.6e-18 Score=160.24 Aligned_cols=249 Identities=12% Similarity=0.027 Sum_probs=179.2
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
.....+++.+.+.+++... ++...+||++ +++++|+.. .+.+++||.|+.++++++.-
T Consensus 14 ~~~e~~~v~~vl~sg~i~~--G~~v~~FE~~----~ae~~G~k~-------ava~~sgT~AL~laL~al~i--------- 71 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTG--GPFVRRFEQA----FAEYLGVKY-------AVAVSSGTAALHLALLALAI--------- 71 (374)
T ss_pred chHHHHHHHHHHHcCCeec--ChHHHHHHHH----HHHHhCCCe-------EEEecChHHHHHHHHHhcCC---------
Confidence 3556788889998887764 6778888887 999999997 89999999999999997531
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
..+++||+|..++.+...++-+.|+++++|++|++++.||++.||++|+++|++|+ |....|..-|+++|.++|
T Consensus 72 ---g~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIi---pVhl~G~~~dm~~i~~la 145 (374)
T COG0399 72 ---GPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAII---PVHLAGQPCDMDAIMALA 145 (374)
T ss_pred ---CCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEE---EehhccCCCCHHHHHHHH
Confidence 12579999999999999999999999999999998899999999999999999987 566779888999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc-cccCcc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV-FHINYL 307 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~-~~~~y~ 307 (369)
++| +++|+.|+|++.+.. ...+..-. ...+-.+++-+.|.+.+. ..|+++..|+++...... ......
T Consensus 146 ~~~------~l~vIEDaAqa~Ga~--y~gk~vGt--~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~ 214 (374)
T COG0399 146 KRH------GLPVIEDAAQAHGAT--YKGKKVGS--FGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLS 214 (374)
T ss_pred HHc------CCeEEEEcchhccCe--ecCccccc--ccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcC
Confidence 999 999999999987664 22211111 334677888899999766 457888877654322111 111110
Q ss_pred C-----CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 308 G-----SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 308 ~-----~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. .....+..++-.+-..++-.+..| +.++++ +..+++++..+.|++.+.
T Consensus 215 ~~~~~~y~~~~~G~N~rm~~iqAAigl~QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~ 270 (374)
T COG0399 215 RDAVFKYLHEELGYNYRLTEIQAAIGLAQL-----ERLDEINERRREIAQIYAEALKGLPG 270 (374)
T ss_pred CCccccceeeecccccCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 0 000111111111111222222222 234444 888999999999987653
No 124
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=2.1e-18 Score=169.86 Aligned_cols=218 Identities=11% Similarity=0.042 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~ 171 (369)
..+++.++++++.|.+. .+++++|+.|+.+++ .+.+ .+++|+++.+.|..+... +
T Consensus 134 t~~aLE~~lA~leg~e~-------ai~~~SG~aAi~~il-~ll~-------------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVT-HLIK-------------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE-------EEEeCcHHHHHHHHH-HHhC-------------CCCEEEEcCCchhhHHHHHHHHH
Confidence 45667777999988764 677788887764433 3322 147899999999887633 4
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
...|+.++.++. .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++++.+.
T Consensus 193 ~~~G~~v~~vd~------~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~------g~~lIVD~A~a~~~ 260 (464)
T PLN02509 193 PRSGVVVKRVNT------TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_pred HHCCeEEEEeCC------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCccccc
Confidence 466888877753 268999999999999999999999999999999999999999 99999999987654
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
. ..+ . ..++|.++.+++||+.++.+ .|+++++++... ..+.. ..... ++ ......+|
T Consensus 261 ~--~~p---l---~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~-~~~~~-~~~~~---------g~--~l~p~~A~ 319 (464)
T PLN02509 261 L--SRP---L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYF-LQNSE---------GS--GLAPFDCW 319 (464)
T ss_pred c--CCh---h---hcCCcEEEecCcccccCCCccceeEEEeccHHHH-HHHHH-HHHhc---------CC--CcCHHHHH
Confidence 3 111 1 23799999999999988776 688877654321 11110 00000 11 12355677
Q ss_pred HHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 330 YQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 330 ~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
..++.+..-..+-.+..++|+++++.|++++.+++-+|
T Consensus 320 l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~y 357 (464)
T PLN02509 320 LCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYY 357 (464)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEEC
Confidence 77776654333211999999999999999999887654
No 125
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=2e-18 Score=167.16 Aligned_cols=214 Identities=9% Similarity=0.034 Sum_probs=152.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHhh
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~~~ 173 (369)
+++.+.+++++|.+. .+++++|+.|+..++. +.. .+++|+++.+.|.++.. .+..
T Consensus 50 ~~le~~la~l~g~~~-------~l~~~sG~~al~~~l~-ll~-------------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKADR-------AFAFSSGMAALDVITR-LLN-------------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 355566999999864 6777888888765443 322 14689999988877554 3455
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (369)
.|++++.++++ |++++++++++++++|++++|+||+|.+.|+++|+++|+++ ++++++|++++.+..
T Consensus 109 ~G~~v~~vd~~------d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~------g~~vivD~a~~~~~~- 175 (378)
T TIGR01329 109 SGVVVVHVDTT------DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ------NALVVVDNTMMSPLL- 175 (378)
T ss_pred cCcEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 79999888763 78999999999999999999999999999999999999999 999999999865432
Q ss_pred ccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHH
Q 017569 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ 331 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~ 331 (369)
.. +.. .++|.+..|+|||+++|.+ .|+++++++... +.+.. ..... |.. ......|..
T Consensus 176 --~~--~l~---~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~-~~~~~-~~~~~---------G~~--~~~~~a~l~ 235 (378)
T TIGR01329 176 --CN--PLE---LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIA-KKVYF-LQNST---------GSG--LAPFDCWLL 235 (378)
T ss_pred --CC--hhh---cCCcEEEEecceeccCCccceeEEEEeCcHHHH-HHHHH-HHHhc---------CCc--CCHHHHHHH
Confidence 11 111 2789999999999998877 888888764332 11110 00000 111 113344544
Q ss_pred HHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 332 FIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 332 l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
++.+ +.+..+ +..+++..++++|++.+..++-+|
T Consensus 236 ~~~l--~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~ 271 (378)
T TIGR01329 236 LRGI--KTLAIRIEKQQENARAIAMFLSTHPRVKKVRY 271 (378)
T ss_pred HccC--CCHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 4433 344444 899999999999999988865543
No 126
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=5e-18 Score=166.60 Aligned_cols=230 Identities=14% Similarity=0.005 Sum_probs=155.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHhhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~----~~~~~~ 174 (369)
.+++.++++.|.+. .+++++|+.|+.+++.++.. .+++||++...|.+.. ..+...
T Consensus 73 ~le~~la~l~g~~~-------~v~fsSG~~Ai~~al~~ll~-------------~Gd~VI~~~~~y~~t~~~~~~~l~~~ 132 (437)
T PRK05613 73 ALENRIASLEGGVH-------AVAFASGQAAETAAILNLAG-------------AGDHIVTSPRLYGGTETLFLVTLNRL 132 (437)
T ss_pred HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhcC-------------CCCEEEECCCccHHHHHHHHHHHHhc
Confidence 44445999999864 67777888999877776532 1478999998888763 445667
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|+++++++ ++. |+++++++++++|++|++.+++||+|.+.|+++|+++|+++ ++++|||++++.+..
T Consensus 133 Gi~v~~vd-~~~----d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~------gi~livD~t~a~g~~-- 199 (437)
T PRK05613 133 GIEVTFVE-NPD----DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRN------QVPLIVDNTIATAAL-- 199 (437)
T ss_pred CeEEEEEC-CCC----CHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCeEEEECCCccccc--
Confidence 99999988 332 78999999999999999999999999999999999999999 999999999875433
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCCCCccc------ccc---cccCccC--CC-----CCC----
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPD------ELV---FHINYLG--SD-----QPT---- 313 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~------~~~---~~~~y~~--~~-----~~~---- 313 (369)
..+ . ..++|.++.|+|||++++. +.|.+++.++..... ... ....+.. .. ...
T Consensus 200 ~~p---~---~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T PRK05613 200 VRP---L---ELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLK 273 (437)
T ss_pred cCh---H---HhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHH
Confidence 111 1 2389999999999996653 335555533221000 000 0000000 00 000
Q ss_pred ---ccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 314 ---FTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 314 ---~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
......-....+..+|..++.+..-..+-.++.++|..++++|++++.+++-+|
T Consensus 274 ~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 274 ARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 000011112345677776666655444422999999999999999998876554
No 127
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=3.3e-18 Score=166.27 Aligned_cols=217 Identities=16% Similarity=0.057 Sum_probs=156.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|...+||++ +++++|.+. .+++++|++|+.+++.++..+ +++|+++.+.|.+....
T Consensus 61 p~~~~Le~~----lA~~~g~~~-------~i~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~t~~~ 116 (388)
T PRK07811 61 PTRTALEEQ----LAALEGGAY-------GRAFSSGMAATDCLLRAVLRP-------------GDHIVIPNDAYGGTFRL 116 (388)
T ss_pred ccHHHHHHH----HHHHhCCCc-------eEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchHHHHH
Confidence 566667666 888999875 566778899999998887542 47899999998854332
Q ss_pred H----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ ...|++++.++. .|+++|+++++++|++|+++.|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 117 ~~~~~~~~gi~~~~~d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~------gi~lIvD~a 184 (388)
T PRK07811 117 IDKVFTRWGVEYTPVDL------SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDA------GAKVVVDNT 184 (388)
T ss_pred HHHhCcCCCeEEEEeCC------CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 235777666654 378999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. ..| . ..++|.++.|++||+++|.+ .|++++++++.. ..+.....+.+. ...
T Consensus 185 ~a~~~~--~~p---~---~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~~~~~~~g~------------~~s 243 (388)
T PRK07811 185 FASPYL--QQP---L---ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFAFLQNGAGA------------VPG 243 (388)
T ss_pred CCcccc--CCc---h---hhCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHHHHHHhcCC------------CCC
Confidence 986432 111 1 23789999999999987754 587877654332 211110011110 112
Q ss_pred HHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
+...|..++.+.. +..+ +..++|+.++++|++.+.+++-+
T Consensus 244 ~~~a~l~~~~L~t--l~~R~~~~~~na~~la~~L~~~p~v~~V~ 285 (388)
T PRK07811 244 PFDAYLTLRGLKT--LAVRMDRHSENAEAVAEFLAGHPEVSTVL 285 (388)
T ss_pred HHHHHHHHhccCc--HHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 4456766666654 3333 88899999999999998776543
No 128
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.80 E-value=3.5e-17 Score=160.15 Aligned_cols=215 Identities=15% Similarity=0.153 Sum_probs=157.5
Q ss_pred CCCCccccccccC-----CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch
Q 017569 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (369)
Q Consensus 54 ~~p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (369)
+...++|+.+.|. ++++.+.+++.+++..+. ..|....+..++++++.+++....|.+.+ ....++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~ii~t~G~t 106 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT---ADDVVLTSGCS 106 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC---HHHEEEecChH
Confidence 3444667777663 345678888888776543 34445567778888877666654454321 13488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEE
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v 206 (369)
+|+.+++.++..+ +++|+++.++|..+...++..|++++.+++++ +++.+|++++++++.++++++
T Consensus 107 ~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 107 QAIEICIEALANP-------------GANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred HHHHHHHHHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 9999998887532 47899999999999999999999999998854 357899999999998889999
Q ss_pred EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C-CCCcEEE-EcCccC-C
Q 017569 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLVKSIN-VSGHKY-G 279 (369)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~Dsi~-~~~hK~-l 279 (369)
++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+... .+.. ..+. . .....++ .|..|. +
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~~-~~~~~~~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKL------GIPIIADEIYGHMVFG--DAPF-IPMASFASIVPVLSLGGISKRWV 244 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEccccccccC--CCCc-cchhhhccCCcEEEEeecccccC
Confidence 99999999999854 89999999999 9999999999876531 1110 1111 1 1112333 357887 5
Q ss_pred CCCCCeEEEEEeCC
Q 017569 280 LVYAGVGWVVWRTK 293 (369)
Q Consensus 280 ~~p~g~g~l~~~~~ 293 (369)
....++|++++.++
T Consensus 245 ~pGlRiG~~v~~~~ 258 (403)
T TIGR01265 245 VPGWRLGWIIIHDP 258 (403)
T ss_pred CCcceEEEEEEeCc
Confidence 66688999988643
No 129
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.80 E-value=3.5e-18 Score=165.23 Aligned_cols=219 Identities=14% Similarity=0.054 Sum_probs=158.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||+. +++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.....
T Consensus 39 ~p~~~~le~~----la~l~g~~~-------a~~~~sG~~Ai~~~l~~l~~~-------------gd~Vl~~~~~y~~~~~ 94 (369)
T cd00614 39 NPTVDALEKK----LAALEGGEA-------ALAFSSGMAAISTVLLALLKA-------------GDHVVASDDLYGGTYR 94 (369)
T ss_pred ChhHHHHHHH----HHHHHCCCC-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEECCCCcchHHH
Confidence 3455666655 888888764 788899999999998887542 4689999988876543
Q ss_pred ----HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.+...|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|+++|+++ ++++++|+
T Consensus 95 ~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~------g~~livD~ 162 (369)
T cd00614 95 LFERLLPKLGIEVTFVDPD------DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH------GALLVVDN 162 (369)
T ss_pred HHHHHHhhcCeEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 445678888887754 58999999988999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. ..+ . ..++|.++.+.+|+++++.. .|+++.++++.. +.+.....+. |+ ..
T Consensus 163 t~~~~~~--~~~---~---~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~----------g~--~~ 221 (369)
T cd00614 163 TFATPYL--QRP---L---ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLAL----------GT--IL 221 (369)
T ss_pred CCcchhc--CCh---h---hhCCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhh----------CC--CC
Confidence 9986543 111 1 12789999999999976643 577777542322 2221111111 11 11
Q ss_pred HHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCcccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
....+|..++.+..... .+ +..++|++++++|++.+.+++.+
T Consensus 222 ~p~~a~~~l~~l~tl~~-r~~~~~~na~~la~~L~~~~~v~~V~ 264 (369)
T cd00614 222 SPFDAWLLLRGLKTLPL-RMERHSENALKVAEFLEKHPKVERVY 264 (369)
T ss_pred CHHHHHHHHcCCCCHHH-HHHHHHHHHHHHHHHHHcCCCccEEE
Confidence 35667777777643222 23 88999999999999998766543
No 130
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.80 E-value=3.6e-18 Score=166.58 Aligned_cols=221 Identities=11% Similarity=-0.022 Sum_probs=159.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc----c
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ----V 165 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h----~ 165 (369)
.|...+||+. ++++.|.+. .+++++|+.|+..++.++..+ +++|+++...| .
T Consensus 69 ~p~~~~le~~----lA~l~g~~~-------al~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~~~~t~~ 124 (403)
T PRK07810 69 NPTVSMFEER----LRLIEGAEA-------CFATASGMSAVFTALGALLGA-------------GDRLVAARSLFGSCFV 124 (403)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECChHHHHHHHHHHHhCC-------------CCEEEEccCCcchHHH
Confidence 3455666665 899999874 799999999998888776432 46888887544 3
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.+...++..|+++++++.+ |+++++++++++|++|++.+|+||+|.+.|+++|+++|+++ ++++++|+
T Consensus 125 ~~~~~~~~~G~~v~~vd~~------d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~------g~~vivD~ 192 (403)
T PRK07810 125 VCNEILPRWGVETVFVDGE------DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAA------GAKVVLDN 192 (403)
T ss_pred HHHHHHHHcCcEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 4556677789999888742 78999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. ..+ . ..++|.++.|++||++++.. .|+++.++ +.+...+. .+.. .. |. ..
T Consensus 193 a~a~~~~--~~~---~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~----~~---g~--~~ 251 (403)
T PRK07810 193 VFATPLL--QRG---L---PLGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMR----HT---GP--AL 251 (403)
T ss_pred CCCcccc--CCh---h---hcCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHH----Hh---CC--CC
Confidence 9985433 111 1 23789999999999976443 47666543 22211111 0100 00 11 22
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....+|..++.+..-..+-.+..++|.+++++|++++.+++-+|
T Consensus 252 s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~y 295 (403)
T PRK07810 252 SAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRY 295 (403)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEEC
Confidence 46677777776654333322899999999999999998887654
No 131
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=4.9e-18 Score=165.34 Aligned_cols=220 Identities=10% Similarity=-0.013 Sum_probs=156.5
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH-
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE- 168 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~- 168 (369)
.|...++|+. ++++.|.+. .+++++|++|+..++.++..+ +++|+++.+.|.+..
T Consensus 63 ~p~~~~le~~----lA~l~g~~~-------~i~~ssG~~Ai~~~l~all~~-------------GD~Vi~~~~~y~~~~~ 118 (398)
T PRK08249 63 NPTVQAFEEK----VRILEGAEA-------ATAFSTGMAAISNTLYTFLKP-------------GDRVVSIKDTYGGTNK 118 (398)
T ss_pred ChHHHHHHHH----HHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHH
Confidence 3455555555 899999864 688888899998888776442 478999999998643
Q ss_pred ---HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 169 ---KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 169 ---~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
..+...|+++++++. .|+++++++|+++|++|++++|+||+|.+.|+++|+++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gi~v~~vd~------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~------gi~livD~ 186 (398)
T PRK08249 119 IFTEFLPRMGVDVTLCET------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKV------GALVVVDN 186 (398)
T ss_pred HHHHHHhhCCeEEEEcCC------CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEEC
Confidence 345567888776653 478999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. .. +. ..++|.++.|++|+++++.. .|+++ .+++.. ..+....... ++ ..
T Consensus 187 t~a~~~~---~~--~l---~~~~Divv~S~sK~l~g~~~~~gG~vv-~~~~l~-~~l~~~~~~~----------g~--~~ 244 (398)
T PRK08249 187 TFATPIN---QN--PL---ALGADLVIHSATKFLSGHADALGGVVC-GSKELM-EQVYHYREIN----------GA--TM 244 (398)
T ss_pred CcCcccc---CC--ch---hhCCCEEeccCceecCCCCCceEEEEE-CCHHHH-HHHHHHHHhc----------CC--CC
Confidence 9985432 11 11 23789999999999976543 35544 443332 2211100001 11 12
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....+|..++.+..-..+..+..++|+.++++|++.+.+++-+|
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~y 288 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYY 288 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 35667777766544322211888999999999999998886654
No 132
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=9.3e-18 Score=154.47 Aligned_cols=216 Identities=17% Similarity=0.165 Sum_probs=163.2
Q ss_pred CCccccccccCC-----ChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 56 PRLNLASFVTTW-----MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 56 p~~~l~~~~~~~-----~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
|.+.++.+.|+. ..+++.+++.+++..+. ..|..+.|...-++++.+++.+-+...- ....+++|+|.++|
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl---~a~DV~ltsGC~qA 138 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKL---TADDVVLTSGCSQA 138 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCcc---CcCceEEeccchHH
Confidence 445555555542 23667788888887764 4466777888778886666554333332 22348999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHhhcCcEEEE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
+-+++.++.++ +..|++|.|+++-|...+...|++|+..++- +.+|++|++.+|.+++++|.++++
T Consensus 139 Ie~~i~~LA~p-------------~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivv 205 (447)
T KOG0259|consen 139 IELAISSLANP-------------GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVV 205 (447)
T ss_pred HHHHHHHhcCC-------------CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEE
Confidence 99999987553 4689999999999999999999999999974 456999999999999999999999
Q ss_pred eeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccccCCCCcEEEEc--CccCCCCC
Q 017569 209 ILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVS--GHKYGLVY 282 (369)
Q Consensus 209 ~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~Dsi~~~--~hK~l~~p 282 (369)
..|+||+|.+ +-+++|+++|+++ ++.++.|++|+..+++ -.|-.+ -.|. .-+-.+|.+ +.-|+-.+
T Consensus 206 iNP~NPcGnVys~~HL~kiae~A~kl------gi~vIaDEVY~~~vfg-~~pfvpmg~fs-siVPVitlggisKrW~VPG 277 (447)
T KOG0259|consen 206 INPNNPCGNVYSEDHLKKIAETAKKL------GIMVIADEVYGHTVFG-DKPFVPMGKFS-SIVPVITLGGISKRWIVPG 277 (447)
T ss_pred eCCCCCCcccccHHHHHHHHHHHHHh------CCeEEehhhcceeecC-CCCccchhhcc-ccCceEeecccccccccCC
Confidence 9999999998 5699999999999 9999999999987762 011111 1121 123344444 57788777
Q ss_pred CCeEEEEEeCCCC
Q 017569 283 AGVGWVVWRTKDD 295 (369)
Q Consensus 283 ~g~g~l~~~~~~~ 295 (369)
|..||+++.|+.-
T Consensus 278 WRlGWi~~hD~~g 290 (447)
T KOG0259|consen 278 WRLGWIALHDPRG 290 (447)
T ss_pred ceeeeEEEecccc
Confidence 9999999988643
No 133
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.9e-18 Score=166.93 Aligned_cols=220 Identities=14% Similarity=0.000 Sum_probs=164.2
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|....||+. ++++-|.+. ..++++|+.|+..++.++..+ +++|+++...|.....
T Consensus 61 nPt~~~le~~----la~LEg~~~-------a~~~~SGmaAi~~~~~~ll~~-------------GD~Vv~~~~~Yg~t~~ 116 (395)
T PRK08114 61 TLTHFSLQEA----MCELEGGAG-------CALYPCGAAAVANAILAFVEQ-------------GDHVLMTGTAYEPTQD 116 (395)
T ss_pred ChhHHHHHHH----HHHHhCCCe-------EEEEhHHHHHHHHHHHHHcCC-------------CCEEEEeCCCcHHHHH
Confidence 3566777766 888888764 788888999999888877442 4789998888766554
Q ss_pred H----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC--ceEEe
Q 017569 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD--TPIHV 243 (369)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~--~~l~v 243 (369)
. ++..|+++++++. .|.++++++|+++|++|++.+++||+|.+.|+++|+++|+++ + ++++|
T Consensus 117 l~~~~l~~~Gi~v~~vd~------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~------g~g~~lvV 184 (395)
T PRK08114 117 FCSKILSKLGVTTTWFDP------LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSV------NPDAVIMI 184 (395)
T ss_pred HHHHHHHhcCcEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHh------CCCCEEEE
Confidence 4 3557999888774 257889999999999999999999999999999999999998 5 99999
Q ss_pred ecccccccccccCCCccccccCCCCcEEEEcCccCCCCCC--CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcc
Q 017569 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~ 321 (369)
|++++.+.. +.| ...++|.+..|+|||++++. ..|+++.+ ++.. ..+.. ..+.. |.
T Consensus 185 DnT~a~p~~--~~p------l~~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~-~~l~~-~~~~~---------G~-- 242 (395)
T PRK08114 185 DNTWAAGVL--FKA------LDFGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCW-EQLRE-NSYLM---------GQ-- 242 (395)
T ss_pred ECCCccccc--cCH------HHcCCcEEEEcCcccccCCCcceeEEEEcC-HHHH-HHHHH-HHHhc---------cC--
Confidence 999986443 222 13389999999999999985 66766543 2221 11110 00110 11
Q ss_pred hhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...+...|..++.+..-.++-.++.++|..++++|++++.+++-+|
T Consensus 243 ~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~y 288 (395)
T PRK08114 243 MVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNH 288 (395)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEEC
Confidence 3347788887777766555533999999999999999999887665
No 134
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.79 E-value=1.1e-17 Score=162.94 Aligned_cols=264 Identities=14% Similarity=-0.002 Sum_probs=172.6
Q ss_pred CCCCccccccc-cCC-ChHHHHHHHHHHhccCCCCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 54 GNPRLNLASFV-TTW-MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 54 ~~p~~~l~~~~-~~~-~~~~v~~~~~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
++...+|.+.. ++. .++.+.+++.+++..+...+. ...+..++++++++++++++|.+. .+++++|++
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~-------~i~~tsG~~ 113 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED-------AILYSSCFD 113 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCc-------EEEEcChHH
Confidence 34445665544 333 457788888887765432221 234678889999999999999753 344444588
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------c
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------N 202 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~ 202 (369)
++..++.++.+ .++.|++++++|+++...++..|++++.++. +|+++|++++++ +
T Consensus 114 a~~~~~~~l~~-------------~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~~ 174 (397)
T PRK06939 114 ANGGLFETLLG-------------KEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGAR 174 (397)
T ss_pred HHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCCC
Confidence 88877766533 2478999999999999999999988776653 478888888864 6
Q ss_pred CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCC
Q 017569 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV 281 (369)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~ 281 (369)
+++|+.....+++|.+.++++|.++|+++ ++|+++|++|+.+..+........... ...+|.++.+++|++++
T Consensus 175 ~~~v~~~~v~~~~G~~~~~~~l~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g 248 (397)
T PRK06939 175 HKLIATDGVFSMDGDIAPLPEICDLADKY------DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGG 248 (397)
T ss_pred CeEEEEecCcCCCCCcCCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCc
Confidence 77777766788999999999999999999 999999999964322110000001111 23578899999999965
Q ss_pred CCCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhc
Q 017569 282 YAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~ 359 (369)
+ ..|+++.++ +.. +.+... ..+. ..++.......++..+++.+. ++-... +..++.+++++.|++.
T Consensus 249 ~-r~G~v~~~~-~~~-~~l~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 249 A-SGGYTAGRK-EVI-DWLRQRSRPYL--------FSNSLAPAIVAASIKVLELLE-ESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred c-CceEEEeCH-HHH-HHHHHhCcccc--------ccCCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHc
Confidence 5 568887643 222 222111 1111 112222222344445566553 221223 7888999999999887
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|+
T Consensus 317 ~~ 318 (397)
T PRK06939 317 GF 318 (397)
T ss_pred CC
Confidence 64
No 135
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.79 E-value=7.3e-18 Score=163.91 Aligned_cols=219 Identities=15% Similarity=0.090 Sum_probs=157.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc----h
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV----C 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~----s 166 (369)
|...+||+. +++++|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|. .
T Consensus 59 p~~~~le~~----lA~l~g~~~-------av~~~sG~~Ai~~~l~al~~~-------------Gd~Vi~~~~~y~~t~~~ 114 (391)
T TIGR01328 59 PTVSNLEGR----IAFLEGTEA-------AVATSSGMGAIAATLLTILKA-------------GDHLISDECLYGCTFAL 114 (391)
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCcchHHHHH
Confidence 455666666 899999875 688999999998888776432 468999988664 3
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+...|+.++.++++ |+++++++++++|++|++.+|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 115 ~~~~~~~~G~~~~~vd~~------d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~------gi~livD~a 182 (391)
T TIGR01328 115 LEHALTKFGIQVDFINMA------IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQ------GVKVIVDNT 182 (391)
T ss_pred HHHHHhcCCeEEEEECCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 455566789888888764 68999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchh
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~ 323 (369)
|+.+.. ..+ . ..++|.++.|++|+++++.+ .|+++ .+++... .+.. ...... |. ..
T Consensus 183 ~a~~~~--~~~---~---~~g~Divv~S~sK~lgg~g~~~gG~v~-~~~~li~-~l~~~~~~~~~---------g~--~l 241 (391)
T TIGR01328 183 FATPML--TNP---V---ALGVDVVVHSATKYIGGHGDVVAGLIC-GKAELLQ-QIRMVGIKDMT---------GS--VI 241 (391)
T ss_pred Cchhcc--CCc---h---hcCCCEEEccccccccCCCCceEEEEE-cCHHHHH-HHHHHHHHhCC---------CC--CC
Confidence 975432 111 1 23799999999999987664 46554 4443331 1111 001010 11 12
Q ss_pred HHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....+|..++.+..-..+ + +..++|++++++|++.+.++.-+|
T Consensus 242 ~~~~a~l~l~~L~tl~~r-~~~~~~na~~la~~L~~~p~v~~v~y 285 (391)
T TIGR01328 242 SPFDAWLILRGLKTLNIR-MKRHSENAMKVAEYLKSHPAVEKVYY 285 (391)
T ss_pred CcHHHHHHHhCcCcHHHH-HHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 345566666655432222 3 889999999999999988776543
No 136
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=5.2e-18 Score=164.38 Aligned_cols=219 Identities=15% Similarity=0.016 Sum_probs=157.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|...+||+. ++++.|.+. +++++||++|+..++.++..+ +++|+++.+.|......
T Consensus 51 p~~~~le~~----lA~l~g~~~-------v~~~~gg~~Ai~~~l~all~~-------------GD~Vl~~~p~y~~~~~~ 106 (382)
T TIGR02080 51 PTRDLLQQA----LAELEGGAG-------AVVTNTGMSAIHLVTTALLGP-------------DDLLVAPHDCYGGTYRL 106 (382)
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHH
Confidence 344555554 888888543 899999999999988887442 47899999999754433
Q ss_pred H-hhh---cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 A-RYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ~-~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ .+. |+.+..++ . .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 107 ~~~~~~~~~~~v~~~d--~----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~------g~~vvvD~a 174 (382)
T TIGR02080 107 LNALAKKGCFRVLFVD--Q----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAV------GAVVVVDNT 174 (382)
T ss_pred HHHHHhhcCeEEEEEC--C----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 222 44554443 1 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|..+.. .. .+ ..++|.++.+++||++++.+ .|+++.++++.. +.+.....+.+. ...
T Consensus 175 ~~~~~~--~~-----pl-~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~-~~l~~~~~~~g~------------~~s 233 (382)
T TIGR02080 175 FLSPAL--QN-----PL-ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVA-EELAWWANNLGV------------TGG 233 (382)
T ss_pred Cccccc--CC-----ch-hhCCCEEEeecceeccCCCCceeEEEEeCCHHHH-HHHHHHHHccCC------------CCC
Confidence 975432 11 11 12689999999999988776 677777655432 221111111111 123
Q ss_pred HHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
++..|..++.+..-..+ + ++.++|..++++|++.+.+++-+|
T Consensus 234 p~~a~l~lr~l~tl~~R-~~~~~~na~~~a~~L~~~p~v~~V~y 276 (382)
T TIGR02080 234 AFDSYLTLRGLRTLVAR-MRLQQRNAQAIVEYLQTQPLVKKIYY 276 (382)
T ss_pred HHHHHHHHcccchHHHH-HHHHHHHHHHHHHHHHhCCCeeEEEC
Confidence 66778777766544444 3 888999999999999998876554
No 137
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=4.9e-18 Score=165.13 Aligned_cols=217 Identities=15% Similarity=0.082 Sum_probs=154.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...++|+. +++++|.+. .+++++|+.|+..++. +.. .+++|+++.+.|.+
T Consensus 54 p~~~~le~~----lA~l~g~~~-------~v~~~sG~~ai~~~l~-~l~-------------~Gd~Vlv~~~~y~~~~~~ 108 (390)
T PRK08064 54 PTREALEDI----IAELEGGTK-------GFAFASGMAAISTAFL-LLS-------------KGDHVLISEDVYGGTYRM 108 (390)
T ss_pred hhHHHHHHH----HHHHhCCCC-------eEEECCHHHHHHHHHH-HhC-------------CCCEEEEccCccchHHHH
Confidence 445555554 899999874 4666777888876664 322 14689999988864
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...++..|++++.++++ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 109 ~~~~~~~~G~~v~~v~~~------d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~------g~~vvvD~a 176 (390)
T PRK08064 109 ITEVLSRFGIEHTFVDMT------NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAI------GCLTFVDNT 176 (390)
T ss_pred HHHHHHHcCCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHc------CCEEEEECC
Confidence 334556689999998863 68999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. ..+ . ..++|.++.++|||++++.+ .|++++++++.. +.+.. ... .+ |. ...
T Consensus 177 ~~~~~~--~~~---~---~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~-~~l~~----~~~---~~---g~--~~~ 235 (390)
T PRK08064 177 FLTPLL--QKP---L---DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELA-QKLYF----LQN---SF---GA--VLG 235 (390)
T ss_pred CCcccc--cCc---h---hhCCcEEEeecceeccCCccceeEEEEeCCHHHH-HHHHH----HHH---hc---CC--CCC
Confidence 876432 111 1 23789999999999988887 488887654332 12110 000 00 00 112
Q ss_pred HHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+...|..++.+. .+..+ +..+++..+++.|++++.+++.++
T Consensus 236 ~~~a~l~~~gl~--tl~~R~~~~~~~a~~la~~L~~~~~v~~v~y 278 (390)
T PRK08064 236 VQDCWLVLRGLK--TLHVRLEHSSETANKIALYLQEHPKVQNVYY 278 (390)
T ss_pred HHHHHHHHcccC--cHHHHHHHHHHHHHHHHHHHhcCCCcceEEC
Confidence 345555444333 34333 889999999999999998877654
No 138
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.2e-17 Score=163.86 Aligned_cols=232 Identities=13% Similarity=0.031 Sum_probs=160.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--- 166 (369)
.|....||+. ++++.|.+. .+++++|+.|+..++.++..+ +++|+++.+.|..
T Consensus 63 ~p~~~~Le~~----lA~leg~~~-------al~~~sG~~Ai~~al~~ll~~-------------GD~Vlv~~~~y~~t~~ 118 (431)
T PRK08248 63 NPTTDVFEKR----IAALEGGIG-------ALAVSSGQAAITYSILNIASA-------------GDEIVSSSSLYGGTYN 118 (431)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCchhhHHH
Confidence 4556666666 899999764 799999999999988876442 4789999987754
Q ss_pred -HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
+...++..|++++++++. |++++++++++++++|++++++||+|.+.|+++|+++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gv~v~~vd~~------d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~------gi~vIvD~ 186 (431)
T PRK08248 119 LFAHTLPKLGITVKFVDPS------DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEH------GIPLIVDN 186 (431)
T ss_pred HHHHHHHhCCEEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEeC
Confidence 345566789999888753 78999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCCCCccc---c---cc-cccCccCCCC-C----
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPD---E---LV-FHINYLGSDQ-P---- 312 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~---~---~~-~~~~y~~~~~-~---- 312 (369)
+++.+.. . ..+ ..++|.++.++|||+++|. ..|.+++.+.+.... . +. ....|..... .
T Consensus 187 t~a~~~~---~----~pl-~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (431)
T PRK08248 187 TFASPYL---L----RPI-EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGE 258 (431)
T ss_pred CCCcccc---C----Chh-HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhch
Confidence 9874321 1 111 2489999999999998775 356666643321100 0 00 0011100000 0
Q ss_pred -C---------ccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 313 -T---------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 313 -~---------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
. ....| ....+..+|..++.+..-..+-.++.++|..++++|++++.+++-+|
T Consensus 259 ~~~~~~~~~~~~~~~G--~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~y 321 (431)
T PRK08248 259 AAYITKARVQLLRDLG--AALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSY 321 (431)
T ss_pred hhHHHHHHHHHHHhcC--CCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 0 00002 12235566666655544333322999999999999999999886554
No 139
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.79 E-value=7.2e-18 Score=164.50 Aligned_cols=224 Identities=15% Similarity=0.063 Sum_probs=160.7
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 017569 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (369)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~ 168 (369)
..|...+||++ +++++|.+. .++++||+.|+..++.++.++ +++|+++.+.|.+..
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~~-------~l~~~sG~~Ai~~al~~ll~~-------------Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGEA-------AVVAASGMGAISSSLWSALKA-------------GDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHH
Confidence 34677778777 788888653 789999999998888776542 468999998776533
Q ss_pred ----HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 169 ----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 169 ----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
..++..|+++++++.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|++++. ++++++|
T Consensus 118 ~~~~~~~~~~G~~v~~vd~~------d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~----~i~livD 187 (400)
T PRK06234 118 ALLNHGLTRYGVEVTFVDTS------NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNK----ECLVFVD 187 (400)
T ss_pred HHHHHHHhhCCeEEEEECCC------CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCC----CCEEEEE
Confidence 4456789888888753 7899999999999999999999999999999999999999511 8999999
Q ss_pred cccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcc
Q 017569 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~ 321 (369)
++|+.+.. .. +. ..++|.++.|++|+++++.. .|+++.++ +.. +.+.. ...+. + | .
T Consensus 188 ea~~~~~~--~~---~l---~~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~-~~l~~~~~~~~------~---g--~ 246 (400)
T PRK06234 188 NTFCTPYI--QR---PL---QLGADVVVHSATKYLNGHGDVIAGFVVGKE-EFI-NQVKLFGIKDM------T---G--S 246 (400)
T ss_pred CCCCchhc--CC---ch---hhCCcEEEeeccccccCCCCceeEEEEecH-HHH-HHHHHHHHHHh------c---C--C
Confidence 99986543 11 11 12789999999999976643 47777654 222 22210 00100 0 1 1
Q ss_pred hhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...+...|..++.+..-..+-.+..++|++++++|++.+.+++.+|
T Consensus 247 ~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~ 292 (400)
T PRK06234 247 VIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYY 292 (400)
T ss_pred CCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 2235666777776654333222788999999999999998876554
No 140
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.79 E-value=9.1e-18 Score=160.98 Aligned_cols=243 Identities=12% Similarity=0.027 Sum_probs=157.9
Q ss_pred HHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 017569 74 KLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (369)
Q Consensus 74 ~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 153 (369)
+++.+.+..... ...+...++|+. +++++|.+. .+++++|++|+..++.++... .
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~----la~~~~~~~-------~~~~~sgt~al~~~l~~l~~~------------~ 57 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKA----FAEYLGVKY-------AVAVSSGTAALHLALRALGIG------------P 57 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC------------C
Confidence 344555555433 234555556555 888888753 788899999999888876311 2
Q ss_pred CCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhh
Q 017569 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNE 233 (369)
Q Consensus 154 ~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~ 233 (369)
+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|+++ +++|.+.|+++|.++|+++
T Consensus 58 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~-- 132 (352)
T cd00616 58 GDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPV---HLYGNPADMDAIMAIAKRH-- 132 (352)
T ss_pred CCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCCHHHHHHHHHHc--
Confidence 46899999999999999999999999999987458999999999998889888865 4689999999999999999
Q ss_pred ccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc--CccCCCCCCCeEEEEEeCCCCccccccc--ccCccCC
Q 017569 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKDDLPDELVF--HINYLGS 309 (369)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~--~~~y~~~ 309 (369)
++++++|++++.+... ... ... ...|..++| .|||+.++. .|+++.++++... .+.. ...+...
T Consensus 133 ----~i~li~D~a~~~g~~~--~~~---~~~-~~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~-~~~~~~~~~~~~~ 200 (352)
T cd00616 133 ----GLPVIEDAAQALGATY--KGR---KVG-TFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAE-RARLLRNHGRDRD 200 (352)
T ss_pred ----CCeEEEECCCCCCCeE--CCE---Ecc-cCcceeEEcCCCCCCCcccC-ceEEEECCHHHHH-HHHHHHHcCCCCC
Confidence 9999999999865431 110 011 123555555 559995444 3667776544321 1110 0000000
Q ss_pred CC-CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 310 DQ-PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 310 ~~-~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ......+.......+.....+. ..+++.++ +..++++++++.|++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~ 252 (352)
T cd00616 201 RFKYEHEILGYNYRLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLP 252 (352)
T ss_pred CCccccceeeeccCcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 00 0000001111112233333332 23445555 78899999999999864
No 141
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=1.6e-17 Score=162.56 Aligned_cols=264 Identities=11% Similarity=0.004 Sum_probs=174.4
Q ss_pred CChHHHHHHHHHHhcc-CC-C-----CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK-NY-V-----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~-n~-~-----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
..++.+.+++...+.+ .. + +|.......++|..+.+...++||++.. .+=..+|+.||+.++.++..
T Consensus 60 ~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a------nvqp~Sg~~An~~v~~all~ 133 (493)
T PRK13580 60 YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHA------YVQPHSGADANLVAFWAILA 133 (493)
T ss_pred cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcc------cccCCCcHHHHHHHHHHHhc
Confidence 3457777777655533 11 1 1122235789999999999999999862 34445889999999998875
Q ss_pred H----------------------HHHHHHhcCCCCCCCeEEec---CCCcchHHHHHhhhc--ceeEEEeccCCccccCH
Q 017569 140 K----------------------WQQKRKEQGKPYDKPNIVTG---ANVQVCWEKFARYFE--VELKEVKLEEGYYVMNP 192 (369)
Q Consensus 140 ~----------------------~~~~~~~~g~~~~~~~Vi~s---~~~h~s~~~~~~~~G--~~v~~v~~~~~~~~~d~ 192 (369)
+ |.+-|+. ..+++|+.- .-.|.+........| ..++..+++++++.+|+
T Consensus 134 ~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~----~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~ 209 (493)
T PRK13580 134 HKVESPALEKLGAKTVNDLTEEDWEALRAE----LGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDY 209 (493)
T ss_pred ccccCcchhccccccccccchhhhhhhhcc----CCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCH
Confidence 3 1111111 114566543 223433322233334 45666777765689999
Q ss_pred HHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCCCcEE
Q 017569 193 VKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSI 271 (369)
Q Consensus 193 ~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Dsi 271 (369)
+++++.+.++++.|+++..++. |.+.|+++|+++|+++ +++++||+|++.+.++. ...+... ...++|++
T Consensus 210 d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~------gA~L~VD~AH~~Gligg--~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 210 DEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV------GAVLMVDMAHFAGLVAG--KVFTGDEDPVPHADIV 280 (493)
T ss_pred HHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc------CCEEEEECchhhceecc--ccchhhcCCCCCCcEE
Confidence 9999999999889898988888 5577999999999999 99999999999887641 1111011 13479999
Q ss_pred EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHH
Q 017569 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHK 349 (369)
Q Consensus 272 ~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a 349 (369)
+.++||++.+|.| |++++++. .. +.+....+|+. ++.....+++...+++.+...+++++ +..+|+
T Consensus 281 tgT~hKaL~GP~G-G~I~~~~~-l~-~~L~~a~P~i~---------gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na 348 (493)
T PRK13580 281 TTTTHKTLRGPRG-GLVLAKKE-YA-DAVDKGCPLVL---------GGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNA 348 (493)
T ss_pred EeCChhhccCCCe-EEEEecHH-HH-HHHhhCCCccc---------CCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 9999999988886 77777642 21 22211112222 22222234555556666654555544 999999
Q ss_pred HHHHHHHHhcCC
Q 017569 350 KLSSFFVIHSSY 361 (369)
Q Consensus 350 ~~l~~~L~~~g~ 361 (369)
++|++.|++.||
T Consensus 349 ~~La~~L~~~G~ 360 (493)
T PRK13580 349 RALAEGFLKRGA 360 (493)
T ss_pred HHHHHHHHhcCC
Confidence 999999999997
No 142
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.78 E-value=9e-18 Score=160.86 Aligned_cols=253 Identities=17% Similarity=0.077 Sum_probs=168.8
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.++ ++++.+.+++.+++... ..|. .+...+++ +.+++++|+++ ...++|+|+++++..++.+
T Consensus 22 i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~y~-~~~~~~lr----~~ia~~~~~~~-----~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 22 IKLNSNENPFGPPPKAKEALRAEADKL-HRYP-DPDPAELK----QALADYYGVDP-----EQILLGNGSDEIIELLIRA 90 (346)
T ss_pred EEccCCCCCCCCCHHHHHHHHHhHHHh-hcCC-CCCHHHHH----HHHHHHhCcCh-----HHEEEcCCHHHHHHHHHHH
Confidence 445544432 44577888888776432 2332 23334444 44788888765 2488999999999877776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+.++ +++|++++++|..+...++..|++++.+|++++ +.+|++++++++++++++|+++.++||||
T Consensus 91 l~~~-------------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~l~~p~NptG 156 (346)
T TIGR01141 91 FLEP-------------GDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED-GQLDLEDILVAIDDKPKLVFLCSPNNPTG 156 (346)
T ss_pred hcCC-------------CCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC-CCCCHHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 6431 478999999998888888999999999999875 88999999999888899999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEeCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKD 294 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~ 294 (369)
.+.|++++.++|+.+. .++++++|++|+.+.. .....+. ....-..+..+.+|+++ .+.++|+++.++ +
T Consensus 157 ~~~~~~~~~~l~~~~~----~~~~ii~D~~y~~~~~----~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~ 227 (346)
T TIGR01141 157 NLLSRSDIEAVLERTP----EDALVVVDEAYGEFSG----EPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA-E 227 (346)
T ss_pred CCCCHHHHHHHHHhCC----CCcEEEEECchhhhcC----CccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH-H
Confidence 9999999999998752 1899999999985332 1001111 11122344567899984 445689998742 2
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhc
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.. +.+.... ..+. . ..+.+.++...+... .+.+. +..++.+++++.|++.
T Consensus 228 ~~-~~~~~~~-------~~~~--~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 228 II-DALNKVR-------APFN--L-----SRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred HH-HHHHhcc-------CCCC--C-----CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 2221100 0110 1 123344444444332 34444 7788888999999876
No 143
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.78 E-value=4.1e-17 Score=163.16 Aligned_cols=200 Identities=12% Similarity=0.020 Sum_probs=150.4
Q ss_pred HHHHHHHHHHhcc---CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH-HHHHHHH
Q 017569 70 PECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQKR 145 (369)
Q Consensus 70 ~~v~~~~~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~~ 145 (369)
..+.+.+.++++. ....|....+..++++++.+++.+..|.+.+. ..+++|+|+++++.+++.++. ++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~~----- 162 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP---SDIFLTDGASSGIKLLLQLLIGDP----- 162 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHHHHHHhccCC-----
Confidence 3455555555543 23446666789999999999999888876532 458999999999999988875 32
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccC
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (369)
++.|+++.|+|+.+...++..|+.++.+|+++ ++|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 163 --------gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 163 --------SDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred --------CCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 47899999999999999999999999999975 4579999999999975 78889999999999999
Q ss_pred CC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-----cccCC---CCcEEEE-cCccC--CCCCCC
Q 017569 219 ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-----DFRLP---LVKSINV-SGHKY--GLVYAG 284 (369)
Q Consensus 219 ~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-----~~~~~---~~Dsi~~-~~hK~--l~~p~g 284 (369)
.+ +++|+++|+++ ++|+++|.+|+...+.--.+...+ .+... ....+++ +.-|. .+++++
T Consensus 235 ~s~e~~~~i~~~a~~~------~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlR 308 (481)
T PTZ00377 235 LTRDVMEEIIKFCYEK------GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRR 308 (481)
T ss_pred CCHHHHHHHHHHHHHC------CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCc
Confidence 66 88999999999 999999999987543100010010 11100 1124444 57895 336899
Q ss_pred eEEEEEe
Q 017569 285 VGWVVWR 291 (369)
Q Consensus 285 ~g~l~~~ 291 (369)
+|++++.
T Consensus 309 iG~~~~~ 315 (481)
T PTZ00377 309 GGYFELT 315 (481)
T ss_pred eEEEEEe
Confidence 9999873
No 144
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=3.4e-18 Score=145.82 Aligned_cols=164 Identities=18% Similarity=0.054 Sum_probs=129.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH-HHHhhhcce
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-KFARYFEVE 177 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~-~~~~~~G~~ 177 (369)
+++++++++++.+. ..+++++||++|+.+++.+++.. +.+|+++.+.|.+.. ..+...|++
T Consensus 4 ~~~~~l~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~g~~ 65 (170)
T cd01494 4 ELEEKLARLLQPGN-----DKAVFVPSGTGANEAALLALLGP-------------GDEVIVDANGHGSRYWVAAELAGAK 65 (170)
T ss_pred HHHHHHHHHcCCCC-----CcEEEeCCcHHHHHHHHHHhCCC-------------CCEEEEeecccceehhhHHHhcCCE
Confidence 56677999996433 34899999999999999987542 368999999998887 788889999
Q ss_pred eEEEeccCCc-cccCHHHHHHHH-hhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 178 LKEVKLEEGY-YVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 178 v~~v~~~~~~-~~~d~~~L~~~i-~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
++.++.+.+. ...+.+.+++.. .+++++++++.+++++|...|+++|.++|+++ ++++|+|++|+++..+..
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~------~~~li~D~a~~~~~~~~~ 139 (170)
T cd01494 66 PVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY------GILLLVDAASAGGASPAP 139 (170)
T ss_pred EEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc------CCEEEEeccccccccccc
Confidence 9999987532 223333555443 46789999999999999999999999999999 999999999998765211
Q ss_pred CCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 256 ~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
. .+....++|.++.++|||+++ +++|++++|
T Consensus 140 --~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 140 --G--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred --c--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 1 123345799999999999977 789999875
No 145
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.78 E-value=5.6e-17 Score=157.94 Aligned_cols=215 Identities=9% Similarity=-0.058 Sum_probs=158.7
Q ss_pred cCCCCccccccccCCC-hHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHH
Q 017569 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 53 ~~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (369)
.++..++|+.+.+..+ ++.+.+++.+.+... ...|....+..+|++++.+|+.+..|.+.+. +..+++|+|+++++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~Gs~~al 105 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP--ETEVLPLIGSQEGT 105 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC--cCeEEECCCcHHHH
Confidence 3444566666555433 567788887776532 3445556788999999999999888865421 11478899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEe
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
.+++.++.++ ++.|++++|+|+.+...++..|++++.+|+++ +.+.+|++++++.+.+++++|+++
T Consensus 106 ~~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 172 (388)
T PRK07366 106 AHLPLAVLNP-------------GDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLS 172 (388)
T ss_pred HHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEe
Confidence 9888876542 47899999999999999999999999999974 347889999998888889999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cC-CCCc--EEEEcCccCC-CC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL-PLVK--SINVSGHKYG-LV 281 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~-~~~D--si~~~~hK~l-~~ 281 (369)
.|+||||.+.+ +++|+++|+++ ++||++|.+|..+... .......+ .. ..-+ .++.+.-|.+ ..
T Consensus 173 ~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 173 YPHNPTTAIAPLSFFQEAVAFCQQH------DLVLVHDFPYVDLVFD--GEVEPPSILQADPEKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEecchhhcccC--CCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 99999999854 67788899999 9999999999876531 11100111 11 1111 2345688987 47
Q ss_pred CCCeEEEEE
Q 017569 282 YAGVGWVVW 290 (369)
Q Consensus 282 p~g~g~l~~ 290 (369)
...+|+++.
T Consensus 245 GlRiG~~v~ 253 (388)
T PRK07366 245 GFRIGFAIG 253 (388)
T ss_pred chhheehcC
Confidence 788999985
No 146
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.5e-17 Score=159.15 Aligned_cols=210 Identities=12% Similarity=0.039 Sum_probs=154.1
Q ss_pred ccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.+..+ ++.+.+.+.+.+......|....+..++++++++++.+.+|.+.+. ...++|+|+++|+..++.+
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 32 IDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR---NEIMATVGACHGMYLALQS 108 (384)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh---hhEEEcCChHHHHHHHHHH
Confidence 45555444433 3455544434333344455556677899999999998887776432 3589999999999998888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+..+ ++.|+++.++|..+..+++.+|..++.+|++ ++++.+|+++|++++++++++|+++.|+|||
T Consensus 109 ~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 175 (384)
T PRK06348 109 ILDP-------------GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPT 175 (384)
T ss_pred hcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCC
Confidence 7542 4689999999999999999999999889874 3457899999999998889999999999999
Q ss_pred ccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cccc-CCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 216 G~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|.+. .+++|.++|+++ ++++++|.+|+.+... .+..+ ..+. ...-..+..+.-|.++ ...++|+++
T Consensus 176 G~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEY------DLFIISDEVYDGFSFY--EDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred CcCCCHHHHHHHHHHHHHC------CeEEEEecccccceeC--CCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 9985 478899999999 9999999999976531 11001 1111 1111234456789876 678899998
Q ss_pred Ee
Q 017569 290 WR 291 (369)
Q Consensus 290 ~~ 291 (369)
..
T Consensus 248 ~~ 249 (384)
T PRK06348 248 AP 249 (384)
T ss_pred cC
Confidence 74
No 147
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.78 E-value=1.3e-17 Score=162.72 Aligned_cols=220 Identities=13% Similarity=0.057 Sum_probs=155.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...++|+. +++++|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|..
T Consensus 65 p~~~~le~~----lA~l~g~~~-------~i~~~sG~~Al~~~l~~ll~~-------------Gd~Viv~~~~y~~t~~~ 120 (403)
T PRK07503 65 PTLALLEQR----MASLEGGEA-------AVALASGMGAITATLWTLLRP-------------GDEVIVDQTLYGCTFAF 120 (403)
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEccCccchHHHH
Confidence 455566655 899999875 678888999998887765331 4689999887754
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+...|++++.++++ |+++|+++++++|++|++.+|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 121 ~~~~~~~~G~~v~~vd~~------d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~------gi~lIvD~a 188 (403)
T PRK07503 121 LHHGLGEFGVTVRHVDLT------DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGA------GAKVVVDNT 188 (403)
T ss_pred HHHHHhhCCEEEEEeCCC------CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHc------CCEEEEECC
Confidence 334556779888888763 68999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. .. +.. .++|.++.|++||++++.+ .|+++ .+++.. ..+.. ..+. .. .|.+ ..
T Consensus 189 ~a~~~~---~~--~l~---~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~-~~l~~-~~~~----~~---~g~~--~s 248 (403)
T PRK07503 189 YCTPYL---QR--PLE---LGADLVVHSATKYLGGHGDITAGLVV-GGKALA-DRIRL-EGLK----DM---TGAV--MS 248 (403)
T ss_pred Cccccc---CC--chh---hCCCEEEccccccccCCCceeEEEEE-cCHHHH-HHHHh-hhHH----hC---cCCC--CC
Confidence 975432 11 111 3789999999999987643 67776 444322 12110 0000 00 0111 23
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCcccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
.+.+|..++.+..-..+..+..++|+.++++|++.+.++.-+
T Consensus 249 ~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~ 290 (403)
T PRK07503 249 PFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVH 290 (403)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 566677777664332221277799999999999998877543
No 148
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=3.7e-17 Score=160.29 Aligned_cols=278 Identities=14% Similarity=0.065 Sum_probs=172.8
Q ss_pred HHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHh-ccCCCCCCC------CcchHHHHHHHHHHHHHHhCCCC
Q 017569 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDMDE------YPVTTELQNRCVNMIAHLFNTPV 112 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~-~~n~~~~~~------~~~~~~le~~~~~~la~l~g~~~ 112 (369)
.++.+.+++..... +..+|+..- -+..+|.+.+++...+ +.....+.. .+...+||+-+.+.+++++|.+.
T Consensus 14 ~~~~~~~~~~~~~~-~~~~~l~~s-en~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~ 91 (416)
T PRK13034 14 DEVFAAINKELERQ-QDHLELIAS-ENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY 91 (416)
T ss_pred HHHHHHHHHHHHHH-hcCeeeccc-ccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc
Confidence 45666655544322 333443221 1234688888888774 443222111 24567777766778999999985
Q ss_pred CCCCCCCe-EEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch-HHHHHhh--hccee--EEEeccCC
Q 017569 113 ADDKTAVG-VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFARY--FEVEL--KEVKLEEG 186 (369)
Q Consensus 113 ~~~~~~~~-~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s-~~~~~~~--~G~~v--~~v~~~~~ 186 (369)
. +++++|+.||..++.++..+ +++|+++...|.+ +...++. .+... +.++++..
T Consensus 92 -------alv~~~SG~~A~~~~l~al~~~-------------GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (416)
T PRK13034 92 -------ANVQPHSGSQANGAVYLALLKP-------------GDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL 151 (416)
T ss_pred -------eEEecCCcHHHHHHHHHHhcCC-------------CCEEEEcCccceeeeecCCcceeccceeeeEEcccccc
Confidence 4 45689999999998887442 5799999999976 3322322 12222 34555544
Q ss_pred ccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC
Q 017569 187 YYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (369)
Q Consensus 187 ~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (369)
++.+|+++|++.+.. ++++|++.. +.+|..-|+++|.++|+++ ++++++|+|++.+... .+... ...
T Consensus 152 ~~~~d~~~le~~l~~~~~klVi~~~--~~~g~~~dl~~l~~la~~~------g~~livD~Aha~G~~~--~g~~~--~~~ 219 (416)
T PRK13034 152 TGLIDYDEVEELAKEHKPKLIIAGF--SAYPRELDFARFREIADEV------GALLMVDMAHIAGLVA--AGEHP--NPF 219 (416)
T ss_pred cCCcCHHHHHHHHhhcCCeEEEECC--CccccccCHHHHHHHHHHc------CCEEEEeCcccccCcc--cCCCC--CCC
Confidence 578999999999854 677776543 3467888999999999999 9999999999877652 22111 113
Q ss_pred CCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHH-H-
Q 017569 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPS-F- 343 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~-~- 343 (369)
..+|.++.++|||+.+|.| |+++.+++... ..+ ....|.+ +..+......+++..++...-..+..+ .
T Consensus 220 ~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~~-~~~~~~~-------~~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 220 PHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KKI-NSAVFPG-------LQGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCceEEEEeCcccCCCCCC-eEEEECcHHHH-HHH-HhhcCCc-------ccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 4699999999999988887 56665543221 111 1111111 011121222333333444432223333 3
Q ss_pred HhhHHHHHHHHHHHhcCC
Q 017569 344 CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 344 ~~~~~a~~l~~~L~~~g~ 361 (369)
+..+++++|+++|++.|+
T Consensus 290 ~l~~~a~~l~~~L~~~G~ 307 (416)
T PRK13034 290 QVIANAQALAEVLKERGY 307 (416)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 999999999999998875
No 149
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.78 E-value=2.2e-17 Score=160.50 Aligned_cols=219 Identities=13% Similarity=0.069 Sum_probs=154.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||+. +++++|.+. .+++++|+.|+..++.++..+ +++|+++.+.|.....
T Consensus 60 ~pt~~~Le~~----lA~l~G~~~-------al~~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~~~y~~~~~ 115 (386)
T PRK06767 60 NPTVKLFEER----MAVLEGGEE-------ALAFGSGMAAISATLIGFLKA-------------GDHIICSNGLYGCTYG 115 (386)
T ss_pred CcchHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHH
Confidence 3556666666 899999764 677888899988877776442 4789999988766444
Q ss_pred HH----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.. ...|+++..++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 116 ~~~~~~~~~gi~~~~~~~------~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~------g~~vivD~ 183 (386)
T PRK06767 116 FLEVLEEKFMITHSFCDM------ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRN------GLLVIVDN 183 (386)
T ss_pred HHHHHHhhcCeEEEEeCC------CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHc------CCEEEEEC
Confidence 33 334665555543 378999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. .. .+ ..++|.++.+++|+++++.. .|+++.+++ .+...........+ +. .
T Consensus 184 a~a~~~~---~~----pl-~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g----------~~--~ 242 (386)
T PRK06767 184 TFCSPYL---QR----PL-ELGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIG----------GI--M 242 (386)
T ss_pred CCccccc---CC----ch-hcCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhC----------CC--C
Confidence 9974332 11 11 23789999999999977654 477776543 22111100001111 11 1
Q ss_pred HHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCcccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
..+.+|..++.+..-.. .+ +..+++++++++|++++.++...
T Consensus 243 ~~~~a~l~~~~L~tl~~-r~~~~~~~a~~la~~L~~~p~v~~v~ 285 (386)
T PRK06767 243 APFDAWLLLRGLKTLAV-RMDRHCDNAEKIVSFLKNHDAVEGVW 285 (386)
T ss_pred CHHHHHHHHcCCCcHHH-HHHHHHHHHHHHHHHHHcCCCccEEE
Confidence 24556776666654333 23 88999999999999999887654
No 150
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=8.8e-18 Score=162.59 Aligned_cols=219 Identities=16% Similarity=0.040 Sum_probs=153.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch-HH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WE- 168 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s-~~- 168 (369)
|...+||+. ++++.|.+. .+++++|+.++..++ .+.. .+++|+++.+.|.+ +.
T Consensus 50 p~~~~Le~~----lA~l~g~~~-------~~~~~sG~aai~~~~-~~l~-------------~Gd~Viv~~~~y~~~~~~ 104 (377)
T PRK07671 50 PTRAALEEL----IAVLEGGHA-------GFAFGSGMAAITAVM-MLFS-------------SGDHVILTDDVYGGTYRV 104 (377)
T ss_pred hHHHHHHHH----HHHHhCCCc-------eEEeCCHHHHHHHHH-HHhC-------------CCCEEEECCCccchHHHH
Confidence 344555554 999999874 466777777765443 3322 14689999998874 33
Q ss_pred --HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 169 --KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 169 --~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
..+..+|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 105 ~~~~~~~~G~~v~~v~~------~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~------g~~lvvD~a 172 (377)
T PRK07671 105 MTKVLNRFGIEHTFVDT------SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK------GLLTIVDNT 172 (377)
T ss_pred HHHHHhcCCeEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 234456888888763 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.... .. +. ..++|.++.+++||+++|.+ .|++++++++.. ..+.....+.+. ...
T Consensus 173 ~~~~~~---~~--p~---~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~-~~~~~~~~~~g~------------~~~ 231 (377)
T PRK07671 173 FMTPYW---QS--PI---SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELA-EDLHFVQNSTGG------------ILG 231 (377)
T ss_pred CCcccc---CC--hh---hhCCeEEEecCcccccCCccceeEEEEeCcHHHH-HHHHHHHHhhcC------------CCC
Confidence 975332 11 11 23789999999999988864 576776654332 221111111111 123
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....|..++.+..-+.+..+..++|+.++++|++.+.+++-+|
T Consensus 232 ~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~ 274 (377)
T PRK07671 232 PQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYY 274 (377)
T ss_pred HHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 5667777776655444322888999999999999987766543
No 151
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.78 E-value=5.3e-17 Score=145.86 Aligned_cols=260 Identities=14% Similarity=0.090 Sum_probs=191.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
..+.+.+.++++.|...+ .+|....+.+++.+-+...|..... ..-++..+|+.+.-.++..+..+
T Consensus 26 snl~~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~----~tf~isgsGh~g~E~al~N~leP--------- 91 (385)
T KOG2862|consen 26 SNLSGRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANA----QTFVISGSGHSGWEAALVNLLEP--------- 91 (385)
T ss_pred cCCCHHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCC----ceEEEecCCcchHHHHHHhhcCC---------
Confidence 345556677777776554 5788888999999999999888752 23455556677776666665542
Q ss_pred CCCCCCeEEecCCC-c-chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCC-HHHHH
Q 017569 150 KPYDKPNIVTGANV-Q-VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-VKLLH 225 (369)
Q Consensus 150 ~~~~~~~Vi~s~~~-h-~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~-l~~I~ 225 (369)
+++|++-... | ..+...++.+|++|..|+.+.. ....++.+++++.+ ++++|+++++.+.||...| ++.+.
T Consensus 92 ----gd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G-~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g 166 (385)
T KOG2862|consen 92 ----GDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIG-QAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISG 166 (385)
T ss_pred ----CCeEEEEEechHHHHHHHHHHhhCceeeEEecCcc-cCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHH
Confidence 3555543333 2 2355677889999999988764 68899999999987 6799999999999999998 77888
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc--------c
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL--------P 297 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~--------~ 297 (369)
++|++| +.+++||++.+.+..+| .++.-++|..-..++|.+++|.|.+.++++++... +
T Consensus 167 ~lc~k~------~~lllVD~VaSlggt~F-------~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~ 233 (385)
T KOG2862|consen 167 ELCHKH------EALLLVDTVASLGGTEF-------EMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKP 233 (385)
T ss_pred HHhhcC------CeEEEEechhhcCCccc-------eehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCc
Confidence 999999 99999999877655543 33344889988899999999999999887665221 0
Q ss_pred cccccccC----ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 298 DELVFHIN----YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 298 ~~~~~~~~----y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
..++++.. |.+-+..--....|.+.....++-++|..+-+||+.+. |+.+++++|+..|+++|+
T Consensus 234 ~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GL 303 (385)
T KOG2862|consen 234 VSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGL 303 (385)
T ss_pred eEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 11222221 11111100112357777778899999999999999999 999999999999999775
No 152
>PRK05939 hypothetical protein; Provisional
Probab=99.78 E-value=2.9e-17 Score=159.77 Aligned_cols=233 Identities=15% Similarity=-0.024 Sum_probs=157.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---H
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---W 167 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---~ 167 (369)
|...+||++ ++++.|.+. .+.+++|+.|+..++.++.++ +++|++++..|.+ +
T Consensus 47 p~~~~lE~~----la~leg~~~-------~v~~ssG~~Ai~~~l~all~~-------------Gd~Vv~~~~~y~~t~~~ 102 (397)
T PRK05939 47 PTTAALEAK----ITKMEGGVG-------TVCFATGMAAIAAVFLTLLRA-------------GDHLVSSQFLFGNTNSL 102 (397)
T ss_pred HHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHHcCC-------------CCEEEECCCccccHHHH
Confidence 556677766 888999875 577777899998888776442 4689999887654 3
Q ss_pred HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
...+...|++++.+++. |+++|+++++++|++|++++++||+|.+.|+++|+++|+++ ++++++|+++
T Consensus 103 ~~~l~~~G~~v~~v~~~------d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~t~ 170 (397)
T PRK05939 103 FGTLRGLGVEVTMVDAT------DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER------GLLYVVDNTM 170 (397)
T ss_pred HHHHHhcCCEEEEECCC------CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc------CCEEEEECCc
Confidence 34566779999888753 78999999999999999999999999999999999999999 9999999998
Q ss_pred ccccccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCccccc-ccccCccCCCCCCc--------ccc
Q 017569 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDEL-VFHINYLGSDQPTF--------TLN 317 (369)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~-~~~~~y~~~~~~~~--------~l~ 317 (369)
+.+.. +.+ ...++|.+..+++||++++.. .|.+++.+........ .....|.......+ .+.
T Consensus 171 a~~~~--~~~------~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
T PRK05939 171 TSPWL--FRP------KDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR 242 (397)
T ss_pred ccccc--cCc------cccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 75432 111 123799999999999987533 3444443221100000 00000100000000 000
Q ss_pred CCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 318 FSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 318 ~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
..-....+...|..++.+..-..+-.++.++|..++++|++++.+++-+|
T Consensus 243 ~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~y 292 (397)
T PRK05939 243 DMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYY 292 (397)
T ss_pred hcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 01112235666766665544444433888899999999999998877654
No 153
>PRK09265 aminotransferase AlaT; Validated
Probab=99.78 E-value=6.2e-17 Score=158.44 Aligned_cols=210 Identities=13% Similarity=0.042 Sum_probs=151.0
Q ss_pred CCCCccccccccC----CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHh--CCCCCCCCCCCeEEeCCch
Q 017569 54 GNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF--NTPVADDKTAVGVGTVGSS 127 (369)
Q Consensus 54 ~~p~~~l~~~~~~----~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~t~Ggt 127 (369)
++..++|..+.|. ++++.+.+.+.+.+.. ...|....+..++++++.+++.+.. ++++ ..+++|+|++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~ 105 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-----DDIYIGNGVS 105 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-----ccEEEeCChH
Confidence 3344555555442 2345566666655543 3445555577888888777776432 3443 3488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEE
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v 206 (369)
+++.+++.++..+ ++.|++++++|..+..+++..|+.++.++++. +++.+|+++|++++++++++|
T Consensus 106 ~~l~~~~~~~~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (404)
T PRK09265 106 ELIVMAMQALLNN-------------GDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAI 172 (404)
T ss_pred HHHHHHHHHhCCC-------------CCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEE
Confidence 9998888776432 46899999999999999999999988888864 357899999999998889999
Q ss_pred EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEEEEc-CccCC-
Q 017569 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVS-GHKYG- 279 (369)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi~~~-~hK~l- 279 (369)
++++|+||||.+.+ +++|+++|+++ ++++++|.+|+.+... ... ...+. ......+++. .-|.+
T Consensus 173 ~l~~P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~-~~~~~~~~~~~~vi~~~S~SK~~~ 243 (404)
T PRK09265 173 VIINPNNPTGAVYSKELLEEIVEIARQH------NLIIFADEIYDKILYD--GAV-HISIASLAPDLLCVTFNGLSKAYR 243 (404)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEehhhhhccCC--CCC-cCCHHHcCCCceEEEEecchhhcc
Confidence 99999999999977 88999999999 9999999999865431 111 01111 1223345544 57877
Q ss_pred CCCCCeEEEEEe
Q 017569 280 LVYAGVGWVVWR 291 (369)
Q Consensus 280 ~~p~g~g~l~~~ 291 (369)
......|++++.
T Consensus 244 ~pGlRiG~~v~~ 255 (404)
T PRK09265 244 VAGFRVGWMVLS 255 (404)
T ss_pred CcccceEEEEEe
Confidence 566788999874
No 154
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.78 E-value=7.9e-18 Score=161.91 Aligned_cols=259 Identities=14% Similarity=0.016 Sum_probs=175.3
Q ss_pred ccCCChHHHHHHHHHHhc----cCCCCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe-CCchHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASIN----KNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGL 135 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~----~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~Ggt~a~~~al~ 135 (369)
.|...++.+.+++...+. ...+.+. .++...++-+++++.+++++|.+.+ ...+++ .+|+.++-.+++
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgt~~~Ea~~~ 85 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN----YKVLFLQGGASLQFAMVPM 85 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEEcCCchHHHHHHHH
Confidence 344556788888877652 1122222 2345568888999999999998431 234555 566666666666
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHH-HHhhcCcEEEEeeCCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGSTL 214 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~-~i~~~~~~v~~~~~~~~ 214 (369)
.+..+ | .+...|+....+| .+.+.++.+|.. ..++.+...+..+..++++ ++++++++|.+++..|.
T Consensus 86 nl~~~--------g--~~~l~i~~G~fg~-r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTs 153 (360)
T PRK05355 86 NLLGG--------G--KKADYVDTGSWSK-KAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETI 153 (360)
T ss_pred hcCCC--------C--CeEEEEECCHHHH-HHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCc
Confidence 65432 1 0111233333344 346777888865 6666654224555555555 78888999999999999
Q ss_pred cccCC-CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 215 TGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 215 tG~~~-~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
||... |+++| + +++++||++++.+..| ++++ ..|.+++++||++ +|+|.|+++++++
T Consensus 154 tGv~~~~i~~i------~------g~l~vVDavss~g~~~-------idv~--~~d~~~~ssqK~l-gP~Glg~l~~s~~ 211 (360)
T PRK05355 154 DGTEFHELPDT------G------DVPLVADMSSDILSRP-------IDVS--KFGLIYAGAQKNI-GPAGLTIVIVRED 211 (360)
T ss_pred ceEecCccccc------C------CCcEEEEcCccccCcc-------CCHH--HccEEEEeccccc-cCCceEEEEECHH
Confidence 99997 77776 7 9999999999876652 3433 4579999999998 5999999999875
Q ss_pred CCccccccc-ccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 294 DDLPDELVF-HINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 294 ~~~~~~~~~-~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
.+- .+.. ...|.... .......+|.+...+.++..+|+.+..+ |++.+ |+.+++++++++|+++|++
T Consensus 212 ~l~--~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~ 284 (360)
T PRK05355 212 LLG--RALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFY 284 (360)
T ss_pred HHh--hcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 321 1111 01111100 0111234899999999999999999888 89999 9999999999999999965
No 155
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.78 E-value=1.3e-16 Score=155.93 Aligned_cols=210 Identities=17% Similarity=0.119 Sum_probs=155.7
Q ss_pred ccccccccC-----CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 58 LNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 58 ~~l~~~~~~-----~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
++|+.+.|. ++++.+.+++.++++.. ...|...++..++++++.+++.+. |.+.+ ...+++|+|+++++.
T Consensus 34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~---~~~i~~t~G~~~al~ 109 (401)
T TIGR01264 34 IKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE---ADDVVLCSGCSHAIE 109 (401)
T ss_pred eecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC---HHHEEECcChHHHHH
Confidence 567666653 34567888888777654 234555678888998888877763 43321 134889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEee
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
+++.++.++ ++.|+++.++|..+...++..|++++.++++. +++.+|+++|++++++++++|++++
T Consensus 110 ~~~~~l~~~-------------gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 176 (401)
T TIGR01264 110 MCIAALANA-------------GQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNN 176 (401)
T ss_pred HHHHHhCCC-------------CCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcC
Confidence 988877542 46899999999999999999999999998864 3589999999999988899999999
Q ss_pred CCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcE-EEEcCccC-CCCCCC
Q 017569 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKS-INVSGHKY-GLVYAG 284 (369)
Q Consensus 211 ~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds-i~~~~hK~-l~~p~g 284 (369)
|+||||.+. ++++|+++|+++ ++++++|++|..+... ......... ...... ++-+.-|. +....+
T Consensus 177 p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 177 PSNPCGSVFSRQHLEEILAVAERQ------CLPIIADEIYGDMVFS--GATFEPLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEhhhhhhccC--CcccccHHHcCCCCcEEEEccCcccCCCccce
Confidence 999999985 588899999999 9999999999875431 100010011 111123 34457884 777889
Q ss_pred eEEEEEeC
Q 017569 285 VGWVVWRT 292 (369)
Q Consensus 285 ~g~l~~~~ 292 (369)
+|++++.+
T Consensus 249 iG~iv~~~ 256 (401)
T TIGR01264 249 LGWIIIHD 256 (401)
T ss_pred EEEEEecC
Confidence 99999864
No 156
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.77 E-value=1.5e-17 Score=161.25 Aligned_cols=217 Identities=16% Similarity=0.074 Sum_probs=154.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...++|+. +++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|..
T Consensus 54 p~~~~le~~----la~l~g~~~-------~~~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~~~~t~~~ 109 (380)
T TIGR01325 54 PTVAAFEER----IAALEGAER-------AVATATGMSAIQAALMTLLQA-------------GDHVVASRSLFGSTVGF 109 (380)
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCCcchHHHH
Confidence 345555555 889999864 688999999999988776442 4678888877754
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+..+|++++.++.+ |++++++++++++++|++..|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 110 ~~~~~~~~g~~v~~v~~~------d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~------gi~livD~a 177 (380)
T TIGR01325 110 ISEILPRFGIEVSFVDPT------DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAI------GALLVVDNV 177 (380)
T ss_pred HHHHHHHhCCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECC
Confidence 444567789998888754 68999999998999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCC-Ce-EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GV-GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~-g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. ..| . ..++|.++.|++|+++++. .. |+++.+ ++.. +.+.. +.. .. |.. ..
T Consensus 178 ~~~~~~--~~p---l---~~g~Divv~S~sK~l~g~g~~~gG~vv~~-~~~~-~~l~~---~~~----~~---g~~--~~ 235 (380)
T TIGR01325 178 FATPVL--QQP---L---KLGADVVVYSATKHIDGQGRVMGGVIAGS-EELM-AEVAV---YLR----HT---GPA--MS 235 (380)
T ss_pred Cccccc--CCc---h---hhCCCEEEeeccceecCCCCeEEEEEEeC-HHHH-HHHHH---HHH----hh---CCC--CC
Confidence 975432 111 1 2278999999999998764 33 555543 3322 12111 100 00 111 12
Q ss_pred HHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCcccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
...+|..++.+..-..+ + +..++|+++++.|++++.+++-+
T Consensus 236 p~~a~~~l~~l~tl~~r-~~~~~~~a~~la~~L~~~p~v~~V~ 277 (380)
T TIGR01325 236 PFNAWVLLKGLETLSLR-MQKQFDSALAIAEWLQAQPQVQAVY 277 (380)
T ss_pred HHHHHHHHhccCcHHHH-HHHHHHHHHHHHHHHHcCCCccEEE
Confidence 34556666655443332 3 88999999999999999776544
No 157
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=4.6e-17 Score=159.74 Aligned_cols=232 Identities=14% Similarity=0.007 Sum_probs=158.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK- 169 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~- 169 (369)
|....||+. ++++.|.+. .+++++|+.|+..++.++..+ ++.|+++...|.....
T Consensus 69 p~~~~Le~~----lA~l~g~~~-------av~~sSG~aAi~~al~all~~-------------Gd~Vv~~~~~y~~t~~~ 124 (436)
T PRK07812 69 PTQDVVEQR----IAALEGGVA-------ALLLASGQAAETFAILNLAGA-------------GDHIVSSPRLYGGTYNL 124 (436)
T ss_pred chHHHHHHH----HHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEeCCcchHHHHH
Confidence 455566655 899999875 788999999998888776442 4688888877766443
Q ss_pred ---HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 170 ---FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 170 ---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
.+...|++++.++ +. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ +++++||++
T Consensus 125 ~~~~l~~~Gi~v~~vd-d~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~------gi~liVD~t 193 (436)
T PRK07812 125 FHYTLPKLGIEVSFVE-DP----DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEA------GVPLIVDNT 193 (436)
T ss_pred HHHHhhcCeEEEEEEC-CC----CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 3444688777775 32 289999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCc-ccc----c-ccccCccCC---C--CCC-
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDL-PDE----L-VFHINYLGS---D--QPT- 313 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~-~~~----~-~~~~~y~~~---~--~~~- 313 (369)
++.+.. ..+ + ..++|.++.|+|||++++.+ .|.+++.+.... ... + ..+++|... . ...
T Consensus 194 ~a~~~~--~~p-----l-~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (436)
T PRK07812 194 IATPYL--IRP-----L-EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAY 265 (436)
T ss_pred Cccccc--CCc-----h-hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHH
Confidence 875433 111 1 24899999999999976533 455555433210 000 0 001111110 0 000
Q ss_pred --------ccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 314 --------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 314 --------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...-|.+ ..+...|..++.+..-+.+-.+..++|..++++|++++.+++-+|
T Consensus 266 ~~~~~~~~~~~~G~~--l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~y 325 (436)
T PRK07812 266 ALKARVQLLRDLGSA--ISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNY 325 (436)
T ss_pred HHHHHHHHHHhcCCC--CCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 0001211 234666766666654444422999999999999999998887654
No 158
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.77 E-value=1.1e-16 Score=168.97 Aligned_cols=308 Identities=11% Similarity=0.036 Sum_probs=193.9
Q ss_pred ccccccccc-hhHhhhCC-CCCCCCCCCCHHHHHHHHHHhhhhcCCCCcccc-ccccCCChHHHHHHHHH---Hhcc-CC
Q 017569 12 EILSSTFAS-RYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLA-SFVTTWMEPECDKLVMA---SINK-NY 84 (369)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~-~~~~~~~~~~v~~~~~~---~~~~-n~ 84 (369)
++|+++|.. .|-.-++. ...+|+ +.++.++++.++++-..+...+.-++ +|-++..|+.+.+-+.+ .+.. .+
T Consensus 32 ~s~~~l~~~~iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytP 110 (954)
T PRK05367 32 DSLDALIDQAVPASIRLAEPLDLPA-ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTP 110 (954)
T ss_pred CCHHHHhhhhCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCC
Confidence 456677766 44322222 234553 57999999999988765543221112 23334445555343332 1221 34
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 017569 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (369)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h 164 (369)
.+++.++|.-+...+.+.++++++|++. .+..+..++|.+...++++.+.. +.++++|++++..|
T Consensus 111 yQ~EisQG~Leal~~~Qt~la~LtG~~~-----anaSl~d~aTAa~ea~~~a~~~~----------~~~~~~vlv~~~~h 175 (954)
T PRK05367 111 YQPEISQGRLEALLNFQTMVADLTGLEI-----ANASLLDEATAAAEAMALAKRVS----------KSKSNRFFVDDDVH 175 (954)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHCCCh-----hhccccccHHHHHHHHHHhhhhc----------cCCCCEEEEcCccC
Confidence 5555567777777889999999999997 34677888888776555554321 11136899999999
Q ss_pred chHHHH----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 165 VCWEKF----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 165 ~s~~~~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
++.... ++..|++++.+|.+.+ ++ ++++..+++.+| +.+|.+.|+++|+++||++ |++
T Consensus 176 P~~~~v~~t~a~~~G~ev~~~~~~~d---~~--------~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~------Gal 237 (954)
T PRK05367 176 PQTLDVLRTRAEPLGIEVVVGDAAKA---LD--------HDDVFGVLLQYP-GTSGEVRDYTALIAAAHAR------GAL 237 (954)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccC---CC--------cccEEEEEEecC-CCCeeeccHHHHHHHHHHc------CCE
Confidence 986654 4567999999987542 11 235556666665 6679999999999999999 999
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCC----CCCCCeEEEEEeCC--CCccccccc-ccCccCCC---
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTK--DDLPDELVF-HINYLGSD--- 310 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l----~~p~g~g~l~~~~~--~~~~~~~~~-~~~y~~~~--- 310 (369)
++||+.+..... +. +....++|.++.++|||+ ++++++|++++|++ +.++..+.. ..+..+..
T Consensus 238 ~~vda~~~Al~~--l~-----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~ 310 (954)
T PRK05367 238 VAVAADLLALTL--LT-----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALR 310 (954)
T ss_pred EEEEehhhhccC--CC-----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccc
Confidence 999996633322 11 112458999999999994 22335999999864 112111110 00000100
Q ss_pred ------CCCcc-ccC-----CcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 311 ------QPTFT-LNF-----SKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 311 ------~~~~~-l~~-----tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++... ..+ |-.+..++..++++.++|.+|++++ ++..+|+|++++|++.|
T Consensus 311 lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 311 LALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00000 012 3333334445555678999999998 89999999999998765
No 159
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.3e-17 Score=159.01 Aligned_cols=228 Identities=9% Similarity=-0.013 Sum_probs=158.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW--- 167 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~--- 167 (369)
|...+||+. ++++.|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|...
T Consensus 63 p~~~~le~~----lA~l~g~~~-------al~~~SG~~Ai~~al~all~p-------------Gd~VIv~~~~y~~t~~~ 118 (427)
T PRK05994 63 PTNAVLEER----VAALEGGTA-------ALAVASGHAAQFLVFHTLLQP-------------GDEFIAARKLYGGSINQ 118 (427)
T ss_pred ccHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCcchhHHHH
Confidence 445555555 899999875 788999999999888887542 47899999888753
Q ss_pred -HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 168 -EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 168 -~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
...+...|+.++.++.+ |+++++++++++|++|++++++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~~------d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~a 186 (427)
T PRK05994 119 FGHAFKSFGWQVRWADAD------DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRA------GLPLIVDNT 186 (427)
T ss_pred HHHHHHhcCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 34456779888888753 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCccccccccc--CccCCCC---------CC-
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHI--NYLGSDQ---------PT- 313 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~~~~~--~y~~~~~---------~~- 313 (369)
++.+.. .. +. ..++|.++.|+|||++++.+ .|.+++...... +.... .++.... .+
T Consensus 187 ~a~~~~---~~--pl---~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~ 255 (427)
T PRK05994 187 LASPYL---IR--PI---EHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFD---WSKSGKYPMLSEPRPEYHGLVLHETF 255 (427)
T ss_pred cccccc---CC--cc---ccCCcEEEEcCccccCCCCCcEEEEEEeCCccc---cccccccccccCCcchhhhhhHHHHh
Confidence 975432 11 11 24899999999999987664 355555322110 00000 0010000 00
Q ss_pred -------------ccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 314 -------------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 314 -------------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....|. ......+|..++.+..-..+-.+..++|.++++.|++++.+++-+|
T Consensus 256 ~~~~~~~~~~~~~~~~~G~--~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~y 320 (427)
T PRK05994 256 GNFAFAIAARVLGLRDLGP--AISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNY 320 (427)
T ss_pred hhhhhHHHHHHHHHHhcCC--CCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 000011 1235566666665544333322899999999999999998876544
No 160
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.77 E-value=7.8e-17 Score=157.64 Aligned_cols=268 Identities=12% Similarity=0.018 Sum_probs=178.3
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 55 ~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
+..+++..+.|..+ ++.+.+.+.++++.....|....+..++++++.+++++.+|.+.+. ..+++|+|+++|+..+
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~---~~i~~t~G~~~al~~~ 109 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD---NEITVGGGAKQAIFLA 109 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHHHH
Confidence 33356666556543 4667888888776555556666688999999999999998986422 3589999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+.++..+ ++.|++++++|..+...+...|..++.+++++ +++.+|+++|++++.+++++|++++|+
T Consensus 110 ~~~~~~~-------------gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 176 (402)
T PRK06107 110 LMATLEA-------------GDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPS 176 (402)
T ss_pred HHHhcCC-------------CCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCC
Confidence 8765332 47899999999888888888888888888863 457899999999998889999999999
Q ss_pred CCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC-C--CCcEEEE-cCccCCC-CCCC
Q 017569 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-P--LVKSINV-SGHKYGL-VYAG 284 (369)
Q Consensus 213 ~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~--~~Dsi~~-~~hK~l~-~p~g 284 (369)
||||.+.+ +++|+++|++++ ++++++|.+|+.... -.+........ . .-..+++ +.+|.++ ...+
T Consensus 177 NPtG~~~s~~~~~~l~~~a~~~~-----~~~iI~De~y~~l~~--~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (402)
T PRK06107 177 NPTGAVYSRAELRALADVLLRHP-----HVLVLTDDIYDHIRF--DDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWR 249 (402)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcC-----CeEEEEehhcccccc--CCCCCCCHHHhCcCccCCEEEEeccchhhcCcccc
Confidence 99998864 677778888841 799999999986432 11111111111 1 1234444 4689985 5567
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+|+++..+ +.. ..+.....+.. . +...+.++++...+ +..-+++. +..++.+.+.+.|++.
T Consensus 250 iG~~~~~~-~~~-~~~~~~~~~~~---------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (402)
T PRK06107 250 IGYAAGPA-DLI-AAINKLQSQSS---------S---CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI 314 (402)
T ss_pred eeeeecCH-HHH-HHHHHHHHhcc---------c---CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89987632 222 22111011000 0 11234444555555 22223333 5667777788888765
No 161
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.76 E-value=5.2e-17 Score=156.35 Aligned_cols=255 Identities=10% Similarity=0.032 Sum_probs=165.9
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
+.++|....+. ++++.+.+++.+.+.... .|. .++.. ++++.+++++|++++ .+++|+|+++++..++
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~-~y~-~~~~~----~lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDCAE-RYP-DVEYR----HLHQALARHHQVPAS-----WILAGNGETESIFAVV 89 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHhcc-cCc-CccHH----HHHHHHHHHhCcChh-----hEEECCCHHHHHHHHH
Confidence 33445444343 445677888776654322 222 22344 455557778888762 4899999999998877
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.++ .. + .+++..|++..+...++..|++++.+|+++ +++.+| +++++.+.+++++|++++|+|
T Consensus 90 ~~l-~~-------------g-~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~N 153 (356)
T PRK08056 90 SGL-KP-------------R-RAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNN 153 (356)
T ss_pred HHh-CC-------------C-CEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcC
Confidence 764 21 2 467778889889999999999999999864 346777 456666778899999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|||.+.+ +++|+++|+++ ++++++|++|..+... .......+....-..++.|.+|+++ ....+|+++
T Consensus 154 PTG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v 225 (356)
T PRK08056 154 PTGLLPERQLLQAIAERCKSL------NIALILDEAFIDFIPD--ETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLV 225 (356)
T ss_pred CCCCCCCHHHHHHHHHHHHhc------CCEEEEecchhccCCc--chHHHHHhccCCCEEEEEechhhccCcchhheeee
Confidence 9999977 88899999999 9999999999765421 0000011111224566788999988 678899998
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+.+.+ ..+.. +.. . .+ ...+.+.++...+.... .+++ +..+..+++.+.|++++
T Consensus 226 ~~~~~~~-~~l~~---~~~----~----~~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 284 (356)
T PRK08056 226 NSDDAAV-ARMRR---QQM----P----WS---INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALP 284 (356)
T ss_pred cCCHHHH-HHHHH---hCC----C----Cc---hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7543322 22211 000 0 01 12344445444553223 3333 56788888999998764
No 162
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.2e-16 Score=153.64 Aligned_cols=250 Identities=15% Similarity=0.051 Sum_probs=165.8
Q ss_pred ccccccC-CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 60 LASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 60 l~~~~~~-~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
|..+.+. ++++.+.+++.+++... ...|. .+...+++++ +++++++++ ..+++|+|+++++..++.++
T Consensus 27 l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~----ia~~~~~~~-----~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 27 MDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREE----LARYCSVVP-----TNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHH----HHHHhCCCc-----ccEEEecCHHHHHHHHHHHh
Confidence 3333443 34567788887776532 22222 2344555555 677778775 24899999999998888776
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTG 216 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG 216 (369)
.++ +++|+++.++|..+...++..|++++.++++++ +.+|++++++++++ ++++|++++|+||||
T Consensus 97 ~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG 162 (351)
T PRK14807 97 INK-------------GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED-YTYDVGSFIKVIEKYQPKLVFLCNPNNPTG 162 (351)
T ss_pred cCC-------------CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCC
Confidence 442 478999999999998889999999999998764 88999999999975 899999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDD 295 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~ 295 (369)
.+.+.+++.++|+++ +.++++|++|+.+. ............--.+.-+..|.++ .+.++|+++.. ++.
T Consensus 163 ~~~~~~~l~~l~~~~------~~~~ivDe~y~~~~----~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~-~~~ 231 (351)
T PRK14807 163 SVIEREDIIKIIEKS------RGIVVVDEAYFEFY----GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN-ENI 231 (351)
T ss_pred CCCCHHHHHHHHHhC------CCEEEEeCcchhhc----ccchHHHhhhCCCEEEEecchHhcccchhceeeeecC-HHH
Confidence 999999999999988 88899999997532 1111111111111234455779885 67889999853 222
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
. ..+... .. .+ . ...+.+.++...+....+++. +..+..+++.+.|++.
T Consensus 232 ~-~~~~~~----~~---~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~ 282 (351)
T PRK14807 232 L-KYLNLV----KS---PY----N---INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI 282 (351)
T ss_pred H-HHHHHc----cC---CC----C---cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 222110 00 00 0 113444455555543334444 4556666777777664
No 163
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.76 E-value=8.5e-17 Score=156.97 Aligned_cols=217 Identities=14% Similarity=0.063 Sum_probs=157.0
Q ss_pred ccccccccCC-ChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 58 LNLASFVTTW-MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
++|+.+.|.. +++.+.+++..+++.. ...|....+..++++.+.+++.+.++...+ ....++|+|+++++..+
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT---ADHIVMTCGAAGALNVA 112 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC---cCcEEEeCChHHHHHHH
Confidence 4555555543 3567888887776532 344445568888999988888887665432 13489999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+.++..+ ++.|++++++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++++|
T Consensus 113 ~~~l~~~-------------gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~N 179 (394)
T PRK06836 113 LKAILNP-------------GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNN 179 (394)
T ss_pred HHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCC
Confidence 8876432 468999999999999999999999999999876689999999999999999999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|||.+.| +++|+++|++..++++.++++++|.+|..+... ............-..+..+..|.++ .+.++|+++
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD--GAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC--CCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 9999866 667777788821112229999999999875431 1011111111112355566889876 556889998
Q ss_pred EeC
Q 017569 290 WRT 292 (369)
Q Consensus 290 ~~~ 292 (369)
..+
T Consensus 258 ~~~ 260 (394)
T PRK06836 258 VNP 260 (394)
T ss_pred cCH
Confidence 753
No 164
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.76 E-value=6.9e-17 Score=156.30 Aligned_cols=189 Identities=12% Similarity=0.085 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (369)
+...+++.+++..++.. ...+ +.+++.+++++++|.+. .++|+||++|+.+++.++ ..
T Consensus 11 ~~e~~a~~~~~~~~~~~-~~g~----~~~~~e~~la~~~g~~~-------~v~~~sgt~aL~~~l~al~~~--------- 69 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-GDGP----FSRRCETWLENRTGTKK-------ALLTPSCTAALEMAALLLDIQ--------- 69 (376)
T ss_pred HHHHHHHHHHHHcCCcc-CCcH----HHHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 44567777777665432 1223 33445556888888864 899999999998887765 22
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
.+++|+++.++|.++..++...|++++.++++++++.+|+++++++++++|++|+ +++++|...|+++|.++|
T Consensus 70 ----pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la 142 (376)
T TIGR02379 70 ----PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALA 142 (376)
T ss_pred ----CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHH
Confidence 2479999999999999999999999999999977689999999999999998886 667889999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
+++ ++++++|+|++.+.. .... +.. ....+.++++...|.+.+....|++++.+++..
T Consensus 143 ~~~------~i~vIeDaa~~~g~~--~~~~-~~g-~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~ 200 (376)
T TIGR02379 143 NKH------QLFVIEDAAQGVMST--YKGR-ALG-SIGHLGTFSFHETKNYTSGGEGGALLINDQAFI 200 (376)
T ss_pred HHC------CCEEEEECccccCCc--cCCc-ccC-CCCCEEEEeCCCCCcCcccCCceEEEECCHHHH
Confidence 999 999999999986542 1111 100 011233444444454544323577777765443
No 165
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.1e-16 Score=157.10 Aligned_cols=233 Identities=16% Similarity=0.069 Sum_probs=154.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|...+||++ ++++.|.+. .+++++|++|+..++.++..+ +++|+++.+.|......
T Consensus 58 pt~~~Le~~----lA~l~g~~~-------~l~~ssG~~Ai~~al~al~~~-------------Gd~Vl~~~~~Y~~t~~~ 113 (425)
T PRK06084 58 PTNDVLEQR----VAALEGGVG-------ALAVASGMAAITYAIQTIAEA-------------GDNIVSVAKLYGGTYNL 113 (425)
T ss_pred chHHHHHHH----HHHHhCCCc-------eeEehhHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHHH
Confidence 455566655 888888764 678899999999998887542 46888888877643333
Q ss_pred H----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ ...|+++.+++. .|+++|++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 114 ~~~~l~~~gi~v~~~d~------~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------~i~vVvD~a 181 (425)
T PRK06084 114 LAHTLPRIGIETRFAAH------DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRH------GVPLIVDNT 181 (425)
T ss_pred HHHhcccceeEEEEECC------CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 3 234666665543 378999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCcccc-------cc-cccCccCCC-CCCc--
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDE-------LV-FHINYLGSD-QPTF-- 314 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~~~~-------~~-~~~~y~~~~-~~~~-- 314 (369)
++.+.. ..| . ..++|.++.|++||++++.. .|.+++.+....... +. .++.|.+-. ..+.
T Consensus 182 ~a~~~~--~~p---~---~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 253 (425)
T PRK06084 182 VATPVL--CRP---F---EHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGP 253 (425)
T ss_pred Cccccc--CCh---h---hcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcch
Confidence 985432 111 1 23799999999999987643 344444322110000 00 011121100 0000
Q ss_pred ----------cccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 315 ----------TLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 315 ----------~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...+.-.......+|..++.+..-..+-.++.++|..+++.|++.+.+++-+|
T Consensus 254 ~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~y 316 (425)
T PRK06084 254 AAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKY 316 (425)
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 00011112235667766666654333322999999999999999998876544
No 166
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.76 E-value=2.3e-17 Score=158.83 Aligned_cols=220 Identities=16% Similarity=0.064 Sum_probs=153.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||++ ++++.|.+. +++++||++|+.+++. +..+ +++|+++.+.|.....
T Consensus 53 ~p~~~~le~~----lA~leg~~~-------~v~~~sG~aAi~~~l~-~l~~-------------GD~VI~~~~~yg~~~~ 107 (364)
T PRK07269 53 NPTRAKLEET----LAAIESADY-------ALATSSGMSAIVLAFS-VFPV-------------GSKVVAVRDLYGGSFR 107 (364)
T ss_pred CccHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHH-HhCC-------------CCEEEEecCCcCchHH
Confidence 4567777777 788888764 8999999999988874 3221 4688888776643322
Q ss_pred HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
......-.- .+.+ .+.+|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|++|+.
T Consensus 108 ~~~~~~~~~-~~~~---~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~------gi~vvvD~t~~~ 177 (364)
T PRK07269 108 WFNQQEKEG-RFHF---TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAK------GAKVIVDNTFYS 177 (364)
T ss_pred HHHHHHhcC-cEEE---EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCcc
Confidence 221110000 1111 145689999999999999999999999999999999999999999 999999999764
Q ss_pred ccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHH
Q 017569 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~ 327 (369)
... ..| + ..++|.++.|++||++++.+ .|+++.++++.. +.+.....+. |. ......
T Consensus 178 ~~~--~~p-----l-~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~-~~~~~~~~~~----------G~--~~s~~~ 236 (364)
T PRK07269 178 PIY--QRP-----I-ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELY-EKLFYNLNTT----------GA--VLSPFD 236 (364)
T ss_pred ccc--CCc-----h-hhCCcEEEecCceeccCCCcccceEEEeCcHHHH-HHHHHHHHHh----------CC--CCCHHH
Confidence 322 111 1 23899999999999987775 577777665432 2221101111 11 124677
Q ss_pred HHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 328 QYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 328 ~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
.|..++.|.. +..+ ++.++|++++++|++.+.+.+-+|
T Consensus 237 a~l~~~~L~t--L~~r~~~~~~na~~~a~~L~~~p~v~~v~y 276 (364)
T PRK07269 237 SYLLMRGLKT--LSLRMERSTANAQEVVAFLKKSPAVKEVLY 276 (364)
T ss_pred HHHHHcCCCc--HHHHHHHHHHHHHHHHHHHHhCCCccEEeC
Confidence 7887777765 4433 899999999999999887776553
No 167
>PRK09148 aminotransferase; Validated
Probab=99.76 E-value=3.8e-16 Score=152.94 Aligned_cols=273 Identities=14% Similarity=-0.013 Sum_probs=175.6
Q ss_pred cCCCCccccccccCC-ChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHH
Q 017569 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 53 ~~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (369)
.+.+.++|+...|.. +++.+.+.+.++++.. ...|....+..++++++.+++.+.+|.+.+. ...+++|+|+++++
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al 105 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP--DTQVVATLGSKEGF 105 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHHH
Confidence 344445665555543 3456666677666432 3445555678999999999999888875321 12489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEe
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
.+++.++.++ ++.|++++|+|..+...+...|+.++.+|++.+ .+..+++++.+...+++++|+++
T Consensus 106 ~~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 106 ANMAQAITAP-------------GDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred HHHHHHhcCC-------------CCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 9988887542 478999999999999888999999999998753 24444444444444678999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-ccc-CCCCcEEEEcCccCCC-CCC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKYGL-VYA 283 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Dsi~~~~hK~l~-~p~ 283 (369)
.|+||||.+.+ +++|.++|+++ ++++++|++|+.+...- .+.... .+. ......+.-+..|.++ ...
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~~~~~~-~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKH------DIIILSDLAYSEIYFDG-NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhhcCC-CCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 99999999966 46788999999 99999999998754310 010000 111 1122234567889876 567
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--HhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.+|+++. +++.. ..+.....+... +- ..+.+.++...+. .+-++++ ...+...++.+.|++.
T Consensus 246 R~G~~v~-~~~~i-~~l~~~~~~~~~---------~~---~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 246 RMGFAVG-NERLI-AALTRVKSYLDY---------GA---FTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred heeeeeC-CHHHH-HHHHHHHHHhcc---------CC---ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8999985 33222 222111111110 00 1233444444442 2223333 6677788888888887
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|+
T Consensus 312 ~~ 313 (405)
T PRK09148 312 GW 313 (405)
T ss_pred CC
Confidence 64
No 168
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=5.7e-17 Score=158.36 Aligned_cols=233 Identities=17% Similarity=0.058 Sum_probs=162.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||+. ++++.|... .+.+++|+.|+.+++.++..+ +++||++.+.|.+...
T Consensus 60 nPtv~~lE~~----la~leg~~~-------av~~~SG~aAi~~al~all~~-------------GD~VI~~~~~Y~~T~~ 115 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGVG-------AVATASGQAAIMLAVLNICSS-------------GDHLLCSSTVYGGTFN 115 (432)
T ss_pred CcHHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHhcCC-------------CCEEEECCCchHHHHH
Confidence 4666777776 888988875 788999999999999877432 4799999998875544
Q ss_pred H----HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
. +..+|+++++++. .+|+++++++|+++|++|++.+++||++.+.|+++|+++|+++ ++++++|+
T Consensus 116 ~~~~~l~~~Gi~v~~vd~-----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~------gi~livD~ 184 (432)
T PRK06702 116 LFGVSLRKLGIDVTFFNP-----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKEL------EVPFIVDN 184 (432)
T ss_pred HHHHHHHHCCCEEEEECC-----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHc------CCEEEEEC
Confidence 4 6778999888853 4689999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCC-CCcc---ccccc-ccC-----ccCC----
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTK-DDLP---DELVF-HIN-----YLGS---- 309 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~-~~~~---~~~~~-~~~-----y~~~---- 309 (369)
+++... +.. +. ..++|.++-|..||+++..+. |+++.... .+.. ..+.. +.. |...
T Consensus 185 T~~tP~---~~~--pl---~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 185 TLATPY---LCQ--AF---EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred CCCchh---hCC--hh---hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 986422 221 11 348999999999998876544 43432211 1100 00000 000 0000
Q ss_pred -----CCCCcc-ccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 310 -----DQPTFT-LNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 310 -----~~~~~~-l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...... .-|+ ...+...|..++.+..-..+-.+..+||..++++|++.+.++.-+|
T Consensus 257 ~~~~~~~~~~~~~~g~--~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~y 318 (432)
T PRK06702 257 AYIVKARVQLLRDYGN--CMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNY 318 (432)
T ss_pred hHHHHHHHHHHHHccC--CCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 000000 0022 3346788887777754333322888999999999999998876543
No 169
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.6e-17 Score=159.09 Aligned_cols=218 Identities=14% Similarity=0.012 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HH
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FA 171 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~ 171 (369)
..+.+++.++.+.|.+. .+++++|++|+..++.++.++ +++|+++.+.|..+.. .+
T Consensus 65 t~~~Le~~la~le~~~~-------~v~~sSG~aAi~~~l~all~~-------------GD~Vlv~~~~Y~~~~~l~~~~l 124 (395)
T PRK05967 65 TTDALCKAIDALEGSAG-------TILVPSGLAAVTVPFLGFLSP-------------GDHALIVDSVYYPTRHFCDTML 124 (395)
T ss_pred HHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEccCCcHHHHHHHHHHH
Confidence 33445555888876553 677778999999888877542 5799999999988664 45
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
+.+|+++++++.+ +.++++++++++|++|++++|+||++.+.|+++|+++|+++ +++++||++|+.+.
T Consensus 125 ~~~Gi~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~------g~~vvVD~t~a~p~ 192 (395)
T PRK05967 125 KRLGVEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRH------GAIVMMDNTWATPL 192 (395)
T ss_pred HhcCeEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHh------CCEEEEECCccCce
Confidence 6779998888643 34789999999999999999999999999999999999999 99999999998643
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
. ..| .+ .|+|.+.-|..||+.+..+ .|+++. +++.. ..+....... |. ...+..+|
T Consensus 193 ~--~~p---l~---~GaDivv~S~tKy~~Gh~d~~~G~v~~-~~~~~-~~l~~~~~~~----------G~--~~~p~da~ 250 (395)
T PRK05967 193 Y--FRP---LD---FGVDISIHAATKYPSGHSDILLGTVSA-NEKCW-PQLLEAHGTL----------GL--CAGPDDTY 250 (395)
T ss_pred e--cCh---hH---cCCCEEEEecccccCCCCCeeEEEEEc-CHHHH-HHHHHHHHHc----------CC--CCCHHHHH
Confidence 2 222 22 3899999999999765433 355543 32211 1111000000 11 22466788
Q ss_pred HHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 330 YQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 330 ~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
..++.+..-.++-.++.++|..++++|++++.+++-+|
T Consensus 251 l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~y 288 (395)
T PRK05967 251 QILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLH 288 (395)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEEC
Confidence 77777665555433999999999999999998876554
No 170
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.76 E-value=1.5e-16 Score=167.55 Aligned_cols=306 Identities=9% Similarity=-0.013 Sum_probs=193.4
Q ss_pred ccccccc-cchhHhhhCCCCCCC--CCCCCHHHHHHHHHHhhhhcCCCCccccc--cccCCChHHHHHHHHHHhc---c-
Q 017569 12 EILSSTF-ASRYVRAAIPRFKMP--DNSMPKEAAYQVINDELMLDGNPRLNLAS--FVTTWMEPECDKLVMASIN---K- 82 (369)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~~~~~p--~~~~~~~~i~~~l~~~~~~~~~p~~~l~~--~~~~~~~~~v~~~~~~~~~---~- 82 (369)
++|+++| ...|-.-......+| ..+.++.++++.++++-..+.. ..|+.+ +-+...|+.+.+.+.+... .
T Consensus 57 ~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~-~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Tay 135 (993)
T PLN02414 57 DSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKV-FKSYIGMGYYNTHVPPVILRNILENPGWYTQY 135 (993)
T ss_pred cCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc-cccccCCCCCCccCCHHHHHHHHhChHHHhhc
Confidence 4566777 444421122234566 2578999999999987655432 122222 2223345666566554332 1
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 017569 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (369)
Q Consensus 83 n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~ 162 (369)
.+++++.+++.-+.-.+.+.++++|+|++. .+..++.++|.+...++++.+.. +.++++|++++.
T Consensus 136 tPYqaEisQG~lqal~~~Qt~ia~LtG~~~-----anaSL~d~aTAaaea~~~a~~~~----------~g~~~~VlVs~~ 200 (993)
T PLN02414 136 TPYQAEIAQGRLESLLNYQTMITDLTGLPM-----SNASLLDEGTAAAEAMAMCNNIL----------KGKKKKFLIASN 200 (993)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhCCCh-----hhEeecCChHHHHHHHHHHHhcc----------cCCCCEEEEcCc
Confidence 344444456777777789999999999997 34888889998887766655321 112468999999
Q ss_pred CcchHHHHH----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC
Q 017569 163 VQVCWEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 163 ~h~s~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~ 238 (369)
.|+++...+ +..|++++.+|++.. + ...+.+..+++.+| +.+|.+.|+++|+++|+++ |
T Consensus 201 ~hP~~~~v~~t~a~~~GieV~~v~~~~~----~------~~~~~v~~vlvq~P-~~~G~v~dv~~I~~~ah~~------G 263 (993)
T PLN02414 201 CHPQTIDVCQTRADGLGLEVVVADEKDF----D------YSSGDVCGVLVQYP-ATDGEVLDYAEFVKNAHAN------G 263 (993)
T ss_pred cCHhHHHHHHHhhhhcCCEEEEecchhh----c------cccCceEEEEEecC-CCCeEEcCHHHHHHHHHHc------C
Confidence 999876555 446999999987531 1 11223445554455 5669999999999999999 9
Q ss_pred ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC-----CCCCCeEEEEEeCCCCcccccc-cccCccCCCC-
Q 017569 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-----LVYAGVGWVVWRTKDDLPDELV-FHINYLGSDQ- 311 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l-----~~p~g~g~l~~~~~~~~~~~~~-~~~~y~~~~~- 311 (369)
++++| +|...+..+.. +....++|.++.++|||+ ++|. .|++++|++ .. +.+. .-..|.....
T Consensus 264 aL~iV-aad~lal~~l~------~pge~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~-~~-r~~PgriVG~s~d~~g 333 (993)
T PLN02414 264 VKVVM-ATDLLALTMLK------PPGEWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQE-YK-RLMPGRIIGVSVDSSG 333 (993)
T ss_pred CEEEE-EECHHHhcCCC------CHhhccCcEEEECCCccccCCCCCCCC-eeEEEECHH-HH-hhCCCcccCcccCCCC
Confidence 99999 66654443211 122448999999999998 4444 899999874 21 1221 0112210000
Q ss_pred -CCc--cc----------cCCcchhHHHHHHHHH-----HHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 312 -PTF--TL----------NFSKGSSQIIAQYYQF-----IRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 312 -~~~--~l----------~~tr~~~~~l~~~~~l-----~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.-+ ++ .+|.+.-...++++++ .++|.+|++++ ++.++++|++++|.+.|
T Consensus 334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G 402 (993)
T PLN02414 334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG 402 (993)
T ss_pred CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC
Confidence 000 00 2455443334444433 46799999998 89999999999999877
No 171
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.76 E-value=3e-17 Score=158.94 Aligned_cols=217 Identities=13% Similarity=0.021 Sum_probs=151.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW--- 167 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~--- 167 (369)
|....||+. ++++.|.+. .+++++|+.|+..++ .+.. .+++|+++++.|...
T Consensus 50 p~~~~Le~~----la~l~g~~~-------al~~~SG~~Al~~~l-~~l~-------------pGd~Vi~~~~~y~~t~~~ 104 (380)
T PRK06176 50 PTRFALEEL----IADLEGGVK-------GFAFASGLAGIHAVF-SLFQ-------------SGDHVLLGDDVYGGTFRL 104 (380)
T ss_pred hhHHHHHHH----HHHHhCCCC-------EEEECCHHHHHHHHH-HHcC-------------CCCEEEEcCCChhHHHHH
Confidence 445566655 899999875 577777788886544 3322 147899999877643
Q ss_pred -HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 168 -EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 168 -~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
...+...|++++.++.. |++++++++++++++|++.+|+||+|.+.|+++|+++|+++ ++++++|++
T Consensus 105 ~~~~~~~~gi~v~~vd~~------d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~------gi~vivD~t 172 (380)
T PRK06176 105 FDKVLVKNGLSCTIIDTS------DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH------GLLTIVDNT 172 (380)
T ss_pred HHHHHHhcCeEEEEcCCC------CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc------CCEEEEECC
Confidence 34456678888777642 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+.+.. .. +. ..++|.++.|++||+++|.. .|+++.++++.. ..+.......+. ...
T Consensus 173 ~a~~~~---~~--p~---~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~-~~~~~~~~~~G~------------~~~ 231 (380)
T PRK06176 173 FATPYY---QN--PL---LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALA-QEIAFFQNAIGG------------VLG 231 (380)
T ss_pred cccccc---CC--cc---ccCCCEEEecCceeccCCccceeeEEEecHHHHH-HHHHHHHHHhcC------------CCC
Confidence 985432 11 11 23799999999999988764 576766554322 111100001110 112
Q ss_pred HHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+...|..++.+ +.+..+ +..++|+.+++.|++++.+++.+|
T Consensus 232 ~~~~~l~~~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~ 274 (380)
T PRK06176 232 PQDSWLLQRGI--KTLGLRMEAHQKNALCVAEFLEKHPKVEKVYY 274 (380)
T ss_pred HHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEEC
Confidence 34456555433 344433 788999999999999988876654
No 172
>PRK09105 putative aminotransferase; Provisional
Probab=99.76 E-value=9.1e-17 Score=155.42 Aligned_cols=244 Identities=18% Similarity=0.086 Sum_probs=163.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
++++.+.+++.+++.... .|. .+...+|+ +.+++.+|++++ .+++|+|+++++.+++.++.++
T Consensus 56 ~~~~~~~~a~~~~~~~~~-~Y~-~~~~~~Lr----~aia~~~~v~~e-----~I~it~Gs~~ai~~~~~~l~~~------ 118 (370)
T PRK09105 56 GPSPAARDAAARSAALSG-RYD-LELEDDLR----TLFAAQEGLPAD-----HVMAYAGSSEPLNYAVLAFTSP------ 118 (370)
T ss_pred CCCHHHHHHHHHHHHHhc-CCC-CchHHHHH----HHHHHHhCcChh-----hEEEcCChHHHHHHHHHHHcCC------
Confidence 345677777776664322 222 22344444 457788898763 4899999999999988887542
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~ 226 (369)
+++|++++|+|..+...++..|++++.+|++++ +.+|++++++. .+++++|++++|+||||.+.+.++|.+
T Consensus 119 -------gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 119 -------TAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD-GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 468999999999999999999999999998764 88999999887 567899999999999999999999888
Q ss_pred HHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc-CccCCC-CCCCeEEEEEeCCCCccccccccc
Q 017569 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS-GHKYGL-VYAGVGWVVWRTKDDLPDELVFHI 304 (369)
Q Consensus 227 l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~-~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~ 304 (369)
+++..++ ++|+++|++|..+.. .+ ...++....-+.+++. ..|.++ .++++|+++... +.. ..+..
T Consensus 190 l~~~~~~----~~~lIvDEaY~~f~~---~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~i-~~l~~-- 257 (370)
T PRK09105 190 LLANKPA----GSVLLVDEAYIHFSD---AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP-DLL-AKLAR-- 257 (370)
T ss_pred HHHhCCC----CcEEEEECchHHhcc---Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH-HHH-HHHHh--
Confidence 8864311 899999999965321 11 0112211234566664 557763 556799998632 222 22211
Q ss_pred CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH-HHH--HhhHHHHHHHHHHHhcCC
Q 017569 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI-PSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 305 ~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~-~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+ .. .+ .....+.+++..+..+++ ++. +..++.+++.+.|++.|+
T Consensus 258 -~-~~--------~~---~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~ 304 (370)
T PRK09105 258 -F-GH--------NP---LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKGY 304 (370)
T ss_pred -c-CC--------CC---cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 1 00 01 123344455555543333 333 666777788888887663
No 173
>PRK05968 hypothetical protein; Provisional
Probab=99.75 E-value=7.5e-17 Score=156.81 Aligned_cols=214 Identities=16% Similarity=0.095 Sum_probs=152.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...+||+. +++++|.+. .+++++|+.|+.+++.+...+ +++|+++.+.|..
T Consensus 63 p~~~~le~~----lA~l~g~~~-------av~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~y~~t~~~ 118 (389)
T PRK05968 63 PTVRAFEEM----LAKLEGAED-------ARGFASGMAAISSTVLSFVEP-------------GDRIVAVRHVYPDAFRL 118 (389)
T ss_pred hhHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHH
Confidence 344556655 899999875 577788889998888765431 4689999888775
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+...|+++++++.+ |++++++++ ++|++|++.+|+++++.+.|+++|+++|+++ ++++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~~------d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~------gi~vivD~a 185 (389)
T PRK05968 119 FETILKRMGVEVDYVDGR------DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRH------GVVTMIDNS 185 (389)
T ss_pred HHHHHHHcCceEEEeCCC------CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 335666779998888643 789999988 6789999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchh
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~ 323 (369)
|+.+.. ..| . ..++|.++.|++|++++|.+ .|+++. +++.. ..+.. ...+.+. . .
T Consensus 186 ~a~~~~--~~p---~---~~g~Divv~S~tK~l~g~~~~~gG~i~~-~~~~~-~~l~~~~~~~~g~---------~---~ 243 (389)
T PRK05968 186 WASPVF--QRP---I---TLGVDLVIHSASKYLGGHSDTVAGVVAG-SKEHI-ARINAEAYPYLGA---------K---L 243 (389)
T ss_pred Ccchhc--cCc---h---hcCCcEEEeeccccccCCCCeEEEEEEE-CHHHH-HHHHHHHHHhCCC---------C---C
Confidence 976442 111 1 23789999999999988755 576664 33332 11111 1112221 1 1
Q ss_pred HHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDT 365 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~ 365 (369)
....+|..++.+.. +..+ +..++|++++++|++++.++.-
T Consensus 244 ~~~~A~~~l~~L~t--l~~r~~~~~~~a~~la~~L~~~p~v~~v 285 (389)
T PRK05968 244 SPFEAWLLLRGLRT--LPLRMKAHEASALEIARRLKAHPVVERV 285 (389)
T ss_pred ChHHHHHHHcccCc--HHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 23555555555543 3333 8888999999999998877643
No 174
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=9e-17 Score=154.37 Aligned_cols=254 Identities=12% Similarity=0.064 Sum_probs=168.2
Q ss_pred ccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+...+.. +++.+.+++.+++......|. .++..+++++ +++++++++ ..+++|+|+++++.+++.+
T Consensus 27 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~~lr~a----ia~~~~~~~-----~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 27 IKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNADALRQA----IAAYYGLDP-----EQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred eeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHHHHHHH----HHHHhCCCH-----HHEEEcCCHHHHHHHHHHH
Confidence 4455444443 356788888877654333332 3344555544 777778765 3499999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+.++ ++.|++++++|..+...++..|++++.+|++++ +.+|++++++ .+++|++++|+||||
T Consensus 97 l~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~----~~~~v~~~~P~NPtG 158 (353)
T PRK05387 97 FFNH-------------DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD-FSIDVEDYLR----PNGGIIFPNPNAPTG 158 (353)
T ss_pred hcCC-------------CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC-CCCCHHHHHh----cCCEEEEeCCCCCCC
Confidence 7552 478999999999899889999999999999764 8999999864 457889999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDD 295 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~ 295 (369)
.+.+.+++.++++... ++++++|++|..+.. ...........-..+..+..|.++ .+..+|+++.. ++.
T Consensus 159 ~~~~~~~~~~l~~~~~-----~~~livDe~y~~~~~----~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~ 228 (353)
T PRK05387 159 IALPLAEIERILAANP-----DSVVVIDEAYVDFGG----ESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH-PEL 228 (353)
T ss_pred CCCCHHHHHHHHHhCC-----CcEEEEeCcccccCC----cchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC-HHH
Confidence 9999999999998742 899999999964321 100011111122466667899875 55788998853 322
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. +.+....... .. ++- ..+.++++...+.. +.+++. +..++.+++.+.|++.|+
T Consensus 229 ~-~~l~~~~~~~----~~----~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 285 (353)
T PRK05387 229 I-EALNRVKNSF----NS----YPL---DRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGF 285 (353)
T ss_pred H-HHHHHhhccC----CC----CCc---CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 2 2221100000 00 111 23344444444432 234444 677888899999988764
No 175
>PRK06855 aminotransferase; Validated
Probab=99.75 E-value=2.3e-16 Score=155.66 Aligned_cols=212 Identities=9% Similarity=-0.095 Sum_probs=152.1
Q ss_pred CCCccccccccC----CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 55 NPRLNLASFVTT----WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 55 ~p~~~l~~~~~~----~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
.+.++++.+.|. .+++.+.+++.+++.. ....|....+..++++++.+|+++..|.+.+. ..+++|+|+++|
T Consensus 32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~---~~I~it~G~~~a 108 (433)
T PRK06855 32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP---DDIIFFNGLGDA 108 (433)
T ss_pred ccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH---hHEEEcCcHHHH
Confidence 344555555552 3456678887777643 33456666789999999999999987876432 358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH-hhhcceeEEEeccC-CccccCHHHHHHHHh--hcCcE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENTIC 205 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~-~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~~~~ 205 (369)
+.+++. +.++ ++.|++++|+|+.+..+. ...|+.++.+|+++ +++.+|+++|++++. +++++
T Consensus 109 l~~~~~-l~~~-------------Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 109 IAKIYG-LLRR-------------EARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHH-hcCC-------------CCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 988764 3331 478999999998876543 34588888899874 457899999999997 35788
Q ss_pred EEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCc-EEEEcCccCCC
Q 017569 206 VAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVK-SINVSGHKYGL 280 (369)
Q Consensus 206 v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D-si~~~~hK~l~ 280 (369)
+++++|+||||.+.+ +++|+++|+++ ++||++|.+|+.+... ......... ...-. .+..|.-|.++
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~~--~~~~~sl~~~~~~~~~I~~~S~SK~~~ 246 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREY------DLFIICDEIYNNIVYN--GKKTVPLSEVIGDVPGIALKGISKELP 246 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccccccC--CCCCCCHHHHcCcCCeEEEecCccccC
Confidence 899999999999955 77788889999 9999999999875431 111111111 11112 34455789884
Q ss_pred -CCCCeEEEEEe
Q 017569 281 -VYAGVGWVVWR 291 (369)
Q Consensus 281 -~p~g~g~l~~~ 291 (369)
..+.+|++++.
T Consensus 247 ~pGlRiG~ii~p 258 (433)
T PRK06855 247 WPGSRCGWIEVY 258 (433)
T ss_pred CCcceEEEEEEe
Confidence 78999999974
No 176
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.75 E-value=5.9e-17 Score=156.38 Aligned_cols=248 Identities=13% Similarity=0.040 Sum_probs=160.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
.+..+++.+.+++++... .++...+||++ +++++|.+. .+.+++||.|+.+++.++.-.
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~----~a~~~g~~~-------~~~~~sgt~Al~~al~~l~~~--------- 63 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKE----FAEYFGVKY-------AVAVSSGTSALHLALRALGLG--------- 63 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHTTGG---------
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHH----HHHHhCCCe-------EEEeCChhHHHHHHHHhcCCC---------
Confidence 445677778887774432 26778888887 888899876 899999999999999985321
Q ss_pred CCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHH
Q 017569 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (369)
Q Consensus 150 ~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~ 229 (369)
.+++|++|..++.+...++...|+.+++++++++++.||+++++++|+++|++|+ +++..|.+.|+++|.++|+
T Consensus 64 ---~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~---~~h~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 64 ---PGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAIL---VVHLFGNPADMDAIRAIAR 137 (363)
T ss_dssp ---TTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEE---EE-GGGB---HHHHHHHHH
T ss_pred ---cCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEE---EecCCCCcccHHHHHHHHH
Confidence 2479999999999999999999999999999987899999999999999998887 4556788889999999999
Q ss_pred HhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc--CccCCCCCCCeEEEEEeCCCCccccc-ccccCc
Q 017569 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKDDLPDEL-VFHINY 306 (369)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~-~~~~~y 306 (369)
++ |++++.|+|++.+.. .... .... .-|.-++| ..|.+.++.| |++++++++...... ..+...
T Consensus 138 ~~------~i~lIeD~a~a~g~~--~~g~---~~G~-~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~ 204 (363)
T PF01041_consen 138 KH------GIPLIEDAAQAFGAR--YKGR---PVGS-FGDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGR 204 (363)
T ss_dssp HT------T-EEEEE-TTTTT-E--ETTE---ETTS-SSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTE
T ss_pred Hc------CCcEEEccccccCce--eCCE---eccC-CCCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCc
Confidence 99 999999999987654 2211 1111 12555555 5588865555 888887754432110 011111
Q ss_pred cCCCCCC------ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 307 LGSDQPT------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 307 ~~~~~~~------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
....... +..+... ..+.+...+..|. -+.+. +..++++++.+.|...+.+
T Consensus 205 ~~~~~~~~~~~~~~g~n~rm---~~~~AAigl~QL~--~L~~~~~~R~~~a~~y~~~L~~~~~~ 263 (363)
T PF01041_consen 205 SRDAFRRYRHELPPGYNFRM---SELQAAIGLAQLK--RLDEIIARRRENAQRYREALAGIPGI 263 (363)
T ss_dssp ETSECSTTEESSSS--B-B----BHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHTTGTTE
T ss_pred CccccccccccccCCccccc---HHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHhcCCCc
Confidence 1000000 1111111 1233333333332 23333 7789999999999998765
No 177
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=5.1e-17 Score=157.26 Aligned_cols=218 Identities=14% Similarity=0.052 Sum_probs=149.6
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC----Ccc
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN----VQV 165 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~----~h~ 165 (369)
.|...++|+. +++++|.+. .+++++|++|+..++.++..+ +++|+++.+ ++.
T Consensus 44 ~p~~~~L~~~----lA~l~g~~~-------~v~~~sG~~ai~~~l~al~~~-------------Gd~Vl~~~~~~~~ty~ 99 (376)
T PRK06460 44 NPTVLELTKK----IVELENAEM-------GVAFSSGMGAISTTALALLKP-------------GNSVLVHRDMFGRSYR 99 (376)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcCcHHH
Confidence 3455666655 889999874 456677789998887776442 468888864 444
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.+...++..|++++.++.+. .+.+++.+++++++|++++|+||+|.+.|+++|+++|+++ ++++++|+
T Consensus 100 ~~~~~~~~~G~~v~~~~~~~------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~------g~~vivDe 167 (376)
T PRK06460 100 FFTDYLKNWGVNVDASNPGS------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKEN------GSILIVDA 167 (376)
T ss_pred HHHHHHHhhCcEEEEECCCC------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 56677788899988887643 2345555677899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. .. .+ ..++|.++.+++|+++++.+ .|+++. +++.. +.+.......+ .+ .
T Consensus 168 a~~~~~~--~~-----~l-~~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~-~~l~~~~~~~g---------~~---~ 225 (376)
T PRK06460 168 TFSTPIN--QK-----PL-ELGADIVVHSASKFLAGHNDVIAGLAAG-YGKLL-NVIDQMRRTLG---------TS---L 225 (376)
T ss_pred CcCcccc--CC-----hh-hcCCCEEEeecceeccCCCCceEEEEec-CHHHH-HHHHHHHHhcC---------CC---C
Confidence 9875321 11 11 23579999999999865432 676664 33322 22211011111 01 1
Q ss_pred HHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
.+..+|.+++.+ +-+..+ +..++++++++.|++.+.+++.+|
T Consensus 226 ~~~~a~~~l~~~--~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~y 269 (376)
T PRK06460 226 DPHAAYLTLRGI--KTLKIRMDVINRNAEQIAEFLEGHPKVVKVYY 269 (376)
T ss_pred CHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHcCCCccEEEC
Confidence 234556655543 344444 899999999999999998877654
No 178
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.75 E-value=3.8e-16 Score=152.47 Aligned_cols=264 Identities=14% Similarity=0.030 Sum_probs=171.6
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|..+.+. ++++.+.+++.+..+ ....|....+..++++++.+++.+ .|...+ ...+++|+|+++|+.+++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~---~~~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 32 VYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE---PDEILITNGGSEAILFAMM 106 (397)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC---cceEEEcCChHHHHHHHHH
Confidence 3455555554 345667777776653 334455556788899888887763 454321 1358899999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-Cccc-cCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYV-MNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~-~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
++..+ +++|++++++|..+...++..|++++.++++. +++. .|+++|++++++++++|++++|+|
T Consensus 107 ~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~N 173 (397)
T PRK07568 107 AICDP-------------GDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGN 173 (397)
T ss_pred HhcCC-------------CCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCC
Confidence 76432 46899999999888888889999999999863 3344 368999999988999999999999
Q ss_pred CcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCC--Cc-EEEEcCccCCC-CCCCeE
Q 017569 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL--VK-SINVSGHKYGL-VYAGVG 286 (369)
Q Consensus 214 ~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~--~D-si~~~~hK~l~-~p~g~g 286 (369)
|||.+. ++++|+++|+++ ++++++|++|+.+.. -.+.........+ -. .+.-+..|.++ ...++|
T Consensus 174 PtG~~~~~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 174 PTGVVYTKEELEMLAEIAKKH------DLFLISDEVYREFVY--DGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred CCCccCCHHHHHHHHHHHHHC------CcEEEEeccchhccc--CCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 999985 488999999999 999999999987543 1111111111111 12 33446889876 467899
Q ss_pred EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++++.+++... .+..... . .+ +- ..+.+.++...+ +.+-++++ ...+..+++.+.|++.+
T Consensus 246 ~~~~~~~~~~~-~~~~~~~---~---~~----~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (397)
T PRK07568 246 CLISKNKELIA-AAMKLCQ---A---RL----SP---PTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIP 309 (397)
T ss_pred EEecCCHHHHH-HHHHHhh---c---cC----CC---CcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875443331 1110000 0 00 11 112222323333 23334444 56777788888887763
No 179
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.75 E-value=4.2e-16 Score=152.52 Aligned_cols=211 Identities=13% Similarity=-0.025 Sum_probs=151.3
Q ss_pred CccccccccCCC-hHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 57 RLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 57 ~~~l~~~~~~~~-~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
.++|+.+.|... ++.+.+.+.+.+.. ....|....+..++++++++|+.+.+|.+.+. +..+++|+|+++++.+++
T Consensus 35 ~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~--~~~I~it~G~~~al~~~~ 112 (403)
T PRK08636 35 IIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP--ETEVVATMGSKEGYVHLV 112 (403)
T ss_pred EEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEECCChHHHHHHHH
Confidence 355655555432 34455555544433 34556556788999999999999988876421 114899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHH----HHHHh---hcCcEE
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKA----VELVD---ENTICV 206 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L----~~~i~---~~~~~v 206 (369)
.++.++ ++.|++++|+|+.+...++..|++++.||++ ++++.+|++.+ +++++ ++++++
T Consensus 113 ~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i 179 (403)
T PRK08636 113 QAITNP-------------GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYV 179 (403)
T ss_pred HHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEE
Confidence 887652 5799999999999999999999999999985 23478998754 55554 367899
Q ss_pred EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCC---CcEEEEcCccCC-
Q 017569 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL---VKSINVSGHKYG- 279 (369)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~---~Dsi~~~~hK~l- 279 (369)
+++.|+||||.+-+ +++|.++|+++ ++|+++|.+|+.+... ......-..+.. .-..+.+.-|.+
T Consensus 180 ~~~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 180 VVNFPHNPTTATVEKSFYERLVALAKKE------RFYIISDIAYADITFD--GYKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccchhhccC--CCCCCChhcCCCccccEEEEEecccccC
Confidence 99999999999854 67888999999 9999999999875431 101011011111 112245788998
Q ss_pred CCCCCeEEEEE
Q 017569 280 LVYAGVGWVVW 290 (369)
Q Consensus 280 ~~p~g~g~l~~ 290 (369)
.....+|+++.
T Consensus 252 ~~GlRiG~iv~ 262 (403)
T PRK08636 252 MAGWRVGFVVG 262 (403)
T ss_pred CccceeeeeeC
Confidence 57789999875
No 180
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.75 E-value=3.7e-17 Score=156.57 Aligned_cols=250 Identities=14% Similarity=0.019 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHhcc--C--CCCCCC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCC-chHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMASINK--N--YVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLAFKRK 140 (369)
Q Consensus 69 ~~~v~~~~~~~~~~--n--~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~G-gt~a~~~al~~~~~~ 140 (369)
|..+.+.+.+++.+ | ...+.. ++...++-+++++.+++++|.+.+ ...++++| ||+|+..++..+..+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN----YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcCCC
Confidence 45677777766642 1 122221 234558888999999999998532 34677766 999998888876432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcc--hHHHHHhhhcceeEEEeccCC---ccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQV--CWEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~--s~~~~~~~~G~~v~~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+.++++-..+.+ .+.+.++.+|+ +..+..++. .-.+|+++++ +++++++|.+++..|.|
T Consensus 80 -------------~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETst 143 (349)
T TIGR01364 80 -------------GKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIH 143 (349)
T ss_pred -------------CCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcc
Confidence 233333222222 35677888899 887776521 1245666655 35678999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
|...| ++++.+ +++++||++++.+..| ++++ ..|.+++++||++ +|+|.|+++++++.+
T Consensus 144 Gv~~~-----~l~~~~------~~l~iVDavss~g~~~-------id~~--~~d~~~~ssqK~l-gP~Glg~l~~s~~~~ 202 (349)
T TIGR01364 144 GVEFR-----ELPDVK------NAPLVADMSSNILSRP-------IDVS--KFGLIYAGAQKNI-GPAGLTVVIVRKDLL 202 (349)
T ss_pred cEecc-----eecccC------CCeEEEEccccccCcc-------CCHH--HccEEEEeccccc-CCCceEEEEECHHHH
Confidence 99876 677778 9999999999876652 3433 4679999999998 599999999987522
Q ss_pred cccccccccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 296 LPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
- ..-.....|.... ..+....+|.+...+.++..+|+.+..+ |++.+ |+.++++++++.|++++
T Consensus 203 ~-~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 271 (349)
T TIGR01364 203 G-RASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSN 271 (349)
T ss_pred h-hcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1000111111100 0111233789998999999999999888 79999 99999999999999995
No 181
>PRK04311 selenocysteine synthase; Provisional
Probab=99.75 E-value=2e-16 Score=155.89 Aligned_cols=194 Identities=16% Similarity=0.124 Sum_probs=135.9
Q ss_pred CChHHHHHHHHHHhccCC-CCCC--CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY-VDMD--EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~-~~~~--~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
+.++.+.+++.+++.... ..+. ........ ..+.+.+++++|.+. .+++++|+.|+.+++.++ .
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~-~~~e~~lA~l~Gae~-------a~vv~sgtaAl~l~l~~l-~---- 163 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRD-RALAALLCALTGAED-------ALVVNNNAAAVLLALNAL-A---- 163 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHH-HHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHh-C----
Confidence 445778888887775432 1111 11122222 356677999999974 688889999998877553 1
Q ss_pred HHHhcCCCCCCCeEEecCCCcch------HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC--c
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVC------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL--T 215 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~--t 215 (369)
.+++||++...|+. +...++..|+++++++.+. ..++++++++|+++|++|++.+++|+ +
T Consensus 164 ---------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~---~t~~~dle~aI~~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 164 ---------AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN---RTHLRDYEQAINENTALLLKVHTSNYRIE 231 (464)
T ss_pred ---------CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC---CCCHHHHHHhcCccCeEEEEEcCCCcccc
Confidence 14689999876652 3345667799998887642 45799999999999999999999997 3
Q ss_pred c--cCCCHHHHHHHHHHhhhccCCCceEEeecccccccc--cccCCCcc--ccccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 216 G--~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~--~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
| ...|+++|+++|+++ ++++++|++.|...- .+..+..+ .+....++|.+++|+|||+++|. +|+++
T Consensus 232 G~~~~~dl~eI~~lak~~------gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~ 304 (464)
T PRK04311 232 GFTKEVSLAELAALGKEH------GLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIV 304 (464)
T ss_pred ccCCcCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEE
Confidence 4 567999999999999 999999997554210 01000111 11113589999999999998885 78888
Q ss_pred EeC
Q 017569 290 WRT 292 (369)
Q Consensus 290 ~~~ 292 (369)
.++
T Consensus 305 g~~ 307 (464)
T PRK04311 305 GKK 307 (464)
T ss_pred EcH
Confidence 764
No 182
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.75 E-value=4.6e-17 Score=156.83 Aligned_cols=254 Identities=13% Similarity=0.001 Sum_probs=167.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe-CCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..++.+.+++......-..-...++...++.+++++.+++++|++.+ ..++++ .+||.++..++..+...
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~f~~gs~T~a~~~~~~~l~~~----- 83 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG----YEVILGNGGATAFWDAATFGLIEK----- 83 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchhHHHHHHHHhcccc-----
Confidence 34566666654221011100123456678888999999999999642 346776 55999999888776421
Q ss_pred HhcCCCCCCCeEEecCCCcc-hHHHHHhhh--cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHH
Q 017569 146 KEQGKPYDKPNIVTGANVQV-CWEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~-s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~ 222 (369)
..++++.-.|. .+.+.+... +.+++.++++.. ..++. .+.+++++|.+++.+|.||.+.|++
T Consensus 84 ---------~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~ 148 (361)
T TIGR01366 84 ---------KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG-SAPEP-----QADPGVDVIAWAHNETSTGVAVPVR 148 (361)
T ss_pred ---------cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC-CCCCC-----ccCCCCCEEEEcccCCccceecccc
Confidence 23333333443 244445542 236788877643 33333 3567899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc-cccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP-DELV 301 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~ 301 (369)
+| ++++ +++++||++++.+.. +.+++ .+|.+++++|||+++|+|.++++++++.... ..+.
T Consensus 149 ~I---~~~~------g~~~iVDavqs~g~~-------~idv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~ 210 (361)
T TIGR01366 149 RP---EGSD------DALVVIDATSGAGGL-------PVDIA--ETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIA 210 (361)
T ss_pred cc---cccC------CCeEEEEcCccccCC-------CCCHH--HCCEEEEEchhhcCCCCceEEEEECHHHHhhhhccc
Confidence 88 4788 999999999987665 34444 4899999999999988888887777642210 0000
Q ss_pred cc----cCccCC-----CCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 302 FH----INYLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 302 ~~----~~y~~~-----~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
.. +.|+.. ........+|.+....+++..+++.+..+ |+..+ ++.+++++++++|++.+++
T Consensus 211 ~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~ 283 (361)
T TIGR01366 211 ASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYA 283 (361)
T ss_pred CCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 00 011100 00011223566666667889999999888 68887 9999999999999999964
No 183
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=8.9e-17 Score=154.85 Aligned_cols=247 Identities=16% Similarity=0.079 Sum_probs=164.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++.+.++... +....+..+++++ +++++++++ ...++|+|+++++..++.++.++
T Consensus 43 ~~~~v~~a~~~~~~~~~--~~p~~g~~~lr~~----ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~~------- 104 (359)
T PRK03158 43 PSPKVKEAIAAHLDELA--LYPDGYAPELRTK----VAKHLGVDE-----EQLLFGAGLDEVIQMISRALLNP------- 104 (359)
T ss_pred CCHHHHHHHHHHHHHhh--cCCCCcHHHHHHH----HHHHhCCCH-----HHEEECCCHHHHHHHHHHHHhCC-------
Confidence 45667888777765422 2233466666655 666677765 24899999999998877776432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l 227 (369)
++.|+++.++|..+...+...|++++.+|++ ++.+|++++++++++++++|++++|+||||.+.+.++|.++
T Consensus 105 ------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~ 176 (359)
T PRK03158 105 ------GTNTVMAEPTFSQYRHNAIIEGAEVREVPLK--DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSF 176 (359)
T ss_pred ------CCEEEEcCCCHHHHHHHHHHcCCeEEEEecC--CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 4689999999999999999999999999997 36899999999998899999999999999999999999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCc
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINY 306 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y 306 (369)
++.... ++++++|++|..+...-..+.....+....-..+..+..|.++ .+..+|+++..+ +.. +.+...
T Consensus 177 ~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~--- 247 (359)
T PRK03158 177 LESVPS----HVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNIA--- 247 (359)
T ss_pred HHhCCC----CcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH-HHH-HHHHHh---
Confidence 987411 8999999999875431000100001111122344456789875 457789988642 222 222110
Q ss_pred cCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH-HHH--HhhHHHHHHHHHHHhcC
Q 017569 307 LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI-PSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 307 ~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~-~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. .+ + ...+.+.++...+....+ ++. ...+..+++.+.|.+.|
T Consensus 248 -~~---~~---~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 293 (359)
T PRK03158 248 -RP---PF---N----TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG 293 (359)
T ss_pred -cC---CC---C----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 00 01 1 124455555555543333 333 44566677778887765
No 184
>PLN02231 alanine transaminase
Probab=99.74 E-value=2.2e-16 Score=158.91 Aligned_cols=210 Identities=10% Similarity=0.020 Sum_probs=154.8
Q ss_pred ccccccccCCChHHHHHHHHHHhcc----CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 58 LNLASFVTTWMEPECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 58 ~~l~~~~~~~~~~~v~~~~~~~~~~----n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
+++....+.++...+..+ .+.+.. ..+.|..+.|..++++++.+|+.+..|.+.+. .++++|+|+++|+.++
T Consensus 132 i~~~~~~~~fp~~~i~~a-~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p---e~I~iT~Ga~~ai~~~ 207 (534)
T PLN02231 132 LDKSETHGLFSADAIERA-WQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADP---NDIFLTDGASPAVHMM 207 (534)
T ss_pred CCCCCccccCCHHHHHHH-HHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCc---ccEEEeCCHHHHHHHH
Confidence 455444444444333333 344443 23557777899999999999999888876532 4589999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh------cCcEE
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICV 206 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v 206 (369)
+.++... .++.|+++.|+|+.+...++..|+.++.+++++ ++|.+|+++|++++++ +++++
T Consensus 208 ~~~l~~~------------~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~i 275 (534)
T PLN02231 208 MQLLIRS------------EKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRAL 275 (534)
T ss_pred HHHhccC------------CCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEE
Confidence 8887531 147899999999999999999999999999985 3589999999999976 67889
Q ss_pred EEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C--------CCCcEEEE-
Q 017569 207 AAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--------PLVKSINV- 273 (369)
Q Consensus 207 ~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--------~~~Dsi~~- 273 (369)
+++.|+||||.+- .+++|.++|+++ ++++++|++|..... ........+. + .....+++
T Consensus 276 vl~nP~NPTG~vls~e~l~~Iv~~a~~~------~l~lI~DEvY~~l~y--~~~~~~~s~~~~~~~~g~~~~~~~vi~l~ 347 (534)
T PLN02231 276 VVINPGNPTGQVLAEENQRDIVEFCKQE------GLVLLADEVYQENVY--VPDKKFHSFKKVARSMGYGEKDISLVSFQ 347 (534)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhccc--CCCCCcccHHHHHhhhccccCCceEEEEe
Confidence 9999999999984 588899999999 999999999987554 1111111111 1 11224544
Q ss_pred cCccCC--CCCCCeEEEEEe
Q 017569 274 SGHKYG--LVYAGVGWVVWR 291 (369)
Q Consensus 274 ~~hK~l--~~p~g~g~l~~~ 291 (369)
|.-|.+ .+++.+|++++.
T Consensus 348 S~SK~~~g~pGlRiGy~~~~ 367 (534)
T PLN02231 348 SVSKGYYGECGKRGGYMEVT 367 (534)
T ss_pred ccCcccccCCccceEEEEEe
Confidence 578943 468999999863
No 185
>PLN02242 methionine gamma-lyase
Probab=99.74 E-value=3.6e-17 Score=160.07 Aligned_cols=214 Identities=14% Similarity=-0.014 Sum_probs=150.1
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||+. +++++|.+. .++++||++|+..++.++..+ +++|+++.+.|..+..
T Consensus 75 ~Pt~~~LE~~----lA~l~g~~~-------~l~~~sG~~Ai~~al~al~~~-------------GD~Vl~~~~~Y~~~~~ 130 (418)
T PLN02242 75 NPTVLNLGRQ----MAALEGTEA-------AYCTASGMSAISSVLLQLCSS-------------GGHVVASNTLYGGTHA 130 (418)
T ss_pred ChhHHHHHHH----HHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHH
Confidence 3455666655 899999986 689999999999998887542 4789999998877655
Q ss_pred HH-----hhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 170 FA-----RYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 170 ~~-----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
.+ +..|++++.++.+ |+++|++++++ +|++|++++++||+|.+.|+++|+++|+++ ++++++
T Consensus 131 ~~~~~~~~~~G~~~~~~d~~------d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------gi~liv 198 (418)
T PLN02242 131 LLAHFLPRKCNITTTFVDIT------DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEK------GVTVVV 198 (418)
T ss_pred HHHHhhhhccCceEEEcCCC------CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHh------CCEEEE
Confidence 44 3467777666542 78999999988 599999999999999999999999999999 999999
Q ss_pred ecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcc
Q 017569 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~ 321 (369)
|++|+.+.. .+ . ..++|.++.+.+|+++++.. .|+++.+ ++.. ..+.. +.... ....|..
T Consensus 199 Dea~~~~~~---~~---~---~~g~divv~S~SK~l~g~g~~~gG~iv~~-~~li-~~l~~---~~~~~---~~~~g~~- 260 (418)
T PLN02242 199 DNTFAPMVL---SP---A---RLGADVVVHSISKFISGGADIIAGAVCGP-AELV-NSMMD---LHHGA---LMLLGPT- 260 (418)
T ss_pred ECCCCccCC---CH---H---HcCCcEEEEeCccccCCCCCceEEEEEcC-HHHH-HHHHH---Hhhhh---hhccCCC-
Confidence 999964321 11 1 12689999999999876643 4766643 3222 12111 10000 0011221
Q ss_pred hhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+..+|..++.+. -+..+ +..+++++++++|++.|
T Consensus 261 -~~~~~A~l~~~~l~--tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 261 -MNPKVAFELSERLP--HLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred -CCHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 12344454444433 33333 88999999999999986
No 186
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.74 E-value=2.2e-16 Score=153.43 Aligned_cols=262 Identities=13% Similarity=0.021 Sum_probs=169.0
Q ss_pred CCCCccccccc-cCC-ChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 54 GNPRLNLASFV-TTW-MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 54 ~~p~~~l~~~~-~~~-~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
++..++|.... ++. +++.+.+++.++++.. ...+....+...+.+++.+++++++|.+. .++.++|++
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~-------~i~~~sG~~ 104 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA-------ALVFQSGFN 104 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHHH
Confidence 44445555443 333 4577788877777543 22333445778899999999999999653 344455588
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCc
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI 204 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~ 204 (369)
++..++.++..+ ++.|+++.++|.++...+...|+++..++ .+|++++++.+.+ +++
T Consensus 105 a~~~a~~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~~~ 165 (385)
T TIGR01825 105 TNQGVLSALLRK-------------GDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYGKK 165 (385)
T ss_pred HHHHHHHHhCCC-------------CCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCCCe
Confidence 888777766432 46899999999999888888888776553 4677888887764 578
Q ss_pred EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-CC-ccccccCCCCcEEEEcCccCCCCC
Q 017569 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PD-LEWDFRLPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~-~~~~~~~~~~Dsi~~~~hK~l~~p 282 (369)
+|++....|++|.+.|+++|.++|+++ ++++++|++|+.+..+... +. ...++. ...|.+..+.+|+++++
T Consensus 166 ~v~~~~v~~~tG~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~ 238 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAPLPEIVELAERY------GAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVV 238 (385)
T ss_pred EEEEecCCcCCCCccCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcC
Confidence 888888899999999999999999999 9999999999765442100 00 011222 45788888999998543
Q ss_pred CCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcC
Q 017569 283 AGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g 360 (369)
| |+++.+ ++.. ..+... ..|. ..+..+....+++..+++.+.... ... +..++.+++++.|+++|
T Consensus 239 -g-G~~~~~-~~~~-~~~~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~~~~-~~~~~~~~~~~~l~~~L~~~g 305 (385)
T TIGR01825 239 -G-GYAAGH-KELI-EYLKNRARPFL--------FSTAQPPAVVAALAAAVDELQRSP-ELMERLWDNTRFFKAGLGKLG 305 (385)
T ss_pred -C-CEEecC-HHHH-HHHHHhCcccc--------ccCCCCHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHcC
Confidence 3 666543 2222 222111 1111 111111222344445555543221 223 66778899999998875
Q ss_pred C
Q 017569 361 Y 361 (369)
Q Consensus 361 ~ 361 (369)
+
T Consensus 306 ~ 306 (385)
T TIGR01825 306 Y 306 (385)
T ss_pred C
Confidence 3
No 187
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.74 E-value=8.9e-17 Score=156.08 Aligned_cols=203 Identities=20% Similarity=0.129 Sum_probs=146.4
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
.++|+...+. ++++.+.+++.++++... ..|....+..++++ ++++++|+++ ..+++|+|+++++..++
T Consensus 30 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~----~ia~~l~~~~-----~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 30 MIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRE----LILKDLGLDD-----DEALITAGATESLYLVM 100 (380)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHH----HHHHhcCCCC-----CcEEEeCCHHHHHHHHH
Confidence 3445544333 345778888888876532 22322334455554 4788888876 24899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc--CCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
.++..+ ++.|++++++|..+...++..|++++.+|++ ++++.+|++++++++++++++|++++|+
T Consensus 101 ~~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~ 167 (380)
T PRK06225 101 RAFLSP-------------GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPL 167 (380)
T ss_pred HHhcCC-------------CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCC
Confidence 876431 4689999999998888889999999999974 2347899999999999999999999999
Q ss_pred CCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 213 TLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 213 ~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
||||.+. ++++|+++|+++ ++++++|++|+.+... .+. .... .........++.|+++ .+.+.|++
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~-~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i 237 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDN------DAFLLHDCTYRDFARE--HTL-AAEY-APEHTVTSYSFSKIFGMAGLRIGAV 237 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHC------CcEEEEehhHHHHhcc--CCc-hhhc-CCCCEEEEeechhhcCCccceeEEE
Confidence 9999974 599999999999 9999999999754321 010 0111 1122344456789984 33457999
Q ss_pred EEe
Q 017569 289 VWR 291 (369)
Q Consensus 289 ~~~ 291 (369)
+.+
T Consensus 238 ~~~ 240 (380)
T PRK06225 238 VAT 240 (380)
T ss_pred ecC
Confidence 874
No 188
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.74 E-value=3.4e-16 Score=151.89 Aligned_cols=247 Identities=11% Similarity=-0.053 Sum_probs=160.7
Q ss_pred ChHHHHHHHHHHhccCCC---CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
++|.+.+++.+++..... .+....+...+..++++++++++|.+. .+++++|++++..++.++.+
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~g~~~~~~~l~~~~~----- 121 (385)
T PRK05958 54 RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER-------ALLFSSGYAANLAVLTALAG----- 121 (385)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHhCC-----
Confidence 457788888877754211 111122445566778888999998542 67777888888776655432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc---CcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~l 221 (369)
.+++|++++++|.++..++...|++++.+|. .|++.+++.+++. +.++++..+.|++|.+.++
T Consensus 122 --------~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l 187 (385)
T PRK05958 122 --------KGDLIVSDKLNHASLIDGARLSRARVRRYPH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPL 187 (385)
T ss_pred --------CCCEEEEeCccCHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCH
Confidence 1468999999999999999999999888764 2788999998763 5566666788999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--ccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
++|+++|+++ ++++++|++|+.+.++....... ..+....-+.+..+.+|+++ +.| |+++.. ++.. +.
T Consensus 188 ~~i~~ia~~~------~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G-g~~~~~-~~~~-~~ 257 (385)
T PRK05958 188 AELVALARRH------GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SSG-AAVLGS-ETLI-DY 257 (385)
T ss_pred HHHHHHHHHh------CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cCC-cEEEcC-HHHH-HH
Confidence 9999999999 99999999997554321000000 11211122355677999985 445 666543 2222 12
Q ss_pred cccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 300 LVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 300 ~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+... ..+. ..++.+....++++++++.+... .++ +..++.+++.+.|++.|
T Consensus 258 ~~~~~~~~~--------~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~ 311 (385)
T PRK05958 258 LINRARPFI--------FTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALG 311 (385)
T ss_pred HHHhCccce--------ecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC
Confidence 1110 0111 11222233345566667666432 233 88889999999999876
No 189
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.4e-16 Score=153.37 Aligned_cols=244 Identities=15% Similarity=0.126 Sum_probs=165.5
Q ss_pred CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
++++.+.+.+.+++..+ ...|.. ++..++++. +++++|.+.+ ..+++|+|+++++.+++.++.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~----ia~~~~~~~~----~~I~~t~G~~~~i~~~~~~~~~~----- 104 (356)
T PRK04870 39 RLPAELRAELGERLAEVALNRYPD-PRAAALKAA----LRAAMGVPAG----ADVLLGNGSDELIQLLALACAKP----- 104 (356)
T ss_pred CCCHHHHHHHHHHhhccccccCCC-CCHHHHHHH----HHHHhCcCCC----CcEEEcCCHHHHHHHHHHHhcCC-----
Confidence 45678889888887543 333432 455555555 6777787642 24889999999998887776442
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHH
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
+++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++.+ ++++|++++|+||||.+.+.+++
T Consensus 105 --------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~ 175 (356)
T PRK04870 105 --------GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADV 175 (356)
T ss_pred --------CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHH
Confidence 478999999999999999999999999999864 89999999999964 78999999999999999999999
Q ss_pred HHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc
Q 017569 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (369)
Q Consensus 225 ~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 303 (369)
.++++.. ++++++|++|..+.. ......+. ... -.+..+..|++..+...|+++..+ +.+ ..+...
T Consensus 176 ~~i~~~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i-~~~~~~ 242 (356)
T PRK04870 176 ERIIEAA------PGLVVVDEAYQPFAG----DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWI-AELDKV 242 (356)
T ss_pred HHHHHHC------CCEEEEECCchhhcC----cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHH-HHHHHc
Confidence 9999887 889999999975432 11001111 112 244556889766566789987642 222 222110
Q ss_pred cCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 304 ~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
. . .+ +- ..+.+.++...+.. +-+++. +..++.+++.+.|++++
T Consensus 243 ~---~----~~----~~---~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (356)
T PRK04870 243 R---P----PY----NV---NVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALP 288 (356)
T ss_pred c---C----CC----cC---CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 0 0 00 00 12223333333322 224444 67778888888888763
No 190
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.5e-16 Score=147.86 Aligned_cols=253 Identities=12% Similarity=0.044 Sum_probs=175.2
Q ss_pred ChHHHHHHHHHHhcc-C----C--CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINK-N----Y--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~-n----~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.++.+.++.-+-+.+ . + -+|+.-....++|..+.+...++||++.. -+=..+|+.||..++.++.++
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~a------nVQPhSGs~AN~av~~All~p 111 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYA------NVQPHSGSQANQAVYLALLQP 111 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcc------ccCCCCchHHHHHHHHHHcCC
Confidence 346677766655432 1 1 11222235689999999999999999963 233458899999999888763
Q ss_pred HHHHHHhcCCCCCCCeEEecC---CCcchHHHHHhhhc--ceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCC
Q 017569 141 WQQKRKEQGKPYDKPNIVTGA---NVQVCWEKFARYFE--VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~---~~h~s~~~~~~~~G--~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (369)
++.|+-.+ -.|-+.-......| .++...+++++++.+|.|++++.+.+ +|++|+ .|.+.
T Consensus 112 -------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii--~G~Sa 176 (413)
T COG0112 112 -------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLII--AGGSA 176 (413)
T ss_pred -------------CCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEE--ECccc
Confidence 45666443 34443332223333 35666777877799999999998876 788776 45555
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
.-..-|++++.++|++. |.++.+|.|+-.+.. ....++.. ++.+|.+|.++||.+.+|.| |++++++.+
T Consensus 177 Y~r~id~~~~reIad~V------GA~L~~DmAHiaGLV--A~G~~p~P--~~~AdvVTtTTHKTlrGPrG-G~Il~~~ee 245 (413)
T COG0112 177 YSRPIDFKRFREIADEV------GAYLMVDMAHVAGLI--AGGVHPNP--LPHADVVTTTTHKTLRGPRG-GIILTNDEE 245 (413)
T ss_pred cccccCHHHHHHHHHHh------CceEEehHHHHHHHH--hcccCCCC--CCccceEeCCcccCCCCCCc-eEEEeccHH
Confidence 55667999999999999 999999999765544 11111222 55799999999999999998 788777633
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+. ..+. .+-| +.++|..-...+++...+++.....+|++. +..+||+-|++.|.+.||
T Consensus 246 l~-kkin-~aVF-------Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~ 305 (413)
T COG0112 246 LA-KKIN-SAVF-------PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGF 305 (413)
T ss_pred HH-HHhh-hhcC-------CccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 32 1110 0111 122344445567788889998888899888 999999999999999886
No 191
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=2e-16 Score=152.89 Aligned_cols=199 Identities=12% Similarity=-0.018 Sum_probs=149.5
Q ss_pred CChHHHHHHHHHHhcc---CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
++++.+.+++.+++.. ....| ..++...+++++.+|+.+.+|.+.+. ..+++|+|+++++.+++.++.++
T Consensus 39 ~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~---~~I~it~G~~~~l~~~~~~~~~~--- 111 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTV---ENVWAANGSNEILQQLLQAFGGP--- 111 (368)
T ss_pred CCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCCh---hhEEECCCHHHHHHHHHHHhcCC---
Confidence 4457788888877643 23333 23577889999999998887765422 35899999999999988887652
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHH
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 222 (369)
++.|+++.|+|..+...++..|++++.++.++ ++.+|++++++++.+ ++++|+++.|+||||.+.+.+
T Consensus 112 ----------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~ 180 (368)
T PRK03317 112 ----------GRTALGFVPSYSMHPIIARGTHTEWVEGPRAA-DFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180 (368)
T ss_pred ----------CCEEEEeCCChHHHHHHHHhcCCeeEEcccCC-CCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 47899999999999999999998888887654 489999999999974 688999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEE-EcCccCCC-CCCCeEEEEEe
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN-VSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~-~~~hK~l~-~p~g~g~l~~~ 291 (369)
++.++++.. ++++++|++|+.+... ............-+.+. .+..|.++ .+...|+++..
T Consensus 181 ~l~~l~~~~------~~~lI~DE~y~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 181 DVEAILDAA------PGIVVVDEAYAEFRRS--GTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred HHHHHHHHC------CceEEEeCCchhhccc--CCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC
Confidence 999999999 9999999999875321 00001111101113443 36889875 56778888863
No 192
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=3.8e-16 Score=153.28 Aligned_cols=227 Identities=15% Similarity=0.055 Sum_probs=155.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...+||+ .+++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|..
T Consensus 57 p~~~~le~----~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vl~~~~~y~~t~~~ 112 (418)
T TIGR01326 57 PTTDVLEQ----RIAALEGGVA-------ALAVASGQAAITYAILNLAQA-------------GDNIVSSSYLYGGTYNL 112 (418)
T ss_pred hhHHHHHH----HHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHHH
Confidence 44445554 4899999764 799999999999988877542 4688888887643
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+...|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 113 ~~~~~~~~G~~v~~v~~~------d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~------~i~livD~t 180 (418)
T TIGR01326 113 FKHTLKRLGIEVRFVDPD------DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAH------GVPLIVDNT 180 (418)
T ss_pred HHHHHHHcCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 345567789998888742 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCC-CCC-----------
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSD-QPT----------- 313 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~-~~~----------- 313 (369)
|+.+.. ..+ + ..++|.++.+++||++++ ...|.+++...... ..... ...+... ..+
T Consensus 181 ~~~~~~--~~~-----l-~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~-~~~~~-~~~~~~~~~~q~a~~~~~~~~~ 250 (418)
T TIGR01326 181 FATPYL--CRP-----I-DHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD-WANGR-FPLFTTPDPSYHGLVFTETFGN 250 (418)
T ss_pred Cchhhc--CCc-----h-hcCCeEEEECccccccCCccceEEEEEeccccc-ccccc-cccccCCCCccccchhhhhhch
Confidence 975422 111 1 237899999999999763 44677777543221 11000 0000000 000
Q ss_pred -----------ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 314 -----------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 314 -----------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
....|... .+...|..++.+. .+..+ +..++|..++++|.+.+.+++-+|
T Consensus 251 ~~~~~~~~~~~~~~~G~~~--~p~~a~~~~~~l~--tl~~R~~~~~~~a~~la~~L~~~~~V~~V~y 313 (418)
T TIGR01326 251 PAFIVKARVQLLRDLGAAL--SPFNAFLLLQGLE--TLSLRMERHVENALKVAEFLEAHPKVAWVNY 313 (418)
T ss_pred hhHHHHHHHHHHHhcCCCC--CHHHHHHHHCCcc--cHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 00001111 2455666555553 34333 666899999999999988776544
No 193
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.73 E-value=5.8e-16 Score=148.70 Aligned_cols=248 Identities=11% Similarity=-0.040 Sum_probs=160.2
Q ss_pred ChHHHHHHHHHHhccCCCCCCC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.++.+.+++.++++.....+.. ..+...+..++++.+++++|.+. .+++++|++++..++.++..
T Consensus 31 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~G~~~~~~~l~~~~~----- 98 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA-------ALLFSSGYLANVGVISALVG----- 98 (360)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC-------EEEECchHHHHHHHHHHhCC-----
Confidence 3477888888877542222111 12334455567777888888643 45556668887766655432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCcccCCC
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (369)
.+++|++++++|.++...++..|++++.++. +|+++|++.+++ ++++|++..++|++|.+.|
T Consensus 99 --------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~ 164 (360)
T TIGR00858 99 --------KGDLILSDALNHASLIDGCRLSGARVRRYRH------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP 164 (360)
T ss_pred --------CCCEEEEEccccHHHHHHHHhcCCceEEecC------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC
Confidence 1468999999999999999999999887763 478899998875 4678888888999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-c-cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-L-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~-~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~ 298 (369)
+++|.++|+++ ++++++|++|+.+..+..... . ...+.....+.+..+.+|+++. .| |+++.++ +.. .
T Consensus 165 ~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~g-G~~~~~~-~~~-~ 234 (360)
T TIGR00858 165 LPQLVALAERY------GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YG-AYVAGSQ-ALI-D 234 (360)
T ss_pred HHHHHHHHHHc------CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cC-cEEEcCH-HHH-H
Confidence 99999999999 999999999975443211000 0 0111123567888899999854 44 7776532 222 1
Q ss_pred ccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 299 ELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 299 ~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+... ..+. ..++.+....+++.++++.+.. ..++ +..++.+++.+.|+++|+
T Consensus 235 ~~~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~ 290 (360)
T TIGR00858 235 YLINRARTLI--------FSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEALGF 290 (360)
T ss_pred HHHHhCccce--------ecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21110 0110 1111222223444555654432 2233 889999999999998763
No 194
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=2e-16 Score=152.72 Aligned_cols=259 Identities=19% Similarity=0.104 Sum_probs=167.1
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..+.|....+. ++++.+.+++.+++.... .| ...+..+++++ +++.+|+++ ..+++|+|+++++.+++
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~-~Y-p~~g~~~Lr~a----ia~~~~~~~-----~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA-LY-PDGGATTLRQT----IANKLHVKM-----EQVLCGSGLDEVIQIIS 98 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC-cC-CCCCHHHHHHH----HHHHhCCCc-----ceEEECCCHHHHHHHHH
Confidence 33445444444 345778888777654422 22 23455566655 666778876 34899999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.++.++ ++.|++++|+|..+...++..|++++.||++. +.+|+++|++++++++++|++++|+||
T Consensus 99 ~~l~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~~~~~v~i~~P~NP 163 (366)
T PRK01533 99 RAVLKA-------------GDNIVTAGATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDNDTKIVWICNPNNP 163 (366)
T ss_pred HHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCcCCcEEEEeCCCCC
Confidence 887542 46899999999999999999999999999863 579999999999889999999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~ 293 (369)
||.+.+.+++.++++...+ +.++++|.+|..+...--.+.....+....--.+.-+.-|.++ .+...|+++.. +
T Consensus 164 TG~~~~~~~l~~l~~~~~~----~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~ 238 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISE----NTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-E 238 (366)
T ss_pred CCCCcCHHHHHHHHHhCCC----CCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-H
Confidence 9999887777777664311 3467789999754321000000001111111234445788865 67788988763 2
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHH-HH--HhhHHHHHHHHHHHhcC
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIP-SF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~-~~--~~~~~a~~l~~~L~~~g 360 (369)
+.. ..+.. . .. . + ....+.+.++...+....+. +. ...+..+++.+.|+++|
T Consensus 239 ~~~-~~l~~---~-~~---~----~---~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g 293 (366)
T PRK01533 239 ELI-EKLNV---V-RL---P----F---NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE 293 (366)
T ss_pred HHH-HHHHH---h-cC---C----C---CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222 22211 0 00 0 1 11345666666666443333 22 55666777778887765
No 195
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.73 E-value=2.5e-16 Score=152.07 Aligned_cols=253 Identities=11% Similarity=0.046 Sum_probs=162.0
Q ss_pred hHHHHHH-HHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 69 EPECDKL-VMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~-~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+.+.+. +..+.-.. -.|..++...+||++ +++++|.+. .+.|++|+.|+.++..+...
T Consensus 49 T~aMs~~q~a~~~~GD-e~yag~~s~~~lE~~----va~~~G~~~-------av~v~sGT~Al~ll~~l~l~-------- 108 (450)
T TIGR02618 49 TNAMSDKQWAGLMMGD-EAYAGSRNFYHLERT----VRELYGFKY-------VVPTHQGRGAENLLSQIAIK-------- 108 (450)
T ss_pred cHHHHHHHHHHhhhcc-hhhcCCCcHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHhCCC--------
Confidence 3555555 33333222 235677888899988 888999986 89999999997664322211
Q ss_pred cCCCCCCCeEEecCCCcchHHHH-HhhhcceeEEEecc---------CCccccCHHHHHHHHhhc----CcEEEEeeCCC
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAILGST 213 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~-~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~~----~~~v~~~~~~~ 213 (369)
.+++| +.++|+....+ +...|+.+.-++++ +.++.+|+++|+++|+++ +.+|.+..++|
T Consensus 109 -----pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N 181 (450)
T TIGR02618 109 -----PGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVN 181 (450)
T ss_pred -----CcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecc
Confidence 13444 77888665555 67778755555333 345899999999999863 34666777777
Q ss_pred Cc-ccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-------CCcccc--cc-CCCCcEEEEcCccCC
Q 017569 214 LT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-------PDLEWD--FR-LPLVKSINVSGHKYG 279 (369)
Q Consensus 214 ~t-G~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-------~~~~~~--~~-~~~~Dsi~~~~hK~l 279 (369)
.. |.+ .++++|.++|+++ |+++|.|+|....-.-|+. +....+ .. ...+|++++|+||-+
T Consensus 182 ~~GG~pvs~~~l~~I~elA~~~------Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~ 255 (450)
T TIGR02618 182 LAGGQPVSMANMREVRELCEAH------GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDC 255 (450)
T ss_pred cCCCeeCCHHHHHHHHHHHHHc------CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCC
Confidence 65 677 6799999999999 9999999997653221121 111101 11 447999999999999
Q ss_pred CCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 280 ~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
++|.| |+++++++++..+.-.....| ++ ..++ |...++...++..+|...-..-+.. +..+.++||.+.|++.
T Consensus 256 ~~~~G-G~l~~~d~~l~~k~r~~~~~~-eG-~~ty---Ggla~r~~~ala~gL~e~~~~~y~~-~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 256 LVNIG-GFLCMNDDEMFQSAKELVVVF-EG-MPSY---GGLAGRDMEAMAIGIREAVDYEYIE-HRVKQVRYLGDKLKAA 328 (450)
T ss_pred CCCCc-eEEEeCCHHHHHHHHHHhhhc-CC-cccc---CchhhhhHHHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHHC
Confidence 99986 788888876654321111223 11 1222 3333333444444555443321111 7777899999999998
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|.
T Consensus 329 Gv 330 (450)
T TIGR02618 329 GV 330 (450)
T ss_pred CC
Confidence 76
No 196
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=1.3e-16 Score=154.04 Aligned_cols=216 Identities=13% Similarity=-0.030 Sum_probs=151.2
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|...+||++ ++++.+ + ..+++++|++|+..++.++..+ +++|+++.+.|+.+..
T Consensus 50 ~p~~~~Le~~----lA~l~~-~-------~~v~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~~~~ 104 (366)
T PRK07582 50 NPTWRALEAA----LGELEG-A-------EALVFPSGMAAITAVLRALLRP-------------GDTVVVPADGYYQVRA 104 (366)
T ss_pred CccHHHHHHH----HHHHcC-C-------CEEEECCHHHHHHHHHHHhcCC-------------CCEEEEeCCCcHhHHH
Confidence 4566777776 666662 2 2677888889998887776432 4789999998877665
Q ss_pred HH----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
.+ ...|++++.++.+++ +. .+.+++++|+++.|+||+|.+.|+++|+++|+++ +++++||+
T Consensus 105 ~~~~~l~~~G~~v~~v~~~~~-~~--------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~------g~~lvVD~ 169 (366)
T PRK07582 105 LAREYLAPLGVTVREAPTAGM-AE--------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAA------GALLVVDN 169 (366)
T ss_pred HHHHHHhcCeEEEEEECCCCh-HH--------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 44 346999999987642 11 3346789999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|.... .. .+.+ .++|.++.+++||+.++.| .|+++.++++.. ..+.....+.+ . ..
T Consensus 170 t~~~~~---~~--~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g----------~--~~ 228 (366)
T PRK07582 170 TTATPL---GQ--RPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAG----------A--IP 228 (366)
T ss_pred CCCCcc---cc--Cchh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhC----------C--CC
Confidence 986321 11 1122 2689999999999988877 487776554332 22211111111 1 11
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCcccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
.++..|..++.+..-..+-.++.++|..++++|++.+.+++-+
T Consensus 229 ~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~ 271 (366)
T PRK07582 229 GPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVR 271 (366)
T ss_pred CHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 3566787777776543332288899999999999999877644
No 197
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.73 E-value=2.2e-16 Score=157.09 Aligned_cols=237 Identities=13% Similarity=0.026 Sum_probs=160.1
Q ss_pred CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 017569 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (369)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s 166 (369)
|....+..+|++++.+++.+.+|....- +...+++|+|+++++.+.+.++.++ ++.|++++|+|..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v-~~~~Iiit~Ga~~al~~l~~~l~~p-------------Gd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF-DPNKLVLTAGATSANETLMFCLAEP-------------GDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc-ChHHeEEccChHHHHHHHHHHhCCC-------------CCEEEECCCCCCc
Confidence 4445578899999999999887743110 1135899999999999888887653 5789999999999
Q ss_pred HHHHHh-hhcceeEEEecc-CCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhcc
Q 017569 167 WEKFAR-YFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEET 235 (369)
Q Consensus 167 ~~~~~~-~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~ 235 (369)
+...+. ..|++++.||++ ++++.+|+++|++++.+ ++++|++++|+||||.+-+ +++|.++|+++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~---- 223 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK---- 223 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC----
Confidence 988777 589999999986 35688999999998865 6889999999999999854 67788889999
Q ss_pred CCCceEEeecccccccccccCCCc-c-ccc-c---------CCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCccccccc
Q 017569 236 GWDTPIHVDAASGGFIAPFLYPDL-E-WDF-R---------LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~---------~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
++|+++|.+|+...+ -.+.. . ... . ..++ .+..+.-|.++ .+...|+++..++... ..+..
T Consensus 224 --~~~iI~DE~Y~~~~f--~~~~~~s~l~~~~~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~ 297 (468)
T PLN02450 224 --NIHLISDEIYSGTVF--DSPGFVSVMEVLKDRKLENTDVSNRV-HIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATK 297 (468)
T ss_pred --CcEEEEEcccccccc--CCCCcccHHHHhhhcccccCCCCCcE-EEEEeccccCCCCCccEEEEEECCHHHH-HHHHH
Confidence 999999999987543 11110 0 000 0 0111 23445788764 7899999987543222 22111
Q ss_pred ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-----HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-----IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 ~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-----~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
...+ +. ...+.+.++...+.... +++. +..+..+.+.+.|++.|.
T Consensus 298 ~~~~-----------~~---~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi 349 (468)
T PLN02450 298 MSSF-----------GL---VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGI 349 (468)
T ss_pred Hhhc-----------CC---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1011 00 01334445555554332 2322 566666677888887764
No 198
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=6.5e-16 Score=149.99 Aligned_cols=255 Identities=11% Similarity=-0.043 Sum_probs=167.0
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|....+. ++++.+.+.+.+.. ....| ..++..+ +++.+++++|+++ ..+++|+|+++++.+++
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~~----lr~~ia~~~~~~~-----~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESRR----LRAALAEDSGLES-----ENILVGCGADELIDLLM 120 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHHH----HHHHHHHHhCcCh-----hhEEEcCCHHHHHHHHH
Confidence 33455554433 34566777665421 11122 2234444 4455788888875 24899999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH-hhcCcEEEEeeCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGST 213 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i-~~~~~~v~~~~~~~ 213 (369)
.++.++ +++|++++|+|..+...++..|++++.+|.+++ +.+|+++|++++ ++++++|++++|+|
T Consensus 121 ~~~~~~-------------gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~P~N 186 (380)
T PLN03026 121 RCVLDP-------------GDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD-FSLDVPRIVEAVETHKPKLLFLTSPNN 186 (380)
T ss_pred HHhcCC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHHhccCCcEEEEeCCCC
Confidence 776442 468999999999898889999999999998754 899999999999 67899999999999
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~ 292 (369)
|||.+.+.+++.++++ . .+++++|++|..+.. . ......+....-..+.-+..|.++ .+.+.|+++...
T Consensus 187 PTG~~~~~~~l~~l~~-~------~~~vi~DeaY~~~~~--~-~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~ 256 (380)
T PLN03026 187 PDGSIISDDDLLKILE-L------PILVVLDEAYIEFST--Q-ESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL 256 (380)
T ss_pred CCCCCCCHHHHHHHHh-c------CCEEEEECcchhhcC--C-cchHHHHHhCCCEEEEecchHhhcCccccceeeecCH
Confidence 9999999999999996 4 589999999976432 1 110011111111244556778875 677889988632
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH-HHH--HhhHHHHHHHHHHHhcCCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI-PSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~-~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+.+ ..+..... .+ + ...+.+.++...+....+ ++. +..+..+++.+.|+++|++
T Consensus 257 -~~i-~~l~~~~~-------~~----~---~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 313 (380)
T PLN03026 257 -SII-EYLWRAKQ-------PY----N---VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFL 313 (380)
T ss_pred -HHH-HHHHHhcC-------CC----C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 222 22111000 01 1 113344444555533333 333 5667777888999888754
No 199
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=1.6e-16 Score=153.43 Aligned_cols=214 Identities=15% Similarity=0.097 Sum_probs=151.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|...+||+. ++++.|.+. .++++||++|+..++ .+.. .+++|+++.+.|..
T Consensus 52 pt~~~le~~----la~l~g~~~-------~~~~~sG~~ai~~~~-~ll~-------------~Gd~Vl~~~~~y~~t~~~ 106 (366)
T PRK08247 52 PTRGVLEQA----IADLEGGDQ-------GFACSSGMAAIQLVM-SLFR-------------SGDELIVSSDLYGGTYRL 106 (366)
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHH-HHhC-------------CCCEEEEecCCcCcHHHH
Confidence 455566655 999999975 688889999987654 3322 14689999988875
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+...+...|++++.++. .|+++++++++++|++|++++|+||+|.+.++++|+++|+++ ++++++|++
T Consensus 107 ~~~~~~~~G~~v~~vd~------~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~------g~~lIvD~t 174 (366)
T PRK08247 107 FEEHWKKWNVRFVYVNT------ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKH------GLLLIVDNT 174 (366)
T ss_pred HHHHhhccCceEEEECC------CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 34455668988888864 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
|+..+. ..| . ..++|.++.|..|+++++.+ .|+++.++++.. ..+.....+.+ . ...
T Consensus 175 ~~~~~~--~~p---~---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~g----------~--~~s 233 (366)
T PRK08247 175 FYTPVL--QRP---L---EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAAG----------A--VLS 233 (366)
T ss_pred Cccccc--cCc---h---hcCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhcC----------C--CCC
Confidence 965332 111 1 13789999999999987654 466665443322 11111001111 0 112
Q ss_pred HHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 325 IIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
...+|..++.+. .+..+ +..++++.+++.|++.+.++.
T Consensus 234 ~~~a~l~~~~l~--tl~~r~~~~~~~a~~l~~~L~~~p~v~~ 273 (366)
T PRK08247 234 PFDSWLLIRGMK--TLALRMRQHEENAKAIAAFLNEQPGVTD 273 (366)
T ss_pred hHHHHHHHhccC--cHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 455677766554 23333 789999999999999876654
No 200
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.72 E-value=3.3e-16 Score=154.57 Aligned_cols=258 Identities=13% Similarity=0.004 Sum_probs=168.5
Q ss_pred cccccccCCCh-HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 59 NLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 59 ~l~~~~~~~~~-~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
+|+.+.|.+.+ |.+.+.+.++.. ....|....+..++++.+.+|+.+.++.+ ..+++|+|+++++.+++.++
T Consensus 89 ~L~~g~p~~~~~p~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~------~~Iiit~G~~~al~~~~~~l 161 (431)
T PRK15481 89 DLAGGNPDPQRLPDLSRYFARLSR-TPRLYGDAPVSPELHAWAARWLRDDCPVA------FEIDLTSGAIDAIERLLCAH 161 (431)
T ss_pred hhhcCCCChhHhHHHHHHHHHhhh-hhhhcCCcCCCHHHHHHHHHHHhhccCCc------CeEEEecCcHHHHHHHHHHh
Confidence 34444443322 445555555432 23334444567788888777766543321 24899999999999998887
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEe-eCCCCcc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI-LGSTLTG 216 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~-~~~~~tG 216 (369)
.++ ++.|++++|+|..+...++..|++++.||++++ .+|+++|++++++++++++++ +|+||||
T Consensus 162 ~~p-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG 226 (431)
T PRK15481 162 LLP-------------GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE--GMQPEKLERALAQGARAVILTPRAHNPTG 226 (431)
T ss_pred CCC-------------CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC--CCCHHHHHHHHhcCCCEEEECCCCCCCCC
Confidence 653 478999999999999999999999999999764 489999999998888888887 9999999
Q ss_pred cCCCHH---HHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 217 EFEDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 217 ~~~~l~---~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
.+.+.+ +|.++|++++ ++|+++|.+|+.+... +... ......+ -.+.-+..|.++....+|+++..+
T Consensus 227 ~~~s~~~~~~l~~la~~~~-----~~~ii~De~Y~~~~~~---~~~~~~~~~~~~-vi~~~SfSK~~~~GlRiG~~i~~~ 297 (431)
T PRK15481 227 CSLSARRAAALRNLLARYP-----QVLVIIDDHFALLSSS---PYHSVIPQTTQR-WALIRSVSKALGPDLRLAFVASDS 297 (431)
T ss_pred ccCCHHHHHHHHHHHHhcC-----CceEEecCchhhhccC---CCCCCCcCCCCC-EEEEeeeccccCCCceeEEEeCCH
Confidence 997765 8889988763 7999999999875431 1101 1111111 134445789887778889887632
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH----HHH--HhhHHHHHHHHHHHhcCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI----PSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~----~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.. ..+.....+. .. +...+.++++...+....+ .+. ...+..+++.+.|++.|+
T Consensus 298 -~~~-~~~~~~~~~~-----~~-------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~ 358 (431)
T PRK15481 298 -ATS-ARLRLRLNSG-----TQ-------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGI 358 (431)
T ss_pred -HHH-HHHHHHHhcc-----cc-------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222 2221100000 00 1124555555555543333 333 566667778888887654
No 201
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.72 E-value=4.9e-16 Score=148.92 Aligned_cols=262 Identities=12% Similarity=0.049 Sum_probs=157.0
Q ss_pred ChHHHHHHHHHHhccCC--CCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~--~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.+|.+.+++...+.+.. +.+ .......++|.-+.+...++||++++. -...+=..+|+.||+.++.++.++
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~--w~anvqp~SGs~An~av~~aLl~p 109 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKE--WYANVQPHSGSQANLAVYMALLKP 109 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTT--EEEE---SSHHHHHHHHHHHHT-T
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCccc--ceEEeecCCchHHHHHHHHHHHhh
Confidence 45677777776654321 111 112346789999999999999999521 011234458999999999888764
Q ss_pred HHHHHHhcCCCCCCCeEEecC---CCcchHHHHHhh-------hcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEe
Q 017569 141 WQQKRKEQGKPYDKPNIVTGA---NVQVCWEKFARY-------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAI 209 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~---~~h~s~~~~~~~-------~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~ 209 (369)
+++|+.-+ -.|.+....... ...++...+++++++.+|.+++++.+.+ +|++|++-
T Consensus 110 -------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G 176 (399)
T PF00464_consen 110 -------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICG 176 (399)
T ss_dssp -------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE
T ss_pred -------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEEC
Confidence 46776543 345543333222 3356777888877799999999998876 78888754
Q ss_pred eCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 210 ~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
..+. -...|++++.++|++. |.++++|+++-.+.+ .....+.. ++.+|.++.++||.+.+|.| |+++
T Consensus 177 ~S~y--~~~~d~~~~reIad~v------ga~l~~D~sH~~GLI--a~g~~~~P--~~~ADvvt~sThKtl~GPrg-giI~ 243 (399)
T PF00464_consen 177 ASSY--PRPIDFKRFREIADEV------GAYLMADISHIAGLI--AGGLFPNP--FPYADVVTGSTHKTLRGPRG-GIIL 243 (399)
T ss_dssp -SST--SS---HHHHHHHHHHT------T-EEEEE-TTTHHHH--HTTSS--G--CCTSSEEEEESSGGG-SSS--EEEE
T ss_pred chhc--cCccCHHHHHHHHHhc------CcEEEecccccccce--ehheecCc--cccceEEEeeccccccccCc-eEEE
Confidence 4433 3456899999999999 999999999765554 22222222 34699999999999999987 7888
Q ss_pred EeCCCCc--------ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 290 WRTKDDL--------PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 290 ~~~~~~~--------~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+++...- ...+....+.. .-+.++++.....++++..+|+......+.+. +..+||+.|++.|.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~I~~a----vfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~ 319 (399)
T PF00464_consen 244 TNKGSKNVDKKGKEIDEELAEKIDSA----VFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER 319 (399)
T ss_dssp ES-SEEEE-TTS-EEEHHHHHHHHHH----HTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCccccCCcccccHHHHHHHhccc----cCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8721100 00110000000 01223455556668888889998766666666 9999999999999998
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
|+
T Consensus 320 G~ 321 (399)
T PF00464_consen 320 GF 321 (399)
T ss_dssp T-
T ss_pred Cc
Confidence 86
No 202
>PRK15029 arginine decarboxylase; Provisional
Probab=99.72 E-value=3e-16 Score=161.09 Aligned_cols=228 Identities=12% Similarity=-0.010 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcc
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~ 176 (369)
-++..+..+++||++.. -.+++|+|.+|..++.++..+ +++|+++.+.|-|+..++.+.|+
T Consensus 207 I~eAq~~aA~~fgA~~t------~FlvNGST~gn~a~i~a~~~~-------------gd~Vlv~RN~HKSv~~al~L~ga 267 (755)
T PRK15029 207 FGESEKYAARVFGADRS------WSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLILTGA 267 (755)
T ss_pred HHHHHHHHHHHhCCCcE------EEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCC
Confidence 34566779999999863 688889999998888877653 57999999999999999999999
Q ss_pred eeEEEeccCCc----cccC-----HHHHHHHHhhcC--c--------EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCC
Q 017569 177 ELKEVKLEEGY----YVMN-----PVKAVELVDENT--I--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 177 ~v~~v~~~~~~----~~~d-----~~~L~~~i~~~~--~--------~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~ 237 (369)
.+++++..-+. +.++ ++.++++|.+.+ + ++++++||.. |.+-|+++|+++|+++
T Consensus 268 ~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~-Gv~~di~~I~~~~h~~------ 340 (755)
T PRK15029 268 KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD-GVCYNAKEAQDLLEKT------ 340 (755)
T ss_pred eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCc-ceeeCHHHHHHHHHhc------
Confidence 99999754211 2344 999999997532 3 8889998655 9999999999999999
Q ss_pred CceEEeecccccccccccCCCcc--ccc-----cCCCCc-EEEEcCccCCCCCCCeEEEEEeCCC-Ccc-cccccccCcc
Q 017569 238 DTPIHVDAASGGFIAPFLYPDLE--WDF-----RLPLVK-SINVSGHKYGLVYAGVGWVVWRTKD-DLP-DELVFHINYL 307 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~--~~~-----~~~~~D-si~~~~hK~l~~p~g~g~l~~~~~~-~~~-~~~~~~~~y~ 307 (369)
+++++||+|+|+... +.|..+ ..+ ...++| .++-|+||.+.+-..++++.+++.. .+. ..+.......
T Consensus 341 ~~~llvDEAhGah~~--F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 341 SDRLHFDEAWYGYAR--FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred CCeEEEECccccccc--cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 999999999998764 344332 122 115788 8889999999998888999987642 121 1221111222
Q ss_pred CCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH-HhhHHHHHHHHHHHhcC
Q 017569 308 GSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 308 ~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~-~~~~~a~~l~~~L~~~g 360 (369)
++ .|.+....+++-.+.+.+.. .|...+ +.++.+..++++|++.+
T Consensus 419 qS--------TSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 419 AT--------TSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred cC--------CCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 21 25555667788888888865 688877 99999999999998764
No 203
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.72 E-value=9.5e-16 Score=148.60 Aligned_cols=185 Identities=12% Similarity=0.078 Sum_probs=135.6
Q ss_pred HHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCC
Q 017569 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (369)
Q Consensus 71 ~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~ 150 (369)
...+++.+.+..+... .. ..+.+++.+++++++|.+. .++++||+.|+.+++.++.-
T Consensus 12 ~~~~~~~~~l~~~~~~-g~----~~~~~~~e~~la~~~g~~~-------~v~~~sgt~al~~~l~~~~~----------- 68 (375)
T PRK11706 12 TELDYIQQAMSSGKLC-GD----GGFTRRCQQWLEQRFGSAK-------VLLTPSCTAALEMAALLLDI----------- 68 (375)
T ss_pred HHHHHHHHHHHcCCcc-CC----CHHHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhCC-----------
Confidence 3456666777654332 11 2344556666888888864 89999999999887765411
Q ss_pred CCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH
Q 017569 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 151 ~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~ 230 (369)
..+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|+++ +++|...++++|.++|++
T Consensus 69 -~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~~ 144 (375)
T PRK11706 69 -QPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAKK 144 (375)
T ss_pred -CCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHHH
Confidence 1247999999999999999999999999999988768999999999999999988865 468999999999999999
Q ss_pred hhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeCCCC
Q 017569 231 KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~~~~ 295 (369)
+ ++++++|+||+.+.. .... ... ...|.-++|.| |.+.++.| |++++.+++.
T Consensus 145 ~------~i~vIeD~a~a~g~~--~~~~---~~g-~~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~ 198 (375)
T PRK11706 145 H------NLFVVEDAAQGVMST--YKGR---ALG-TIGHIGCFSFHETKNYTAGEG-GALLINDPAL 198 (375)
T ss_pred c------CCEEEEECccccccc--cCCe---eee-cCcCEEEEeCCCCccccccCC-eEEEECCHHH
Confidence 9 999999999986542 1111 111 12355556666 99865444 5555655433
No 204
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.71 E-value=2.8e-15 Score=132.50 Aligned_cols=228 Identities=14% Similarity=0.036 Sum_probs=178.1
Q ss_pred HHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEE
Q 017569 101 VNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180 (369)
Q Consensus 101 ~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~ 180 (369)
.+.+++++|+|. .-+|.|+.+|-+.++.+++.+ ++.|++....||+..-++...|+++..
T Consensus 67 ~~dlaeFlg~D~-------~R~t~GARe~KfavMhal~~~-------------gd~vV~D~~aHYttyvAAEragl~v~e 126 (382)
T COG1103 67 LEDLAEFLGMDE-------VRVTAGAREAKFAVMHALCKE-------------GDWVVVDSLAHYTTYVAAERAGLNVAE 126 (382)
T ss_pred HHHHHHHhCCce-------eeecccchhhHHHHHHHhccC-------------CCEEEEcCcchHHHHHHHHhcCCeEEe
Confidence 334999999996 789999999999998888663 578999999999999999999999999
Q ss_pred EeccC-CccccCHHHHHHHHhh-------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 181 VKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
||-.. ..+.++++...+.|++ .+.+.+++++....|.+.|.+.++++|+++ ++++++.+||.-+-+
T Consensus 127 Vp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~------gvPlllN~AYt~Grm 200 (382)
T COG1103 127 VPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY------GVPLLLNCAYTVGRM 200 (382)
T ss_pred cCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHc------CCceEeecceeeccc
Confidence 99643 4599999998888864 267788999999999999999999999999 999999999987766
Q ss_pred cccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHH
Q 017569 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (369)
Q Consensus 253 ~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l 332 (369)
| ....-.++|+++.|+||-+-+...+|++-++.. +....+..+-.+...-. --.+.||-.+..+..+-+++
T Consensus 201 p-------vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KE-vellGCT~rGapivTlmASf 271 (382)
T COG1103 201 P-------VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKE-VELLGCTVRGAPIVTLMASF 271 (382)
T ss_pred c-------ccccccCCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhcccccccce-eeeecccccCchHHHHHhcC
Confidence 3 333355899999999999988888999988643 33222222212111111 11256888787777776666
Q ss_pred HHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCcc
Q 017569 333 IRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 333 ~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~ 364 (369)
-.. .+-+..+ .-.+.|++|...|+++|-|++
T Consensus 272 P~V-~eRVkrWdeEv~kaR~fv~elEkigg~~q 303 (382)
T COG1103 272 PHV-VERVKRWDEEVEKARWFVAELEKIGGVKQ 303 (382)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 655 4556666 889999999999999986554
No 205
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.71 E-value=3.5e-16 Score=155.82 Aligned_cols=215 Identities=13% Similarity=0.046 Sum_probs=145.4
Q ss_pred cccccccCCCh-HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHH-HHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 59 NLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIA-HLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 59 ~l~~~~~~~~~-~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la-~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
+++.+.|..++ +.+.+++..... + +|....+..++.+++.+++. +..+..........+++|+|+++|+.+++.+
T Consensus 104 ~l~~g~p~~~~~~~v~e~~~~~~~-~--~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~a 180 (527)
T PRK09275 104 SYVRDQLGFDADEFVYELVDGIIG-D--NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDS 180 (527)
T ss_pred hhcCCCCCCCCCHHHHHHHHHHhc-C--CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHH
Confidence 55666666544 556775544432 2 36666788999999888554 4333321111123589999999999998886
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec--cC-CccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EE-GYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~--~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+.... .-..+++|+++.|+|..|...+++.|.+++.+++ ++ ++|.+|+++|++++++++++|++++|+|
T Consensus 181 L~~~~--------ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~N 252 (527)
T PRK09275 181 LKENG--------LLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSN 252 (527)
T ss_pred Hhhhh--------cCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcC
Confidence 43210 0012579999999999999999888766555544 43 4589999999999999999999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCC-CCCCCeEEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAGVGWV 288 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l-~~p~g~g~l 288 (369)
|||.+-+ +++|+++|++++. ++||++|.+|+.+...+. ..+. ...--.+..|..|.+ ++++..|++
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~-----s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i 323 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRP----DLMIITDDVYGTFVDDFR-----SLFAVLPYNTILVYSFSKYFGATGWRLGVI 323 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCC----CcEEEECCCChhhccccc-----CHHHhCCCCEEEEeehhhhccCcHhHHhhh
Confidence 9999965 7788888854311 899999999987542111 1111 111112333466776 578999999
Q ss_pred EEeCC
Q 017569 289 VWRTK 293 (369)
Q Consensus 289 ~~~~~ 293 (369)
+..+.
T Consensus 324 ~~~~~ 328 (527)
T PRK09275 324 ALHED 328 (527)
T ss_pred hcCch
Confidence 87543
No 206
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.71 E-value=6.3e-16 Score=150.98 Aligned_cols=215 Identities=13% Similarity=0.026 Sum_probs=150.2
Q ss_pred Ccccccccc---CC-Ch--HHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 57 RLNLASFVT---TW-ME--PECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 57 ~~~l~~~~~---~~-~~--~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
.++|+.+.+ .. .+ +.+.+++.+++... ...|....|..++++++.+|+.+..+...+. +...+++|+|+++|
T Consensus 28 ~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~a 106 (396)
T PRK09257 28 KVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGA 106 (396)
T ss_pred cEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHH
Confidence 366666643 11 12 56778877776542 3356667799999999999987654432111 11124899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHhh---cCcE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE---NTIC 205 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~---~~~~ 205 (369)
+.+++.++..- ..+++|++++|+|+.+..+++..|++++.+|+ +++++.+|+++|++++.. ++++
T Consensus 107 l~~~~~~l~~~-----------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 175 (396)
T PRK09257 107 LRVGADFLKRA-----------FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVV 175 (396)
T ss_pred HHHHHHHHHHh-----------CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEE
Confidence 99988665320 01479999999999999999999999999998 444589999999998863 3566
Q ss_pred EEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc--cccCCCCcEE-EEcCccCC
Q 017569 206 VAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSI-NVSGHKYG 279 (369)
Q Consensus 206 v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~Dsi-~~~~hK~l 279 (369)
+++++++||||.+. .+++|+++|+++ ++++++|.+|..+... ..+.... .+.-..-..+ ..|.-|.+
T Consensus 176 ~i~~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~~~vi~i~SfSK~~ 248 (396)
T PRK09257 176 LLHGCCHNPTGADLTPEQWDELAELLKER------GLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLELLVASSFSKNF 248 (396)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEeccccccccc-hHHHHHHHHHHHhcCCcEEEEEEcCCcC
Confidence 77799999999984 478889999999 9999999999875421 0000000 1110111233 45688988
Q ss_pred CC-CCCeEEEEE
Q 017569 280 LV-YAGVGWVVW 290 (369)
Q Consensus 280 ~~-p~g~g~l~~ 290 (369)
+. ++++|++++
T Consensus 249 ~~~GlRiG~~~~ 260 (396)
T PRK09257 249 GLYGERVGALSV 260 (396)
T ss_pred ccccccceeEEE
Confidence 75 789999974
No 207
>PRK08175 aminotransferase; Validated
Probab=99.71 E-value=4.6e-15 Score=144.82 Aligned_cols=209 Identities=12% Similarity=0.010 Sum_probs=147.6
Q ss_pred CCccccccccCCC-hHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 56 PRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 56 p~~~l~~~~~~~~-~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
..++|+.+.|... ++.+.+.+.+.+.. ....|....+..++++++.+++.+.+|.+.+. ....++|+|+++++.+.
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~i~~t~G~~~~l~~~ 107 (395)
T PRK08175 30 DIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP--ESEAIVTIGSKEGLAHL 107 (395)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHHHH
Confidence 3345555545432 34455555554432 33455556688999999999999887875421 12488999999999887
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEee
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAIL 210 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~ 210 (369)
+.++.++ +++|++++++|..+...++..|++++.+|++++ ..+.++|+++++. ++++|+++.
T Consensus 108 ~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i~~ 172 (395)
T PRK08175 108 MLATLDH-------------GDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG--VDFFNELERAIRESYPKPKMMILGF 172 (395)
T ss_pred HHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCeEEEEecccC--CCcHHHHHHHHhhccCCceEEEEeC
Confidence 7665432 468999999999988888999999999999754 3357888888863 688999999
Q ss_pred CCCCcccCCCH---HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCC---CCcEEEEcCccCCC-CC
Q 017569 211 GSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLP---LVKSINVSGHKYGL-VY 282 (369)
Q Consensus 211 ~~~~tG~~~~l---~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~---~~Dsi~~~~hK~l~-~p 282 (369)
|+||||.+-+. ++|+++|+++ ++++++|.+|+.+.. .......+ ... ....++.+.-|.++ ..
T Consensus 173 p~NPtG~~~~~~~~~~i~~~a~~~------~i~ii~De~y~~l~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pG 243 (395)
T PRK08175 173 PSNPTAQCVELEFFEKVVALAKRY------DVLVVHDLAYADIVY---DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAG 243 (395)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchHhhcc---CCCCCcchhcCCCcccCEEEEeeccccccCcc
Confidence 99999998665 7899999999 999999999986543 11101111 111 12234567889974 44
Q ss_pred CCeEEEEE
Q 017569 283 AGVGWVVW 290 (369)
Q Consensus 283 ~g~g~l~~ 290 (369)
.++|+++.
T Consensus 244 lRiG~~~~ 251 (395)
T PRK08175 244 WRIGFMVG 251 (395)
T ss_pred hhheeeeC
Confidence 67898875
No 208
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.71 E-value=1.8e-15 Score=149.09 Aligned_cols=177 Identities=12% Similarity=-0.041 Sum_probs=129.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
++...+||++ +++++|.+. .+++++||+|+..++.++...+..+. + -..+++||++.++|.++..
T Consensus 62 G~~~~~fe~~----lA~~~g~~~-------~v~~~sGt~al~~aL~al~~~~~~~~---~-~~pGd~VIv~~~t~~a~~~ 126 (438)
T PRK15407 62 GRFNDAFEKK----LAEFLGVRY-------ALLVNSGSSANLLAFSALTSPKLGDR---A-LKPGDEVITVAAGFPTTVN 126 (438)
T ss_pred ChhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHHhhcccccc---C-CCCCCEEEECCCCcHHHHH
Confidence 3445666665 888888864 78999999999999887643210000 0 0124689999999999999
Q ss_pred HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++...|+.++.++++.+++.+|++++++++++++++|++++ +.|.+.++++|.++|+++ ++++++|+|++.
T Consensus 127 ~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~---~~G~p~dl~~I~~la~~~------gi~vIeDaa~a~ 197 (438)
T PRK15407 127 PIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAH---TLGNPFDLAAVKAFCDKH------NLWLIEDNCDAL 197 (438)
T ss_pred HHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC---CCCChhhHHHHHHHHHHC------CCEEEEECccch
Confidence 99999999999999865689999999999999999888765 468888999999999999 999999999987
Q ss_pred ccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
+.. ......-. ...+-.+++...|-+.+..| |+++++++++
T Consensus 198 G~~--~~g~~~G~--~gd~~~fSf~~~k~~~~geG-G~l~t~d~~l 238 (438)
T PRK15407 198 GST--YDGRMTGT--FGDIATLSFYPAHHITMGEG-GAVFTNDPLL 238 (438)
T ss_pred hhh--cCCeeeec--cCceEEEeCCCCCCccccCc-eEEEECCHHH
Confidence 654 11111111 11233444445566665555 8888877644
No 209
>PLN02672 methionine S-methyltransferase
Probab=99.71 E-value=6.9e-16 Score=162.97 Aligned_cols=213 Identities=9% Similarity=0.094 Sum_probs=156.0
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
+++.++|+...+.. +++.+.+++.+++..... +.+..++.+++++|+++.+|++.+. ..++++++|+++++..
T Consensus 696 g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~--~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 696 ESSLIHMDVDESFLPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS--CTEFVYGDTSLALFNK 769 (1082)
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC--CCEEEEeCCHHHHHHH
Confidence 45556676666553 457788888877644321 2234557889999999999998631 1357888888888878
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh-cCcEEEEee
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-NTICVAAIL 210 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-~~~~v~~~~ 210 (369)
++.++.++ ++.|+++.|+|+.+...++..|++++.||+++ +++.+|+++|++++++ +++.|+++.
T Consensus 770 ll~aLl~p-------------GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~n 836 (1082)
T PLN02672 770 LVLCCVQE-------------GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISG 836 (1082)
T ss_pred HHHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEEC
Confidence 87877653 47999999999999999999999999999974 4699999999999976 356889999
Q ss_pred CC-CCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-ccccc-----CCC----CcEEEE-c-
Q 017569 211 GS-TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFR-----LPL----VKSINV-S- 274 (369)
Q Consensus 211 ~~-~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~-----~~~----~Dsi~~-~- 274 (369)
|+ ||||.+ +.+++|.++|+++ +++|++|.+|+...+. .+.. ...+. ... ...+.+ +
T Consensus 837 PnhNPTG~v~S~eeLe~Llela~k~------di~VIsDEaYsdL~Fd--~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 837 PTINPTGLLYSNSEIEEILSVCAKY------GARVIIDTSFSGLEYD--TSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred cCCCCcCccCCHHHHHHHHHHHHHc------CCEEEEeCCCCccccC--CCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 98 999998 4588889999999 9999999999865441 1110 00010 000 123333 3
Q ss_pred CccCCCCCCCeEEEEEeCC
Q 017569 275 GHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 275 ~hK~l~~p~g~g~l~~~~~ 293 (369)
+.||+.+++.+|+++..++
T Consensus 909 SKkf~lpGLRIGylIap~~ 927 (1082)
T PLN02672 909 STELLSGGHEFGFLALNDS 927 (1082)
T ss_pred HHhhccHHHHheeEEeCCH
Confidence 4588888899999987543
No 210
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.71 E-value=1.8e-15 Score=148.33 Aligned_cols=222 Identities=11% Similarity=-0.014 Sum_probs=153.5
Q ss_pred HHHHHHHHHHhhhhcCC-CCccccccccCC-ChHHHHHHHHHHhcc-----CCCCCCCCcchHHHHHHHHHHHHHHhCCC
Q 017569 39 KEAAYQVINDELMLDGN-PRLNLASFVTTW-MEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~-p~~~l~~~~~~~-~~~~v~~~~~~~~~~-----n~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (369)
..++.+.+++....+.. ..++|+.+.+.. +++.+.+.+.++++. ....|...++..+|++++.+++.+..|.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 45565555555444433 335676666654 346678888777654 23455566789999999999988777765
Q ss_pred CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce-----------eEE
Q 017569 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-----------LKE 180 (369)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~-----------v~~ 180 (369)
.+. ..+++|+|+++++.+. ..+.+ .+++|++++|+|..+...++..|.. ++.
T Consensus 97 ~~~---~~I~it~Ga~~al~~l-~~~~~-------------~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 97 ISA---DEIFISDGAKCDTGNI-LDIFG-------------PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred CCh---hhEEECCCHHHHHHHH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeE
Confidence 432 4589999999998764 33322 1478999999999999999999986 888
Q ss_pred EeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccC
Q 017569 181 VKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (369)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (369)
+|+++ +++.+|.+ ++++++|++++|+||||.+.+ +++|+++|+++ ++++++|.+|+.+... .
T Consensus 160 v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~--~ 225 (409)
T PRK07590 160 LPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN------GSLILFDAAYEAFISD--P 225 (409)
T ss_pred eecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc------CeEEEEEccchhhccC--C
Confidence 99874 33555543 257899999999999999954 77788889999 9999999999875431 1
Q ss_pred CCccccccCCCC--cEE-EEcCccCC-CCCCCeEEEEEe
Q 017569 257 PDLEWDFRLPLV--KSI-NVSGHKYG-LVYAGVGWVVWR 291 (369)
Q Consensus 257 ~~~~~~~~~~~~--Dsi-~~~~hK~l-~~p~g~g~l~~~ 291 (369)
.....-...... ..+ ..+..|.+ .....+|+++..
T Consensus 226 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 226 SLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 111111112221 133 34688987 477889999874
No 211
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=8e-16 Score=148.93 Aligned_cols=258 Identities=14% Similarity=-0.000 Sum_probs=165.9
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+...+. .+++.+.+++.+.... ...|....+ .+ +++.+++++|+++ ..+++|+|+++++...+.+
T Consensus 39 i~l~~~~~~~~~~~~~~~al~~~~~~-~~~Y~~~~g-~~----lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 39 AKLGSNENPLGPSPAVRRAFADIAEL-LRLYPDPQG-RA----LREAIAARTGVPA-----DRIILGNGSEDLIAVICRA 107 (371)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCcH-HH----HHHHHHHHhCcCH-----HHEEEcCCHHHHHHHHHHH
Confidence 344444332 3456677777665432 223332223 24 4455778888875 2489999999999888777
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+.++ ++.|+++.++|..+...++..|++++.+|++++ +.+|++++++++++++++|++++|+||||
T Consensus 108 ~~~~-------------gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 173 (371)
T PRK05166 108 VLRP-------------GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD-LGFDLDALCAAVARAPRMLMFSNPSNPVG 173 (371)
T ss_pred hcCC-------------CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHhhhcCCCEEEEeCCCCCCC
Confidence 6432 478999999999999999999999999999864 79999999999988999999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-cc-ccCCCCc-EEEEcCccCCC-CCCCeEEEEEeC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD-FRLPLVK-SINVSGHKYGL-VYAGVGWVVWRT 292 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~-~~~~~~D-si~~~~hK~l~-~p~g~g~l~~~~ 292 (369)
.+.+.+++.++++...+ ++++++|++|+.+.. -.+... .. +....-. .+..+.-|.++ .....|++++.+
T Consensus 174 ~~~~~~~~~~l~~~~~~----~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 174 SWLTADQLARVLDATPP----ETLIVVDEAYAEYAA--GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEECcHHHhcC--CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC
Confidence 99998888888875411 789999999987542 111111 01 1111112 34455788875 778899988755
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
++.. ..+..... .+ +- ..+.+.+++..+...+ +++. ...+..+++.+.|++.|+
T Consensus 248 ~~l~-~~~~~~~~-------~~----~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~ 304 (371)
T PRK05166 248 PELV-GLLDRVRT-------PF----NV---NGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMGY 304 (371)
T ss_pred HHHH-HHHHHhcc-------CC----CC---CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 4332 22211000 00 11 1233334444443233 3433 455566778888887764
No 212
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.71 E-value=8.6e-16 Score=153.58 Aligned_cols=181 Identities=14% Similarity=0.018 Sum_probs=138.0
Q ss_pred CCCCcchHHHHHHHHHHHHHHhC----CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 017569 87 MDEYPVTTELQNRCVNMIAHLFN----TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (369)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~ 162 (369)
|..+.|..+|++++.+++.+.+| +++ ..+++|+|+++|+.+++.++.++ ++.|+++.|
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p-----e~Ivit~Ga~~al~~l~~~l~~p-------------GD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDP-----ERVVMSGGATGANETIMFCLADP-------------GDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh-----hhEEEccchHHHHHHHHHHhCCC-------------CCEEEECCC
Confidence 44456889999999999999888 343 35899999999999998887653 478999999
Q ss_pred CcchHHHHHh-hhcceeEEEeccC-CccccCHHHHHHHHh------hcCcEEEEeeCCCCcccCCC---HHHHHHHHHHh
Q 017569 163 VQVCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVD------ENTICVAAILGSTLTGEFED---VKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~------~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~ 231 (369)
+|..+...+. ..|++++.||++. +++.+|++++++++. .++++|+++.|+||||.+.+ +++|.++|+++
T Consensus 152 ~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~ 231 (496)
T PLN02376 152 YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK 231 (496)
T ss_pred CccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999998777 4799999999964 458999999987643 36788999999999999965 67788899999
Q ss_pred hhccCCCceEEeecccccccccccCCCcccc--c----cCC--CCc--EEEEcCccCCC-CCCCeEEEEEeCC
Q 017569 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWD--F----RLP--LVK--SINVSGHKYGL-VYAGVGWVVWRTK 293 (369)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~--~----~~~--~~D--si~~~~hK~l~-~p~g~g~l~~~~~ 293 (369)
++++++|++|+...+ -.+....- + ... ..+ .+..+..|.++ .+..+|+++..++
T Consensus 232 ------~i~lI~DEiY~~~~f--~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 232 ------NIHLVVDEIYAATVF--AGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred ------CCEEEEEcCcccccc--CCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH
Confidence 999999999997543 11111000 1 000 112 23568999874 6689999987543
No 213
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.71 E-value=3.1e-16 Score=153.50 Aligned_cols=214 Identities=13% Similarity=-0.011 Sum_probs=144.2
Q ss_pred CccccccccC-C-ChH----HHHHHHHHHhc-cCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeE--EeCCch
Q 017569 57 RLNLASFVTT-W-MEP----ECDKLVMASIN-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV--GTVGSS 127 (369)
Q Consensus 57 ~~~l~~~~~~-~-~~~----~v~~~~~~~~~-~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~Ggt 127 (369)
.++|+.+.+. + ++. .+.+++.+.+. .....|....|..++++++.+|+.+..+...+. ..+. .|.|++
T Consensus 31 ~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~---~~v~~~~t~G~~ 107 (404)
T PTZ00376 31 KVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAE---KRIATVQALSGT 107 (404)
T ss_pred cEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccccc---CeEEEeeccCcc
Confidence 3566666541 2 222 23344333333 233556667799999999998886554322111 1244 488999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHh---hcC
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD---ENT 203 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~---~~~ 203 (369)
+|+.+++.+++.-. ..+++|++++|+|+.+...++..|++++.+|+. ++++.+|++.+++++. +++
T Consensus 108 ~al~~~~~~l~~~~----------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~ 177 (404)
T PTZ00376 108 GALRLGFEFLKRFL----------PAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGS 177 (404)
T ss_pred hHHHHHHHHHHHhc----------CCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCC
Confidence 99988776543210 124799999999999999999999999999984 3458999999999985 345
Q ss_pred cEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-c-ccccCCCCcEEE-EcCcc
Q 017569 204 ICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDFRLPLVKSIN-VSGHK 277 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~~~~~Dsi~-~~~hK 277 (369)
++++++.|+||||.+. .+++|+++|+++ ++++++|.+|..+......... . ..+....-..++ .+.-|
T Consensus 178 ~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 251 (404)
T PTZ00376 178 VVLLHACAHNPTGVDPTEEQWKEIADVMKRK------NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSK 251 (404)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 7788899999999984 577888999999 9999999999875431000000 0 111111112344 45788
Q ss_pred CCC-CCCCeEEEE
Q 017569 278 YGL-VYAGVGWVV 289 (369)
Q Consensus 278 ~l~-~p~g~g~l~ 289 (369)
.++ .++..|+++
T Consensus 252 ~~~~~GlRvG~~~ 264 (404)
T PTZ00376 252 NMGLYGERIGALH 264 (404)
T ss_pred cccccccccceEE
Confidence 887 679999985
No 214
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=7.7e-16 Score=148.35 Aligned_cols=200 Identities=16% Similarity=0.086 Sum_probs=138.9
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~a 133 (369)
..++|+...+. ++++.+.+.+.+++... ..|. .+...+++ +.+++++|++++ ..++ ++|+++++..+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~y~-~~~~~~lr----~~ia~~~~~~~~-----~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKI-HRYP-EPDAPELR----EALSKYTGVPVE-----NIIVGGDGMDEVIDTL 103 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhh-cCCC-CCCHHHHH----HHHHHHhCCCHH-----HEEEeCCCHHHHHHHH
Confidence 33455444332 34566777766665432 2222 22334444 457777888752 3667 67878888777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+.++..+ ++.|+++.++|..+...++..|++++.+|.+.+ +.+|+++|++++++++++|++++|+|
T Consensus 104 ~~~~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~~~~p~n 169 (361)
T PRK00950 104 MRTFIDP-------------GDEVIIPTPTFSYYEISAKAHGAKPVYAKREED-FSLDVDSVLNAITEKTKVIFLCTPNN 169 (361)
T ss_pred HHHhcCC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHhccCCCEEEEeCCCC
Confidence 7665331 468999999998888888999999999997653 79999999999988899999999999
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
|||.+.|.++|.++|+++ ++++++|++|+.+.- ........ ...+ .+..+..|.++ .+.+.|+++..
T Consensus 170 ptG~~~~~~~l~~l~~~~------~~~li~De~y~~~~~----~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 170 PTGNLIPEEDIRKILEST------DALVFVDEAYVEFAE----YDYTPLALEYDNL-IIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred CCCCCcCHHHHHHHHHHC------CcEEEEECchhhhCc----cchHHHHHhcCCE-EEEEeehHhhcCchhhcchhcCC
Confidence 999999999999999999 999999999976431 11110111 1111 33346789875 44567888763
No 215
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.70 E-value=1.4e-15 Score=146.94 Aligned_cols=257 Identities=14% Similarity=0.061 Sum_probs=166.5
Q ss_pred Ccccccccc-CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVT-TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~-~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|....+ ..+++.+.+++.+++.. ...|.. +...+++ +.+++++|+++ ..+++|+|+++++...+.
T Consensus 34 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~-~~~~~lr----~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 34 IIKLASNENPLGPSPKAIEAIRAAADE-LHRYPD-GSGFELK----AALAEKFGVDP-----ERIILGNGSDEILELLAR 102 (367)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCC-CcHHHHH----HHHHHHhCcCH-----HHEEEcCCHHHHHHHHHH
Confidence 344444432 23356677877776643 223322 2233444 45777888865 248899999998877766
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++.+. ++.|++++++|..+...++..|++++.+|++ ++.+|++++++++++++++|++++|+|||
T Consensus 103 ~l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~npt 167 (367)
T PRK02731 103 AYLGP-------------GDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAMLAAVTPRTRLVFIANPNNPT 167 (367)
T ss_pred HhcCC-------------CCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHHHHHhCCCCcEEEEeCCCCCC
Confidence 65331 4689999999988888888899999999884 47899999999999889999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC-CccccccCCCCcEE-EEcCccCCC-CCCCeEEEEEeC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DLEWDFRLPLVKSI-NVSGHKYGL-VYAGVGWVVWRT 292 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~Dsi-~~~~hK~l~-~p~g~g~l~~~~ 292 (369)
|.+.+.++|.++++...+ ++++++|++|..+.. ... ..........-+.+ +.+..|.++ .+.++|+++.++
T Consensus 168 G~~~~~~~l~~l~~~~~~----~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 168 GTYLPAEEVERFLAGVPP----DVLVVLDEAYAEYVR--RKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CcCCCHHHHHHHHHhCCC----CcEEEEECcHHHhcc--CcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 999999999999987411 899999999976442 111 00111111112333 335668753 556789998753
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.. +.+... .. .+. . ..+.++++...+..+. +++. +..++.+++.+.|++.|+
T Consensus 242 -~~~-~~l~~~---~~----~~~--~-----~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 297 (367)
T PRK02731 242 -EII-DALNRV---RQ----PFN--V-----NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGL 297 (367)
T ss_pred -HHH-HHHHHc---cC----CCC--C-----CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 222 222110 00 010 1 1345566666664433 3444 667777888888888763
No 216
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.70 E-value=1.9e-15 Score=148.21 Aligned_cols=255 Identities=9% Similarity=-0.035 Sum_probs=157.7
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~n~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.+-..+|.+.+++.++++........ ..+......++.+.+++++|.+. .+++++|++||..++..+...
T Consensus 57 l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~-------~i~~~sG~~a~~~~i~~l~~~ 129 (410)
T PRK13392 57 LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES-------ALLFTSGYVSNDAALSTLGKL 129 (410)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHHhcC
Confidence 34345678888888777543221111 11122223355666999999653 566666788988877755321
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTG 216 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG 216 (369)
..++.|+++...|.++..+++..|++++.++.+ |.+.+++.+. +++++|++++++||+|
T Consensus 130 -----------~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG 192 (410)
T PRK13392 130 -----------LPGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMDG 192 (410)
T ss_pred -----------CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCc
Confidence 013578887788999888888889988776532 3444555443 4788999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
.+.|+++|.++|+++ ++++++|+||+.+.+............ ...+|.++.+.+|+++.+. |+++. +++.
T Consensus 193 ~~~~l~~i~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~ 263 (410)
T PRK13392 193 DIAPIEAICDLADRY------NALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADL 263 (410)
T ss_pred ccccHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHH
Confidence 999999999999999 999999999984433100000000011 2357888888999986543 66654 3322
Q ss_pred cccccc-cccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 296 LPDELV-FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 296 ~~~~~~-~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
. ..+. ....|.. ..+.+.....++.++|+.+...+ ... +..++.+++++.|++.|+
T Consensus 264 ~-~~l~~~~~~~~~--------s~~~~~~~~~a~~aaL~~~~~~~-~~~~~~~~~~~~l~~~L~~~g~ 321 (410)
T PRK13392 264 I-DFVRSFAPGFIF--------TTALPPAVAAGATAAIRHLKTSQ-TERDAHQDRVAALKAKLNANGI 321 (410)
T ss_pred H-HHHHHhCcchhc--------cCcCCHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHcCC
Confidence 2 1111 1111111 11122223445556666654433 233 778889999999998764
No 217
>PRK03321 putative aminotransferase; Provisional
Probab=99.70 E-value=7.6e-16 Score=147.95 Aligned_cols=192 Identities=12% Similarity=0.005 Sum_probs=138.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++.+++.. ...|. .++..+++++ +++++|+++ ..+++|+|+++++..++.+...
T Consensus 36 ~~~~~~~a~~~~~~~-~~~y~-~~g~~~lr~~----ia~~~~~~~-----~~I~~~~G~~~~l~~~~~~~~~-------- 96 (352)
T PRK03321 36 PLPSVRAAIARAAAG-VNRYP-DMGAVELRAA----LAEHLGVPP-----EHVAVGCGSVALCQQLVQATAG-------- 96 (352)
T ss_pred CCHHHHHHHHHHHHh-cCcCC-CCcHHHHHHH----HHHHhCcCH-----HHEEECCCHHHHHHHHHHHhcC--------
Confidence 446778887776643 22232 3466556655 777778765 2488899999888777665533
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l 227 (369)
.++.|+++.+++..+...++..|++++.+|++++ +.+|++++++++++++++|++++|+||||.+.|.++|.++
T Consensus 97 -----~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l 170 (352)
T PRK03321 97 -----PGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD-HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARF 170 (352)
T ss_pred -----CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC-CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHH
Confidence 1468999999988888888899999999998764 7899999999998899999999999999999999999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEEEE-cCccCCC-CCCCeEEEEEe
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINV-SGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi~~-~~hK~l~-~p~g~g~l~~~ 291 (369)
|++.+. ++++++|++|+.+... ......+. ...-+.+++ +..|.++ ...+.|+++..
T Consensus 171 ~~~~~~----~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 231 (352)
T PRK03321 171 LDAVPA----DVLVVLDEAYVEYVRD---DDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH 231 (352)
T ss_pred HHhCCC----CeEEEEechHHHhccC---cCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC
Confidence 987311 8999999999865431 11111111 112234444 5778875 44568898864
No 218
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.70 E-value=6.9e-15 Score=153.35 Aligned_cols=309 Identities=11% Similarity=0.038 Sum_probs=195.6
Q ss_pred ccccccccc-hhHhhhCC-CCCCCCCCCCHHHHHHHHHHhhhhcCCCCcccc-ccccCCChHHHHHHHHH---Hhcc-CC
Q 017569 12 EILSSTFAS-RYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLA-SFVTTWMEPECDKLVMA---SINK-NY 84 (369)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~-~~~~~~~~~~v~~~~~~---~~~~-n~ 84 (369)
++|+++|.. .|-.-++. ...+|+ +.++.++++.+.++-..+...+.-++ ++-+...++.+.+.+.+ .+.. .+
T Consensus 20 ~s~d~l~~~~iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytP 98 (939)
T TIGR00461 20 SDLNALIEQLVPPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTP 98 (939)
T ss_pred CCHHHHhhccCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCC
Confidence 456777766 45322222 245655 46999999999988665543221122 22233445666534432 1222 35
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 017569 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (369)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h 164 (369)
.+++.++|.-+...+.+.++++|.|++. .+..+..++|.+.-.++++.+.. ..++.+|++++..|
T Consensus 99 yQ~EisQG~Le~l~e~Qt~i~eLtGm~~-----aNaSl~d~atA~aEa~~~a~~~~----------~~~~~~vlv~~~~h 163 (939)
T TIGR00461 99 YQPEISQGRLEALLNFQTVVSDLTGLPV-----ANASLLDEGTAAAEAMALSFNVS----------KKKANKFFVAKDLH 163 (939)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHCCCh-----hhhhccchhhHHHHHHHHHHHhh----------cCCCCEEEECCCCC
Confidence 5556677888888899999999999996 23566667776555444444321 01236899999999
Q ss_pred chHHHHH----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 165 VCWEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 165 ~s~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
+.+...+ ...|++++.++. ++|++.+ ++.++++++|++. |.+.|+++|++++|+. +.+
T Consensus 164 P~~~~v~~t~a~~~g~~v~~~~~---------~~l~~~~--~~~~v~~q~Pn~~-G~ied~~~i~~~~h~~------gal 225 (939)
T TIGR00461 164 PQTKSVLHTRAKPFGIEVIVVDC---------SDIKKAV--DVFGCLLQYPATD-GSILDYKQLIDALHSH------KSL 225 (939)
T ss_pred cchHHHHHHHHHhcCcEEEEEcH---------HHHhhcC--CEEEEEEECCCCC-eEEecHHHHHHHHHHc------CCE
Confidence 9876544 467888887743 3466555 5678888888665 9999999999999999 999
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCCC----CCCCeEEEEEeCCC--Cccccccc-ccCccC-----
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL----VYAGVGWVVWRTKD--DLPDELVF-HINYLG----- 308 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~----~p~g~g~l~~~~~~--~~~~~~~~-~~~y~~----- 308 (369)
+++++-...... +.+ +- ..|+|.++-++|+|+. ++++.|++.+|++- .++..+.. ..+-.+
T Consensus 226 ~~~~ad~~al~l--l~~--Pg---e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~ 298 (939)
T TIGR00461 226 VSVAADLMALTL--LTP--PG---HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALR 298 (939)
T ss_pred EEEEechHHhCC--cCC--HH---HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccce
Confidence 999654333222 111 22 2389999777788853 34558999998641 11111110 001111
Q ss_pred ----CCCCCc------cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 309 ----SDQPTF------TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 309 ----~~~~~~------~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
...+.. .--||-.+..++...+++.++|.+|++++ +++.+|+||++.|.+.|+
T Consensus 299 l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~ 363 (939)
T TIGR00461 299 LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPH 363 (939)
T ss_pred eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 000000 01155555556666777899999999998 899999999999999883
No 219
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=1.9e-15 Score=148.66 Aligned_cols=194 Identities=16% Similarity=0.121 Sum_probs=136.2
Q ss_pred CChHHHHHHHHHHhccCC-C--CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY-V--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
+.++.+.+++.+++.... . +........ ....+.+.+++++|++. .+++++|+.|+.+++.++ .
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~-r~~~le~~lA~l~gae~-------alvv~sg~aAi~l~l~~l-~---- 158 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGS-RYSHVEGLLCELTGAED-------ALVVNNNAAAVLLALNTL-A---- 158 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccch-HHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHh-C----
Confidence 446778888887775421 1 111111122 23456677999999975 567888899988777543 1
Q ss_pred HHHhcCCCCCCCeEEecCCCcc------hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc--
Q 017569 144 KRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-- 215 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-- 215 (369)
.+++||++...|. ++...++..|+.+++++.+. ..|+++++++|+++|++|++.+++|++
T Consensus 159 ---------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~---~~~l~dle~aI~~~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 159 ---------KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN---RTHLKDYEDAITENTALLLKVHTSNYRIV 226 (454)
T ss_pred ---------CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---CCCHHHHHHhcCcCCEEEEEEccCccccc
Confidence 1468999987653 23445677799998887642 458999999999999999999999984
Q ss_pred c--cCCCHHHHHHHHHHhhhccCCCceEEeecccccccc--cccCCCccc--cccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLEW--DFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 216 G--~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~~--~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
| .+.|+++|+++|+++ ++++++|++.|...- +|-.+..+. +....++|.+++|+|||+++|. .|+++
T Consensus 227 G~~~~~dl~~I~~la~~~------g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~ 299 (454)
T TIGR00474 227 GFTEEVSIAELVALGREH------GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIV 299 (454)
T ss_pred CCCCCCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEE
Confidence 5 478999999999999 999999987553210 010011111 2224589999999999998885 68888
Q ss_pred EeC
Q 017569 290 WRT 292 (369)
Q Consensus 290 ~~~ 292 (369)
.++
T Consensus 300 g~~ 302 (454)
T TIGR00474 300 GKK 302 (454)
T ss_pred ECH
Confidence 765
No 220
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=2.7e-15 Score=145.42 Aligned_cols=197 Identities=14% Similarity=0.045 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHHhccC--CCCCCCCcchHHHHHHHHHHHHHHhC--CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKN--YVDMDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n--~~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (369)
++++.+.+.+.++++.+ ...| ..++..+|++++.+|+.+.+| .+.+ ...+++|+|+++++..++.+....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~---~~~I~it~Ga~~al~~~~~~~~~~-- 114 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQIT---PANISVGNGSDELIRSLLIATCLG-- 114 (374)
T ss_pred CCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCC---HHHEEEcCChHHHHHHHHHHHcCC--
Confidence 34577888888776653 2334 235788899998888876653 2221 135899999999998777665432
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCcccC
Q 017569 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEF 218 (369)
Q Consensus 143 ~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~ 218 (369)
| ++.|+++.|+|..+...++..|++++.++++++++.+|+++|++++++ ++++|+++.|+||||.+
T Consensus 115 ------g----~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~ 184 (374)
T PRK02610 115 ------G----EGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNP 184 (374)
T ss_pred ------C----CCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCC
Confidence 1 237999999999999999999999999998765689999999999874 78999999999999999
Q ss_pred CCHHHHHHHHHH-hhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCC-CCCCCeEEEEE
Q 017569 219 EDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAGVGWVVW 290 (369)
Q Consensus 219 ~~l~~I~~l~~~-~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l-~~p~g~g~l~~ 290 (369)
.+.+++.++++- + ++|+++|.+|..+.. .+. ...+. ..++ .+.-|.-|.+ ..+..+|+++.
T Consensus 185 ~s~~~l~~l~~~~~------~~~iI~De~Y~~~~~---~~~-~~~~~~~~~~-ivi~SfSK~~g~~GlRiG~~v~ 248 (374)
T PRK02610 185 LTAAELEWLRSLPE------DILVVIDEAYFEFSQ---TTL-VGELAQHPNW-VILRTFSKAFRLAAHRVGYAIG 248 (374)
T ss_pred CCHHHHHHHHhccC------CcEEEEeccccccCc---cch-HHHHhcCCCE-EEEEecchhccCcccceeeeec
Confidence 888777776642 3 899999999986432 110 01111 1111 2345678988 67789999986
No 221
>PRK05839 hypothetical protein; Provisional
Probab=99.69 E-value=1.1e-14 Score=141.14 Aligned_cols=211 Identities=11% Similarity=-0.003 Sum_probs=148.9
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
+++.++|..+.+.. +++.+.+++.+..+. ...|....+..++++++++++++.+|.+.+ ...+++|+|+++++..
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~---~~~I~it~G~~~al~~ 98 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK---ENELIPTFGTREVLFN 98 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHH
Confidence 45666666666553 346677777665532 334444457789999999999999886532 2358999999999987
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++... ..++.|+++.|+|..+...++..|++++.+|+++ +++.+|+.+.+ + +++++|+++.|
T Consensus 99 ~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP 164 (374)
T PRK05839 99 FPQFVLFD-----------KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP 164 (374)
T ss_pred HHHHHhcC-----------CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence 77765320 1246899999999999999999999999999974 44777765442 2 46899999999
Q ss_pred CCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cc-------cCCCCcEEEEcCccC-C
Q 017569 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DF-------RLPLVKSINVSGHKY-G 279 (369)
Q Consensus 212 ~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~-------~~~~~Dsi~~~~hK~-l 279 (369)
+||||.+- .+++|+++|+++ ++++++|.+|+.+.. -.+.... .. ...++ .+..+.-|. +
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~------~~~ii~DE~Y~~~~~--~~~~~s~~~~~~~~~~~~~~~v-i~~~SfSK~~~ 235 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKH------DFILINDECYSEIYE--NTPPPSLLEASILVGNESFKNV-LVINSISKRSS 235 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHc------CCEEEeccchhhccc--CCCCCCHhhhhcccCccccCcE-EEEeccccccC
Confidence 99999984 477788888899 999999999987432 0111010 00 00121 333457785 6
Q ss_pred CCCCCeEEEEEe
Q 017569 280 LVYAGVGWVVWR 291 (369)
Q Consensus 280 ~~p~g~g~l~~~ 291 (369)
.....+|+++..
T Consensus 236 ~~GlRiG~ii~~ 247 (374)
T PRK05839 236 APGLRSGFIAGD 247 (374)
T ss_pred CccceeEEEecC
Confidence 788999999863
No 222
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.69 E-value=8.4e-16 Score=152.94 Aligned_cols=215 Identities=12% Similarity=0.016 Sum_probs=140.6
Q ss_pred cccccccCCChHH-HHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 59 NLASFVTTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 59 ~l~~~~~~~~~~~-v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
+++.+.|..+++. +.+++...+..+ ++....+....|+.+.+++.+.++..........+++|+|+++|+.+++.++
T Consensus 98 ~l~~g~p~~~~~~~~~~~~~~~~~~~--Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l 175 (521)
T TIGR03801 98 SYVIDQLGFDPDAFLYEMCDGIIGDN--YPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSL 175 (521)
T ss_pred hhcCCCCCCCCCHHHHHHHHHhhcCC--CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHH
Confidence 4555555544444 444444444332 2223334445555555677776554321111235899999999999988774
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh--cceeEEEeccC-Cc-----cccCHHHHHHHHhhcCcEEEEe
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF--EVELKEVKLEE-GY-----YVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~--G~~v~~v~~~~-~~-----~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
.... .-..+++|+++.|+|..+...+++. |+.++.|++++ +. |.+|+++|++++++++++|+++
T Consensus 176 ~~~~--------ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~ 247 (521)
T TIGR03801 176 KANE--------LLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVV 247 (521)
T ss_pred hHhh--------cCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEe
Confidence 2210 0012579999999999999988876 56666777653 22 8899999999998899999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCC-CCCCC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAG 284 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l-~~p~g 284 (369)
+|+||||.+.+ +++|+++|++++. +++|++|.+|+.+...+.. .+. ...--.+..|..|.+ ++++.
T Consensus 248 nP~NPTG~vls~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~s-----l~~~~~~~vI~v~SfSK~fg~~G~R 318 (521)
T TIGR03801 248 NPSNPPSVAMSDESIEKIVDIVANDRP----DLMILTDDVYGTFVDDFRS-----LFAELPYNTIGVYSFSKYFGATGWR 318 (521)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCC----CeEEEECCCchhhcccccc-----hhhhCCCCEEEEEcchhhccCchhh
Confidence 99999999965 7778888887421 8999999999865421111 111 111113344577875 57899
Q ss_pred eEEEEEeC
Q 017569 285 VGWVVWRT 292 (369)
Q Consensus 285 ~g~l~~~~ 292 (369)
.|+++..+
T Consensus 319 lG~i~~~~ 326 (521)
T TIGR03801 319 LGTIALHK 326 (521)
T ss_pred hhhhhcCc
Confidence 99998754
No 223
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.69 E-value=8.7e-16 Score=141.92 Aligned_cols=246 Identities=15% Similarity=0.093 Sum_probs=153.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
.+.|++.+++.++-......|+..+.+.++|+ ++++++|... +.|+++||+||.+++.+...+
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~----~~ae~~g~~a-------~~Fv~sGT~aN~lal~~~~~~------ 73 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGEDPTTNALEQ----RIAELFGKEA-------ALFVPSGTQANQLALAAHCQP------ 73 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCCCHHHHHHHH----HHHHHhCCce-------EEEecCccHHHHHHHHHhcCC------
Confidence 34577777776553222333445555555554 4899999943 899999999999999998753
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHH--hhhcceeEEEec-cCCccccCHHHHHHHHhhc-------CcEEEEeeCCCCcc
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFA--RYFEVELKEVKL-EEGYYVMNPVKAVELVDEN-------TICVAAILGSTLTG 216 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~--~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~-------~~~v~~~~~~~~tG 216 (369)
+..||+...+|....++. ..++-.. .+++ +..++.+++++|+.+|.++ +.+++.+.. |..|
T Consensus 74 -------~~~vi~~~~aHi~~~E~Ga~~~~~~~~-~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~-te~G 144 (342)
T COG2008 74 -------GESVICHETAHIYTDECGAPEFFGGGQ-KLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA-TEGG 144 (342)
T ss_pred -------CCeEEEeccccceecccCcHHHHcCCc-eeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc-CCCc
Confidence 358999999998765532 3444222 3333 3346999999999988742 344544444 4779
Q ss_pred cC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 217 ~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
++ +.+++|.++||++ ++.||+|||=-+..+..+.+.. .++ ..++|++++++-|.++.|.+ .+++.++
T Consensus 145 tVy~l~el~~i~~~~k~~------~l~LHmDGAR~~nA~valg~~~-~~~-~~~~D~v~~~~tK~g~~~~g--Aiv~gn~ 214 (342)
T COG2008 145 TVYPLDELEAISAVCKEH------GLPLHMDGARLANALVALGVAL-KTI-KSYVDSVSFCLTKGGGAPVG--AIVFGNR 214 (342)
T ss_pred eecCHHHHHHHHHHHHHh------CCceeechHHHHHHHHHcCCCH-HHH-HhhCCEEEEecccCCcceee--eEEEcCH
Confidence 88 4577888999999 9999999984333332233211 111 45899999999999987765 3555555
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++..+ ..|....... +-|.+....++|.. +|...-.... +..+||++|++.+++.
T Consensus 215 ~~~~~-----a~~~rK~~Gg----l~~k~r~laA~~~~--~l~~~~~~~~~~Han~mA~~La~~~~~~ 271 (342)
T COG2008 215 DFAKR-----ARRWRKRAGG----LMRKARFLAAQGLY--ALEDDVWRLAADHANAMAARLAEGLEAK 271 (342)
T ss_pred HHHHH-----HHHHHHHhcc----cHhhhhHHHHHHHH--HHhccHHHHHHHHHHHHHHHHHHhhhhc
Confidence 44322 2222110001 12223333444432 2322222323 6667799999999954
No 224
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=9.9e-16 Score=147.97 Aligned_cols=215 Identities=17% Similarity=0.099 Sum_probs=151.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC----cc
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV----QV 165 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~----h~ 165 (369)
.|...+||+. ++++.|.+. .+.+++|+.|+.+++.++..+ +++|+++... +.
T Consensus 63 ~P~~~~lE~~----la~leg~~~-------av~~sSG~aAi~~al~all~~-------------GD~Vl~~~~~yg~t~~ 118 (384)
T PRK06434 63 NPTVQAFEEK----YAVLENAEH-------ALSFSSGMGAITSAILSLIKK-------------GKRILSISDLYGQTFY 118 (384)
T ss_pred ChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHHH
Confidence 4667777777 888889875 788999999999998876432 4788887753 33
Q ss_pred hHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 166 CWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
.+...+..+|++++++++++ +++.+|+ +++++|++.+++||++.+.|+++|+++|+++ + ++||
T Consensus 119 ~~~~~~~~~Gi~v~fvd~~~~~~~~l~~--------~~tklv~~e~~snpt~~v~Di~~I~~la~~~------~--lvVD 182 (384)
T PRK06434 119 FFNKVLKTLGIHVDYIDTDRLNSLDFDP--------SNYDLIYAESITNPTLKVPDIKNVSSFCHEN------D--VIVD 182 (384)
T ss_pred HHHHHHHhcCcEEEEECCCChhheeecC--------CCeeEEEEEcCCCCCceeecHHHHHHHHHHc------C--eEEE
Confidence 44466778899999999874 3333221 3689999999999999999999999999999 8 4679
Q ss_pred cccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcch
Q 017569 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~ 322 (369)
++++.... .. +.+ .++|.++.|+||++.++.+ .|+++.++++.. ..+.. ... .. |..
T Consensus 183 ~t~~s~~~---~~--pl~---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~-~~~~~----~~~---~~---G~~-- 241 (384)
T PRK06434 183 ATFASPYN---QN--PLD---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIF-NNLVE----RRK---TL---GSN-- 241 (384)
T ss_pred CCCCCccc---CC--chh---cCCCEEEeecccccCCCCCceEEEEecCcHHHH-HHHHH----HHH---hc---CCC--
Confidence 99864322 11 122 3799999999999988775 577766554322 11110 000 00 111
Q ss_pred hHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccccc
Q 017569 323 SQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 323 ~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...+.+|..++.+.. +..+ +..++|+.++++|++++.+++-+|
T Consensus 242 ~~~~~A~l~~~gL~t--L~~R~~r~~~~a~~~a~~L~~~p~v~~V~y 286 (384)
T PRK06434 242 PDPIQAYLALRGLKT--LGLRMEKHNKNGMELARFLRDSKKISNVYY 286 (384)
T ss_pred CCHHHHHHHHhCCCc--HHHHHHHHHHHHHHHHHHHHcCCCccEEEC
Confidence 124666666665544 4434 999999999999999999887554
No 225
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.68 E-value=4.4e-15 Score=143.92 Aligned_cols=233 Identities=13% Similarity=0.084 Sum_probs=154.7
Q ss_pred CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 017569 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (369)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s 166 (369)
|..++...+||++ +++++|.+. .+.|++||.|+.+++..... .+++| +..+|..
T Consensus 74 Yagd~s~~~LE~~----vAe~lG~e~-------aV~v~sGTaAl~ll~~l~v~-------------pGd~V--p~n~~f~ 127 (460)
T PRK13237 74 YAGSRNFYHLEET----VQEYYGFKH-------VVPTHQGRGAENLLSRIAIK-------------PGQYV--PGNMYFT 127 (460)
T ss_pred hcCCCcHHHHHHH----HHHHHCCCe-------EEEeCCHHHHHHHHHHhCCC-------------CcCEE--CCccchH
Confidence 4667888899988 888999986 89999999999875332211 12343 7777776
Q ss_pred HHHH-HhhhcceeEEEecc-----------CCccccCHHHHHHHHhhc----CcEEEEeeCCCCc-ccC---CCHHHHHH
Q 017569 167 WEKF-ARYFEVELKEVKLE-----------EGYYVMNPVKAVELVDEN----TICVAAILGSTLT-GEF---EDVKLLHD 226 (369)
Q Consensus 167 ~~~~-~~~~G~~v~~v~~~-----------~~~~~~d~~~L~~~i~~~----~~~v~~~~~~~~t-G~~---~~l~~I~~ 226 (369)
...+ +...|+. .+++. +.++.+|+++|+++|+++ +.+|.+..++|.. |.+ .++++|.+
T Consensus 128 Tt~ahI~~~Ga~--fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~e 205 (460)
T PRK13237 128 TTRYHQELNGGI--FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRE 205 (460)
T ss_pred hhHHHHHhCCcE--EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHH
Confidence 6555 6666764 44442 446899999999999864 3456667777877 444 57999999
Q ss_pred HHHHhhhccCCCceEEeecccccccccccC---CCc-cccc-----c-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLY---PDL-EWDF-----R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 227 l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~-~~~~-----~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
+|+++ |+++|.|+|...+..-|+. +.. ...+ . ...+|.+++|+||-+.+|.| |+++++++++.
T Consensus 206 lA~~~------Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~ 278 (460)
T PRK13237 206 LCDKH------GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELF 278 (460)
T ss_pred HHHHc------CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHH
Confidence 99999 9999999997654221221 000 0010 0 24689999999999998875 78888887655
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
...-..-..|.+- .++ |..+++...++...|...-.+ .-+ +.+++++||.++|.+.|.
T Consensus 279 ~~~r~~~~~~eG~--~ty---gg~~grd~~alAvgl~E~~~~--~y~~~ri~~~~~l~~~L~~~Gv 337 (460)
T PRK13237 279 DEAKELVVVYEGM--PSY---GGMAGRDMEAMAIGIEESVQY--EYIEHRVGQVRYLGEKLLAAGV 337 (460)
T ss_pred HHHHHhccccCCC--cCC---CChhhhHHHHHHhHHHhhchH--HHHHHHHHHHHHHHHHHHHCCC
Confidence 3321111233221 121 333344455555555554443 223 788899999999999875
No 226
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.68 E-value=6.8e-15 Score=136.48 Aligned_cols=255 Identities=12% Similarity=0.069 Sum_probs=178.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...+.|. -...++-+++..|.++-.+.+.. ..+..++.|-.-++.+++.++.++
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~---~e~i~~~p~VVpgi~~~I~~~T~~------- 106 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIK---PEWIVFVPGVVPGISLAIRALTKP------- 106 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCC---cceEEEcCcchHhHHHHHHHhCcC-------
Confidence 358899999999988766654 34566888999999999999863 356888899888888888887553
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC--CccccCHHHHHHHHhh-cCcEEEEeeCCCCcccC---CCH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDE-NTICVAAILGSTLTGEF---EDV 221 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~---~~l 221 (369)
++.|++..|.|+.+.++.+..|-++...|+-+ ..+.||.++||+++.+ +++++++|+|+||+|.+ +.+
T Consensus 107 ------gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 107 ------GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred ------CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHH
Confidence 57899999999999999999999999999853 3578899999999876 46999999999999998 789
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCC-CCcEEEE-cCccCCCC-CCCeEEEEEeCCCCcc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLP-LVKSINV-SGHKYGLV-YAGVGWVVWRTKDDLP 297 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~-~~Dsi~~-~~hK~l~~-p~g~g~l~~~~~~~~~ 297 (369)
.+|+++|++| |+.+++|+.+...++.-- ...++ .+... .-.++++ ++.|.++. +-.++.+++.++++..
T Consensus 181 ~~i~elc~kh------~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 181 RKIAELCLRH------GVRVISDEIHADLVLGGH-KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred HHHHHHHHHc------CCEEEeecccccccccCC-CccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 9999999999 999999999987655210 10011 11111 1123443 45676544 4567888887765432
Q ss_pred cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.+.......+. + +..++++-+....+ |.+=+.++ ...+|-.|+++.|++.
T Consensus 254 -~~~~~l~~~~~--------~---~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~ 307 (388)
T COG1168 254 -KFLKRLKRNGL--------H---GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH 307 (388)
T ss_pred -HHHHHHHHhcC--------C---CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 21111111111 1 11233333333333 55555666 6778888888888763
No 227
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.68 E-value=2.6e-15 Score=148.44 Aligned_cols=182 Identities=13% Similarity=0.053 Sum_probs=135.6
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 017569 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (369)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~ 168 (369)
...|...|++++.+++.+.+|..... +...+++|+|+++|+.+.+.++.++ ++.|+++.|+|..+.
T Consensus 93 ~~~G~~~LR~aiA~~l~~~~~~~~~v-~p~~Ivit~G~t~al~~l~~~l~~p-------------GD~Vlv~~P~Y~~f~ 158 (447)
T PLN02607 93 DYHGLKSFRQAMASFMEQIRGGKARF-DPDRIVLTAGATAANELLTFILADP-------------GDALLVPTPYYPGFD 158 (447)
T ss_pred CCcchHHHHHHHHHHHHHhcCCCCCc-CHHHeEEcCChHHHHHHHHHHhCCC-------------CCEEEEcCCCCcchH
Confidence 34588999999999999887732110 1135889999999998888876542 478999999999988
Q ss_pred HHHh-hhcceeEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCC
Q 017569 169 KFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGW 237 (369)
Q Consensus 169 ~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~ 237 (369)
..+. ..|++++.|++++ +++.+|++++++++++ ++++|++++|+||||.+-+ +++|.++|+++
T Consensus 159 ~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~------ 232 (447)
T PLN02607 159 RDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK------ 232 (447)
T ss_pred HHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------
Confidence 7776 4789999998874 4578999999999875 6789999999999999855 78889999999
Q ss_pred CceEEeecccccccccccCCCc-cc-c----c---c-CCCCcEEEEcCccCCC-CCCCeEEEEEeCC
Q 017569 238 DTPIHVDAASGGFIAPFLYPDL-EW-D----F---R-LPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~-~~-~----~---~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~ 293 (369)
++++++|++|....+ -.+.. .. . . . ...+ .+..+.-|-++ .+...|+++..++
T Consensus 233 ~i~lI~DEiYa~~~f--~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~ 296 (447)
T PLN02607 233 NIHLVSDEIYSGSVF--SASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYND 296 (447)
T ss_pred CCEEEEecccccccc--CCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCH
Confidence 999999999987543 11110 00 0 0 0 1122 23456778764 6788999987543
No 228
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.68 E-value=4.3e-15 Score=143.80 Aligned_cols=224 Identities=11% Similarity=-0.057 Sum_probs=143.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~ 171 (369)
+..++.+++++.+++++|.+. .++.++|..||...+..+.. .++.|++....|.++..++
T Consensus 53 g~~~~~~~~e~~la~~~~~~~-------~l~~~sG~~a~~~~~~~~~~-------------~~d~ii~d~~~H~sv~~~~ 112 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAPE-------AFIVPSGYMANLGLCAHLSS-------------VTDYVLWDEQVHISVVYSL 112 (370)
T ss_pred CChHHHHHHHHHHHHHhCCCe-------EEEECChHHHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHH
Confidence 356667788888999999974 45555666777432222211 1357777799999999888
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
+...... ++.. ..|+++|++++++ ++++|+++++++++|.+.|+++|+++|+++ ++++|+|+
T Consensus 113 ~~~~~~~--~~~~----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~------~~~livDe 180 (370)
T PRK05937 113 SVISGWH--QSFR----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY------HAHLIVDE 180 (370)
T ss_pred HHcCCce--EEec----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 8764322 2221 3588999998873 356777899999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchhH
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
||+.+.++.........+.....+.+..+.+|.+ +|.|.|+++.++ .. ..+.. ..+|.. .++-+...
T Consensus 181 a~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~--~~-~~~~~~~~~~~~--------s~~~~~~~ 248 (370)
T PRK05937 181 AHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSSE--VK-QDLMLNSPPLRY--------STGLPPHL 248 (370)
T ss_pred CccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCHH--HH-HHHHHhCCCCee--------cCCCCHHH
Confidence 9986654311100001111122234455677987 678877765432 11 11110 111211 12222334
Q ss_pred HHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhc
Q 017569 325 IIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~ 359 (369)
++++..++..+..+|-... +..++.+++.+.|...
T Consensus 249 ~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~ 284 (370)
T PRK05937 249 LISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA 284 (370)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC
Confidence 5666788888766664444 8889999999988653
No 229
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.68 E-value=5.4e-15 Score=142.27 Aligned_cols=241 Identities=16% Similarity=0.109 Sum_probs=159.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++.+.+.. ...|. .++..+++++ +++++++++ ..+++|+|+++++..++.++ .
T Consensus 33 ~p~~~~~a~~~~~~~-~~~Y~-~~~~~~lr~~----ia~~~~~~~-----~~i~it~Ga~~~l~~~~~~~-~-------- 92 (354)
T PRK06358 33 VPESLKQAITENLDK-LVEYP-DPDYLELRKR----IASFEQLDL-----ENVILGNGATELIFNIVKVT-K-------- 92 (354)
T ss_pred CCHHHHHHHHHHHHh-hhcCC-CccHHHHHHH----HHHHhCCCh-----hhEEECCCHHHHHHHHHHHh-C--------
Confidence 356777777776543 22232 2344555555 666667775 34899999999998877764 2
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~ 223 (369)
++.|+++.|+|..+...++..|++++.++++. +++.+| +++++.+.+++++|+++.|+||||.+.+ +++
T Consensus 93 ------~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 93 ------PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred ------CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHH
Confidence 24789999999999999999999999999874 347899 7777777778999999999999999965 888
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCcc-c-ccc-CCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccc
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-W-DFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~ 299 (369)
|.++|+++ ++++++|++|..+... ..... . ... ..++ .+.-|.-|.++ ...++|++++.++... ..
T Consensus 166 l~~~a~~~------~~~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RiG~lv~~~~~~~-~~ 235 (354)
T PRK06358 166 ILDKCEKR------NIYLIIDEAFMDFLEE--NETISMINYLENFKNL-IIIRAFTKFFAIPGLRLGYGLTSNKNLA-EK 235 (354)
T ss_pred HHHHHHhc------CCEEEEeCcccccCCC--ccchhHHHhccCCCCE-EEEEechhhccCcchhheeeecCCHHHH-HH
Confidence 88899999 9999999999865431 11000 0 011 1121 23345778876 7889999987543222 12
Q ss_pred cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH-HHH--HhhHHHHHHHHHHHhc
Q 017569 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI-PSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 300 ~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~-~~~--~~~~~a~~l~~~L~~~ 359 (369)
+..- . .. ++ ...+.++++...+....+ .+. ...+..+++.+.|++.
T Consensus 236 ~~~~----~---~~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 284 (354)
T PRK06358 236 LLQM----R---EP----WS---INTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF 284 (354)
T ss_pred HHHh----C---CC----Cc---chHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1110 0 01 11 124455555555543333 443 5567777888888776
No 230
>PRK10534 L-threonine aldolase; Provisional
Probab=99.67 E-value=1.1e-15 Score=145.73 Aligned_cols=244 Identities=12% Similarity=0.018 Sum_probs=147.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
++|.+.+++.++.. +...|...+...+||++ +++++|.+. .++++||++++..++.+...+
T Consensus 12 p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~----la~~~g~~~-------~~v~~~g~~a~~~~l~~~~~~------- 72 (333)
T PRK10534 12 PSRAMLEAMMAAPV-GDDVYGDDPTVNALQDY----AAELSGKEA-------ALFLPTGTQANLVALLSHCER------- 72 (333)
T ss_pred CCHHHHHHHHhccC-CCcccCCCHHHHHHHHH----HHHHhCCCe-------EEEeCchHHHHHHHHHHhcCC-------
Confidence 55777777766443 33344456677777777 788889875 689999999998888875431
Q ss_pred cCCCCCCCeEEecCCCcch-HHHH-Hhhhc-ceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccC
Q 017569 148 QGKPYDKPNIVTGANVQVC-WEKF-ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s-~~~~-~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (369)
+++|+++.++|.. +... +...| +.++.+++++ ++.+|+++|++++++ ++++|++++|+ +|.+
T Consensus 73 ------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v 143 (333)
T PRK10534 73 ------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKV 143 (333)
T ss_pred ------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCee
Confidence 3678888888854 3322 34444 6777777765 489999999999976 57888888554 5998
Q ss_pred CCHH---HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 219 EDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 219 ~~l~---~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
.|.+ +|.++|+++ ++++++|+||............ ..+ ....|.++++++|.++.+ .|+.++.+++.
T Consensus 144 ~~~~~l~~i~~~~~~~------~~~lvvDEA~~~~~~~~~~~~~-~~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~ 213 (333)
T PRK10534 144 LPREYLKQAWEFTRER------NLALHVDGARIFNAVVAYGCEL-KEI-TQYCDSFTICLSKGLGTP--VGSLLVGNRDY 213 (333)
T ss_pred cCHHHHHHHHHHHHHc------CCeEEeeHHHHHHHHHHcCCCH-HHH-HhcCCEEEEEeEcCCCCc--ccceEEcCHHH
Confidence 6655 556788888 9999999997632110001111 111 123466777899987655 45433444443
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
. ..+..-....+. .-+ ...+.+.+++..+.. ..+.+ +..+..+++.++|++.|+
T Consensus 214 i-~~~~~~~~~~~~---------~~~-~~~~~~a~~~~~l~~-~~~~~~~~~~~r~~l~~~L~~~g~ 268 (333)
T PRK10534 214 I-KRARRWRKMTGG---------GMR-QAGILAAAGLYALKH-NVARLQEDHDNAAWLAEQLREAGA 268 (333)
T ss_pred H-HHHHHHHHHhCC---------chh-hHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 222110000000 000 112333334444421 12333 555667899999998774
No 231
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.67 E-value=1.1e-14 Score=142.57 Aligned_cols=252 Identities=11% Similarity=-0.043 Sum_probs=160.2
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
+-..+|.+.+++.++++........+. +......++.+.+++++|.+. .+++++|++||..++..+...
T Consensus 57 gl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~-------~l~~~sG~~an~~ai~~l~~~- 128 (402)
T TIGR01821 57 GMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES-------ALVFTSGYVANDATLATLAKI- 128 (402)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe-------EEEECchHHHHHHHHHHhhCC-
Confidence 334568888888888765433222111 223344456666999998653 677778899998888776431
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCccc
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGE 217 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~ 217 (369)
..+..|+.....|.+....+...|+++..++. .|++++++.++ +++++|+++.++|++|.
T Consensus 129 ----------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~ 192 (402)
T TIGR01821 129 ----------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGD 192 (402)
T ss_pred ----------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCC
Confidence 01346666667899988888888887665542 25677777775 25789999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccc-cccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
+.|+++|.++|+++ ++++++|+||+.+.. +.-..- ..... ...+|.+..+..|.++++. |+++.++ +.
T Consensus 193 ~~~l~~i~~l~~~~------~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~G--G~i~~~~-~~ 262 (402)
T TIGR01821 193 IAPIEEICDLADKY------GALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGVVG--GYIAASR-KL 262 (402)
T ss_pred ccCHHHHHHHHHHc------CCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhccCC--ceeecCH-HH
Confidence 99999999999999 999999999985443 111100 00111 2246888778999986433 5665432 22
Q ss_pred ccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 296 LPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 296 ~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. +.+.. ...|. + .++.+....+++.++|+.+..+ ..+ +..++.+++++.|++.|+
T Consensus 263 ~-~~l~~~~~~~~------~--t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~ 320 (402)
T TIGR01821 263 I-DAIRSYAPGFI------F--TTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGI 320 (402)
T ss_pred H-HHHHHhCcCce------e--cCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 22211 11111 1 1122222344445666666444 333 567899999999998774
No 232
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=1.2e-16 Score=148.63 Aligned_cols=249 Identities=17% Similarity=0.138 Sum_probs=161.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+.|.+.+++.++..... .|+..+.+.++|+. +++++|.+. .+++.+||.||..++.+...+
T Consensus 7 ~~~~m~~a~~~a~~gd~-~Yg~D~~~~~l~~~----i~~l~g~e~-------a~f~~sGT~An~~al~~~~~~------- 67 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD-AYGEDPTTARLEER----IAELFGKEA-------ALFVPSGTMANQLALRAHLRP------- 67 (290)
T ss_dssp S-HHEEHHHHHTTSB-C-CTTSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHHHHT-------
T ss_pred CCHHHHHHHHccccCCc-ccCCChhHHHHHHH----HHHHcCCCE-------EEEeCCCChHHHHHHHHHHhc-------
Confidence 55777777744433333 46666677677666 889999985 679999999999999998753
Q ss_pred cCCCCCCCeEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCc-cc
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT-GE 217 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~t-G~ 217 (369)
...|++...+|....+.. .+.|++++.++.+++ +.+|+++|++.+.+ ++++|.++.+++.. |.
T Consensus 68 ------~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 68 ------GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp ------TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred ------CCceeccccceeeeeccchhhHhcCcEEEECCCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 358999999998655432 457888888887653 89999999999976 46788888887775 55
Q ss_pred C---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 218 ~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
+ +++++|.++|+++ ++.+|.|||=-+-....... ..-++ ..++|++++++.|.++.|.| ++++.+ ++
T Consensus 141 ~~s~~el~ai~~~a~~~------gl~lhmDGARl~~a~~~~~~-~~~e~-~~~~D~v~~~~tK~~g~~~G-avl~~~-~~ 210 (290)
T PF01212_consen 141 VYSLEELRAISELAREH------GLPLHMDGARLANAAAALGV-SLAEI-AAGADSVSFGGTKNGGAPGG-AVLAGN-KE 210 (290)
T ss_dssp ---HHHHHHHHHHHHHH------T-EEEEEETTHHHHHCHHHH-HHHHH-HTTSSEEEEETTSTT-SSSE-EEEEES-HH
T ss_pred eCCHHHHHHHHHHHHhC------ceEEEEehhhHHHhhhcccc-cHHHH-hhhCCEEEEEEEcccccccc-eEEEec-hH
Confidence 4 5788999999999 99999999832211110000 01111 35899999999999987775 556554 33
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHH--HH--HHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA--QY--YQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~--~~--~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~ 362 (369)
.+...... ..++++...+ .+. ..+ ++ .++..+ ..++... +..++|++|++.|++.|+.
T Consensus 211 ~i~~~~~~-~k~~gg~~~~-------~G~-~~a~~~~~~~~l~~l-~~~~~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 211 FIAKARRQ-RKRLGGGMRQ-------AGV-LAAAELYQFAALRAL-ELWLERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHHHHHH-HHHHTHHHHH-------TTH-HHHHHHHHHHHHCHE-ECSHHHHHCHHHHHHCHHHCHHEECEE
T ss_pred HHHHHHHH-HHHhccCeee-------cce-eeeechhhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 33222111 1222221100 011 111 12 223222 2345666 8899999999999998864
No 233
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=7.2e-16 Score=148.16 Aligned_cols=166 Identities=16% Similarity=0.072 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
.++++++++.+|++++ .+++|+|+++++.+++.++..+ .++.|+++.|+|..+...++..|++
T Consensus 60 ~~l~~~~a~~~g~~~~-----~I~~~~Gs~e~i~~~~~~~~~~------------g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-----QVLVSRGADEGIELLIRAFCEP------------GKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred HHHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------------CCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 3666779999999863 4899999999999988876432 1268999999999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC
Q 017569 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (369)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (369)
++.+|++++ +.+|++++++++ +++++|++++|+||||.+.+.+++.++++..++ +.++++|+||..+.. .
T Consensus 123 ~~~v~~~~~-~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~----~~~vivDEay~~f~~----~ 192 (351)
T PRK01688 123 IRTVPTLDN-WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG----KAIVVADEAYIEFCP----Q 192 (351)
T ss_pred EEEeecCCC-CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEECchhhcCC----C
Confidence 999999765 899999999988 588999999999999999998888888876421 578999999976431 1
Q ss_pred Cccccc-c-CCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 258 DLEWDF-R-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 258 ~~~~~~-~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
.....+ . ... =.+.-+..|+++ .+.+.|+++..
T Consensus 193 ~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~ 228 (351)
T PRK01688 193 ASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN 228 (351)
T ss_pred CChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC
Confidence 000111 1 111 133445788764 55667888763
No 234
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.1e-14 Score=139.27 Aligned_cols=241 Identities=17% Similarity=0.093 Sum_probs=169.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
++++.+.+++.+++..-..+|+ +...+++++ +++.+| .+. ..+++++|++|.+...+++++.+
T Consensus 35 gp~~~~~~~~~~~~~~~~rYPd--~~~~~l~~a----~a~~~~~~~~-----~~V~~gnGsde~i~~l~~~~~~~----- 98 (356)
T COG0079 35 GPPPKVIEAIRAALDKLNRYPD--PDYRELRAA----LAEYYGVVDP-----ENVLVGNGSDELIELLVRAFVEP----- 98 (356)
T ss_pred CCCHHHHHHHHHHHHhhccCCC--CcHHHHHHH----HHHHhCCCCc-----ceEEEcCChHHHHHHHHHHhhcC-----
Confidence 4457788888777653222222 345555555 888888 554 34788999999999998888663
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHH
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
++.|+++.++|..|...++..|++++.||..+ +.+|++.+.+++++++++|++++||||||..-+.++|.
T Consensus 99 --------gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~ 168 (356)
T COG0079 99 --------GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELR 168 (356)
T ss_pred --------CCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 46899999999999999999999999999886 89999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCc--EEEEcCcc-CCCCCCCeEEEEEeCCCCcccccc-
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVK--SINVSGHK-YGLVYAGVGWVVWRTKDDLPDELV- 301 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D--si~~~~hK-~l~~p~g~g~l~~~~~~~~~~~~~- 301 (369)
++++..++ +.++++|+||..+.- +. .... +..-+ .+.=+..| ++..+..+|+.+. +++.. ..+.
T Consensus 169 ~l~~~~~~----~~~vVvDEAY~eF~~----~~-~~~l-~~~~~nlivlRTfSKa~gLAGlRlGy~ia-~~~~i-~~l~~ 236 (356)
T COG0079 169 ALLEALPE----GGLVVIDEAYIEFSP----ES-SLEL-LKYPPNLIVLRTFSKAFGLAGLRVGYAIA-NPELI-AALNK 236 (356)
T ss_pred HHHHhCCC----CcEEEEeCchhhcCC----ch-hhhh-ccCCCCEEEEEecHHhhhcchhceeeccC-CHHHH-HHHHH
Confidence 99997632 789999999987543 11 0110 00112 22223567 5677788898654 33333 2221
Q ss_pred cccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH---HhhHHHHHHHHHHHhcC
Q 017569 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF---CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 302 ~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~---~~~~~a~~l~~~L~~~g 360 (369)
...+|. ...+++.++...+....+.+. +..+-.+++.+.|+.+|
T Consensus 237 vr~p~~---------------v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 237 VRPPFN---------------VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred hcCCCC---------------CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111221 124455555565554444333 77788889999999988
No 235
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=1.1e-15 Score=147.15 Aligned_cols=220 Identities=16% Similarity=0.038 Sum_probs=149.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~ 171 (369)
...+|+++ +++.+|+++ ..+++|+|+++++.+++.++..+ | +++|+++.|+|..+...+
T Consensus 61 ~~~~Lr~a----ia~~~~~~~-----~~I~it~Gs~~~i~~~~~~~~~~--------g----~d~vlv~~P~y~~y~~~~ 119 (354)
T PRK04635 61 QPPELINA----YSAYAGVAP-----EQILTSRGADEAIELLIRAFCEP--------G----QDSIACFGPTYGMYAISA 119 (354)
T ss_pred CHHHHHHH----HHHHhCcCH-----HHEEEeCCHHHHHHHHHHHhcCC--------C----CCeEEEcCCChHHHHHHH
Confidence 34555555 777889886 34899999999999988877542 1 268999999999999999
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
+..|++++.+|++++ +.+|++.++ .+ +++++|++++|+||||.+.+.+++.++++... ++++++|++|..+.
T Consensus 120 ~~~g~~v~~v~~~~~-~~~~~~~l~-~~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~-----~~~vivDeay~~~~ 191 (354)
T PRK04635 120 ETFNVGVKALPLTAD-YQLPLDYIE-QL-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP-----DAIVVVDEAYIEFC 191 (354)
T ss_pred HHcCCEEEEEecCCC-CCCCHHHHH-hc-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC-----CcEEEEeCchHhhc
Confidence 999999999999764 889999887 34 68999999999999999999999999998742 68999999997643
Q ss_pred ccccCCCcccccc--CCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHH
Q 017569 252 APFLYPDLEWDFR--LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (369)
Q Consensus 252 ~~~~~~~~~~~~~--~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~ 328 (369)
. .....++. ..++ .+.-+.+|+++ .+.+.|+++..+ +.. +.+... . ..+ +- ....+
T Consensus 192 ~----~~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~-~~l~~~----~---~~~----~~---~~~~~ 250 (354)
T PRK04635 192 P----EYSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELI-EILMRV----I---APY----PV---PLPVS 250 (354)
T ss_pred c----CcchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHH-HHHHhh----c---CCC----CC---CHHHH
Confidence 2 11111111 1222 34556899974 567789988643 222 221110 0 001 11 12223
Q ss_pred HHHHHHhcHhhHHHH-----HhhHHHHHHHHHHHhcCC
Q 017569 329 YYQFIRLGFEVIPSF-----CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 329 ~~~l~~lg~~G~~~~-----~~~~~a~~l~~~L~~~g~ 361 (369)
.+++..+...|.+.+ +..+..+++.+.|++.|.
T Consensus 251 ~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 288 (354)
T PRK04635 251 EIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGG 288 (354)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 344455533333322 455556788889988763
No 236
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.67 E-value=6.8e-15 Score=141.94 Aligned_cols=221 Identities=18% Similarity=0.067 Sum_probs=153.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
|....+|+. ++++.|.+. ...+++|+.|+..++.++... ++.|+++...|......
T Consensus 55 Pt~~~le~~----la~Le~g~~-------a~~~~SGmaAi~~~l~~ll~~-------------Gd~iv~~~~~Y~~t~~~ 110 (386)
T PF01053_consen 55 PTVRALEQR----LAALEGGED-------ALLFSSGMAAISAALLALLKP-------------GDHIVASDDLYGGTYRL 110 (386)
T ss_dssp HHHHHHHHH----HHHHHT-SE-------EEEESSHHHHHHHHHHHHS-T-------------TBEEEEESSSSHHHHHH
T ss_pred ccHHHHHHH----HHHhhcccc-------eeeccchHHHHHHHHHhhccc-------------CCceEecCCccCcchhh
Confidence 455566655 889988864 788899999999988887652 46888888877655444
Q ss_pred H----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC-ceEEeec
Q 017569 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVDA 245 (369)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~-~~l~vD~ 245 (369)
+ ...|+++.+++.. |+++|+++++++|++|++-.|+||+..+.|+++|+++|+++ + ++++||.
T Consensus 111 ~~~~l~~~gv~v~~~d~~------d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~------g~~~~vVDn 178 (386)
T PF01053_consen 111 LEELLPRFGVEVTFVDPT------DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEH------GDILVVVDN 178 (386)
T ss_dssp HHHCHHHTTSEEEEESTT------SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHT------TT-EEEEEC
T ss_pred hhhhhcccCcEEEEeCch------hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHh------CCceEEeec
Confidence 4 3468888777542 68999999999999999999999999999999999999999 8 9999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
.++.++. ..| +. .++|.+.-|.-|++++... .|++++++.......+.......+. ..
T Consensus 179 T~atp~~--~~p---L~---~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~------------~~ 238 (386)
T PF01053_consen 179 TFATPYN--QNP---LE---LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGA------------TL 238 (386)
T ss_dssp TTTHTTT--C-G---GG---GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-------------B-
T ss_pred cccceee--ecc---Cc---CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCc------------cc
Confidence 9886433 222 22 2799999999999976543 4777776522221111111111111 22
Q ss_pred HHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 324 QIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
.+..+|..++.+..-..+-.++.++|+.++++|++.+.+++-+|
T Consensus 239 ~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~y 282 (386)
T PF01053_consen 239 SPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYY 282 (386)
T ss_dssp -HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred hHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46777877776554444422999999999999999998876554
No 237
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=9.2e-15 Score=139.69 Aligned_cols=186 Identities=16% Similarity=0.153 Sum_probs=136.4
Q ss_pred CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
++++.+.+.+.+++.. +...|. .++..+++++ +++++|+++ ..+++|+|+++++...+.++ .
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~----ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~--~----- 93 (337)
T PRK03967 31 DLPEELKEEIFEELKRVPFNRYP-HITSDPLREA----IAEFYGLDA-----ENIAVGNGSDELISYLVKLF--E----- 93 (337)
T ss_pred CCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHH----HHHHhCcCc-----ceEEEcCCHHHHHHHHHHHh--C-----
Confidence 3456677777777753 334443 3466666666 666667765 34889999999987655443 1
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHH
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
++.|+++.++|..+...++..|++++.++++++ +.+|++.+++++ ++++++++++|+||||.+.+.++|.
T Consensus 94 --------gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~ 163 (337)
T PRK03967 94 --------GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED-FTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEIL 163 (337)
T ss_pred --------CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 468999999999888888999999999999764 899999998875 5678888999999999999999999
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
+++ ++ ++++++|++|..+.. ........ ...+ .+..+.-|.++ ....+|+++..
T Consensus 164 ~i~-~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 164 KVL-ET------GKPVVLDEAYAEFSG----KSLIGLIDEYPNL-ILLRTFSKAFGLAGIRAGYAIAN 219 (337)
T ss_pred HHH-hc------CCEEEEECchhhhcc----cchHHHHhhCCCE-EEEecchHhhcchhhhheeeecC
Confidence 999 47 999999999986431 11000111 1121 33456889886 66889999873
No 238
>PLN02397 aspartate transaminase
Probab=99.66 E-value=4.2e-15 Score=146.26 Aligned_cols=212 Identities=14% Similarity=0.007 Sum_probs=136.5
Q ss_pred ccccccc-cCCC-hH----HHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH-
Q 017569 58 LNLASFV-TTWM-EP----ECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA- 129 (369)
Q Consensus 58 ~~l~~~~-~~~~-~~----~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a- 129 (369)
++++.+. +++. .+ .+.++....++.+ ...|....|..+|++++.+|+.+..+....+ ......-+.+|+.+
T Consensus 51 l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-~~i~~~~i~~g~Ga~ 129 (423)
T PLN02397 51 LNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-NRVATVQCLSGTGSL 129 (423)
T ss_pred EecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-CeeEeeecccchHHH
Confidence 5666553 4432 23 3444433333333 3357777899999999888886543222111 00001213444434
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHh---hcCc
Q 017569 130 -IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENTI 204 (369)
Q Consensus 130 -~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~---~~~~ 204 (369)
+..++..... .+++|++++|+|+.+...++..|++++.+|+ +++++.+|++.+++.+. ++++
T Consensus 130 ~l~~~~~~~~~-------------pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~ 196 (423)
T PLN02397 130 RLGAEFLARFY-------------PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSF 196 (423)
T ss_pred HHHHHHHHHhC-------------CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCE
Confidence 3333333322 2479999999999999999999999999998 44458999999988876 4678
Q ss_pred EEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeeccccccccccc-CCCcc-ccccCCCCcEEEE-cCccC
Q 017569 205 CVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLE-WDFRLPLVKSINV-SGHKY 278 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~-~~~~~~~~Dsi~~-~~hK~ 278 (369)
++++++|+||||.+- .+++|+++|+++ ++|+++|.+|..+...-. .+... ..+...+-..+++ +.-|.
T Consensus 197 ~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~------~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~ 270 (423)
T PLN02397 197 VLLHACAHNPTGVDPTPEQWEQISDLIKSK------NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKN 270 (423)
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECccc
Confidence 888899999999994 577889999999 999999999987653100 00001 1111112124444 57888
Q ss_pred CC-CCCCeEEEE
Q 017569 279 GL-VYAGVGWVV 289 (369)
Q Consensus 279 l~-~p~g~g~l~ 289 (369)
++ .++++|+++
T Consensus 271 ~~~~G~RvG~~v 282 (423)
T PLN02397 271 MGLYGERVGALS 282 (423)
T ss_pred CCCccccceEEE
Confidence 76 589999986
No 239
>PRK07908 hypothetical protein; Provisional
Probab=99.66 E-value=1e-14 Score=139.95 Aligned_cols=190 Identities=13% Similarity=0.008 Sum_probs=134.1
Q ss_pred cccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
.|....+. ++++.+.+++.++++.. ..|....+..+++++ +++.+|+++ ..+++|+|+++++.+++. +
T Consensus 26 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~a----ia~~~~~~~-----~~I~it~Ga~~al~~~~~-l 94 (349)
T PRK07908 26 DFAVNVRHDTPPEWLRERLAARLGDL-AAYPSTEDERRARAA----VAARHGRTP-----DEVLLLAGAAEGFALLAR-L 94 (349)
T ss_pred EecCCCCCCCCCHHHHHHHHHHhhHh-hcCCCccchHHHHHH----HHHHhCcCh-----hhEEECCCHHHHHHHHHh-c
Confidence 34433333 34566788888776532 233333455566555 666678775 348999999999987666 2
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
. ++.+++..|++..+...++..|++++.+|++++ +.+|++++ +++++++++++|+||||.
T Consensus 95 -~--------------~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~~~~~~i~l~np~NPTG~ 154 (349)
T PRK07908 95 -R--------------PRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----PDDADLVVIGNPTNPTSV 154 (349)
T ss_pred -C--------------CCeEEEeCCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----ccCCCEEEEcCCCCCCCC
Confidence 2 135667789998888899999999999999865 88998854 457889999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEE-cCccCCC-CCCCeEEEEEe
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINV-SGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~-~~hK~l~-~p~g~g~l~~~ 291 (369)
+.+.++|.++|+ + +.++++|++|+.+.. .. ...+. ...-+.+.+ +.+|.++ .+..+|+++..
T Consensus 155 ~~~~~~l~~l~~-~------~~~iIvDe~y~~~~~---~~--~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~ 219 (349)
T PRK07908 155 LHPAEQLLALRR-P------GRILVVDEAFADAVP---GE--PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA 219 (349)
T ss_pred CcCHHHHHHHHh-c------CCEEEEECcchhhcc---CC--ccccccccCCCEEEEeecccccCCccceeeeeecC
Confidence 999999999995 5 678889999986431 11 11111 112245666 6889764 66788999864
No 240
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.66 E-value=1.2e-14 Score=140.32 Aligned_cols=269 Identities=12% Similarity=-0.012 Sum_probs=166.6
Q ss_pred HHHHHHHhhhhcCCCCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCCC
Q 017569 42 AYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAV 119 (369)
Q Consensus 42 i~~~l~~~~~~~~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~ 119 (369)
.+..+.......+++.++|....|..+ ++.+.+++.+..+. ..|....+..++++++.+|+.+.+|.+ .+. ..
T Consensus 14 ~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~---~~ 88 (364)
T PRK07865 14 TLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP---AA 88 (364)
T ss_pred HHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc---cc
Confidence 333343332334445566666655433 46677777665432 245555678899999999999988865 321 35
Q ss_pred eEEeCCchHHHHHHHHHH-HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~ 198 (369)
+++|+|+++++..++.++ .. .++.|++++++|+.+..+++.+|+++..++. +++++.
T Consensus 89 I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------~~~l~~- 146 (364)
T PRK07865 89 VLPVIGSKELVAWLPTLLGLG-------------PGDVVVIPELAYPTYEVGARLAGATVVRADS--------LTELGP- 146 (364)
T ss_pred EEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcccHHHHHHhcCCEEEecCC--------hhhCCc-
Confidence 899999999998766654 22 1478999999999999999999998877642 223322
Q ss_pred HhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccccC---C-CCcE
Q 017569 199 VDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRL---P-LVKS 270 (369)
Q Consensus 199 i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~---~-~~Ds 270 (369)
+++++|+++.|+||||.+.+ +++|.++|+++ ++++++|++|+.+... .+... ..... . .-..
T Consensus 147 --~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~i 216 (364)
T PRK07865 147 --QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER------GAVVASDECYLELGWD--AEPVSILDPRVCGGDHTGLL 216 (364)
T ss_pred --ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhhhccC--CCCCccccccccCCccceEE
Confidence 56889999999999998854 67888999999 9999999999864431 11000 00000 0 1124
Q ss_pred EEEcCccCC-CCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--Hhh
Q 017569 271 INVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCV 346 (369)
Q Consensus 271 i~~~~hK~l-~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~ 346 (369)
++.+..|.+ ....++|+++.. ++.. ..+....... . .+. ..+.+.++...+..+. +++. ...
T Consensus 217 ~~~S~SK~~~~~GlRiG~i~~~-~~~~-~~~~~~~~~~-----~----~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~ 282 (364)
T PRK07865 217 AVHSLSKQSNLAGYRAGFVAGD-PALV-AELLEVRKHA-----G----MMV---PAPVQAAMVAALGDDAHVREQRERYA 282 (364)
T ss_pred EEeechhccCCCceeeEEEecC-HHHH-HHHHHHHHhc-----C----CCc---CHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555688986 456778988753 3222 2221100000 0 011 1223333344443322 3333 667
Q ss_pred HHHHHHHHHHHhcCC
Q 017569 347 DHKKLSSFFVIHSSY 361 (369)
Q Consensus 347 ~~a~~l~~~L~~~g~ 361 (369)
+..+++.+.|++.|+
T Consensus 283 ~~~~~l~~~L~~~g~ 297 (364)
T PRK07865 283 RRRAVLRPALEAAGF 297 (364)
T ss_pred HHHHHHHHHHHHcCC
Confidence 778888888887663
No 241
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.66 E-value=6.7e-15 Score=141.77 Aligned_cols=186 Identities=20% Similarity=0.168 Sum_probs=135.3
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 017569 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (369)
Q Consensus 83 n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~ 162 (369)
....|....+..++++++.+++.+-.|.+.+. ....++++|+.+++..++..+... .++.|+++.|
T Consensus 36 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~~~~G~~~~~~~~~~~~~~~------------~~~~vlv~~P 101 (363)
T PF00155_consen 36 SFLGYPPPQGYPELREAIADFLGRRYGVPVDP--EANILVTSGAQAALFLLLRLLKIN------------PGDTVLVPDP 101 (363)
T ss_dssp GCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG--GEGEEEESHHHHHHHHHHHHHHSS------------TTSEEEEEES
T ss_pred ccccCCCchhhHHHHHHHHHHhhhccCccccc--ceEEEEecccccchhhhhhccccc------------ccccceecCC
Confidence 34556666789999999888888666666532 124667766666665555554210 1468999999
Q ss_pred CcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhh
Q 017569 163 VQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKN 232 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~ 232 (369)
.|..+...++..|+.++.+|++ ++++.+|+++|++.+++ ++++|+++.|+||||..-+ +++|+++|+++
T Consensus 102 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~- 180 (363)
T PF00155_consen 102 CYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREY- 180 (363)
T ss_dssp SSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHT-
T ss_pred ccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccc-
Confidence 9999999999999999999975 34589999999999998 5789999999999999855 55666669999
Q ss_pred hccCCCceEEeecccccccccccCCCc---cccccCCCCc-EEEEcCccCCCC-CCCeEEEEEe
Q 017569 233 EETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVK-SINVSGHKYGLV-YAGVGWVVWR 291 (369)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~D-si~~~~hK~l~~-p~g~g~l~~~ 291 (369)
++++++|.+|+.+... .+.. ...+ ....+ .+..|..|.++. ....|++++.
T Consensus 181 -----~~~ii~De~y~~~~~~--~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRvG~i~~~ 236 (363)
T PF00155_consen 181 -----NIIIIVDEAYSDLIFG--DPDFGPIRSLL-DEDDNVIVVGSLSKSFGLPGLRVGYIVAP 236 (363)
T ss_dssp -----TSEEEEEETTTTGBSS--SSHTHHHHGHH-TTTSTEEEEEESTTTTTSGGGTEEEEEEE
T ss_pred -----ccceeeeeceeccccC--CCccCcccccc-cccccceeeeeccccccccccccccccch
Confidence 9999999999986651 1110 1112 22333 566679997654 4688999983
No 242
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.6e-14 Score=139.13 Aligned_cols=202 Identities=14% Similarity=0.067 Sum_probs=141.5
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+...+. .+++.+.+.+.+++.. ...|. .++..+|+++ +++.+++++ ..+++|+|+++++.+++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~lr~~----ia~~~~~~~-----~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 32 LVKLSSNENPHGPSPAAVEAIREAAER-VHSYP-KASHADLTAA----LADRWDVSP-----EQVWLANGGDGALDYLAR 100 (357)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhh-hhcCC-CCCHHHHHHH----HHHHhCCCc-----ceEEECCCHHHHHHHHHH
Confidence 3455554333 3456677777766643 23332 3455566655 566667775 348999999999988888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
++.++ ++.|++++|+|..+...+...|++++.+|++. +++.+|.+++++.+ +++++|+++.|+||
T Consensus 101 ~~~~~-------------gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NP 166 (357)
T PRK14809 101 AMLDP-------------GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNP 166 (357)
T ss_pred HhcCC-------------CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCC
Confidence 76542 46899999999888888888999999999864 45788998888776 46789999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEE-EEcCccCCC-CCCCeEEEEEe
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI-NVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi-~~~~hK~l~-~p~g~g~l~~~ 291 (369)
||.+.+.+++.++++...+ ++++++|++|+.+.. .+.....+. ..-..+ ..+.-|.++ ....+|+++..
T Consensus 167 TG~~~s~~~~~~l~~~~~~----~~~iI~De~y~~~~~---~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~~ 237 (357)
T PRK14809 167 TGSEIPLDEVEALAERTDE----ETLVVVDEAYGEFAE---RPSAVALVE-ERDDVAVLRTFSKAYGLAGLRLGYAVVP 237 (357)
T ss_pred CCcCCCHHHHHHHHHhCcc----CcEEEEechhhhccC---CchhHHHHh-hCCCEEEEecchhHhcCcchhheeeecC
Confidence 9999998888888876521 679999999987542 111000111 111233 345778875 67889999874
No 243
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.1e-14 Score=141.00 Aligned_cols=253 Identities=11% Similarity=-0.001 Sum_probs=163.5
Q ss_pred cccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
+|....+. ++++.+.+++.+++... ..|.. +...+|+++ +++.+++++ ..+++|+|+++++..++.++
T Consensus 36 ~l~~~~~~~~~~~~~~~a~~~~~~~~-~~Y~~-~~~~~Lr~~----ia~~~~~~~-----~~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 36 RIGANESGFGPSPSVIAAMREAAAEI-WKYGD-PENHDLRHA----LAAHHGVAP-----ENIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHh-hcCCC-CccHHHHHH----HHHHhCCCH-----HHEEEcCCHHHHHHHHHHHh
Confidence 44444333 34567777777665422 22221 234555555 666678765 24899999999998887776
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTG 216 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG 216 (369)
.++ ++.|++++++|+.+...++..|++++.+|++.+ .+|++++++.+. +++++|+++.|+||||
T Consensus 105 ~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG 169 (369)
T PRK08153 105 VEP-------------GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD--REDLDALLDAARRENAPLVYLANPDNPMG 169 (369)
T ss_pred cCC-------------CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcccCCcEEEEeCCCCCCC
Confidence 442 478999999999999888899999999998654 589999987764 5788999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCc-EEEEcCccCCC-CCCCeEEEEEeCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVK-SINVSGHKYGL-VYAGVGWVVWRTKD 294 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D-si~~~~hK~l~-~p~g~g~l~~~~~~ 294 (369)
.+.+.+++.++++..++ ++++++|++|+.+... ... ..+....-+ .+..+..|.++ .+...|+++... +
T Consensus 170 ~~~~~~~l~~l~~~~~~----~~~lI~DE~y~~~~~~---~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-~ 240 (369)
T PRK08153 170 SWHPAADIVAFIEALPE----TTLLVLDEAYCETAPA---GAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-G 240 (369)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEeCchhhhcCc---ccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH-H
Confidence 99999888888876521 7899999999864321 100 111111112 33445778875 677889998742 2
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. +.+..... .+ + ...+.++++...+..+. +++. ...++.+++.+.|++.|+
T Consensus 241 ~~-~~l~~~~~-------~~----~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g~ 295 (369)
T PRK08153 241 TI-KAFDKVRN-------HF----G---MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANGL 295 (369)
T ss_pred HH-HHHHHhhc-------CC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 22 22211000 01 1 12344555555554333 3333 566777788888887764
No 244
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.66 E-value=9.9e-15 Score=134.56 Aligned_cols=230 Identities=17% Similarity=0.137 Sum_probs=155.2
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC----Ccc
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN----VQV 165 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~----~h~ 165 (369)
.|-...||++ ++.+-|--. .+.+.+|..|+.+++..+... ++.|+.+.. ++.
T Consensus 61 NPT~~vlE~R----iAaLEGG~a-------a~a~aSG~AA~~~ai~~la~a-------------GD~iVss~~LYGGT~~ 116 (426)
T COG2873 61 NPTTDVLEER----IAALEGGVA-------ALAVASGQAAITYAILNLAGA-------------GDNIVSSSKLYGGTYN 116 (426)
T ss_pred CchHHHHHHH----HHHhhcchh-------hhhhccchHHHHHHHHHhccC-------------CCeeEeeccccCchHH
Confidence 4667778877 777765542 678889999999999987653 467776654 334
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
-+....+.+|+++++|+.+ |++.++++|+++|++|++..-.||.+.+-|+++|+++||++ +++++||.
T Consensus 117 lf~~tl~~~Gi~v~fvd~~------d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~------gvpliVDN 184 (426)
T COG2873 117 LFSHTLKRLGIEVRFVDPD------DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRH------GVPLIVDN 184 (426)
T ss_pred HHHHHHHhcCcEEEEeCCC------CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHc------CCcEEEec
Confidence 4566678899999999754 58999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCC--CCc-cccc----ccccCccCCCCCC-cc-
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTK--DDL-PDEL----VFHINYLGSDQPT-FT- 315 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~--~~~-~~~~----~~~~~y~~~~~~~-~~- 315 (369)
..+..++ ++| ++ .++|.++-|.-||+++.. ..|-+++-.. ++. ...+ ..++.|-+-...+ +.
T Consensus 185 T~atpyl--~rP---~~---hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~ 256 (426)
T COG2873 185 TFATPYL--CRP---IE---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGN 256 (426)
T ss_pred CCCccee--cch---hh---cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhccc
Confidence 9886543 333 22 389999999999986643 2344444222 111 0010 0122232211100 00
Q ss_pred --------ccCCcc---hhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCc
Q 017569 316 --------LNFSKG---SSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 316 --------l~~tr~---~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~ 363 (369)
..+-|. ...+...|..++-+..-.++.-|+.+||..+++.|+.++.++
T Consensus 257 ~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~ 315 (426)
T COG2873 257 AAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVA 315 (426)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCee
Confidence 011121 123445555444443333332299999999999999988765
No 245
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.66 E-value=5.5e-14 Score=132.01 Aligned_cols=314 Identities=12% Similarity=0.037 Sum_probs=197.9
Q ss_pred cccccccc-chhHhhh--CCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccc-cccCCChHHHH-HHHH--HHhcc-C
Q 017569 12 EILSSTFA-SRYVRAA--IPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLAS-FVTTWMEPECD-KLVM--ASINK-N 83 (369)
Q Consensus 12 ~~~~~~~~-~~~~~~~--~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~-~~~~~~~~~v~-~~~~--~~~~~-n 83 (369)
++++++|. ..|..-+ .+...-...+.++.++++.++.+...|.....-++. +-.+..|+.+. .++. +.+.. .
T Consensus 29 ~Sld~L~~~~IP~~Ir~~~~~~~~~~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYT 108 (450)
T COG0403 29 SSLDELFSQDIPPSIRKKLDTLLPLPKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYT 108 (450)
T ss_pred CCHHHHhhccCCHHHHhcccccCCCCCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCC
Confidence 56788888 5554222 222222334569999999999987766533221232 23334455554 3333 12222 2
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 017569 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (369)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~ 163 (369)
+++++.++|.-+...+.+.++++|.|++.. +...--++|.+--.++++.|.. +.++.+++++...
T Consensus 109 PYQpEISQGrLqaLfefQtlv~dLTGm~VA-----NASm~DeaTAaAEAm~ma~r~~----------k~k~~~~~V~~~v 173 (450)
T COG0403 109 PYQPEISQGRLEALFEFQTLVADLTGLDVA-----NASMLDEATAAAEAMLMAKRVT----------KKKRNKFLVPKDV 173 (450)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHhCCCcc-----cchhhhhHHHHHHHHHHHHHhh----------cCcCceEEecCCC
Confidence 444455667666667888999999999963 3455556664443333433332 1124689999999
Q ss_pred cchHHHHHhh----hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc-cCCCHHHHHHHHHHhhhccCCC
Q 017569 164 QVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG-EFEDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 164 h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG-~~~~l~~I~~l~~~~~~~~~~~ 238 (369)
|+.....++. +|++++.++.+ |.++|+++.+.++.++++.+|++. | ...++.+|.+.+|++ +
T Consensus 174 hpqt~~Vl~Tra~~~g~~i~~~~~~------d~~~l~~~~~~~~~gv~vQyP~~~-G~~~~d~~~l~~~~h~~------~ 240 (450)
T COG0403 174 HPQTLDVLRTRAEGLGIEIEVVDAD------DLDDLESADDGDVFGVLVQYPNTF-GIVEEDLRALIEAAHSA------G 240 (450)
T ss_pred CHHHHHHHHhhcccCceEEEEeccc------hhhhhhhccccCeEEEEEecCCCC-CccchhHHHHHHHHhhc------C
Confidence 9987777654 35555555544 778888883347899999999866 6 677899999999999 8
Q ss_pred ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC----CCCCCeEEEEEeCCCC--ccccccc-ccCccCCCC
Q 017569 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDD--LPDELVF-HINYLGSDQ 311 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l----~~p~g~g~l~~~~~~~--~~~~~~~-~~~y~~~~~ 311 (369)
.+++|=+=--. +..+.| +- -.|+|.++.+++-++ ++++.+|++.+|++-. .+..+.. +.+-.+...
T Consensus 241 al~~v~aDpla--L~LL~p--PG---e~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A 313 (450)
T COG0403 241 ALVIVAADPLA--LGLLKP--PG---EFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRA 313 (450)
T ss_pred CEEEEEechhH--hhccCC--cc---ccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCch
Confidence 87775321111 111222 11 238999999999984 5556688999886421 1111110 111111110
Q ss_pred CCccc---------------cCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 312 PTFTL---------------NFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 312 ~~~~l---------------~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
...+| -||.....++..-+++.++|.+|++++ +.++++.||+++|++.+
T Consensus 314 ~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~ 379 (450)
T COG0403 314 FRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG 379 (450)
T ss_pred hhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 00111 288888777888888899999999999 99999999999999655
No 246
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.65 E-value=3.2e-15 Score=143.59 Aligned_cols=236 Identities=10% Similarity=0.027 Sum_probs=160.0
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 017569 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (369)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~ 168 (369)
.++...++-+++.+.+.++++.+.+ ....+++.|||.++-.++..+... .+.+|++....-..+.
T Consensus 33 Rs~~F~~i~~e~~~~L~~l~~~~~~---~~v~~l~GsGT~a~Eaa~~nl~~~------------~g~~vLv~g~FG~r~~ 97 (374)
T TIGR01365 33 RSKLGKEKLAEAIKKTREMLGVPAD---YLIGIVPASDTGAVEMALWSMLGC------------RGVDVLAWESFGKGWV 97 (374)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC---cEEEEECCchHHHHHHHHHHcCCC------------CCCeEEEECHHHHHHH
Confidence 4677888999999999999998632 123566889999998888876531 1346666542112234
Q ss_pred -HHHhhhcce-eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 169 -KFARYFEVE-LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 169 -~~~~~~G~~-v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
++++.+|++ +..++.+.. -.+|+++++. + +.|.+++..|.||...|+++|++.+ + +..++||+.
T Consensus 98 ~eia~~~g~~~v~~l~~~~g-~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~--~------~~lliVDav 163 (374)
T TIGR01365 98 TDVTKQLKLPDVRVLEAEYG-KLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPAD--R------EGLTICDAT 163 (374)
T ss_pred HHHHHhcCCCCcEEEcCCCC-CCCCHHHcCC--C---CCEEEecCCCchheecccccccccc--C------CCcEEEEcc
Confidence 788889994 888876653 5889999873 1 2367999999999999997666322 5 789999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccc-cc--c-cCccCCCC--------CCc
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL-VF--H-INYLGSDQ--------PTF 314 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~-~~--~-~~y~~~~~--------~~~ 314 (369)
.+.+..| ++++ ++|.+..++||++++|+|.|+++++++.+..... .. + +.|+.... ...
T Consensus 164 Ss~g~~~-------l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
T TIGR01365 164 SAAFAQD-------LDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEG 234 (374)
T ss_pred chhcCCC-------CChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcC
Confidence 8766552 3333 5999999999999999999999998764321010 00 0 01111000 011
Q ss_pred cccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 315 TLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 315 ~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
....|.+.....++..+|+.+..+ |++.+ |+.++++.+++.++++|++
T Consensus 235 ~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l 285 (374)
T TIGR01365 235 STINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWI 285 (374)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 122344343334444445555565 89999 9999999999999999954
No 247
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.65 E-value=3.6e-14 Score=135.83 Aligned_cols=204 Identities=16% Similarity=0.061 Sum_probs=138.7
Q ss_pred HHHHHHHHHhhhhcC-CCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 017569 40 EAAYQVINDELMLDG-NPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~-~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (369)
++.++.+++....-+ .|-+ .|..-..+|.+.++..++++... +..++.+++.+.+++++|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g~~~e----- 72 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLY---DLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLGGPEE----- 72 (346)
T ss_pred HHHHHHHHHHHhccCCcccc---ccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcCCCcc-----
Confidence 445566665554333 2322 23333445667777777765432 4557778888889999999652
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec---CCCcchHHHHHhhhcceeEEEeccCCccccCHHHH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG---ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s---~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L 195 (369)
..++++||++||..++.++.++ ++.|+++ .+.|.++...+++.|+++... .|++++
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~~-------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--------~~l~~l 131 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEPP-------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--------DELSEL 131 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCCC-------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--------CCHHHH
Confidence 3899999999999998887542 4677764 579999999999999875322 134444
Q ss_pred HHHHhhcCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEE
Q 017569 196 VELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (369)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~ 272 (369)
+. .+++++|+++ +++++|.+ .|+++|+++|+++ ++|+++|+||+.+...... .. .....++|.++
T Consensus 132 ~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~------~~~livDEAy~~~~~~~~~-~~--~~~~~~~divv 199 (346)
T TIGR03576 132 KK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK------EAIVLVDDASGARVRRLYG-QP--PALDLGADLVV 199 (346)
T ss_pred hh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc------CCEEEEECCccccccccCC-CC--CHHHcCCcEEE
Confidence 32 2457777764 57888988 7899999999999 9999999999976532111 11 11112478888
Q ss_pred EcCccCCCCCCCeEEEEEeC
Q 017569 273 VSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 273 ~~~hK~l~~p~g~g~l~~~~ 292 (369)
.+.+|++.++ ..|+++.++
T Consensus 200 ~s~SKalaG~-r~G~v~~~~ 218 (346)
T TIGR03576 200 TSTDKLMDGP-RGGLLAGRK 218 (346)
T ss_pred eccchhcccc-ceEEEEeCH
Confidence 8999976444 468887643
No 248
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.65 E-value=3e-14 Score=137.26 Aligned_cols=269 Identities=11% Similarity=-0.034 Sum_probs=165.2
Q ss_pred HHHHHHHHHhhhhcCCCCccccccccCCC-hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCC
Q 017569 40 EAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKT 117 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~~p~~~l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~ 117 (369)
..++....+.. .+++..++|+...|..+ ++.+.+++.++... ..|....+..++++++.+++++.+|.+ .+.
T Consensus 7 ~~~~~~~~~~~-~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--- 80 (357)
T TIGR03539 7 DSLAPYKAKAA-SHPDGIVDLSVGTPVDPVPPLIRAALAAAADA--PGYPQTWGTPELREAIVDWLERRRGVPGLDP--- 80 (357)
T ss_pred HHHHHHHHHhh-hCCCCeEEccCCCCCCCCCHHHHHHHHHHHhh--CCCCcccCCHHHHHHHHHHHHHhcCCCCCCc---
Confidence 33444444332 23344456666555433 46677777665432 334445678899999999999987765 422
Q ss_pred CCeEEeCCchHHHHHHHHHH-HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHH
Q 017569 118 AVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (369)
Q Consensus 118 ~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (369)
..+++|+|+++++..++.++ .+ .++.|++++++|..+...++.+|++++.++ |++++.
T Consensus 81 ~~I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~l~ 139 (357)
T TIGR03539 81 TAVLPVIGTKELVAWLPTLLGLG-------------PGDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTELD 139 (357)
T ss_pred CeEEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcHHHHHHHHhcCCEEeccC--------ChhhcC
Confidence 35889999999998876654 22 147899999999999999999998877663 222222
Q ss_pred HHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-cccccCCC----C
Q 017569 197 ELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPL----V 268 (369)
Q Consensus 197 ~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~----~ 268 (369)
.+++++|+++.|+||||.+-+ +++|.++|+++ ++++++|++|+.+.. -.+.. ..+-.... -
T Consensus 140 ---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~ 208 (357)
T TIGR03539 140 ---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARER------GAVVASDECYLELGW--EGRPVSILDPRVCGGDHTG 208 (357)
T ss_pred ---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc------CeEEEEecchhhhcc--CCCCccceecccCCCcccc
Confidence 247889999999999999854 77799999999 999999999975432 11100 00000000 1
Q ss_pred cEEEEcCccCC-CCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--H
Q 017569 269 KSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--C 344 (369)
Q Consensus 269 Dsi~~~~hK~l-~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~ 344 (369)
-.+..+..|.+ ...+.+|+++.. ++.. ..+.. ...... .+. ..+.+.++...+.. ..++.. +
T Consensus 209 vi~~~S~SK~~~~~G~R~G~~i~~-~~~~-~~~~~-~~~~~~--------~~~---~~~~q~~~~~~l~~~~~~~~~~~~ 274 (357)
T TIGR03539 209 LLAVHSLSKRSNLAGYRAGFVAGD-PALV-AELLT-VRKHAG--------LMV---PAPVQAAMVAALGDDGHVAEQKAR 274 (357)
T ss_pred EEEEeccccccCCCceeEEEEecC-HHHH-HHHHH-HHhhcc--------cCC---CHHHHHHHHHHcCCHHHHHHHHHH
Confidence 24445688875 566778998753 2222 12111 000000 011 12334444444432 233333 5
Q ss_pred hhHHHHHHHHHHHhcC
Q 017569 345 CVDHKKLSSFFVIHSS 360 (369)
Q Consensus 345 ~~~~a~~l~~~L~~~g 360 (369)
..+..+++.+.|.+.|
T Consensus 275 ~~~~~~~~~~~L~~~g 290 (357)
T TIGR03539 275 YAARRAQLKPALEKAG 290 (357)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 6677788888888866
No 249
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.64 E-value=4.4e-14 Score=138.44 Aligned_cols=254 Identities=10% Similarity=-0.024 Sum_probs=159.9
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
..-..+|.+.+++.++++........+ .+......++.+.+++++|.+. .++.++|++||..++..+...
T Consensus 57 lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~-------~~~~~sG~~an~~ai~~l~~~ 129 (407)
T PRK09064 57 LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA-------ALVFTSGYVSNDATLSTLAKL 129 (407)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHHhCC
Confidence 333456788888888776532221111 1234444566667899988643 566677889998887766431
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTG 216 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG 216 (369)
..+..|+.....|.+....++..|+++..++. .|+++|++.++ +++++|+++.+++++|
T Consensus 130 -----------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G 192 (407)
T PRK09064 130 -----------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH------NDVAHLEELLAAADPDRPKLIAFESVYSMDG 192 (407)
T ss_pred -----------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCc
Confidence 01345555666788887888887877655543 26777887775 4678999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccc-cccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
.+.|+++|.++|+++ ++++++|+||+.+.+ +.-.. ...... ....|.++.+..|.++. .| |+++.++ +
T Consensus 193 ~~~~l~~i~~l~~~~------~~~livDEa~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~-~G-G~~~~~~-~ 262 (407)
T PRK09064 193 DIAPIAEICDLADKY------NALTYLDEVHAVGMYGPRGGG-IAERDGLMDRIDIIEGTLAKAFGV-MG-GYIAGSA-A 262 (407)
T ss_pred cccCHHHHHHHHHHc------CCEEEEECCCcccccCCCCCC-hHHhcCCCCCCeEEEEecchhhhc-cC-ceEecCH-H
Confidence 999999999999999 999999999974432 10000 000011 13468887789998854 34 6666532 2
Q ss_pred Cccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.. ..+.. ...|. + ..+.+....+++..+++.+...+.. + +..++.+++++.|++.|+
T Consensus 263 ~~-~~l~~~~~~~~------~--t~~~~~~~~~aa~~al~~~~~~~~~-~~~~~~~~~~l~~~L~~~g~ 321 (407)
T PRK09064 263 LV-DAVRSYAPGFI------F--TTSLPPAIAAAALASIRHLKESNEE-RERHQERAAKLKAALDAAGI 321 (407)
T ss_pred HH-HHHHHhCcccc------c--cCcCCHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHcCC
Confidence 22 22111 11111 1 1122222345555777776554322 3 788999999999998774
No 250
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.64 E-value=3.4e-14 Score=136.98 Aligned_cols=242 Identities=13% Similarity=0.025 Sum_probs=157.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
++++.+.+++.+++.. ...|. .++..+|+++ +++.+++++ .++++|+|+++++.+++.++..
T Consensus 35 ~~~~~~~~a~~~~~~~-~~~Y~-~~~~~~Lr~a----ia~~~~v~~-----~~I~it~G~~~~i~~~~~~l~~------- 96 (360)
T PRK07392 35 GPPESVIAAIQSALSA-LRHYP-DPDYRELRLA----LAQHHQLPP-----EWILPGNGAAELLTWAGRELAQ------- 96 (360)
T ss_pred CCCHHHHHHHHHHHHH-hhcCC-CcCHHHHHHH----HHHHhCcCh-----hhEEECCCHHHHHHHHHHHhCC-------
Confidence 3456777777766654 22332 2344556555 566667775 3489999999999888776421
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCcc----ccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~----~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~ 222 (369)
++.|++++|+|..+...++.+|++++.+|+++++. ..+++++++.. +++++++++.|+||||.+.+.+
T Consensus 97 -------g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~ 168 (360)
T PRK07392 97 -------LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSRE 168 (360)
T ss_pred -------CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHH
Confidence 35899999999999999999999999999975422 35677776654 4678999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CC-CCcEE-EEcCccCCC-CCCCeEEEEEeCCCCccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP-LVKSI-NVSGHKYGL-VYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~-~~Dsi-~~~~hK~l~-~p~g~g~l~~~~~~~~~~ 298 (369)
+|.++++++ ++ +++|++|..+..+ ........ .. .-..+ ..+.-|.++ ....+|+++..+ +.+ +
T Consensus 169 ~l~~l~~~~------~~-~IiDE~y~~~~~~---~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-~~~-~ 236 (360)
T PRK07392 169 AILPLLEQF------AL-VVVDEAFMDFLPP---DAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRL-Q 236 (360)
T ss_pred HHHHHHHHC------CE-EEEECchhhhccC---ccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-HHH-H
Confidence 999999988 85 6669999875431 11000011 11 11233 346789886 778999998743 222 2
Q ss_pred ccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH---HhhHHHHHHHHHHHhcC
Q 017569 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF---CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 299 ~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~---~~~~~a~~l~~~L~~~g 360 (369)
.+.. +.. .+ + ...+.++++...+....+.+. ...+..+++.+.|++.+
T Consensus 237 ~~~~---~~~----~~----~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 287 (360)
T PRK07392 237 RWQQ---WRD----PW----P---VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLP 287 (360)
T ss_pred HHHh---hCC----CC----C---CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2211 000 01 1 124555555555544444443 45566677888887753
No 251
>PRK07049 methionine gamma-lyase; Validated
Probab=99.64 E-value=1.7e-14 Score=141.77 Aligned_cols=227 Identities=14% Similarity=-0.021 Sum_probs=155.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
.|....||+. ++++.|.+. .++++||+.|+..++.++.++ ++.|+++.+.|..+..
T Consensus 82 ~Pt~~~Le~~----lA~leg~~~-------~iv~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~p~Y~~~~~ 137 (427)
T PRK07049 82 HPNSEIVEDR----LAVYEGAES-------AALFSSGMSAIATTLLAFVRP-------------GDVILHSQPLYGGTET 137 (427)
T ss_pred CcCHHHHHHH----HHHHhCCCc-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHH
Confidence 3556667666 888888764 789999999998888877653 4789999999988765
Q ss_pred HH----hhhcceeEEEeccCCccccCHHHHHHHHh-----hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVD-----ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-----~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
.+ ..+|++++.++. ..|.+++++++. +++++|++++|+||||.+-|+++|.+++++.++.+..+++
T Consensus 138 ~~~~~l~~~Gi~~v~~~~-----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~ 212 (427)
T PRK07049 138 LLAKTFRNFGVGAVGFAD-----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPI 212 (427)
T ss_pred HHHHHHHhcCcEEEEEeC-----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCE
Confidence 53 456887655651 246777877774 4689999999999999999999999999882111111899
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC--CCeEEEEEeCCCCcccccccccCccCCCCCCccccC
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p--~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~ 318 (369)
+++|++|..... .. +. ..++|.+..|..|++++. ...|+++. +++.. +.+.......+
T Consensus 213 vvvDety~~~~~--~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~-~~l~~~~~~~g---------- 272 (427)
T PRK07049 213 IACDNTLLGPVF--QK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLG-RKALI-RQVRALRSAIG---------- 272 (427)
T ss_pred EEEECCcccccc--CC---cc---ccCCCEEEEcCceeecCCCCcEEEEEEC-CHHHH-HHHHHHHHhcC----------
Confidence 999999865332 11 11 226799999999999853 45677764 33222 22211000111
Q ss_pred CcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 319 SKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 319 tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
.+.....+|..++.+..-..+..+..++++.+++.|++.+.+++-+|
T Consensus 273 --~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~y 319 (427)
T PRK07049 273 --TQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHY 319 (427)
T ss_pred --CCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 12346778888887754322211789999999999999988877554
No 252
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.63 E-value=6e-14 Score=137.46 Aligned_cols=251 Identities=10% Similarity=-0.056 Sum_probs=160.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|.+.+++.++++........+ .+......++.+.+++++|.+. .+++++|++||..++.++...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~SG~~An~~ai~~l~~~--- 128 (406)
T PRK13393 59 GQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA-------ALLFTSGYVSNWAALSTLGSR--- 128 (406)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhhcC---
Confidence 346888888888876533222111 1233455566677999998753 677777788998888865321
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcccCC
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (369)
..+..|++....|.++..+++..|.+++.++.. |++++++.+. +++++|++..+++++|.+.
T Consensus 129 --------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 129 --------LPGCVILSDELNHASMIEGIRHSRAEKRIFRHN------DPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred --------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCCC------CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 013467777889999988888888877766532 5666776664 3567889999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccc-cccCCCc-cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~-~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
|+++|.++|+++ ++++++|++|+.+.+ +.-..-. .... ...+|.+..+.-|.++.+. |+++.+ ++..
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~g~~g~~G~g~~~~~~~-~~~~~i~~~tlsKa~g~~G--G~~~~~-~~~~- 263 (406)
T PRK13393 195 PIAEICDVAEKH------GAMTYLDEVHAVGLYGPRGGGIAEREGL-ADRLTIIEGTLAKAFGVMG--GYITGS-AALC- 263 (406)
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccccCCCCCchhhhcCC-CCCCeEEEEeCchhhcccC--ceeeCC-HHHH-
Confidence 999999999999 999999999985443 1100000 0111 2346777678899986533 566542 2221
Q ss_pred ccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 298 DELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 298 ~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
..+.. ...|. ..++.+.....++.++|+.+...+. .. +..++.+++++.|++.|+
T Consensus 264 ~~l~~~~~~~~--------~t~~~~p~~~aa~~aaL~~~~~~~~-~~~~~~~~~~~l~~~L~~~g~ 320 (406)
T PRK13393 264 DFIRSFASGFI--------FTTSLPPAVAAGALASVRHLKASSA-ERERHQDRVARLRARLDKAGI 320 (406)
T ss_pred HHHHHhCcCce--------ecCccCHHHHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 11111 01111 1123333334556677776644443 33 778889999999998764
No 253
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=4e-14 Score=135.17 Aligned_cols=193 Identities=17% Similarity=0.076 Sum_probs=134.0
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|....+. ++++.+.+.+.+++..+..+....++..+|++++.+++.+. +.++ ..+++|+|+++++.+++.+
T Consensus 22 i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~-~~~~-----~~i~it~Ga~~~i~~~~~~ 95 (335)
T PRK14808 22 TYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTD-FLSK-----NNVSVGNGADEIIYVMMLM 95 (335)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCC-CCCc-----ceEEEcCCHHHHHHHHHHH
Confidence 344444443 34577888887766543222112346777777766655543 2544 3589999999999888776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+ +.|++++|+|..+..+++..|++++.+|++++ +.++... + ++++++++++|+||||
T Consensus 96 ~-----------------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~----~-~~~~~i~i~nP~NPTG 152 (335)
T PRK14808 96 F-----------------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVN----V-GEGDVVFIPNPNNPTG 152 (335)
T ss_pred h-----------------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc-CCCChhH----c-cCCCEEEEeCCCCCCC
Confidence 4 25889999999999999999999999999864 6665432 2 3568999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
.+-+.+++.+++ ++ ++|+++|++|..+.. ......+. ... =.++.+..|.++ ....+|+++..
T Consensus 153 ~~~s~~~l~~l~-~~------~~~ii~DE~Y~~f~~----~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~ 217 (335)
T PRK14808 153 HVFEREEIERIL-KT------GAFVALDEAYYEFHG----ESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSS 217 (335)
T ss_pred CCcCHHHHHHHH-hc------CCEEEEECchhhhcC----CchHHHHHhCCC-EEEEEechhhccCcccceEEEEeC
Confidence 999999999998 57 899999999986421 10000011 111 123345788877 67889999874
No 254
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.62 E-value=2e-14 Score=137.00 Aligned_cols=209 Identities=15% Similarity=-0.004 Sum_probs=143.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
++++++++++|.++ ...++|+|+++++..+..+ .. .+ .|++++++|..+...++..|+++
T Consensus 51 ~lr~~la~~~~~~~-----~~i~~t~G~~~~i~~~~~~-l~-------------~g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 51 ELRAAAAAYYGLPA-----ASVLPVNGAQEAIYLLPRL-LA-------------PG-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HHHHHHHHHhCCCh-----hhEEECCCHHHHHHHHHHH-hC-------------CC-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 44555777888764 2488999999998775433 22 13 68899999999999999999998
Q ss_pred EEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
+.++ |++++++++ +++++|+++.|+||||.+.+ +++|+++|+++ ++++++|++|..+...
T Consensus 111 ~~~~--------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~-- 173 (330)
T TIGR01140 111 VELP--------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRAR------GGWLVVDEAFIDFTPD-- 173 (330)
T ss_pred EEeC--------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc------CCEEEEECcccccCCc--
Confidence 8876 688899888 45778999999999999977 66778888899 9999999999865431
Q ss_pred CCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHH
Q 017569 256 YPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 256 ~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~ 333 (369)
+. ...+ ....-+.+..+.+|+++ ...++|+++.++. .. ..+.. +.. .+ + ...+.+.++.+
T Consensus 174 -~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~~---~~~----~~----~---~s~~~q~~~~~ 235 (330)
T TIGR01140 174 -AS-LAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLRE---ALG----PW----T---VNGPARAAGRA 235 (330)
T ss_pred -cc-hhhHhccCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHHh---cCC----CC----C---chHHHHHHHHH
Confidence 11 0111 11233567778999986 3466799987542 22 22211 100 11 1 12344555555
Q ss_pred HhcHhhH-HHH--HhhHHHHHHHHHHHhcCCC
Q 017569 334 RLGFEVI-PSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 334 ~lg~~G~-~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
.+...++ +.. +..++.+++.+.|++.+.+
T Consensus 236 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 267 (330)
T TIGR01140 236 ALADTAWQAATRARLAAERARLAALLARLGGL 267 (330)
T ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5654454 333 7888888999999988754
No 255
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.62 E-value=1.2e-14 Score=148.14 Aligned_cols=227 Identities=12% Similarity=-0.047 Sum_probs=163.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-Hhhhcc
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEV 176 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~-~~~~G~ 176 (369)
.+..+..|++||++.. -.+++|+|.+|..++.++..+ ++.|+++.+.|-|+..+ +.+.|+
T Consensus 177 ~eAq~~AA~~fgAd~t------yFlvNGTS~gn~a~i~a~~~~-------------Gd~VLvdRN~HKSv~hgaLiLsGa 237 (720)
T PRK13578 177 KDAQKHAAKVFNADKT------YFVLNGTSASNKVVTNALLTP-------------GDLVLFDRNNHKSNHHGALIQAGA 237 (720)
T ss_pred HHHHHHHHHHhCCCce------EEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHHcCC
Confidence 4566779999999963 688889999999888887653 57999999999999995 889999
Q ss_pred eeEEEeccCCc----cccCH-----HHHHHHHhhc----------CcEEEEeeCCCCcccCCCHHHHHHH-HHHhhhccC
Q 017569 177 ELKEVKLEEGY----YVMNP-----VKAVELVDEN----------TICVAAILGSTLTGEFEDVKLLHDL-LTKKNEETG 236 (369)
Q Consensus 177 ~v~~v~~~~~~----~~~d~-----~~L~~~i~~~----------~~~v~~~~~~~~tG~~~~l~~I~~l-~~~~~~~~~ 236 (369)
.+++++...+. +.+++ +.|+++|.+. .+++++++||.. |.+-|+++|.++ ++.+
T Consensus 238 ~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYd-G~~ydi~~I~~~~~h~~----- 311 (720)
T PRK13578 238 TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYD-GTIYNARQVVDKIGHLC----- 311 (720)
T ss_pred eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCc-ceeecHHHHHHHhhccC-----
Confidence 99998764321 24454 4499888764 378888888655 999999999998 6777
Q ss_pred CCceEEeecccccccccccCCC---c-cccccCCCCc----EEEEcCccCCCCCCCeEEEEEeCCCCcc-------cccc
Q 017569 237 WDTPIHVDAASGGFIAPFLYPD---L-EWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTKDDLP-------DELV 301 (369)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~---~-~~~~~~~~~D----si~~~~hK~l~~p~g~g~l~~~~~~~~~-------~~~~ 301 (369)
+ ++|||+|+|++.. +.|. . +... ..++| .++-|.||.+.+-..++++.+++..... ..+.
T Consensus 312 -~-~llvDEAhgah~~--F~p~~~~~p~~al-~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~ 386 (720)
T PRK13578 312 -D-YILFDSAWVGYEQ--FIPMMADCSPLLL-ELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLN 386 (720)
T ss_pred -C-cEEEeCcchhhhc--cCcccccCChhhh-hcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHH
Confidence 7 9999999998764 3332 1 1112 34888 9999999999888888888886642110 0110
Q ss_pred cccCccCCCCCCccccCCcchhHHHHHHHHHHHh-cHhhHHHH-HhhHHHHHHHHHH-HhcCCC
Q 017569 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEVIPSF-CCVDHKKLSSFFV-IHSSYF 362 (369)
Q Consensus 302 ~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l-g~~G~~~~-~~~~~a~~l~~~L-~~~g~~ 362 (369)
....... .-|.+....+++-.+-+.+ +..|...+ ++++.+..+|++| +....|
T Consensus 387 ~al~m~q--------STSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~ 442 (720)
T PRK13578 387 NAFMLHA--------STSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLI 442 (720)
T ss_pred HHHHHHc--------CCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 0001111 1244455566666666666 44677777 9999999999999 665554
No 256
>PLN02483 serine palmitoyltransferase
Probab=99.61 E-value=8.8e-14 Score=139.02 Aligned_cols=224 Identities=12% Similarity=-0.000 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh
Q 017569 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (369)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~ 173 (369)
.....++++.+++++|.+. .++.++|..++..++.++..+ ++.|+++++.|.++...++.
T Consensus 145 ~~~~~ele~~lA~~~g~~~-------ai~~~~G~~an~~~i~al~~~-------------Gd~Vi~d~~~h~s~~~~~~~ 204 (489)
T PLN02483 145 TKLHRELEELVARFVGKPA-------AIVFGMGYATNSTIIPALIGK-------------GGLIISDSLNHNSIVNGARG 204 (489)
T ss_pred cHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC-------------CCEEEEcchhhHHHHHHHHH
Confidence 3444455566999999764 455556677787666665432 47899999999999999999
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHh-------hcC-----c-EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVD-------ENT-----I-CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~~-----~-~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
.|++++.++.+ |+++|++.++ +++ + +|++....+++|.+.++++|.++|+++ +++
T Consensus 205 ~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~------~~~ 272 (489)
T PLN02483 205 SGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY------KAY 272 (489)
T ss_pred cCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHc------CCE
Confidence 99999999854 3455555443 222 4 444444558899999999999999999 999
Q ss_pred EEeecccccccccccCCCc--cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc-cCccCCCCCCcccc
Q 017569 241 IHVDAASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLN 317 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~--~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~ 317 (369)
+++|+||+.+......... ...+....+|.+..+.+|.+++ .| |+++.+ ++.+ ..+... ..+. + .
T Consensus 273 livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~G-G~i~~~-~~li-~~l~~~~~~~~------~--~ 340 (489)
T PLN02483 273 VYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CG-GYIAGS-KELI-QYLKRTCPAHL------Y--A 340 (489)
T ss_pred EEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-Cc-eEEEcC-HHHH-HHHHHhCcccc------c--c
Confidence 9999999754321000000 0122223678888999999854 44 777653 3232 222111 1111 0 0
Q ss_pred CCcchhHHHHHHHHHHHh-cHh----hHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 318 FSKGSSQIIAQYYQFIRL-GFE----VIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 318 ~tr~~~~~l~~~~~l~~l-g~~----G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
++.+......+.++|+.+ +.+ +.+.+ +..++.++|++.|+++|+
T Consensus 341 ~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~ 390 (489)
T PLN02483 341 TSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF 390 (489)
T ss_pred CCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC
Confidence 111122222333455544 222 22334 888999999999999875
No 257
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.61 E-value=1.4e-13 Score=134.76 Aligned_cols=203 Identities=12% Similarity=0.040 Sum_probs=139.8
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhccC-----CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~n-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
+.++|+...+.. +++.+.+++.+++... ...|...++..++++++++++.+. ++++ ..+++|+|++++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~-----d~I~it~Ga~~a 107 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDP-----EEIFISDGAKCD 107 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCH-----HHEEECCCcHHH
Confidence 345666666553 3566778777766532 233445568888998877765332 4554 348999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcc-----------eeEEEeccC-CccccCHHHHHH
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV-----------ELKEVKLEE-GYYVMNPVKAVE 197 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~-----------~v~~v~~~~-~~~~~d~~~L~~ 197 (369)
+... ..+.. .+++|+++.|+|..+...++..|+ .++.+|+++ +++.+|+++
T Consensus 108 l~~l-~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--- 170 (402)
T TIGR03542 108 VFRL-QSLFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE--- 170 (402)
T ss_pred HHHH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---
Confidence 9764 33322 146899999999999999999999 888899864 335555422
Q ss_pred HHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCC---cE
Q 017569 198 LVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLV---KS 270 (369)
Q Consensus 198 ~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~---Ds 270 (369)
.+++++|+++.|+||||.+-+ +++|+++|+++ ++++++|++|..+.. .+.....+. .... -.
T Consensus 171 --~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~y~~~~~---~~~~~~~~~~~~~~~~~vi 239 (402)
T TIGR03542 171 --EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH------GSLILFDAAYSAFIS---DPSLPHSIFEIPGAKECAI 239 (402)
T ss_pred --cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEEchhhhhcc---CCCCCcchhhCCCCcccEE
Confidence 156889999999999999965 88899999999 999999999987543 111111111 1111 12
Q ss_pred EEEcCccCC-CCCCCeEEEEEeC
Q 017569 271 INVSGHKYG-LVYAGVGWVVWRT 292 (369)
Q Consensus 271 i~~~~hK~l-~~p~g~g~l~~~~ 292 (369)
.+.+.-|.+ ....+.|++++.+
T Consensus 240 ~~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 240 EFRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred EEecCccccCCCCcceEEEEecH
Confidence 245678987 4678899998743
No 258
>PLN02822 serine palmitoyltransferase
Probab=99.61 E-value=5.5e-14 Score=140.19 Aligned_cols=268 Identities=13% Similarity=-0.001 Sum_probs=164.7
Q ss_pred CCCCcccccccc-C-CChHHHHHHHHHHhccCCCCCCC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 54 GNPRLNLASFVT-T-WMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 54 ~~p~~~l~~~~~-~-~~~~~v~~~~~~~~~~n~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
++..+||+++.. + ..++.+.+++.++++.....+.. +-+......++++.+++++|.+. ..++++|++
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~------~i~~s~G~~- 180 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD------SILYSYGLS- 180 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC------EEEECCHHH-
Confidence 444456654422 2 24678889888888764333222 12344555566666999998763 266666655
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHh--hcC-c
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENT-I 204 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~~-~ 204 (369)
++..++.++.++ ++.|++....|+++..++.+.|.+++.++.++ +.+..+++++++... +++ +
T Consensus 181 a~~sai~a~~~~-------------gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~ 247 (481)
T PLN02822 181 TIFSVIPAFCKK-------------GDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRR 247 (481)
T ss_pred HHHHHHHHhCCC-------------CCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcE
Confidence 676776665432 46888999999999999999999998888753 224444444443321 334 6
Q ss_pred EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCC--ccccccCCCCcEEEEcCccCCCCC
Q 017569 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD--LEWDFRLPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~--~~~~~~~~~~Dsi~~~~hK~l~~p 282 (369)
+|++....+++|.+.|+++|.++|++| ++++++|++|+.+.+.-.... ..+.+....+|.++.+..|.++ .
T Consensus 248 ~Ivve~i~~~~G~i~~L~~i~~l~~k~------~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~ 320 (481)
T PLN02822 248 YIVVEAIYQNSGQIAPLDEIVRLKEKY------RFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-T 320 (481)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-h
Confidence 888889999999999999999999999 999999999985543100000 0111212357899999999985 3
Q ss_pred CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhc
Q 017569 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~ 359 (369)
.| |+++.+ ++.. +.+.. .. ..++..++.+.....+.-.+|+.+.. .-+.+ +..++.++|++.|++.
T Consensus 321 ~G-G~i~g~-~~ii-~~~~~----~~---~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 321 EG-GFCTGS-ARVV-DHQRL----SS---SGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred CC-eEEEcC-HHHH-HHHHh----cC---CceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhc
Confidence 33 666653 2222 22111 01 11121122222222223245554432 11222 8999999999999986
No 259
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.61 E-value=9e-15 Score=130.87 Aligned_cols=248 Identities=16% Similarity=0.115 Sum_probs=164.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
-|..++++++.++.-... -|+..|-+.+||++ .++++|-+. +.|+++||++|++++++.+..
T Consensus 33 ~PTdeMr~am~eA~vgDd-VyGeD~tt~rLE~~----vA~l~GKEA-------gLFv~SGTmgNllaIm~Hc~~------ 94 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVGDD-VYGEDPTTNRLEQR----VAELFGKEA-------GLFVPSGTMGNLLAIMVHCHQ------ 94 (384)
T ss_pred CChHHHHHHHhhcccCcc-cccCCccHHHHHHH----HHHHhCccc-------eeeecccccccHHHHHHHhcC------
Confidence 344667777766643222 24566788999988 888999986 899999999999999998763
Q ss_pred hcCCCCCCCeEEecCCCcchHHHH---HhhhcceeEEEeccCCccccCHHHHHHHHhh--------cCcEEEEeeCCCCc
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------NTICVAAILGSTLT 215 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--------~~~~v~~~~~~~~t 215 (369)
.+-+||+.+..|.-..+. ..+.|+.++.|...+| +.||++++|++|.. -|++|.+..-.+.+
T Consensus 95 ------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d-gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 95 ------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND-GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ------CCceEEeccchheeehhccChhhhccceeEeeeeCCC-CeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 135899999999654433 3455777888876665 89999999999973 26888888888888
Q ss_pred c-cCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 216 G-EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 216 G-~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
| .+-| +++|.++|+++ ++.+|.|||--+-.. ..-..+..--...+||+++...|-+++|.|+ ++ +.
T Consensus 168 Gg~vlPle~~~~v~~lak~~------glkLH~DGARi~NAa--vasgV~vk~i~~~fDSVsiCLSKglgAPVGS-Vi-VG 237 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRH------GLKLHMDGARIFNAA--VASGVPVKKICSAFDSVSICLSKGLGAPVGS-VI-VG 237 (384)
T ss_pred CceEeeHHHHHHHHHHHhcc------CCeeecchhhhhhHH--HHcCCCHHHHHHhhhhhhhhhhccCCCCccc-EE-Ec
Confidence 8 6656 45677889999 999999998322111 0011111111447899999999999999985 44 45
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
+++++.++-.....+ ++ |-|... .++. ++|-.+ .+.+..+ +.++.|+.+++.++..+-
T Consensus 238 ~k~FI~kA~~~RKal-GG--------GmRQsG-vLaa-aaLval-~~~~~~L~~dHk~A~~lAe~~~~~~~ 296 (384)
T KOG1368|consen 238 SKDFIDKARHFRKAL-GG--------GMRQSG-VLAA-AALVAL-DENVPLLRADHKRAKELAEYINTPEE 296 (384)
T ss_pred cHHHHHHHHHHHHHh-cC--------chhHHH-HHHH-HHHHHh-hcchHHHHHHHHHHHHHHHHhccccc
Confidence 554443321111111 22 222221 2222 333333 2345556 788888888888887663
No 260
>PRK08637 hypothetical protein; Provisional
Probab=99.60 E-value=3.4e-14 Score=138.38 Aligned_cols=200 Identities=10% Similarity=0.013 Sum_probs=137.0
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+.+.+++.+........|....|..++++++.+++.+..+ .+++ +...+++|+|+++++.+++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~~I~it~G~~~al~~~~~~l~~~-------- 92 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGK--KMSLPIVTNALTHGLSLVADLFVDQ-------- 92 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcccccc--ccceeeEccchHHHHHHHHHHhcCC--------
Confidence 3344444433223455666667888999888887776542 2211 1124789999999999888877542
Q ss_pred CCCCCCCeEEecCCCcchHHHHH-hhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcccCC---C
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE---D 220 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~-~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~---~ 220 (369)
++.|+++.|+|+.+...+ ...|++++.+|+..+++.+|+++++++++ +.++++++++|+||||.+- .
T Consensus 93 -----gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~ 167 (388)
T PRK08637 93 -----GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE 167 (388)
T ss_pred -----CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH
Confidence 478999999999998875 46799999999842236789999999887 4456677888999999884 4
Q ss_pred HHHHHHHHHH-----hhhccCCCceEEeecccccccccccCCCc-cc--cc-c-CCCCcEEEE-cCcc-CCCCCCCeEEE
Q 017569 221 VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDL-EW--DF-R-LPLVKSINV-SGHK-YGLVYAGVGWV 288 (369)
Q Consensus 221 l~~I~~l~~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~--~~-~-~~~~Dsi~~-~~hK-~l~~p~g~g~l 288 (369)
+++|+++|++ + ++++++|.+|..+.. -.... +. .+ . ..++..+.+ ++.| ++.....+|++
T Consensus 168 ~~~l~~~~~~~~~~~~------~~~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 168 ATAIVEAIKELADAGT------KVVAVVDDAYFGLFY--EDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred HHHHHHHHHHHHhcCC------cEEEEecccchhccc--CCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence 6777777765 6 999999999987543 11111 10 11 1 113323332 5555 67788999999
Q ss_pred EEeC
Q 017569 289 VWRT 292 (369)
Q Consensus 289 ~~~~ 292 (369)
++.+
T Consensus 240 ~~~~ 243 (388)
T PRK08637 240 TFGT 243 (388)
T ss_pred EEcc
Confidence 8753
No 261
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.60 E-value=8.9e-14 Score=135.49 Aligned_cols=245 Identities=12% Similarity=0.019 Sum_probs=152.2
Q ss_pred CChHHHHHHHHHHhccCCCC-------CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD-------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~-------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
..+|.+.+++.+++++...+ |.......+|| +.+++++|.+. .++.++|+.++..++.++.+
T Consensus 12 ~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-------al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 12 SSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-------AILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-------EEEecCcHHHHHHHHHHhCC
Confidence 34577788777777652222 22223334444 45999999874 57777778888777777543
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-----------hcCcEEEE
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-----------ENTICVAA 208 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-----------~~~~~v~~ 208 (369)
+ ++.|++++..|.++...+.+.++++++++... .-|++.+.+.+. +++++|++
T Consensus 81 ~-------------GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d---~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 81 R-------------GDLLVVDRGVNEALLVGVSLSRANVRWFRHND---MKDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred C-------------CCEEEEeccccHHHHHHHHHcCCeEEEeCCCC---HHHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 2 57999999999999988888788777776542 113444444443 25788999
Q ss_pred eeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccc----ccCCCcccccc-CCCCcEEEEcCccCCCCCC
Q 017569 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP----FLYPDLEWDFR-LPLVKSINVSGHKYGLVYA 283 (369)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~----~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~ 283 (369)
..+.+++|.+.|+++|.++|+++ ++++++|++++.+... +... .+.+. ..++|.++.+.+|.++ |.
T Consensus 145 E~v~~~~G~i~~l~~i~~l~~~~------g~~livDe~~~~g~~g~~G~g~~~--~~g~~p~~~~Div~~slsk~~g-~~ 215 (392)
T PLN03227 145 EGLYKNTGTLAPLKELVALKEEF------HYRLILDESFSFGTLGKSGRGSLE--HAGLKPMVHAEIVTFSLENAFG-SV 215 (392)
T ss_pred cCCcCCCCcccCHHHHHHHHHHc------CCEEEEECcccccccCCCCCcHHH--HcCCCCCCCceEEEeechhhhh-cc
Confidence 99999999999999999999999 9999999999743321 0000 11122 3478999999999864 44
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh-c-HhhHHHH-HhhHHHHHHHHHHHhcC
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-G-FEVIPSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l-g-~~G~~~~-~~~~~a~~l~~~L~~~g 360 (369)
| |+++.++ +.. ..+.. + +. ..+..++-+ ++.+|+++..+ . .+.-..+ +..++.++|+++|++.+
T Consensus 216 g-g~v~~~~-~~~-~~~~~---~-~~---~~~~~~~~~---p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~ 282 (392)
T PLN03227 216 G-GMTVGSE-EVV-DHQRL---S-GS---GYCFSASAP---PFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSS 282 (392)
T ss_pred C-cEEecCH-HHH-HHHHH---h-Cc---CccccCCCC---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3 5555432 221 11110 0 11 111112211 22333333222 1 1122223 88999999999998754
No 262
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.60 E-value=1.9e-13 Score=134.37 Aligned_cols=213 Identities=16% Similarity=0.120 Sum_probs=142.9
Q ss_pred CccccccccCCC---hHHHHHHHHHHhccC-----CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 57 RLNLASFVTTWM---EPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 57 ~~~l~~~~~~~~---~~~v~~~~~~~~~~n-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
.++|+.+.|... ...+.+++.+.++.. ...|....+..+|++++.+|+.+.+|.+.+. ..+++|+|+++
T Consensus 32 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~---~~I~it~Ga~~ 108 (416)
T PRK09440 32 AIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP---QNIALTNGSQS 108 (416)
T ss_pred ceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccChHH
Confidence 356666655422 235677777766542 1345555678899999999999888876432 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-cCCCcchHHHHHhhhc----ceeEEEeccCC--ccccCHHHHHHHHhh
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE----VELKEVKLEEG--YYVMNPVKAVELVDE 201 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G----~~v~~v~~~~~--~~~~d~~~L~~~i~~ 201 (369)
++.+++.++.+. +.+..++.|++ ..|+|+.+...+...| ..+..++++.+ ++.+|+++|+ +.+
T Consensus 109 al~~~~~~l~~~--------~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~ 178 (416)
T PRK09440 109 AFFYLFNLFAGR--------RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE 178 (416)
T ss_pred HHHHHHHHHhcc--------ccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC
Confidence 998888877541 11112468988 5999998887665433 33344455432 3689999997 466
Q ss_pred cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccC
Q 017569 202 NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY 278 (369)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~ 278 (369)
++++++++.|+||||.+.+ +++|+++|+++ ++++++|.+|+............... ..++ .+..+..|.
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~~~~~~~~~~~-~~~v-I~~~SfSK~ 250 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQH------NIPLLIDNAYGPPFPGIIFSEATPLW-NPNI-ILCMSLSKL 250 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHc------CCcEEEeCCccccCCCcchhhcCccc-cCCe-EEEeccccc
Confidence 7889999999999999955 77888999999 99999999997422100000000000 1111 233468898
Q ss_pred CCCCCCeEEEEE
Q 017569 279 GLVYAGVGWVVW 290 (369)
Q Consensus 279 l~~p~g~g~l~~ 290 (369)
+.....+|+++.
T Consensus 251 ~~pGlRiG~~i~ 262 (416)
T PRK09440 251 GLPGVRCGIVIA 262 (416)
T ss_pred CCCcceEEEEeC
Confidence 878889999876
No 263
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=7.6e-14 Score=134.77 Aligned_cols=168 Identities=19% Similarity=0.103 Sum_probs=123.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
++++.+++++|+++ ..+++|+|+++++.+++.++..+ | +++|++++++|..+...++..|+++
T Consensus 63 ~lr~~ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~~~~--------g----~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 63 GLRSALAALYGCAP-----EQLLIGRGSDEAIDLLVRALCVP--------G----RDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred HHHHHHHHHhCcCh-----HHEEEeCCHHHHHHHHHHHhcCC--------C----CCeEEEcCCChHHHHHHHHHcCCEE
Confidence 34444777788875 34899999999999888877442 1 2579999999988888889999999
Q ss_pred EEEecc--CCccccCHHHHHHHH-hhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 179 KEVKLE--EGYYVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 179 ~~v~~~--~~~~~~d~~~L~~~i-~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
+.+|++ ++++.+|++++++++ .+++++|++++|+||||.+.+.+++.++++...+ ++++++|++|+.+..
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~----~~~iI~Deay~~f~~--- 198 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG----KALVVVDEAYGEFSD--- 198 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC----CcEEEEeCcchhhcC---
Confidence 999984 234678999986554 6788999999999999999999999998886411 789999999987542
Q ss_pred CCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 256 YPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 256 ~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
.+....... ..++ .+.-+.-|.++ .....|+++..
T Consensus 199 ~~~~~~~~~~~~~v-i~~~SfSK~~gl~GlRvGy~v~~ 235 (364)
T PRK04781 199 VPSAVGLLARYDNL-AVLRTLSKAHALAAARIGSLIAN 235 (364)
T ss_pred CcchHHHHhhCCCE-EEEecChhhcccccceeeeeeCC
Confidence 111000011 1122 33455789775 67899999863
No 264
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.58 E-value=4.4e-13 Score=139.29 Aligned_cols=302 Identities=12% Similarity=-0.036 Sum_probs=187.7
Q ss_pred ccccccc-cchhHhhhCC-CCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccccc-cCCChHHHHHHHHH---Hhcc-CC
Q 017569 12 EILSSTF-ASRYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFV-TTWMEPECDKLVMA---SINK-NY 84 (369)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~-~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~~-~~~~~~~v~~~~~~---~~~~-n~ 84 (369)
++|+++| ...|..-++. .+++|+ +.++.++++.++++-..|...+.-++.+. .+..|+.+.+-+.+ .+.. .+
T Consensus 35 ~s~d~l~~~~iP~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTP 113 (954)
T PRK12566 35 ASRAELIEQTVPPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTP 113 (954)
T ss_pred cCHHHHhhccCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCC
Confidence 4566777 5555322333 245665 58999999999988766544332133332 23344555344332 2322 35
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch---HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC
Q 017569 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS---EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA 161 (369)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt---~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~ 161 (369)
++++.++|.-+...+.+.++++|.|++.. +...--++| ||+.++.+..+. ++.+|++++
T Consensus 114 YQpEisQG~Lqal~e~Qtmi~~LtGm~va-----NASl~D~atA~aEA~~ma~~~~~~-------------k~~~~~v~~ 175 (954)
T PRK12566 114 YQPEIAQGRLEALLNFQQMTIDLTGLDLA-----NASLLDEATAAAEAMALAKRVAKS-------------KSNRFFVDE 175 (954)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHhCchhh-----hhhhccchhHHHHHHHHHHHHhhc-------------CCCEEEECC
Confidence 55566778777778899999999999962 233444544 444443322111 135899999
Q ss_pred CCcchHHHHHh----hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCC
Q 017569 162 NVQVCWEKFAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 162 ~~h~s~~~~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~ 237 (369)
..|+.+...++ .+|++++. +++++.+++++.+|++.+|++. |.+.|+++|.+++|+.
T Consensus 176 ~~hP~~~~v~~t~~~~~g~~i~~------------~~~~~~~~~~~~~v~vq~P~~~-G~i~d~~~i~~~~h~~------ 236 (954)
T PRK12566 176 HCHPQTLSVLRTRAEGFGFELVV------------DAVDNLAAHAVFGALLQYPDTH-GEIRDLRPLIDQLHGQ------ 236 (954)
T ss_pred CCCHHHHHHHHHhhhcCCcEEEE------------cchhhcCCCCEEEEEEECCCCc-eEEccHHHHHHHHHHc------
Confidence 99998776554 34555543 2344456667889999999766 9999999999999999
Q ss_pred CceEEeecccccccccccCCCccccccCCCCcEEEEcCccC----CCCCCCeEEEEEeCCCCccccccc-----ccCccC
Q 017569 238 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVF-----HINYLG 308 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~----l~~p~g~g~l~~~~~~~~~~~~~~-----~~~y~~ 308 (369)
+..++ +++--. .+..+.+ +- ..|+|.++.+++-+ +++++..|++.+|++ + .+.+.. ..+-.+
T Consensus 237 gal~~-~~~d~l-aL~ll~~--Pg---e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~-~-~R~~PGRivG~s~D~~G 307 (954)
T PRK12566 237 QALAC-VAADLL-SLLVLTP--PG---ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD-Y-KRAMPGRIIGVSRDARG 307 (954)
T ss_pred CCEEE-EEeCHH-HHhCCCC--hh---hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH-H-HhhCCCCccceeecCCC
Confidence 88755 333111 1111222 11 34899997666655 345566789998764 2 122111 011111
Q ss_pred CCCCCcc---------------ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 309 SDQPTFT---------------LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 309 ~~~~~~~---------------l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
......+ --||-.+..++..-+++.++|.+|++++ +++.+|+||++.|.+.|
T Consensus 308 ~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g 376 (954)
T PRK12566 308 NTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG 376 (954)
T ss_pred CeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1000001 1278877777777788889999999998 89999999999999988
No 265
>PRK08354 putative aminotransferase; Provisional
Probab=99.58 E-value=7.9e-14 Score=131.78 Aligned_cols=171 Identities=20% Similarity=0.179 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
++.+.+++.+++.... . +|.... +++++++.+|.+ +++|+|+++++.+.+..+. +
T Consensus 22 p~~~~~a~~~~~~~~~-~---yp~~~~----l~~~ia~~~~~~--------I~vt~G~~~al~~~~~~~~-~-------- 76 (311)
T PRK08354 22 PEWLDEMFERAKEISG-R---YTYYEW----LEEEFSKLFGEP--------IVITAGITEALYLIGILAL-R-------- 76 (311)
T ss_pred CHHHHHHHHHHHHHhh-c---CCChHH----HHHHHHHHHCCC--------EEECCCHHHHHHHHHHhhC-C--------
Confidence 4667777777664322 2 233333 455688888742 8999999999976654332 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLH 225 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~ 225 (369)
++.|+++.|+|+.+...++..|++++.++ +|++.|+++++ ++++++++.|+||||.+.+ +++|.
T Consensus 77 -----gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~ 143 (311)
T PRK08354 77 -----DRKVIIPRHTYGEYERVARFFAARIIKGP-------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLL 143 (311)
T ss_pred -----CCeEEEeCCCcHHHHHHHHHcCCEEeecC-------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHH
Confidence 47899999999999999999999886543 46888988876 5678999999999999865 66777
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEE
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~ 290 (369)
++|+++ ++|+++|++|+.+... .. ... ... -.++-+.-|.++ .....|+++.
T Consensus 144 ~~a~~~------~~~li~De~y~~f~~~---~~-~~~--~~~-vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 144 DAVEDR------NALLILDEAFIDFVKK---PE-SPE--GEN-IIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred HHhhhc------CcEEEEeCcchhcccc---cc-ccC--CCc-EEEEeccHhhcCCccceeeeeee
Confidence 788888 9999999999875431 11 111 111 123345678876 6688999886
No 266
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.57 E-value=4.1e-13 Score=131.63 Aligned_cols=256 Identities=13% Similarity=-0.069 Sum_probs=157.6
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.++++........ .+..++..++.+.+++++|.+. ....+++||++|+..++++++...
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~-----~~v~~~~sgsea~~~al~~~~~~~------ 120 (413)
T cd00610 53 NHPEVVEALKEQLAKLTHFSLG-FFYNEPAVELAELLLALTPEGL-----DKVFFVNSGTEAVEAALKLARAYT------ 120 (413)
T ss_pred CCHHHHHHHHHHHHhCcCccCc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHHHHHHHHHHHHHHc------
Confidence 4577888888877543222111 1345667778888999998543 248999999999999999887531
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHhhhc------------ceeEEEeccCC-----ccccCHHHHHHHHhh---cCcEE
Q 017569 148 QGKPYDKPNIVTGANVQVC-WEKFARYFE------------VELKEVKLEEG-----YYVMNPVKAVELVDE---NTICV 206 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s-~~~~~~~~G------------~~v~~v~~~~~-----~~~~d~~~L~~~i~~---~~~~v 206 (369)
.+++|++.++.+.. ....+...+ .+++.+|.++. ++..|+++|++.+++ ++.+|
T Consensus 121 -----~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 195 (413)
T cd00610 121 -----GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAV 195 (413)
T ss_pred -----CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEE
Confidence 13567776655443 333333222 23566666521 245689999999976 45677
Q ss_pred EEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC
Q 017569 207 AAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 207 ~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p 282 (369)
+++..++++|.+.| +++|.++|+++ ++++++|++|+++.. .......+..-...|.++++ |+++++
T Consensus 196 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~g~g~--~g~~~~~~~~~~~~d~~t~s--K~l~~g 265 (413)
T cd00610 196 IVEPIQGEGGVIVPPPGYLKALRELCRKH------GILLIADEVQTGFGR--TGKMFAFEHFGVEPDIVTLG--KGLGGG 265 (413)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhhHhhcCCCCCeEEEc--ccccCc
Confidence 77777777798776 99999999999 999999999986421 11100111111134666654 998888
Q ss_pred CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
++.|+++.++ +.. ..+. ...+. ...+ .+.+.....++.++|+.+..+.+.+ +..++.++++++|++..
T Consensus 266 ~~~g~~~~~~-~~~-~~~~-~~~~~----~~~t--~~~~~~~~~a~~a~l~~l~~~~~~~-~~~~~~~~l~~~l~~~~ 333 (413)
T cd00610 266 LPLGAVLGRE-EIM-DAFP-AGPGL----HGGT--FGGNPLACAAALAVLEVLEEEGLLE-NAAELGEYLRERLRELA 333 (413)
T ss_pred cccEEEEEcH-HHH-Hhhc-cCCCC----CCCC--CCcCHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHH
Confidence 8899988743 222 2210 00000 0011 1222223455666777775533322 77788888888887753
No 267
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.4e-13 Score=131.69 Aligned_cols=221 Identities=17% Similarity=0.071 Sum_probs=160.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--- 166 (369)
.|....||+. ++.+-|.+. ++.+++|+.|+..++.++... ++.|+.+...|..
T Consensus 62 nPT~~~lE~~----~a~LEg~~~-------~~afsSGmaAI~~~~l~ll~~-------------GD~vl~~~~~YG~t~~ 117 (396)
T COG0626 62 NPTRDALEEA----LAELEGGED-------AFAFSSGMAAISTALLALLKA-------------GDHVLLPDDLYGGTYR 117 (396)
T ss_pred CccHHHHHHH----HHHhhCCCc-------EEEecCcHHHHHHHHHHhcCC-------------CCEEEecCCccchHHH
Confidence 4566677766 788887775 889999999999888887653 4788888776554
Q ss_pred -HHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
+.+..+.+|+++.+++.. |.+++++++. ++|++|++-+|+||+..+.||.+|+++|+++ ++.++||
T Consensus 118 ~~~~~l~~~gi~~~~~d~~------~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~------g~~vvVD 185 (396)
T COG0626 118 LFEKILQKFGVEVTFVDPG------DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAY------GALVVVD 185 (396)
T ss_pred HHHHHHHhcCeEEEEECCC------ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhc------CCEEEEE
Confidence 334445568888777643 3466777777 5999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCCCCccccccccc-CccCCCCCCccccCCcc
Q 017569 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~ 321 (369)
+.++.+++ .+| . ..|+|.+.-|.-|++++.-.+ |+++.++++ +.+.+.... .+.+.
T Consensus 186 NTfatP~~--q~P---L---~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~-~~~~~~~~~~~~~G~------------ 244 (396)
T COG0626 186 NTFATPVL--QRP---L---ELGADIVVHSATKYLGGHSDVLGGVVLTPNEE-LYELLFFAQRANTGA------------ 244 (396)
T ss_pred CCcccccc--cCh---h---hcCCCEEEEeccccccCCcceeeeEEecChHH-HHHHHHHHHHhhcCC------------
Confidence 99886544 222 2 237999999999999887654 544444432 212210000 01111
Q ss_pred hhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
...+..+|..++.+..-+++-.++.++|..++++|++.+.+++-+|
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~y 290 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYY 290 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 2236777888888876666644999999999999999999887665
No 268
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.56 E-value=5.7e-14 Score=143.07 Aligned_cols=224 Identities=13% Similarity=0.034 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
.+..+..|++||++.. -.+++|+|.+|..++.++..+ ++.|+++.+.|-|+..++.+.|+.
T Consensus 198 ~eAe~~AA~~fgAd~t------yfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~haLilsga~ 258 (714)
T PRK15400 198 KEAEEYIARVFNADRS------YMVTNGTSTANKIVGMYSAPA-------------GSTVLIDRNCHKSLTHLMMMSDVT 258 (714)
T ss_pred HHHHHHHHHHhCCCcE------EEEeCchHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCe
Confidence 4566779999999963 578889999998888887553 579999999999999999999999
Q ss_pred eEEEeccCCc----cccC-----HHHHHHHHhhc-----CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 178 LKEVKLEEGY----YVMN-----PVKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 178 v~~v~~~~~~----~~~d-----~~~L~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
+++++...+. +.++ .+.++++|.+. |+.+++++| |..|.+-++++|.++|+.+ + +|+
T Consensus 259 PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~------~--ilv 329 (714)
T PRK15400 259 PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK------S--IHF 329 (714)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCC------C--EEE
Confidence 9998765321 2345 89999999763 337888888 5559999999999999877 7 799
Q ss_pred ecccccccccccCCCcc--ccccCCCC---c--EEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccc
Q 017569 244 DAASGGFIAPFLYPDLE--WDFRLPLV---K--SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL 316 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~~~~~~---D--si~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l 316 (369)
|+|+|++.. +.|..+ ..+. .++ | .++-|.||.+.+-..++++.++.. .-...+........+
T Consensus 330 DEAwgah~~--F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~m~~S------- 398 (714)
T PRK15400 330 DSAWVPYTN--FSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHTT------- 398 (714)
T ss_pred Eccchhhhc--cCcccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHHHHcC-------
Confidence 999998764 333222 1121 345 5 899999999988888888877542 111111111111111
Q ss_pred cCCcchhHHHHHHHHHHHhc-HhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 317 NFSKGSSQIIAQYYQFIRLG-FEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 317 ~~tr~~~~~l~~~~~l~~lg-~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
-|.+....+++-.+.+.+. ..|...+ ++++.+..++++|.+.+.
T Consensus 399 -TSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~ 444 (714)
T PRK15400 399 -TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (714)
T ss_pred -CCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2455555677778878774 4787777 999999999999988654
No 269
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.56 E-value=9.5e-14 Score=131.40 Aligned_cols=220 Identities=20% Similarity=0.080 Sum_probs=163.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s---- 166 (369)
|-...+|.. ++++.|.+. .+..++|+.|+..+++.+... ++.+++...-|.-
T Consensus 77 Pt~~~le~~----iaal~ga~~-------~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT~~~ 132 (409)
T KOG0053|consen 77 PTRDVLESG----IAALEGAAH-------ALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGTLRI 132 (409)
T ss_pred CchHHHHHH----HHHHhCCce-------EEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccHHHH
Confidence 445555555 899999985 788888898998888887642 4567766554433
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+.+....+|+....++++ |++++++++++++++|++-+|+||+..+-||++|.++|+++ |+.++||+.
T Consensus 133 l~~~~~~~gie~~~vd~~------~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~------g~~vvVDnT 200 (409)
T KOG0053|consen 133 LRKFLPKFGGEGDFVDVD------DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKY------GFLVVVDNT 200 (409)
T ss_pred HHHHHHHhCceeeeechh------hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhC------CCEEEEeCC
Confidence 455556778888888765 57889999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~ 324 (369)
++.++. ..| . ..|||.++-|.-||+++.... |+++.+..+.. ..+.....+++. ...
T Consensus 201 f~~p~~--~~p---L---~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~-~~l~~~~~~lg~------------~~~ 259 (409)
T KOG0053|consen 201 FGSPYN--QDP---L---PLGADIVVHSATKYIGGHSDVIGGSVVLNSEELA-SRLKFLQEDLGW------------CED 259 (409)
T ss_pred cCcccc--cCh---h---hcCCCEEEEeeeeeecCCcceeeeEEecCcHHHH-HHHHHHHHHhcC------------CCC
Confidence 987532 222 1 237999999999999877554 66665433222 122211222222 224
Q ss_pred HHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCCCccccc
Q 017569 325 IIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSYFYDTLH 367 (369)
Q Consensus 325 ~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~~~~~~~ 367 (369)
+..+|..++.+..-+++-.++.++|..+++.|++.+.+++-++
T Consensus 260 p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~Y 302 (409)
T KOG0053|consen 260 PFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYY 302 (409)
T ss_pred HHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEc
Confidence 7788888888877666644899999999999999998887654
No 270
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.56 E-value=2.4e-13 Score=138.53 Aligned_cols=225 Identities=12% Similarity=0.009 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
.+..+..|+.||++.. -.+++|+|.+|..++.++..+ ++.|+++.+.|-|+..++.+.|+.
T Consensus 198 ~eAe~~aA~~fgAd~t------yfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~~aLilsga~ 258 (713)
T PRK15399 198 LEAEEYIARTFGAEQS------YIVTNGTSTSNKIVGMYAAPA-------------GSTLLIDRNCHKSLAHLLMMSDVV 258 (713)
T ss_pred HHHHHHHHHHhCCCcE------EEEeCChHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCe
Confidence 3556679999999963 578889999999888887653 579999999999999999999999
Q ss_pred eEEEeccCCc----cccCH-----HHHHHHHhhc-----CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 178 LKEVKLEEGY----YVMNP-----VKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 178 v~~v~~~~~~----~~~d~-----~~L~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
+++++...+. +.+++ +.++++|.+. |+.+++++| |..|.+-|+++|.++| . -..+|+
T Consensus 259 PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~--g------~~~ilv 329 (713)
T PRK15399 259 PIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL--D------VPSIHF 329 (713)
T ss_pred eEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh--C------CCEEEE
Confidence 9998764221 23455 9999999753 468888888 5559999999999988 2 224589
Q ss_pred ecccccccccccCCCcc--cccc-CCCCcEE---EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCcccc
Q 017569 244 DAASGGFIAPFLYPDLE--WDFR-LPLVKSI---NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLN 317 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~~-~~~~Dsi---~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~ 317 (369)
|+|+|++.. +.|..+ ..+. ..++|.+ +-|.||.+.+-..++++.++.. .-...+........+
T Consensus 330 DEAhgah~~--F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~n~a~~m~~S-------- 398 (713)
T PRK15399 330 DSAWVPYTH--FHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETFNEAFMMHTS-------- 398 (713)
T ss_pred eccchhhhh--cCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHHHHHHHHHcC--------
Confidence 999998654 333221 1222 2257877 9999999998888899988653 111111111111111
Q ss_pred CCcchhHHHHHHHHHHHhc-HhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 318 FSKGSSQIIAQYYQFIRLG-FEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 318 ~tr~~~~~l~~~~~l~~lg-~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
-|.+....+++-.+.+.+. ..|...+ ++++.+..++++|++.+.
T Consensus 399 TSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~ 444 (713)
T PRK15399 399 TSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLRE 444 (713)
T ss_pred CCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 2455555677778888885 5788877 999999999999988653
No 271
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.55 E-value=1.3e-12 Score=127.92 Aligned_cols=252 Identities=12% Similarity=-0.028 Sum_probs=150.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
..|.+.+++.+.++........+. .+...++.+.+++++|.+. .+++++|++|+..++.+++..... .
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~a~~~~~~---~ 125 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRAFR--NDQLAPLYEELAALTGSHK-------VLPMNSGAEAVETAIKAVRKWGYE---V 125 (401)
T ss_pred CCHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh---c
Confidence 357788888888765432211111 1233344455788887653 899999999999999998764211 0
Q ss_pred cCCCCCCCeEEecCC-CcchHHHHHhhhcc-------------eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.|.+..+.+|++... .|-+...+.. .+. ++..+| ..|+++|++++.+++++|++..+.+
T Consensus 126 ~g~~~~~~~vi~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~~~~aii~e~~~~ 198 (401)
T PRK00854 126 KGVPEGQAEIIVCADNFHGRTLSIVG-FSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITPNTVAFLVEPIQG 198 (401)
T ss_pred cCCCCCCceEEEECCCcCCccHHHHh-ccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCeEEEEEccccC
Confidence 122222345555554 4544332221 111 122222 1378999999998999999999999
Q ss_pred CcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-ccccccCCCCcEEEEcCccCCCCC-CCeEE
Q 017569 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWDFRLPLVKSINVSGHKYGLVY-AGVGW 287 (369)
Q Consensus 214 ~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~ 287 (369)
++|.+.| +++|.++|+++ ++++++|++|.++.. .+. ......-...|.++++ |++.+. +..|+
T Consensus 199 ~~G~~~~~~~~l~~l~~l~~~~------gi~lI~DEv~~g~g~---~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~ 267 (401)
T PRK00854 199 EAGVIIPPAGYFTRVRELCTAN------NVTLILDEIQTGLGR---TGKLLAEEHEGIEADVTLIG--KALSGGFYPVSA 267 (401)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC---CchHhHHhhcCCCCCEEEec--ccccCCccCeEE
Confidence 9999876 99999999999 999999999985322 111 0011111135777764 888766 46788
Q ss_pred EEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCC
Q 017569 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~ 361 (369)
++.+++ .. ..+.. .. ...+. +. +........++|+.+..+++.+ +..++.+++.+.|+++++
T Consensus 268 v~~~~~-~~-~~l~~----~~---~~~t~-~~-~~~~~aa~~a~L~~l~~~~~~~-~~~~~~~~l~~~L~~~~~ 329 (401)
T PRK00854 268 VLSNSE-VL-GVLKP----GQ---HGSTF-GG-NPLACAVARAALKVLTEEGMIE-NAAEMGAYFLEGLRSIRS 329 (401)
T ss_pred EEEcHH-HH-hcccC----CC---CCCCC-Cc-CHHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHhhcc
Confidence 877542 22 12110 00 01111 11 1222344445555554333322 777889999999988754
No 272
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.55 E-value=4e-13 Score=128.06 Aligned_cols=257 Identities=12% Similarity=-0.085 Sum_probs=165.6
Q ss_pred cCCChHHHHHHHH-HHhccCCCC------CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeE-EeCCchHHHHHHHHH
Q 017569 65 TTWMEPECDKLVM-ASINKNYVD------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV-GTVGSSEAIMLAGLA 136 (369)
Q Consensus 65 ~~~~~~~v~~~~~-~~~~~n~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~-~t~Ggt~a~~~al~~ 136 (369)
|...|+.|.+.+. +.++.+... .-.++...++-+++.+.++++++.|.+ ..++ ++.|||.+.-.+.+.
T Consensus 12 Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~----y~Vlfl~GggT~~~ea~~~N 87 (364)
T PRK12462 12 PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDE----YGVVFLQGGSSLQFSMIPMN 87 (364)
T ss_pred CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCC----CeEEEEeccHHHHHHHHHHH
Confidence 3344566655555 444432211 113567788888999999999999753 2344 445688888777777
Q ss_pred HHHHHHHHHHhcCCCCCCCeEE-ecCCCcch--HHHHHhhhcceeEEEeccC---CccccCHHHHHHHHhhcCcEEEEee
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIV-TGANVQVC--WEKFARYFEVELKEVKLEE---GYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi-~s~~~h~s--~~~~~~~~G~~v~~v~~~~---~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
+..+ +++++ +-...+.+ +.+.++.+| ++..+.... .+..++++++ .+.++..+|.+++
T Consensus 88 ll~~-------------g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~ 151 (364)
T PRK12462 88 FSRP-------------GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVS 151 (364)
T ss_pred cCCC-------------CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEcc
Confidence 6442 23232 22233333 445555666 565554211 1235566665 3445678999999
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
..|.+|...| ++.+.+ +.++++|+..+.+.. +++++ ..|.+..++||.++ |+|.+++++
T Consensus 152 NETstGv~~~-----~~~~~~------~~llvvD~sS~~~s~-------pid~~--~~dvi~agsQKnlg-P~Gltvviv 210 (364)
T PRK12462 152 NETVEGLQFP-----DAAGLP------DSPLIADMSSDFMSR-------PFDVE--AYGMVYAHAQKNLG-PAGVTVAII 210 (364)
T ss_pred CCCCceEecC-----cccccC------CCeEEEEcCchhhCC-------CCChH--HccEEEeeccccCC-CCceEEEEE
Confidence 9999999875 334346 889999998776443 23333 45999999999997 999999999
Q ss_pred eCCCCcccccccccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh--hHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 291 RTKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE--VIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~--G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
+++.+- ..-...+.|+... ..+...-.|.+...+..+..+|+.+..+ |++.+ ++.+.|+.+++.+.++..|+
T Consensus 211 s~~al~-~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 211 RRALLE-RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred CHHHHh-hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 875321 1111112222210 0011222488888888888999999887 99999 99999999999999998443
No 273
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.54 E-value=1.1e-12 Score=127.07 Aligned_cols=255 Identities=14% Similarity=-0.030 Sum_probs=151.9
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.++++........+ ......++.+++++++|.+. .++++||++|+..++.+++.....
T Consensus 44 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~-------~~~~~sg~~a~~~a~~~~~~~~~~---- 110 (379)
T TIGR00707 44 AHPKLVEALKEQLEKLVHVSNLY--YTEPQEELAEKLVEHSGADR-------VFFCNSGAEANEAALKLARKYTGD---- 110 (379)
T ss_pred CCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHhhc----
Confidence 34778888887776532211111 22345566677999998763 899999999999999877542110
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeE----EEeccCCcccc----CHHHHHHHHhhcCcEEEEeeCCCCcccC-
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYVM----NPVKAVELVDENTICVAAILGSTLTGEF- 218 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~----~v~~~~~~~~~----d~~~L~~~i~~~~~~v~~~~~~~~tG~~- 218 (369)
.| ..+++|++++++|..+...+...+.... ..++..+ ... |+++|++.+++++++|+++.+++++|..
T Consensus 111 ~~--~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~ 187 (379)
T TIGR00707 111 KG--KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPG-FSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNP 187 (379)
T ss_pred cC--CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCC-ceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCcc
Confidence 00 0136788888776554444444443321 1222221 222 8999999998889999988777777754
Q ss_pred ---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 219 ---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
+++++|.++|+++ ++++++|++|.++.. ..........-...|.++ ..|.++++++.|+++..+ +.
T Consensus 188 ~~~~~l~~i~~l~~~~------~~~~i~De~~~~~~~--~g~~~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~-~~ 256 (379)
T TIGR00707 188 ASAEFLKALREICKDK------DALLIFDEVQTGIGR--TGKFFAYEHYGIEPDIIT--LAKGLGGGVPIGATLAKE-EV 256 (379)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhhHHhcCCCCCEEE--EcccccCCcccEEEEEcH-HH
Confidence 2489999999999 999999999976422 100001111111245555 579888778899988753 22
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
. ..+.. ... ...+ +-+.....++.++|+.+...++.+ +..++.++++++|++.+
T Consensus 257 ~-~~~~~----~~~-~~~~----~~~~~~~~aa~aaL~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 310 (379)
T TIGR00707 257 A-EAFTP----GDH-GSTF----GGNPLACAAALAVLEVIEKERLLE-NVKEKGDYFKERLEELG 310 (379)
T ss_pred H-hhhcC----CCC-CCCC----CCCHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHH
Confidence 2 22211 000 0011 122233455556666664333322 66778888888887653
No 274
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.53 E-value=3e-13 Score=129.02 Aligned_cols=160 Identities=12% Similarity=-0.012 Sum_probs=115.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
++++.+++.+|.++ ..+++|+|+++++.+++.. .. ...|++++|+|..+...++..|+++
T Consensus 44 ~lr~~ia~~~~~~~-----~~I~it~Gs~~~l~~~~~~-~~--------------~~~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 44 DIEDQIKIYTQGLK-----IKVLIGPGLTHFIYRLLSY-IN--------------VGNIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred HHHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHH-hC--------------CCcEEEeCCChHHHHHHHHHcCCeE
Confidence 44455888999986 3489999999999887753 22 1257777999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
+.||+++ ..+|.+.+++ .++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+...
T Consensus 104 ~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~DE~Y~~~~~~-- 170 (332)
T PRK06425 104 SALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK------GALLFIDEAFIDFVPN-- 170 (332)
T ss_pred EEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc------CCEEEEecchhccccc--
Confidence 9999975 3556666553 37899999999999999865 67777888899 9999999999875431
Q ss_pred CCCccccccCCCCcEEE-EcCccCCC-CCCCeEEEEEe
Q 017569 256 YPDLEWDFRLPLVKSIN-VSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 256 ~~~~~~~~~~~~~Dsi~-~~~hK~l~-~p~g~g~l~~~ 291 (369)
............-..+. -+.-|.++ .....|+++..
T Consensus 171 ~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~ 208 (332)
T PRK06425 171 RAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD 208 (332)
T ss_pred cchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC
Confidence 10000111001112344 35788776 77889999874
No 275
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.53 E-value=1.7e-12 Score=126.95 Aligned_cols=246 Identities=11% Similarity=-0.070 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+.++........++. ....++.+++++++|.+. .....+++||++|+..++..++..
T Consensus 61 ~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~----~~~v~~~~sgsea~~~al~~~~~~-------- 126 (398)
T PRK03244 61 HPAVVEAVTRQLATLGHVSNLFAT--EPQIALAERLVELLGAPE----GGRVFFCNSGAEANEAAFKLARLT-------- 126 (398)
T ss_pred CHHHHHHHHHHHHhccCccCccCC--HHHHHHHHHHHHhCCCCC----CCEEEEeCchHHHHHHHHHHHHHH--------
Confidence 577888888877652211111221 122366677888888541 124899999999999999987663
Q ss_pred CCCCCCCeEEecCCCcc-hHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 149 GKPYDKPNIVTGANVQV-CWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~-s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
| +..|+..+.+|. ....+....|.. +..+|. .|+++|++.+.+++++|++..+.+++
T Consensus 127 g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~~~~~~~aviiep~~~~~ 196 (398)
T PRK03244 127 G----RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY------GDVDALAAAVDDDTAAVFLEPIQGEA 196 (398)
T ss_pred C----CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC------CCHHHHHHhhcCCeEEEEEecccCCC
Confidence 1 245665554443 333333333322 222221 27899999997788899999999999
Q ss_pred ccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 216 GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 216 G~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
|.+.| +++|.++|+++ ++++|+|++|.++.. ......+...-...|.+++ .|+++++++.|+++.+
T Consensus 197 G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~ 266 (398)
T PRK03244 197 GVVPPPAGYLAAAREITDRH------GALLVLDEVQTGIGR--TGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAF 266 (398)
T ss_pred CCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--cchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEc
Confidence 99876 89999999999 999999999976322 1100001111113566665 5998877888999886
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
++ . .+.+.. .....+..++ .....+...+|+.+..+++.+ +..++.++|++.|++++
T Consensus 267 ~~-~-~~~~~~-------~~~~~t~~~~--~~~~aaa~a~l~~~~~~~~~~-~~~~~~~~l~~~L~~~~ 323 (398)
T PRK03244 267 GP-A-ADLLTP-------GLHGSTFGGN--PVACAAALAVLDTIASEGLLE-NAERLGEQLRAGIEALG 323 (398)
T ss_pred HH-H-HhhccC-------CCCcCCCCCC--HHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHhcC
Confidence 43 2 122210 0001111111 122344445555555444332 77788899999999865
No 276
>PLN02452 phosphoserine transaminase
Probab=99.53 E-value=4.1e-13 Score=129.02 Aligned_cols=256 Identities=13% Similarity=-0.022 Sum_probs=164.8
Q ss_pred cCCChHHHHHHHHHH-hccC---CCCC---CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMAS-INKN---YVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~-~~~n---~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
|...++.|.+.+..- ++-+ ..-. -.++...++-+++++.+.++++.+.+. ....+..|||.++-.++..+
T Consensus 15 P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y---~v~~l~Gsgt~~~ea~~~nl 91 (365)
T PLN02452 15 PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY---EVLFLQGGASTQFAAIPLNL 91 (365)
T ss_pred CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEeCccHHHHHHHHHhc
Confidence 334456666665543 3321 1111 134567788899999999999986421 22445567788887777766
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCC--ccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
..+ +.++++-....++ +.+.++.+|...+....... ...+++++++ ..++...|.+++..|
T Consensus 92 ~~~-------------~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnET 156 (365)
T PLN02452 92 CKP-------------GDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANET 156 (365)
T ss_pred CCC-------------CCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCC
Confidence 432 2344444444444 55666777864443322221 1256777753 245678999999999
Q ss_pred Cccc-CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 214 LTGE-FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 214 ~tG~-~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
.+|. +.|++++. ++.++||+++..+.. +++++..++|. .++||++ +|+|.|++++|+
T Consensus 157 stGv~~~~~~~i~------------~~~lvVDa~Ss~g~~-------pidv~~~~v~~--~saqK~l-GP~Gl~~v~vr~ 214 (365)
T PLN02452 157 IHGVEFKDYPDVG------------NVPLVADMSSNFLSK-------PVDVSKYGVIY--AGAQKNV-GPSGVTIVIIRK 214 (365)
T ss_pred CCcEecCcccccC------------CCeEEEECCccccCc-------ccCHHHcCEEE--Eeccccc-CCCCeEEEEEcH
Confidence 9999 58876653 468999999887655 34444334544 5899988 599999999986
Q ss_pred CCCcccccccccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhc-CC
Q 017569 293 KDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHS-SY 361 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~-g~ 361 (369)
+.+. ..-...+.|.... ..+..+.+|.+...+.++..+|+.+..+ |++.+ |+.+++++|++.|++. |+
T Consensus 215 ~~l~-~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~ 288 (365)
T PLN02452 215 DLIG-NARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF 288 (365)
T ss_pred HHHh-hcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5321 1101111222110 0111233788888899999999999876 89988 9999999999999985 55
No 277
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.50 E-value=1.5e-12 Score=123.99 Aligned_cols=204 Identities=13% Similarity=-0.018 Sum_probs=130.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
.+++.+++.+|.+. +++|+|+++++.+++.+ . .+++|++++|+|..+...++.+|+++
T Consensus 53 ~Lr~~ia~~~~~~~-------I~it~Gs~~al~~~~~~--~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 53 GLEAAARAYYGAPQ-------LLPVAGSQAAIQALPRL--R-------------APGRVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred HHHHHHHHHhCCCC-------EEECcCHHHHHHHHHHc--c-------------CCCEEEEcCCChHHHHHHHHHcCCeE
Confidence 34455788887653 89999999999776431 1 14789999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
+.||++ ++++++ +++++++++.|+||||.+.+ +++|+++|+++ ++++++|.+|..+.. .
T Consensus 111 ~~v~~~---------~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~------~~~iI~DE~y~~~~~-~- 172 (330)
T PRK05664 111 RELDEA---------EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR------GGWLVVDEAFMDNTP-Q- 172 (330)
T ss_pred EEechh---------hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc------CCEEEEECCcccCCC-c-
Confidence 988764 244555 36788899999999999966 55666667888 999999999975321 0
Q ss_pred CCCccccccCCCCc-EEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHH
Q 017569 256 YPDLEWDFRLPLVK-SINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 256 ~~~~~~~~~~~~~D-si~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~ 333 (369)
+. ...+. ..-. .+.-+..|.++ .....|+++.. ++.. ..+..... .+. .+ .+.++++..
T Consensus 173 -~s-~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~-------~~~--~~-----~~~~~~~~~ 233 (330)
T PRK05664 173 -HS-LAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLG-------PWT--VS-----GPTRWLAQA 233 (330)
T ss_pred -cc-ccccc-cCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcC-------CCC--CC-----HHHHHHHHH
Confidence 10 01111 1112 33445778875 77899999873 2222 22211100 110 11 222333334
Q ss_pred HhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 334 RLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 334 ~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+.... .+++ +..+..+++.+.|++.|+
T Consensus 234 ~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 264 (330)
T PRK05664 234 ALADTPWQRRQRERLLAASQRLAALLRRHGL 264 (330)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 442222 2223 666677889999988764
No 278
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.50 E-value=3.7e-12 Score=122.04 Aligned_cols=248 Identities=14% Similarity=-0.000 Sum_probs=169.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.+|.+.+++.+++.........+ .+...+-.++.+.+++++|.+. .++.++|=.||..++-++..+
T Consensus 54 ~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~-------al~f~SGy~AN~~~i~~l~~~---- 122 (388)
T COG0156 54 SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA-------ALLFSSGFVANLGLLSALLKK---- 122 (388)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEEcccchhHHHHHHHhcCC----
Confidence 35677888777776632222222 2444444455555999999985 666677788887777776542
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccC
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (369)
++.|+.-+..|.|+...+++.+++++..+- -|+++||+.+.+ +.++|+.-..-...|.+
T Consensus 123 ---------~dli~~D~lnHASiidG~rls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi 187 (388)
T COG0156 123 ---------GDLIFSDELNHASIIDGIRLSRAEVRRFKH------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI 187 (388)
T ss_pred ---------CcEEEEechhhhhHHHHHHhCCCcEEEecC------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence 567888888999999999999999877764 378999999977 35788888888899999
Q ss_pred CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-----cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-----EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-----~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
.|+++|++++++| +.|++||.||+.+++. +.. .+.+....+|.++....|.++ +.|.++..+.
T Consensus 188 ApL~~l~~L~~ky------~a~L~VDEAHa~Gv~G---~~GrG~~e~~g~~~~~vdi~~gTlsKAlG---s~Gg~v~g~~ 255 (388)
T COG0156 188 APLPELVELAEKY------GALLYVDEAHAVGVLG---PNGRGLAEHFGLEPEEVDIIVGTLGKALG---SSGGYIAGSA 255 (388)
T ss_pred CCHHHHHHHHHHh------CcEEEEEccccccccC---CCCccHHHHhCCCCccceEEEEEchhhhc---ccCceeeCcH
Confidence 9999999999999 9999999999987762 211 111212346899999999986 2333444433
Q ss_pred CCccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCc
Q 017569 294 DDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 294 ~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~ 363 (369)
... +.+.. ..+|+.. .+-+...+.++-.+++.+- ++-..+ +..++++++++.++..|+..
T Consensus 256 ~~~-d~L~~~ar~~ifS--------talpP~~aaa~~~al~~l~-~~~~~r~~L~~~~~~~~~~~~~~~~~~ 317 (388)
T COG0156 256 ALI-DYLRNRARPFIFS--------TALPPAVAAAALAALRILE-EGPERRERLQELAAFFRSLLKALGLVL 317 (388)
T ss_pred HHH-HHHHHhCCceecc--------CCCCHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 222 22222 2334332 1222333555667777774 344444 89999999998888878764
No 279
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.48 E-value=2.4e-12 Score=120.03 Aligned_cols=183 Identities=14% Similarity=0.051 Sum_probs=137.0
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~ 169 (369)
+-|...+++++.+.+.+..|-...+++ ...+++.|+|.||...+.++.++ ++.-++|.|.|+.+..
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fdP-~~~Vv~~G~T~ane~l~fcLadp-------------gdafLvPtPyY~gfdr 185 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFDP-ERVVVTNGATSANETLMFCLADP-------------GDAFLVPTPYYPGFDR 185 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccCc-cceEEecccchhhHHHHHHhcCC-------------CceeeecCCCCCcccc
Confidence 458899999999999999887765533 45899999999997776666553 4689999999999887
Q ss_pred HHhh-hcceeEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCC
Q 017569 170 FARY-FEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 170 ~~~~-~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~ 238 (369)
-+++ .|++++.|.+.. +++++++++||+++.+ +.+.|+++.|+||-|.+-+ +..+..++.++ +
T Consensus 186 dl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k------n 259 (471)
T KOG0256|consen 186 DLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK------N 259 (471)
T ss_pred cceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc------c
Confidence 7764 488898888864 6799999999998875 4689999999999999854 66777888888 9
Q ss_pred ceEEeecccccccccccCCCc--------cccccCCCCcEEEEcCccCCCC-CCCeEEEEEeCCCC
Q 017569 239 TPIHVDAASGGFIAPFLYPDL--------EWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDD 295 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~--------~~~~~~~~~Dsi~~~~hK~l~~-p~g~g~l~~~~~~~ 295 (369)
+.+++|++|.+.++. .++. ...+....+ -+..+..|=++. +...|+++..++..
T Consensus 260 iHvI~DEIya~sVF~--~~~F~Sv~ev~~~~~~~~~rv-HivyslSKD~GlpGfRvGviYS~ne~V 322 (471)
T KOG0256|consen 260 IHVISDEIYAGSVFD--KSEFRSVLEVRKDPHLDPDRV-HIVYSLSKDFGLPGFRVGVIYSNNEDV 322 (471)
T ss_pred eEEEeehhhcccccC--ccCceEHHHHhhccccCCCcE-EEEEEeccccCCCceEEEEEEecChHH
Confidence 999999999987652 2211 111111222 244565565544 45778888766543
No 280
>PRK07505 hypothetical protein; Provisional
Probab=99.47 E-value=9.5e-12 Score=121.79 Aligned_cols=196 Identities=15% Similarity=0.037 Sum_probs=123.8
Q ss_pred CChHHHHHHHHHHhccCC-CCCCCC--cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY-VDMDEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~-~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|.+.+++.+.++... ..+..+ ....+...++.+.+++++|. . .+++++|++|+..++..+...+.
T Consensus 60 ~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-------~~~~~sG~~a~~~ai~~~~~~~~- 130 (402)
T PRK07505 60 DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S-------VLTFTSCSAAHLGILPLLASGHL- 130 (402)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C-------EEEECChHHHHHHHHHHHHhccc-
Confidence 346888888888876421 121111 12355666788889999987 3 56666788999888876543110
Q ss_pred HHHhcCCCCCCCeE-EecCCCcchHHHHH--hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC
Q 017569 144 KRKEQGKPYDKPNI-VTGANVQVCWEKFA--RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (369)
Q Consensus 144 ~~~~~g~~~~~~~V-i~s~~~h~s~~~~~--~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (369)
..++..| +.....|.++.... ...+.+++.+|. .|+++|++++++++++++++.|+||+|.+.|
T Consensus 131 -------~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~------~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~ 197 (402)
T PRK07505 131 -------TGGVPPHMVFDKNAHASLNILKGICADETEVETIDH------NDLDALEDICKTNKTVAYVADGVYSMGGIAP 197 (402)
T ss_pred -------CCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC------CCHHHHHHHHhcCCCEEEEEecccccCCcCC
Confidence 1012334 44557787764322 223456666664 2789999999888889999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccc-cccCCCcccccc--CCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFR--LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~--~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
+++|.++|+++ ++++++|++|+...+ ++-.......+. ......++.+.-|.++++ | |++++.+
T Consensus 198 ~~~i~~l~~~~------~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-G-g~~~~~~ 264 (402)
T PRK07505 198 VKELLRLQEKY------GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-G-GVIMLGD 264 (402)
T ss_pred HHHHHHHHHHc------CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-C-eEEEeCC
Confidence 99999999999 999999999853211 111000000111 122334455788987644 3 6665444
No 281
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.45 E-value=2.1e-11 Score=121.09 Aligned_cols=196 Identities=15% Similarity=0.001 Sum_probs=148.2
Q ss_pred HHHHHHHHHHhcc---C-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 70 PECDKLVMASINK---N-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 70 ~~v~~~~~~~~~~---n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
....+.+...+.. . ...+....+...|++.+.+++....|...+. ..+++|+|+.+|+.+++..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~---~~IiiT~G~q~al~l~~~~l~~p----- 178 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP---EQIVITSGAQQALDLLLRLLLDP----- 178 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc---CeEEEeCCHHHHHHHHHHHhCCC-----
Confidence 4455666555532 2 3445555789999999999999778887643 35999999999999888887653
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEE-EeeCCCCcccCCCH--
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVA-AILGSTLTGEFEDV-- 221 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~-~~~~~~~tG~~~~l-- 221 (369)
++.|++-+|+|+....+.+.+|++++.||+|++ -||+++|++.+.. ++++++ .-.-+||||...+.
T Consensus 179 --------Gd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~--G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~r 248 (459)
T COG1167 179 --------GDTVLVEDPTYPGALQALEALGARVIPVPVDED--GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLER 248 (459)
T ss_pred --------CCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC--CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHH
Confidence 579999999999999999999999999999864 7999999999986 566655 55688999999765
Q ss_pred -HHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--ccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 222 -KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 222 -~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
++|.++|+++ ++|++-|..|+.+.. ..+..+ ..++..+==....++-|.+....++|++++.
T Consensus 249 R~~Ll~lA~~~------~~~IIEDD~y~el~~--~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p 313 (459)
T COG1167 249 RKALLALAEKY------DVLIIEDDYYGELRY--DGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAP 313 (459)
T ss_pred HHHHHHHHHHc------CCeEEeeCcchhhhc--CCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCC
Confidence 5799999999 999999999997554 211111 1111111122334577999988999999874
No 282
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.43 E-value=5.6e-12 Score=120.61 Aligned_cols=206 Identities=12% Similarity=-0.026 Sum_probs=132.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
++++++++.+|.+.. ..+++|+|+++++..... +.. ...|+++.|+|..+...++..|+++
T Consensus 57 ~L~~~ia~~~~~~~~----~~I~i~~Gs~e~i~~l~~-~~~--------------~g~v~v~~P~y~~y~~~~~~~g~~~ 117 (339)
T PRK06959 57 GLAACAARYYGAPDA----AHVLPVAGSQAAIRALPA-LLP--------------RGRVGIAPLAYSEYAPAFARHGHRV 117 (339)
T ss_pred HHHHHHHHHhCCCCc----ccEEECcCHHHHHHHHHH-hcC--------------CCeEEEcCCCcHHHHHHHHHCCCEE
Confidence 566679999999731 248999999999865433 222 1248889999999999999999998
Q ss_pred EEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH---HHHhhhccCCCceEEeeccccccccccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL---LTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l---~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
+.+|.+. +. +.+.++++++++|+||||.+-+.+++.++ |+++ +.++++|++|..+.. .
T Consensus 118 ~~v~~~~-------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~------~~~vI~DEay~~~~~--~ 178 (339)
T PRK06959 118 VPLDEAA-------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR------GGTLIVDEAFADTLP--A 178 (339)
T ss_pred Eeecccc-------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccCCC--c
Confidence 8887653 11 22345789999999999999776665555 5567 899999999987532 0
Q ss_pred CCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHH
Q 017569 256 YPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 256 ~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~ 333 (369)
+.. ..+ ...++ .+.-+.-|.++ .+...|+++.. ++.. +.+... . ..+ +- ..+.+.++..
T Consensus 179 -~s~-~~~~~~~~v-i~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~----~---~~~----~v---s~~~q~a~~~ 239 (339)
T PRK06959 179 -ASL-AAHTDRPGL-VVLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDA----L---GAW----TV---SGPARHAVRA 239 (339)
T ss_pred -ccc-hhccCCCCE-EEEecChhhcCCcchheEEEecC-HHHH-HHHHHh----c---CCC----CC---cHHHHHHHHH
Confidence 110 011 11221 34456788775 77899999874 2222 222110 0 011 11 1344555555
Q ss_pred HhcHhhHHHH---HhhHHHHHHHHHHHhcCC
Q 017569 334 RLGFEVIPSF---CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 334 ~lg~~G~~~~---~~~~~a~~l~~~L~~~g~ 361 (369)
.+....+.+. +..+..+++.+.|++.|+
T Consensus 240 ~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~ 270 (339)
T PRK06959 240 AFADAAWQAAMRERLAADGARLAALLRAHGF 270 (339)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5544444433 666777889999988764
No 283
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.43 E-value=2.8e-11 Score=118.22 Aligned_cols=254 Identities=12% Similarity=-0.026 Sum_probs=149.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++........ .......++.+.++++.+.+ ...++++|++|+..|+..++..+...
T Consensus 56 h~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~-------~~~~~~SGseA~e~Alk~a~~~~~~~-- 124 (396)
T PRK04073 56 HRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLTGKD-------MVLPMNTGAEAVETAIKAARRWAYDV-- 124 (396)
T ss_pred CCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcCCCC-------eEEEcCChHHHHHHHHHHHHHHhhhc--
Confidence 44688888888877653222111 12223334555577776654 27899999999999999987642210
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.|....+.+|+... ..|-....++...+-. +..+|. -|+++|++++++++++|+++.+++
T Consensus 125 -~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~viiep~~~ 197 (396)
T PRK04073 125 -KGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------GDLEALKAAITPNTAAFLVEPIQG 197 (396)
T ss_pred -cCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC------CCHHHHHHhcccCeEEEEEcCccC
Confidence 12111234566554 4554444444433311 122221 178999999988899999999999
Q ss_pred CcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEE
Q 017569 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (369)
Q Consensus 214 ~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l 288 (369)
++|.+.| +++|.++|+++ ++++++|++|.++... ......+..-...|.+++ .|.++++ +..|++
T Consensus 198 ~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~~--g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~ 267 (396)
T PRK04073 198 EAGINIPPEGFLKAARELCKEE------NVLFIADEIQTGLGRT--GKLFACDWDNVTPDMYIL--GKALGGGVFPISCV 267 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhCCCcC--cHHHHhhhcCCCCCEEEe--cccccCCCCcceEE
Confidence 9999854 89999999999 9999999999864221 000011111124677775 5877665 678888
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
+.++ +.. +.+.. . ....+..+. +. ...+.-++|+.+..+++.+ +..++.++|.+.|++++
T Consensus 268 ~~~~-~i~-~~~~~------~-~~~~t~~~~-~~-~~aaa~aaL~~~~~~~l~~-~~~~~~~~l~~~L~~l~ 327 (396)
T PRK04073 268 AANR-DIL-GVFTP------G-SHGSTFGGN-PL-ACAVSIAALEVLEEEKLPE-RSLELGEYFKEQLKEID 327 (396)
T ss_pred EEcH-HHH-hhhcC------C-CCCCCCCCC-HH-HHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHhhc
Confidence 7753 222 12110 0 001111121 11 1222335555554444433 66677899999998864
No 284
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.42 E-value=3.2e-11 Score=117.73 Aligned_cols=198 Identities=14% Similarity=-0.047 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
.|.+.+++.+.++...... ......++.++.++++++.|.+. ..+++||++|+..++++++.....
T Consensus 57 ~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~-------v~~~~gg~eA~~~al~~a~~~~~~----- 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIHTS--NLYYIEPQEELAEKLVELSGMDK-------VFFCNSGAEANEAAIKLARKYGHK----- 122 (396)
T ss_pred CHHHHHHHHHHHhhccccc--cccCCHHHHHHHHHHHhhcCCCE-------EEECCCcHHHHHHHHHHHHHHhcc-----
Confidence 4778888887776432111 11235667778888998877643 899999999999999988764210
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhc-ceeE---EEeccCCcc----ccCHHHHHHHHhhcCcEEEEeeCCCCccc-C-
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFE-VELK---EVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGE-F- 218 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G-~~v~---~v~~~~~~~----~~d~~~L~~~i~~~~~~v~~~~~~~~tG~-~- 218 (369)
....+++|++..+++..+...+...+ .... ..++.. ++ ..|+++|++++.+++++|+++.+++++|. +
T Consensus 123 -~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~ 200 (396)
T PRK02627 123 -KGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVE-GFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPA 200 (396)
T ss_pred -cCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCC-CceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccC
Confidence 00112567777766544333332222 2111 112111 11 12899999999888999999988899884 3
Q ss_pred --CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 219 --~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
+.+++|.++|+++ ++++++|++|.++.. ......+...-...|.++ ..|.++++...|+++.++
T Consensus 201 ~~~~l~~l~~l~~~~------~~~lI~DE~~~g~g~--~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~ 266 (396)
T PRK02627 201 DKEYLQALRELCDEN------GILLILDEVQTGMGR--TGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE 266 (396)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEechhcCCCc--cCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcH
Confidence 3499999999999 999999999986432 111001111111246555 448877777889998754
No 285
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.42 E-value=5e-12 Score=124.35 Aligned_cols=229 Identities=10% Similarity=-0.016 Sum_probs=165.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
++..+..++.||++.. -.+++|.|.||...+.++..+ ++.|+++.+.|-|...++.+.|+.
T Consensus 73 ~eAqe~aA~~fgAd~t------yFvvNGTS~ank~vi~a~~~~-------------GD~VLvdRN~HKSi~~glilaGa~ 133 (557)
T COG1982 73 KEAQELAARVFGADHT------YFVVNGTSTANKAVINAVLTP-------------GDKVLVDRNCHKSIHHGLILAGAT 133 (557)
T ss_pred HHHHHHHHHHhCCCce------EEEECCccHHHHHHHHhhcCC-------------CCEEEecCCccHHHHHHHHHcCCc
Confidence 3556679999999963 577889999998888887653 589999999999999999999999
Q ss_pred eEEEeccCCc-----cccCHHHHHHHHhhc--C-cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 178 LKEVKLEEGY-----YVMNPVKAVELVDEN--T-ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 178 v~~v~~~~~~-----~~~d~~~L~~~i~~~--~-~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++++....+. +.++.+.+++++.+. . ++++++.||.. |.+-++++|.+.++.. ++|+.+|.+++.
T Consensus 134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYd-Gv~~n~~~i~~~~~~~------~a~v~~deah~~ 206 (557)
T COG1982 134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYD-GVCYNLRKIVELLHHY------GAWVLYDEAHPA 206 (557)
T ss_pred eEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccc-eEeecHHHHHHHHhhc------CceEEhhhcCcc
Confidence 8888764332 578999999988654 3 66777877555 9999999999999999 999999999986
Q ss_pred ccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc-cccccccCccCCCCCCccccCCcchhHHHH
Q 017569 250 FIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP-DELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~ 327 (369)
..- .++..+ +.. ..++|.++-|.||.+.+-..++++.+++...+. ..+........ ..|.+....++
T Consensus 207 ~~~--~~~~l~-~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~--------STSPsY~l~AS 275 (557)
T COG1982 207 HFD--FSPMLP-ESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQ--------STSPSYPLMAS 275 (557)
T ss_pred ccc--ccccCc-chhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHc--------cCCchHHHHHH
Confidence 543 233222 222 368999999999999888888889888642221 11111111111 13444555566
Q ss_pred HHHHHHHhcHhhHHHH-----HhhHHHHHHHHHHHhcCCCc
Q 017569 328 QYYQFIRLGFEVIPSF-----CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 328 ~~~~l~~lg~~G~~~~-----~~~~~a~~l~~~L~~~g~~~ 363 (369)
+-.+-...|..|.+.+ ..++..+++++..++.++|+
T Consensus 276 lD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~ 316 (557)
T COG1982 276 LDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFP 316 (557)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 6666666677787774 55666667777777777554
No 286
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.41 E-value=4.2e-11 Score=116.68 Aligned_cols=255 Identities=11% Similarity=-0.110 Sum_probs=147.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.+++-...... .......++.+.++++.+.+ ...+++||++|+..++++++.... .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~~~al~~ar~~~~----~ 114 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENSFAD-------KVFFTNSGAEAVECAIKTARRYHY----G 114 (389)
T ss_pred CCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhCCCC-------EEEEcCCcHHHHHHHHHHHHHHHH----h
Confidence 4577888888877642221111 11223334556677776543 389999999999999999876421 1
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEE----eccCCccc----cCHHHHHHHHhhcCcEEEEeeCCCCcccC-
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV----KLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEF- 218 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v----~~~~~~~~----~d~~~L~~~i~~~~~~v~~~~~~~~tG~~- 218 (369)
+|.. .+.+|++.++.|..+...+...+...... |..+ ++. .|++++++++++++++|++...++++|..
T Consensus 115 ~G~~-~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 115 KGHP-ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVP-GFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRP 192 (389)
T ss_pred cCCC-CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCC-CceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcC
Confidence 2211 23578887776665444443333322221 1111 122 58999999998889999999888887743
Q ss_pred ---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 219 ---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
+++++|.++|+++ ++++++|++|.++.. ...-......-...|.++ ..|.+.+.+..|+++.+++ .
T Consensus 193 ~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~~-~ 261 (389)
T PRK01278 193 APDEFLKGLRQLCDEN------GLLLIFDEVQCGMGR--TGKLFAHEWAGVTPDIMA--VAKGIGGGFPLGACLATEE-A 261 (389)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCcceeecccCCCCCEEE--EehhccCCcceEEEEEcHH-H
Confidence 4799999999999 999999999986432 111001111111245554 5688776677899887543 2
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
. +.+.. .....+. +-+.....++.++|+.+..+++.+ +..++.++++++|+++
T Consensus 262 ~-~~~~~-------~~~~~t~--~~~~~~~aaa~a~l~~l~~~~~~~-~~~~~~~~l~~~l~~l 314 (389)
T PRK01278 262 A-KGMTP-------GTHGSTY--GGNPLAMAVGNAVLDVILAPGFLD-NVQRMGLYLKQKLEGL 314 (389)
T ss_pred H-hccCC-------CCCCCCC--CccHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHH
Confidence 1 22110 0001111 111122333334566554444332 5666677777777653
No 287
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.41 E-value=3.3e-11 Score=118.21 Aligned_cols=256 Identities=14% Similarity=-0.009 Sum_probs=158.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|.+.++..++++........+ .+...+.+++.+.+++++|.+. .++.++|-.||+.++.++......
T Consensus 116 ~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~-------all~sSGy~AN~~~i~aL~~~~~~ 188 (476)
T PLN02955 116 SSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED-------CLVCPTGFAANMAAMVAIGSVASL 188 (476)
T ss_pred CCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc-------EEEECChHHHHHHHHHHHhhcccc
Confidence 346888888888877654333322 2555555566666999999986 788889999998888776311000
Q ss_pred HHHhcCC--CCCCCeEEecCCCcchHHHHHhhh----cceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCC
Q 017569 144 KRKEQGK--PYDKPNIVTGANVQVCWEKFARYF----EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTL 214 (369)
Q Consensus 144 ~~~~~g~--~~~~~~Vi~s~~~h~s~~~~~~~~----G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~ 214 (369)
....+. ..+++.|+.-...|.|+...+++. ++++..++-+ |+++|+++++. +.++|++...-++
T Consensus 189 -~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~~Vv~EgV~Sm 261 (476)
T PLN02955 189 -LAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC------DMYHLNSLLSSCKMKRKVVVTDSLFSM 261 (476)
T ss_pred -ccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC------CHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 000000 112346777778899999999886 4555554432 68889888864 3467777777888
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
.|.+.|+++|.++|+++ ++++++|.|++.+++..-.......+. ...+|.++.+..|.++... |+++.++
T Consensus 262 dGdiapL~eL~~L~~~~------ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G--Gfi~gs~- 332 (476)
T PLN02955 262 DGDFAPMEELSQLRKKY------GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG--GFIACSK- 332 (476)
T ss_pred CCCcCCHHHHHHHHHHc------CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC--ceeecHH-
Confidence 99999999999999999 999999999997765211000011121 2467889999999975333 5566543
Q ss_pred CCccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHH
Q 017569 294 DDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFF 355 (369)
Q Consensus 294 ~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~ 355 (369)
+.. +.+.. ...|..+ ..-+...+.+.-++++.+-.+. ..+ +..++.+||++.
T Consensus 333 ~~~-~~l~~~~~~~ifS--------talpp~~aaa~laal~l~~~~~-~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 333 KWK-QLIQSRGRSFIFS--------TAIPVPMAAAAYAAVVVARKEK-WRRKAIWERVKEFKAL 386 (476)
T ss_pred HHH-HHHHHhCCCCeec--------ccccHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHh
Confidence 222 22211 1122221 1112222344445555553332 233 778888888874
No 288
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.41 E-value=4e-11 Score=109.08 Aligned_cols=234 Identities=13% Similarity=0.024 Sum_probs=168.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc-----ch
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-----VC 166 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h-----~s 166 (369)
....+-+.+...++.++|+...+ .+++.+.+--++-.+.++.+. ..+..||+++..- |.
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~E-----vvv~dtts~nl~k~L~aalr~-----------~~~r~vIv~E~~~fpTdly~ 136 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGE-----VVVTDTTSINLFKVLAAALRP-----------QEGRRVIVSEGDNFPTDLYI 136 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCc-----eEEeCCcchHHHHHHHHHhcc-----------CCCceEEeecCCCCCcchhh
Confidence 34455567888999999998732 555544444343444444332 1245788876432 23
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
.+..++++|.. .+- .+.+++.++++++++++..|.+++.+.-||..-|+.+|..+++++ ++++.-|=|
T Consensus 137 a~g~~~~~~~~-----~~~-~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~------galv~wDLA 204 (407)
T COG3844 137 AEGLADLLGIG-----YDL-EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH------GALVGWDLA 204 (407)
T ss_pred hcchhhhhccc-----ccc-eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhc------CceEEeehh
Confidence 44455666654 121 257788899999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe-EEEEEeCCCCcccccccccCccCCCCC-----Cc------
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV-GWVVWRTKDDLPDELVFHINYLGSDQP-----TF------ 314 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~y~~~~~~-----~~------ 314 (369)
++.+.. +.++...++|+-+.++||++++.+|. +.+++.++.. ....+.-..|.++... .|
T Consensus 205 HsaGav-------p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p~~ga 276 (407)
T COG3844 205 HSAGAV-------PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAPGPGA 276 (407)
T ss_pred cccCCc-------ceeecccCCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCcCccc
Confidence 998877 34555669999999999999876654 7777765432 2333444567665421 01
Q ss_pred --cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 315 --TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 315 --~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+.++.+......+..+|..++.-++.++ +...++.|+.+.++++-.
T Consensus 277 ~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~ 327 (407)
T COG3844 277 RRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCE 327 (407)
T ss_pred cceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc
Confidence 13467777777888889999998899888 999999999999988654
No 289
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.40 E-value=1.3e-11 Score=118.57 Aligned_cols=259 Identities=12% Similarity=0.037 Sum_probs=155.3
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++...++|.. ..-.|..+|...+||+. +++++|.+. .+.|..|+.++..++.+...+
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~----vael~G~E~-------alpthqGRgaE~Il~~~~~~~------- 112 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAES----VKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKK------- 112 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHH----HHHHhCCce-------EEECCCCchHHHHHHHhhccc-------
Confidence 44555555443 22235567788888877 788999986 788988899999888876542
Q ss_pred cCCCCC--CCeEEecCCCcchH-HHHHhhhcceeEEEecc---------CCccccCHHHHHHHHhh----cCcEEEEeeC
Q 017569 148 QGKPYD--KPNIVTGANVQVCW-EKFARYFEVELKEVKLE---------EGYYVMNPVKAVELVDE----NTICVAAILG 211 (369)
Q Consensus 148 ~g~~~~--~~~Vi~s~~~h~s~-~~~~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~----~~~~v~~~~~ 211 (369)
+|.... .+..+++...|+-. ...+.+.|+.++.++.+ +..+.+|+++|+++|.+ +..++..+..
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 111100 01114455555543 34566778887776432 22489999999999985 2233333333
Q ss_pred CCCc-ccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-------CCccccc--c-CCCCcEEEEcCcc
Q 017569 212 STLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-------PDLEWDF--R-LPLVKSINVSGHK 277 (369)
Q Consensus 212 ~~~t-G~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-------~~~~~~~--~-~~~~Dsi~~~~hK 277 (369)
+|.. |.+ +++.++.++|+++ |+.+|.|||=-+-..-|+. ....-++ . ...+|++++|..|
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~------GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK 266 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKY------DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK 266 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHc------CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC
Confidence 3433 444 6688999999999 9999999973221000011 1100111 1 3689999999999
Q ss_pred CCCCCCCeEEEEEeCC---CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHH
Q 017569 278 YGLVYAGVGWVVWRTK---DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSF 354 (369)
Q Consensus 278 ~l~~p~g~g~l~~~~~---~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~ 354 (369)
-+++|.| |+++.+++ +++.+.-..-..|-+. .++ |..+++..-++...|...-.+.+-. +.+...+||.+
T Consensus 267 glgApvG-g~Lag~d~~~~~l~~~~~~~~i~~EGf--~tY---GGlagrd~ea~a~Gl~e~~~~~yl~-~ri~qv~yl~~ 339 (467)
T TIGR02617 267 DAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQEGF--PTY---GGLEGGAMERLAVGLYDGMNLDWLA-YRINQVQYLVN 339 (467)
T ss_pred CCCCccc-ceEEecchhHHHHHHHHHhhcccccCC--cCc---CchhHHHHHHHHhhhhhcccHHHHH-HHHHHHHHHHH
Confidence 9999998 67878776 3332221111222221 222 4555554444444444443322222 66777889999
Q ss_pred HHHhcCC
Q 017569 355 FVIHSSY 361 (369)
Q Consensus 355 ~L~~~g~ 361 (369)
+|.+.|.
T Consensus 340 ~L~~~Gv 346 (467)
T TIGR02617 340 GLEEIGV 346 (467)
T ss_pred HHHhCCC
Confidence 9998875
No 290
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=3.6e-11 Score=110.73 Aligned_cols=264 Identities=11% Similarity=0.006 Sum_probs=173.7
Q ss_pred ChHHHHHHHHHHhccC--CCCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe--CCchHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKN--YVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT--VGSSEAIMLAGLAFK 138 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n--~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t--~Ggt~a~~~al~~~~ 138 (369)
....|.|++-+.+++. .+.+ +...-..++|.-+++.--+.||++++ .||+-+ .+|+-||+.+..++.
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~----kWGVNVQp~SGSPANfavYtall 127 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPE----KWGVNVQPYSGSPANFAVYTALL 127 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHH----HCceeeccCCCCchhhHHHhhhc
Confidence 4467888888887542 1222 11224678888788888899999973 466433 488999988777765
Q ss_pred HHHHHHHHhcCCCCCCCeEE---ecCCCcchH--HHHHhhhcce-----eEEEeccCCccccCHHHHHHHHhh-cCcEEE
Q 017569 139 RKWQQKRKEQGKPYDKPNIV---TGANVQVCW--EKFARYFEVE-----LKEVKLEEGYYVMNPVKAVELVDE-NTICVA 207 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi---~s~~~h~s~--~~~~~~~G~~-----v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~ 207 (369)
.+ .++|. .|+-.|-+. ....+-..+. --...+++.++-||.+.||+.... +|++|+
T Consensus 128 ~P-------------h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~ii 194 (477)
T KOG2467|consen 128 KP-------------HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLII 194 (477)
T ss_pred CC-------------CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEE
Confidence 53 12332 455555431 1111111111 122345666799999999986544 788776
Q ss_pred EeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEE
Q 017569 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (369)
Q Consensus 208 ~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~ 287 (369)
.|.+.....-|...+.+||.+. +.++.+|.|+-.+.. .....+.. .+.+|.++..+||-+-+|.| |+
T Consensus 195 --aG~SaY~R~~DYaR~R~Iad~~------gA~Lm~DMAHISgLV--AA~vipsP--Fey~DiVTTTTHKsLRGPRg-~m 261 (477)
T KOG2467|consen 195 --AGTSAYSRLIDYARFRKIADKV------GAYLMADMAHISGLV--AAGVIPSP--FEYCDIVTTTTHKSLRGPRG-AM 261 (477)
T ss_pred --eccccchhhccHHHHHHHHHhc------CceeehhhhhHHHHH--hcccCCCc--ccccceeeccccccccCCcc-ee
Confidence 4555555667899999999999 999999998754433 11111222 34799999999999998887 67
Q ss_pred EEEeCCCCccccc-ccccCccCCC----CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 288 VVWRTKDDLPDEL-VFHINYLGSD----QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 288 l~~~~~~~~~~~~-~~~~~y~~~~----~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++|+.-.....- -....|--.. ..-+.++|.+....+.++..+|+.-....|.+. +..+||+-|+++|.++|
T Consensus 262 IFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 262 IFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred EEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7777642221100 0011121100 012457788877789999999999988889888 99999999999999998
Q ss_pred C
Q 017569 361 Y 361 (369)
Q Consensus 361 ~ 361 (369)
|
T Consensus 342 y 342 (477)
T KOG2467|consen 342 Y 342 (477)
T ss_pred c
Confidence 7
No 291
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.39 E-value=5.5e-11 Score=116.26 Aligned_cols=258 Identities=11% Similarity=-0.081 Sum_probs=147.5
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.-......+ .......+.+.++++++.+. ..++++|++|+..++..++.....+
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~~~~~~~~~--- 115 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLFGYDK-------VLPMNSGAEAGETALKFARKWGYEV--- 115 (400)
T ss_pred CCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHhc---
Confidence 46778888887765432211111 12344556666888877653 7899999999999999887532111
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHhhhcceeE---EEeccCC---ccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCC
Q 017569 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~ 219 (369)
.|.+..+..|++.+ ..|-.....+...+-... ..+..++ -...|+++|++.++ +++++|++..+.+++|.+.
T Consensus 116 ~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~ 195 (400)
T PTZ00125 116 KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIV 195 (400)
T ss_pred cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCcc
Confidence 11111234555544 445554444443332110 0011000 00138999999996 5788999988999999987
Q ss_pred C----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCCC
Q 017569 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKD 294 (369)
Q Consensus 220 ~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~~ 294 (369)
| +++|.++|+++ ++++++|++|.++... .........-...|.++++ |++.++. +.|+++.+++
T Consensus 196 ~~~~~l~~l~~l~~~~------~~lli~Dev~~g~g~~--G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~- 264 (400)
T PTZ00125 196 PDDGYLKQVYELCKKY------NVLLIVDEIQTGLGRT--GKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDD- 264 (400)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCcc--chhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHH-
Confidence 6 99999999999 9999999998753210 0000111111135777754 9987764 7898887542
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
.. ..+.. ..+ ..+..++. ....+...+|+.+..+++.+ +..++.++++++|+++
T Consensus 265 ~~-~~~~~-~~~------~~t~~~~~--~~~~aa~~~l~~i~~~~~~~-~~~~~~~~l~~~l~~l 318 (400)
T PTZ00125 265 VM-LVIKP-GEH------GSTYGGNP--LACAVAVEALEVLKEEKLAE-NAQRLGEVFRDGLKEL 318 (400)
T ss_pred HH-hhccC-CCC------CCCCCcCH--HHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHH
Confidence 21 11110 000 11111111 12333345566665555433 5556778888888764
No 292
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.36 E-value=3.4e-11 Score=117.76 Aligned_cols=247 Identities=10% Similarity=-0.001 Sum_probs=172.6
Q ss_pred CCCCCC-CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC
Q 017569 83 NYVDMD-EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA 161 (369)
Q Consensus 83 n~~~~~-~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~ 161 (369)
.++.|. ...+..++-.++.+++.++.|.|. ...--++|..+-+.+++++|..... .| ...+...++|-
T Consensus 569 HPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~------~s~QPNsGA~GEYaGL~~IRaY~~~----kg-e~hRnvClIPv 637 (1001)
T KOG2040|consen 569 HPFAPVEQAQGYQQLFTELEKDLCEITGFDS------FSLQPNSGAQGEYAGLRVIRAYLES----KG-EGHRNVCLIPV 637 (1001)
T ss_pred CCCCchHHHhhHHHHHHHHHHHhheeecccc------eeecCCCCcccchhhHHHHHHHHHh----cc-CCcceeEEEee
Confidence 444442 234778888888999999999985 1233346677777777777765332 12 22456889999
Q ss_pred CCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCC-CHHHHHHHHHHhhhccCC
Q 017569 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE-DVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~-~l~~I~~l~~~~~~~~~~ 237 (369)
..|-.....+.+.|.+|+.|.++.+ +.+|..+|+++.++ +-.++.+++|+|. |..+ .+.+++++.+++
T Consensus 638 SAHGTNPASA~MagmkvvpV~~~~~-G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh------ 709 (1001)
T KOG2040|consen 638 SAHGTNPASAAMAGMKVVPVGCDAN-GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH------ 709 (1001)
T ss_pred cccCCChhhHHhcCCEEEEeeccCC-CCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc------
Confidence 9999888889999999999999875 89999999998875 3578899999998 8885 599999999999
Q ss_pred CceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-----CCCCeEEEEEeCCCCcccccccccCc--cCCC
Q 017569 238 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-----VYAGVGWVVWRTKDDLPDELVFHINY--LGSD 310 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-----~p~g~g~l~~~~~~~~~~~~~~~~~y--~~~~ 310 (369)
|--+..|||-=.......+|. ..|+|..-.+.||.++ +++|.|-+.+|. .+...+...+-- ....
T Consensus 710 GGQVYlDGANMNAqVGlc~pG------d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~--HLapfLP~HpVvs~~~~~ 781 (1001)
T KOG2040|consen 710 GGQVYLDGANMNAQVGLCRPG------DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSPGRPE 781 (1001)
T ss_pred CCEEEecCCCccceecccCCc------cccccceeecccceeeecCCCCCCCCCccchhh--hccccCCCCCccCCCCCC
Confidence 999999998432222222231 3489999999999954 445667777764 222222221111 0111
Q ss_pred CCC-c-ccc----CCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 311 QPT-F-TLN----FSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 311 ~~~-~-~l~----~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
+.. . +.. |+- ......|++++.||..|+... -.+-||.|++++|+.
T Consensus 782 ~~~~~gsVsaaP~Gsa--~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~ 835 (1001)
T KOG2040|consen 782 DTSPVGSVSAAPWGSA--LILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES 835 (1001)
T ss_pred CCCCccceeccCCCcc--eeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh
Confidence 101 1 111 221 123567999999999999988 788899999999975
No 293
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.36 E-value=1.6e-11 Score=115.78 Aligned_cols=230 Identities=14% Similarity=0.057 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh
Q 017569 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR 172 (369)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~ 172 (369)
.+|-..+...+-+..|+... ....+++.+| +++.+++.+++.+ + ....|++|...|++..+++.
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~----~~~~~vP~atgm~l~l~l~~l~~r-~----------~a~~Viw~ridqkSc~kai~ 119 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSV----KSCFVVPMATGMSLTLCLLALRMR-P----------KAKYVIWPRIDQKSCFKAIE 119 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTH----CEEEEESS-HHHHHHHHHHHHHHH-C----------T--EEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCccc----cceEEEecccccHHHHHHHHHhcc-c----------CCceEEEeeccccchHHHHH
Confidence 44555555556677888741 2245665555 6777777877622 1 13589999999999999999
Q ss_pred hhcceeEEEec--cCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 173 YFEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 173 ~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
..|++++.||. .+|....|.+.+++++++ ++.+.++++.+-..+.. |++++|+++|+++ +++.++.+|
T Consensus 120 ~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~------~IPhlvNnA 193 (389)
T PF05889_consen 120 RAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY------DIPHLVNNA 193 (389)
T ss_dssp HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH------T--EEEEGT
T ss_pred hcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc------CCceEEccc
Confidence 99999999996 345577889999999875 45677788887777876 6699999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQII 326 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l 326 (369)
||..... .......-.+..++|.++-++.|-+++|.|.+.+...++..+ .. ....|.+... ..+.+
T Consensus 194 YgvQ~~~-~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i-~~--vs~~YpGRas----------~sp~l 259 (389)
T PF05889_consen 194 YGVQSSK-CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGI-LA--VSKEYPGRAS----------ASPSL 259 (389)
T ss_dssp TTTT-HH-HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHH-HH--HHHTSHSHBT----------SHHHH
T ss_pred hhhhHHH-HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHH-HH--HHHHhhhhhh----------cccch
Confidence 9963221 111111122256899999999999999999888877654332 11 2345554422 22467
Q ss_pred HHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 327 AQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 327 ~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
-+...|..||..|+... ...++-.++.++|++
T Consensus 260 d~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 260 DLFITLLSLGCTGYGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999988 788888888888865
No 294
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.33 E-value=5.5e-10 Score=109.31 Aligned_cols=253 Identities=13% Similarity=-0.031 Sum_probs=148.9
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.-...... .......++.+.+++++|.+. ..++++|++||..++..++.....+
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~ai~~a~~~~~~~--- 121 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRA--FYNDVFGEFAEYVTKLFGYDK-------VLPMNTGAEAVETAIKLARKWGYKV--- 121 (401)
T ss_pred CCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhcCCCE-------EEEeCccHHHHHHHHHHHHHHhhhh---
Confidence 4678888888776542211111 122333455566888887653 7899999999999999987743211
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHhhhcc------------eeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeC
Q 017569 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILG 211 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~ 211 (369)
.|....+.+|+..... |-+...++...|- ++..+|. -|+++|++++++ +..+|++...
T Consensus 122 ~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~avi~E~v 195 (401)
T TIGR01885 122 KGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY------NNLEALEEALEDHGPNVCAFIVEPI 195 (401)
T ss_pred cCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC------CCHHHHHHHHHhcCCCEEEEEEeCc
Confidence 1111123466655555 5444444443221 1222221 168899998863 4567777778
Q ss_pred CCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeE
Q 017569 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVG 286 (369)
Q Consensus 212 ~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g 286 (369)
.+++|.+.| +++|.++|+++ ++++++|++|.++.. ..........-...|.++++ |.+.++ +..|
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~g~--~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig 265 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCTKH------NVLLIADEIQTGLGR--TGKLLCVDHENVKPDIVLLG--KALSGGVYPVS 265 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHHhhcCCCCCEEEee--ccccCCCCCcE
Confidence 888898866 99999999999 999999999865321 11000111111246877765 877654 5677
Q ss_pred EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
+++.++ +.. ..+.. ... ..+..+. .....++.++|+.+..+++.+ +..++++++++.|++++
T Consensus 266 ~v~~~~-~i~-~~~~~--~~~-----~~t~~~~--p~~~~aa~a~L~~i~~~~l~~-~~~~~~~~~~~~L~~l~ 327 (401)
T TIGR01885 266 AVLADD-DVM-LTIKP--GEH-----GSTYGGN--PLACAVAVAALEVLEEEKLAE-NAEKLGEIFRDQLKKLP 327 (401)
T ss_pred EEEEcH-HHH-hhccC--CCC-----CCCCCCC--HHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHhcc
Confidence 777642 222 22111 010 1121122 222444556677775544443 77778999999999874
No 295
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.29 E-value=4.4e-10 Score=109.05 Aligned_cols=195 Identities=15% Similarity=-0.015 Sum_probs=122.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++.... ......+++.++.+++.+..+.+ ...++++|++|+..++..++..
T Consensus 45 ~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~-------~~~~~~sG~~a~~~A~~~a~~~------ 109 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWHV--SNLFTNSLQEEVASLLAENSAGD-------LVFFCNSGAEANEAALKLARKH------ 109 (377)
T ss_pred CCCHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHhcCCCC-------EEEEeCCcHHHHHHHHHHHHHh------
Confidence 34577888888887653221 12234567778777788776543 2899999999999999977542
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcceeE---EEeccCC-ccc--cCHHHHHHHHhhcCcEEEEeeCCCCcccCC
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELK---EVKLEEG-YYV--MNPVKAVELVDENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~~v~---~v~~~~~-~~~--~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (369)
.| +.+|++.+. .|-+....+...|.... ..|..++ ... -|+++|++.+.+++++|++....++.|...
T Consensus 110 -~g----~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 110 -TG----KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred -cC----CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCcc
Confidence 11 345666654 45443333333332110 1111110 001 178999999988888999988888877653
Q ss_pred ----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 220 ----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 220 ----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
.+++|.++|+++ ++++++|++|.++.. ..........-...|.++ ..|.+++.+..|+++.+
T Consensus 185 ~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~--~g~~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~ 250 (377)
T PRK02936 185 ADPAFLQEVQTLCKKF------GALLIIDEVQTGIGR--TGTLFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGK 250 (377)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhhCCCCcEEE--EcccccCCCccEEEEEc
Confidence 399999999999 999999999976322 110000001111245554 67888766678888764
No 296
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.29 E-value=4.6e-10 Score=106.28 Aligned_cols=245 Identities=12% Similarity=-0.050 Sum_probs=152.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+-++.-++....+ ..+...++.+.|.++.+ .+ ...++++|+|||-.|+..+|...
T Consensus 58 H~hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~la~~L~~~s~~~d-------~vff~NSGaEA~EaAiKlARk~~---- 124 (404)
T COG4992 58 HCHPALVEALKEQAEKLWHVSNLF--YNEPQAELAEKLVELSPFAD-------RVFFCNSGAEANEAALKLARKYT---- 124 (404)
T ss_pred CCCHHHHHHHHHHHHHhhhccccc--CChHHHHHHHHHHhhCcccc-------EEEEcCCcHHHHHHHHHHHHHHc----
Confidence 456888888887665433222122 12233356667888886 43 38999999999999999998752
Q ss_pred HhcCCCCCCCeEEecCCC-cchHHHHHhhh-------cc-----eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 146 KEQGKPYDKPNIVTGANV-QVCWEKFARYF-------EV-----ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~-h~s~~~~~~~~-------G~-----~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+ +.++.+||.-..+ |--..-++... +. +++.+|.+ |+++++++|+++|.+|++---.
T Consensus 125 ---~-~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn------Di~al~~ai~~~taAvivEPIQ 194 (404)
T COG4992 125 ---G-DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN------DIEALEAAIDEDTAAVIVEPIQ 194 (404)
T ss_pred ---C-CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC------CHHHHHHHhccCeEEEEEeccc
Confidence 1 1223466655444 32211111111 11 24445543 7899999999999999988888
Q ss_pred CCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEE
Q 017569 213 TLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (369)
Q Consensus 213 ~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l 288 (369)
-..|.+- -++++.++|+++ |+++|.|++|.|.-.. -.-+.+...--..|.++ .-|-+++....|.+
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~------g~LLI~DEVQtG~GRT--Gk~fA~e~~gV~PDI~t--laK~LgGG~PigA~ 264 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEH------GALLILDEVQTGLGRT--GKLFAYEHYGVEPDILT--LAKALGGGFPIGAM 264 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHh------CeEEEEeccccCCCcc--chHHHHHHhCCCCCEEE--eeccccCCccceee
Confidence 8888773 388999999999 9999999999874331 00001111111357777 67998888999999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH---HHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY---YQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~---~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+.+ +... ..+ ..+.+ ||--+.+++++. ++|..+..+++-+ +..+...+|.++|+++
T Consensus 265 la~-~~~~-~~~------~~G~H------gSTfGGNpLacAv~~a~l~~l~~e~ll~-~v~~~g~~~~~~L~~l 323 (404)
T COG4992 265 LAT-EEIA-SAF------TPGDH------GSTFGGNPLACAVALAVLEVLLEEGLLE-NVREKGEYLLQRLREL 323 (404)
T ss_pred EEc-hhhh-hcC------CCCcc------cCCCCcCHHHHHHHHHHHHHHcchhHHH-HHHHHHHHHHHHHHHH
Confidence 986 2211 111 11111 222222344443 5566666666655 7788888888888874
No 297
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.29 E-value=1.1e-09 Score=106.77 Aligned_cols=251 Identities=10% Similarity=-0.084 Sum_probs=151.6
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
.|.+.+++.+.++...... .....+.+.++.+++.+..+.+ ...++++|+||+..|+..++.... +
T Consensus 54 ~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~-------~v~f~~SGseA~e~Aik~ar~~~~--~--- 119 (395)
T PRK03715 54 NPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHSCFD-------KVFFANSGAEANEGAIKLARKWGR--K--- 119 (395)
T ss_pred CHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhccCCC-------EEEEeCCcHHHHHHHHHHHHHHhh--c---
Confidence 5778888887775432221 1233556667777777654433 389999999999999999876321 0
Q ss_pred CCCCCCCeEEec-CCCcchHHHHHhhhcceeE---EEeccCCcc----ccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC
Q 017569 149 GKPYDKPNIVTG-ANVQVCWEKFARYFEVELK---EVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (369)
Q Consensus 149 g~~~~~~~Vi~s-~~~h~s~~~~~~~~G~~v~---~v~~~~~~~----~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (369)
+ ...+.+|+.. ...|-+...++...|.... ..|.... + .-|+++|++.+.+++.+|++.......|.+-|
T Consensus 120 ~-~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~ 197 (395)
T PRK03715 120 H-KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPG-FPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPA 197 (395)
T ss_pred c-CCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCC-ceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccC
Confidence 0 0112455554 4566666655555443211 1111110 1 24789999999878888888887777777766
Q ss_pred ----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 221 ----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 221 ----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
+++|.++|+++ ++++++|+++.|+-. ...-..+. +.+ ..|.+++ .|.++++...|.++.+++ .
T Consensus 198 ~~~~l~~l~~l~~~~------~~llI~DEv~tG~GR--tG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~-i 265 (395)
T PRK03715 198 TREFMQQLRALTKQH------GLLLIVDEVQTGCGR--TGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAE-V 265 (395)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEccc-c
Confidence 99999999999 999999999886322 00000011 112 3687775 477766666788877653 2
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
. .+ ...+.+ .++ .+. ....++..++|+.+..+++.+ +..++.++|+++|+++
T Consensus 266 ~--~~--~~~~~~---~T~--~g~--pl~~aaala~L~~l~~~~l~~-~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 266 A--VF--EAGDQG---GTY--NGN--PLMTAVGVAVISQLLAPGFLE-GVRARGEYLKEKLLEL 317 (395)
T ss_pred c--cc--cCCCcC---CCC--CCC--HHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHH
Confidence 1 11 111111 111 122 223455557777775544432 8888899999998864
No 298
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.28 E-value=9.8e-10 Score=107.40 Aligned_cols=250 Identities=14% Similarity=-0.037 Sum_probs=146.7
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.+++-......+ ......++.+.++++++.+. ..++++|++|+..|++.++..... +
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~Alk~ar~~~~~-~-- 119 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIGNGY--TNEPVLRLAKKLVDATFADK-------VFFCNSGAEANEAALKLARRYALD-K-- 119 (397)
T ss_pred CCHHHHHHHHHHHHhcccccCcc--CCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh-c--
Confidence 46788888888776422111111 12333455666888776542 899999999999999998764321 1
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.| ..+.+|+..+ ..|-+...++...|.. +..+|. .|+++|++++.+++++|++...++.
T Consensus 120 ~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~aavi~Epi~~~ 191 (397)
T TIGR03246 120 HG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY------NDLAAAKALISDKTCAVIVEPIQGE 191 (397)
T ss_pred CC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC------CCHHHHHHHhccCeEEEEEecccCC
Confidence 01 1234555544 4565544444433321 112221 2789999999888888888866666
Q ss_pred cccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 215 TGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 215 tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
.|.+ ..+++|.++|+++ |+++++|++|.++.. ...-... .+.+ ..|.++ ..|.+++.+..|+++
T Consensus 192 ~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~Gr--~G~~~a~~~~gv-~pDi~t--~~K~lggG~pigav~ 260 (397)
T TIGR03246 192 GGVVPADPAFLKGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDILT--SAKALGGGFPIGAML 260 (397)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--cccchhhhhcCC-CCCEEE--eehhhhCCcceeEEE
Confidence 6644 4599999999999 999999999865422 1000000 1112 467775 467776667788888
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
.++. . .+.+.. .. ...+..+.. ....+..++|..+..+.+.+ +..++.++|+++|++++
T Consensus 261 ~~~~-i-~~~~~~----~~---~~~t~~~~p--~~~aaa~a~l~~~~~~~l~~-~~~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 261 TTTE-I-AAHLKV----GT---HGTTYGGNP--LACAVAGKVLDLVNTPELLA-GVKQRHDLFVDGLEKIN 319 (397)
T ss_pred EcHH-H-HHhccC----CC---cCCCCCCCH--HHHHHHHHHHHHHhhccHHH-HHHHHHHHHHHHHHHHH
Confidence 7542 2 122210 00 011111111 22344445666554433322 77888999999998865
No 299
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.25 E-value=3.9e-10 Score=106.23 Aligned_cols=221 Identities=14% Similarity=0.058 Sum_probs=150.8
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 017569 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (369)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h 164 (369)
.+|+.+.|..+|...+.+.....+..+... ....++|+|.|.++..+++.+.++ ++.|++-..++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~--~wdiiit~G~t~~l~~~l~~~~N~-------------gd~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK--NWDIIITNGNTDGLFKVLRTLINR-------------GDHVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCC--CceEEEecCCchHHHHHHHHhhcC-------------CCceEEecccc
Confidence 456677788888877666444344455421 245899999999999999999885 57999999999
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---------cCcEE-EEeeCCCCcccCCC---HHHHHHHHHHh
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---------NTICV-AAILGSTLTGEFED---VKLLHDLLTKK 231 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---------~~~~v-~~~~~~~~tG~~~~---l~~I~~l~~~~ 231 (369)
.+-...++.+|+.++.|+.|. .-++++.|++.+.. +|.++ .+-.++||||..-. -++|.++|++|
T Consensus 159 ~~AL~s~~a~gv~~ipv~md~--~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy 236 (472)
T KOG0634|consen 159 PSALQSMEALGVKIIPVKMDQ--DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY 236 (472)
T ss_pred hHHHHhccccCceEEeccccC--CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 999999999998877777765 47999999998864 24443 36778999999855 45799999999
Q ss_pred hhccCCCceEEeecccccccccccCC-----Cccc----------------ccc--CCCCcEEEEcCccCCCCCCCeEEE
Q 017569 232 NEETGWDTPIHVDAASGGFIAPFLYP-----DLEW----------------DFR--LPLVKSINVSGHKYGLVYAGVGWV 288 (369)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~-----~~~~----------------~~~--~~~~Dsi~~~~hK~l~~p~g~g~l 288 (369)
++.++.|..|....++-..+ ...+ |.+ +.+.||++ |.+..+.+.|++
T Consensus 237 ------DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFS----KiiaPGlRlG~i 306 (472)
T KOG0634|consen 237 ------DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFS----KIIAPGLRLGWI 306 (472)
T ss_pred ------CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchh----hhhcCcceeEEe
Confidence 99999999988655431111 0001 111 23344444 888766778888
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF 343 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~ 343 (369)
...+ ..+.+-+ ... ..+.+ +.++..-..+++.|+.+|.+|+.++
T Consensus 307 t~~~-~~l~ril----~~a-----e~~t~-~pSg~sq~iv~a~l~~wgqeG~~~w 350 (472)
T KOG0634|consen 307 TGNS-LFLKRIL----DLA-----EVATS-GPSGFSQGIVYAMLKRWGQEGFLRW 350 (472)
T ss_pred ecCH-HHHHHHh----hhc-----ceeec-CcccccHHHHHHHHHHHHHHHHHHH
Confidence 7533 1221111 111 11111 1344456778899999999999877
No 300
>PLN02624 ornithine-delta-aminotransferase
Probab=99.24 E-value=2.2e-09 Score=107.19 Aligned_cols=253 Identities=11% Similarity=-0.046 Sum_probs=144.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++....... .......++.+.++++++.+. ..++++|+||+..|+..++..+..++
T Consensus 91 h~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~AlklAr~~~~~~~- 160 (474)
T PLN02624 91 HCHPKIIKALTEQAEKLTLSSRA--FYNDKFPEFAEYLTSMFGYDM-------VLPMNTGAEGVETAIKLARKWGYEKK- 160 (474)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc--cCCHHHHHHHHHHHhhcCCCe-------EEEeCChHHHHHHHHHHHHHHHHhhc-
Confidence 34688888888887653222111 112233345555777777543 78999999999999998876422211
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccCCccccCHHHHHHHHhh---cCcEEEEee
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAIL 210 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~ 210 (369)
|.+..+.+|+.... .|-....++...|- ++..+|. -|++.|++.++. ++.+|++..
T Consensus 161 --g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~iaaiiiEp 232 (474)
T PLN02624 161 --GIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF------GDLDALEKIFEEDGDRIAAFLFEP 232 (474)
T ss_pred --CCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC------CCHHHHHHHHHhCCCCEEEEEECC
Confidence 11111234554433 34332222222110 1222322 167899998863 467889999
Q ss_pred CCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCe
Q 017569 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGV 285 (369)
Q Consensus 211 ~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~ 285 (369)
+.+++|.+-| +++|.++|+++ ++++++|++|.++.. .......+..-...|.++++ |-++++ +..
T Consensus 233 v~~~~G~v~p~~~~L~~l~~lc~~~------gillI~DEv~tG~Gr--tG~~~a~~~~~i~pDiv~ls--K~lggG~~pi 302 (474)
T PLN02624 233 IQGEAGVVIPPDGYLKAVRELCSKH------NVLMIADEIQTGLAR--TGKMLACDWEEVRPDVVILG--KALGGGVIPV 302 (474)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--CcchhhHHhcCCCCCEEEec--ccccCCCCcc
Confidence 9999998866 99999999999 999999999986321 11101111111246888864 777665 577
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
|+++.++ +.. ..+. .... ..|. +.. .....+.-++|+.+..+++.+ +..++.++|++.|+++
T Consensus 303 gav~~~~-~i~-~~~~--~~~~-----~~T~-~g~-pl~~aaa~aaLe~l~~~~l~~-~~~~~~~~l~~~L~~l 364 (474)
T PLN02624 303 SAVLADK-DVM-LCIK--PGEH-----GSTF-GGN-PLASAVAMAALQVVQDEKLAE-RSAKLGQELRDQLQKI 364 (474)
T ss_pred eeeeecH-HHH-hHhc--cCCc-----CCCC-CCC-HHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHH
Confidence 8887753 222 1111 0000 1111 111 122344445566555444333 6667788888888764
No 301
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.20 E-value=4.2e-09 Score=103.15 Aligned_cols=251 Identities=11% Similarity=-0.078 Sum_probs=139.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++....... .......++.+.++++.+.+. ..++++|++|+..++..++..... +
T Consensus 56 h~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~sGseA~e~a~klar~~~~~-~- 124 (403)
T PRK05093 56 HCHPALVKALKEQGEKLWHISNV--FTNEPALRLAKKLIDATFAER-------VFFANSGAEANEAAFKLARRYACD-R- 124 (403)
T ss_pred CCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHhhCCCCE-------EEEeCchHHHHHHHHHHHHHHHhh-c-
Confidence 34577888888877642211111 112223355566777765543 899999999999999988764321 0
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhc-------c-----eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFE-------V-----ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G-------~-----~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+ ...+..|+. ....|-+...+....| . ++..+|. -|++++++.+.+++++|++. |.+
T Consensus 125 --~-~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~aaiiie-p~~ 194 (403)
T PRK05093 125 --H-GPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF------NDLAAVKAVIDDHTCAVVVE-PIQ 194 (403)
T ss_pred --C-CCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC------CCHHHHHHHhcCCeEEEEEe-ccc
Confidence 0 012344554 4455655443333211 1 1222221 17899999998888888877 666
Q ss_pred CcccC-----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEE
Q 017569 214 LTGEF-----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (369)
Q Consensus 214 ~tG~~-----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l 288 (369)
++|.+ +.+++|.++|+++ ++++++|++|.++.. ..........-...|..+ ..|.+++.+..|++
T Consensus 195 ~~gg~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~~pdi~s--~sK~l~~G~rig~v 264 (403)
T PRK05093 195 GEGGVIPATPEFLQGLRELCDQH------NALLIFDEVQTGMGR--TGDLFAYMHYGVTPDILT--SAKALGGGFPIGAM 264 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchhhhhcCCCCCEEE--ecccccCCcceEEE
Confidence 66654 2399999999999 999999999986432 111001111111245444 45888777889999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
+.++. .. +.+.. .. ...+. +.. .....+...+|+.+..+.+.+ +..++.+++.+.|++++
T Consensus 265 v~~~~-i~-~~l~~----~~---~~~t~-~~~-~~~~~aa~a~L~~~~~~~~~~-~~~~~~~~l~~~L~~~~ 324 (403)
T PRK05093 265 LTTAE-IA-SHFKV----GT---HGSTY-GGN-PLACAVAEAVFDIINTPEVLE-GVKARRQRFVDGLQKIN 324 (403)
T ss_pred EEcHH-HH-hhcCC----CC---CCCCC-CCC-HHHHHHHHHHHHHHhhccHHH-HHHHHHHHHHHHHHHHH
Confidence 87542 21 22110 00 01111 111 111222334444543222221 67778888888888764
No 302
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=3.1e-10 Score=105.45 Aligned_cols=160 Identities=13% Similarity=0.067 Sum_probs=128.4
Q ss_pred HHHHHHHHhcc---CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 72 CDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 72 v~~~~~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+.+...+.++. ..+.|..+.+..-+++.+.+.+.+.=|.+.+. ..+..|+|++.|+...+..+...
T Consensus 91 ai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p---~dI~LT~GAS~ai~~il~l~~~~-------- 159 (475)
T KOG0258|consen 91 AIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADP---EDIFLTTGASPAIRSILSLLIAG-------- 159 (475)
T ss_pred HHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCH---HHeeecCCCcHHHHHHHHHHhcC--------
Confidence 33433444443 34556677899999999999999998855432 45899999999998877776542
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccC---C
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF---E 219 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~---~ 219 (369)
.++-|++|-|-|+-|...+..+|...+..-+|+ .+|.+|.++|++.+++ +++++++..|.||||.+ .
T Consensus 160 ----~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e 235 (475)
T KOG0258|consen 160 ----KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEE 235 (475)
T ss_pred ----CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHH
Confidence 246799999999999998999998877666765 5799999999999876 57888888999999998 6
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
.+++|..+|+++ ++.++.|++|-.-+.
T Consensus 236 ~ie~i~~fa~~~------~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 236 NIEGIICFAAEE------GLVLLADEVYQDNVY 262 (475)
T ss_pred HHHHHHHHHHHc------CeEEechHHHHhhcc
Confidence 799999999999 999999999876554
No 303
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.20 E-value=1.7e-09 Score=106.66 Aligned_cols=192 Identities=13% Similarity=-0.045 Sum_probs=116.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++........++...+ +++.+++.+... ....+++||+||+..|++.++...
T Consensus 64 h~~p~v~~ai~~q~~~~~~~~~~~~~~~~----lae~l~~~~~~~------~~v~~~~sGseA~e~Alk~ar~~~----- 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGTSYGAPTEAEIL----LAKEIISRVPSV------EMVRFVNSGTEATMSAVRLARGYT----- 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcCCCCCHHHHH----HHHHHHHhCCcc------cEEEEeCCHHHHHHHHHHHHHHhh-----
Confidence 45688888888888764432223334444 444466665432 138999999999999999987641
Q ss_pred hcCCCCCCCeEEecCCCcchHHH-HHhhh--cceeEEEeccC--------Cccc---cCHHHHHHHHh---hcCcEEEEe
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEK-FARYF--EVELKEVKLEE--------GYYV---MNPVKAVELVD---ENTICVAAI 209 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~-~~~~~--G~~v~~v~~~~--------~~~~---~d~~~L~~~i~---~~~~~v~~~ 209 (369)
| +++|+...++|..+.. ..... |......+..+ +... -|+++|+++++ +++++|++.
T Consensus 129 --g----r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e 202 (423)
T TIGR00713 129 --G----RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE 202 (423)
T ss_pred --C----CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence 1 4678777766554322 22111 11100001000 0001 17899999997 456777775
Q ss_pred -eCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccCCCCCC
Q 017569 210 -LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYA 283 (369)
Q Consensus 210 -~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~ 283 (369)
.+++ +|.+.+ +++|.++|+++ ++++++|++|.++-.. ..... .+.+ ..|.+ ...|.+.+.+
T Consensus 203 p~~~~-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~r~g---~~~~~~~~~~-~pDi~--t~sK~l~~G~ 269 (423)
T TIGR00713 203 PVAGN-MGVVPPKPEFLAGLRALTEEY------GSLLIFDEVMTGFRVA---LGGAQEYFGV-EPDLT--TLGKIIGGGL 269 (423)
T ss_pred CCCCC-CCCcCCCHHHHHHHHHHHHHh------CCEEEEEccccccccC---cchhHHHhCC-Ccchh--hhhhhhcCCC
Confidence 5555 687755 89999999999 9999999999765321 10011 1111 23544 3678887667
Q ss_pred CeEEEEEeC
Q 017569 284 GVGWVVWRT 292 (369)
Q Consensus 284 g~g~l~~~~ 292 (369)
..|+++.++
T Consensus 270 pig~v~~~~ 278 (423)
T TIGR00713 270 PVGAFGGRR 278 (423)
T ss_pred ceeeeeEHH
Confidence 789888754
No 304
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.19 E-value=1.3e-09 Score=101.58 Aligned_cols=250 Identities=12% Similarity=-0.028 Sum_probs=158.9
Q ss_pred CChHHHHHHHHHHhccCCCCCC-------CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMD-------EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~-------~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
..+|.+.+++.+.++......+ .+.-...||++ |++|-+-+. ..+.++.=-||-..+..+..
T Consensus 185 s~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~a-------ALlFsSCfVANDstLftLak 253 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEA-------ALLFSSCFVANDSTLFTLAK 253 (570)
T ss_pred cCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcc-------eeeeeeeeeccchHHHHHHH
Confidence 3458899999998876432221 12233455555 899888774 34444555566555555544
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCc
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLT 215 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~t 215 (369)
.+ .+-+|+..+--|.|+...++.-++.=.... -+ |+++|+++++. .|++|........+
T Consensus 254 ~l-----------pgcei~SD~gNHASMI~GIrns~v~K~IFr--HN----D~~hL~~lL~~~~~svPKivAFEtVhSM~ 316 (570)
T KOG1360|consen 254 KL-----------PGCEIFSDEGNHASMIQGIRNSRVPKHIFR--HN----DLDHLEQLLQSSPKSVPKIVAFETVHSMD 316 (570)
T ss_pred HC-----------CCcEEeccccchHHHHHHhhhcCCcceeec--cC----CHHHHHHHHHhCCCCCCceEEEeeeeccC
Confidence 32 123444445568888777776665433222 22 78899998875 47999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
|.+.|+++|++++++| |....+|+++.-+.+.--. .-...+--+..+|.|+....|.+++-. |.+. ..+.
T Consensus 317 GavcpleelcDvah~y------GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG--GYIA-at~~ 387 (570)
T KOG1360|consen 317 GAVCPLEELCDVAHKY------GAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG--GYIA-ATRK 387 (570)
T ss_pred CCcCCHHHHHHHHHHh------CceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc--ceeh-hhhh
Confidence 9999999999999999 9999999987655541000 000011125578999988888875433 3443 3333
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh-cHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l-g~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
+..-.-+..+.|+... |-+-.-...+..+.+.+ ..||...+ .++.+.+|++|.|.+.|+
T Consensus 388 LvDmiRSyAaGFIFTT--------SLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~Gi 448 (570)
T KOG1360|consen 388 LVDMIRSYAAGFIFTT--------SLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGI 448 (570)
T ss_pred HHHHHHHhcCceEEec--------CCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3311111234444332 22222244555777777 66788877 899999999999999885
No 305
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.18 E-value=3.4e-09 Score=100.35 Aligned_cols=221 Identities=16% Similarity=0.107 Sum_probs=138.7
Q ss_pred hHHHHHHHHHHhccCC-CCCCCCcc--hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMASINKNY-VDMDEYPV--TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~-~~~~~~~~--~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
.+++.+++...++... ..+....+ ..++. .+.+.+..+.|... +.+++..+.|++..+.++..
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~aea-------~~ivnnn~aAVll~~~al~~------ 105 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCGLTGAEA-------AAIVNNNAAAVLLTLNALAE------ 105 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhcccchhh-------eeeECCcHHHHHHHHhhhcc------
Confidence 4667777776665432 12222111 11221 33333444444443 78888877777666665532
Q ss_pred HhcCCCCCCCeEEecC-----CCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC--
Q 017569 146 KEQGKPYDKPNIVTGA-----NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-- 218 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~-----~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-- 218 (369)
+.+|+++- ..|+.+...+++.|++++++... .+....+++.+|.+++.++.-++.+|. |..
T Consensus 106 --------~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~ 173 (395)
T COG1921 106 --------GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---NRTHLKDYELAINENTALLLKVHSSNY-GFTGM 173 (395)
T ss_pred --------CCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---CcCCHHHHHHHhccCCeeEEEEeeccc-ccccc
Confidence 12444321 58899999999999998877653 467889999999999988776666654 433
Q ss_pred CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
-++++++++||++ ++++++|.+.|..+- +++...-. ..|+|.+++|++|.+++|. +|+++.|+ ++.
T Consensus 174 l~~~~l~~ia~~~------~lpvivD~aSg~~v~----~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkK-elI- 240 (395)
T COG1921 174 LSEEELVEIAHEK------GLPVIVDLASGALVD----KEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKK-ELI- 240 (395)
T ss_pred ccHHHHHHHHHHc------CCCEEEecCCccccc----cccchhHHHhcCCCEEEEecchhcCCCc-cceEechH-HHH-
Confidence 4788899999999 999999999886432 22111111 4589999999999998888 68777653 443
Q ss_pred cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH
Q 017569 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (369)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~ 337 (369)
+.++..+-.. .+...+. ..+++.++|+.+-.
T Consensus 241 ~~lq~~~l~R-------alrv~K~--tla~l~~aLe~y~~ 271 (395)
T COG1921 241 EKLQSHPLKR-------ALRVDKE--TLAALEAALELYLQ 271 (395)
T ss_pred HHHHhhhhhh-------hhhcCcH--hHHHHHHHHHHHcC
Confidence 2222111110 1111221 35777788888754
No 306
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.13 E-value=1.1e-08 Score=100.38 Aligned_cols=255 Identities=11% Similarity=-0.086 Sum_probs=143.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.-...... .......++.+.++++++.+ ...++++|+||+..+++.++..... +
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~e~Alk~ar~~~~~-~-- 123 (406)
T PRK12381 56 AHPALREALNEQASKFWHTGNG--YTNEPVLRLAKKLIDATFAD-------RVFFCNSGAEANEAALKLARKYAHD-R-- 123 (406)
T ss_pred CCHHHHHHHHHHHhhcccccCc--cCCHHHHHHHHHHHhhCCCC-------eEEEcCCcHHHHHHHHHHHHHHHhh-c--
Confidence 3577888888877642211111 11222334556677776654 3899999999999999998764321 1
Q ss_pred cCCCCCCCeEEecCC-CcchHHHHHhhhcceeE---EEeccCC---ccccCHHHHHHHHhhcCcEEEEeeCCCCcccC--
Q 017569 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGEF-- 218 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-- 218 (369)
+ ...+.+|+..+. .|-....++...|.... +.|+.++ -...|+++|++.+++++.+|++. |.+++|.+
T Consensus 124 -~-~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~ 200 (406)
T PRK12381 124 -Y-GSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQGEGGVIP 200 (406)
T ss_pred -C-CCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcCCCCCcC
Confidence 1 012345665554 44443333333231100 0111000 01237899999998777777765 77777753
Q ss_pred ---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 219 ---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
+.+++|.++|+++ ++++++|++|.++.. ...-..+ .+.+ ..|.++ ..|.+++.+..|+++.+++
T Consensus 201 ~~~~~l~~l~~l~~~~------~~llI~DEv~tG~gr--~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~~~~~~~- 268 (406)
T PRK12381 201 ADKAFLQGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDVLT--TAKALGGGFPIGAMLTTEK- 268 (406)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEcchhhCCCC--CcchhhhHhhCC-CCCEEE--ehhhhhCCCceEEEEEcHH-
Confidence 5699999999999 999999999865422 1110011 1111 356554 5688877788899887532
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
.. ..+.. .. ...+. +.. .....++.++|+.+..+.+.+ +..++.+++++.|++++
T Consensus 269 ~~-~~~~~------~~-~~~t~-~~~-pl~~aaa~a~l~~l~~~~~~~-~~~~~~~~l~~~L~~l~ 323 (406)
T PRK12381 269 CA-SVMTV------GT-HGTTY-GGN-PLASAVAGKVLELINTPEMLN-GVKQRHDWFVERLNTIN 323 (406)
T ss_pred HH-hhcCC------CC-CCCCC-CCC-HHHHHHHHHHHHHHhhccHHH-HHHHHHHHHHHHHHHHH
Confidence 21 22110 00 01111 111 122344445555554333222 77788889999888764
No 307
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.12 E-value=2e-09 Score=96.97 Aligned_cols=229 Identities=16% Similarity=0.139 Sum_probs=144.1
Q ss_pred HHHHHHHHHHhhhhcCCCCccccccccCCChHHH----HHHHHHHhc-----cCCCCCCCCcchHHHHHHHHHHHHHHhC
Q 017569 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPEC----DKLVMASIN-----KNYVDMDEYPVTTELQNRCVNMIAHLFN 109 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v----~~~~~~~~~-----~n~~~~~~~~~~~~le~~~~~~la~l~g 109 (369)
..++++++.+-+.-.+ ..+|+++.|...| ++ .+...+.+. ++..+|+..++-..|.+++..++.+-+|
T Consensus 16 i~~lMdDl~d~Lrt~g--~imLggGNPa~iP-em~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPG--AIMLGGGNPARIP-EMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCC--ceeeCCCCcccCh-hHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 4556666655543222 3566776665443 33 333333332 2445667777888999999999999999
Q ss_pred CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec-CCCcchHHHHHhhhc----ce--eEEEe
Q 017569 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARYFE----VE--LKEVK 182 (369)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G----~~--v~~v~ 182 (369)
++-.. .++..|+|+..+.++.+-.+.-+. ..| ...+|+.| .|.|..|..++-.-. .+ +..+|
T Consensus 93 wnit~---~NIalTnGSQs~fFYlfNlF~G~~-----sdG---~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~ 161 (417)
T COG3977 93 WNITA---QNIALTNGSQSAFFYLFNLFAGRR-----SDG---TEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLP 161 (417)
T ss_pred CCCcc---ceeeecCCccchHHHHHHHhcCcc-----CCC---cceeEeeccChhhccccccccCccceeeccCCccccc
Confidence 98643 458999999999988777653321 111 12256665 555555443321110 01 11112
Q ss_pred ccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc
Q 017569 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (369)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (369)
-..-.+++|.++|. +.+.+-+|+++-|+||||.+ +.+.+|.++|+++ ++++++|.|||-..-...-.+.
T Consensus 162 ~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~------giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 162 AGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH------GIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred ccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc------CCcEEEecccCCCCCceecccc
Confidence 11113688888885 66888999999999999998 4688899999999 9999999999853211000111
Q ss_pred cccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 260 ~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
...+. .=-..+.|..|.+.....||+++..
T Consensus 234 ~~~w~--~NiilC~SLSK~GLPG~R~GIiIan 263 (417)
T COG3977 234 TPLWN--ENIILCMSLSKLGLPGSRCGIIIAN 263 (417)
T ss_pred cccCC--CCEEEEeehhhcCCCCcceeEEEcc
Confidence 11111 1234577888999888999998864
No 308
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.09 E-value=1.6e-08 Score=98.08 Aligned_cols=244 Identities=12% Similarity=-0.043 Sum_probs=140.1
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
.|.+.+++.+.+......+ +.....++.+ +++.++... .....++++|++|+..++..++.. .
T Consensus 46 ~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~----la~~l~~~~----~~~~~~~~SGseA~~~Al~~ar~~-------~ 108 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHSP--NLYLNSLQEE----VAQKLIGDK----DYLAFFCNSGAEANEAAIKIARKA-------T 108 (375)
T ss_pred CHHHHHHHHHHHHhcCccc--CccCCHHHHH----HHHHHhcCc----CCEEEEcCccHHHHHHHHHHHHHh-------c
Confidence 5678888888876543322 2223445555 444332222 123689999999999999998653 1
Q ss_pred CCCCCCCeEEec-CCCcchHHHHHhhhccee---------EEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC
Q 017569 149 GKPYDKPNIVTG-ANVQVCWEKFARYFEVEL---------KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (369)
Q Consensus 149 g~~~~~~~Vi~s-~~~h~s~~~~~~~~G~~v---------~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (369)
++.+|++. ...|-+...++...|... ..++... ..|++++++.+.+++.+|++..+++++|.+
T Consensus 109 ----~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 109 ----GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI---FNDLNSVKALVNKNTAAVMLELVQGESGVL 181 (375)
T ss_pred ----CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC---CCCHHHHHHhcCCCeEEEEECCeECCCCCc
Confidence 13466665 445655555544333221 1111110 238899999988788889999999999987
Q ss_pred CC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 219 ED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 219 ~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
.+ +++|.++|+++ ++++++|++|.++.. ..........-...|.+ +..|.+.+....|+++.++.
T Consensus 182 ~~~~~~l~~~~~l~~~~------~~~~i~De~~~g~g~--~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~- 250 (375)
T PRK04260 182 PADKDFVKALADYCQET------GILLIVDEVQTGMGR--TGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSS- 250 (375)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHH-
Confidence 44 89999999999 999999999976322 11100111111134544 46898865567899988642
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
.. ..+. +.. ...+..++ .....++.++|+.+..+++.+ +..+..+++++.|.+
T Consensus 251 ~~-~~~~----~~~---~~~t~~~~--~~~~~aa~a~l~~~~~~~~~~-~~~~~~~~~~~~l~~ 303 (375)
T PRK04260 251 LG-GAFG----YGS---HGSTFGGN--KLSMAAASATLDIMLTAGFLE-QALENGNYLQEQLQK 303 (375)
T ss_pred HH-hhcC----CCC---CCCCCCcC--HHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHH
Confidence 21 2211 100 01111112 222444445565555444433 555556666665544
No 309
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.01 E-value=1e-07 Score=95.57 Aligned_cols=267 Identities=15% Similarity=-0.015 Sum_probs=144.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.............+.+.++.+.|.+++.-.. .....++++|+||+..|++.++..+..
T Consensus 105 h~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~SGsEA~e~AlKlAr~~~~~--- 177 (504)
T PLN02760 105 GSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK----MGKVFFTNSGSEANDTQVKLVWYYNNA--- 177 (504)
T ss_pred CCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC----CCEEEEeCChHHHHHHHHHHHHHHHHh---
Confidence 4468888888888865432211112234445556666777653211 124788999999999999999764321
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhcce------------eEEEeccCCccc-------------cCHHHHHHHHh
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVE------------LKEVKLEEGYYV-------------MNPVKAVELVD 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~-------------~d~~~L~~~i~ 200 (369)
.|... +.+||. ....|-+...++.+.|.. +..++... .++ ...++|++.+.
T Consensus 178 -~g~~~-r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~le~~l~ 254 (504)
T PLN02760 178 -LGRPN-KKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH-YWRFHLPGETEEEFSTRLADNLENLIL 254 (504)
T ss_pred -cCCCC-CcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc-ccccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 12111 345554 445666554444433321 22222211 011 11245777664
Q ss_pred ----hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEE
Q 017569 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSI 271 (369)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi 271 (369)
++..+|++.-.....|.+.| +++|.++|+++ |+++|+|+++.|+-. ...-..++ +.+ ..|.+
T Consensus 255 ~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~TGfGR--tG~~~a~e~~gv-~PDiv 325 (504)
T PLN02760 255 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY------DILFIADEVICAFGR--LGTMFGCDKYNI-KPDLV 325 (504)
T ss_pred hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEecchhhCCcc--cchhhHHHhcCC-CCcEE
Confidence 23456666655556677777 99999999999 999999999855422 11111111 112 36776
Q ss_pred EEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 272 NVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 272 ~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
+ ..|.+++.+ +.|.+++++ +.. +.+.......+......|..|. ....++..++|+.+..+++.+ +..++.+
T Consensus 326 t--lgK~lggG~~PigAv~~~~-~i~-d~~~~~~~~~~~~~h~~T~~gn--Pl~~Aaala~Le~i~~~~l~~-~~~~~g~ 398 (504)
T PLN02760 326 S--LAKALSSAYMPIGAVLVSP-EIS-DVIHSQSNKLGSFAHGFTYSGH--PVSCAVALEALKIYKERNIPE-HVNKIAP 398 (504)
T ss_pred E--ecccccCCccccceEeecH-HHH-hhhhcccccccCcccCCCCCCC--HHHHHHHHHHHHHHHhCCHHH-HHHHHHH
Confidence 6 578876643 456677653 222 2221110100000001122221 122344446666665554422 8889999
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
+|++.|+++
T Consensus 399 ~l~~~L~~l 407 (504)
T PLN02760 399 RFQDGIKAF 407 (504)
T ss_pred HHHHHHHHH
Confidence 999999874
No 310
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.00 E-value=1.2e-07 Score=92.94 Aligned_cols=259 Identities=10% Similarity=-0.072 Sum_probs=142.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-.+.... ...+...++.+.|.++.+.. ....++++|+||+..|++.++..+..
T Consensus 56 h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~L~~~~~~~------~~v~f~~sGseA~e~AlklAr~~~~~--- 124 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLWHTSNV--FYSAPPLKLAEELVTASRFA------EKVFLCNSGTEANEAAIKLVRKWASS--- 124 (408)
T ss_pred CCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhCCCC------CEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 44677888888877643222111 12233345566677665321 24899999999999999999875321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcceeEE---EeccCC-c--cccCHHHHHHHHhhcCcEEEEeeCCCCcccCC
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELKE---VKLEEG-Y--YVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~~v~~---v~~~~~-~--~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (369)
.|.+.++.+|+.-.. .|-....++...|-.... -|...+ . -..|++.+++++.+++...++.-|.+.+|.+.
T Consensus 125 -~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~ 203 (408)
T PRK04612 125 -QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVM 203 (408)
T ss_pred -hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCc
Confidence 121112345665444 444333333322211100 011000 0 01278999999876666666677777777552
Q ss_pred -----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 220 -----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 220 -----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
-+++|.++|+++ ++++++|++|.++... ..-......-...|.++ ..|.+++.+..|+++.+++
T Consensus 204 ~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr~--G~~~a~~~~~~~pdi~t--~~K~l~~G~piga~~~~~~- 272 (408)
T PRK04612 204 PAAPGFLARVRALCDQH------DALLVLDEIQCGMGRT--GTLFAHWQEQVTPDIVT--LAKALGGGFPIGAMLAGPK- 272 (408)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC--CchhhhhhcCCCCCEEE--EcchhcCCCceEEEEECHH-
Confidence 289999999999 9999999999864321 00000000011345555 4688776677888887532
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
.. +.+.. . . ...+..+. .....+..++|+.+..+++.+ +..++.++|+++|+++
T Consensus 273 ~~-~~~~~-~---~---~~~t~~~~--p~~~aaa~a~L~~~~~~~l~~-~~~~~g~~l~~~l~~l 326 (408)
T PRK04612 273 VA-ETMQF-G---A---HGTTFGGN--PLAAAVARVALRKLASPQIAA-NVARQSAALRAGLEAL 326 (408)
T ss_pred HH-hhhcC-C---C---cCCCCCCC--HHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHH
Confidence 21 22111 0 0 11121122 222344445666665444322 7888888888888764
No 311
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.98 E-value=4.2e-08 Score=96.80 Aligned_cols=245 Identities=14% Similarity=-0.004 Sum_probs=139.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.....+. ....+.++++++.+++.- . ....++++|+||+..++..++...
T Consensus 66 h~~p~i~~a~~~~~~~~~~~~~----~~~~~~~la~~L~~~~~~-~-----~~v~~~~sGseA~e~Aik~a~~~~----- 130 (426)
T PRK00062 66 HAHPEVVEAVIEAAEKGLSFGA----PTELEVELAELVIELVPS-I-----EMVRMVNSGTEATMSAIRLARGYT----- 130 (426)
T ss_pred CCCHHHHHHHHHHHHhCCcCCC----CCHHHHHHHHHHHHhCCC-C-----CEEEEecCHHHHHHHHHHHHHHHh-----
Confidence 3457788888888765322111 223444666677776531 1 137899999999999999987641
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHH-hhhc-------ce-----eEE-----EeccCCccccCHHHHHHHHhh---cCcE
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFA-RYFE-------VE-----LKE-----VKLEEGYYVMNPVKAVELVDE---NTIC 205 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~-~~~G-------~~-----v~~-----v~~~~~~~~~d~~~L~~~i~~---~~~~ 205 (369)
| +.+|+..+.+|......+ ...| .. .+. +.+. .-|++++++.+.+ ++.+
T Consensus 131 --g----~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~~~~~~aa 200 (426)
T PRK00062 131 --G----RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP----YNDLEAVEELFEEYGDEIAA 200 (426)
T ss_pred --C----CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC----CCCHHHHHHHHHhCCCcEEE
Confidence 1 356776665554433211 1111 00 010 1111 1278999998864 5567
Q ss_pred EEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccCCC
Q 017569 206 VAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 206 v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~ 280 (369)
|++......+|.+-| +++|.++|+++ ++++++|++|.++-. ....... +.+ ..|.++ ..|.++
T Consensus 201 iivEpv~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~G~r~---g~~~~~~~~~~-~pDi~~--~gK~l~ 268 (426)
T PRK00062 201 VIVEPVAGNMGVVPPKPGFLEGLRELCDEH------GALLIFDEVMTGFRV---ALGGAQGYYGV-TPDLTT--LGKIIG 268 (426)
T ss_pred EEEeCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeechhcccc---CCccHHHHhCC-CcchHh--hhhHhh
Confidence 777755666788877 99999999999 999999999986522 1100011 111 235433 568877
Q ss_pred CCCCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+.+..|+++.++ +.. ..+... ..+... |..+. .....+..++|+.+..+.+.+ +..++.++++++|++
T Consensus 269 ~G~p~ga~~~~~-~i~-~~~~~~~~~~~~~-----T~~~~--p~~~aaa~a~L~~~~~~~~~~-~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 269 GGLPVGAFGGRR-EIM-EQLAPLGPVYQAG-----TLSGN--PLAMAAGLATLKLLKEPGFYE-ELEALTKRLAEGLKE 337 (426)
T ss_pred CCCcceeeeEHH-HHH-HhhccCCCceecc-----cCcCC--HHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHH
Confidence 667678776643 222 222110 011110 11111 122344446666665442222 777788888888874
No 312
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.98 E-value=1.6e-07 Score=92.59 Aligned_cols=266 Identities=8% Similarity=-0.082 Sum_probs=142.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-..... .....+.+.++.+.+.+++.... ....++++|+||+..|++.+|..+..+
T Consensus 58 h~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseA~e~A~klar~~~~~~-- 129 (423)
T PRK05964 58 HNHPYIDQAIREQLDRLDHVIF-AGFTHEPAERLAQRLVALTPGGL-----DHVFFSDSGSVAVEVALKMALQYWRNR-- 129 (423)
T ss_pred CCCHHHHHHHHHHHhhCCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 4458888888888765322111 01123344566777888764221 248999999999999999998753221
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHhhhc------------ceeEEEeccCC-ccccCHHHHHHHHhh---cCcEEEEe
Q 017569 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEG-YYVMNPVKAVELVDE---NTICVAAI 209 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~-~~~~d~~~L~~~i~~---~~~~v~~~ 209 (369)
|. ..+.+|+.-..+ |-....++...+ ..+..++...+ ....++++|++.+.+ +..+|++.
T Consensus 130 --~~-~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~E 206 (423)
T PRK05964 130 --GE-PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVE 206 (423)
T ss_pred --CC-CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 11 123466654444 432222222111 12334444321 112337888888863 33455554
Q ss_pred e-CCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-C
Q 017569 210 L-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-A 283 (369)
Q Consensus 210 ~-~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~ 283 (369)
- .....|..- .+++|.++|+++ ++++++|+++.++... ..-..+...-...|.+++ .|+++++ .
T Consensus 207 p~i~~~gG~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr~--G~~~a~~~~~v~pDi~~~--~K~l~gG~~ 276 (423)
T PRK05964 207 PLVQGAGGMLFYDPRYLAELRRICDRH------GVLLIFDEIATGFGRT--GTLFACEQAGVSPDIMCL--SKGLTGGYL 276 (423)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcC--cchhHHHhcCCCCCeeee--ehhhhcCcc
Confidence 3 255556553 499999999999 9999999998654221 000011111124677665 4998777 5
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+.|+++.++ +.. +.+........... ..|. +-+....++..++++.+..+++.+ +..++.+++++.|+++
T Consensus 277 p~~av~~~~-~i~-~~~~~~~~~~~~~~-~~T~--~~np~~~aaa~a~l~~l~~~~~~~-~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 277 PLAATLCTA-EIF-EAFYSDDRAKAFMH-SPSY--TANPLACAAANASLDLFEDEPVLE-RVAALSAGLAEGLEPF 346 (423)
T ss_pred cceEEEEcH-HHH-HhhhcCCccccccc-CCCC--CcCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHhh
Confidence 778877643 222 22211000000000 0011 111222344445566665444322 8888899999999876
No 313
>PRK12403 putative aminotransferase; Provisional
Probab=98.98 E-value=8.9e-08 Score=95.27 Aligned_cols=261 Identities=13% Similarity=0.015 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++............+...++.+.++++++.+. ....++++|+||+..|++.++..+..
T Consensus 70 h~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AiklAr~~~~~--- 141 (460)
T PRK12403 70 YGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-----SHAIYTNSGSEANEVLIRTVRRYWQV--- 141 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 3457888888888865332211112233445566667888876332 23899999999999999999875321
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhcce-----------eEEEeccCCcc----c--------cCHHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVE-----------LKEVKLEEGYY----V--------MNPVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G~~-----------v~~v~~~~~~~----~--------~d~~~L~~~i~-- 200 (369)
.|.+ .+.+|+. ....|-+...++..-|.. +..+|... .+ . .+.++|++.+.
T Consensus 142 -~g~~-~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~le~~~~~~ 218 (460)
T PRK12403 142 -LGKP-QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPY-WYANGGELTPAEFGRRAALQLEEKILEL 218 (460)
T ss_pred -hCCC-CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCc-ccccccCCChHHHHHHHHHHHHHHHHHh
Confidence 1211 1233443 344566555444443322 23333110 00 0 12355666653
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEE
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINV 273 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~ 273 (369)
++..+|++.......|.+.| +++|.++|+++ ++++++|++++++-. ...-..++ +.+ ..|.++
T Consensus 219 ~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--tG~~~a~e~~gv-~PDiv~- 288 (460)
T PRK12403 219 GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY------DVLLCADEVIGGFGR--TGEWFAHEHFGF-EPDTLS- 288 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhhhhhcCC-CCCeEE-
Confidence 23456666665556677766 99999999999 999999999976422 00000111 112 257777
Q ss_pred cCccCCCCCC-CeEEEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhh-HHHH
Q 017569 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCV-DHKK 350 (369)
Q Consensus 274 ~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~-~~a~ 350 (369)
..|.+++.+ ..|.++++++ .. +.+.... .|.- ..|..+ +....++..++|+.+..+++.+ +.. ++.+
T Consensus 289 -~gK~lggG~~Piga~v~~~~-i~-~~~~~~~~~~~~----~~T~~g--nPl~~Aaala~L~~i~~~~l~~-~~~~~~g~ 358 (460)
T PRK12403 289 -IAKGLTSGYVPMGGLVLSKR-IA-EALVEQGGVFAH----GLTYSG--HPVAAAVAIANLKALRDEGVVT-RVKDDTGP 358 (460)
T ss_pred -EcccccccccceEEEEECHH-HH-HHHhcCCCcccc----CCCCCC--CHHHHHHHHHHHHHHHhccHHH-HHHHHHHH
Confidence 578877664 6677777532 21 2221110 1110 011111 1222444556677776655422 664 7888
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 359 ~l~~~L~~ 366 (460)
T PRK12403 359 YLQRCLRE 366 (460)
T ss_pred HHHHHHHH
Confidence 88888865
No 314
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.97 E-value=2.3e-07 Score=91.83 Aligned_cols=253 Identities=11% Similarity=-0.086 Sum_probs=143.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++....... ....+.+.++.+.|.++++... ....++++|+||+..|++.++...
T Consensus 57 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~t----- 125 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAPGDN-----PKVSFGLSGSDANDGAIKFARAYT----- 125 (443)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCCC-----CEEEEcCCHHHHHHHHHHHHHHhc-----
Confidence 44678888888887653322111 1123344466667887765432 248999999999999999987641
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhcc------------eeEEEeccCC---ccc--------cCHHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG---YYV--------MNPVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~--------~d~~~L~~~i~-- 200 (369)
| +.+|+.-. ..|-....+....|. ++..+|.... .+. -+++.+++.+.
T Consensus 126 --g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (443)
T PRK08360 126 --K----RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE 199 (443)
T ss_pred --C----CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc
Confidence 1 34555543 334332222222221 2344443210 010 23455666664
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN 272 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~ 272 (369)
+++.+|++.-..+++|.+.+ +++|.++|+++ ++++++|++|.++.. ....... .+.+ ..|.++
T Consensus 200 ~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr--~G~~~a~~~~~~-~pDiit 270 (443)
T PRK08360 200 VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH------GILLVVDEVQSGLGR--TGKWFAIEHFGV-EPDIIT 270 (443)
T ss_pred cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CccchhhhhcCC-CCCEEE
Confidence 35677877766688897744 99999999999 999999999986432 1110011 1111 346666
Q ss_pred EcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHH
Q 017569 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLS 352 (369)
Q Consensus 273 ~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l 352 (369)
+ .|.+++.+..|+++.+.+ .. ..+.. .. ...+..+.. ....+..++|+.+..+++.+ +..++.++|
T Consensus 271 l--sK~l~~G~pigav~~~~~-i~-~~~~~----~~---~~~T~~~~p--~~~aaa~a~l~~l~~~~l~~-~~~~~g~~l 336 (443)
T PRK08360 271 L--GKPLGGGLPISATIGRAE-IM-DSLPP----LA---HAFTLSGNP--VASAAALAVIEEIEEKNLLK-RAEKLGNYT 336 (443)
T ss_pred e--cccccCCceeEEEEEcHH-HH-hhhcC----CC---CCCCCCcCH--HHHHHHHHHHHHHHHcCHHH-HHHHHHHHH
Confidence 4 788776677888887532 22 22210 00 011211222 22344456666665554322 777788888
Q ss_pred HHHHHhc
Q 017569 353 SFFVIHS 359 (369)
Q Consensus 353 ~~~L~~~ 359 (369)
++.|+++
T Consensus 337 ~~~L~~l 343 (443)
T PRK08360 337 KKRLEEM 343 (443)
T ss_pred HHHHHHH
Confidence 8888753
No 315
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.97 E-value=1.8e-07 Score=92.59 Aligned_cols=252 Identities=10% Similarity=-0.078 Sum_probs=141.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-..... .....+.+.++.+.|++++.-.. ....++++|+||+..|++.++..
T Consensus 59 h~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGseA~e~AlklAr~~------ 126 (433)
T PRK08117 59 HRHPKVVQAIKEQADKLMHGPS-GVIYYESILKLAEELAEITPGGL-----DCFFFSNSGAEAIEGALKLAKHV------ 126 (433)
T ss_pred CCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHHHHHHHHHHHHHh------
Confidence 4467888888888765322211 11123344556666888763211 24788999999999999988763
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhc-------------ceeEEEeccCCccc------------cCHHHHHHHHh
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFE-------------VELKEVKLEEGYYV------------MNPVKAVELVD 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~------------~d~~~L~~~i~ 200 (369)
.| +++|+. ....|-+...++...+ -++..+|.... ++ -|+++|++.++
T Consensus 127 -tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 200 (433)
T PRK08117 127 -TK----RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYC-DRCPKGEDPEVCFLECLRDLESLFK 200 (433)
T ss_pred -cC----CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcc-ccccccCchhHHHHHHHHHHHHHHH
Confidence 11 345554 4445554433322211 11344444211 11 15667777765
Q ss_pred h-----cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcE
Q 017569 201 E-----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKS 270 (369)
Q Consensus 201 ~-----~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds 270 (369)
. +..+|++.......|.+.| +++|.++|++| ++++++|++|.++.. ....... .+.+ ..|.
T Consensus 201 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~gr--~G~~~~~~~~gv-~pDi 271 (433)
T PRK08117 201 HQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH------GILLIFDEVQTGFGR--TGEWFAAQTFGV-VPDI 271 (433)
T ss_pred hccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhccCc--cccchhHhhcCC-CCCE
Confidence 2 3556776666666677777 99999999999 999999999986422 1100000 1111 2465
Q ss_pred EEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
+ ...|.+++....|+++.+++ .. ..+. .. . ...|..+ +....++..++|+.+..+++.+ +..++.+
T Consensus 272 ~--t~sK~lg~G~pigav~~~~~-i~-~~~~--~~----~-~~~T~~~--np~~~aaa~a~L~~l~~~~l~~-~~~~~g~ 337 (433)
T PRK08117 272 M--TIAKGIASGLPLSAVVASKE-LM-EQWP--LG----S-HGTTFGG--NPVACAAALATLEVIKEEKLLD-NANEMGA 337 (433)
T ss_pred e--ehhhhccCCCcceeEEEcHH-HH-hhcc--CC----C-CCCCCCc--CHHHHHHHHHHHHHHHhccHHH-HHHHHHH
Confidence 4 46788876677888887542 22 1211 00 0 0111111 1222344445666664444322 6777788
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
++++.|+++
T Consensus 338 ~l~~~L~~l 346 (433)
T PRK08117 338 YALERLEVL 346 (433)
T ss_pred HHHHHHHHH
Confidence 888888764
No 316
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.96 E-value=1.3e-07 Score=90.63 Aligned_cols=188 Identities=12% Similarity=-0.021 Sum_probs=126.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.|.+++.+.+..... +...+++|-++.+.+.++++.-+ ..-++++||||++.|++.+|...
T Consensus 69 H~~p~V~~Av~~~l~~G~~----fg~Pte~Ei~~Aell~~~~p~~e------~vrfvnSGTEAtmsAiRlARa~T----- 133 (432)
T COG0001 69 HAHPAVVEAVQEQLERGLS----FGAPTELEVELAELLIERVPSIE------KVRFVNSGTEATMSAIRLARAYT----- 133 (432)
T ss_pred CCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHHhcCccc------EEEEecchhHHHHHHHHHHHHhh-----
Confidence 4468899999998876632 22345677788888999887732 38899999999999999998752
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhc-------------ce------eEEEeccCCccccCHHHHHHHHhhc---C
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFE-------------VE------LKEVKLEEGYYVMNPVKAVELVDEN---T 203 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G-------------~~------v~~v~~~~~~~~~d~~~L~~~i~~~---~ 203 (369)
.+++|+. ....|-.......-.| +. ++.+|.+ |++++++++++. .
T Consensus 134 ------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~g~~I 201 (432)
T COG0001 134 ------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFEEYGDDI 201 (432)
T ss_pred ------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHHHcCCcE
Confidence 2455554 4455554444333222 21 3344433 789999999873 4
Q ss_pred cEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC
Q 017569 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l 279 (369)
.+|++--.-...|.+-| +++|.++|+++ ++.+|.|++..++=.++-. ....--...|..+ ..|.+
T Consensus 202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~------G~lLI~DEViTGFR~~~gG---aq~~~gi~PDltt--lGKiI 270 (432)
T COG0001 202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH------GALLIFDEVITGFRVALGG---AQGYYGVEPDLTT--LGKII 270 (432)
T ss_pred EEEEeccccCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchhhcccCCcc---cccccCcCcchhh--hhhhh
Confidence 66776666666687754 88999999999 9999999997764332111 0111111345555 67999
Q ss_pred CCCCCeEEEEEeC
Q 017569 280 LVYAGVGWVVWRT 292 (369)
Q Consensus 280 ~~p~g~g~l~~~~ 292 (369)
++...+|++-.|.
T Consensus 271 GGGlP~ga~gGr~ 283 (432)
T COG0001 271 GGGLPIGAFGGRA 283 (432)
T ss_pred cCCcceeeeccHH
Confidence 9999999887654
No 317
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.96 E-value=3e-08 Score=92.41 Aligned_cols=168 Identities=19% Similarity=0.149 Sum_probs=103.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe---CCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-ecCCCcchH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGT---VGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCW 167 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t---~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi-~s~~~h~s~ 167 (369)
+-..||+- +++.||++. ..+- .+||.|+..++...+++ +++++ ++..-|-.+
T Consensus 55 GRd~le~i----yA~vfgaE~-------ALVRpq~vSGTHAi~~~Lfg~Lrp-------------GD~ll~~tG~PYDTL 110 (403)
T PF06838_consen 55 GRDKLERI----YADVFGAED-------ALVRPQFVSGTHAIALALFGVLRP-------------GDELLSITGKPYDTL 110 (403)
T ss_dssp HHHHHHHH----HHHHCT-SE-------EEEETTS-SHHHHHHHHHHHH--T-------------T-EEEESSSS--CCH
T ss_pred cHHHHHHH----HHHHhCchh-------hhhcccccchHHHHHHHHHhcCCC-------------CCeEEEcCCCchhhH
Confidence 44455544 999999985 3332 37899999999998774 35544 344344455
Q ss_pred HHHH----------hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC----CCcccCCCHHHHHHHHHHhhh
Q 017569 168 EKFA----------RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS----TLTGEFEDVKLLHDLLTKKNE 233 (369)
Q Consensus 168 ~~~~----------~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~----~~tG~~~~l~~I~~l~~~~~~ 233 (369)
++.+ +-+|+..+.||+.++ +.+|.+.++++++++|++|.+.-.. -++=.+++++++++++|+.+.
T Consensus 111 ~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d-g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p 189 (403)
T PF06838_consen 111 EEVIGIRGNGPGSLKEFGIKYREVPLTED-GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP 189 (403)
T ss_dssp HHHHTSSSSSSSSTGGGT-EEEE--B-TT-SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T
T ss_pred HHHhCCCCCCCCChHHhCceeEEEeecCC-CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 5554 334677899999876 8999999999999999999876432 333345778888888887744
Q ss_pred ccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC--CCeEEEEEeCCCCc
Q 017569 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRTKDDL 296 (369)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p--~g~g~l~~~~~~~~ 296 (369)
++++.||.|||.++- ..-+..+ ++|.+.-|.=|..++. +..|.++- ++++.
T Consensus 190 ----~~iifVDNCYGEFvE----~~EP~~v---GADl~aGSLIKNpGGgiAptGGYIaG-r~~lV 242 (403)
T PF06838_consen 190 ----DVIIFVDNCYGEFVE----TQEPTEV---GADLMAGSLIKNPGGGIAPTGGYIAG-RKDLV 242 (403)
T ss_dssp ----TSEEEEE-TTTTTTS----SS-GGGG---T-SEEEEETTSGGGTTT-SS-EEEEE-SHHHH
T ss_pred ----CeEEEEeCCcceecc----ccCcccc---chhheeccceeCCCCCccCcCCEEec-hHHHH
Confidence 899999999998653 2223333 8999999999995443 33356654 44443
No 318
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.93 E-value=1.2e-07 Score=91.33 Aligned_cols=189 Identities=15% Similarity=0.019 Sum_probs=116.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-......++ .+...++.+.++++.+.+. ..++++|+||+..|++.++..
T Consensus 40 h~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-------v~~~~SGseA~e~Alklar~~------ 104 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLVVAGPMFE--HEEKEEMLEELSKWVNYEY-------VYMGNSGTEAVEAALKFARLY------ 104 (364)
T ss_pred CCCHHHHHHHHHHHHhcCCccCCcC--CHHHHHHHHHHHhhcCCCE-------EEEeCchHHHHHHHHHHHHHH------
Confidence 3457777888877765322111121 2223345555777776553 899999999999999998764
Q ss_pred hcCCCCCCCeEEecCCCcch-HHHHHhhh-------cce-----eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 147 EQGKPYDKPNIVTGANVQVC-WEKFARYF-------EVE-----LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s-~~~~~~~~-------G~~-----v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
.| +++|+....+|.. ..-++... +.. +..+|. .|++++++.+.+++.+|++.....
T Consensus 105 -~g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~i~~~~aAvivEpi~g 173 (364)
T PRK04013 105 -TG----RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF------NDVEAAKEAITKETAAVIFEPIQG 173 (364)
T ss_pred -hC----CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC------CCHHHHHHHhcCCcEEEEEcCCcC
Confidence 11 3567766655433 22222221 111 222221 167889999988888888776665
Q ss_pred CcccC-CC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 214 LTGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 214 ~tG~~-~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
..|.. -| +++|.++|+++ +++++.|+++.++ . ......+...-...|.+++ .|.+++....|.++
T Consensus 174 ~gG~~~~~~~yl~~lr~lc~~~------gillI~DEv~tG~-R--tG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~ 242 (364)
T PRK04013 174 EGGIVPAKEEFVKTLRDLTEDV------GALLIADEVQSGL-R--TGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTL 242 (364)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcC-C--CCchhHHHhcCCCCCEEEe--cccccCCceeEEEE
Confidence 55554 34 99999999999 9999999998764 2 1111111111124677774 67776666777777
Q ss_pred EeC
Q 017569 290 WRT 292 (369)
Q Consensus 290 ~~~ 292 (369)
.+.
T Consensus 243 ~~~ 245 (364)
T PRK04013 243 TNF 245 (364)
T ss_pred ecc
Confidence 654
No 319
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.93 E-value=5.8e-07 Score=87.59 Aligned_cols=253 Identities=10% Similarity=-0.105 Sum_probs=151.0
Q ss_pred CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.+..-. ...... ..+-..++.+.|.+++..+. .....++++|+|||-.|++.+|...
T Consensus 72 H~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~~~----~~~~~f~~sGaeA~E~AiKiAr~~T---- 141 (447)
T COG0160 72 HNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPGSG----LKKVFFGNSGAEAVEAAIKIARAYT---- 141 (447)
T ss_pred CCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCccc----CCeEEecCCcHHHHHHHHHHHHHHh----
Confidence 446888888887655422 111111 11233344555666655431 1348899999999999999998752
Q ss_pred HhcCCCCCCCeEE-ecCCCcchHHHHHhhhc-------------ceeEEEeccCC---cc--------ccCHHHHHHHHh
Q 017569 146 KEQGKPYDKPNIV-TGANVQVCWEKFARYFE-------------VELKEVKLEEG---YY--------VMNPVKAVELVD 200 (369)
Q Consensus 146 ~~~g~~~~~~~Vi-~s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~---~~--------~~d~~~L~~~i~ 200 (369)
| +..|| +....|-....++.+.| -.+..+|.... .+ .-..+.++..+.
T Consensus 142 ---g----r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~ 214 (447)
T COG0160 142 ---G----RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALF 214 (447)
T ss_pred ---C----CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHH
Confidence 1 34444 45555655444444432 12667776421 01 112344555443
Q ss_pred h------cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcE
Q 017569 201 E------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS 270 (369)
Q Consensus 201 ~------~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds 270 (369)
. ++.++++-.-....|.+.| ++++.++|+++ |+++|+|++|.|+-. .-.-+.+...-.-.|.
T Consensus 215 ~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~------gillI~DEVQtG~GR--TG~~fa~E~~gv~PDi 286 (447)
T COG0160 215 DLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH------GILLIADEVQTGFGR--TGKMFAFEHFGVEPDI 286 (447)
T ss_pred hhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cccchhhhhcCCCCCE
Confidence 2 3678888888888888754 89999999999 999999999988654 1111111111114788
Q ss_pred EEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
+| ..|-+++....|.++.|.. ... . ..+.. .+|. +..+. ..++..+.|+.+..+++.+ ++.++-+
T Consensus 287 vt--~aK~ig~G~Pl~avv~r~e-i~~-~-------~~g~~-~~Tf-~GNpv-a~Aaa~AvL~vie~e~L~~-~a~~~G~ 351 (447)
T COG0160 287 VT--LAKSLGGGLPLSAVVGRAE-IMD-W-------PPGGH-GGTF-GGNPV-ACAAALAVLDVIEEENLLE-RAAELGE 351 (447)
T ss_pred EE--ecccccCCCceeEEeccHH-hcc-c-------CCccc-CCCC-CcCHH-HHHHHHHHHHHHHHccHHH-HHHHHHH
Confidence 88 5687777777888887642 221 1 11111 1111 12222 2445557777777776655 8888999
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
||+++|.++
T Consensus 352 ~l~~~L~~l 360 (447)
T COG0160 352 YLRDRLEEL 360 (447)
T ss_pred HHHHHHHHH
Confidence 999999763
No 320
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.92 E-value=3.4e-07 Score=90.41 Aligned_cols=251 Identities=10% Similarity=-0.041 Sum_probs=141.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-...... ...+...++.+.|.+++..+. ....++++|+||+-.|++.+|.....
T Consensus 91 h~hp~v~~Av~~ql~~l~~~~~~--~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~t~~--- 160 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQPLHSQE--LLDPLRALLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 160 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCcccc--cCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHhh---
Confidence 45688888888877643322111 123334456667777764332 23789999999999999998875311
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccCCccccCHHHHHHHHhh------cCcEEE
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE------NTICVA 207 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~ 207 (369)
.| +.+|+.... .|-....+....|- .+..+|.+ |.+.+++.+++ +..+|+
T Consensus 161 -~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~------d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 161 -RG----KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG------DIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred -cC----CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC------CHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 345665554 44433333322221 12333322 56777777642 356666
Q ss_pred EeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccCCCCC
Q 017569 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 208 ~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~~p 282 (369)
+......-|.+.| +++|.++|+++ ++.+++|+++.|+-. ...-..+. +.+ ..|.++ ..|-+++.
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~gv-~PDivt--~gK~lg~G 298 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEF------GALLILDEVQTGMGR--TGKMFACEHEGV-QPDILC--LAKALGGG 298 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeecccCCCc--cccchhhhhcCC-CCCeee--ehhhhcCC
Confidence 6666666677766 99999999999 999999999865322 00000011 112 367776 57887665
Q ss_pred -CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 283 -AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 283 -~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
...|.++.++ +.. ..+.. ..+.-. . |..|.. ...++..++|+.+..+++.+ +..++.++|++.|+++
T Consensus 299 ~~Pigavv~~~-~i~-~~~~~-~~~~~~--~--T~~gnp--~~~Aaa~a~L~~i~~~~l~~-~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 299 VMPIGATIATE-AVF-SVLFD-NPFLHT--T--TFGGNP--LACAAALATINELLEKNLPA-QAAIKGDFLLDGFQQL 366 (442)
T ss_pred cccceEEEecH-HHH-Hhhhc-cCcccc--C--CCCCCH--HHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHH
Confidence 3567777753 222 22211 111100 1 111211 22344446677776665443 6777788888888764
No 321
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.92 E-value=1.4e-09 Score=102.08 Aligned_cols=162 Identities=17% Similarity=0.199 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc------chHHHHHh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ------VCWEKFAR 172 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h------~s~~~~~~ 172 (369)
.+.+.+++++|++. ..+++.-..|+++++.++.. +.+||+|.-.- +-+...++
T Consensus 51 ~v~~ll~~ltgAea-------A~VvNnnaAAv~L~l~~la~--------------~~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA-------ALVVNNNAAAVLLALNTLAK--------------GKEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc-------cccccccccccccccccccc--------------ccccccccccccccccccccccccc
Confidence 34556889999985 67888877777777666533 13566654322 23556677
Q ss_pred hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc-----ccCCCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-----GEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-----G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
.-|+.+++|-.. .+..+++++++|+++|.++.-.+++|.. +. -++++++++++++ ++++++|.+.
T Consensus 110 ~sGa~lvEVGtt---N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~------~lp~i~Dlgs 179 (367)
T PF03841_consen 110 QSGARLVEVGTT---NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAELAKEH------GLPVIVDLGS 179 (367)
T ss_dssp -------------------------------------------------------HHHHHHHHH------T--EEEE-TT
T ss_pred cccccccccccc---ccccccccccccccccccccccccccccccccccc-ccHHHHHHHHhhc------CCcEEEECCC
Confidence 778888777764 2557889999999999998888877773 33 3799999999999 9999999987
Q ss_pred ccccc--cc-cCCCccc-cccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 248 GGFIA--PF-LYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 248 ~~~~~--~~-~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
|...- ++ +.+++.. ..-..|+|.+++|+.|.+++|. +|+++.|+
T Consensus 180 G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 180 GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 65331 11 1122211 1114589999999999999888 68888764
No 322
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.92 E-value=3.3e-07 Score=90.90 Aligned_cols=254 Identities=11% Similarity=-0.084 Sum_probs=136.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-.+ +.......+...++.+.+.+++.... .....++++|+||+..|++.++...
T Consensus 72 h~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~sGseA~e~AlklAr~~t----- 141 (443)
T PRK06058 72 NSAPRVVEAVREQVARFTH-TCFMVTPYEGYVAVAEQLNRLTPGDH----EKRSALFNSGAEAVENAVKIARSYT----- 141 (443)
T ss_pred CCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCCC----CCEEEEeCCcHHHHHHHHHHHHHhh-----
Confidence 4468888888888765321 11111223445567777888765321 0247889999999999999987641
Q ss_pred hcCCCCCCCeEEecCCCcc-hHHHHHhhhc--------c-----eeEEEeccCCccc------c--------CHHHHHHH
Q 017569 147 EQGKPYDKPNIVTGANVQV-CWEKFARYFE--------V-----ELKEVKLEEGYYV------M--------NPVKAVEL 198 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~-s~~~~~~~~G--------~-----~v~~v~~~~~~~~------~--------d~~~L~~~ 198 (369)
| +++|+....+|. ....++.+.+ . .+..+|.... ++ . ..+.+++.
T Consensus 142 --g----r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (443)
T PRK06058 142 --G----RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP-YRDPKGLATDGEEAAARAITVIEKQ 214 (443)
T ss_pred --C----CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc-cccccccccchHHHHHHHHHHHHHh
Confidence 1 356666554443 3333332211 1 1233332110 11 1 12334444
Q ss_pred Hh-hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 199 VD-ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 199 i~-~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
+. +++.+|++.-.....|.+-| +++|.++|+++ |+++++|+++.|+... .....+...-...|.+++
T Consensus 215 ~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfgRt--G~~fa~~~~gv~PDiv~~ 286 (443)
T PRK06058 215 VGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN------GVVFIADEVQTGFART--GAWFACEHEGIVPDLITT 286 (443)
T ss_pred hCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC--hhhhHHHhcCCCCCEEEE
Confidence 43 34555554443333344433 99999999999 9999999998865321 100001111113588886
Q ss_pred cCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHH
Q 017569 274 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSS 353 (369)
Q Consensus 274 ~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~ 353 (369)
.|.+++.+..|+++.+++ .. +.+.. . .. ..|..+. ....++..++|+.+..+++.+ +..++.++|+
T Consensus 287 --gK~l~~G~Pi~av~~~~~-i~-~~~~~--~--~~---~~T~~gn--pl~~aaa~a~L~~~~~~~l~~-~~~~~g~~l~ 352 (443)
T PRK06058 287 --AKGIAGGLPLSAVTGRAE-IM-DAPHP--G--GL---GGTYGGN--PVACAAALAAIETIEEDDLVA-RARQIEALMT 352 (443)
T ss_pred --cccccCCCccEEEEEcHH-HH-hhccC--C--CC---CCCCCCC--HHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHH
Confidence 488777788888887642 22 22110 0 00 1111111 112333445555555444333 6777788888
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
++|+++
T Consensus 353 ~~L~~l 358 (443)
T PRK06058 353 DRLRAL 358 (443)
T ss_pred HHHHHH
Confidence 888763
No 323
>PRK06541 hypothetical protein; Provisional
Probab=98.91 E-value=4e-07 Score=90.60 Aligned_cols=262 Identities=12% Similarity=-0.018 Sum_probs=142.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+... .....+...++.+.+.+++..+. ....++++|+||+..|++.++..+..
T Consensus 68 h~~p~v~~Av~~q~~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~--- 138 (460)
T PRK06541 68 HGRAELAEAAAKQAGTLAFFPL-WSYAHPPAIELAERLAALAPGDL-----NRVFFTTGGSEAVESAWKLAKQYFKL--- 138 (460)
T ss_pred CCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEcCCcHHHHHHHHHHHHHHHHh---
Confidence 4457888888888765322111 11122333456666777754322 24899999999999999998875321
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHhhhcc------------eeEEEeccCC-c---cccC--------HHHHHHHHhh
Q 017569 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEV------------ELKEVKLEEG-Y---YVMN--------PVKAVELVDE 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~---~~~d--------~~~L~~~i~~ 201 (369)
.|.+ .+.+|+.- ...|-....++...|. ++..+|.... . +.-+ ++.+++.+..
T Consensus 139 -~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (460)
T PRK06541 139 -TGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEF 216 (460)
T ss_pred -cCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 13455543 3344433333322221 1333443210 0 1011 3677887752
Q ss_pred ---c-CcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEE
Q 017569 202 ---N-TICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSIN 272 (369)
Q Consensus 202 ---~-~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~ 272 (369)
+ ..+|++.-...+.|.+.+ +++|.++|+++ |+++++|+++.++-. ......+. +.+ ..|.++
T Consensus 217 ~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tGfGR--~G~~~a~~~~gv-~PDivt 287 (460)
T PRK06541 217 EGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY------DVLLVSDEVICAFGR--LGEMFGCERFGY-VPDIIT 287 (460)
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CchhhhhhhcCC-CCCEEE
Confidence 3 344554444777788877 99999999999 999999999954321 11100011 112 367776
Q ss_pred EcCccCCCCCC-CeEEEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 273 ~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
..|.+.+.+ ..|.++.+++ .. ..+.... .+.. ..|..+. ....++..++|+.+..+++.+ +..++.+
T Consensus 288 --~gK~l~~G~~pigav~~~~~-i~-~~~~~~~~~~~~----~~T~~gn--p~~~aaala~l~~l~~~~~~~-~~~~~g~ 356 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASDR-LF-EPFLDGPTMFLH----GYTFGGH--PVSAAVALANLDIFEREGLLD-HVRDNEP 356 (460)
T ss_pred --ecccccCCccceeEEEEcHH-HH-HHhhcCCCcccc----CCCCCCC--HHHHHHHHHHHHHHHhccHHH-HHHHHHH
Confidence 578877665 6788887643 21 1211111 0100 0111111 122344445566665555433 7888889
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
+|++.|+++
T Consensus 357 ~l~~~L~~l 365 (460)
T PRK06541 357 AFRATLEKL 365 (460)
T ss_pred HHHHHHHHh
Confidence 999999876
No 324
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.90 E-value=3.4e-07 Score=90.98 Aligned_cols=249 Identities=12% Similarity=-0.040 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-...... ...+...++.+.|.+++..+. ....++++|+||+-.|++.+|....
T Consensus 98 H~~p~v~~Ai~~ql~~l~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t~---- 166 (459)
T PRK11522 98 HRNPVVVSAVQNQLAKQPLHSQE--LLDPLRAMLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQS---- 166 (459)
T ss_pred CCCHHHHHHHHHHHhhCcccccc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCchHHHHHHHHHHHHHhc----
Confidence 44588888888877653222111 123344456666777754322 2478999999999999999887521
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhh------cCcEEE
Q 017569 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDE------NTICVA 207 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~ 207 (369)
.. .+.+|+....+ |-....++...|-. +..+|. -|.+++++.++. +..+|+
T Consensus 167 ---~~-gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~~~~iAavI 236 (459)
T PRK11522 167 ---PR-GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF------GNIEAMRTALSECKKTGDDVAAVI 236 (459)
T ss_pred ---cC-CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC------CCHHHHHHHHHHhhccCCcEEEEE
Confidence 01 13456655544 43332233222211 112221 167888888752 345677
Q ss_pred EeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c--ccCCCccccccCCCCcEEEEcCccCCC
Q 017569 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P--FLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 208 ~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~--~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+.......|.+.| ++++.++|+++ |+.+++|+++.|+-. . |... .+. + ..|.++ ..|.++
T Consensus 237 vEpv~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tG~GRtG~~~a~e--~~g--v-~PDivt--~gK~lg 303 (459)
T PRK11522 237 LEPIQGEGGVILPPEGYLTAVRKLCDEF------GALLILDEVQTGMGRTGKMFACE--HEN--V-QPDILC--LAKALG 303 (459)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEeccceecCCccchhhhhh--ccC--C-CCCEEE--echhhh
Confidence 7766666677766 99999999999 999999999865321 0 1111 011 2 357766 478876
Q ss_pred CC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 281 VY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 281 ~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+. ...|.++.+++ .. ..+... .+.- ..|..|. ....++..++|+.+..+++.+ +..++.++|++.|+++
T Consensus 304 gG~~Pigav~~~~~-i~-~~~~~~-~~~~----~~T~~gn--p~~~Aaala~L~~i~~~~l~~-~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 304 GGVMPIGATIATEE-VF-SVLFDN-PFLH----TTTFGGN--PLACAAALATINVLLEQNLPA-QAEQKGDYLLDGFRQL 373 (459)
T ss_pred CCCccceeEEEcHH-HH-HHhccC-Cccc----CCCCCCC--HHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHH
Confidence 65 35677777642 22 121111 1110 1111121 122455557777776655433 8888899999999875
No 325
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.90 E-value=7.2e-07 Score=87.65 Aligned_cols=255 Identities=10% Similarity=-0.036 Sum_probs=138.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.+++...... .....+...++.+.+.+++..+... .....+ +++|+||+..|++.+|..
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGseA~e~AlklAr~~----- 122 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHS-LDMATEAKREFLETFNEIILKPRGL--DYKVQFPGPTGTNAVESALKLARKV----- 122 (412)
T ss_pred CCCHHHHHHHHHHHhhccceec-cccCcHHHHHHHHHHHHhccCccCC--CceEEEeCCCchHHHHHHHHHHhhh-----
Confidence 4568888888888764221111 1122344455666677764322100 012445 489999999999999864
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCC-cc-ccCHHHHHHHHhh------cCc
Q 017569 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG-YY-VMNPVKAVELVDE------NTI 204 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~-~~-~~d~~~L~~~i~~------~~~ 204 (369)
.| +++|+.-.. .|-...-++...| ..+..+|.... .. .-+++.+++.+++ ++.
T Consensus 123 --tg----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a 196 (412)
T TIGR02407 123 --TG----RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPA 196 (412)
T ss_pred --cC----CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceE
Confidence 12 356665443 4433333332222 12344443210 00 1246778888863 346
Q ss_pred EEEEeeCCCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|++.-.....|.+ +-+++|.++|+++ +++++.|+++.|+-. ......++..-...|.++++ |+++
T Consensus 197 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~~~~~v~PDi~~~~--K~lg 266 (412)
T TIGR02407 197 AVILETVQGEGGINVASDEWLQRLEKLCRRH------DILLIVDDIQAGCGR--TGTFFSFEPAGIEPDIVCLS--KSIS 266 (412)
T ss_pred EEEeccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhHHhcccCCCCCEEEec--hhcc
Confidence 67766666666764 3499999999999 999999999875422 00000111111146777754 9987
Q ss_pred C-CCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH-hcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 281 V-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 281 ~-p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~-lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+ ....|++++++. . ..+. ....+ .++ .+. ....+...+++.. +..+.+.+ +..++.++++++|++
T Consensus 267 ~~G~pigav~~~~~-~--~~~~--~~~~~---~T~--~gn--pl~~aaa~a~l~~~i~~~~l~~-~~~~~g~~l~~~l~~ 333 (412)
T TIGR02407 267 GYGLPLALTLIKPE-L--DVWK--PGEHN---GTF--RGN--NLAFVTATAALEYYWSDDAFEK-AVQRKSEIIQERLDR 333 (412)
T ss_pred CCccceeEEEEchh-h--hccC--CCccC---CCC--Ccc--HHHHHHHHHHHHHHhcccHHHH-HHHHHHHHHHHHHHH
Confidence 6 677899998653 2 2211 10000 111 111 1122334566664 55444443 566677777777764
No 326
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=5.2e-08 Score=91.16 Aligned_cols=292 Identities=11% Similarity=-0.000 Sum_probs=165.9
Q ss_pred HHhhhhcCCCC-ccccccccC------CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCC--CC
Q 017569 47 NDELMLDGNPR-LNLASFVTT------WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVAD--DK 116 (369)
Q Consensus 47 ~~~~~~~~~p~-~~l~~~~~~------~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~--~~ 116 (369)
.+.+..+..|. .||+.++.. +.-+.|.++=...+++. ...|-.-.|...+.+++.+ =+||.+... ..
T Consensus 17 ~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~---llFG~d~~~l~~~ 93 (396)
T COG1448 17 KEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK---LLFGADSPALAED 93 (396)
T ss_pred HHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH---HhcCCCcHHHHhh
Confidence 34455555555 677654432 11134444433333322 2223333466666666322 246755211 12
Q ss_pred CCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHH
Q 017569 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKA 195 (369)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L 195 (369)
....+=|.|||.|+..+...+.... .+..|.+|+|+|.-........|++++..|. |..+..+|.+.+
T Consensus 94 Rv~t~Qt~GGTGAL~~~A~fl~~~~-----------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~m 162 (396)
T COG1448 94 RVATVQTLGGTGALRVAADFLARFF-----------PDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGM 162 (396)
T ss_pred hHhheecCCcchHHHHHHHHHHHhC-----------CCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHH
Confidence 2346778899999988777665431 1347999999999999999999999999997 555567999999
Q ss_pred HHHHhh---cCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCC
Q 017569 196 VELVDE---NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLV 268 (369)
Q Consensus 196 ~~~i~~---~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~ 268 (369)
.+.+.. +..++.-...+||||.- +.+++|.++.++. +..-++|-||-|+....-.+-... .+...+.
T Consensus 163 la~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r------~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 163 LADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER------GLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred HHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 888875 33444445578999975 5699999999999 999999999987654311111111 0111122
Q ss_pred -cEEEEcCccCCCC-CCCeEEEE--EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-
Q 017569 269 -KSINVSGHKYGLV-YAGVGWVV--WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF- 343 (369)
Q Consensus 269 -Dsi~~~~hK~l~~-p~g~g~l~--~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~- 343 (369)
-.++.|+.|-++. .-..|.+. ..+.+.....+.+-..-..+..+++.-.|.+-...++. .-.|+..-.+.+..+
T Consensus 237 ~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~-~p~Lra~W~~El~~Mr 315 (396)
T COG1448 237 ELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILN-NPELRAEWEQELEEMR 315 (396)
T ss_pred cEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhC-CHHHHHHHHHHHHHHH
Confidence 4566677787532 22334433 33332222111110000111111111001110110111 145566666667777
Q ss_pred -HhhHHHHHHHHHHHhc
Q 017569 344 -CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 344 -~~~~~a~~l~~~L~~~ 359 (369)
|..+|.+.|.+.|++.
T Consensus 316 ~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 316 QRILEMRQALVDALKAL 332 (396)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 9999999999999883
No 327
>PRK07482 hypothetical protein; Provisional
Probab=98.89 E-value=5e-07 Score=89.97 Aligned_cols=267 Identities=12% Similarity=-0.094 Sum_probs=142.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+.........+.+.++.+.|.+++..+. ....++++|+||+..|++.++..+..
T Consensus 66 h~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGSEAve~AlKlAr~~~~~--- 137 (461)
T PRK07482 66 YGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM-----SKVYYGLSGSDANETQIKLVWYYNNV--- 137 (461)
T ss_pred CCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh---
Confidence 4468888888888876432111111234445566777887764322 24789999999999999999864321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCC-cc-----------ccCHHHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG-YY-----------VMNPVKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~-~~-----------~~d~~~L~~~i~- 200 (369)
.|.. .+.+|+.-.. .|-...-+....| -.+..++.... +. .-++++|++.+.
T Consensus 138 -~g~~-~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 215 (461)
T PRK07482 138 -LGRP-EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILA 215 (461)
T ss_pred -cCCC-CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 1356665443 3432221221111 11233332210 00 114677888884
Q ss_pred ---hcCcEEEEeeCCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 201 ---ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
++..+|++.-.....|.+- -+++|.++|+++ |+++|+|+++.|+-. ......+...-...|.++
T Consensus 216 ~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR--tG~~~a~~~~gv~PDiv~- 286 (461)
T PRK07482 216 EGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY------DILLIADEVVTGFGR--LGSMFGSDHYGIEPDLIT- 286 (461)
T ss_pred cCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--CcchhhHHhcCCCCCEEE-
Confidence 2356666665554546552 289999999999 999999999877532 111001111111478888
Q ss_pred cCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHH
Q 017569 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLS 352 (369)
Q Consensus 274 ~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l 352 (369)
..|.+.+.+ +.|.++.+++ .. +.+.......+...-..|..| +....++..++|+.+..+++.+ +..++.++|
T Consensus 287 -~gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~~g--npl~~Aaa~a~L~~~~~~~l~~-~~~~~g~~l 360 (461)
T PRK07482 287 -VAKGLTSAYAPLSGSIVGEK-VW-DVLEQGSDEHGAIGHGWTYSG--HPICAAAALANLDILERENLVG-NAAEVGAYF 360 (461)
T ss_pred -EccccccCccccceeeecHH-HH-HHHhcccccCCccccCCCCCc--CHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHH
Confidence 478887664 5677777643 21 122111100010000111111 1222344456666676665443 667777888
Q ss_pred HHHHHh
Q 017569 353 SFFVIH 358 (369)
Q Consensus 353 ~~~L~~ 358 (369)
.+.|++
T Consensus 361 ~~~L~~ 366 (461)
T PRK07482 361 RARLRA 366 (461)
T ss_pred HHHHHH
Confidence 888764
No 328
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.89 E-value=3.5e-07 Score=90.32 Aligned_cols=250 Identities=12% Similarity=-0.032 Sum_probs=141.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...... . ..+.+.++.+.+.+++.. . ....++++|+||+..|++.+|...
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~--~--~~~~~~~la~~l~~~~p~-~-----~~v~f~~sGseA~e~AlklAr~~t----- 133 (428)
T PRK12389 69 HAHPHITKAITEAAENGVLYG--T--PTELEIEFAKMLKEAIPS-L-----EKVRFVNSGTEAVMTTIRVARAYT----- 133 (428)
T ss_pred CCCHHHHHHHHHHHHhCCccC--C--CCHHHHHHHHHHHHhCCC-C-----cEEEEeCCHHHHHHHHHHHHHHhh-----
Confidence 445778888888776533211 1 223344566667776541 1 248999999999999999988741
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHhhhcceeE--------EEe--ccCCcc---ccCHHHHHHHHhh---cCcEEEEe
Q 017569 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEVELK--------EVK--LEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G~~v~--------~v~--~~~~~~---~~d~~~L~~~i~~---~~~~v~~~ 209 (369)
| +.+|+.- ...|-....++...|.... .++ ..++.. .-|++.+++.+++ +..+|++.
T Consensus 134 --g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 134 --G----RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred --C----CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 2 3455544 3444433333332221100 000 000000 1168899988863 45567766
Q ss_pred eCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe
Q 017569 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (369)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~ 285 (369)
-.....|.+.| +++|.++|+++ ++++++|+++.++=..+..- ...+.+ ..|.++ ..|.+++....
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~Rt~~~~a--~~~~gv-~PDivt--~gK~lggG~Pi 276 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEA------GALVIYDEVITAFRFMYGGA--QDLLGV-EPDLTA--LGKIIGGGLPI 276 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCcchh--hHHhCC-CCCeee--echhhcCCCce
Confidence 66666687777 99999999999 99999999988751111100 001112 467666 47887766777
Q ss_pred EEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 286 GWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
|.++.++ +.. +.+.. ...+.++ |..+. ....++..++|+.+..+++.+ +..++.++|++.|++
T Consensus 277 ~av~~~~-~i~-~~~~~~~~~~~~~-----T~~gn--pl~~Aaala~L~~l~~~~l~~-~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 277 GAYGGRK-DIM-EQVAPLGPAYQAG-----TMAGN--PASMAAGIACLEVLQQEGVYE-KLDRLGAMLEEGILE 340 (428)
T ss_pred eEEeEHH-HHH-hhhccCCCccccc-----CCccC--HHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHH
Confidence 8887653 222 22211 0001111 11111 122344456677776555332 788889999998876
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.88 E-value=9.3e-07 Score=87.55 Aligned_cols=251 Identities=12% Similarity=-0.095 Sum_probs=138.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
+.+|.+.+++.+.++...... ......+.+.++.+.|.+++..+. .....++++|+||+..|++.++..
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~~~----~~~v~f~~SGsEA~e~AlklAr~~------ 138 (441)
T PRK05769 70 HAHPKVVKAVKEQAEKFLHYS-LTDFYYEPAVELAERLVEIAPGGF----EKKVFFTNSGTESNEAAIKIARYH------ 138 (441)
T ss_pred CCCHHHHHHHHHHHHhccCcc-CcccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHH------
Confidence 445778888888776432211 111123445566777887764211 124899999999999999998864
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc-------------eeEEEeccCCccc-------------cCHHHHHHHH
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYV-------------MNPVKAVELV 199 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~-------------~d~~~L~~~i 199 (369)
.| +.+|+.-.. .|-...-++...|. ++..+|... .++ -+++.+++.+
T Consensus 139 -tg----r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~~ 212 (441)
T PRK05769 139 -TG----RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPN-PYRNPWGIENPEECGNAVLDFIEDYL 212 (441)
T ss_pred -hC----CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCc-cccccccCCchHHHHHHHHHHHHHHH
Confidence 12 356665443 34333323322211 133444321 011 1234466623
Q ss_pred -h-----hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCC
Q 017569 200 -D-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLV 268 (369)
Q Consensus 200 -~-----~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~ 268 (369)
+ ++..+|++.......|.+.| +++|.++|+++ ++++++|+++.++... ..-..+ .+.+ ..
T Consensus 213 ~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~tG~gr~--G~~~a~~~~gv-~p 283 (441)
T PRK05769 213 FKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY------GILLIDDEVQTGMGRT--GKMFAIEHFGV-EP 283 (441)
T ss_pred HhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--cceehhhccCC-CC
Confidence 2 23556666655566677777 99999999999 9999999998863221 000000 1111 34
Q ss_pred cEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHH
Q 017569 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDH 348 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~ 348 (369)
|.+++ .|.++++++.|+++.++. .. ... .... ..|..+ . ....++..++|+.+.. ++.+ +..++
T Consensus 284 Divt~--~K~l~~G~p~gav~~~~~-i~-~~~---~~~~-----~~T~~g-~-p~~~aaa~a~L~~l~~-~~~~-~~~~~ 347 (441)
T PRK05769 284 DIITL--AKAIAGGLPLGAVIGRAE-LM-FLP---PGSH-----ANTFGG-N-PVAAAAALATLEELEE-GLLE-NAQKL 347 (441)
T ss_pred CEEEE--cccccCCcccEEEEEehh-hh-hcC---CCCC-----CCCCCc-C-HHHHHHHHHHHHHHHH-HHHH-HHHHH
Confidence 77775 477666677788877643 22 111 0011 112112 1 1223444466666644 3222 78888
Q ss_pred HHHHHHHHHhc
Q 017569 349 KKLSSFFVIHS 359 (369)
Q Consensus 349 a~~l~~~L~~~ 359 (369)
.++|++.|+++
T Consensus 348 g~~l~~~L~~l 358 (441)
T PRK05769 348 GEYLRKELKEL 358 (441)
T ss_pred HHHHHHHHHHH
Confidence 89999988764
No 330
>PLN00144 acetylornithine transaminase
Probab=98.87 E-value=4.8e-07 Score=87.99 Aligned_cols=254 Identities=11% Similarity=-0.091 Sum_probs=136.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-...... ...+.+.++.+.+.++.+.+ ...++++|+||+..|++.++.....+..
T Consensus 31 h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~~~ 101 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASSFAD-------RVFFCNSGTEANEAAIKFARKYQRVRAP 101 (382)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcCCCC-------eEEEeCCcHHHHHHHHHHHHHHHhccCC
Confidence 44578888888877653221111 11233345666677665433 3899999999999999998764221000
Q ss_pred hcC--CCCCCCeEEecC-CCcchHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhh-cCcEEEEee
Q 017569 147 EQG--KPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDE-NTICVAAIL 210 (369)
Q Consensus 147 ~~g--~~~~~~~Vi~s~-~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~ 210 (369)
..+ ....+.+|+.-. ..|-...-+....+-. +..+|. -|+++|++.+.. ++.+|++.-
T Consensus 102 ~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~~~~~~~aavi~eP 175 (382)
T PLN00144 102 DKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY------GNLEAARKLIQKGKTAAVFVEP 175 (382)
T ss_pred CCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC------CCHHHHHHhcCCCCeEEEEEcc
Confidence 000 000024555544 4444333333322211 122221 168999988864 456666665
Q ss_pred CCCCcccC--CC--HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 211 GSTLTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 211 ~~~~tG~~--~~--l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
..++.|.. ++ +++|.++|+++ ++++++|+++.++.. ...-...+..-...|.++ ..|.+.+....|
T Consensus 176 ~q~~gg~~~~~~~~~~~l~~l~~~~------g~llI~DEv~tg~gr--~g~~~~~~~~~~~PDi~t--~sK~l~~G~pig 245 (382)
T PLN00144 176 VQGEGGIYPATKEFLQGLRALCDEA------GALLVFDEVQCGLGR--TGYLWAHEAYGVEPDIMT--LAKPLAGGLPIG 245 (382)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchHhhhhhcCCCCCEEE--ecccccCCcceE
Confidence 56664443 34 89999999999 999999999887532 111011111111346444 579887778889
Q ss_pred EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHH
Q 017569 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVI 357 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~ 357 (369)
+++.+++ .. +.+.. .. ...+. +-+.....++.++|+.+..+++.+ +..++.+++++.|+
T Consensus 246 ~v~~~~~-~~-~~~~~--~~-----~~~T~--~~~pl~~aaa~a~l~~i~~~~~~~-~~~~~g~~l~~~l~ 304 (382)
T PLN00144 246 AVLVTEK-VA-SAINP--GD-----HGSTF--AGGPLVCNAALAVLDKISKPGFLA-SVAKKGEYLRELLR 304 (382)
T ss_pred EEEEcHH-HH-hccCC--CC-----CCCCC--CCCHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHH
Confidence 9988532 22 22110 00 01111 111222344555667776555544 44444555555444
No 331
>PRK06105 aminotransferase; Provisional
Probab=98.87 E-value=6e-07 Score=89.35 Aligned_cols=265 Identities=11% Similarity=-0.027 Sum_probs=142.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++..+....+....+.+.++.+.|.+++..+. ....++++|+||+-.|++.++.....
T Consensus 64 h~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseAve~AlKlar~~~~~--- 135 (460)
T PRK06105 64 FSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-----SKVFFTNSGSEANDTVVKLVWYYNNA--- 135 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 4568888888888865332111111223444456677888764332 24789999999999999998754211
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhcc------------eeEEEeccCCccc-------------cCHHHHHHHHh
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV-------------MNPVKAVELVD 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~-------------~d~~~L~~~i~ 200 (369)
.|.. .+.+|+. ....|-....+....|. .+..+|... .++ -..+++++.+.
T Consensus 136 -~g~t-~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~le~~~~ 212 (460)
T PRK06105 136 -LGRP-EKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH-YYRFGLPGESEEAFATRLANELEALIL 212 (460)
T ss_pred -cCCC-CCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc-ccccccCCCChHHHHHHHHHHHHHHHH
Confidence 1211 1345555 44445443333222221 122233211 011 12466777774
Q ss_pred ----hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCCcE
Q 017569 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKS 270 (369)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Ds 270 (369)
++..+|++---....|.+.+ ++++.++|+++ ++++++|+++.|+-. . ++.-+ ..+ + ..|.
T Consensus 213 ~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~------~~llI~DEv~tG~GRtG~~f~~~-~~~--v-~PDi 282 (460)
T PRK06105 213 AEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY------DILLVADEVICGFGRTGNMFGCE-TFG--I-KPDI 282 (460)
T ss_pred HcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCeEEEeccccCCCcCchhhhHH-hcC--C-CCCe
Confidence 23456666655555576655 99999999999 999999999855322 1 11111 111 2 3677
Q ss_pred EEEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHH
Q 017569 271 INVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHK 349 (369)
Q Consensus 271 i~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a 349 (369)
++ ..|.+.+. ...|.++.+++ .. ..+.......+...-..|..+.. ....+..++|..+..+++.+ +..++.
T Consensus 283 ~~--~gK~lggG~~P~~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~~gnp--l~~aaa~a~L~~i~~~~l~~-~v~~~g 355 (460)
T PRK06105 283 LV--MSKQLSSSYQPLSAVLMNEK-VY-DPIADESGKIGTFGHGFTASGHP--VAAAVALENLAIIEERDLVG-NAAERG 355 (460)
T ss_pred ee--eecccccCcccceEEEEcHH-HH-HHHhcccccCcccccCCCCCCCH--HHHHHHHHHHHHHHhccHHH-HHHHHH
Confidence 76 56887665 25677777542 21 22211110001000011111111 12344445677776554433 888899
Q ss_pred HHHHHHHHhc
Q 017569 350 KLSSFFVIHS 359 (369)
Q Consensus 350 ~~l~~~L~~~ 359 (369)
++|++.|+++
T Consensus 356 ~~l~~~L~~l 365 (460)
T PRK06105 356 ARLQARLRAL 365 (460)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 332
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.87 E-value=6.5e-07 Score=88.19 Aligned_cols=254 Identities=12% Similarity=-0.069 Sum_probs=141.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++..... .......+.+.++.+.+.++..... .....++++|+||+..|++.++..
T Consensus 56 h~~p~v~~ai~~ql~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~----~~~~~f~~sGseA~e~AlklAr~~------ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFTHT-AYQIVPYESYVTLAEKINALAPVSG----QAKTAFFTTGAEAVENAVKIARAH------ 124 (421)
T ss_pred CCCHHHHHHHHHHHHhccCc-ccCccCCHHHHHHHHHHHHhCCCCC----CceEEEeCChHHHHHHHHHHHHHh------
Confidence 44677888888887653221 1111223334456666777664221 124789999999999999998763
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc-------------eeEEEeccCCcccc----CHHHHHHHHh-----hcC
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYVM----NPVKAVELVD-----ENT 203 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~----d~~~L~~~i~-----~~~ 203 (369)
.| +++|+.-.. .|-....++...|. .+..+|...+...+ +++.+++.+. ++.
T Consensus 125 -tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK09792 125 -TG----RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQV 199 (421)
T ss_pred -cC----CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCce
Confidence 12 356665443 44332222222121 13444442211112 3477888876 245
Q ss_pred cEEEEeeCCCCcccCC-C---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC
Q 017569 204 ICVAAILGSTLTGEFE-D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~-~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l 279 (369)
.+|++.-..+++|... | +++|.++|+++ ++++++|+++.++.. ......+..--...|.++ ..|.+
T Consensus 200 aavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~~~pDi~t--~gK~l 269 (421)
T PRK09792 200 AAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH------GIVMIADEVQSGFAR--TGKLFAMDHYADKPDLMT--MAKSL 269 (421)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CCchhHHHhcCCCCcEEE--eehhh
Confidence 6788777788888653 5 99999999999 999999999887532 111011110012456544 57888
Q ss_pred CCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 280 ~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
.+.+..|+++.+++ .. +.+. .... ..|..+.. ...++..++++.+..+.+.+ +..++.+++.+.|++
T Consensus 270 ~~G~pigav~~~~~-i~-~~~~--~~~~-----~~T~~gnp--l~~aaa~a~l~~l~~~~~~~-~~~~~g~~l~~~l~~ 336 (421)
T PRK09792 270 AGGMPLSGVVGNAN-IM-DAPA--PGGL-----GGTYAGNP--LAVAAAHAVLNIIDKESLCE-RANQLGQRLKNTLID 336 (421)
T ss_pred cCCCceEEEEEcHH-HH-hccC--CCCc-----CCCCCCCH--HHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHH
Confidence 77788899887542 21 1111 0000 11111111 11233336666665443322 566778888887765
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.86 E-value=3.9e-07 Score=90.73 Aligned_cols=244 Identities=13% Similarity=-0.038 Sum_probs=139.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++..... . ...+.+.++.+.+.+.+.. . ....++++|+||+..|++.+|..
T Consensus 115 h~~p~v~~av~~ql~~~~~~--~--~~~~~~~~lAe~l~~~~p~-~-----~~v~f~~SGsEA~e~AlklAR~~------ 178 (474)
T PLN02482 115 HADDEVLAALAETMKKGTSF--G--APCLLENVLAEMVIDAVPS-V-----EMVRFVNSGTEACMGVLRLARAY------ 178 (474)
T ss_pred CCCHHHHHHHHHHHhhCCCC--C--CCCHHHHHHHHHHHHhCCC-C-----CEEEEeCChHHHHHHHHHHHHHh------
Confidence 34588888888888654321 1 1234555677778877642 1 24899999999999999999874
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhh-------------hcce------eEEEeccCCccccCHHHHHHHHhh---cC
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARY-------------FEVE------LKEVKLEEGYYVMNPVKAVELVDE---NT 203 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~-------------~G~~------v~~v~~~~~~~~~d~~~L~~~i~~---~~ 203 (369)
.| +++|+.-. ..|-........ -|.. +..+|. -|+++|++.+.+ +.
T Consensus 179 -tg----r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~~~~~i 247 (474)
T PLN02482 179 -TG----REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------NDLEAVKKLFEANKGEI 247 (474)
T ss_pred -cC----CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------CChHHHHHHHHhCCCce
Confidence 12 45666543 334322111100 0110 111111 178899988864 34
Q ss_pred cEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccC
Q 017569 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~ 278 (369)
.+|++.-.....|.+.| +++|.++|+++ ++++++|+++.|+-.. ..... .+.+ ..|.++ ..|.
T Consensus 248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~------g~lLI~DEV~tGfR~g---~~ga~~~~gv-~PDi~t--~gK~ 315 (474)
T PLN02482 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKEN------GALLVFDEVMTGFRIA---YGGAQEYFGI-TPDLTT--LGKV 315 (474)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCeecC---cchHhHHhCC-CCCEEE--ecch
Confidence 56666665566676644 67899999999 9999999998764211 10001 1122 367766 4788
Q ss_pred CCCCCCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHH
Q 017569 279 GLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVI 357 (369)
Q Consensus 279 l~~p~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~ 357 (369)
+++....|.++.++ +.. +.+... ..+.+ .|..+.. ...++..++|+.+..+++.+ +..++.++|++.|+
T Consensus 316 lggG~Pigav~g~~-ei~-~~~~~~~~~~~~-----~T~~gnp--l~~aAala~L~~l~~~~~~~-~~~~~g~~l~~~L~ 385 (474)
T PLN02482 316 IGGGLPVGAYGGRR-EIM-EMVAPAGPMYQA-----GTLSGNP--LAMTAGIHTLKRLQQPGTYE-YLDKITKKLIQGIL 385 (474)
T ss_pred hhCCCceEEEEEcH-HHH-HhhccCCCcccc-----cCcchhH--HHHHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHH
Confidence 87767788887653 222 222110 00111 1111211 12333456667675544322 77788889988887
Q ss_pred hc
Q 017569 358 HS 359 (369)
Q Consensus 358 ~~ 359 (369)
++
T Consensus 386 ~l 387 (474)
T PLN02482 386 EA 387 (474)
T ss_pred HH
Confidence 65
No 334
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.85 E-value=1.2e-06 Score=86.78 Aligned_cols=266 Identities=11% Similarity=-0.083 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-.+... +....+.+.++.+.+.+++.... ....++++|+||+-.|++.++.....
T Consensus 62 h~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseA~e~AlklAr~~~~~--- 132 (442)
T PRK13360 62 HGRPEIVEAVRAQAGELDYAPA-FQMGHPKAFELANRIAEIAPGGL-----NHVFFTNSGSESVDTALKIALAYHRA--- 132 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCccc-CCcCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 4467788888887765322111 11123334466677877763221 24789999999999999998874221
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHhhhc------------ceeEEEeccCC--c--cc--------cCHHHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEG--Y--YV--------MNPVKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~--~--~~--------~d~~~L~~~i~- 200 (369)
.|. ..+.+||.-..+ |-...-++...| -.+..+|...+ . +. -..++|++++.
T Consensus 133 -~g~-~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 133 -RGE-GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred -cCC-CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 111 113456654443 432222221111 12334443210 0 10 02467788775
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCCcEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Dsi 271 (369)
++..+|++.......|.+.| +++|.++|+++ ++++++|+++.|+-. . +..-+ .+. + ..|.+
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~------g~llI~DEv~tG~GrtG~~~a~~-~~g--v-~PDiv 280 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH------GILLIFDEVITGFGRLGAPFAAQ-YFG--V-TPDLL 280 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCCCccchhhh-hcC--C-CCcee
Confidence 23556776666666677777 99999999999 999999999854322 1 11101 011 2 35766
Q ss_pred EEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 272 NVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 272 ~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
+ ..|.+.+. ...|.++++++ .. +.+..............|..+ . ....++..++|+.+..+++.+ +..++.+
T Consensus 281 t--~gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~~~~~~~~~T~~g-~-pl~~aaa~a~L~~l~~~~l~~-~~~~~g~ 353 (442)
T PRK13360 281 T--CAKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEAGIEFFHGYTYSG-H-PLACAAALATLDLYEREGLLT-RAARLAP 353 (442)
T ss_pred e--eeeccccCccceEEEEEcHH-HH-HHhhcCCccccccccCCCCCC-C-HHHHHHHHHHHHHHHhCCHHH-HHHHHHH
Confidence 6 47877644 34666766542 21 222111100000000112212 2 222455556777776665433 7888889
Q ss_pred HHHHHHHhcC
Q 017569 351 LSSFFVIHSS 360 (369)
Q Consensus 351 ~l~~~L~~~g 360 (369)
+|++.|+++.
T Consensus 354 ~l~~~l~~l~ 363 (442)
T PRK13360 354 YWEDALHSLR 363 (442)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 335
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.85 E-value=3e-07 Score=90.74 Aligned_cols=199 Identities=10% Similarity=-0.097 Sum_probs=111.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++....... .....-..++.+++.++.+.+.. ....++++|++|+..|+..++...
T Consensus 57 h~~~~i~~a~~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~~----~~~~f~~sGsea~e~Alklar~~~----- 126 (425)
T PRK08088 57 HLHPKVVAAVEAQLKKLSHTCFQ-VLAYEPYLELCEKMNQKVPGDFA----KKTLLVTTGSEAVENAVKIARAAT----- 126 (425)
T ss_pred CCCHHHHHHHHHHHhhCCCcccc-ccCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHHh-----
Confidence 34677888888888653321111 11112233677778887764321 247889999999999999987631
Q ss_pred hcCCCCCCCe-EEecCCCcchHHHHHhhhc--------c-----eeEE--EeccCCcccc--CHHHHHHHHh-----hcC
Q 017569 147 EQGKPYDKPN-IVTGANVQVCWEKFARYFE--------V-----ELKE--VKLEEGYYVM--NPVKAVELVD-----ENT 203 (369)
Q Consensus 147 ~~g~~~~~~~-Vi~s~~~h~s~~~~~~~~G--------~-----~v~~--v~~~~~~~~~--d~~~L~~~i~-----~~~ 203 (369)
| +.. |.+....|-....+....+ . ++.. +|.+..+... ++++|++.++ ++.
T Consensus 127 --~----r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 200 (425)
T PRK08088 127 --K----RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDI 200 (425)
T ss_pred --C----CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCce
Confidence 1 233 4444444544333322211 0 0111 2222111111 1566888885 234
Q ss_pred cEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC
Q 017569 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l 279 (369)
.+|++.-.....|.+.+ +++|.++|+++ +++++.|.+|+++... ..-..++..-...|. .+..|.+
T Consensus 201 aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~------~~~lI~Dev~~g~g~~--g~~~~~~~~~~~pdi--~s~sK~l 270 (425)
T PRK08088 201 AAIIIEPVQGEGGFYAASPAFMQRLRALCDEH------GIMLIADEVQTGAGRT--GTLFAMEQMGVAADL--TTFAKSI 270 (425)
T ss_pred EEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC--cchhHHhhcCCCCCE--EEEeccc
Confidence 55555554444455544 99999999999 9999999999864221 100011111112443 3457888
Q ss_pred CCCCCeEEEEEe
Q 017569 280 LVYAGVGWVVWR 291 (369)
Q Consensus 280 ~~p~g~g~l~~~ 291 (369)
.+.+..|+++.+
T Consensus 271 ~~G~rig~v~~~ 282 (425)
T PRK08088 271 AGGFPLAGVTGR 282 (425)
T ss_pred cCCCcceeeEec
Confidence 777888999874
No 336
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.84 E-value=1.3e-06 Score=86.32 Aligned_cols=256 Identities=11% Similarity=-0.051 Sum_probs=135.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.++........ ........++.+.+.+++..+... .....+ +++|+||+..|++.+|..
T Consensus 55 h~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGseA~e~AlklAr~~----- 126 (425)
T PRK09264 55 HNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILKPRGL--DYKVQFTGPTGTNAVEAALKLARKV----- 126 (425)
T ss_pred CCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcCCcCC--CceEEEeCCCHHHHHHHHHHHHHHh-----
Confidence 44688888888877642211111 112234445666677765332110 012445 479999999999999764
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHhhh---------cc---eeEEEeccCC-ccc-cCHHHHHHHHhh------cCc
Q 017569 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYF---------EV---ELKEVKLEEG-YYV-MNPVKAVELVDE------NTI 204 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~---------G~---~v~~v~~~~~-~~~-~d~~~L~~~i~~------~~~ 204 (369)
.| +.+|+.-.. .|-...-++... |. .+..+|.... ... -|+++|++.+++ +..
T Consensus 127 --tg----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a 200 (425)
T PRK09264 127 --TG----RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPA 200 (425)
T ss_pred --cC----CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceE
Confidence 12 355665444 343322222221 11 2445554321 001 267888888853 345
Q ss_pred EEEEeeCCCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|++.-.....|.+ +.+++|.++|+++ |+++++|+++.++.. ......++..-...|.+++ .|.++
T Consensus 201 avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Gr--tG~~~~~~~~~v~PDi~t~--~K~l~ 270 (425)
T PRK09264 201 AVIVETVQGEGGINVASAEWLQRLAKLCRKH------DILLIVDDIQAGCGR--TGTFFSFERAGITPDIVTL--SKSIS 270 (425)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEechhhCCcc--ccHHHHHhhcCCCCCEEEe--ccccC
Confidence 66666555555654 3699999999999 999999999976421 0000001111114577776 48775
Q ss_pred C-CCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHH-HHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 281 V-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF-IRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 281 ~-p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l-~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+ ....|++++++. . . .+. ....+ .++ .+. ....++..+++ ..+..+++.+ +..++.++|+++|++
T Consensus 271 ~~G~pigav~~~~~-i-~-~~~--~~~~~---~T~--~gn--p~~~aaa~a~l~~~~~~~~l~~-~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 271 GYGLPMALVLIKPE-L-D-VWK--PGEHN---GTF--RGN--NLAFVTATAALEEYWSDDAFEK-EVKAKGELVRERLEE 337 (425)
T ss_pred CCccceEEEEEchh-h-h-ccC--CCccC---CCC--CCC--HHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHH
Confidence 4 555688888643 2 1 211 10101 111 111 11233344555 3333333333 667777888887765
Q ss_pred c
Q 017569 359 S 359 (369)
Q Consensus 359 ~ 359 (369)
+
T Consensus 338 l 338 (425)
T PRK09264 338 I 338 (425)
T ss_pred H
Confidence 3
No 337
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.84 E-value=8.4e-07 Score=87.93 Aligned_cols=264 Identities=12% Similarity=-0.048 Sum_probs=141.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-.+... .....+...++.+.|.+++..+. ....++++|+||+..|++.++..+..+
T Consensus 65 h~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~~-- 136 (445)
T PRK09221 65 HGRPEIVEAVARQAATLDYAPA-FQMGHPLAFELAERLAELAPGGL-----DHVFFTNSGSESVDTALKIALAYHRAR-- 136 (445)
T ss_pred CCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 4457788888887765322211 11122334456677777764321 248899999999999999988753211
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccC--Cc--cc--------cCHHHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEE--GY--YV--------MNPVKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~--~~--~~--------~d~~~L~~~i~- 200 (369)
|.+ .+.+|+.-.. .|-...-+....| .++..+|... .. +. -..+++++.++
T Consensus 137 --g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 213 (445)
T PRK09221 137 --GQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVAL 213 (445)
T ss_pred --CCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHh
Confidence 111 1345554443 3432222221111 1133343221 00 00 12357777775
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc---cccCCCccccccCCCCcE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA---PFLYPDLEWDFRLPLVKS 270 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~---~~~~~~~~~~~~~~~~Ds 270 (369)
++..+|++.-.....|.+.| +++|.++|+++ ++++++|+++.|+-. .|... .+. + ..|.
T Consensus 214 ~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tG~GRtG~~~~~~--~~g--v-~PDi 282 (445)
T PRK09221 214 HDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH------GILLIFDEVITGFGRLGAAFAAE--RFG--V-TPDI 282 (445)
T ss_pred cCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCCcCchhhHHH--hcC--C-CCCE
Confidence 24567777777777788877 99999999999 999999999865321 11111 011 1 2476
Q ss_pred EEEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHH
Q 017569 271 INVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHK 349 (369)
Q Consensus 271 i~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a 349 (369)
++ ..|.+.+. ...|.++.+++ .. +.+.....+........|..+ .+. ..++..++|+.+..+++.+ +..++.
T Consensus 283 ~~--~gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~~T~~~-~pl-~~aaa~a~L~~i~~~~l~~-~~~~~g 355 (445)
T PRK09221 283 IT--FAKGLTNGAIPMGAVIASDE-IY-DAFMQGPEYAIEFFHGYTYSA-HPV-ACAAGLATLDIYREEDLFE-RAAELA 355 (445)
T ss_pred EE--eccccccCcccceeeEEcHH-HH-HhhccCcccccccccccCCCc-CHH-HHHHHHHHHHHHHhccHHH-HHHHHH
Confidence 66 45666443 23566666532 22 222111111000000112112 222 2333446777776555422 888999
Q ss_pred HHHHHHHHhc
Q 017569 350 KLSSFFVIHS 359 (369)
Q Consensus 350 ~~l~~~L~~~ 359 (369)
++|++.|+++
T Consensus 356 ~~l~~~l~~l 365 (445)
T PRK09221 356 PYFEDAVHSL 365 (445)
T ss_pred HHHHHHHHhh
Confidence 9999999876
No 338
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.84 E-value=1.4e-06 Score=83.47 Aligned_cols=259 Identities=13% Similarity=-0.059 Sum_probs=141.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...... ..........++.++|.++++-.. ....++++|+||+-.|++.++..+..+ .
T Consensus 32 h~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~Alkla~~~~~~~-~ 104 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPGGL-----DRVFFANSGSEAVEAALKLARQYHNKR-A 104 (339)
T ss_dssp BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHT-H
T ss_pred CCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccccc-----ceeeeccCchHHHHHHHHHhhcccccc-c
Confidence 345778888888776543222 112223334467777888883322 348999999999999999998332211 1
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCCcc----ccCHHHHHHHH----hhcCcE
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYY----VMNPVKAVELV----DENTIC 205 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~----~~d~~~L~~~i----~~~~~~ 205 (369)
..| +.+|+.-.. .|-....++...+ -.+..+|...... .-...++++.+ .++..+
T Consensus 105 ~~~----r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 105 YTG----RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HHT----TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred ccC----CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 112 456665544 4432222222111 1356677653100 01122233333 234556
Q ss_pred EEEeeCCCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC
Q 017569 206 VAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (369)
Q Consensus 206 v~~~~~~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~ 281 (369)
|++.-.....|.+ +-+++|.++|+++ |+++++|+++.|+.. ...-..+...-...|.++++ |.+.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tG~gR--tG~~~a~~~~gv~PDiv~~g--K~l~g 250 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREH------GILLIADEVQTGFGR--TGKFFASEHYGVDPDIVTFG--KGLGG 250 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHT------T-EEEEEETTTTTTT--TSSSSGHHHHTSSSSEEEEE--GGGGT
T ss_pred EEEeccccccCccccccchhhehccccccc------ccceecccccccccc--cCCccceecccccCcccccc--cchhh
Confidence 6666655555655 2389999999999 999999999887533 11111111112246999975 88777
Q ss_pred CCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
....|.++++++ .. ..+.. .. .+ .++ .+ +....++...+|+.+..+++.+ +..++..+|+++|++
T Consensus 251 G~p~sav~~~~~-i~-~~~~~-~~-~~---~T~--~g--~p~~~aaa~~~l~~~~~~~~~~-~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 251 GLPISAVLGSEE-IM-EAFQP-GS-HG---STF--GG--NPLSCAAALATLEILEEEDLLE-RVRELGERLREGLRE 315 (339)
T ss_dssp TSSEEEEEEEHH-HH-TTSCT-TS-ST---CTT--TT---HHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHH
T ss_pred hhhcccccccch-hh-ccccc-cc-cc---ccc--cc--chHhhhhhhhHHHhhccHHHHH-HHHHHHHHHHHHHHH
Confidence 788899988753 11 11100 00 10 111 11 1123445556666666655444 666667777777764
No 339
>PRK05965 hypothetical protein; Provisional
Probab=98.83 E-value=1.7e-06 Score=86.12 Aligned_cols=268 Identities=10% Similarity=-0.074 Sum_probs=144.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-.+....+....+...++.+.|.+++..+. ....++++|+||+-.|++.+|..+..
T Consensus 62 h~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGSEAve~AlKlAr~~~~~--- 133 (459)
T PRK05965 62 YGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-----NHVYFTLGGSDAVDSAVRFIRHYWNA--- 133 (459)
T ss_pred CCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCChhHHHHHHHHHHHHHHHh---
Confidence 4468888888888865332211111223334456666777753221 24899999999999999999875421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccC-Cc--cccC--------HHHHHHHHhh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEE-GY--YVMN--------PVKAVELVDE- 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~-~~--~~~d--------~~~L~~~i~~- 201 (369)
.|.. .+.+|+.-.. .|-....+....|. .+..+|... .. +.-| ++++++.+..
T Consensus 134 -~g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 211 (459)
T PRK05965 134 -TGRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL 211 (459)
T ss_pred -cCCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 1211 1345665443 44332222222111 123343321 00 0112 3577777752
Q ss_pred ---cCcEEEEeeCCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 202 ---NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 202 ---~~~~v~~~~~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+..+|++.-.....|.+. -+++|.++|+++ |+++|+|+++.|+-. ...-..+...-...|.++
T Consensus 212 ~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfGR--tG~~~a~~~~gv~PDiv~-- 281 (459)
T PRK05965 212 GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL------GILFVADEVITGFGR--TGPLFACEAEGVVPDLMT-- 281 (459)
T ss_pred CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhccCcc--CchhhhHhhcCCCCCeEE--
Confidence 346666665555556553 389999999999 999999999877532 100001111111468888
Q ss_pred CccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHH
Q 017569 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSS 353 (369)
Q Consensus 275 ~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~ 353 (369)
..|.+.+.+ ..|.++.+++ .. ..+.......+...-..|..|.. . ..++..++|+.+..+++.+ +..++..+|.
T Consensus 282 ~gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~~gnp-l-~~Aaa~a~L~~l~~~~l~~-~~~~~g~~l~ 356 (459)
T PRK05965 282 VAKGLTSGYVPMGAVLMSDH-VY-QGIADGAGAAAPVGHGYTYSAHP-V-SAAVGLEVLRLYHEGGLLA-NGQKAGPRFA 356 (459)
T ss_pred echhhccCCcceeEEEEcHH-HH-HHHhccccccccccccCCCCCCH-H-HHHHHHHHHHHHHhccHHH-HHHHHHHHHH
Confidence 468877774 6788887643 22 12211100000000011111211 1 2344446666676655443 7888889999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|+++
T Consensus 357 ~~l~~l 362 (459)
T PRK05965 357 AGLDAL 362 (459)
T ss_pred HHHHhh
Confidence 999875
No 340
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.81 E-value=1.5e-06 Score=86.07 Aligned_cols=253 Identities=9% Similarity=-0.004 Sum_probs=137.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++........ ....+...++.+.|.+++..... ......++++|+||+..|++.++..
T Consensus 55 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~--~~~~~f~~~sGsEA~e~AlklAr~~------ 125 (442)
T TIGR00709 55 HNHPNMKQKILDYLQSGLPLHTL-DLTTPLKDAFIEALLNIIPKRKM--DYKLQFPGPSGADAVEAAIKLAKTY------ 125 (442)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCcCC--CccEEEeCCCHHHHHHHHHHHHHHh------
Confidence 44678888888877653321111 11233444566778887643210 0012344589999999999998874
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhc------------ceeEEEeccCCcccc--------CH----HHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEGYYVM--------NP----VKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~--------d~----~~L~~~i~- 200 (369)
.| +.+|+.-. ..|-...-++...| .++..+|... ..+. +. +.+++.++
T Consensus 126 -tg----r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (442)
T TIGR00709 126 -TG----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH-EYRCPFGIGGEAGSNASIEYFENFIED 199 (442)
T ss_pred -cC----CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc-cccccccCCchhHHHHHHHHHHHHHHh
Confidence 12 35566544 44444333333322 1233444321 1111 11 22344443
Q ss_pred -----hcCcEEEEeeCCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcE
Q 017569 201 -----ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKS 270 (369)
Q Consensus 201 -----~~~~~v~~~~~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds 270 (369)
++..+|++.......|.+. -+++|.++|+++ |+++|.|+++.++.. ...-..+ .+.+ ..|.
T Consensus 200 ~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv-~PDi 270 (442)
T TIGR00709 200 VESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH------DIKLILDEVQAGFGR--SGTMFAFEHAGI-EPDF 270 (442)
T ss_pred hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CCchhHHHHcCC-CCcE
Confidence 2455666666656656552 399999999999 999999999887533 1110011 1112 4688
Q ss_pred EEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
++ ..|.+++.+..|+++.+++ . ..+. ....+ .++ .+ +.....+.-++|+.+..+++.+ +..++.+
T Consensus 271 v~--~gK~l~~G~Pigav~~~~~-~--~~~~--~~~~~---~T~--~g--npla~aaa~a~L~~i~~~~l~~-~~~~~g~ 335 (442)
T TIGR00709 271 VV--MSKAVGGGLPLAVLLIAPE-F--DAWQ--PAGHT---GTF--RG--NQLAMVTGTEALNYWKDDNLAQ-NAQERGE 335 (442)
T ss_pred EE--EcccccCCcccEEEEEchH-H--hccC--CCcCC---CCC--Cc--CHHHHHHHHHHHHHHHhcCHHH-HHHHHHH
Confidence 78 5687777788899988654 2 2211 11100 111 11 1122334445566665555443 7777788
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 336 ~l~~~L~~ 343 (442)
T TIGR00709 336 RITSFLDD 343 (442)
T ss_pred HHHHHHHH
Confidence 88888875
No 341
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.81 E-value=1.7e-07 Score=84.46 Aligned_cols=247 Identities=12% Similarity=-0.018 Sum_probs=151.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|++.++-..++.+........ -++..+.+.+...++++-+.++ .++..++=.||.-++.+++.+
T Consensus 81 sshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED-------~ilypscfdANag~feail~p--- 150 (417)
T KOG1359|consen 81 SSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED-------TILYPSCFDANAGAFEAILTP--- 150 (417)
T ss_pred cCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc-------eEEeccccccchHHHHHhcCh---
Confidence 446788887777777654433322 2667777777778999988875 677788888887777777553
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCcccCC
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFE 219 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~ 219 (369)
.+.|+..+.-|.|+....+++. . ...+|+..|+..+.+ +-++|+-...-+.-|-+.
T Consensus 151 ----------edAvfSDeLNhASIIdGirLck---------r-y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdia 210 (417)
T KOG1359|consen 151 ----------EDAVFSDELNHASIIDGIRLCK---------R-YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIA 210 (417)
T ss_pred ----------hhhhhccccccchhhhhhHHHh---------h-hccchhHHHHHHHHHhhhheEEEEEecceeccCCCcc
Confidence 2456666678888887776643 1 356777778876654 334555444556778999
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~ 298 (369)
|+++|++++++| +.++++|.|++-+++.-......-.+. ...+|.+.....|.+++..| |+... .+.+. .
T Consensus 211 Pl~ei~~La~kY------gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttg-p~~li-~ 281 (417)
T KOG1359|consen 211 PLEEISQLAKKY------GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTG-PKPLI-S 281 (417)
T ss_pred cHHHHHHHHHhc------CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccC-ChhHH-H
Confidence 999999999999 999999999986654211111112233 44688888889999875544 44433 33332 1
Q ss_pred ccc-cccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 299 ELV-FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 299 ~~~-~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
-+. ..-+|+..+.--+. - ...+++++..+. .. -..+ +...+.+++++.+.+.||
T Consensus 282 llrqr~RpylFSnslppa----v-V~~a~ka~dllm--~s--~~~i~~~~a~~qrfr~~me~aGf 337 (417)
T KOG1359|consen 282 LLRQRSRPYLFSNSLPPA----V-VGMAAKAYDLLM--VS--SKEIQSRQANTQRFREFMEAAGF 337 (417)
T ss_pred HHHhcCCceeecCCCChh----h-hhhhHHHHHHHH--hh--HHHHHHHHHHHHHHHHHHHhcCc
Confidence 222 23356544321000 0 011222222111 11 1222 667777788888877775
No 342
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.81 E-value=2.5e-06 Score=84.13 Aligned_cols=255 Identities=11% Similarity=-0.068 Sum_probs=137.6
Q ss_pred CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
+..+|.+.+++.+.+++..+... .....+...++.+.+.+++.-+. .....++++|+||+..|++.++..
T Consensus 55 Gh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~SGseA~e~AlklAr~~----- 124 (425)
T PRK07495 55 GHRHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDF----AKKTIFVTTGAEAVENAVKIARAA----- 124 (425)
T ss_pred CCCCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHh-----
Confidence 34568888888888765332111 11122333456666777764321 024899999999999999998764
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHhhhc-------------ceeEEEeccCCccccC----HHHHHHHHh-----hc
Q 017569 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEGYYVMN----PVKAVELVD-----EN 202 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~~d----~~~L~~~i~-----~~ 202 (369)
.| +++|+.-.. .|-...-+....| .++..+|...+...++ ++++++.+. ++
T Consensus 125 --tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~ 198 (425)
T PRK07495 125 --TG----RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQR 198 (425)
T ss_pred --hC----CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCc
Confidence 12 345665443 3433222222111 1244555532111122 455677764 23
Q ss_pred CcEEEEeeCCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccC
Q 017569 203 TICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY 278 (369)
Q Consensus 203 ~~~v~~~~~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~ 278 (369)
..+|++.-....+|.+. -+++|.++|+++ ++++++|+++.++.. ...-..++..-...|.++ ..|.
T Consensus 199 iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr--~G~~~a~~~~gv~pDi~t--lsK~ 268 (425)
T PRK07495 199 VAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH------GILLIADEVQTGFAR--TGKLFAMEHHEVAADLTT--MAKG 268 (425)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--CCCceeecccCCCCCEEe--ehhh
Confidence 55666555444556442 399999999999 999999999886432 111001111111356655 4688
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 279 l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+.+....|+++.+++ .. +.+. .... ..|..+. .....+..++++.+..+++.+ +..++.++|+++|++
T Consensus 269 l~~G~pigav~~~~~-i~-~~~~--~~~~-----~~T~~~~--pl~~aaa~a~l~~l~~~~l~~-~~~~~g~~l~~~L~~ 336 (425)
T PRK07495 269 LAGGFPLAAVTGRAE-IM-DAPG--PGGL-----GGTYGGN--PLGIAAAHAVLDVIEEEDLCE-RANQLGNRLKQRLAS 336 (425)
T ss_pred hcCCccceEEEEcHH-HH-hccC--CCCc-----CCCCCCC--HHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHHH
Confidence 776677888887542 22 2211 1000 1111111 112333346677776555444 666677777777765
No 343
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.80 E-value=1.7e-08 Score=89.72 Aligned_cols=233 Identities=14% Similarity=0.048 Sum_probs=152.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh
Q 017569 93 TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR 172 (369)
Q Consensus 93 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~ 172 (369)
...+..+.....-++.|...-. +.+.+-..+| +++.+++...|.+.+ +...|+.+.....|..+.+-
T Consensus 55 l~~isne~a~~~i~l~glhav~-nc~vvpl~tg--mslslc~~s~r~krp----------kakyiiw~ridqks~~ksi~ 121 (432)
T KOG3843|consen 55 LACISNEFAKDAIHLAGLHAVA-NCFVVPLATG--MSLSLCFLSLRHKRP----------KAKYIIWLRIDQKSCFKSII 121 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhhh-ceeEEecccc--ccHHHHHHHHhhcCC----------cccEEEEEecchHHHHHHHH
Confidence 3445555555566777776411 1122223334 566677777766411 11257888888888888888
Q ss_pred hhcceeEEEec--cCCccccCHHHHHHHHhhc-CcEEEEeeCCCCccc---CCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 173 YFEVELKEVKL--EEGYYVMNPVKAVELVDEN-TICVAAILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 173 ~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~~-~~~v~~~~~~~~tG~---~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
..|++++.|.- +.|....|++.+++.|++. +.+|...+.+|.+-+ .|.+++|+.+|..| +++-+|..|
T Consensus 122 ~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~------diphivnna 195 (432)
T KOG3843|consen 122 HAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH------DIPHIVNNA 195 (432)
T ss_pred hcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc------Cchhhhccc
Confidence 88999777763 4466788999999999873 455555555554443 48899999999999 999999999
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHH
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQII 326 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l 326 (369)
||......+. .........++|.++-+..|.+++|.|.+++..-+...+ +. ....|.+... ..+.+
T Consensus 196 yglqsee~i~-~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~i-q~--iak~ypgras----------a~ps~ 261 (432)
T KOG3843|consen 196 YGLQSEECIH-KIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFI-QE--IAKMYPGRAS----------ASPSL 261 (432)
T ss_pred cccchHHHHH-HHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHH-HH--HHHhCCCccc----------cCccH
Confidence 9964321111 011112266899999999999999999766654332222 11 1234554432 23456
Q ss_pred HHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 327 AQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 327 ~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
-+...|..+|..+|.+. .-.+|--|++.++.+
T Consensus 262 dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 262 DLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788899999999888 666777777777654
No 344
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.78 E-value=1.7e-06 Score=85.30 Aligned_cols=200 Identities=13% Similarity=-0.044 Sum_probs=115.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++..... ......+-+.++.+.|.+++.... .....++++|+||+..|++.++..
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~sGseA~e~AlklAr~~------ 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTC-FMVTPYEGYVALAEKLNRIAPGSG----PKKSVFFNSGAEAVENAVKIARSY------ 117 (420)
T ss_pred CCCHHHHHHHHHHHHhccCcc-ccccCChHHHHHHHHHHHhCCCCC----CCEEEEeCCcHHHHHHHHHHHHHh------
Confidence 445788888888876533211 111112223355566777663211 124799999999999999998764
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHhhhc--------c-----eeEEEeccCC----------ccccCHHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFE--------V-----ELKEVKLEEG----------YYVMNPVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G--------~-----~v~~v~~~~~----------~~~~d~~~L~~~i~-- 200 (369)
.| +++|+.- ...|-...-++...| . ++..+|.... .+.-+++.+++.+.
T Consensus 118 -tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
T TIGR00700 118 -TG----RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID 192 (420)
T ss_pred -cC----CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh
Confidence 12 3455543 444443333332211 1 1333443210 01112566777663
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
++..+|++.-....+|.+.+ +++|.++|+++ ++++++|++|.++.. ...-..+...-...|.++
T Consensus 193 ~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tg~gr--~g~~~a~~~~~~~pDi~~- 263 (420)
T TIGR00700 193 VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH------GIVFIADEVQTGFAR--TGAMFACEHEGPEPDLIT- 263 (420)
T ss_pred cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--cchhHHHhhcCCCCCEEE-
Confidence 24566776666666676644 99999999999 999999999987533 110001111112467655
Q ss_pred cCccCCCCCCCeEEEEEeC
Q 017569 274 SGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 274 ~~hK~l~~p~g~g~l~~~~ 292 (369)
..|.+.+.+..|+++.++
T Consensus 264 -lsK~l~~G~pig~v~~~~ 281 (420)
T TIGR00700 264 -TAKSLADGLPLSGVTGRA 281 (420)
T ss_pred -eeccccCCcceEEEEecH
Confidence 678887778899998754
No 345
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=2.7e-08 Score=88.19 Aligned_cols=114 Identities=20% Similarity=0.163 Sum_probs=97.2
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~ 198 (369)
...+..|+.|.+-+.+++.+.+ | +.+|+...|+|..|.-.+...+++|+.+|.+++ |.++++++.+.
T Consensus 88 nic~GvGsDE~ID~iiR~~c~P--------G----keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pd-F~lnvdai~ev 154 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDP--------G----KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPD-FSLNVDAIAEV 154 (375)
T ss_pred ceEEecCcHHHHHHHHhheecC--------C----ccceeecCCcceeEEEEeecCCceEEEecCCCC-ccccHHHHHHH
Confidence 4788889999999999998774 2 468999999998887788889999999999986 99999999998
Q ss_pred Hhh--cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccc
Q 017569 199 VDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (369)
Q Consensus 199 i~~--~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~ 250 (369)
+.. .++++++++|.||||.+-..+.|-++.+-. . +..++||+||-.+
T Consensus 155 l~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p-~----nglVVvDEAYidF 203 (375)
T KOG0633|consen 155 LELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMP-D----NGLVVVDEAYIDF 203 (375)
T ss_pred HhccccceEEEEcCCCCCCcccccHHHHHHHHhCC-C----CcEEEEeeeeEee
Confidence 865 579999999999999998888888888643 2 7899999998654
No 346
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=4.9e-08 Score=92.65 Aligned_cols=228 Identities=11% Similarity=-0.018 Sum_probs=138.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~ 171 (369)
+..++.+++.+.+|+++|.+. ..++..| -..|.+.+-++..+ +..|+-.+..|.|+...|
T Consensus 179 G~~~~hkelE~l~A~f~g~e~------a~vF~mG-f~TNs~~~p~l~~~-------------gsLIiSDelNHaSi~~Ga 238 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVED------AIVFSMG-FATNSMNIPSLLGK-------------GSLIISDELNHASLITGA 238 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcc------eEEEecc-ccccccCcceeecC-------------Ccceeeccccchheeccc
Confidence 667777888888999999986 1344433 44444444444331 346666778899999999
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhh-------cC-----cE-EEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NT-----IC-VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~~-----~~-v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~ 238 (369)
++-|+.++...-+ |..+||+.+.+ +| ++ |++-.-...-|.+.++.++.+++|++ .
T Consensus 239 RLSgAtiRVfkHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky------k 306 (519)
T KOG1357|consen 239 RLSGATTRVFRHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY------K 306 (519)
T ss_pred cccCceEEEEecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc------c
Confidence 9999999888765 34556665553 22 33 33333444779999999999999999 9
Q ss_pred ceEEeecccccccccccCCCc--cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccc
Q 017569 239 TPIHVDAASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL 316 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l 316 (369)
.+++.|+|++.++.+-..... -+..+...+|.+-.-+-|.+++.. |.+ ..+++.. +.+.....+.-...
T Consensus 307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G--Gyi-agsk~li-d~lrt~s~~~~yat----- 377 (519)
T KOG1357|consen 307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG--GYI-AGSKELI-DYLRTPSPSALYAT----- 377 (519)
T ss_pred EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc--cee-cCcHHHH-hhhccCCCceeecc-----
Confidence 999999999887763111000 011112346666666777765222 334 3333222 22222222211111
Q ss_pred cCCcchhHHHHHHHHHHHh-cHh----hHHHH-HhhHHHHHHHHHHHhcCCC
Q 017569 317 NFSKGSSQIIAQYYQFIRL-GFE----VIPSF-CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 317 ~~tr~~~~~l~~~~~l~~l-g~~----G~~~~-~~~~~a~~l~~~L~~~g~~ 362 (369)
+-+...+-....+++.+ |++ |-+++ +..++.+|++..|+..||+
T Consensus 378 --~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfi 427 (519)
T KOG1357|consen 378 --SLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFI 427 (519)
T ss_pred --cCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEE
Confidence 11222223333555655 433 33444 9999999999999999886
No 347
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.77 E-value=6e-07 Score=83.75 Aligned_cols=231 Identities=16% Similarity=0.087 Sum_probs=139.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc-hHHHHHHHHHHHHHHHHHHHhcCCCCCCC--eEEecCCCcchH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS-SEAIMLAGLAFKRKWQQKRKEQGKPYDKP--NIVTGANVQVCW 167 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg-t~a~~~al~~~~~~~~~~~~~~g~~~~~~--~Vi~s~~~h~s~ 167 (369)
....++-.++.+.++++++.|.+ +.+.+..|| |....++.+.+... +. -|....-+..++
T Consensus 46 k~~~~v~~~a~~~lreLl~iPd~----Y~VlflqGGat~qf~~~p~nLl~~-------------~~~~yv~~g~Ws~~a~ 108 (365)
T COG1932 46 KEFKNVLEEAEKDLRELLNIPDD----YKVLFLQGGATGQFAMAPMNLLGK-------------RGTDYVDTGAWSEFAI 108 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCccHHHHHHHHHhhhcc-------------cCceeEeeeehhHhHH
Confidence 34566667788899999999974 456666654 55555566655442 11 133333333444
Q ss_pred HHHHhhhc-ceeEEEeccC--CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC-HHHHHHHHHHhhhccCCCceEEe
Q 017569 168 EKFARYFE-VELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 168 ~~~~~~~G-~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~-l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
..+-++.. ..+..+...+ ....+++++.+ +.++..+|..++..|.+|+--| ... . +.+..+++
T Consensus 109 ~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~-------~----~~~~~~v~ 175 (365)
T COG1932 109 KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPD-------I----GSDGLLVA 175 (365)
T ss_pred HHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCC-------C----CCCceEEE
Confidence 44433322 2222222111 22455665554 4455667999999999998643 111 1 11478999
Q ss_pred ecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc----cccccCccCCCCCCccccCC
Q 017569 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE----LVFHINYLGSDQPTFTLNFS 319 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~----~~~~~~y~~~~~~~~~l~~t 319 (369)
|+..+.+.. ++| +...|.+..+.+|.+ +|-|.+++++|+. .+.+. +.....|......+ .+=.|
T Consensus 176 D~SS~ilsr-------~iD--vsk~dviyagaQKnl-GpaGltvvIvr~~-~l~r~~~~~~P~if~y~~~~~~~-s~yNT 243 (365)
T COG1932 176 DASSAILSR-------PID--VSKYDVIYAGAQKNL-GPAGLTVVIVRPD-LLERAESYTLPSIFDYLTHADNG-SMYNT 243 (365)
T ss_pred ecccHHhcC-------CCC--hhHcceEEEehhhcc-CccceEEEEEcHH-HHhcccccCCchHhhchhhhccC-CccCC
Confidence 998776443 233 457899999999998 7888999999864 22211 11122333322211 11146
Q ss_pred cchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 320 KGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 320 r~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
++.....-+...++.+..+ |++.+ |..+.|+.|++.+.+++|..
T Consensus 244 Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~ 290 (365)
T COG1932 244 PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYR 290 (365)
T ss_pred cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 6555444444677777444 77877 99999999999999997764
No 348
>PRK06062 hypothetical protein; Provisional
Probab=98.76 E-value=1.9e-06 Score=85.56 Aligned_cols=252 Identities=10% Similarity=-0.032 Sum_probs=140.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++........ ...+...++.+.|.++...+. ....++++|+||+..|++.+|...
T Consensus 69 h~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t----- 136 (451)
T PRK06062 69 HQHPKVVAAIQEQAARLCTVAPA--HANDARSEAARLIAERAPGDL-----SKVFFTNGGADANEHAVRMARLHT----- 136 (451)
T ss_pred CCCHHHHHHHHHHHHhcCCcCCc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCChHHHHHHHHHHHHHhh-----
Confidence 44577888888877653221111 223334456666777764321 248999999999999999987641
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc-----------eeEEEeccCCccc------cC-------HHHHHHHHhh
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-----------ELKEVKLEEGYYV------MN-------PVKAVELVDE 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-----------~v~~v~~~~~~~~------~d-------~~~L~~~i~~ 201 (369)
| +.+|+.-.. .|-....++...|. ++..++... .++ -| +++|++.++.
T Consensus 137 --g----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 137 --G----RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPF-LYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred --C----CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCC-ccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 1 355665443 34333333322221 122332211 011 12 6778888852
Q ss_pred ----cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEE
Q 017569 202 ----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSIN 272 (369)
Q Consensus 202 ----~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~ 272 (369)
+..+|++.-.....|.+.| +++|.++|+++ |+++++|+++.++-. ...-..+. +.+ ..|.++
T Consensus 210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--tG~~~a~~~~gv-~PDi~t 280 (451)
T PRK06062 210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH------GIVLIADEVMAGFGR--TGKWFAIEHFGV-VPDLIT 280 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeeccccCCCc--CcHHHHHHhcCC-CCCeee
Confidence 3456666665556677777 99999999999 999999999886422 00000011 112 467776
Q ss_pred EcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHH-H
Q 017569 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHK-K 350 (369)
Q Consensus 273 ~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a-~ 350 (369)
..|.+++.+ ..|.++.++ +.. +.+. ...+. + ..|..+. ....++..++|+.+..+++.+ +..++. +
T Consensus 281 --~gK~lggG~~Pigav~~~~-~i~-~~~~-~~~~~-~---~~T~~gn--pl~~Aaa~a~L~~l~~~~l~~-~~~~~G~~ 348 (451)
T PRK06062 281 --FAKGVNSGYVPLGGVAISE-AIA-ATFA-DRPYP-G---GLTYSGH--PLACAAAVATINAMEEEGIVE-NAARIGAE 348 (451)
T ss_pred --echhhhcCCcCcEEEEEcH-HHH-HHhc-cCCCC-C---CCCCCCC--HHHHHHHHHHHHHHHhcCHHH-HHHHHHHH
Confidence 578887664 567777765 222 2221 11111 1 1111122 222444556677776555433 566665 5
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 349 ~l~~~L~~ 356 (451)
T PRK06062 349 VLGPGLRE 356 (451)
T ss_pred HHHHHHHH
Confidence 77776665
No 349
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.76 E-value=2.6e-06 Score=84.45 Aligned_cols=252 Identities=12% Similarity=-0.021 Sum_probs=139.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++....... ....+.+.++.+.|.+++.... .....++++|+||+..|++.+|...
T Consensus 58 H~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~----~~~v~f~~SGseA~e~AiklAr~~t----- 127 (445)
T PRK08593 58 HAPPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDF----EKRVTFGLSGSDANDGIIKFARAYT----- 127 (445)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHhh-----
Confidence 44688888888887653322111 1123344456666877764321 0247899999999999999987641
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhc-------------ceeEEEeccCCccc-----cC-------HHHHHHHHh
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE-------------VELKEVKLEEGYYV-----MN-------PVKAVELVD 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~-----~d-------~~~L~~~i~ 200 (369)
| +.+|+.-+ ..|-...-++...+ -++..+|.... ++ .+ ++++++.+.
T Consensus 128 --g----r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
T PRK08593 128 --G----RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDK-YRGMYEEPDANFVEEYLAPLKEMFE 200 (445)
T ss_pred --C----CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcc-ccccccCCcHHHHHHHHHHHHHHHH
Confidence 2 34565544 34544333332222 12344543211 10 11 244555443
Q ss_pred -----hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcE
Q 017569 201 -----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKS 270 (369)
Q Consensus 201 -----~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds 270 (369)
++..+|++.-.....|.+.| +++|.++|+++ ++++++|+++.++-. ....... .+.+ ..|.
T Consensus 201 ~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tg~Gr--tG~~~a~~~~gv-~pDi 271 (445)
T PRK08593 201 KYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH------GILFAVDDIQQGLGR--TGKWSSISHFNI-TPDL 271 (445)
T ss_pred hhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CchHHHHHhcCC-CCCE
Confidence 34667777776666677755 99999999999 999999999865321 0000000 1111 3576
Q ss_pred EEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
++ ..|.+.+.+..|+++.+++ .. +.+. ... ..+|..+.. ...++..++|+.+..+++.+ +..++.+
T Consensus 272 ~t--~gK~l~~G~p~gav~~~~~-i~-~~~~-~~~------~~~T~~~~p--l~~aaa~a~l~~l~~~~l~~-~~~~~g~ 337 (445)
T PRK08593 272 MS--FGKSLAGGMPMSAIVGRKE-IM-ESLE-APA------HLFTTGANP--VSCAAALATIDMIEDESLLQ-RSAEKGE 337 (445)
T ss_pred ee--ecccccCCcccEEEEEcHH-HH-hhhc-cCC------CCCCCCCCH--HHHHHHHHHHHHHHhccHHH-HHHHHHH
Confidence 65 5677766566788877532 22 2221 000 111211111 22444556677775554322 7777778
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 338 ~l~~~L~~ 345 (445)
T PRK08593 338 YARKRFDQ 345 (445)
T ss_pred HHHHHHHH
Confidence 88888875
No 350
>PRK07481 hypothetical protein; Provisional
Probab=98.74 E-value=3.8e-06 Score=83.45 Aligned_cols=266 Identities=10% Similarity=0.015 Sum_probs=138.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+.........+.+.++.+.|.++++-+. .....++++|+||+..|++.+|..+..
T Consensus 58 h~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~sGsEAve~AlklAr~~~~~--- 130 (449)
T PRK07481 58 HNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG----MRRVFFSSGGSDSVETALKLARQYWKV--- 130 (449)
T ss_pred CCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC----CCEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 4457788888888765332211101123344456677888764211 124789999999999999999875421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCC---ccc-cCHHH--------HHHHHh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG---YYV-MNPVK--------AVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~-~d~~~--------L~~~i~- 200 (369)
.|.. .+.+|+.-.. .|-...-++...| -++..++.... .+. -|+++ +++.|.
T Consensus 131 -~g~~-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~ 208 (449)
T PRK07481 131 -RGQP-ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF 208 (449)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 1345555443 4433222222111 11333332110 011 13333 444443
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCCcEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Dsi 271 (369)
++..+|++.-.....|.+-| ++++.++|+++ ++++|.|+++.|+-. . ++.-+ .++ + ..|.+
T Consensus 209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~a~~-~~g--v-~PDiv 278 (449)
T PRK07481 209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH------GILLIADEVVTGFGRTGSWFGSR-GWG--V-KPDIM 278 (449)
T ss_pred cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCcCchhhHhh-hcC--C-CCCEE
Confidence 34566776666555566543 99999999999 999999999876432 1 11111 112 2 46887
Q ss_pred EEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 272 NVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 272 ~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
++ .|.+.+.+ ..|.++++++ .. +.+.......+......|..| .+. ..++..++|+.+..+++.+ +..++.+
T Consensus 279 ~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~~g-npl-~~aaa~a~L~~l~~~~l~~-~~~~~g~ 351 (449)
T PRK07481 279 CL--AKGITSGYVPLGATMVNAR-IA-DAFEANADFGGAIMHGYTYSG-HPV-ACAAALATLDIVVREDLPA-NAAKRGA 351 (449)
T ss_pred EE--eecccCCCcCceEEEEcHH-HH-HHHhccCccccccccCCCCCC-CHH-HHHHHHHHHHHHHhhhHHH-HHHHHHH
Confidence 74 68776653 5677877643 21 222111000000000011111 111 2344446666665555433 6777778
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 352 ~l~~~L~~ 359 (449)
T PRK07481 352 YLLEGLQP 359 (449)
T ss_pred HHHHHHHH
Confidence 88887775
No 351
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.73 E-value=3.3e-06 Score=83.21 Aligned_cols=254 Identities=11% Similarity=-0.085 Sum_probs=138.0
Q ss_pred CChHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.+++-... ...++ .+...++.+.+.+++.... .....++++|+||+..|++.++...
T Consensus 56 h~~p~v~~ai~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~----~~~~~f~~sGseA~e~AlklAr~~t---- 125 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQFTHTAYQIVP--YASYVTLAERINALAPIDG----PAKTAFFTTGAEAVENAVKIARAYT---- 125 (421)
T ss_pred CCCHHHHHHHHHHHhhcccccccccC--ChHHHHHHHHHHHhCCCCC----CceEEEeCCcHHHHHHHHHHHHHhh----
Confidence 44677888888887653221 11111 2223355566777764321 1247889999999999999987641
Q ss_pred HhcCCCCCCCeEEecC-CCcchHHHHHhhhcc-------------eeEEEeccCCc----cccCHHHHHHHHhh-----c
Q 017569 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEEGY----YVMNPVKAVELVDE-----N 202 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~~~d~~~L~~~i~~-----~ 202 (369)
| +++|+.-. ..|-...-++...|. .+..+|..... ..-+++.+++.+.+ +
T Consensus 126 ---g----r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 126 ---G----RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred ---C----CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCc
Confidence 1 34565544 344433333322221 12223322100 11246678887752 3
Q ss_pred CcEEEEeeCCCCcccC-CC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccC
Q 017569 203 TICVAAILGSTLTGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY 278 (369)
Q Consensus 203 ~~~v~~~~~~~~tG~~-~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~ 278 (369)
..+|++.-.....|.. -| +++|.++|+++ ++++++|++|.++.. ..........-...|.++ ..|.
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~g~~~~~~~~~~~pDiv~--~sK~ 268 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH------GILLIADEVQTGFAR--TGKLFAMEYYDVKPDLIT--MAKS 268 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCcc--CCchhhhhhcCCCCCEEe--eehh
Confidence 4566666666666643 23 99999999999 999999999986432 111001110011356555 5788
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 279 l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+++.+..|+++.++. .. +.+.. . .. ..|..+ +.....+..++|+.+..+.+.+ +..++.++|++.|++
T Consensus 269 l~~G~pigav~~~~~-i~-~~~~~-~---~~---~~T~~~--~p~~~aaa~a~L~~~~~~~l~~-~~~~~g~~l~~~L~~ 336 (421)
T PRK06777 269 LGGGMPISAVVGRAE-VM-DAPAP-G---GL---GGTYAG--NPLAVAAALAVLDVIAEEKLCQ-RALILGAHLVEVLEK 336 (421)
T ss_pred hcCCCceEEEEEcHH-HH-hccCC-C---CC---CCCCCc--CHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHH
Confidence 777788899987532 22 22111 0 00 111111 1112333334555444433222 777888888888887
Q ss_pred c
Q 017569 359 S 359 (369)
Q Consensus 359 ~ 359 (369)
+
T Consensus 337 l 337 (421)
T PRK06777 337 A 337 (421)
T ss_pred H
Confidence 5
No 352
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.70 E-value=4.2e-06 Score=83.37 Aligned_cols=266 Identities=12% Similarity=-0.030 Sum_probs=143.5
Q ss_pred CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
+..+|.+.+++.+.++.-.+... .....+.+.++.+.|.+++.... ....++++|+||+..|++.++..+..+
T Consensus 71 Gh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseAve~AlklAr~~~~~~- 143 (460)
T PRK06916 71 GHQVPELDEAIREQLNKIAHSTL-LGLANVPSILLAEKLIEVVPEGL-----KKVFYSDSGATAVEIAIKMAFQYWQNK- 143 (460)
T ss_pred CCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc-
Confidence 34568888888888865322111 11123344566677888764321 248999999999999999998753211
Q ss_pred HhcCCCCCCCeEEecC-CCcchHHHHHhhhcc------------eeEEEeccC-Cc----------cccCHHHHHHHHhh
Q 017569 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEE-GY----------YVMNPVKAVELVDE 201 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~-~~----------~~~d~~~L~~~i~~ 201 (369)
|.. .+.+|+.-. ..|-....++.+.|- .+..+|... .. ..-+++++++.++.
T Consensus 144 ---g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 219 (460)
T PRK06916 144 ---GKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE 219 (460)
T ss_pred ---CCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence 211 134555544 445443333333221 133343221 00 01245677777763
Q ss_pred ---cCcEEEEee-CCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 202 ---NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 202 ---~~~~v~~~~-~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
+..+|++.- .....|.+. -++++.++|+++ ++++++|+++.|+-. ...-..+...-...|.++
T Consensus 220 ~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~TG~GR--tG~~~a~~~~gv~PDiv~- 290 (460)
T PRK06916 220 KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY------NVLFITDEVATGFGR--TGKMFACEHENVTPDIMT- 290 (460)
T ss_pred CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCc--CchhhHHHhcCCCCCeee-
Confidence 445666554 245556552 389999999999 999999999766422 010001111111467777
Q ss_pred cCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 274 ~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
..|.+.+.+ ..|.++.+++ .. +.+. ..+.... ....|..| .+. ...+..++|..+..+++.+ +..++.+
T Consensus 291 -~gK~l~gG~~Pi~av~~~~e-i~-~~~~--~~~~~~~~~~~~~T~~g-npl-~~aaa~a~l~~l~~~~l~~-~~~~~g~ 362 (460)
T PRK06916 291 -AGKGLTGGYLPIAITVTTDE-IY-NAFY--GDYEEQKTFFHGHSYTG-NPL-GCAVALANLELYEKTNLIE-QVARKTE 362 (460)
T ss_pred -eehhhhcCccccceeeecHH-HH-HHhh--ccccccCccccCCCCCC-CHH-HHHHHHHHHHHHHhccHHH-HHHHHHH
Confidence 468766663 6778877643 21 1211 1110000 00111112 112 2334446666665555433 8888899
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
+|++.|+++
T Consensus 363 ~l~~~l~~l 371 (460)
T PRK06916 363 YVATQLEDL 371 (460)
T ss_pred HHHHHHHHh
Confidence 999999875
No 353
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.70 E-value=6.4e-06 Score=82.00 Aligned_cols=250 Identities=10% Similarity=-0.035 Sum_probs=138.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+.. .....+.+.++.+.|+++++... ....++++|+||+..|++.++..
T Consensus 87 h~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~------ 153 (459)
T PRK06082 87 YGHPHVIEKVKEQMAKLPFSP--RRFTNETAIECAEKLTEIAGGEL-----NRVLFAPGGTSAIGMALKLARHI------ 153 (459)
T ss_pred CCCHHHHHHHHHHHHhCCCcc--CccCCHHHHHHHHHHHHhCCCCC-----CEEEECCCcHHHHHHHHHHHHHh------
Confidence 345788888888876533221 11223445566777888875321 24899999999999999998763
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHhhhcc------------eeEEEeccCCccc-----c------CHHHHHHHHhh-
Q 017569 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV-----M------NPVKAVELVDE- 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~-----~------d~~~L~~~i~~- 201 (369)
.| +.+|+. ....|-....++...|. ++..+|... .++ . +++.|++.++.
T Consensus 154 -tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 154 -TG----NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAV-SYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred -cC----CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCc-ccccccCChhHHHHHHHHHHHHHHhcC
Confidence 11 344544 44455444333333221 133343211 011 0 13567777753
Q ss_pred -cCcEEEEeeCCCCccc-CCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc
Q 017569 202 -NTICVAAILGSTLTGE-FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (369)
Q Consensus 202 -~~~~v~~~~~~~~tG~-~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h 276 (369)
+..+|++.-.... |. +-| +++|.++|+++ |+++++|+++.|+-.. ..-..+...-...|.++ ..
T Consensus 228 ~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tG~GRt--G~~fa~e~~gv~PDiv~--~g 296 (459)
T PRK06082 228 GGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKH------NVLLIIDEIPNGMGRT--GEWFTHQAYGIEPDILC--IG 296 (459)
T ss_pred CCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--chhhHhHhhCCCCCEEE--ec
Confidence 3455555444333 43 333 99999999999 9999999998764220 00000111111468777 57
Q ss_pred cCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHH
Q 017569 277 KYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFF 355 (369)
Q Consensus 277 K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~ 355 (369)
|.+++.+ ..|.++.++. .. ..+ ...+ .. .|..+.. ...++..++|+.+..+++.+ +..++.++|++.
T Consensus 297 Kgl~gG~~P~~av~~~~~-i~-~~~--~~~~-~~----~T~~gnp--l~~aaa~a~L~~l~~~~l~~-~~~~~g~~l~~~ 364 (459)
T PRK06082 297 KGLGGGLVPIAAMITKDK-YN-TAA--QISL-GH----YTHEKSP--LGCAAALATIEVIEQEGLLE-KVKADSQFMRER 364 (459)
T ss_pred ccccCCCCcceEEEEcHH-HH-hhc--cCCC-CC----CCCCcCH--HHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHH
Confidence 8887663 6777877643 21 111 1000 00 1211211 12344446666675555433 778888888888
Q ss_pred HHh
Q 017569 356 VIH 358 (369)
Q Consensus 356 L~~ 358 (369)
|++
T Consensus 365 L~~ 367 (459)
T PRK06082 365 LLE 367 (459)
T ss_pred HHH
Confidence 876
No 354
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.69 E-value=7.4e-06 Score=81.42 Aligned_cols=266 Identities=11% Similarity=-0.060 Sum_probs=142.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+.... ....+...++.+.+.++++.+. ....++++|+||+..|++.++..+.. |
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGseAve~AlKlA~~~~~~-r- 141 (453)
T PRK06943 70 HANPRINAALKDQLDTLEHAMLA-GCTHEPAIELAERLAALTGGTL-----GHAFFASDGASAVEIALKMSFHAWRN-R- 141 (453)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCCHHHHHHHHHHHHHHHHH-h-
Confidence 44688888888887653221111 1122334456667777765331 24899999999999999999875432 1
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccCCcc-----------ccCHHHHHHHHhh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYY-----------VMNPVKAVELVDE- 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~-----------~~d~~~L~~~i~~- 201 (369)
|.. .+.+|+.-.. .|-...-++...|- .+..+|.....+ .=+++++++.++.
T Consensus 142 --g~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 218 (453)
T PRK06943 142 --GRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER 218 (453)
T ss_pred --CCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 211 1345665444 34332222222221 133343321000 0135777777753
Q ss_pred --cCcEEEEee-CCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 202 --NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 202 --~~~~v~~~~-~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+..+|++.- .....|.+. -++++.++|+++ |+++|+|+++.|+-. ...-..++..-...|.+++
T Consensus 219 ~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~------gillI~DEV~TG~GR--tG~~fa~~~~gv~PDivt~- 289 (453)
T PRK06943 219 AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY------GVHLIADEIAVGCGR--TGTFFACEQAGVWPDFLCL- 289 (453)
T ss_pred CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCC--CcchhHHHhCCCCCCeEee-
Confidence 445666554 245556652 399999999999 999999999876422 1110011111114788884
Q ss_pred CccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHH
Q 017569 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSS 353 (369)
Q Consensus 275 ~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~ 353 (369)
.|.+.+.+ ..|.++.+++ .. +.+..... ........|..|. ....++.-++|..+..+++-+ +..++.++|+
T Consensus 290 -gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~-~~~~~~~~T~~gn--pl~~aaa~a~L~~i~~~~l~~-~~~~~G~~l~ 362 (453)
T PRK06943 290 -SKGISGGYLPLSLVLSRDA-IF-AAFYDDDV-TRGFLHSHSYTGN--PLACRAALATLDLFAEDDVLA-RNARKSARLR 362 (453)
T ss_pred -ehhhccCcccceEEEEcHH-HH-HhhcccCc-cCCccCCCCCCCC--HHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHH
Confidence 68776663 6788887643 21 22211000 0000001111111 112334445566666555433 7778888999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|+++
T Consensus 363 ~~L~~l 368 (453)
T PRK06943 363 AALAPL 368 (453)
T ss_pred HHHHHH
Confidence 988875
No 355
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.68 E-value=7.3e-06 Score=81.71 Aligned_cols=267 Identities=10% Similarity=-0.074 Sum_probs=143.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-.+... .....+...++.+.+.+++..+. ....++++|+||+..|++.++..+..+
T Consensus 63 h~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlKlAr~~~~~~-- 134 (466)
T PRK07030 63 HANPRINQRIKDQVDQLEHVIL-AGFSHEPVIELSERLVKITPPGL-----SRCFYADNGSSAIEVALKMSFHYWRNR-- 134 (466)
T ss_pred CCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHHh--
Confidence 4457788888888765322111 11223444566777887764221 248999999999999999998753221
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhcc------------eeEEEeccCC-c--c--------ccCHHHHHHHHhh-
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--Y--------VMNPVKAVELVDE- 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~--------~~d~~~L~~~i~~- 201 (369)
|. ..+.+|+.-. ..|-...-++...|. ++..+|.... . . .-+++.+++.+..
T Consensus 135 --g~-t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~ 211 (466)
T PRK07030 135 --GK-PRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH 211 (466)
T ss_pred --CC-CCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 11 1134555444 344433333322221 1233432210 0 0 1135667777753
Q ss_pred --cCcEEEEee-CCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 202 --NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 202 --~~~~v~~~~-~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+..+|++.- .....|.+. -+++|.++|+++ ++++|+|+++.|+-. ...-..+...-...|.+++
T Consensus 212 ~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~TGfGR--tG~~~a~~~~gv~PDiv~~- 282 (466)
T PRK07030 212 HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY------GVHLIHDEIAVGFGR--TGTMFACEQAGIRPDFLCL- 282 (466)
T ss_pred CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--cccchHHHhcCCCCCEEee-
Confidence 345555554 244446653 389999999999 999999999876432 1110011111114688884
Q ss_pred CccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHH
Q 017569 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSS 353 (369)
Q Consensus 275 ~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~ 353 (369)
.|.+.+.+ ..|.++.+++ .. +.+....+-.+......|..|. ....++..++|+.+.++++.+ +..++.++|+
T Consensus 283 -gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~~~~~~h~~T~~gn--pla~aaa~a~L~~i~~~~l~~-~~~~~G~~l~ 356 (466)
T PRK07030 283 -SKALTGGYLPLAAVLTTDT-VY-QAFYDDYPTLRAFLHSHSYTGN--PLACAAALATLDIFEQDNVIE-NNRALARRMA 356 (466)
T ss_pred -ehhccCCcccceEEEecHH-HH-HHHhcccccccccccCCCCCCC--HHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHH
Confidence 68777664 6777877643 21 1221100000000001111121 122344446677776665543 7888899999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|+++
T Consensus 357 ~~L~~l 362 (466)
T PRK07030 357 EATAHL 362 (466)
T ss_pred HHHHHH
Confidence 999875
No 356
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.68 E-value=4.6e-06 Score=82.30 Aligned_cols=263 Identities=10% Similarity=-0.054 Sum_probs=139.7
Q ss_pred CChHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.++.-... ...... .-..++.+++.++++.+. ....++++|+||+..|++.++..+..+
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~- 132 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFGGFTH--KPAIELCQKLVKMTPNAL-----DCVFLADSGSVAVEVALKMALQYWQAK- 132 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccCC--HHHHHHHHHHHhhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhh-
Confidence 44577888888877653211 111111 223356666777764332 248999999999999999988754321
Q ss_pred HhcCCCCCCCeEE-ecCCCcchHHHHHhhhcc-------------eeEEEeccCCcc-----ccCHHHHHHHHhh---cC
Q 017569 146 KEQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYY-----VMNPVKAVELVDE---NT 203 (369)
Q Consensus 146 ~~~g~~~~~~~Vi-~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~-----~~d~~~L~~~i~~---~~ 203 (369)
|.+. +.+|+ +....|-...-+....|- ++..+|.....+ .-|++++++.+.. +.
T Consensus 133 ---~~~~-r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~v 208 (427)
T TIGR00508 133 ---GEKN-RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEI 208 (427)
T ss_pred ---CCCC-ccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcE
Confidence 1111 23444 444455433323322221 112222211101 1156778888763 33
Q ss_pred cEEEEeeC-CCCccc----CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCcc
Q 017569 204 ICVAAILG-STLTGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHK 277 (369)
Q Consensus 204 ~~v~~~~~-~~~tG~----~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK 277 (369)
.+|++... +...|. ..++++|.++|+++ ++++++|+++.++.. ....... .+.+ ..|.++ ..|
T Consensus 209 aavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~------~~llI~DEv~tG~Gr--~G~~~~~~~~~v-~pDi~~--~gK 277 (427)
T TIGR00508 209 AAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY------DILLIADEIATGFGR--TGKLFACEHAGV-VPDILC--VGK 277 (427)
T ss_pred EEEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCccchhhhcCC-CCCEEE--ech
Confidence 45554432 444343 36799999999999 999999999855322 1100011 1112 467776 478
Q ss_pred CCCCCC-CeEEEEEeCCCCcccccccc--cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHH
Q 017569 278 YGLVYA-GVGWVVWRTKDDLPDELVFH--INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSF 354 (369)
Q Consensus 278 ~l~~p~-g~g~l~~~~~~~~~~~~~~~--~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~ 354 (369)
.+.+.. .++.++.++. .. +.+... ..+... .++ .+ +.....+..++|+.+..+.+.+ +..++.++|++
T Consensus 278 ~l~gG~~p~~a~~~~~~-~~-~~~~~~~~~~~~~~--~T~--~g--~p~~~aaa~a~l~~l~~~~~~~-~~~~~~~~l~~ 348 (427)
T TIGR00508 278 ALTGGYMTLSATVTTDK-VA-QTISSGEAGCFMHG--PTF--MG--NPLACAVAEASLAILLEGEWQK-QVSAIENQLKR 348 (427)
T ss_pred hhhcCcccceEEEEcHH-HH-HHHhcCCCCccccC--CCC--Cc--CHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHH
Confidence 876553 4566666432 21 122110 011100 111 12 1223455556677665544422 88889999999
Q ss_pred HHHhcCC
Q 017569 355 FVIHSSY 361 (369)
Q Consensus 355 ~L~~~g~ 361 (369)
.|++++.
T Consensus 349 ~L~~l~~ 355 (427)
T TIGR00508 349 ELSPLRK 355 (427)
T ss_pred HHHHhhc
Confidence 9988753
No 357
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.67 E-value=1.2e-06 Score=81.33 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=140.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH
Q 017569 88 DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (369)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~ 167 (369)
..+.+...|..+ +.+.||++. .+-|..|..|-..-+-.++.+ |....+.+.+++++.|+-.
T Consensus 76 agsrs~~~L~~a----vkdifGfq~-------~iPthQGRgAE~Il~~i~ik~--------~~~~pg~~~~~~sN~~FdT 136 (471)
T COG3033 76 AGSRSYYALADA----VKDIFGFQY-------TIPTHQGRGAENILIPILIKK--------GEQEPGSKMVAFSNYHFDT 136 (471)
T ss_pred cccccHHHHHHH----HHHhcCcee-------eeeccCCccHHHHHHHHHhhh--------ccccCCccccccccceecc
Confidence 344555566655 677889876 566666655443333333321 1111223555566666653
Q ss_pred -HHHHhhhcceeEEEeccCC---------ccccCHHHHHHHHhh----cCcEEEEeeCCCCc-ccC---CCHHHHHHHHH
Q 017569 168 -EKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDE----NTICVAAILGSTLT-GEF---EDVKLLHDLLT 229 (369)
Q Consensus 168 -~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~----~~~~v~~~~~~~~t-G~~---~~l~~I~~l~~ 229 (369)
..-....|+.++-+++++. .+.+|++.|++.|++ +..+|+++.-+|.. |.. .+++++.++|+
T Consensus 137 Tr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ 216 (471)
T COG3033 137 TRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAK 216 (471)
T ss_pred hhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHH
Confidence 3344566877777777531 368999999999987 34566655544444 433 78999999999
Q ss_pred HhhhccCCCceEEeeccc-ccccccccC---CCcc-cc---c--c-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc-
Q 017569 230 KKNEETGWDTPIHVDAAS-GGFIAPFLY---PDLE-WD---F--R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP- 297 (369)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~-~~~~~~~~~---~~~~-~~---~--~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~- 297 (369)
++ ++.++.|+|- ..-.. |+. +.++ .. + . ...+|.++.|+.|=++++.| |+++++|+..+.
T Consensus 217 ky------~ipvv~Da~RfaENaY-FIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDv 288 (471)
T COG3033 217 KY------DIPVVMDAARFAENAY-FIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDV 288 (471)
T ss_pred Hc------CCcEEeehhhhhhhhh-hhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHH
Confidence 99 9999999872 11111 122 1111 11 1 1 45799999999999999988 899999875321
Q ss_pred --cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 298 --DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 298 --~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.+-..-.-+.+ ..++ |+-.++..-++...|..-- .+.-+ +..+.-+||.+.|.+.|.
T Consensus 289 y~~~~~~~V~~eG--~~tY---Ggl~GrdmealAvGL~e~~--~~~yl~~Rv~Qv~YL~~~l~~~GV 348 (471)
T COG3033 289 YEECRTLVVVQEG--FPTY---GGLAGRDMEALAVGLREGV--NFDYLAHRVAQVQYLADGLEEAGV 348 (471)
T ss_pred HHHHHhheEeecc--cccc---CcccchhHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHHhcCC
Confidence 11000011111 1222 3344443334433333211 12222 667777899999998875
No 358
>PRK07036 hypothetical protein; Provisional
Probab=98.66 E-value=1.1e-05 Score=80.42 Aligned_cols=263 Identities=14% Similarity=-0.025 Sum_probs=140.6
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-.+.........+.+.++.+.+.+++..+. ....++++|+||+..|++.++..+.. +
T Consensus 67 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~-~- 139 (466)
T PRK07036 67 YGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL-----NHVFLTTGGSTAVDSALRFVHYYFNV-R- 139 (466)
T ss_pred CCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHHh-c-
Confidence 4468888888877765322111111233445566677777753321 24899999999999999998764321 1
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhhcc------------eeEEEeccCC---cccc--------CHHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG---YYVM--------NPVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~~--------d~~~L~~~i~-- 200 (369)
|.. .+.+|+.-. ..|-...-+....|- .+..+|.... ...+ .++.+++.+.
T Consensus 140 --g~t-~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (466)
T PRK07036 140 --GRP-AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL 216 (466)
T ss_pred --CCC-CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc
Confidence 211 134565543 344333222222111 1333433210 0011 1344566564
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCCcEEE
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSIN 272 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Dsi~ 272 (369)
++..+|++.-.....|.+.| +++|.++|+++ ++++|+|+++.|+-. . ++.-+. .+.+ ..|.++
T Consensus 217 ~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~~~~~--~~gv-~PDivt 287 (466)
T PRK07036 217 GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY------DILYISDEVVTGFGRLGHFFASEA--VFGI-QPDIIT 287 (466)
T ss_pred CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCcCchhhhhhh--hcCC-CCCEEE
Confidence 23566777666666677655 99999999999 999999999866422 1 111110 1122 367777
Q ss_pred EcCccCCCCCC-CeEEEEEeCCCCcccccccc--cC--ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhH
Q 017569 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFH--IN--YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVD 347 (369)
Q Consensus 273 ~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~--~~--y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~ 347 (369)
..|.+.+.+ ..|.++++++ .. +.+... .. |.. ..|..|.. . ..++.-++|+.+..+++.+ +..+
T Consensus 288 --~gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~----~~T~~gnp-l-~~aaa~a~Le~i~~~~l~~-~~~~ 356 (466)
T PRK07036 288 --FAKGLTSGYQPLGAVIISER-LL-DVISGPNAKGNVFTH----GFTYSGHP-V-ACAAALKNIEIMEREGLCE-HVRE 356 (466)
T ss_pred --EccccccCccccEEEEEcHH-HH-HHHhcccCcCccccc----CCCCCCCH-H-HHHHHHHHHHHHHhCCHHH-HHHH
Confidence 468776653 5777877642 22 222110 00 111 01111211 1 2333445566665544333 7888
Q ss_pred HHHHHHHHHHhc
Q 017569 348 HKKLSSFFVIHS 359 (369)
Q Consensus 348 ~a~~l~~~L~~~ 359 (369)
+.++|++.|+++
T Consensus 357 ~g~~l~~~L~~l 368 (466)
T PRK07036 357 VGPYFEERLASL 368 (466)
T ss_pred HHHHHHHHHHHh
Confidence 889999988764
No 359
>PRK07678 aminotransferase; Validated
Probab=98.66 E-value=8.9e-06 Score=80.83 Aligned_cols=260 Identities=11% Similarity=-0.044 Sum_probs=140.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-......+ ..+.+.++.+.|.++++.. ....++++|+||+..|++.+|..+..
T Consensus 63 h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~lae~l~~~~~~~------~~v~f~~sGseA~e~AlklAr~~t~~--- 131 (451)
T PRK07678 63 YGRKELAEAAYEQLKTLSYFPLTQ--SHEPAIKLAEKLNEWLGGE------YVIFFSNSGSEANETAFKIARQYHAQ--- 131 (451)
T ss_pred CCCHHHHHHHHHHHHhcCcccccc--CCHHHHHHHHHHHHhCCCC------CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 446778888887776532221111 2233445667777776543 24789999999999999999875421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCCcccc---------C---HHHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYVM---------N---PVKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~---------d---~~~L~~~i~- 200 (369)
.|.+ .+.+|+.-.. .|-....++...| -++..+|... .++. | ++.+++.++
T Consensus 132 -~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 132 -KGEP-HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPD-CYRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred -cCCC-CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCc-cccccccCChHHHHHHHHHHHHHHHHh
Confidence 1211 1345655443 3433332332211 1233344321 1111 1 233566664
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCCcEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Dsi 271 (369)
++..+|++.-.....|.+.| ++++.++|+++ |+++|+|+++.|+-. . ++.-+ .+. + ..|.+
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~~~~-~~g--v-~PDiv 278 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH------GALLISDEVICGFGRTGKAFGFM-NYG--V-KPDII 278 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhcCCcCchhHHHH-hcC--C-CCCEE
Confidence 34566666655555566644 99999999999 999999999865422 1 11111 122 2 47888
Q ss_pred EEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 272 NVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 272 ~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
++ .|.+++. ...|.++++++ .. +.+.....+ +...-..|..+. ....++..++|+.+..+++.+ +..++.+
T Consensus 279 t~--gK~lggG~~Pi~av~~~~~-i~-~~~~~~~~~-~~~~h~~T~~gn--p~~~aaa~a~l~~l~~~~~~~-~~~~~g~ 350 (451)
T PRK07678 279 TM--AKGITSAYLPLSATAVKKE-IY-EAFKGKGEY-EHFRHVNTFGGN--PAACALALKNLEIMENENLIE-RSAQLGE 350 (451)
T ss_pred Ee--ecccccCCcceeEEEEcHH-HH-HHHhccCcc-cccccCCCCCcC--HHHHHHHHHHHHHHHhCCHHH-HHHHHHH
Confidence 74 6877666 36788887643 21 222111100 000001111111 122344456666676655433 7777888
Q ss_pred HHHHHHHh
Q 017569 351 LSSFFVIH 358 (369)
Q Consensus 351 ~l~~~L~~ 358 (369)
+|++.|++
T Consensus 351 ~l~~~l~~ 358 (451)
T PRK07678 351 LLLEQLKE 358 (451)
T ss_pred HHHHHHHH
Confidence 88887764
No 360
>PRK07046 aminotransferase; Validated
Probab=98.65 E-value=5.6e-06 Score=82.24 Aligned_cols=246 Identities=9% Similarity=-0.078 Sum_probs=136.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++..... . ...+.+.++.+.+.++++.+ ...++++||||+..|++.+|...
T Consensus 91 h~~p~i~~Av~~q~~~~~~~--~--~~~~~~~~lAe~l~~~~~~~-------~v~F~nSGtEA~e~AlrlAR~~T----- 154 (453)
T PRK07046 91 HSPAPVARALAEQARRGLTT--M--LPSEDAAWVGEELARRFGLP-------YWQVATTATDANRFVLRWARAVT----- 154 (453)
T ss_pred CCCHHHHHHHHHHHHhCCCC--C--CCCHHHHHHHHHHHHHhCCC-------EEEEECCHHHHHHHHHHHHHHhh-----
Confidence 34578888888888654321 1 23455667778888887644 38999999999999999998741
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHH-h-----------hhcce------eEEEeccCCccccCHHHHHHHHhh-cCcEE
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFA-R-----------YFEVE------LKEVKLEEGYYVMNPVKAVELVDE-NTICV 206 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~-~-----------~~G~~------v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v 206 (369)
| +.+|+.-. ..|-...... . ..|.. +..+| + -|++++++.+.. +..+|
T Consensus 155 --G----r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~-nd~~~l~~~l~~~~vAav 222 (453)
T PRK07046 155 --G----RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE-----F-NDLAALEAALADGDVAAV 222 (453)
T ss_pred --C----CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC-----C-CCHHHHHHHhCCCCeEEE
Confidence 2 45566533 3343211111 1 00110 11111 1 178999998853 45566
Q ss_pred EEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC
Q 017569 207 AAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (369)
Q Consensus 207 ~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p 282 (369)
++.-.....|.+.| ++++.++|+++ |+++|+|+++... ..+-.- ...+.+ ..|.++ ..|.+++.
T Consensus 223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~------g~llI~DEV~tfr-~g~Gg~--~~~~gv-~PDi~t--~gK~lggG 290 (453)
T PRK07046 223 LAEPAMTNIGMVLPEPGFHEALRELTRRY------GTLLVIDETHTIS-SGPGGY--TRAHGL-EPDFLV--VGKPIAGG 290 (453)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEccccCc-cCCcch--hHHhCC-Ccccee--ehhhhcCC
Confidence 66554444465533 89999999999 9999999997410 000000 111122 357777 57888777
Q ss_pred CCeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcch--hHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 283 AGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGS--SQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~--~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
..+|.++.++. .. ..+... .....+ .....+|=.+ ...++..++|+.+..+++.+ +..++.++|++.|++
T Consensus 291 ~Pi~av~g~~~-i~-~~~~~~~~~~~~~---~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~-~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 291 VPCAVYGFSAE-LA-ERAQAAKASAPPG---HSGIGTTLSANALAMAAMRATLAEVMTEAAYA-HMLALAARLAAGLRA 363 (453)
T ss_pred CcceeeeehHH-HH-HHHhhccccCCCC---CceeCCCCcccHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHH
Confidence 88888887643 22 222100 000000 0001112112 12334445556564444322 666777788777764
No 361
>PRK07480 putative aminotransferase; Validated
Probab=98.65 E-value=9.9e-06 Score=80.57 Aligned_cols=265 Identities=12% Similarity=-0.071 Sum_probs=140.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+....+......+.++.+.|.+++..+. ....++++|+||+..|++.+|..+..
T Consensus 66 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 137 (456)
T PRK07480 66 YGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF-----NHVFFTNSGSEANDTVLRMVRHYWAL--- 137 (456)
T ss_pred CCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 4457788888888765332211111223444556677887764322 24789999999999999999875321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccCC----------cc-ccCHHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEG----------YY-VMNPVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~----------~~-~~d~~~L~~~i~-- 200 (369)
.|.. .+.+|+.-.. .|-....+....|. .+..++.... .+ ...++.|++.+.
T Consensus 138 -~g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (456)
T PRK07480 138 -KGKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL 215 (456)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 1211 1345665443 34332222222111 1222221100 00 001366666553
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
++..+|++.-.....|.+.+ +++|.++|+++ |+++|+|+++.|+-. ...-..+...-...|.++
T Consensus 216 ~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv~PDiv~-- 285 (456)
T PRK07480 216 GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY------DILLVADEVICGFGR--TGEWFGSQHFGIKPDLMT-- 285 (456)
T ss_pred CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhhhhhcCCCCCeee--
Confidence 24556666655555566654 99999999999 999999999866422 010000111111367776
Q ss_pred CccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHh-hHHHHHH
Q 017569 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCC-VDHKKLS 352 (369)
Q Consensus 275 ~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~-~~~a~~l 352 (369)
..|.+.+.+ ..|.++.+++ .. +.+......... ..|..|. ....++..++|+.+..+++.+ +. .++.++|
T Consensus 286 ~gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~---~~T~~gn--pl~~Aaa~a~L~~l~~~~l~~-~~~~~~g~~l 357 (456)
T PRK07480 286 IAKGLTSGYIPMGAVGVGDR-VA-EVLIEEGGEFNH---GFTYSGH--PVAAAVALANLRILRDEGIVE-RVRDDTGPYL 357 (456)
T ss_pred eehhhccCCccceEEEEcHH-HH-HHHhcCCCCccc---CCCCCcC--HHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHH
Confidence 468776653 5677777542 22 222111110001 1121122 222444556666666555433 66 4788899
Q ss_pred HHHHHhc
Q 017569 353 SFFVIHS 359 (369)
Q Consensus 353 ~~~L~~~ 359 (369)
++.|+++
T Consensus 358 ~~~l~~l 364 (456)
T PRK07480 358 QKRLREL 364 (456)
T ss_pred HHHHHHh
Confidence 9988863
No 362
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.64 E-value=8.1e-06 Score=81.19 Aligned_cols=250 Identities=14% Similarity=-0.008 Sum_probs=139.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-......+ .......++.+.+.++++.+. ....++++|+||+..|++.+|..
T Consensus 69 h~~p~i~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------ 136 (457)
T PRK05639 69 YSHPKLVKAVQEQVALIQHSMIGY-THSERAIRVAEKLAEISPIEN-----PKVLFGLSGSDAVDMAIKVSKFS------ 136 (457)
T ss_pred CCCHHHHHHHHHHHHhccccccCc-cCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh------
Confidence 446788888888876532111111 112333456666777765332 24899999999999999998764
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc--------c-----eeEEEeccCCccc--------cCH--------HHHH
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V-----ELKEVKLEEGYYV--------MNP--------VKAV 196 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G--------~-----~v~~v~~~~~~~~--------~d~--------~~L~ 196 (369)
.| +.+|+.-.. .|-....+....| . ++..+|.... ++ -|. +.|+
T Consensus 137 -tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~le 210 (457)
T PRK05639 137 -TR----RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGINGYEEPDELINRFLDYLE 210 (457)
T ss_pred -cC----CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccccccCCHHHHHHHHHHHHH
Confidence 11 456665444 4433332222222 1 1445554311 11 022 3455
Q ss_pred HHHh------hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccC
Q 017569 197 ELVD------ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRL 265 (369)
Q Consensus 197 ~~i~------~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~ 265 (369)
+.+. ++..+|++.-.....|.+.| +++|.++|+++ ++++++|+++.|+-.. ..-.... +.+
T Consensus 211 ~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~Grt--G~~~a~~~~gv 282 (457)
T PRK05639 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH------GILLVMDEVQTGIGRT--GKWFASEWFEV 282 (457)
T ss_pred HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccCcC--chHHHHHhcCC
Confidence 5442 34566666655555565533 89999999999 9999999998764221 0000011 112
Q ss_pred CCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHh
Q 017569 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCC 345 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~ 345 (369)
..|.++ ..|.+.+..+.|.++.+++ ... . . .-.+. .|..+. +. ..++.-++|+.+..+++.+ +.
T Consensus 283 -~PDiv~--~gK~l~gG~pi~av~~~~~-i~~-~-~-~~~~~------~T~~g~-p~-~~aaa~a~l~~l~~~~l~~-~~ 346 (457)
T PRK05639 283 -KPDLII--FGKGVASGMGLSGVIGRKE-LMD-L-T-SGSAL------LTPAAN-PV-ISAAAEATLEIIEEENLLK-NA 346 (457)
T ss_pred -CCCEEE--echhhcCCCcceeEEehHH-HHh-h-c-CCCcc------cCCCcC-HH-HHHHHHHHHHHHHHccHHH-HH
Confidence 478888 5788876677788887643 221 1 0 00111 111121 12 2344446677776655533 66
Q ss_pred hHHHHHHHHHHHh
Q 017569 346 VDHKKLSSFFVIH 358 (369)
Q Consensus 346 ~~~a~~l~~~L~~ 358 (369)
.++.++|++.|++
T Consensus 347 ~~~g~~l~~~L~~ 359 (457)
T PRK05639 347 LKVGEFIKKRLLE 359 (457)
T ss_pred HHHHHHHHHHHHH
Confidence 6688999998876
No 363
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.64 E-value=5.2e-06 Score=81.87 Aligned_cols=262 Identities=11% Similarity=-0.059 Sum_probs=141.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-.+... .....+...++.+.|.++++.+. ....++++|+||+..|++.++..+..+
T Consensus 59 h~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~~~~~-- 130 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMSHVMF-GGITHPPAIELCRKLVAMTPQPL-----ECVFLADSGSVAVEVAMKMALQYWQAK-- 130 (428)
T ss_pred CCCHHHHHHHHHHHhhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 4458888888888865332211 11123344566677887764322 248999999999999999988753211
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc-------------eeEEEeccCCc----c-ccCHHHHHHHHhh---cCc
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGY----Y-VMNPVKAVELVDE---NTI 204 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~-~~d~~~L~~~i~~---~~~ 204 (369)
| ..+.+|+.-.. .|-...-++...|- ++..+|..... + .-|++++++.++. +..
T Consensus 131 --g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~ia 206 (428)
T PRK07986 131 --G--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIA 206 (428)
T ss_pred --C--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEE
Confidence 1 11345655444 44332222222121 12333322110 1 1256788888863 344
Q ss_pred EEEEeeC-CCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccC
Q 017569 205 CVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKY 278 (369)
Q Consensus 205 ~v~~~~~-~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~ 278 (369)
+|++... +...|.+ ..+++|.++|+++ ++++++|+++.|+-. ...-.... +.+ ..|.++ ..|.
T Consensus 207 avi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~------g~lLI~DEv~tG~Gr--tG~~fa~~~~gv-~PDi~t--~gK~ 275 (428)
T PRK07986 207 AVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE------GILLIADEIATGFGR--TGKLFACEHAGI-APDILC--LGKA 275 (428)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CCCeeeecccCC-CCCEEE--echh
Confidence 5555432 4444543 3499999999999 999999999865322 00000111 112 357776 5787
Q ss_pred CCCC-CCeEEEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHH
Q 017569 279 GLVY-AGVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFV 356 (369)
Q Consensus 279 l~~p-~g~g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L 356 (369)
+++. ...|.++.+++ .. +.+.... ...... .++ .+ +....++..++|+.+..+++.+ +..++.++|++.|
T Consensus 276 l~gG~~p~~av~~~~~-i~-~~~~~~~~~~~~~~-~T~--~g--~p~~~aaa~a~L~~i~~~~~~~-~~~~~g~~l~~~l 347 (428)
T PRK07986 276 LTGGTMTLSATLTTRE-VA-ETISNGEAGCFMHG-PTF--MG--NPLACAVANASLSLLESGDWQQ-QVAAIEAQLREEL 347 (428)
T ss_pred hhCCcccCcchhchHH-HH-HHhhcCCCCccccC-CCC--Cc--CHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHH
Confidence 7655 35566666532 21 2221110 000000 111 12 2223455557777776665522 8888899999999
Q ss_pred Hhc
Q 017569 357 IHS 359 (369)
Q Consensus 357 ~~~ 359 (369)
+++
T Consensus 348 ~~l 350 (428)
T PRK07986 348 APL 350 (428)
T ss_pred HHH
Confidence 875
No 364
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.64 E-value=8.3e-06 Score=81.27 Aligned_cols=253 Identities=12% Similarity=0.034 Sum_probs=137.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe-CCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.+++....... ....+.+.++.+.+.+++..+.. ......++ ++|+||+..|++.+|..
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~~--~~~~v~f~~~SGSEAve~AlklAr~~----- 150 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPEAFA--REAKIQFCGPTGTDAVEAALKLVKTA----- 150 (464)
T ss_pred CCCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCccccc--ccceEEEeCCCcHHHHHHHHHHHHHh-----
Confidence 44678888888887643211111 11123333445556665432210 00124454 69999999999998764
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCCccc------------cCHHHHHHHHh
Q 017569 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYV------------MNPVKAVELVD 200 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~------------~d~~~L~~~i~ 200 (369)
.| +.+|+.-.. .|-...-++...| -++..+|.... ++ .+++.+++.+.
T Consensus 151 --tg----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~i~ 223 (464)
T PRK06938 151 --TG----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYD-YRCPFGLGGEAGVRANLHYLENLLD 223 (464)
T ss_pred --hC----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcc-ccccccCchhhHHHHHHHHHHHHHH
Confidence 12 345655443 4433322222211 12345554211 11 23677888886
Q ss_pred h------cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c-ccCCCccccccCCCC
Q 017569 201 E------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLV 268 (369)
Q Consensus 201 ~------~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~ 268 (369)
+ +..+|++.-.....|.+-| ++++.++|+++ |+++|+|+++.|+-. . ++.-+ .++ + ..
T Consensus 224 ~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~------giLlI~DEV~tGfGRtG~~~a~e-~~g--v-~P 293 (464)
T PRK06938 224 DPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA------GIPLIVDEIQSGFGRTGKMFAFE-HAG--I-IP 293 (464)
T ss_pred hhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcCcHHHHHH-hcC--C-CC
Confidence 3 3456666554444455532 89999999999 999999999876532 0 11100 112 2 46
Q ss_pred cEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHH
Q 017569 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDH 348 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~ 348 (369)
|.+++ .|.+++....|.++.++. + ..+ .....+ .++ .|. ....++..++|+.+..+++.+ +..++
T Consensus 294 Div~~--gKglggG~PlsAv~~~~~--~-~~~--~~~~~~---~T~--~gn--pla~Aaa~a~L~~l~~~~l~~-~~~~~ 358 (464)
T PRK06938 294 DVVVL--SKAIGGSLPLAVVVYREW--L-DTW--QPGAHA---GTF--RGN--QMAMAAGSATLRYIKEHRLAE-HAAAM 358 (464)
T ss_pred CEEEe--eccccCCCceEEEeehhH--h-hcc--CCCCCC---CCC--CcC--HHHHHHHHHHHHHHHHhHHHH-HHHHH
Confidence 88884 688777777888888653 2 222 111111 111 111 122344446666666655543 67777
Q ss_pred HHHHHHHHHhc
Q 017569 349 KKLSSFFVIHS 359 (369)
Q Consensus 349 a~~l~~~L~~~ 359 (369)
.++|++.|+++
T Consensus 359 G~~l~~~L~~l 369 (464)
T PRK06938 359 GERLREHLRQL 369 (464)
T ss_pred HHHHHHHHHHH
Confidence 88888888763
No 365
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.61 E-value=1.8e-05 Score=78.69 Aligned_cols=200 Identities=10% Similarity=-0.078 Sum_probs=110.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+.. ......+.+.++.+.|.+++..... ....++++|+||+..|++.+|...
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~~----~~v~f~~sGseA~e~AlklAr~~t----- 139 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTG-FNVMMYEPYIELAEKLAALAPGSFD----KKVLFLNSGAEAVENAVKIARKYT----- 139 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcc-ccccccHHHHHHHHHHHHhCCCCCC----CEEEEcCCcHHHHHHHHHHHHHHh-----
Confidence 446788888888776532211 1111234455667778887753210 148999999999999999997641
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc-------------eeEEEeccC-Cc--cccC--------HHHHHHHHh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEE-GY--YVMN--------PVKAVELVD- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~-~~--~~~d--------~~~L~~~i~- 200 (369)
| +.+|+.-.. .|-....++...|- ++..+|... .. ..+. ++.+++.+.
T Consensus 140 --g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 140 --K----RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred --C----CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 1 345655443 44333333322221 133333211 00 0010 223444332
Q ss_pred ----hcCcEEEEeeCCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEE
Q 017569 201 ----ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (369)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~ 272 (369)
++..+|++.-.....|.+. -+++|.++|+++ +++++.|++|.++.. ......+.......|.++
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~------gillI~DEV~tg~gr--~g~~~a~~~~~v~pDi~t 285 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH------GILFVADEIQTGFAR--TGKYFAIEHFDVVPDLIT 285 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--cCceehhHhcCCCCCEEe
Confidence 2344455443333335432 289999999999 999999999987543 111001111011356554
Q ss_pred EcCccCCCCCCCeEEEEEeC
Q 017569 273 VSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 273 ~~~hK~l~~p~g~g~l~~~~ 292 (369)
..|.+.+.+..|+++.++
T Consensus 286 --~sK~l~~G~pig~v~~~~ 303 (451)
T PRK06918 286 --VSKSLGAGVPISGVIGRK 303 (451)
T ss_pred --eehhhcCCCccEEEEEcH
Confidence 678887778899998753
No 366
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.61 E-value=9.2e-06 Score=80.21 Aligned_cols=250 Identities=10% Similarity=-0.107 Sum_probs=134.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++..... .. ..+.+.++.+.+.++++... ....++++|+||+..|++.+|...
T Consensus 69 h~~p~v~~ai~~q~~~~~~~--~~--~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGsEA~e~AiklAr~~t----- 134 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTSY--GL--TSEQEILFAEELFSYLGLED-----HKIRFVSSGTEATMTAVRLARGIT----- 134 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCC--CC--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHhh-----
Confidence 44688888888887653211 11 22334456667777775431 248999999999999999988641
Q ss_pred hcCCCCCCCeEEecCC-CcchH---HHHHhhhcce---e-EEE---eccCCcc---ccCHHHHHHHHhh---cCcEEEEe
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCW---EKFARYFEVE---L-KEV---KLEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~---~~~~~~~G~~---v-~~v---~~~~~~~---~~d~~~L~~~i~~---~~~~v~~~ 209 (369)
| +.+|+.-.. .|-.. ..+...-+-. . ... +...... .-|+++|++.+.+ +..+|++.
T Consensus 135 --g----r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 135 --G----RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred --C----CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 2 345554333 33321 1111111100 0 000 0000000 0167889988863 34566666
Q ss_pred eCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccCCCCCCC
Q 017569 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAG 284 (369)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~~p~g 284 (369)
......|.+.| +++|.++|+++ |+++++|+++.|+ . ........ +.+ ..|.++ ..|.+++...
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~-R--~G~~ga~~~~gv-~PDi~~--~gK~lggG~p 276 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRT------GSLSIMDEVVTGF-R--VAQGGAAAIYHV-KPDITV--YGKILGGGLP 276 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcccccc-c--ccHhHHHHhcCC-CCCeEE--EcccccCCcc
Confidence 65556677655 56999999999 9999999998653 1 11100011 112 357666 5788765555
Q ss_pred eEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 285 VGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
.|+++.+++ .. +.+... ..+..+ |..+ +-...++..++|+.+..+.+.+ +..++.++|++.|++
T Consensus 277 ~~av~~~~~-i~-~~~~~~~~~~~~~-----T~~g--~p~~~aa~la~L~~i~~~~~~~-~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 277 AAAVVAHKS-IM-DHLAPEGTIFQAG-----TLSG--NPLAMAAGKASINLCREQGFYT-QLSTLEQNFLSPIEE 341 (433)
T ss_pred eeeeeecHH-HH-hhhcCCCCcccCC-----CCcc--cHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHH
Confidence 677777543 22 222110 001111 1111 1122455556777776555422 666677777666654
No 367
>PRK06917 hypothetical protein; Provisional
Probab=98.60 E-value=1.6e-05 Score=78.96 Aligned_cols=262 Identities=10% Similarity=-0.039 Sum_probs=140.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++...+... +....+.+.++.+.|.+++.... ....++++|+||+..|++.++..+.. |
T Consensus 47 h~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-r- 118 (447)
T PRK06917 47 HGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSPGDL-----NWSFFVNSGSEANETAMKIAIQHFQE-R- 118 (447)
T ss_pred CCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCChHHHHHHHHHHHHHHHHh-c-
Confidence 4468888888888876422211 11223445567777888764321 24789999999999999999875422 1
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHhhhcc------------eeEEEeccCCccc------------cCHHHHHHHHhh
Q 017569 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLEEGYYV------------MNPVKAVELVDE 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G~------------~v~~v~~~~~~~~------------~d~~~L~~~i~~ 201 (369)
|. ..+.+|+.-..+ |-...-++...|. .+..+|... ..+ -+++.+++.++.
T Consensus 119 --g~-t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~le~~i~~ 194 (447)
T PRK06917 119 --GI-QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPY-CYRCPVQKVYPTCQLACATELETAIER 194 (447)
T ss_pred --CC-CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCc-ccccccCCChHHHHHHHHHHHHHHHHh
Confidence 11 123566654443 4332222222221 122233111 011 134677777763
Q ss_pred ----cCcEEEEeeCCCCcc-cC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEE
Q 017569 202 ----NTICVAAILGSTLTG-EF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (369)
Q Consensus 202 ----~~~~v~~~~~~~~tG-~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi 271 (369)
+..+|++.-.....| .+ +-+++|.++|+++ ++++++|+++.|+-. ......+ .+.+ ..|.+
T Consensus 195 ~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~------g~llI~DEv~tGfGR--tG~~~a~~~~gv-~PDi~ 265 (447)
T PRK06917 195 IGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY------DILFIADEVMTGLGR--TGAMFAMEHWGV-EPDIM 265 (447)
T ss_pred cCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc------CCEEEEechhhCcCc--ccchhhHHhcCC-CCCEE
Confidence 345565554333233 43 2389999999999 999999999876422 1110001 1112 35776
Q ss_pred EEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 272 NVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 272 ~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
+ ..|.+.+.+ ..|.++.+++ .. ..+......... ..|..+. ....++..++|+.+..+++.+ +..++.+
T Consensus 266 ~--~gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~~~~~---~~T~~gn--pl~~aaa~a~l~~l~~~~l~~-~~~~~g~ 335 (447)
T PRK06917 266 T--LGKGLGAGYTPIAATVVSDR-VM-EPILRGSRSIMS---GHTLSAN--PLSAATALAVLEYMEKHNLPE-KAAEKGE 335 (447)
T ss_pred E--eeehhccCCcceEEEEEcHH-HH-HHHhccCccccc---ccCCCCC--HHHHHHHHHHHHHHHHCCHHH-HHHHHHH
Confidence 6 478877664 5677777542 22 222111111100 0011111 122444556666665555433 7777888
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
+|++.|+++
T Consensus 336 ~l~~~L~~l 344 (447)
T PRK06917 336 YLIKGLQKV 344 (447)
T ss_pred HHHHHHHHH
Confidence 888888763
No 368
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.60 E-value=5.1e-06 Score=82.12 Aligned_cols=252 Identities=8% Similarity=-0.055 Sum_probs=130.3
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.... +. . ....+.++.+.+.+++... ....++++|+||+..|++.+|..
T Consensus 64 h~~p~v~~Ai~~q~~~~~~-~~-~--~~~~~~~la~~l~~~~p~~------~~v~f~~sGseA~e~AlklAr~~------ 127 (431)
T PRK06209 64 HAYPPVVEAVREALQDGCN-FT-R--PSAIELDAAESFLELIDGA------DMVKFCKNGSDATSAAVRLARAY------ 127 (431)
T ss_pred CCCHHHHHHHHHHHHhCcC-CC-C--CCHHHHHHHHHHHHhCCcc------ceEEEecCHHHHHHHHHHHHHHH------
Confidence 4457888888888775432 11 2 2233445666777776321 13789999999999999998764
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHH---Hhh--hcce--e--EEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCC
Q 017569 147 EQGKPYDKPNIVTG-ANVQVCWEKF---ARY--FEVE--L--KEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGST 213 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s-~~~h~s~~~~---~~~--~G~~--v--~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~ 213 (369)
.| +.+|+.. ...+.++... ... .|.. + ..+.+.. -|+++|++++++ +..+|++.....
T Consensus 128 -tg----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~d~~~l~~~l~~~~~~~aavi~Epv~g 198 (431)
T PRK06209 128 -TG----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY----NDIASLEALFEDHPGRIACVILEPATA 198 (431)
T ss_pred -hC----CCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC----CCHHHHHHHHHhCCCCEEEEEEccccC
Confidence 12 3455543 1221111000 000 0111 0 0111111 178999998864 334555432222
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
..+....+++|.++|+++ ++++++|+++.|+-. ...-....+.+ ..|.++ ..|.+++....|.++.++.
T Consensus 199 ~~~~~~~l~~l~~lc~~~------g~lLI~DEv~tG~~~--~~~g~~~~~gv-~PDi~t--~gK~lggG~p~~av~~~~~ 267 (431)
T PRK06209 199 DEPQDGFLHEVRRLCHEN------GALFILDEMITGFRW--HMRGAQKLYGI-VPDLSC--FGKALGNGFAVSALAGKRE 267 (431)
T ss_pred CCCCHHHHHHHHHHHHHc------CCEEEEEcccccCCc--CcchhhHHhCC-Ccceee--ehhhhcCCcccEEEEEHHH
Confidence 122234499999999999 999999999865321 10000101122 356655 4788776566677777532
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
.. ..+.......... ..++-..+.+....++..++|+.+..+++.+ +..++.++|++.|++
T Consensus 268 -i~-~~~~~~~~~~~~~-~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~-~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 268 -YM-ELGGLEHTDRERV-FLLSTTHGAETHALAAAIATMAIYRDEDVIE-RLHEQGAKLAAGVNE 328 (431)
T ss_pred -HH-hhhcccccCCCCc-eeeccCCCCCHHHHHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHH
Confidence 21 1100000000000 0000001122233555667778886665432 666777777777765
No 369
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.57 E-value=1.4e-05 Score=78.78 Aligned_cols=263 Identities=11% Similarity=-0.106 Sum_probs=137.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-.+.... ....+...++.+.+.++.+.+. ....++++|+||+..|++.++..+..
T Consensus 56 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 126 (422)
T PRK05630 56 HGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDNGL-----DHVFYSDSGSVSVEVAIKMALQYSKG--- 126 (422)
T ss_pred CCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 44578888888887653221111 1122334456666777764321 24899999999999999998875321
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHhhhcc-------------eeEEEeccCCccccC-------HHHHHHHHhhcCcE
Q 017569 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMN-------PVKAVELVDENTIC 205 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d-------~~~L~~~i~~~~~~ 205 (369)
.|.+ .+.+|+.- ...|-...-++...+- .+..+|.... ...+ .+.+++.+.++..+
T Consensus 127 -~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~iAA 203 (422)
T PRK05630 127 -QGHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSPQEISEYLRSLELLIDETVAA 203 (422)
T ss_pred -cCCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCChHHHHHHHHHHHHHHhhceEE
Confidence 1211 13455554 4445433333322221 1233433211 0111 24555556556666
Q ss_pred EEEeeC-CCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 206 VAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 206 v~~~~~-~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
|++.-. ....|.+ +.+++|.++|+++ ++++++|+++.|+-. ...-..+...-...|.++ ..|.+.
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv~PDi~t--~gK~l~ 273 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKH------DILLIADEIATGFGR--TGELFATLAAGVTPDIMC--VGKALT 273 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEecceeCCCc--CchhhHHHhcCCCCCeee--eechhh
Confidence 665542 4444554 4599999999999 999999999865422 000000111111356776 478875
Q ss_pred CC-CCeEEEEEeCCCCcccccccc-c-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHH
Q 017569 281 VY-AGVGWVVWRTKDDLPDELVFH-I-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVI 357 (369)
Q Consensus 281 ~p-~g~g~l~~~~~~~~~~~~~~~-~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~ 357 (369)
+. ...|++++++. .. +.+... . ....+. .++ .+ +.....+..++|+.+..+++.+ +..++.++|++.|+
T Consensus 274 gG~~p~~av~~~~~-i~-~~~~~~~~~~~~~h~-~T~--~g--~Pla~aaa~aaL~~l~~~~~~~-~~~~~g~~l~~~L~ 345 (422)
T PRK05630 274 GGFMSFAATLCTDK-VA-QLISTPNGGGALMHG-PTF--MA--NPLACAVAHASLEIIETGMWRK-QVKRIEAELIAGLS 345 (422)
T ss_pred cCccccceeeccHH-HH-HHHhccCCCCccccC-CCC--cC--CHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHH
Confidence 54 24566666532 21 222110 0 000000 111 11 1122444556677776554433 78888899998887
Q ss_pred hc
Q 017569 358 HS 359 (369)
Q Consensus 358 ~~ 359 (369)
++
T Consensus 346 ~l 347 (422)
T PRK05630 346 PL 347 (422)
T ss_pred Hh
Confidence 53
No 370
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.56 E-value=1.1e-05 Score=79.55 Aligned_cols=262 Identities=9% Similarity=-0.101 Sum_probs=139.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++..+... .....+.+.++.+.+.+++..+. ....++++|+||+-.|++.++..+..+
T Consensus 60 h~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~~-- 131 (429)
T PRK06173 60 YNHPRLNAAATNQLAKMSHIMF-GGFTHEPAVELAQKLLEILPPSL-----NKIFFADSGSVAVEVAMKMALQYQQAK-- 131 (429)
T ss_pred CCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHHHh--
Confidence 4458888888887765332111 11122333456666777664221 248999999999999999998753221
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc--------c-----eeEEEeccCCc-----cccCHHHHHHHHhh---cCc
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V-----ELKEVKLEEGY-----YVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G--------~-----~v~~v~~~~~~-----~~~d~~~L~~~i~~---~~~ 204 (369)
|.. .+.+|+.-.. .|-....++...| . .+..+|..... ..-+++.|++.+.. +..
T Consensus 132 --g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iA 208 (429)
T PRK06173 132 --GEV-QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIA 208 (429)
T ss_pred --CCC-CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEE
Confidence 211 1345655443 4432222222211 0 12334432100 01246778888853 345
Q ss_pred EEEEeeC-CCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccC
Q 017569 205 CVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (369)
Q Consensus 205 ~v~~~~~-~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~ 278 (369)
+|++.-. ....|.+ +-+++|.++|+++ ++++++|+++.|+-. ...-... .+.+ ..|.++ ..|.
T Consensus 209 Avi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv-~PDiv~--~gK~ 277 (429)
T PRK06173 209 ALILEPVVQGAGGMYFYSPTYLVKARELCDQY------GVLLIFDEIATGFGR--TGKLFALEHAGV-VPDIMC--IGKA 277 (429)
T ss_pred EEEEcchhhccCCcccCCHHHHHHHHHHHHHc------CCeEEecchhcCCCc--CCcchHHHhcCC-CCCEEE--eehh
Confidence 5555542 4444554 2389999999999 999999999865321 0000001 1112 367777 5788
Q ss_pred CCCCC-CeEEEEEeCCCCcccccccc-c-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHH
Q 017569 279 GLVYA-GVGWVVWRTKDDLPDELVFH-I-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFF 355 (369)
Q Consensus 279 l~~p~-g~g~l~~~~~~~~~~~~~~~-~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~ 355 (369)
+++.. .+|.++.+++ .. +.+... . .+.-+ .++ .+ +....++..++|+.+..+++.+ +..++.++|++.
T Consensus 278 l~gG~~p~~a~~~~~~-i~-~~~~~~~~~~~~~~--~T~--~g--~p~~~aaa~a~l~~i~~~~~~~-~~~~~g~~l~~~ 348 (429)
T PRK06173 278 LTGGYLTLSATITTEA-IA-QTICSGEAKCFMHG--PTF--MA--NPLACAIAAESIRLLLESPWQQ-NIQRIEAQLKQE 348 (429)
T ss_pred hhCCccccceEEecHH-HH-HHHhcCCCCccccC--CCC--Cc--CHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHH
Confidence 76553 4566666542 21 121100 0 01100 011 11 1223455567777776655422 888889999999
Q ss_pred HHhc
Q 017569 356 VIHS 359 (369)
Q Consensus 356 L~~~ 359 (369)
|++.
T Consensus 349 L~~~ 352 (429)
T PRK06173 349 LAPA 352 (429)
T ss_pred HHHh
Confidence 9864
No 371
>PRK07483 hypothetical protein; Provisional
Probab=98.55 E-value=2.6e-05 Score=77.35 Aligned_cols=259 Identities=10% Similarity=-0.020 Sum_probs=136.9
Q ss_pred CChHHHHHHHHHHhccCCC-CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..+|.+.+++.+.+++-.. .... ...+...++.+.|.+++.... ....++++|+||+-.|++.+|..+..
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-- 116 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSF--FTTEPAEALADRLVAAAPAGL-----EHVYFVSGGSEAVEAALKLARQYFVE-- 116 (443)
T ss_pred CCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCCcHHHHHHHHHHHHHHHHh--
Confidence 4457788888888765321 1111 122334456667777764221 24889999999999999999875321
Q ss_pred HhcCCCCCCCeEEec-CCCcchHHHHHhhhc------------ceeEEEeccCCcccc-------------CHHHHHHHH
Q 017569 146 KEQGKPYDKPNIVTG-ANVQVCWEKFARYFE------------VELKEVKLEEGYYVM-------------NPVKAVELV 199 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s-~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~-------------d~~~L~~~i 199 (369)
.|.. .+.+|+.- ...|-...-+....| ..+..+|... .++- .++++++++
T Consensus 117 --~g~~-~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (443)
T PRK07483 117 --IGQP-QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY-AYREQRAGESDEAYGQRLADELEAKI 192 (443)
T ss_pred --cCCC-CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc-cccccccCCCHHHHHHHHHHHHHHHH
Confidence 1211 23466653 344433322222211 1123333211 0110 135677666
Q ss_pred h----hcCcEEEEeeCCC-CcccCCC----HHHHHHHHHHhhhccCCCceEEeeccccccccc--ccCCCccccccCCCC
Q 017569 200 D----ENTICVAAILGST-LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP--FLYPDLEWDFRLPLV 268 (369)
Q Consensus 200 ~----~~~~~v~~~~~~~-~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~--~~~~~~~~~~~~~~~ 268 (369)
. ++..+|++.-..- ..|.+.| +++|.++|+++ ++++|+|+++.|+-.. ++.-+ .+.+ ..
T Consensus 193 ~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGfGRtG~~~a~~---~~gv-~P 262 (443)
T PRK07483 193 LELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY------GVLLILDEVMCGMGRTGTLFACE---EDGV-AP 262 (443)
T ss_pred HhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh------CCEEEEecceeCcccCcHHHHHh---hcCC-CC
Confidence 4 2344555543332 2355533 99999999999 9999999998765321 11100 1112 36
Q ss_pred cEEEEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhH
Q 017569 269 KSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVD 347 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~ 347 (369)
|.+++ .|.+.+.+ ..|.++.+++ .. +.+.....+..+ ..|..|.. ...++..++|+.+..+++.+ +..+
T Consensus 263 Div~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~h---~~T~~gnp--l~~aaa~a~l~~i~~~~l~~-~~~~ 332 (443)
T PRK07483 263 DLVTI--AKGLGAGYQPIGAVLASDR-IY-DAIADGSGFFQH---GHTYLGHA--TACAAALAVQRVIAEDGLLA-NVRA 332 (443)
T ss_pred Ceeee--hhhhccCccccEEEEEcHH-HH-HHHhcCCCcccc---CCCCCCCH--HHHHHHHHHHHHHHhcCHHH-HHHH
Confidence 77774 67777664 6788887643 21 222111111111 01111111 12344446666666555433 7778
Q ss_pred HHHHHHHHHHh
Q 017569 348 HKKLSSFFVIH 358 (369)
Q Consensus 348 ~a~~l~~~L~~ 358 (369)
+.++|++.|++
T Consensus 333 ~g~~l~~~L~~ 343 (443)
T PRK07483 333 RGEQLRARLRE 343 (443)
T ss_pred HHHHHHHHHHH
Confidence 88888888875
No 372
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.54 E-value=5.6e-07 Score=86.23 Aligned_cols=185 Identities=10% Similarity=0.040 Sum_probs=121.9
Q ss_pred CCeEEecCCCcch-HHHHHhhhcceeEEEec--cCC----ccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC
Q 017569 154 KPNIVTGANVQVC-WEKFARYFEVELKEVKL--EEG----YYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 154 ~~~Vi~s~~~h~s-~~~~~~~~G~~v~~v~~--~~~----~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~ 220 (369)
.|.+|+|+..|.- ...+|+.+|+.-..|.. +.+ .++||.-.+++.|++ +|.+++...|.+.+|..|.
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 5799999999976 44578888987433332 221 259999999999986 4778889999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
+-+|.++|++++ .+|+|.-|- +...+.|..|+. +..- ...+||++++-.-|++.|.-.=+++-|.-+-. .
T Consensus 311 i~kildi~eaha-----kfWLHasGh-aiAALt~aepnn-il~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~--a 381 (838)
T KOG0630|consen 311 ILKILDICEAHA-----KFWLHASGH-AIAALTCAEPNN-ILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGS--A 381 (838)
T ss_pred HHHHHHHHHHhh-----heeEeeccc-hhhheeecCccc-chhHHHHHHhhccchhHHHhCCCCCceEEeecccccc--c
Confidence 999999999983 499998763 222222223322 1111 45789999999999988876655554432111 1
Q ss_pred cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHH
Q 017569 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVI 357 (369)
Q Consensus 300 ~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~ 357 (369)
. ..|. +++- .++ -..++.+|.+++++|..-+.++ ....+.+-+-+.+.
T Consensus 382 a---Safe----sdpi--~re-kLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aS 431 (838)
T KOG0630|consen 382 A---SAFE----SDPI--LRE-KLDALPLWTALQALGGKAIADMIENAFLLCKILFEGAS 431 (838)
T ss_pred c---hhcc----cChH--HHH-hhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhh
Confidence 0 0111 1211 122 2358999999999998777765 34444444444443
No 373
>PRK06148 hypothetical protein; Provisional
Probab=98.51 E-value=1.7e-05 Score=86.22 Aligned_cols=251 Identities=10% Similarity=-0.012 Sum_probs=137.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-.... .+ ..+.+.++.+.|.+++..+. ....++++|+||+..|++.+|..
T Consensus 638 H~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~nSGsEA~e~AlklAr~~------ 703 (1013)
T PRK06148 638 HAHPRVVAAAARQAARLNTNT-RY--LHDAIVAYAERLTATLPDGL-----TVAFFVNSGSEANSLALRLARAH------ 703 (1013)
T ss_pred CCCHHHHHHHHHHHhhcCCcC-Cc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHh------
Confidence 345888888887776421111 11 23334456666777764321 24789999999999999999874
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhh--------c----ceeEEEeccCC---ccc-cC-------HHHHHHHHh--
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYF--------E----VELKEVKLEEG---YYV-MN-------PVKAVELVD-- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~--------G----~~v~~v~~~~~---~~~-~d-------~~~L~~~i~-- 200 (369)
.| +.+||.-.. .|-....++... + -.+..++.... .+. -| .+.+++.+.
T Consensus 704 -tG----r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 704 -TG----QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred -cC----CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 12 345555443 333222111111 1 01222221100 011 01 244555553
Q ss_pred ----hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc-c--ccCCCccccccCCCCc
Q 017569 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P--FLYPDLEWDFRLPLVK 269 (369)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~--~~~~~~~~~~~~~~~D 269 (369)
+++.+|++--.....|.+-+ ++++.++|+++ |+.+|+|+++.|+-. . ++.-+ .++ + ..|
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~------g~llI~DEVqtGfGRtG~~~~a~e-~~g--v-~PD 848 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA------GGVCIADEVQVGFGRVGSHWWAFE-TQG--V-VPD 848 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEecccCCCCCCCcchhhh-hcC--C-Ccc
Confidence 23566666655555566654 99999999999 999999999866422 1 11111 011 2 468
Q ss_pred EEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHH
Q 017569 270 SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHK 349 (369)
Q Consensus 270 si~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a 349 (369)
.+++ .|.+++....|.++.+++ .. +.+.....+. .++ .|.. . ..++..++|+.+..+++.+ +..++.
T Consensus 849 ivt~--gK~lggG~Plgav~~~~e-i~-~~~~~g~~~~----~Tf--~gnp-l-a~aaa~a~L~~i~~e~l~~-~~~~~G 915 (1013)
T PRK06148 849 IVTM--GKPIGNGHPMGAVVTTRE-IA-DSFDNGMEYF----NTF--GGNP-V-SCAIGLAVLDIIEDEDLQR-NALEIG 915 (1013)
T ss_pred eeee--cccccCCcceEEEEEcHH-HH-hhccCCCccc----cCC--CCCH-H-HHHHHHHHHHHHhhccHHH-HHHHHH
Confidence 8774 788877788899988642 21 2221100011 111 1221 2 2344446677776665544 777888
Q ss_pred HHHHHHHHhc
Q 017569 350 KLSSFFVIHS 359 (369)
Q Consensus 350 ~~l~~~L~~~ 359 (369)
++|++.|+++
T Consensus 916 ~~l~~~L~~l 925 (1013)
T PRK06148 916 NYLLAGLREL 925 (1013)
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 374
>PRK06149 hypothetical protein; Provisional
Probab=98.51 E-value=2.3e-05 Score=85.02 Aligned_cols=251 Identities=10% Similarity=-0.093 Sum_probs=135.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.+....... ........++.+.+++++..+. ....++++|+|||..|++.++..
T Consensus 600 ~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~elae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------- 664 (972)
T PRK06149 600 GHPRLAAAAARQWSLLNTNS---RFHYAAVAEFSERLAALAPDGL-----DTVFLVNSGSEANDLAIRLAWAA------- 664 (972)
T ss_pred CCHHHHHHHHHHHHhccccc---cccCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHh-------
Confidence 45778888877765432221 1122334455666777763211 24899999999999999998764
Q ss_pred cCCCCCCCeEEecCC-CcchHHHHHhhhc----------c---eeEEEeccC-Cc--cc-cC-----HHHHHHHHh----
Q 017569 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFE----------V---ELKEVKLEE-GY--YV-MN-----PVKAVELVD---- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G----------~---~v~~v~~~~-~~--~~-~d-----~~~L~~~i~---- 200 (369)
.| +.+|+.... .|-....+....+ . .+..++... .. +. .+ .+++++.++
T Consensus 665 tg----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 665 SG----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred cC----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 12 345555443 4422111111100 0 123333221 00 11 11 244444442
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-cccc-ccCCCCcEEE
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-FRLPLVKSIN 272 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~~~~~~Dsi~ 272 (369)
+++.+|++.-.....|.+.+ +++|.++|+++ |+++|+|+++.|+-. .... ..+. +.+ ..|.++
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~------g~llI~DEV~tGfGR--tG~~~~a~e~~gv-~PDivt 811 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR------GGVCIADEVQVGYGR--LGHYFWGFEQQGV-VPDIIT 811 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEEeehhcCCc--cCccchhhhhcCC-CCCEEE
Confidence 23456666555555577766 99999999999 999999999854322 1110 0111 112 468777
Q ss_pred EcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHH
Q 017569 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLS 352 (369)
Q Consensus 273 ~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l 352 (369)
..|.+++....|.++++++ .. +.+.. ..+..+ ++ +..+. ..++..++|..+..+++.+ +..++.+||
T Consensus 812 --~gK~lg~G~Pl~av~~~~~-i~-~~~~~-~~~~~s---T~---~gnP~-~~aaala~L~~i~~e~l~~-~~~~~G~~l 878 (972)
T PRK06149 812 --MAKGMGNGHPLGAVITRRE-IA-EALEA-EGYFFS---ST---GGSPV-SCRIGMAVLDVLREEKLQE-NARRVGDHL 878 (972)
T ss_pred --ecccccCCeeeEEEEEcHH-HH-hhhcc-CCcccC---CC---CCCHH-HHHHHHHHHHHHHhcCHHH-HHHHHHHHH
Confidence 4788776677788888653 21 22211 111111 11 11112 2344446666666665443 677777888
Q ss_pred HHHHHhc
Q 017569 353 SFFVIHS 359 (369)
Q Consensus 353 ~~~L~~~ 359 (369)
++.|+++
T Consensus 879 ~~~L~~l 885 (972)
T PRK06149 879 KARLEAL 885 (972)
T ss_pred HHHHHHH
Confidence 8888764
No 375
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.48 E-value=6.4e-05 Score=75.07 Aligned_cols=269 Identities=8% Similarity=-0.085 Sum_probs=137.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++.-..... .....+...++.+.+.+++.............++++|+||+-.|++.++..+..+
T Consensus 80 h~~p~i~~Ai~~q~~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-- 156 (472)
T PRK08742 80 HAEPRIGAAIAAQAGELEQVML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR-- 156 (472)
T ss_pred CCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhc--
Confidence 4467788888877654221111 1112233446666777776421000001248999999999999999998754321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhcc------------eeEEEeccCCccc------------cCHHHHHHHHhh
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYV------------MNPVKAVELVDE 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~------------~d~~~L~~~i~~ 201 (369)
|.. .+.+|+.-.. .|-...-++...|. ++..+|... .++ -+++.+++.++.
T Consensus 157 --g~~-~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (472)
T PRK08742 157 --GEH-RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPD-AYLAEPGQSAEDYALQAADALQALFEQ 232 (472)
T ss_pred --CCC-CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCC-ccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 211 1345655444 44333223222221 123344321 011 135677777753
Q ss_pred ---cCcEEEEee-CCCCcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 202 ---NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 202 ---~~~~v~~~~-~~~~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
+..+|++.- .....|.+. -++++.++|+++ |+++|+|+++.|+-. ...-..++..-...|.+++
T Consensus 233 ~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~------gillI~DEV~TGfGR--tG~~~a~e~~gv~PDiv~~ 304 (472)
T PRK08742 233 SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH------GAFLIADEIATGFGR--TGTLFACEQAGVMPDLLCL 304 (472)
T ss_pred CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchHHHhcCCCCCEEEE
Confidence 345555543 244546542 399999999999 999999999876532 1100011111114788884
Q ss_pred cCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHH
Q 017569 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLS 352 (369)
Q Consensus 274 ~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l 352 (369)
.|.+++.+ ..|.++.+++ .. +.+..... .+...-..|..|.. ...++..++|+.+..+++.+ +..++.++|
T Consensus 305 --gKgl~gG~~Plaav~~~~e-i~-~~~~~~~~-~~~~~h~~T~~gnp--l~~Aaa~a~L~~i~~~~l~~-~~~~~g~~l 376 (472)
T PRK08742 305 --SKGLTGGFLPLSAVLATQQ-LY-DAFLDDSR-ERAFLHSHSYTGNP--LACAAALATLDIFADDDVIA-RNQPTAARM 376 (472)
T ss_pred --cccccCCCCCcceeeccHH-HH-HHhhccCc-cCccCcCCCCCccH--HHHHHHHHHHHHHHHCCHHH-HHHHHHHHH
Confidence 68876664 6777777643 21 12111000 00000011111211 12344446666676666543 566667777
Q ss_pred HHHHHh
Q 017569 353 SFFVIH 358 (369)
Q Consensus 353 ~~~L~~ 358 (369)
++.++.
T Consensus 377 ~~~~~~ 382 (472)
T PRK08742 377 TQLAAQ 382 (472)
T ss_pred HHHHHH
Confidence 766554
No 376
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.47 E-value=4.7e-05 Score=75.82 Aligned_cols=255 Identities=10% Similarity=-0.001 Sum_probs=134.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+........ .....+.+.++.+.+.+++..... ......++++|+||+..|++.++..
T Consensus 74 H~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~--~~~~~f~~~SGsEAve~AlklAr~~------ 144 (459)
T PRK06931 74 HNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGK--EYCLQFTGPSGADAVEAAIKLAKTY------ 144 (459)
T ss_pred CCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCccc--cceEEEeCCCcHHHHHHHHHHHHHh------
Confidence 4467888888877764321111 112234555667778777643210 0012345589999999999998864
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc------------ceeEEEeccCCccc--------cCHHHH----HHHHhh
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYV--------MNPVKA----VELVDE 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~--------~d~~~L----~~~i~~ 201 (369)
.| +.+|+.-.. .|-...-++...| -++..+|... .++ -+.+.+ ++.+++
T Consensus 145 -tg----r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (459)
T PRK06931 145 -TG----RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPH-EYRCPLGIGGEAGVKALTYYFENFIED 218 (459)
T ss_pred -cC----CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCc-cccccccCCchhHHHHHHHHHHHHHHh
Confidence 12 456665444 3433322222211 1234454321 011 122333 333331
Q ss_pred ------cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEE
Q 017569 202 ------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 202 ------~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi 271 (369)
+..+|++--.....|.+.| ++++.++|+++ |+++++|+++.|+-. ...-..+...-...|.+
T Consensus 219 ~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~LlI~DEV~tGfGR--tG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 219 VESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH------GILLIVDEVQAGFAR--TGKMFAFEHAGIEPDII 290 (459)
T ss_pred hhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhcCCc--CchHHHhhhcCCCCCEE
Confidence 2456666544444455532 99999999999 999999999876532 00000111111146888
Q ss_pred EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHH
Q 017569 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKL 351 (369)
Q Consensus 272 ~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~ 351 (369)
++ .|.+.+....|+++.++. . ..+. .... ..|..|.. ...++..++|+.+..+++.+ +..++.++
T Consensus 291 t~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~~-----~~T~~gnp--la~aaala~L~~l~~~~l~~-~~~~~G~~ 355 (459)
T PRK06931 291 VM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGGH-----TGTFRGNQ--LAMATGLTTLKILKEENLAQ-NAAERGEW 355 (459)
T ss_pred Ee--cccccCCcceeeeeeHHH--H-hhcc--CCCC-----CCCCCCCH--HHHHHHHHHHHHHHhCCHHH-HHHHHHHH
Confidence 74 677766677888776532 2 2221 1111 11111221 22344446666666555433 67777778
Q ss_pred HHHHHHhc
Q 017569 352 SSFFVIHS 359 (369)
Q Consensus 352 l~~~L~~~ 359 (369)
|++.|+++
T Consensus 356 l~~~L~~l 363 (459)
T PRK06931 356 LKAQLAEL 363 (459)
T ss_pred HHHHHHHH
Confidence 88877653
No 377
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.47 E-value=1.2e-05 Score=78.25 Aligned_cols=260 Identities=12% Similarity=-0.040 Sum_probs=139.9
Q ss_pred CChHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
...+.+.+++.+-+++-.+. ...+.....+ ++.+.|+++..-.. ...+.+++|||+|+-.|+..++..|..+
T Consensus 60 h~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~--~LA~~L~~~aP~~~----l~~vFf~~sGSeAvEtAlKma~qY~~~~- 132 (449)
T COG0161 60 HGRPEIAEAIKKQLDKLPHVMFGGFTHEPAI--ELAEKLAELAPEGG----LDHVFFTDSGSEAVETALKMALQYWRAR- 132 (449)
T ss_pred cCCHHHHHHHHHHHHhCCchhhcccCCchHH--HHHHHHHHhCCCCC----ccEEEEeCCchHHHHHHHHHHHHHHHhc-
Confidence 44577888888766553222 1112222222 45566888776221 2358999999999999999999887642
Q ss_pred HhcCCCCCCCeEEecC-CCcchHHHHHhhhcc-------------eeEEEeccC-------Cccc----cCHHHHHHHHh
Q 017569 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEE-------GYYV----MNPVKAVELVD 200 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~G~-------------~v~~v~~~~-------~~~~----~d~~~L~~~i~ 200 (369)
|.+. +.++|.-. ..|-...-++...|. .+..+|... +.+. -..++|++.|.
T Consensus 133 ---G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~ 208 (449)
T COG0161 133 ---GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALIL 208 (449)
T ss_pred ---CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHH
Confidence 3322 23455433 344444444444331 122333321 0011 23567777776
Q ss_pred h---cC-cEEEEeeCCCC-cccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccc---cccCCCccccccCCCC
Q 017569 201 E---NT-ICVAAILGSTL-TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA---PFLYPDLEWDFRLPLV 268 (369)
Q Consensus 201 ~---~~-~~v~~~~~~~~-tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~---~~~~~~~~~~~~~~~~ 268 (369)
+ .+ .++++--..-- .|.+-| ++++.++|++| |+++|.|++..|+-. .|-+.. .. ..-
T Consensus 209 ~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky------~ILlI~DEV~tGFGRTG~~FA~e~--~g---i~P 277 (449)
T COG0161 209 EHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY------GILLIADEVATGFGRTGKMFACEH--AG---IVP 277 (449)
T ss_pred hcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc------CcEEEeecceeCCCcCchhhhhhh--cC---CCC
Confidence 5 33 33443332223 455533 99999999999 999999998766443 122211 11 135
Q ss_pred cEEEEcCccCCCCCC-CeEEEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhh
Q 017569 269 KSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCV 346 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~ 346 (369)
|.++ .-|-+.+.+ ..|.++++++ . -+.+... ..-+.+ .+|. |-+-...++..+.|+.+.++++.+ +..
T Consensus 278 Di~~--~aKGLT~GY~Pl~a~l~~~~-I-~~~~~~~~~~~f~H---G~TY--sghPlacAaAla~L~i~e~e~l~~-~~~ 347 (449)
T COG0161 278 DILC--LAKGLTGGYLPLSAVLTSDR-I-YEAFSDGDAGAFMH---GHTY--SGNPLACAAALANLDILEEEDLLE-RVA 347 (449)
T ss_pred Ceee--ecccccccchhhHhHhhhHH-H-HHHHhcccCCeecc---CCcc--ccCHHHHHHHHHHHHHHHhcCHHH-HHH
Confidence 7777 456654433 3355555442 1 1222221 111111 1121 111112333446666667777766 666
Q ss_pred HHHHHHHHHHHh
Q 017569 347 DHKKLSSFFVIH 358 (369)
Q Consensus 347 ~~a~~l~~~L~~ 358 (369)
++..+|.++|++
T Consensus 348 ~~~~~l~~~L~~ 359 (449)
T COG0161 348 EIGAYLQAGLQA 359 (449)
T ss_pred HHHHHHHHHHHH
Confidence 899999999987
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.47 E-value=2.2e-05 Score=72.25 Aligned_cols=251 Identities=12% Similarity=-0.004 Sum_probs=134.6
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+-.+.-... .-......-.+..+.+.++||.+. ..-++.|.||+-.++..+|......+
T Consensus 76 chpki~~aLqeq~~kLtls--srafYnd~~~~f~~~vt~lf~~~k-------vlpmnTGaEa~Eta~KLaR~wgy~~K-- 144 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLTLS--SRAFYNDVLGEFAEYVTKLFGYDK-------VLPMNTGAEAVETACKLARKWGYRKK-- 144 (427)
T ss_pred CCHHHHHHHHHHHhHhhhh--hHHHhhhhHHHHHHHHHHhcCcce-------eeecccchhHHHHHHHHHHHHHHhhc--
Confidence 3455666666554321111 001122333455567999999986 67788889999999999886422211
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHH-------hhhcce------eEEEeccCCccccCHHHHHHHHhhc-CcEEEEeeCC
Q 017569 148 QGKPYDKPNIVTGA-NVQVCWEKFA-------RYFEVE------LKEVKLEEGYYVMNPVKAVELVDEN-TICVAAILGS 212 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~-~~h~s~~~~~-------~~~G~~------v~~v~~~~~~~~~d~~~L~~~i~~~-~~~v~~~~~~ 212 (369)
+-+..+.+++... ..|--...+. .+.|.+ +..||.+ |.++|+.++++. ...+++.--.
T Consensus 145 -~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~------d~eale~~l~~~~vaaFivEPIQ 217 (427)
T KOG1402|consen 145 -NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG------DAEALEVALKSPNVAAFIVEPIQ 217 (427)
T ss_pred -cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC------CHHHHHHHhcCCCeeEEEeeccc
Confidence 1111122333322 2232111110 111221 4444443 679999999763 4455555556
Q ss_pred CCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC-CCCeEE
Q 017569 213 TLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGW 287 (369)
Q Consensus 213 ~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~-p~g~g~ 287 (369)
-..|.+-| ++++.++|.+| +++++.|+.+.|.... ..-...+..-...|.+. ..|.+.+ -+..+.
T Consensus 218 GEaGVvvP~~GYL~~vreLCtky------nvl~I~DEvQTGl~RT--Gk~la~d~env~PDivi--lgKalSGG~~Pvsa 287 (427)
T KOG1402|consen 218 GEAGVVVPPPGYLKKVRELCTKY------NVLLIADEVQTGLART--GKLLACDYENVRPDIVI--LGKALSGGVYPVSA 287 (427)
T ss_pred cccceEeCCchhHHHHHHHHHhh------cEEEEehhhhhccccc--CcEEEeehhhcCCCeEE--EeccccCCeeeeEE
Confidence 66677643 99999999999 9999999999875431 11111222222456555 4566543 344455
Q ss_pred EEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++.+. ... . |-.+.+ ||-.+..++++.+++..+..---+++ |+..+-..|+.+|+++.
T Consensus 288 vl~~~~-im~-~------~~pgeH------gsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~ 348 (427)
T KOG1402|consen 288 VLADDD-IML-N------IKPGEH------GSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQ 348 (427)
T ss_pred EEecHH-HHh-c------cCCCcc------ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 554332 211 1 111111 22223334555544444433222333 89999999999998754
No 379
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.44 E-value=6e-06 Score=74.93 Aligned_cols=157 Identities=14% Similarity=0.057 Sum_probs=107.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCe-EEecCCCcchHHHH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPN-IVTGANVQVCWEKF 170 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~-Vi~s~~~h~s~~~~ 170 (369)
+-..||+. +++.||.+... ...-+ .+||.|+..++...+++ +++ +++...-|-.++..
T Consensus 66 GRdtLe~v----yA~vf~aE~a~---VRpq~-isGTHAI~~aLfg~LRp-------------gDell~i~G~PYDTLeev 124 (416)
T COG4100 66 GRDTLERV----YAQVFGAEAAL---VRPQI-ISGTHAIACALFGILRP-------------GDELLYITGSPYDTLEEV 124 (416)
T ss_pred chhHHHHH----HHHHhccccce---eeeee-ecchhHHHHHHHhccCC-------------CCeEEEecCCcchhHHHH
Confidence 44445544 89999998621 11223 36799998888887653 344 33333334444444
Q ss_pred Hh----------hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee----CCCCcccCCCHHHHHHHHHHhhhccC
Q 017569 171 AR----------YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTKKNEETG 236 (369)
Q Consensus 171 ~~----------~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~l~~I~~l~~~~~~~~~ 236 (369)
.- -+|+..+-||+..+ +++|.+.++.++.++|++|.+.- ..-|+-.+++++++.++.|+.|.
T Consensus 125 IG~rg~~~gSL~dfgi~Y~~v~Lt~~-gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp--- 200 (416)
T COG4100 125 IGLRGEGQGSLKDFGIKYKAVPLTAD-GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP--- 200 (416)
T ss_pred hccCCCCcccHHHhCcceeecccccC-CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC---
Confidence 32 34566788998875 89999999999999999887653 34455566888888898888755
Q ss_pred CCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC
Q 017569 237 WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (369)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~ 281 (369)
++.+.||.|||.++- ..-+. ..++|.+..|.=|.-++
T Consensus 201 -n~ivFVDNCYGEFvE----~~EPt---~vGaDliAGSLIKNpGG 237 (416)
T COG4100 201 -NVIVFVDNCYGEFVE----EKEPT---HVGADLIAGSLIKNPGG 237 (416)
T ss_pred -CEEEEEeccchhhhh----ccCcc---ccchhhhccceeeCCCC
Confidence 899999999998654 11122 23899999888887543
No 380
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.35 E-value=6.6e-05 Score=74.24 Aligned_cols=266 Identities=11% Similarity=-0.034 Sum_probs=127.4
Q ss_pred CChHHHH--HHHHHHhccCCC-CCCC-CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHH
Q 017569 67 WMEPECD--KLVMASINKNYV-DMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (369)
Q Consensus 67 ~~~~~v~--~~~~~~~~~n~~-~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (369)
...|.+. +++.+.+++-.. .... ......+ .++.+.++++.+.+. .....++++|+||+..|++.++....
T Consensus 54 h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~----~~~v~f~~sGsEAve~AlklAr~~t~ 128 (431)
T TIGR03251 54 MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLGDPA----LPHLFFIEGGALAVENALKTAFDWKS 128 (431)
T ss_pred CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcCCCC----cCEEEEeCCcHHHHHHHHHHHHHHhh
Confidence 3346666 677766653211 1111 1112222 234445666542111 12478999999999999999986421
Q ss_pred HHHHhcCCCC-CCCeEEecC-CCcchHHHHHhhhcce-eE----------EE-------eccCCcc-------ccCHHHH
Q 017569 143 QKRKEQGKPY-DKPNIVTGA-NVQVCWEKFARYFEVE-LK----------EV-------KLEEGYY-------VMNPVKA 195 (369)
Q Consensus 143 ~~~~~~g~~~-~~~~Vi~s~-~~h~s~~~~~~~~G~~-v~----------~v-------~~~~~~~-------~~d~~~L 195 (369)
......|.+. .+.+|+.-. ..|-...-++...|-. .. .+ |.+.+.. .-+++++
T Consensus 129 ~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 208 (431)
T TIGR03251 129 RHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQA 208 (431)
T ss_pred cchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHH
Confidence 1001122111 123555444 3443333333222211 00 01 1110000 0134556
Q ss_pred HHHHh---hcCcEEEEeeCCCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCC
Q 017569 196 VELVD---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLV 268 (369)
Q Consensus 196 ~~~i~---~~~~~v~~~~~~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~ 268 (369)
++.+. +++.+|++.-.....|.+ +.+++|.++|+++ |+.+++|+++.|+-.. ..-..++..-...
T Consensus 209 ~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Grt--G~~~a~~~~gv~P 280 (431)
T TIGR03251 209 RAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH------DALLIFDEVQTGVGLT--GTAWAYQQLGVQP 280 (431)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhccCcc--chHHHHHhcCCCC
Confidence 66664 356777777666666765 4599999999999 9999999998864321 0000111111147
Q ss_pred cEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHH
Q 017569 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDH 348 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~ 348 (369)
|.+++ .|.+ +.+|++. +++ +.........+.... ..|..++ ....++..++|+.+..+++.+ +..++
T Consensus 281 Di~~~--gK~~---~~~g~~~-~~~--i~~~~~~~~~~~~~~--~~T~~gn--pl~~aaa~a~L~~l~~~~l~~-~~~~~ 347 (431)
T TIGR03251 281 DIVAF--GKKT---QVCGIMA-GRR--VDEVADNVFAVPSRL--NSTWGGN--LVDMVRATRILEIIEEERLVD-NARVQ 347 (431)
T ss_pred CEEEe--cccC---ccceEEe-cch--HHHhhhhcccCcccc--CCCCCCC--HHHHHHHHHHHHHHHhcCHHH-HHHHH
Confidence 88875 4443 2345553 332 100000000011110 1111122 222444456677776666533 56666
Q ss_pred HHHHHHHHHh
Q 017569 349 KKLSSFFVIH 358 (369)
Q Consensus 349 a~~l~~~L~~ 358 (369)
.++|.++|++
T Consensus 348 g~~l~~~L~~ 357 (431)
T TIGR03251 348 GAHLLARLHE 357 (431)
T ss_pred HHHHHHHHHH
Confidence 6777777665
No 381
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.26 E-value=0.00025 Score=70.54 Aligned_cols=262 Identities=10% Similarity=-0.053 Sum_probs=129.8
Q ss_pred CChHHHHHHHHHH--hccCCCCC-CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMAS--INKNYVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~--~~~n~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|.+.+++.+. ...-...+ ...+...++.+.+.+.+.+++.-+. ....++++|+||+-.|++.++..+..
T Consensus 74 h~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~~ 148 (464)
T TIGR00699 74 YNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQ-----DQVWTGMSGSDANELAFKAAFMYYRS 148 (464)
T ss_pred CCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 4457777777763 22211111 1122233344444443444543211 24899999999999999999875421
Q ss_pred H-HHh----cCCC---------CC--CCeEEecCC-CcchHHHHHhhhcc-----------eeEEEeccCCcc-------
Q 017569 144 K-RKE----QGKP---------YD--KPNIVTGAN-VQVCWEKFARYFEV-----------ELKEVKLEEGYY------- 188 (369)
Q Consensus 144 ~-~~~----~g~~---------~~--~~~Vi~s~~-~h~s~~~~~~~~G~-----------~v~~v~~~~~~~------- 188 (369)
. |.. .|.+ .. +.+||.-.. .|-....++...|- .+..+|.....+
T Consensus 149 ~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 228 (464)
T TIGR00699 149 KQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVK 228 (464)
T ss_pred cCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccc
Confidence 1 000 0000 01 125665444 45443333333221 112222211000
Q ss_pred ------ccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 189 ------VMNPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 189 ------~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
.-+++.|++++++ +..+|++.-.....|.+-| +++|.++|+++ |+++++|+++.|+-. .
T Consensus 229 ~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGr--t 300 (464)
T TIGR00699 229 ENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------NVAFIVDEVQTGVGA--T 300 (464)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeeeeeCCCC--C
Confidence 0145677787753 3566776666666677766 99999999999 999999999865422 1
Q ss_pred CCCcccc-ccC-CCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHH
Q 017569 256 YPDLEWD-FRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 256 ~~~~~~~-~~~-~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~ 333 (369)
..-..+. +.+ ...|.+++ .|.+++ .|+++.+ + .+.. ....+.++ ++ +-+....++..++|+
T Consensus 301 G~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~~~-~-~~~~---~~~~~~~~---T~----~gnp~~~aaa~a~L~ 363 (464)
T TIGR00699 301 GKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFFHD-P-AFRP---NKPYRQFN---TW----MGDPSRALILREIIQ 363 (464)
T ss_pred cchhHHHhcCCCCCCCEEEe--hhhhcc---CCccccc-h-hccC---CCCccccc---CC----CCCHHHHHHHHHHHH
Confidence 1000111 112 14788774 677631 1333322 1 1100 00111111 11 111122344445666
Q ss_pred HhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 334 RLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 334 ~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
.+..+++.+ +..++.++|++.|+++
T Consensus 364 ~l~~~~l~~-~~~~~g~~l~~~L~~l 388 (464)
T TIGR00699 364 EIKRKDLLE-NVAHVGDYLYTGLEDL 388 (464)
T ss_pred HHHhcCHHH-HHHHHHHHHHHHHHHH
Confidence 665555433 6667777888888764
No 382
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.26 E-value=8.3e-05 Score=73.77 Aligned_cols=267 Identities=10% Similarity=-0.027 Sum_probs=128.1
Q ss_pred CChHHHHH--HHHHHhccCCC-CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDK--LVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~--~~~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
..+|.+.+ ++.+.++.-.. .........+...++.+.+.++.+-+. .....++++|+||+..|++.++..+..
T Consensus 61 h~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~----~~~v~f~~SGsEAve~AlKlAr~~~~~ 136 (443)
T PRK08297 61 MNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPE----LPHLFFVDGGALAVENALKVAFDWKSR 136 (443)
T ss_pred CCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCC----CCEEEEeCchHHHHHHHHHHHHHHhhc
Confidence 34566777 77766643111 000001112223345555666653111 134899999999999999999875321
Q ss_pred HHHhcCCC-CCCCeEEecCC-CcchHHHHHhhhcce-----------eEEEeccC-------Cc----c---ccCHHHHH
Q 017569 144 KRKEQGKP-YDKPNIVTGAN-VQVCWEKFARYFEVE-----------LKEVKLEE-------GY----Y---VMNPVKAV 196 (369)
Q Consensus 144 ~~~~~g~~-~~~~~Vi~s~~-~h~s~~~~~~~~G~~-----------v~~v~~~~-------~~----~---~~d~~~L~ 196 (369)
++...|.+ ..+.+|+.-.. .|-...-++...|.. ...+|... .+ - .-++++++
T Consensus 137 ~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (443)
T PRK08297 137 KNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQAR 216 (443)
T ss_pred cccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHH
Confidence 11111210 11345665443 443333333222211 00011100 00 0 01345666
Q ss_pred HHHh---hcCcEEEEeeCCCCcccC----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCC
Q 017569 197 ELVD---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLV 268 (369)
Q Consensus 197 ~~i~---~~~~~v~~~~~~~~tG~~----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~ 268 (369)
+.+. +++.+|++.-.....|.+ +.+++|.++|+++ |+++++|+++.|+-. ...-..+. +.+ ..
T Consensus 217 ~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv-~P 287 (443)
T PRK08297 217 AAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH------DALLIFDEVQTGVGL--TGTAWAYQQLGV-RP 287 (443)
T ss_pred HHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccCc--cchHHHHHhcCC-CC
Confidence 7775 345667666555555655 4599999999999 999999999876422 00000001 112 46
Q ss_pred cEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHH
Q 017569 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDH 348 (369)
Q Consensus 269 Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~ 348 (369)
|.+++ .|.+ |. +|++ ++++ . ..... . .+........|..+.. ....+..++|..+..+++.+ +..++
T Consensus 288 Div~~--gK~l--~~-~a~l-~~~~-i-~~~~~-~-~~~~~~~~~~T~~gnp--l~~aaa~a~L~~l~~~~l~~-~~~~~ 354 (443)
T PRK08297 288 DIVAF--GKKT--QV-CGIM-AGRR-V-DEVED-N-VFAVSSRINSTWGGNL--VDMVRARRILEVIEEDGLVE-NAARQ 354 (443)
T ss_pred CEEEe--cccc--cc-ccee-cchH-H-HHhhh-h-hccCccccCCCCCccH--HHHHHHHHHHHHHHhcCHHH-HHHHH
Confidence 88774 6765 22 2444 4332 1 00000 0 0000000011111211 12333445566665554333 77788
Q ss_pred HHHHHHHHHhc
Q 017569 349 KKLSSFFVIHS 359 (369)
Q Consensus 349 a~~l~~~L~~~ 359 (369)
.++|++.|+++
T Consensus 355 g~~l~~~L~~l 365 (443)
T PRK08297 355 GEYLLARLEEL 365 (443)
T ss_pred HHHHHHHHHHH
Confidence 88888888764
No 383
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.20 E-value=0.00056 Score=64.92 Aligned_cols=203 Identities=11% Similarity=-0.055 Sum_probs=115.6
Q ss_pred CChHHHHHHHHHHhccCCCC---CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
+..|++.+++.+-++.-.+. +...+ ..++++. +.+..+-.. ...+.++++|||||..|+..+|.....
T Consensus 72 hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~----l~~~~~~~~----~~rvff~nsGTeAne~ALK~Ark~~~~ 142 (433)
T KOG1401|consen 72 HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEV----LSAVLGKGS----AERVFFCNSGTEANETALKFARKFTGK 142 (433)
T ss_pred CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHH----HHhcccCCC----ccEEEEecCCcHHHHHHHHHHHHhhcc
Confidence 44577777777655442211 11112 3333333 444443221 234899999999999999999875321
Q ss_pred HHHhcCCCCCCCeEEe-cCCCcchHHHHHhhhcceeEEEeccC---C---ccccCHHHHHHHHhhcC---cEEEEeeCCC
Q 017569 144 KRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEVELKEVKLEE---G---YYVMNPVKAVELVDENT---ICVAAILGST 213 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~-s~~~h~s~~~~~~~~G~~v~~v~~~~---~---~~~~d~~~L~~~i~~~~---~~v~~~~~~~ 213 (369)
+ .+..+..+|. -...|--..-++...+.....+|.++ + ---=|+.+|++.++... .+|++--..-
T Consensus 143 ~-----~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqG 217 (433)
T KOG1401|consen 143 K-----HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQG 217 (433)
T ss_pred c-----CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccC
Confidence 1 0111223544 44455444444443333222222211 0 00116899999998754 5666666655
Q ss_pred CcccC--CC--HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 214 LTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 214 ~tG~~--~~--l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
..|.+ +| +..|.++|+++ ++.+|.|+++-|+.. +.+.+.+..--...|.+| ..|.+.+....|...
T Consensus 218 aGG~~p~~peFl~~L~k~C~~~------~vl~I~DEV~tG~gR--~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~ 287 (433)
T KOG1401|consen 218 AGGIIPADPEFLIGLRKECDDN------GVLLIFDEVQTGLGR--LGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATG 287 (433)
T ss_pred CCCcccCCHHHHHHHHHHHhhc------CceEEeehhhhCccc--cchHHHHHHhCcCCccee--ehhhccCCceeEEEe
Confidence 55554 33 77899999999 999999999887443 222111111112346666 568888888889999
Q ss_pred EeCC
Q 017569 290 WRTK 293 (369)
Q Consensus 290 ~~~~ 293 (369)
++++
T Consensus 288 v~~k 291 (433)
T KOG1401|consen 288 VRDK 291 (433)
T ss_pred ehHH
Confidence 8764
No 384
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.20 E-value=5.9e-05 Score=70.98 Aligned_cols=249 Identities=12% Similarity=-0.034 Sum_probs=138.0
Q ss_pred CChHHHHHHHHHHhccCCCCCC--CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMD--EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~--~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
..+|.+.+++.+-+..-++... ..+-..++ .+.|..++--+- ....|+++|+|||-++++.++..+.
T Consensus 66 HchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~----Ae~L~s~~P~~l-----~~vfF~nsGsEANelal~mar~Yt~-- 134 (442)
T KOG1404|consen 66 HCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDL----AEALVSKLPGDL-----KVVFFVNSGSEANELALKMARLYTG-- 134 (442)
T ss_pred CCChHHHHHHHHhhhhhEEeeccccCCcHHHH----HHHHHHhCCCCc-----eEEEEecCCchHHHHHHHHHHHhcC--
Confidence 3457666666655432111111 12222233 333555543332 4589999999999999999988632
Q ss_pred HHhcCCCCCCCeEE-ecCCCcchHHHHHhhhcceeEEEeccC-----------C--cc--ccC-----H----HHHHHHH
Q 017569 145 RKEQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKEVKLEE-----------G--YY--VMN-----P----VKAVELV 199 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi-~s~~~h~s~~~~~~~~G~~v~~v~~~~-----------~--~~--~~d-----~----~~L~~~i 199 (369)
.-.+| .....|-....++.+.|.....-+... + .+ .=+ . +++++.|
T Consensus 135 ---------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 135 ---------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred ---------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 12344 445555555555555444433222211 0 00 000 1 3334444
Q ss_pred hh----cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCc
Q 017569 200 DE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVK 269 (369)
Q Consensus 200 ~~----~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D 269 (369)
.. ...++++-.-.-..|.+.+ +++..++|+++ |..++.|+++.++-. .. .-+.|. ----|
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~------Ggl~IaDEVqtGfGR--tG--~~wgfe~h~v~PD 275 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR------GGLFIADEVQTGFGR--TG--HMWGFESHGVVPD 275 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc------CCEEEehhhhhcccc--cc--ccccccccCCCcc
Confidence 32 2345666666666677754 89999999999 999999999887554 11 112222 11234
Q ss_pred EEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHH
Q 017569 270 SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHK 349 (369)
Q Consensus 270 si~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a 349 (369)
.+| .-|.++.....|.+++..+ .. ..+.....+.. ++ +..+.. .+..-+.|+.+.++.+++ ++.+..
T Consensus 276 IvT--mAKgiGnG~Pl~AVvtt~E-Ia-~v~~~~~~~fn----Ty---ggnP~a-~avg~aVL~Vikee~LqE-~aa~vG 342 (442)
T KOG1404|consen 276 IVT--MAKGIGNGFPLGAVVTTPE-IA-DVLNQKSSHFN----TY---GGNPVA-CAVGLAVLKVIKEENLQE-NAAEVG 342 (442)
T ss_pred HHH--HHhhccCCCcceeeecCHH-HH-HHHHhcccccc----cc---CCCchh-HHHHHHHHHHHHHHhHHH-HHHHHH
Confidence 444 5688877788888877542 21 22222221211 11 233333 333347777888777776 888999
Q ss_pred HHHHHHHHh
Q 017569 350 KLSSFFVIH 358 (369)
Q Consensus 350 ~~l~~~L~~ 358 (369)
.||.++|.+
T Consensus 343 ~yl~~~l~~ 351 (442)
T KOG1404|consen 343 SYLLEKLAA 351 (442)
T ss_pred HHHHHHHHH
Confidence 999999986
No 385
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.18 E-value=0.00032 Score=66.39 Aligned_cols=174 Identities=17% Similarity=0.052 Sum_probs=91.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCC-----CCCCCeEEecCCCcchHHHHHhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK-----PYDKPNIVTGANVQVCWEKFARY 173 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~-----~~~~~~Vi~s~~~h~s~~~~~~~ 173 (369)
++++.+++++|++.+ ..++.. ..++.+..-++...+.- ...|. ...+.+.|||.|.|-.....++.
T Consensus 73 e~r~l~a~llgv~~~-----~viv~g--NSSL~lM~d~i~~a~~~--G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~ 143 (425)
T PF12897_consen 73 EARELFAELLGVPPE-----NVIVGG--NSSLNLMHDTISRAMLH--GVPGSETPWCKEEKVKFLCPVPGYDRHFAITEH 143 (425)
T ss_dssp HHHHHHHHHHTS-GG-----GEEE-S--S-HHHHHHHHHHHHHHH----TT-SS-GGGSS--EEEEEES--HHHHHHHHH
T ss_pred HHHHHHHHHhCCCHH-----HEEEec--cchHHHHHHHHHHHHhc--CCCCCCCCchhccCceEEecCCCchHHHHHHHh
Confidence 455669999999973 234333 33332322222221110 01111 12345899999999999999999
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcC--cEEE-EeeCCCCcccCCCHHHHHHHHH----HhhhccCCCceEEeecc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENT--ICVA-AILGSTLTGEFEDVKLLHDLLT----KKNEETGWDTPIHVDAA 246 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~--~~v~-~~~~~~~tG~~~~l~~I~~l~~----~~~~~~~~~~~l~vD~a 246 (369)
+|++.+.||.+++ -+|++.+++.+.+++ +.|+ +-.-+||+|..-.=+-+.+++. .. ++.++-|.|
T Consensus 144 ~Giemi~VpM~~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~------DFRI~WDNA 215 (425)
T PF12897_consen 144 FGIEMIPVPMTED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP------DFRIFWDNA 215 (425)
T ss_dssp CT-EEEEEEEETT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST------T-EEEEE-T
T ss_pred hCcEEEecCCCCC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc------CeEEEeecC
Confidence 9999999999876 689999999997654 4444 4456899999855444444443 34 899999999
Q ss_pred cccccccccCC--Ccc-ccc-------cCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 247 SGGFIAPFLYP--DLE-WDF-------RLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 247 ~~~~~~~~~~~--~~~-~~~-------~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
|....+ ... ... .++ .-+.-=.+..|+.|.-+.+.|.+++...
T Consensus 216 Y~vHhL--~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS 268 (425)
T PF12897_consen 216 YAVHHL--YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAAS 268 (425)
T ss_dssp TTT-BS--SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-
T ss_pred ceEeec--cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecC
Confidence 986554 111 110 011 0112223455788887777777777654
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.13 E-value=9.6e-05 Score=67.45 Aligned_cols=233 Identities=12% Similarity=0.035 Sum_probs=149.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH-HHHHHHHHHHHhcCCCCCCCeEEec----CCCcchHHHHHhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL-AFKRKWQQKRKEQGKPYDKPNIVTG----ANVQVCWEKFARY 173 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~-~~~~~~~~~~~~~g~~~~~~~Vi~s----~~~h~s~~~~~~~ 173 (369)
-+...++.+.|+..++ +.+.++ -.+|+..++ .+-.+... +-+|+.- ...||+++.-+++
T Consensus 115 ~il~l~~~iVGA~e~E-----vavmNs-LTvNlh~Ll~sFyKPTek----------R~KILlE~kaFPSDhYAiesQ~~l 178 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENE-----VAVMNS-LTVNLHSLLISFYKPTEK----------RFKILLEKKAFPSDHYAIESQCKL 178 (465)
T ss_pred hhhhhhhhhccCCchh-----hhhHhh-hhhHHHHHHHHhcCCcch----------hhhhhhccCCCCchHHHHHhhhhh
Confidence 4556689999998632 444444 333433333 33222111 2245432 2358889999999
Q ss_pred hccee----EEEeccCCccccCHHHHHHHHhhc---CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 174 FEVEL----KEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 174 ~G~~v----~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
-|+.+ +.|...+..-.+..+++.+.|+++ ..+|..+.....||..-|+.+|...-+.. |+++=.|-|
T Consensus 179 hG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~k------gc~VGfDLA 252 (465)
T KOG3846|consen 179 HGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFK------GCLVGFDLA 252 (465)
T ss_pred cCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCC------CcEechhhh
Confidence 89873 444444434577788888888764 35666778889999999999999666666 999999988
Q ss_pred cccccccccCCCccccccCCCCcEEEEcCccCCCCCC-CeEEEEEeCCCCcccccccccCccCCCCC-C----------c
Q 017569 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQP-T----------F 314 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y~~~~~~-~----------~ 314 (369)
++.+-.| ..+-.-++|+.++.+.|++.++. |.|.+.+..+.. ......-+.|.++..+ . +
T Consensus 253 HAvgNVp-------L~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lip 324 (465)
T KOG3846|consen 253 HAVGNVP-------LQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIP 324 (465)
T ss_pred hhhcCCc-------eEEeecCCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCc
Confidence 8765442 22223489999999999998755 446666655422 2233334567665421 0 1
Q ss_pred cccC----CcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 315 TLNF----SKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 315 ~l~~----tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.-.| ..+.....++..+|+.+..-.+.++ |..-++.|+...++.+-.
T Consensus 325 Ga~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g 377 (465)
T KOG3846|consen 325 GALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKG 377 (465)
T ss_pred cccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcc
Confidence 1112 2334456788888888888778877 888899999888876533
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.85 E-value=0.0016 Score=59.84 Aligned_cols=270 Identities=10% Similarity=0.001 Sum_probs=145.6
Q ss_pred HHHHHHHHHHhccCCCCCCCC--cchHHHHHHHHHHHHHHhCCCCCC--CCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 70 PECDKLVMASINKNYVDMDEY--PVTTELQNRCVNMIAHLFNTPVAD--DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~--~~~~~le~~~~~~la~l~g~~~~~--~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
|.+.+.=....+....+.+.- .+...+.+...+. ++|.+... ++...++-+.+||.|+..+..-+. .+..
T Consensus 51 PvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el---~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~-~~~~-- 124 (410)
T KOG1412|consen 51 PVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATEL---LLGADSPAIKEDRVFGVQSLSGTGALRIAADFLA-TFYN-- 124 (410)
T ss_pred hhhhhhhhhccCchhccchhccccCchhhhhhhHHH---hcCCCchhhhhccccceeeccccchhhhhHHHHH-Hhcc--
Confidence 555555444455444333322 3556666553322 45665321 122446777799999977654433 2221
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcce-eEEEec-cCCccccCHHHHHHHHhhcC--cEEEEe-eCCCCcccC--
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKL-EEGYYVMNPVKAVELVDENT--ICVAAI-LGSTLTGEF-- 218 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~-v~~v~~-~~~~~~~d~~~L~~~i~~~~--~~v~~~-~~~~~tG~~-- 218 (369)
+..|++|.|+|........-.|+. +...+. +.++-.+|++.+...|+..| .++++. ...||||.=
T Consensus 125 --------~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT 196 (410)
T KOG1412|consen 125 --------KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPT 196 (410)
T ss_pred --------cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCC
Confidence 347999999999988888888844 555555 33446899999999888755 233333 348999963
Q ss_pred -CCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCcccccc-CCCC-cEEEEcCccCCC-CCCCeEEEE--Ee
Q 017569 219 -EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFR-LPLV-KSINVSGHKYGL-VYAGVGWVV--WR 291 (369)
Q Consensus 219 -~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~-~~~~-Dsi~~~~hK~l~-~p~g~g~l~--~~ 291 (369)
+-+.+|+++.++. +.+...|-||-|+...-.. +.+....- ..+. =+++-|.-|.++ -....|.+. ++
T Consensus 197 ~EQW~qia~vik~k------~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~ 270 (410)
T KOG1412|consen 197 REQWKQIADVIKSK------NLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVN 270 (410)
T ss_pred HHHHHHHHHHHHhc------CceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEec
Confidence 4488899999998 9999999999887652111 11111111 1233 234445667642 233344433 44
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++.......++-.--.....+++.--|.|-....+.. -.++.--.+.++.+ |..+|...|++.|.+++
T Consensus 271 n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t-P~lre~W~~sik~MssRI~~MR~aLrd~L~aL~ 340 (410)
T KOG1412|consen 271 NPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST-PELREQWIQSIKTMSSRIKKMRTALRDHLVALK 340 (410)
T ss_pred ChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4433321111100000000111111122211111111 11222233456666 88899999999888764
No 388
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.80 E-value=0.0044 Score=65.68 Aligned_cols=90 Identities=11% Similarity=-0.020 Sum_probs=55.9
Q ss_pred HHHHHHHhh--------cCcEEEEeeC-CCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc
Q 017569 193 VKAVELVDE--------NTICVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (369)
Q Consensus 193 ~~L~~~i~~--------~~~~v~~~~~-~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (369)
+.+++.|++ +..+|++.-. ....|.+-+ ++.|.++|+++ |+++|.|+++.|+.. .....
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~------gilLI~DEV~TGfGR--tG~~f 638 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR------KIPVIFDEVFTGLWR--LGVES 638 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh------CCEEEEeecccCCCc--ccchh
Confidence 556676652 2344444432 344466532 89999999999 999999999887643 11111
Q ss_pred cccccCCCCcEEEEcCccCCCCCC-CeEEEEEeC
Q 017569 260 EWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRT 292 (369)
Q Consensus 260 ~~~~~~~~~Dsi~~~~hK~l~~p~-g~g~l~~~~ 292 (369)
..+..-...|.++ ..|.+.+.+ ..|.+++++
T Consensus 639 a~e~~gv~PDIi~--~gKgLtgG~~Plaa~l~~~ 670 (817)
T PLN02974 639 AWELLGCKPDIAC--YAKLLTGGLVPLAATLATE 670 (817)
T ss_pred hHHhcCCCCCEEe--ecccccCCCCccEEEEEcH
Confidence 1111111367777 568887773 678888764
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.72 E-value=0.0028 Score=57.50 Aligned_cols=269 Identities=17% Similarity=0.054 Sum_probs=155.9
Q ss_pred ccccccccCCChHHHHHHHHHHhccCCCCCC---C---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 58 LNLASFVTTWMEPECDKLVMASINKNYVDMD---E---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 58 ~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~---~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
.||+.+-..-+++.+.++-.+.+|-|..... . +.....+.+.....+.+|++.|.+ +.+++..||...-+
T Consensus 9 vnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn----~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 9 VNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDN----YKVLFLQGGGTGQF 84 (370)
T ss_pred eecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCc----eeEEEEeCCCcccc
Confidence 3544433333445666776677775543321 1 234567777888899999999964 45666665544443
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe-ccCCc--cccCHHHHHHHHhhcCcEEEE
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK-LEEGY--YVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~-~~~~~--~~~d~~~L~~~i~~~~~~v~~ 208 (369)
.|+..-+..+ ..|. ..+-|++..=+--+++++-++ |...+.++ ..+.. -.+|.+.++ .+++..+|+.
T Consensus 85 aAv~lNL~gl-----K~g~--~AdYiVTGsWS~KA~~EAkk~-~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyy 154 (370)
T KOG2790|consen 85 AAVPLNLIGL-----KHGR--CADYVVTGSWSAKAAEEAKKY-GTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYY 154 (370)
T ss_pred cccchhhhcc-----ccCC--ccceEEeccccHHHHHHHHhh-CCceEEeccccccccCcCCChhhcc--cCCCccEEEE
Confidence 4332211100 0111 123566655555566666555 44433333 33221 235655554 3455678999
Q ss_pred eeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEE
Q 017569 209 ILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (369)
Q Consensus 209 ~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~ 287 (369)
+...|..|.- +++. +-.-. +..++.|-.... ++. ++|+. ..+.+....+|.. +|.|..+
T Consensus 155 CaNETVHGVEf~~~P----~~~~~------~~vlVaDmSSnf-----lSr--pvDvs--k~gvi~aGAQKN~-G~aG~Tv 214 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP----VNDPK------GAVLVADMSSNF-----LSR--PVDVS--KFGVIFAGAQKNV-GPAGVTV 214 (370)
T ss_pred ecCceeeceecCCCC----CCCCC------CceEEEecccch-----hcC--Cccch--hcceEEecccccc-CccccEE
Confidence 9999998874 3332 11123 888899975443 221 34544 4567788899998 7999999
Q ss_pred EEEeCCCCccccccccc---CccCCCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhc-C
Q 017569 288 VVWRTKDDLPDELVFHI---NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHS-S 360 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~---~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~-g 360 (369)
+++|+. ++.......+ +|.... .+-.+=.|.+...+..+...++.+-.. |+..+ ...+-++.+++.+.++ |
T Consensus 215 vivr~d-llg~~~~~tP~v~dyk~~~-~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~g 292 (370)
T KOG2790|consen 215 VIVRKD-LLGNALDITPSVLDYKIMD-KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNG 292 (370)
T ss_pred EEEehh-hhcccccCCccccceeeec-cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999864 3322222222 222111 122333577777677777888887554 67777 7889999999999987 5
Q ss_pred CC
Q 017569 361 YF 362 (369)
Q Consensus 361 ~~ 362 (369)
|+
T Consensus 293 fy 294 (370)
T KOG2790|consen 293 FY 294 (370)
T ss_pred eE
Confidence 44
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.64 E-value=0.00082 Score=67.10 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=143.7
Q ss_pred CCCCCHHHHHHHHHHhhhhcCCCC--ccccccccCCChHHH-HHHHHHHhccCC-CCCCCC-----cchHHHHHHHHHHH
Q 017569 34 DNSMPKEAAYQVINDELMLDGNPR--LNLASFVTTWMEPEC-DKLVMASINKNY-VDMDEY-----PVTTELQNRCVNMI 104 (369)
Q Consensus 34 ~~~~~~~~i~~~l~~~~~~~~~p~--~~l~~~~~~~~~~~v-~~~~~~~~~~n~-~~~~~~-----~~~~~le~~~~~~l 104 (369)
..+..+.++++.++++-..+.-.+ +.+ +|-.+..|+.+ +.++. |..| .+|+++ ++--|-.-..+.++
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGm-GYyn~~vP~~I~RNile---np~W~TqYTPYQ~EIsQGRLEsllNyQTmi 172 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGM-GYYNTHVPAVILRNILE---NPGWYTQYTPYQAEISQGRLESLLNYQTMI 172 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhcc-ccccccCcHHHHHHhhh---CCcceeccCCCchhhhhhhHHHHhhhHHhh
Confidence 467788999999988765443222 122 22233334433 22221 1111 223333 23222222345678
Q ss_pred HHHhCCCCCCCCCCCeEEeCCch---HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh----hcce
Q 017569 105 AHLFNTPVADDKTAVGVGTVGSS---EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----FEVE 177 (369)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt---~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~----~G~~ 177 (369)
+++.|.+-.+ ....--|| ||+.++.+.-+ +.+.++....|+-....++. +|++
T Consensus 173 ~dlTGL~~aN-----ASLLDEgTAaaEAm~l~~~~~k---------------rkk~vvd~~~hpqtlsV~~TRa~~~~i~ 232 (1001)
T KOG2040|consen 173 TDLTGLPMAN-----ASLLDEGTAAAEAMALCNRINK---------------RKKFVVDSNCHPQTLSVVKTRAKGFGIK 232 (1001)
T ss_pred hhccCCcccc-----hhhhccchhHHHHHHHHHhhcc---------------cceEEecCCCCcchhhhhhcccccccee
Confidence 9999998632 23333333 34433322221 23588888889876665543 3444
Q ss_pred eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC
Q 017569 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (369)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (369)
+...+.. +.. ...++...+++.+|.+. |.+.|+.++++.++.. +..+++-- -...+..+.|
T Consensus 233 v~~~~~~---------~~~-~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~------~s~vv~at--DLLaLtiLrp 293 (1001)
T KOG2040|consen 233 VVVSDIK---------EAD-YSSKDVSGVLVQYPDTE-GSVLDFDELVELAHAN------GSLVVMAT--DLLALTILRP 293 (1001)
T ss_pred EEecCHH---------Hhh-ccccceeEEEEEcCCCC-CcccCHHHHHHHhhcc------CceEEEee--hhhHHHccCC
Confidence 3222221 111 12234677889999888 9999999999999998 76655422 1111222333
Q ss_pred CccccccCCCCcEEEEcCccCCCCCCC-----eEEEEEeCC--CCcccccc-cccCccCCC---------C----CCc--
Q 017569 258 DLEWDFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTK--DDLPDELV-FHINYLGSD---------Q----PTF-- 314 (369)
Q Consensus 258 ~~~~~~~~~~~Dsi~~~~hK~l~~p~g-----~g~l~~~~~--~~~~~~~~-~~~~y~~~~---------~----~~~-- 314 (369)
+-. .|+|....+++.++ +|.| .|++.+++. ..++..+. ...+-.+.. + .+.
T Consensus 294 --Pge---fGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKAT 367 (1001)
T KOG2040|consen 294 --PGE---FGADIAVGSSQRFG-VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKAT 367 (1001)
T ss_pred --hhh---cCceeeeccccccC-ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccc
Confidence 222 38999999999885 4543 344444321 00110100 000111110 0 000
Q ss_pred cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 315 TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 315 ~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.--||-.+..+--..+.-.+.|.+|++++ |....+-+|+..|+..|
T Consensus 368 SNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag 415 (1001)
T KOG2040|consen 368 SNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG 415 (1001)
T ss_pred hhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 00144433211111223345699999999 89999999999998765
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.63 E-value=0.0014 Score=60.98 Aligned_cols=287 Identities=14% Similarity=0.062 Sum_probs=152.2
Q ss_pred HhhhhcCCCC-ccccccccC--CC----hHHHHHHHHHHhccCCC-CCCCCcchHHHHHHHHHHHHHHhCCCCCC--CCC
Q 017569 48 DELMLDGNPR-LNLASFVTT--WM----EPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVAD--DKT 117 (369)
Q Consensus 48 ~~~~~~~~p~-~~l~~~~~~--~~----~~~v~~~~~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~--~~~ 117 (369)
+.+..+.+|. +||+.+... .. -+.|+++=....+.+.. .|..-.+..++.+...+. .+|.+.+. +..
T Consensus 44 eAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakL---a~G~~s~~ik~~R 120 (427)
T KOG1411|consen 44 EAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKL---ALGDNSPVIKEKR 120 (427)
T ss_pred HHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHH---hhcCCchhhhccc
Confidence 3455666666 676554322 11 25555554433332211 122233666666553221 35554321 111
Q ss_pred CCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHH
Q 017569 118 AVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAV 196 (369)
Q Consensus 118 ~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~ 196 (369)
...+=|-+||.|+-.+..-+ .++. ....|++|.|+|--..+.-...|+.+..... ++.+..+|.+.+.
T Consensus 121 i~tvQ~lSGTGaLriga~Fl-~~f~----------~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~l 189 (427)
T KOG1411|consen 121 IVTVQTLSGTGALRVGAEFL-ARFY----------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGML 189 (427)
T ss_pred eeEEEeccCcchhhHHHHHH-Hhhc----------cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHH
Confidence 22334457777775543333 2221 1348999999998777777888999877776 4455788988887
Q ss_pred HHHhhcC---cEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc----CC
Q 017569 197 ELVDENT---ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LP 266 (369)
Q Consensus 197 ~~i~~~~---~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~----~~ 266 (369)
+.+.+.| .++.-....||||.= +.+++|.++.++. +..-+.|.||-++...-+..+ ...++ ..
T Consensus 190 edl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k------~~~pffDmAYQGfaSG~~d~D-A~avR~F~~~g 262 (427)
T KOG1411|consen 190 EDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK------NLLPFFDMAYQGFASGDLDKD-AQAVRLFVEDG 262 (427)
T ss_pred HHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc------cccchhhhhhcccccCCchhh-HHHHHHHHHcC
Confidence 7777643 344445578999863 5688999999999 999999999988766311111 11111 11
Q ss_pred CCcEEEEcCccCCCC-CCCeEEE--EEeCCCCcccc-----cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh
Q 017569 267 LVKSINVSGHKYGLV-YAGVGWV--VWRTKDDLPDE-----LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (369)
Q Consensus 267 ~~Dsi~~~~hK~l~~-p~g~g~l--~~~~~~~~~~~-----~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~ 338 (369)
+=-.++-|.-|.|+- ....|.+ ++++.+...+. ....+-| +++-+.|.|-...+++- ..|+..-..
T Consensus 263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmY-----SnPP~hGArIv~~Il~d-~~l~~~W~~ 336 (427)
T KOG1411|consen 263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMY-----SNPPLHGARIVATILSD-PDLKNQWLG 336 (427)
T ss_pred CceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccc-----cCCCccchhhhhhccCC-hHHHHHHHH
Confidence 122334445566421 2233333 23433221111 0012233 23334455533322222 222222222
Q ss_pred hHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 339 VIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 339 G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+..+ |.+.+-+.|.+.|++.|-
T Consensus 337 evk~MadRi~~mR~~L~d~L~~~gs 361 (427)
T KOG1411|consen 337 EVKGMADRIISMRQQLFDALEKEGS 361 (427)
T ss_pred HHHHHHHhhhhhHHHHhHHhhcCCC
Confidence 33334 888888888888887664
No 392
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.0026 Score=60.21 Aligned_cols=191 Identities=16% Similarity=0.047 Sum_probs=117.2
Q ss_pred cCCCCcccccc--ccCCChHHHHHHHHHHhccCC-------CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe
Q 017569 53 DGNPRLNLASF--VTTWMEPECDKLVMASINKNY-------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT 123 (369)
Q Consensus 53 ~~~p~~~l~~~--~~~~~~~~v~~~~~~~~~~n~-------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t 123 (369)
+|++.+|++++ ..-...+.+.+.....+.+.. +.|+.-...-.+|++ +++++|++. .++-
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~----iakF~G~E~-------aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKR----IAKFMGTED-------AIVY 160 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHH----HHHhhCCcc-------eeee
Confidence 56666665542 221223445555555544321 112222222345555 999999985 3444
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc-
Q 017569 124 VGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN- 202 (369)
Q Consensus 124 ~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~- 202 (369)
+-|=.++..++-++..+ ++.+++-+..+..+.+.+++..-.+.+..-+ |.++|+..+.+.
T Consensus 161 s~gF~ti~S~ipafsKr-------------GDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn------dm~~lerll~E~~ 221 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKR-------------GDIIFVDEAVNFAIQKGLQLSRSTISYFKHN------DMEDLERLLPEQE 221 (467)
T ss_pred ccccchhhhcchhhhcc-------------CcEEEEehhhhHHHHHHHhhhhheeEEecCC------CHHHHHHhccCcc
Confidence 44444455566666543 5788888888888888877765555555433 456666554331
Q ss_pred ------------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc--cccccCCCC
Q 017569 203 ------------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL--EWDFRLPLV 268 (369)
Q Consensus 203 ------------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~ 268 (369)
.+.|++..---++|.+.|+.+|.++..+| ...+++|..++.+.+.-..... .+......+
T Consensus 222 ~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky------k~RvildEs~SfG~lg~~GrGvteH~~v~~~~i 295 (467)
T KOG1358|consen 222 DEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY------KFRVILDESLSFGVLGKTGRGVTEHFGVPITDI 295 (467)
T ss_pred hhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhh------eEEEEEecccccccccccCccccccCCCCccce
Confidence 24677777888999999999999999999 9999999998776652111000 123334568
Q ss_pred cEEEEcCccCC
Q 017569 269 KSINVSGHKYG 279 (369)
Q Consensus 269 Dsi~~~~hK~l 279 (369)
|.++.+..-.+
T Consensus 296 Div~~sm~~al 306 (467)
T KOG1358|consen 296 DIVTASMETAL 306 (467)
T ss_pred eeeeecccccc
Confidence 88887765554
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.08 E-value=0.0053 Score=51.67 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=51.0
Q ss_pred CCCCcchHHHHHHHHHHHHHHhC--CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 017569 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (369)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h 164 (369)
|..+.+..+|++++++|+.+.+| .+.+ ...+++|+|++.|+..++.++.++ ++.|+++.|.|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~---pd~Ivvt~Ga~~al~~l~~~l~dp-------------GD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD---ADMIVLSAGATAANEIIMFCIADP-------------GDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc---hhheEEcCCHHHHHHHHHHHHcCC-------------CCEEEEeCCCC
Confidence 44566899999999999999988 3332 135999999999999998888663 57899999987
Q ss_pred c
Q 017569 165 V 165 (369)
Q Consensus 165 ~ 165 (369)
+
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 5
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.52 E-value=0.012 Score=55.22 Aligned_cols=170 Identities=14% Similarity=0.139 Sum_probs=91.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCCcchHH
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWE 168 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~Vi~s~~~h~s~~ 168 (369)
+....+||+.+++ |-++.|--.. +...+++.+|+|+-+..++.++.... .....| .|+.+.|.|++|.
T Consensus 42 ~f~s~eL~~~Ir~-LH~~VGNAvt--~gr~IV~GtGsTQL~~AalyALSp~~--------~~~~~p~~VVa~aPYY~~Y~ 110 (363)
T PF04864_consen 42 WFISPELERQIRR-LHRVVGNAVT--DGRYIVFGTGSTQLFNAALYALSPNA--------SPSSSPASVVAAAPYYSSYP 110 (363)
T ss_dssp TTS-HHHHHHHHH-HHHHH-SB----TTSEEEEECHHHHHHHHHHHHHCHHT---------TTSSSEEEEE-SS--CHHH
T ss_pred eeccHHHHHHHHH-HHHHhccccc--cCcEEEEcCCHHHHHHHHHHhcCCCC--------CCCCCCceeEecCCCccchH
Confidence 3456788877665 5555664432 23568999999999988888875430 111234 7999999999999
Q ss_pred HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
...+++.-..-...=|...+. + .-+..+.+=++|+||||.|.+.. .+++.. +..+|.|-||-
T Consensus 111 ~qt~~f~s~~y~w~Gda~~~~-~------~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~------~~k~I~D~AYY 172 (363)
T PF04864_consen 111 EQTDFFDSRLYKWAGDASNFK-N------SDNPSPYIELVTSPNNPDGQLRE-----AVLNGS------SGKVIHDLAYY 172 (363)
T ss_dssp HHCCCT-BTTEEEEEECCCGT-T-------S-CCGEEEEEESS-TTT-----------SSTTT------EEEEEEE-TT-
T ss_pred HHHHhccccCccccccHHhhc-c------CCCCCCeEEEEeCCCCCcccccc-----hhcCCC------Ccceeeeeeee
Confidence 888876544322322322232 1 11123556688999999998731 123444 67789999998
Q ss_pred cccccccCCCccccccCCCCcEEEEcCccC-CCCCCCeEEEEEeCCCC
Q 017569 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~-l~~p~g~g~l~~~~~~~ 295 (369)
+..+ .|- .-. ..=|.+-+...|. +.++...||.++||++.
T Consensus 173 WPhy---TpI---~~~-aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~V 213 (363)
T PF04864_consen 173 WPHY---TPI---TAP-ADHDIMLFTLSKLTGHAGSRFGWALVKDEEV 213 (363)
T ss_dssp STTT---S------S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHH
T ss_pred cccc---ccc---CCC-CCCceEEEEEecccCccccccceeeecCHHH
Confidence 7544 221 111 1236677776676 66677889999998643
No 395
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=95.60 E-value=0.32 Score=44.83 Aligned_cols=209 Identities=10% Similarity=-0.051 Sum_probs=103.2
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh------cce------eEEEeccC-
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF------EVE------LKEVKLEE- 185 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~------G~~------v~~v~~~~- 185 (369)
...|+++|+|||-+|++.+|+... ..+.|.+....|--+...++.- |-+ |...|+.+
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk----------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDv 173 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK----------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDV 173 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc----------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccc
Confidence 479999999999999999988521 2234433333332222222211 111 22233311
Q ss_pred --Ccc-----------ccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEE
Q 017569 186 --GYY-----------VMNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 186 --~~~-----------~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
..+ ..=.+.+++.+++ ...+.+..+-.+=-|.+-| ++++++..+.. |-.++
T Consensus 174 yrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a------GGv~I 247 (452)
T KOG1403|consen 174 YRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA------GGVCI 247 (452)
T ss_pred cccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC------CCeEE
Confidence 001 1112334444432 1223333333344455533 67788888888 89999
Q ss_pred eecccccccccccC-CCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-ccCccCCCCCCccccCCc
Q 017569 243 VDAASGGFIAPFLY-PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSK 320 (369)
Q Consensus 243 vD~a~~~~~~~~~~-~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr 320 (369)
.|+++-|+-. +. ..+.+...-.-.|.++ ..|=++.....+.+..+++ . .+++.. ...|... + |..
T Consensus 248 aDEVQvGFGR--vG~hyWafq~y~fiPDIVt--mgKpmGNGhPVa~Vattke-I-A~Af~atgv~YFNT----y---GGn 314 (452)
T KOG1403|consen 248 ADEVQVGFGR--VGSHYWAFQTYNFIPDIVT--MGKPMGNGHPVAAVATTKE-I-AQAFHATGVEYFNT----Y---GGN 314 (452)
T ss_pred eehhhhcccc--cchhhhhhhhhccccchhe--ecccCCCCCeeeEEeccHH-H-HHHhccccceehhc----c---CCC
Confidence 9999876543 11 1112222112345555 4565555555666665432 2 233322 2344322 1 222
Q ss_pred chhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 321 GSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 321 ~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+..- +...+.|+....|.+++ +..++-.+|.+.|+.
T Consensus 315 PVsC-Av~laVm~v~e~E~Lq~-ha~~vG~~L~~lL~~ 350 (452)
T KOG1403|consen 315 PVSC-AVGLAVMRVCEDENLQE-HAQQVGEKLEVLLRR 350 (452)
T ss_pred chhH-HHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHH
Confidence 2222 22235566666666655 666666777777664
No 396
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=82.42 E-value=15 Score=35.08 Aligned_cols=141 Identities=14% Similarity=0.092 Sum_probs=74.3
Q ss_pred CHHHHHHHHhh-----cCc-EEEEee----CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccc--ccCCC
Q 017569 191 NPVKAVELVDE-----NTI-CVAAIL----GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP--FLYPD 258 (369)
Q Consensus 191 d~~~L~~~i~~-----~~~-~v~~~~----~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~--~~~~~ 258 (369)
.++++|+.|.+ +|. .+++.- |.-..++.+-+..+.+++++| ++.++||+++.|+-.. |...+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh------~v~fivDEVQTGgGaTGk~WaHe 327 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------GVAFIVDEVQTGGGATGKFWAHE 327 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc------CeEEEeeeeecCCCccCceeeeh
Confidence 35667777754 233 333332 222334557799999999999 9999999998665441 22211
Q ss_pred ccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh
Q 017569 259 LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (369)
Q Consensus 259 ~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~ 338 (369)
.+++ ..-.|.+|+| .|+.. .| + +.+.++.+ +.+|--. + |+.| .++. .+-+-..++.+..+
T Consensus 328 -hw~l-~~PpD~vTFS-KK~q~----gG-f-fh~~~frp-----n~pYrif---N-TWmG-dP~k-~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 328 -HWNL-DSPPDVVTFS-KKFQT----GG-F-FHDEEFRP-----NEPYRIF---N-TWMG-DPSK-NLLLEEVVQEIKRE 387 (484)
T ss_pred -hcCC-CCCccceehh-hhhhc----Cc-c-ccCcccCC-----CchHHHh---h-hhcC-ChHH-HHHHHHHHHHHhHH
Confidence 1222 2357888865 45542 23 2 33333332 2223211 1 1112 2232 44455666666655
Q ss_pred hHHHHHhhHHHHHHHHHHHh
Q 017569 339 VIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 339 G~~~~~~~~~a~~l~~~L~~ 358 (369)
++-+ ++...-++|...|.+
T Consensus 388 ~Ll~-n~~~vG~~l~~gL~~ 406 (484)
T KOG1405|consen 388 DLLN-NVAHVGKALLKGLLE 406 (484)
T ss_pred HHHH-HHHHHHHHHHHHHHH
Confidence 5433 555556666666654
No 397
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=70.36 E-value=26 Score=33.00 Aligned_cols=54 Identities=11% Similarity=0.162 Sum_probs=41.0
Q ss_pred ccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 187 YYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 187 ~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
...++.+++++.++. ...-+++.+|+-|.|.. +...+|.++|++. ++.+++|..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~------g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQ------GAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCeEEEECC
Confidence 356777777776553 12234667899998987 6689999999999 999999964
No 398
>PLN02672 methionine S-methyltransferase
Probab=69.48 E-value=1e+02 Score=34.30 Aligned_cols=149 Identities=9% Similarity=-0.002 Sum_probs=88.2
Q ss_pred HHHHHHHhccCCCCCCCC-cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC
Q 017569 73 DKLVMASINKNYVDMDEY-PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP 151 (369)
Q Consensus 73 ~~~~~~~~~~n~~~~~~~-~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~ 151 (369)
...+.+.+..+...|... .|...+++-+...+..+.+.+-.. .++++.++-..|+-.+++....++.--
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 476 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP---DNVVVFPSRAVAIENALRLFSPRLAIV------- 476 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc---cceEEeccHHHHHHHHHHhhChHHHhh-------
Confidence 445566777766555444 478899999999999999998643 457777787778767766653321100
Q ss_pred CCCCeEEecCCCcchHHHHHhhhcc--------eeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHH
Q 017569 152 YDKPNIVTGANVQVCWEKFARYFEV--------ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 152 ~~~~~Vi~s~~~h~s~~~~~~~~G~--------~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 222 (369)
++- .+..-+..|..+....|. .+..+.-.. +- +.+.+.|++ +|.+|+.......--+..-++
T Consensus 477 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (1082)
T PLN02672 477 ---DEH-LTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR---QS--DLVIELIKKLKPQVVVTGMADFEMRTSTAFE 547 (1082)
T ss_pred ---hhh-hhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC---cc--hHHHHHHHhCCCeEEEEeccchhhhhHHHHH
Confidence 000 122223344444444431 222222111 12 245566655 677776555544433345688
Q ss_pred HHHHHHHHhhhccCCCceEEeecc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
.|.+.+++. |.|++.|..
T Consensus 548 ~~~~~~~~~------~~~~~~~~~ 565 (1082)
T PLN02672 548 HLLNVTAEI------GARLFLDIS 565 (1082)
T ss_pred HHHHHHHhh------CcEEEEehh
Confidence 899999999 999999964
No 399
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=66.82 E-value=98 Score=29.07 Aligned_cols=101 Identities=13% Similarity=0.022 Sum_probs=60.6
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC--cc--hHHHHHhhhcceeEEEeccCCcc--ccCHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV--QV--CWEKFARYFEVELKEVKLEEGYY--VMNPV 193 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~--h~--s~~~~~~~~G~~v~~v~~~~~~~--~~d~~ 193 (369)
..+|.||..+|..-..++..+. -|. +.+.++-... +. ......+.+|.+++.++-..+ . ....+
T Consensus 66 TlvT~GgiQSNh~r~tAavA~~------lGl---~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d-~~~~~~~~ 135 (323)
T COG2515 66 TLVTYGGIQSNHVRQTAAVAAK------LGL---KCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTD-IGINASAE 135 (323)
T ss_pred EEEEecccchhHHHHHHHHHHh------cCC---cEEEEEeccccccccccchhhhhhcCceEEEecCCCC-hhhchhhH
Confidence 7999999999987655554331 121 1233332222 11 123344678999998886543 4 34456
Q ss_pred HHHHHHhhc--CcEEEEeeCCCCcccC---CCHHHHHHHHHH
Q 017569 194 KAVELVDEN--TICVAAILGSTLTGEF---EDVKLLHDLLTK 230 (369)
Q Consensus 194 ~L~~~i~~~--~~~v~~~~~~~~tG~~---~~l~~I~~l~~~ 230 (369)
++.+.++++ ..+|+..-+++|.|.. .-..||.+-+++
T Consensus 136 ~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 136 ELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 666666653 4577777778886655 556666666665
No 400
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=56.57 E-value=18 Score=30.80 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=39.4
Q ss_pred CHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
|..+++++++....++++.. |.+..++++.+.++..++ .+++|+|-..|.
T Consensus 12 ~~~~le~~les~~~~vflL~-----~~i~~ik~ivk~lK~~gK----~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQYVFLLT-----GHILNIKEIVKKLKNRGK----TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCeEEEEEe-----chhhhHHHHHHHHHhCCc----EEEEEeHHhccc
Confidence 45788889988887777654 456699999999998844 689999987764
No 401
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=53.65 E-value=1e+02 Score=28.69 Aligned_cols=79 Identities=8% Similarity=-0.065 Sum_probs=50.9
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhc
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~ 234 (369)
+.|++.+.-+. .+....++.+...+.+.+.++.-..+.+.+.+.+...+++++-.-+| +..||...+.+.|++.
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGdP-~I~dpg~~Lv~~~~~~--- 112 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTP-LINDPGYHLVRTCREA--- 112 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCCC-ceeCCHHHHHHHHHHC---
Confidence 56777665544 34666777776666765433434445566666665555666534466 6779999999999988
Q ss_pred cCCCceEE
Q 017569 235 TGWDTPIH 242 (369)
Q Consensus 235 ~~~~~~l~ 242 (369)
++.+.
T Consensus 113 ---gi~v~ 117 (287)
T PRK14994 113 ---GIRVV 117 (287)
T ss_pred ---CCCEE
Confidence 76554
No 402
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=52.39 E-value=46 Score=31.17 Aligned_cols=78 Identities=21% Similarity=0.049 Sum_probs=49.8
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~ 198 (369)
.++=.++|..++-+|+.+...- -+-.+++|+..-.-..+.++.+|++++.+|-.+.+..=-.+.+++.
T Consensus 64 tIVE~TSGNTGI~LA~vaa~~G------------y~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el 131 (300)
T COG0031 64 TIVEATSGNTGIALAMVAAAKG------------YRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKEL 131 (300)
T ss_pred EEEEcCCChHHHHHHHHHHHcC------------CcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHH
Confidence 3666778888888888776442 1346777887766777888999999999987432111122334444
Q ss_pred HhhcCc-EEEE
Q 017569 199 VDENTI-CVAA 208 (369)
Q Consensus 199 i~~~~~-~v~~ 208 (369)
..+.+- ++..
T Consensus 132 ~~~~p~~~~~~ 142 (300)
T COG0031 132 AAEIPGYAVWL 142 (300)
T ss_pred HHhCCCceEch
Confidence 455544 5554
No 403
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=50.98 E-value=68 Score=28.45 Aligned_cols=65 Identities=6% Similarity=-0.032 Sum_probs=43.0
Q ss_pred HHHHHhhhcceeEEE-eccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 167 WEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
+.++++.+|..+..+ +...+ ..--.+.++.++.+++..|++...... ....+.+-|++. +++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d-~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~------gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQND-PEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAA------GIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTT-HHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHT------TSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCC-HHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhc------CceEEE
Confidence 456677789998886 44433 344557778888888888775544433 345566668888 887764
No 404
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=49.80 E-value=28 Score=30.31 Aligned_cols=35 Identities=14% Similarity=0.022 Sum_probs=29.4
Q ss_pred cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
.+|+++=|+|..|.++|.+.-++++++. ++.+|.=
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~------gV~iytI 148 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREP------NVNAFVI 148 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhC------CCEEEEE
Confidence 5677888999999999998778999999 8887753
No 405
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=49.79 E-value=1.1e+02 Score=29.58 Aligned_cols=82 Identities=20% Similarity=0.056 Sum_probs=48.9
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.+..++|..+..+|..+... | -+..|++|+..-..-...++.+|++++.++...+ ..-..+..++..
T Consensus 114 vV~aSsGN~G~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~-~~~~~~~a~~l~ 180 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAMK---------G---YKMILTMPSYTSLERRVTMRAFGAELVLTDPTKG-MGGTVKKAYELL 180 (368)
T ss_pred EEEeCCchHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCC-ccHHHHHHHHHH
Confidence 56677888888777766433 1 1347888887666677788899999988864221 111233444444
Q ss_pred hhcCcEEEEeeCCCC
Q 017569 200 DENTICVAAILGSTL 214 (369)
Q Consensus 200 ~~~~~~v~~~~~~~~ 214 (369)
++++-.+++...+|+
T Consensus 181 ~~~~~~~~~~q~~np 195 (368)
T PLN02556 181 ESTPDAFMLQQFSNP 195 (368)
T ss_pred HhcCCCCccCCCCCH
Confidence 444444444434444
No 406
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=48.27 E-value=1e+02 Score=23.87 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=43.5
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
+...++..|.++..++.+. +.+++.+.+. .++.+|.++...++ ......++++..|+.+. ++.+++-|
T Consensus 20 la~~l~~~G~~v~~~d~~~-----~~~~l~~~~~~~~pd~V~iS~~~~~--~~~~~~~l~~~~k~~~p----~~~iv~GG 88 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDANV-----PPEELVEALRAERPDVVGISVSMTP--NLPEAKRLARAIKERNP----NIPIVVGG 88 (121)
T ss_dssp HHHHHHHTTBEEEEEESSB------HHHHHHHHHHTTCSEEEEEESSST--HHHHHHHHHHHHHTTCT----TSEEEEEE
T ss_pred HHHHHHHCCCeEEEECCCC-----CHHHHHHHHhcCCCcEEEEEccCcC--cHHHHHHHHHHHHhcCC----CCEEEEEC
Confidence 4445556688888886543 3477777665 46778777654333 33445666666555422 78888877
Q ss_pred ccc
Q 017569 246 ASG 248 (369)
Q Consensus 246 a~~ 248 (369)
.+.
T Consensus 89 ~~~ 91 (121)
T PF02310_consen 89 PHA 91 (121)
T ss_dssp SSS
T ss_pred Cch
Confidence 653
No 407
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=48.26 E-value=78 Score=31.96 Aligned_cols=69 Identities=9% Similarity=-0.142 Sum_probs=46.0
Q ss_pred Hhhhc-ceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 171 ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 171 ~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
++..| .+|+.++... ..++.+++.+.+.+ +|.+|.++.- |.......++++.+|+... ++.+++-|.+.
T Consensus 32 L~~~G~~~V~iiD~~~--~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P----~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT--GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLP----NAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEecccc--cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCC----CCEEEEcCCCc
Confidence 34557 5788887653 46677888887765 6777776542 3344556677777776522 78888877654
No 408
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=48.07 E-value=22 Score=28.72 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=25.5
Q ss_pred ccCHHHH----HHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 189 VMNPVKA----VELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 189 ~~d~~~L----~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
.++.+.- ++.+..++.+|+++.+.. +-+++.++|+++ ++++..
T Consensus 64 ~l~~~~r~~~l~~l~~~~~P~iIvt~~~~------~p~~l~e~a~~~------~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYNPPCIIVTRGLE------PPPELIELAEKY------NIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHHC------T--EEE
T ss_pred HCCHHHHHHHHHHHhCCCCCEEEEECcCC------CCHHHHHHHHHh------CCcEEE
Confidence 4455444 444445788999888873 588999999999 888764
No 409
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=46.65 E-value=63 Score=30.56 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=52.5
Q ss_pred cCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee--cccccccccccCCCcccc
Q 017569 190 MNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD--AASGGFIAPFLYPDLEWD 262 (369)
Q Consensus 190 ~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD--~a~~~~~~~~~~~~~~~~ 262 (369)
++.+.+++.++. +.+.|++ --++|-|.+..-+.|++..++..++. .+++.++ +|.||+++
T Consensus 80 ~~~~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~--PV~v~v~~~AASGGY~I---------- 146 (317)
T COG0616 80 IGGDDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKK--PVVVSVGGYAASGGYYI---------- 146 (317)
T ss_pred ccHHHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcC--CEEEEECCeecchhhhh----------
Confidence 345555554442 2344443 34678899988888888887774321 4777777 45666554
Q ss_pred ccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 263 FRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 263 ~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
...+|-|..+++-+.+ +.|++..
T Consensus 147 --A~aAd~I~a~p~si~G---SIGVi~~ 169 (317)
T COG0616 147 --ALAADKIVADPSSITG---SIGVISG 169 (317)
T ss_pred --hccCCEEEecCCceee---eceeEEe
Confidence 2368888988888873 3456654
No 410
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=45.65 E-value=16 Score=37.81 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=34.2
Q ss_pred EEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccc
Q 017569 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (369)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~ 250 (369)
..=+|++..|..++++++++-|++. ||-|++|-+++-+
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~------GIgViLD~V~~HF 239 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQA------GIGVILDWVPNHF 239 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHc------CCEEEEEecCCcC
Confidence 3447999999999999999999999 9999999998863
No 411
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=43.82 E-value=52 Score=25.84 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=35.2
Q ss_pred ccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 187 YYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 187 ~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
+.++++++|++.+.++|-.|+ .|+--+|.+.-.++..+++++.
T Consensus 46 SHkl~~eEle~~lee~~E~iv--vGTG~~G~l~l~~ea~e~~r~k 88 (121)
T COG1504 46 SHKLALEELEELLEEGPEVIV--VGTGQSGMLELSEEAREFFRKK 88 (121)
T ss_pred ccccCHHHHHHHHhcCCcEEE--EecCceeEEEeCHHHHHHHHhc
Confidence 478999999999999886555 3666778887788888889888
No 412
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=43.20 E-value=1e+02 Score=25.55 Aligned_cols=55 Identities=9% Similarity=-0.076 Sum_probs=35.7
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCCHHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
+.+...++..|+++....+-+| |.+++++++.+ +..+|+ +.|.+..|..|-+.+.
T Consensus 23 ~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~~~DlVi-ttGG~s~g~~D~t~~a 82 (152)
T cd00886 23 PALVELLEEAGHEVVAYEIVPD----DKDEIREALIEWADEDGVDLIL-TTGGTGLAPRDVTPEA 82 (152)
T ss_pred HHHHHHHHHcCCeeeeEEEcCC----CHHHHHHHHHHHHhcCCCCEEE-ECCCcCCCCCcCcHHH
Confidence 3566677888999888877555 46666666553 345555 4465666888775543
No 413
>PLN03013 cysteine synthase
Probab=42.22 E-value=89 Score=30.96 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=39.8
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..++-+|..+... | -+..|++|+.....-...++.+|++++.++-+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---------G---~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---------G---YRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 56677888888887766543 1 13478889888777888899999999888643
No 414
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=41.90 E-value=1.7e+02 Score=22.98 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=46.3
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC--CCcccCCCHHHHHHHHHHhh
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS--TLTGEFEDVKLLHDLLTKKN 232 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~--~~tG~~~~l~~I~~l~~~~~ 232 (369)
-.++.+..+...+.. ..|+.+..|++.+..+. .++.+.|.....-++++.++ ...+...|-..|.+.|-++
T Consensus 28 f~i~AT~gTa~~L~~---~~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~- 100 (115)
T cd01422 28 HRLVATGTTGLLIQE---ATGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVY- 100 (115)
T ss_pred CEEEEechHHHHHHH---hhCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHc-
Confidence 455555544333222 15888877765322233 44666676666556666665 3333256788999999999
Q ss_pred hccCCCceEEe
Q 017569 233 EETGWDTPIHV 243 (369)
Q Consensus 233 ~~~~~~~~l~v 243 (369)
++++..
T Consensus 101 -----~Ip~~T 106 (115)
T cd01422 101 -----NIPLAT 106 (115)
T ss_pred -----CCCEEE
Confidence 887763
No 415
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=40.79 E-value=87 Score=29.61 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=63.5
Q ss_pred CCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhh
Q 017569 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (369)
Q Consensus 154 ~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~ 232 (369)
+|.-|+|+..-.+.....++-..+...||+-. .+..|+-+-|++...+.- -.|+.++...+.++++.+.|++-
T Consensus 75 kPd~IVpEiEAI~td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeL-----glpTs~Y~fa~s~~e~~~a~~~i- 148 (394)
T COG0027 75 KPDYIVPEIEAIATDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEEL-----GLPTSKYRFADSLEELRAAVEKI- 148 (394)
T ss_pred CCCeeeehhhhhhHHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHh-----CCCCccccccccHHHHHHHHHHc-
Confidence 57888999888888887776656666788743 357899999998876642 24788888888999999999998
Q ss_pred hccCCCceEEeecc
Q 017569 233 EETGWDTPIHVDAA 246 (369)
Q Consensus 233 ~~~~~~~~l~vD~a 246 (369)
|++.+|--.
T Consensus 149 -----GfPcvvKPv 157 (394)
T COG0027 149 -----GFPCVVKPV 157 (394)
T ss_pred -----CCCeecccc
Confidence 888887644
No 416
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=40.36 E-value=2.9e+02 Score=25.15 Aligned_cols=65 Identities=17% Similarity=0.145 Sum_probs=39.0
Q ss_pred CcchHHHHHhhhcceeEEEeccCCccccCHHHHHH---HHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC
Q 017569 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE---LVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~---~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~ 238 (369)
+|.++...++.+|+++..+.. + +..+.+.+|.+ .+++ +.++|+... +.+. +.+-.++++. |
T Consensus 176 ~H~af~Y~~~~ygl~~~~~~~-~-~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~------~~~~~la~~~------g 240 (266)
T cd01018 176 YHPAWGYFARDYGLTQIPIEE-E-GKEPSPADLKRLIDLAKEKGVRVVFVQP-QFST------KSAEAIAREI------G 240 (266)
T ss_pred ECchhHHHHHHcCCEEEecCC-C-CCCCCHHHHHHHHHHHHHcCCCEEEEcC-CCCc------HHHHHHHHHc------C
Confidence 567788889999999775532 2 24565555544 5554 456666443 3332 2334777787 7
Q ss_pred ceEE
Q 017569 239 TPIH 242 (369)
Q Consensus 239 ~~l~ 242 (369)
+.++
T Consensus 241 ~~v~ 244 (266)
T cd01018 241 AKVV 244 (266)
T ss_pred CeEE
Confidence 6654
No 417
>PRK05638 threonine synthase; Validated
Probab=39.00 E-value=1.9e+02 Score=28.76 Aligned_cols=51 Identities=12% Similarity=0.020 Sum_probs=36.2
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
.+..++|..+..+|..+... | -+..|++|...-..-...++.+|++++.++
T Consensus 115 vv~aSsGN~g~alA~~aa~~---------G---~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 115 FIVASDGNAAASVAAYSARA---------G---KEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 56667777887777766543 1 134788888765666677788899998886
No 418
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=38.53 E-value=3e+02 Score=27.38 Aligned_cols=124 Identities=17% Similarity=0.093 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCC-CCCCCeEEec-CCCcc---hHH
Q 017569 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK-PYDKPNIVTG-ANVQV---CWE 168 (369)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~-~~~~~~Vi~s-~~~h~---s~~ 168 (369)
.++++.+.+.+.+.+..+. ..++..|||-.+...+..+.... +. +..--.+-.+ ..... ...
T Consensus 236 e~l~~~l~~aV~~r~~~~~-----~vg~~LSGGlDSs~iaa~a~~~~--------~~~~~~~~t~~~~~~~~~~E~~~A~ 302 (467)
T TIGR01536 236 DELRSLLEDAVKRRLVADV-----PVGVLLSGGLDSSLVAAIARREA--------PRGPVHTFSIGFEGSPDFDESPYAR 302 (467)
T ss_pred HHHHHHHHHHHHHHhccCC-----ceEEEecCChhHHHHHHHHHHhc--------CCCCceEEEEecCCCCCCChHHHHH
Confidence 4455555555555544332 35889999999887765543221 00 0000122223 12222 455
Q ss_pred HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
..++.+|++.+.+.++++.+ .+.+.+.+... ..|.... ...+.-.+.+.++++ ++-++.+|-
T Consensus 303 ~vA~~lg~~~~~i~~~~~~~---~~~~~~~v~~~------~~p~~~~-~~~~~~~l~~~a~~~------G~~vlltG~ 364 (467)
T TIGR01536 303 KVADHLGTEHHEVLFSVEEG---LDALPEVIYHL------EDPTTIR-ASIPLYLLSKLARED------GVKVVLSGE 364 (467)
T ss_pred HHHHHhCCcCeEEECCHHHH---HHHHHHHHHhh------CCCCCCc-hHHHHHHHHHHHHhc------CCEEEEecC
Confidence 67788899988887764211 22333333210 0111111 112455677888888 888887764
No 419
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=38.34 E-value=3.6e+02 Score=25.71 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=55.7
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc------hHHHHHhhhcceeEEEeccCCccccCH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNP 192 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (369)
.++..|||..+..++..+.... | .++.++.-++.+. -..+.++.+|++...+.++.
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------g---l~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d~------- 123 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------G---LNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITINP------- 123 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------C---CceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCCH-------
Confidence 3778899999997764443221 1 1233233333332 24556667898888777653
Q ss_pred HHHHHHHhhcCcEEEEeeCCCCcccC--CCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 193 VKAVELVDENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 193 ~~L~~~i~~~~~~v~~~~~~~~tG~~--~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
+.+++....... ...+|.... .....+.++|+++ ++.+++.|..+
T Consensus 124 ~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~------gi~~Il~G~~~ 170 (343)
T TIGR03573 124 ETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKF------NIPLIIWGENI 170 (343)
T ss_pred HHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHh------CCCEEEeCCCH
Confidence 222222221100 111222222 2366788999999 99999998644
No 420
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=38.18 E-value=2e+02 Score=25.67 Aligned_cols=95 Identities=13% Similarity=-0.002 Sum_probs=56.2
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC-----cc----hHHHHHhhhcceeEEEeccCCcccc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-----QV----CWEKFARYFEVELKEVKLEEGYYVM 190 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~-----h~----s~~~~~~~~G~~v~~v~~~~~~~~~ 190 (369)
..+-|||+.+++.+.++... |.....-..+.|... |. .....++.+|+.+.+.+.+.. ..-
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~---------G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~-~e~ 73 (223)
T COG2102 4 IALYSGGKDSFYALYLALEE---------GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE-EER 73 (223)
T ss_pred EEEEecCcHHHHHHHHHHHc---------CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc-chh
Confidence 56778999998666665533 211111122333332 21 244556777999888887642 344
Q ss_pred CHHHHHHHHhh-cCcEEEEeeCCCCcccC---CCHHHHHHHHHHh
Q 017569 191 NPVKAVELVDE-NTICVAAILGSTLTGEF---EDVKLLHDLLTKK 231 (369)
Q Consensus 191 d~~~L~~~i~~-~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~ 231 (369)
..++|.+++.. +...|+ +|.+ .-...+-.+|++.
T Consensus 74 eve~L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l 111 (223)
T COG2102 74 EVEELKEALRRLKVDGIV-------AGAIASEYQKERVERLCEEL 111 (223)
T ss_pred hHHHHHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh
Confidence 67888888765 222332 3555 3467788899988
No 421
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=37.29 E-value=2.8e+02 Score=24.20 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=41.8
Q ss_pred eEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhcc
Q 017569 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (369)
Q Consensus 156 ~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~ 235 (369)
++++-+. .......++..|+.++..+.+ |.+.|.++++.- -.|+++.+.+.....+--..|.+.|++.
T Consensus 26 ~~l~R~~-~~~~~~~l~~~g~~vv~~d~~------~~~~l~~al~g~-d~v~~~~~~~~~~~~~~~~~li~Aa~~a---- 93 (233)
T PF05368_consen 26 RALVRDP-SSDRAQQLQALGAEVVEADYD------DPESLVAALKGV-DAVFSVTPPSHPSELEQQKNLIDAAKAA---- 93 (233)
T ss_dssp EEEESSS-HHHHHHHHHHTTTEEEES-TT-------HHHHHHHHTTC-SEEEEESSCSCCCHHHHHHHHHHHHHHH----
T ss_pred EEEEecc-chhhhhhhhcccceEeecccC------CHHHHHHHHcCC-ceEEeecCcchhhhhhhhhhHHHhhhcc----
Confidence 4555554 222333344567766533332 689999999853 3445555544434445567788888888
Q ss_pred CCCceEEe
Q 017569 236 GWDTPIHV 243 (369)
Q Consensus 236 ~~~~~l~v 243 (369)
++-.++
T Consensus 94 --gVk~~v 99 (233)
T PF05368_consen 94 --GVKHFV 99 (233)
T ss_dssp --T-SEEE
T ss_pred --ccceEE
Confidence 765554
No 422
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=36.47 E-value=2.4e+02 Score=23.17 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=47.3
Q ss_pred CeEEecCCCcchHHHHHhhh-cceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC--CCCcccCCCHHHHHHHHHH
Q 017569 155 PNIVTGANVQVCWEKFARYF-EVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG--STLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~--~~~tG~~~~l~~I~~l~~~ 230 (369)
..++.+..+. +.++.. |+.+..| +.+ ..+. .++.+.|.....-++++.+ +...+...+...|.+.|-+
T Consensus 33 f~l~AT~gTa----~~L~~~~Gi~v~~v-i~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~ 104 (142)
T PRK05234 33 HELYATGTTG----GLIQEATGLDVTRL-LSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADV 104 (142)
T ss_pred CEEEEeChHH----HHHHhccCCeeEEE-EcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHH
Confidence 4555554332 333444 8887777 432 2233 4466667766555566665 4444435678899999999
Q ss_pred hhhccCCCceEEeec
Q 017569 231 KNEETGWDTPIHVDA 245 (369)
Q Consensus 231 ~~~~~~~~~~l~vD~ 245 (369)
+ +++++..-
T Consensus 105 ~------~IP~~T~l 113 (142)
T PRK05234 105 W------NIPVATNR 113 (142)
T ss_pred c------CCCEEcCH
Confidence 9 99988654
No 423
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=36.04 E-value=1.6e+02 Score=23.66 Aligned_cols=58 Identities=12% Similarity=-0.039 Sum_probs=35.4
Q ss_pred CcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHH
Q 017569 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
..+.+...++..|.++....+-+| |.+++++++.+ +..+|+ +.|.+-.|..|-..+..
T Consensus 20 n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~i~~~~~~~Dlvi-ttGG~g~g~~D~t~~ai 80 (133)
T cd00758 20 NGPALEALLEDLGCEVIYAGVVPD----DADSIRAALIEASREADLVL-TTGGTGVGRRDVTPEAL 80 (133)
T ss_pred hHHHHHHHHHHCCCEEEEeeecCC----CHHHHHHHHHHHHhcCCEEE-ECCCCCCCCCcchHHHH
Confidence 345566777888998887766554 45666665543 345554 44555557777665533
No 424
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=35.20 E-value=3.5e+02 Score=24.59 Aligned_cols=69 Identities=7% Similarity=0.090 Sum_probs=41.5
Q ss_pred CcchHHHHHhhhcceeEEEe----ccCCccccCHHHHHHHH---hh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhc
Q 017569 163 VQVCWEKFARYFEVELKEVK----LEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~----~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~ 234 (369)
.|.++...++.+|++++.+. .......+.+.+|.+.+ .+ +.++|+.....++ ..++.|..++++.
T Consensus 159 ~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~----k~~~~l~~la~~~--- 231 (264)
T cd01020 159 TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALIVNPQQAS----SATTNITGLAKRS--- 231 (264)
T ss_pred eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEEeCCCCCc----HHHHHHHHHHHHc---
Confidence 58889999999999865321 11112466666665554 44 4566654333322 2355666788888
Q ss_pred cCCCceE
Q 017569 235 TGWDTPI 241 (369)
Q Consensus 235 ~~~~~~l 241 (369)
++.+
T Consensus 232 ---~~~v 235 (264)
T cd01020 232 ---GVPV 235 (264)
T ss_pred ---CCCE
Confidence 7655
No 425
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=35.02 E-value=1.2e+02 Score=27.78 Aligned_cols=61 Identities=20% Similarity=0.351 Sum_probs=40.6
Q ss_pred EEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCccc---CCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~---~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
+.|-+... ..++++++..+++. ++.++..--|.+. |. +-|+..|.- .|+. ++++++|..++
T Consensus 117 kpV~lKrG-~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~-~k~~------~~PVi~DpSHs 185 (258)
T TIGR01362 117 RIVNVKKG-QFLSPWDMKNVVEKVLSTGNKNILLCERGTSF-GYNNLVVDMRSLPI-MREL------GCPVIFDATHS 185 (258)
T ss_pred CeEEecCC-CcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHH-HHhc------CCCEEEeCCcc
Confidence 34444443 45778777665543 5667777777765 65 357777764 4567 89999999986
No 426
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=34.97 E-value=1.8e+02 Score=23.76 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=36.0
Q ss_pred cchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHH
Q 017569 164 QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
-+.+...++.+|+++..+.+-.| |.+.|.+++.+ +..+|+.+ |.+..|..|-..+..
T Consensus 29 ~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~DliItt-GG~g~g~~D~t~~ai 88 (144)
T TIGR00177 29 GPLLAALLEEAGFNVSRLGIVPD----DPEEIREILRKAVDEADVVLTT-GGTGVGPRDVTPEAL 88 (144)
T ss_pred HHHHHHHHHHCCCeEEEEeecCC----CHHHHHHHHHHHHhCCCEEEEC-CCCCCCCCccHHHHH
Confidence 34667777888999888876555 45666666553 34555555 555557776655533
No 427
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=33.75 E-value=1e+02 Score=30.21 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=47.5
Q ss_pred EecCCCcchHHHHHhhh--cceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHHHHHHHhh
Q 017569 158 VTGANVQVCWEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (369)
Q Consensus 158 i~s~~~h~s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~ 232 (369)
++..++|+...|. +.+ .-++..++..+.....+.+.|.+.+.. ...+++ .....-|...+++.+.++|++.
T Consensus 95 l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vV--LSDY~KG~L~~~q~~I~~ar~~- 170 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALV--LSDYAKGVLTNVQKMIDLAREA- 170 (467)
T ss_pred eEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEE--EeccccccchhHHHHHHHHHHc-
Confidence 3444555544332 222 223555665443222455666666654 234444 2456679999999999999999
Q ss_pred hccCCCceEEee
Q 017569 233 EETGWDTPIHVD 244 (369)
Q Consensus 233 ~~~~~~~~l~vD 244 (369)
++++.+|
T Consensus 171 -----~~pVLvD 177 (467)
T COG2870 171 -----GIPVLVD 177 (467)
T ss_pred -----CCcEEEC
Confidence 9999999
No 428
>PTZ00323 NAD+ synthase; Provisional
Probab=33.75 E-value=4e+02 Score=24.90 Aligned_cols=102 Identities=8% Similarity=0.006 Sum_probs=53.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
+.+|++.+.+.+.-....+++.. ...+....+++++.+ .|.+ ..++..|||-.+...+..+.+.-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~L~~~l~~-~g~~------~vVVglSGGVDSav~aaLa~~al------ 70 (294)
T PTZ00323 6 PLHPELQRVLKEVRRKRAFNPAA--WIEKKCAKLNEYMRR-CGLK------GCVTSVSGGIDSAVVLALCARAM------ 70 (294)
T ss_pred cCCHHHHHHHHHhCCCCCCCHHH--HHHHHHHHHHHHHHH-cCCC------cEEEECCCCHHHHHHHHHHHHHh------
Confidence 35678888887765544443321 222333333333433 3443 23677789998887776665431
Q ss_pred hcCCCCCC-CeE-EecCCCc------chHHHHHhhhcceeEEEeccC
Q 017569 147 EQGKPYDK-PNI-VTGANVQ------VCWEKFARYFEVELKEVKLEE 185 (369)
Q Consensus 147 ~~g~~~~~-~~V-i~s~~~h------~s~~~~~~~~G~~v~~v~~~~ 185 (369)
|..... ..+ -+..+.+ ......++.+|+..+.|++++
T Consensus 71 --g~~~~~~~~~~~v~~P~~ss~~~~~~A~~la~~lGi~~~~idi~~ 115 (294)
T PTZ00323 71 --RMPNSPIQKNVGLCQPIHSSAWALNRGRENIQACGATEVTVDQTE 115 (294)
T ss_pred --ccccCCceEEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEECcH
Confidence 111000 111 1222223 234556677899999998875
No 429
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=33.23 E-value=1.9e+02 Score=23.11 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=35.7
Q ss_pred CcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHH
Q 017569 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
..+.+...++..|++++...+-.| |.+.+++.+.+ +..+|+.+ |.+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~~~~~~~~v~D----d~~~I~~~l~~~~~~~dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGIEVTRYVIVPD----DKEAIKEALREALERADLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCCeEEEEEEeCC----CHHHHHHHHHHHHhCCCEEEEc-CCCCCCCCcCcHHHH
Confidence 345677778888998777665444 55666666543 34455544 555557777665543
No 430
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=32.51 E-value=86 Score=29.86 Aligned_cols=128 Identities=11% Similarity=0.008 Sum_probs=69.6
Q ss_pred eEEecCCCcch-----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEE-eeC--CCCcccCCCHHHHHHH
Q 017569 156 NIVTGANVQVC-----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA-ILG--STLTGEFEDVKLLHDL 227 (369)
Q Consensus 156 ~Vi~s~~~h~s-----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~-~~~--~~~tG~~~~l~~I~~l 227 (369)
.++.-..++-+ +...++.+|++++.-+...|.-.+-.++++.+..++.-+|++ |+| +|-..-++.++.|.++
T Consensus 170 VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~nLM~EL~KI~rV 249 (340)
T COG0552 170 VLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRV 249 (340)
T ss_pred EEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchhHHHHHHHHHHH
Confidence 44444445432 444556678777654432233345567778887777655543 443 3444556789999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
+++.-..-.-.++++.|+..|--.+ -+ .-.|. .-++|.+. .-|.=+...|..++-+
T Consensus 250 ~~k~~~~ap~e~llvlDAttGqnal--~Q---Ak~F~eav~l~GiI--lTKlDgtAKGG~il~I 306 (340)
T COG0552 250 IKKDDPDAPHEILLVLDATTGQNAL--SQ---AKIFNEAVGLDGII--LTKLDGTAKGGIILSI 306 (340)
T ss_pred hccccCCCCceEEEEEEcccChhHH--HH---HHHHHHhcCCceEE--EEecccCCCcceeeeH
Confidence 9886110000277778998774333 11 01122 33566666 3466555665444433
No 431
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=32.45 E-value=1e+02 Score=28.49 Aligned_cols=75 Identities=11% Similarity=-0.032 Sum_probs=48.8
Q ss_pred CHHHHHHHHhh----cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe-ecccccccccccCCCccccccC
Q 017569 191 NPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV-DAASGGFIAPFLYPDLEWDFRL 265 (369)
Q Consensus 191 d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v-D~a~~~~~~~~~~~~~~~~~~~ 265 (369)
|.+.+.++|.. ++..++ -+||-|.++.-.+|+++.++++. .+.++| +-|.+++.+ + .
T Consensus 76 dse~v~raI~~~~~~~~IdLi---i~TpGG~v~AA~~I~~~l~~~~~----~v~v~VP~~A~SAGTl--------I---A 137 (285)
T PF01972_consen 76 DSEFVLRAIREAPKDKPIDLI---IHTPGGLVDAAEQIARALREHPA----KVTVIVPHYAMSAGTL--------I---A 137 (285)
T ss_pred hHHHHHHHHHhcCCCCceEEE---EECCCCcHHHHHHHHHHHHhCCC----CEEEEECcccccHHHH--------H---H
Confidence 34556666653 233333 26888999999999999999843 343444 566665554 1 2
Q ss_pred CCCcEEEEcCccCCCCCCC
Q 017569 266 PLVKSINVSGHKYGLVYAG 284 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~~p~g 284 (369)
.++|-+..+.+--++ |-.
T Consensus 138 LaADeIvM~p~a~LG-piD 155 (285)
T PF01972_consen 138 LAADEIVMGPGAVLG-PID 155 (285)
T ss_pred HhCCeEEECCCCccC-CCC
Confidence 368899988888874 443
No 432
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=32.41 E-value=1.2e+02 Score=27.79 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 219 EDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
-.-+++.++.+++ ++-+++|+.|
T Consensus 53 l~~e~l~~~l~e~------~i~llIDATH 75 (257)
T COG2099 53 LGAEGLAAFLREE------GIDLLIDATH 75 (257)
T ss_pred CCHHHHHHHHHHc------CCCEEEECCC
Confidence 5688999999999 9999999975
No 433
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=32.27 E-value=79 Score=31.60 Aligned_cols=44 Identities=20% Similarity=0.120 Sum_probs=29.3
Q ss_pred HHHHHHHhh-----cCcEEEEeeCCCCcccC-CCHHHHHHHHH-HhhhccCCCceEEe
Q 017569 193 VKAVELVDE-----NTICVAAILGSTLTGEF-EDVKLLHDLLT-KKNEETGWDTPIHV 243 (369)
Q Consensus 193 ~~L~~~i~~-----~~~~v~~~~~~~~tG~~-~~l~~I~~l~~-~~~~~~~~~~~l~v 243 (369)
++|.++|.+ +|++|++.. +=++|.+ ||++.+++-++ ++ +++++.
T Consensus 83 ~~L~~~i~ei~~~~~p~~ifv~~-TC~t~iIGdDle~va~~~~~~~------gipVV~ 133 (457)
T CHL00073 83 EELKRLCLQIKKDRNPSVIVWIG-TCTTEIIKMDLEGMAPKLEAEI------GIPIVV 133 (457)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEc-cCcHHhhccCHHHHHHHHHHhh------CCCEEE
Confidence 566666553 466665444 4455877 99999987665 67 887774
No 434
>PRK08329 threonine synthase; Validated
Probab=32.17 E-value=1.6e+02 Score=28.23 Aligned_cols=52 Identities=19% Similarity=0.069 Sum_probs=36.3
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
++..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++-
T Consensus 107 vv~aSsGN~g~alA~~aa~~---------G---~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 107 VVIDSSGNAALSLALYSLSE---------G---IKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred EEEECCCcHHHHHHHHHHHc---------C---CcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 66667778888777766543 1 1347888887655566677888999988863
No 435
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=32.06 E-value=4e+02 Score=24.40 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=35.7
Q ss_pred CcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHH---hh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
+|.++...++.+|+++..+. ..+ +..+.+.+|.+.+ ++ +.++|+.... .+. +.+..++++.
T Consensus 177 ~H~af~Y~~~~~gl~~~~~~~~~~-~~eps~~~l~~l~~~ik~~~v~~if~e~~-~~~------~~~~~la~~~ 242 (282)
T cd01017 177 QHAAFGYLARRYGLKQIAIVGVSP-EVEPSPKQLAELVEFVKKSDVKYIFFEEN-ASS------KIAETLAKET 242 (282)
T ss_pred ecccHHHHHHHCCCeEEecccCCC-CCCCCHHHHHHHHHHHHHcCCCEEEEeCC-CCh------HHHHHHHHHc
Confidence 56677888899999976543 222 2456666665544 44 4556554433 332 3334577777
No 436
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=31.82 E-value=50 Score=34.36 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.3
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
|.|| |-+.-.++-.++|++| |.+++.-+||||+-.
T Consensus 164 PGTp-gPitt~~EA~eF~k~y------G~PvI~KAAyGGGGR 198 (1176)
T KOG0369|consen 164 PGTP-GPITTVEEALEFVKEY------GLPVIIKAAYGGGGR 198 (1176)
T ss_pred CCCC-CCcccHHHHHHHHHhc------CCcEEEeecccCCCc
Confidence 5566 7777889999999999 999999999998764
No 437
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=31.47 E-value=1e+02 Score=24.19 Aligned_cols=45 Identities=13% Similarity=0.009 Sum_probs=30.4
Q ss_pred CHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
-++.++++....++.+++..+ ..-+++.+.|+++ ++.++-.+|.|
T Consensus 68 ~~~~v~~~~~~g~~~v~~~~g-------~~~~~~~~~a~~~------gi~vigp~C~g 112 (116)
T PF13380_consen 68 VPEIVDEAAALGVKAVWLQPG-------AESEELIEAAREA------GIRVIGPNCLG 112 (116)
T ss_dssp HHHHHHHHHHHT-SEEEE-TT-------S--HHHHHHHHHT------T-EEEESS-HH
T ss_pred HHHHHHHHHHcCCCEEEEEcc-------hHHHHHHHHHHHc------CCEEEeCCcce
Confidence 346666666667888887777 5678899999999 99988787765
No 438
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.27 E-value=84 Score=22.80 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=24.8
Q ss_pred cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++|.+.+|.+. |++.|.+-++.. +. ..|+.||-
T Consensus 18 RviaIVsPESa-----PiKRii~eArdr------~~--LIDATYGR 50 (89)
T COG2052 18 RVIAIVSPESA-----PIKRIIQEARDR------GM--LIDATYGR 50 (89)
T ss_pred eEEEEECCCcc-----cHHHHHHHHHhc------Cc--EEEcccCc
Confidence 45556666655 999999999988 64 46999984
No 439
>PLN02565 cysteine synthase
Probab=31.23 E-value=1.7e+02 Score=27.66 Aligned_cols=52 Identities=21% Similarity=0.094 Sum_probs=38.1
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..|+|..+..+|..+... | -+..|++|+..-..-...++.+|++++.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAK---------G---YKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHc---------C---CeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 46667888888777766432 1 1347888888777788888999999987754
No 440
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.11 E-value=4.3e+02 Score=24.38 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=36.6
Q ss_pred CcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHHh---h-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
+|.++...++.+|+++..+- +..+ ..+.+.+|.+.++ + +.++|+.... .+ -+.+..++++.
T Consensus 185 ~H~af~Yl~~~~gl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~If~e~~-~~------~~~~~~ia~~~ 250 (286)
T cd01019 185 FHDAYGYFEKRYGLTQAGVFTIDPE-IDPGAKRLAKIRKEIKEKGATCVFAEPQ-FH------PKIAETLAEGT 250 (286)
T ss_pred ecccHHHHHHHcCCceeeeecCCCC-CCCCHHHHHHHHHHHHHcCCcEEEecCC-CC------hHHHHHHHHhc
Confidence 56788888999999866532 3332 5677776666554 3 4556653333 22 24455667676
No 441
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=29.46 E-value=1.9e+02 Score=26.67 Aligned_cols=53 Identities=19% Similarity=0.077 Sum_probs=36.5
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++++.++-+
T Consensus 56 vv~~SsGN~g~alA~~a~~~---------G---~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 56 IIEPTSGNTGIGLAMVAAAK---------G---YRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45566777777666655432 1 13478888877677777888899999888743
No 442
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=28.90 E-value=1.9e+02 Score=25.72 Aligned_cols=52 Identities=23% Similarity=0.102 Sum_probs=33.1
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..++..+... | -+..|++|..........++.+|++++.++-
T Consensus 53 vv~~ssGN~g~alA~~a~~~---------g---~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 53 IIESTGGNTGIALAAAAARL---------G---LKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 44445566666555544322 1 1347888887766677778888998887764
No 443
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family. No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.
Probab=28.54 E-value=4.6e+02 Score=24.28 Aligned_cols=81 Identities=4% Similarity=-0.102 Sum_probs=52.7
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhc
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~ 234 (369)
..+|+.+.+..+ .+....+++.-..+.+.+.+..-....+.+.+...-.+.+++-..+| |.-||=..|++.|++.
T Consensus 26 ~d~i~~EDTR~t-~kLL~~~~I~~~~~~~~~hn~~~~~~~l~~~l~~g~~valvSDAG~P-~ISDPG~~LV~~~~~~--- 100 (276)
T TIGR00096 26 VDLFAEEDTRTS-KLLLHLGIIATPKAFHIDNEFQEKQNLLAAKLEIGNNIAVSSDAGPP-LISDPGHLLVACREKA--- 100 (276)
T ss_pred CCEEEecCchhH-HHHHHhcCCCCceEEEecccHhHHHHHHHHHHHcCCcEEEEecCCCC-CcCCccHHHHHHHHHC---
Confidence 457777777654 56667778765555555433344455555555544334455556677 7889999999999999
Q ss_pred cCCCceEEe
Q 017569 235 TGWDTPIHV 243 (369)
Q Consensus 235 ~~~~~~l~v 243 (369)
|+.+++
T Consensus 101 ---~i~v~~ 106 (276)
T TIGR00096 101 ---NIIVVP 106 (276)
T ss_pred ---CCeEEc
Confidence 875553
No 444
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=27.65 E-value=1.9e+02 Score=26.98 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=31.6
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc-chHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-VCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h-~s~~~~~~~~G~~v~~v~~ 183 (369)
.++++||+.+|+..-.++.-+. .| -+..|++|.... ......++.+|++++.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~------~G---~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKK------LG---LDAVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHH------hC---CceEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 5788877666655333322110 11 134788887432 2334456889999988874
No 445
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO). Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B (6.3.5.4 from EC) catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase [].; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A 1Q15_D 1Q19_C 1CT9_C 3K32_F.
Probab=27.64 E-value=55 Score=29.03 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEE---ecCCCc---chH
Q 017569 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIV---TGANVQ---VCW 167 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~Vi---~s~~~h---~s~ 167 (369)
|+++.+.+-+++.+..+. ..++..|||..+-..+..+.... + .+ ..+ ...... .-.
T Consensus 1 ~~r~~l~~av~~rl~~~~-----~i~~~LSGGlDSs~i~~~~~~~~--------~----~~~~~~t~~~~~~~~~e~~~a 63 (255)
T PF00733_consen 1 ELRELLEEAVARRLRSDK-----PIGILLSGGLDSSAIAALAARQG--------G----PPIKTFTIGFEDDDYDEREYA 63 (255)
T ss_dssp HHHHHHHHHHHHHCGCTS-----EEEEE--SSHHHHHHHHHHHHTC--------C----SEEEEEEEECSSCC--HHHHH
T ss_pred CHHHHHHHHHHHHHhcCC-----CEEEECCCChhHHHHHHHHHHhh--------C----CceeEEEEEcCCCcchhHHHH
Confidence 355566666777655443 34889999999987776665410 1 12 111 122221 124
Q ss_pred HHHHhhhcceeEEEeccCCccccCHHHHHHHHhh--cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
...++.+|.+.+.+.++.+++ .+.+++.+.. .|... .. ....+...+++.+++. ++-++++|
T Consensus 64 ~~va~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~------~~-~~~~~~~~~~~~a~~~------~~~~~ltG 127 (255)
T PF00733_consen 64 RKVARHLGLEHHEIELDPEDL---LDNLEDIIWRLDGPSPL------DD-PNSLPLYLLARLAREN------GIRVLLTG 127 (255)
T ss_dssp HHHHHHHT-EEEEEEE-HHHH---HHHHHHHHHHHT---HH------HH-HHHHHHHHHHHHHCHT------TBSEEE--
T ss_pred HHHhcccccccceeeechhhH---HHhHHHHHHHHhCCccc------cc-ccccHHHHHHHhhccc------ceeEEEec
Confidence 567778899988887764311 1223332221 11100 00 1112455566777767 88899998
Q ss_pred ccccc
Q 017569 246 ASGGF 250 (369)
Q Consensus 246 a~~~~ 250 (369)
.-|.-
T Consensus 128 ~GgDe 132 (255)
T PF00733_consen 128 QGGDE 132 (255)
T ss_dssp TTHHH
T ss_pred ccccc
Confidence 65543
No 446
>smart00642 Aamy Alpha-amylase domain.
Probab=27.58 E-value=51 Score=27.92 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=25.9
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
..|..++++++++-|+++ ++.+++|-+...
T Consensus 65 ~~Gt~~d~~~lv~~~h~~------Gi~vilD~V~NH 94 (166)
T smart00642 65 RFGTMEDFKELVDAAHAR------GIKVILDVVINH 94 (166)
T ss_pred ccCCHHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 457789999999999999 999999987543
No 447
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=26.59 E-value=1.8e+02 Score=26.91 Aligned_cols=53 Identities=21% Similarity=0.186 Sum_probs=38.9
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|+..-..-...++.+|++++.++-+
T Consensus 62 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 62 LIEATSGNTGIALAMIAALK---------G---YRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEEECCChHHHHHHHHHHHc---------C---CeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 56677888888777666533 1 13478888877777778889999999988743
No 448
>PRK11761 cysM cysteine synthase B; Provisional
Probab=26.45 E-value=2.4e+02 Score=26.21 Aligned_cols=52 Identities=19% Similarity=0.167 Sum_probs=38.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+... | -+-.|++|+..-..-...++.+|++++.++-
T Consensus 66 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAIK---------G---YRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 66677888888777766533 1 1347888887666777888899999998885
No 449
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=26.37 E-value=2.1e+02 Score=26.45 Aligned_cols=52 Identities=21% Similarity=0.152 Sum_probs=38.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+.+. | -+..|++|+..-..-...++.+|++++.++-
T Consensus 60 vv~aSsGN~g~alA~~a~~~---------G---l~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 60 IVEPTSGNTGIALAMVAAAR---------G---YKLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred EEEeCCChhHHHHHHHHHHc---------C---CeEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 56667888888777666533 1 1347888987767777788999999998874
No 450
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=25.87 E-value=13 Score=31.82 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=33.5
Q ss_pred HHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 194 KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 194 ~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.|+++++.+..+|++.. |.+..++.+.+.++++++ .+++|+|-.-|.
T Consensus 11 ~l~~al~s~~~~vfLl~-----g~I~~l~~~v~~~~~~gK----~vfVHiDli~Gl 57 (175)
T PF04309_consen 11 DLEKALESDVEVVFLLT-----GDIGNLKDIVKRLKAAGK----KVFVHIDLIEGL 57 (175)
T ss_dssp CCCCCCCSSSSEEEE-S-----EECCCHHHHHHHHHHTT-----EEEEECCGEETB
T ss_pred HHHHHHcCCCCEEEEEc-----CcHHHHHHHHHHHHHcCC----EEEEEehhcCCC
Confidence 35556666666766554 566799999999999844 689999987663
No 451
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.87 E-value=46 Score=30.44 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=28.5
Q ss_pred eCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 210 ~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
....-.|+.++++++++.|+++ |+.|++|-+..
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~------gi~VilD~V~N 75 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKR------GIKVILDVVPN 75 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHT------TCEEEEEEETS
T ss_pred ccccccchhhhhhhhhhccccc------cceEEEeeecc
Confidence 3566778899999999999999 99999998765
No 452
>PLN00011 cysteine synthase
Probab=25.59 E-value=2.7e+02 Score=26.23 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=37.5
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+... | -+-.|++|...-......++.+|++++.++-
T Consensus 72 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 72 LIEATAGNTGIGLACIGAAR---------G---YKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 55667888888777666533 1 1247888887766777888999999988774
No 453
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=25.50 E-value=3.8e+02 Score=22.66 Aligned_cols=77 Identities=10% Similarity=-0.075 Sum_probs=46.4
Q ss_pred eEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhcc
Q 017569 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (369)
Q Consensus 156 ~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~ 235 (369)
+++.-..+...+..++...|++++...=+-| -.|-++.++-+.+++.-.+++.++.. |+..++.-+++.
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~kG~~D-v~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~---- 128 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVAGDVD-VRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKEN---- 128 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEecCccc-HHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHC----
Confidence 4555444455667777788888664321111 33344555544455555666666543 588888888888
Q ss_pred CCCceEEeec
Q 017569 236 GWDTPIHVDA 245 (369)
Q Consensus 236 ~~~~~l~vD~ 245 (369)
|..+++=|
T Consensus 129 --G~~V~v~g 136 (160)
T TIGR00288 129 --GKETIVIG 136 (160)
T ss_pred --CCEEEEEe
Confidence 88877633
No 454
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=25.49 E-value=2.4e+02 Score=26.55 Aligned_cols=52 Identities=17% Similarity=-0.046 Sum_probs=34.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+... | -+-.|++|...-..-...++.+|++++.++-
T Consensus 54 vv~aSsGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 54 VVCSSGGNAGLAAAYAARKL---------G---VPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45556677777666555432 1 1347888887656667778889999988763
No 455
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=25.44 E-value=2.4e+02 Score=25.01 Aligned_cols=16 Identities=0% Similarity=0.001 Sum_probs=7.1
Q ss_pred HHHHHHhhcCcEEEEe
Q 017569 194 KAVELVDENTICVAAI 209 (369)
Q Consensus 194 ~L~~~i~~~~~~v~~~ 209 (369)
.++..+..+...|++.
T Consensus 47 ~l~~~~~~~vdgii~~ 62 (273)
T cd06305 47 QIDQAIAQKVDAIIIQ 62 (273)
T ss_pred HHHHHHHcCCCEEEEe
Confidence 3334444445555443
No 456
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.36 E-value=2.6e+02 Score=25.90 Aligned_cols=61 Identities=10% Similarity=0.131 Sum_probs=37.0
Q ss_pred CcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHHh---h-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
.|.++...++.+|+++..+- ..+ +..+.+.+|.+.++ + +.++|+.....++ +.+..++++.
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~-~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ia~~~ 248 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINT-EEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMKQVAKET 248 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCC-CCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHHHHHHHh
Confidence 46677788899999976542 222 24666766666554 3 4566654333222 4456778887
No 457
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=25.33 E-value=4.7e+02 Score=23.04 Aligned_cols=94 Identities=9% Similarity=-0.019 Sum_probs=47.6
Q ss_pred EEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-e--cC---------CCcchHHHHHhhhcceeEEEeccCCcc
Q 017569 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-T--GA---------NVQVCWEKFARYFEVELKEVKLEEGYY 188 (369)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi-~--s~---------~~h~s~~~~~~~~G~~v~~v~~~~~~~ 188 (369)
+..|||..+.+.+.++... | .....+ + +. .........++.+|++.+.++++.. .
T Consensus 2 vl~SGGkDS~~al~~a~~~---------G---~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~-~ 68 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALEE---------G---HEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGE-K 68 (218)
T ss_pred eeecCcHHHHHHHHHHHHc---------C---CEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCC-C
Confidence 4678999999776655432 1 111112 2 11 1122455677888999888887631 1
Q ss_pred ccCHHHHHHHHhh----cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 189 VMNPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 189 ~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
....+.|.+++.+ .... +..|.+..- .+-..+.++|.+.
T Consensus 69 ~~~~~~l~~~l~~~~~~g~~~--vv~G~i~sd--~~~~~~e~v~~~~ 111 (218)
T TIGR03679 69 EKEVEDLKGALKELKREGVEG--IVTGAIASR--YQKSRIERICEEL 111 (218)
T ss_pred hHHHHHHHHHHHHHHHcCCCE--EEECCcccH--hHHHHHHHHHHhC
Confidence 1223345444432 2222 234544431 1234455677666
No 458
>COG0303 MoeA Molybdopterin biosynthesis enzyme [Coenzyme metabolism]
Probab=24.73 E-value=1.7e+02 Score=28.84 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=39.2
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc---CcEEEEeeCCCCcccCCCHHHHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHD 226 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~l~~I~~ 226 (369)
+.+...++.+|++++....-+| |.+++++++.+- ..+ ++++|.+..|..|-+.++.+
T Consensus 206 ~~l~a~l~~~G~e~~~~giv~D----d~~~l~~~i~~a~~~~Dv-iItsGG~SvG~~D~v~~~l~ 265 (404)
T COG0303 206 YMLAALLERAGGEVVDLGIVPD----DPEALREAIEKALSEADV-IITSGGVSVGDADYVKAALE 265 (404)
T ss_pred HHHHHHHHHcCCceeeccccCC----CHHHHHHHHHHhhhcCCE-EEEeCCccCcchHhHHHHHH
Confidence 4567777888998888877665 678888888752 334 45556566688776666554
No 459
>PLN02970 serine racemase
Probab=24.65 E-value=2.3e+02 Score=26.83 Aligned_cols=52 Identities=21% Similarity=0.063 Sum_probs=37.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|+.+... | -+-.|++|+.+-..-...++.+|++++.++-
T Consensus 78 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 78 VVTHSSGNHAAALALAAKLR---------G---IPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 56667888888777666533 1 1347888887766666678889999988874
No 460
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=24.05 E-value=1.6e+02 Score=29.27 Aligned_cols=52 Identities=8% Similarity=-0.100 Sum_probs=39.2
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
++..|+|..++-.|+.+.... -+..|++|...-..-...++.+|++|+.++-
T Consensus 155 Vv~aSsGN~G~slA~~Aa~lG------------~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~ 206 (431)
T TIGR02035 155 IAVGSTGNLGLSIGIISAALG------------FQVTVHMSADAKQWKKDKLRSKGVTVVEYES 206 (431)
T ss_pred EEEECccHHHHHHHHHHHHcC------------CCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 566788888888877775431 1357888988777777788899999988874
No 461
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=23.79 E-value=2.9e+02 Score=26.12 Aligned_cols=56 Identities=16% Similarity=0.014 Sum_probs=32.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc--------hHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--------CWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~--------s~~~~~~~~G~~v~~v~~~ 184 (369)
.++|+|++.+|...-.++.-+. .| -+..|++|...-. .....++.+|++++.++-+
T Consensus 66 ~vvt~g~s~gN~g~alA~~a~~------~G---~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~ 129 (331)
T PRK03910 66 TLITAGAIQSNHARQTAAAAAK------LG---LKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAG 129 (331)
T ss_pred EEEEcCcchhHHHHHHHHHHHH------hC---CcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCcc
Confidence 4678887777654333322211 11 1346777765432 2335678899999888754
No 462
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=23.73 E-value=4.2e+02 Score=25.62 Aligned_cols=53 Identities=13% Similarity=0.227 Sum_probs=38.1
Q ss_pred cccCHHHHHHHHhhcCcEEEEe-e-CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 188 YVMNPVKAVELVDENTICVAAI-L-GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~-~-~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+.++.++.+++++-....|+++ + +....+...+++.+.++++.. ++.+++||-
T Consensus 243 gV~~~eda~~a~~~G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~------~~~vi~dGG 297 (361)
T cd04736 243 GIVTAEDAKRCIELGADGVILSNHGGRQLDDAIAPIEALAEIVAAT------YKPVLIDSG 297 (361)
T ss_pred cCCCHHHHHHHHHCCcCEEEECCCCcCCCcCCccHHHHHHHHHHHh------CCeEEEeCC
Confidence 3578888888888766655433 2 333444455799999999888 899999973
No 463
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=23.25 E-value=2.7e+02 Score=23.35 Aligned_cols=63 Identities=13% Similarity=0.004 Sum_probs=37.7
Q ss_pred CcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCCHHH-HHHHHHH
Q 017569 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKL-LHDLLTK 230 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~-I~~l~~~ 230 (369)
..+.+...++..|+++..+.+-+| |.+.+++++.+ +..+|+ +.|.+..|..|-..+ +.++.++
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVI-ttGGtg~g~~D~t~eal~~l~~~ 91 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKD----DIYQIRAQVSAWIADPDVQVIL-ITGGTGFTGRDVTPEALEPLFDK 91 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCC----CHHHHHHHHHHHHhcCCCCEEE-ECCCcCCCCCCCcHHHHHHHHCC
Confidence 344566667788999887776555 45555555433 345554 456666688877554 4444433
No 464
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=23.02 E-value=3.1e+02 Score=25.18 Aligned_cols=11 Identities=9% Similarity=0.151 Sum_probs=4.3
Q ss_pred HHhhcCcEEEE
Q 017569 198 LVDENTICVAA 208 (369)
Q Consensus 198 ~i~~~~~~v~~ 208 (369)
.+..++..|++
T Consensus 50 l~~~~vDgIIi 60 (302)
T TIGR02634 50 LIARGVDVLVI 60 (302)
T ss_pred HHHcCCCEEEE
Confidence 33334444433
No 465
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.97 E-value=5.9e+02 Score=23.29 Aligned_cols=65 Identities=14% Similarity=0.133 Sum_probs=37.2
Q ss_pred CcchHHHHHhhhcceeEEEeccCCccccCHHHHHHH---Hhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL---VDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~---i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
.|.++...++.+|++...+.-...+..+.+.+|.+. +++ +.++|+.....++ ..++.|++.++..
T Consensus 167 ~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~~~~~~ 235 (276)
T cd01016 167 AHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIFVESSVNQ----KSIEALQDAVKAR 235 (276)
T ss_pred ecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEEEeCCCCH----HHHHHHHHHHhhc
Confidence 366778889999999765432111245556555554 444 4566654333222 2466666666666
No 466
>PRK08813 threonine dehydratase; Provisional
Probab=22.97 E-value=2.3e+02 Score=27.25 Aligned_cols=51 Identities=8% Similarity=-0.081 Sum_probs=37.2
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
.+..|+|..+..+|..+.... -+-.|++|...-..-...++.+|++++.++
T Consensus 84 VV~aSsGN~G~alA~aa~~~G------------i~~~IvvP~~~~~~K~~~i~~~GAeVv~~g 134 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLG------------VQAITVMPHGAPQTKIAGVAHWGATVRQHG 134 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcC------------CCEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 567788888887777665431 134788888776677777888999988774
No 467
>PRK08638 threonine dehydratase; Validated
Probab=22.88 E-value=1.7e+02 Score=27.90 Aligned_cols=51 Identities=10% Similarity=-0.155 Sum_probs=36.8
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
.+.+++|..+..+|+.+.... -+..|++|+.....-...++.+|++++.++
T Consensus 78 vv~~SsGN~g~alA~~aa~~G------------~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLG------------IDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcC------------CCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 566677788877776665331 134788888877777778889999998775
No 468
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=22.13 E-value=5.7e+02 Score=22.84 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=34.2
Q ss_pred CcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHH---hh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
.|.++...++.+|+++..+- ..+ ...+.+.+|.+.+ ++ +.++|+.. ++.+. +.+..++++.
T Consensus 156 ~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~~e-~~~~~------~~~~~la~~~ 221 (256)
T PF01297_consen 156 YHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIFTE-PQFSS------KLAEALAKET 221 (256)
T ss_dssp EESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEEEE-TTS-T------HHHHHHHHCC
T ss_pred EChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEEec-CCCCh------HHHHHHHHHc
Confidence 46677788899999977665 333 3567776666655 44 34566544 33321 2344557777
No 469
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=22.02 E-value=2.1e+02 Score=25.50 Aligned_cols=103 Identities=9% Similarity=-0.019 Sum_probs=50.6
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.+..|||..+.+.+.++... +.......-.+...+......+.+......++.+|++++.+.+... ..--.++|.+.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~-~e~~~~~l~~~l 81 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE-EEKEVEDLAGQL 81 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc-hhHHHHHHHHHH
Confidence 56779999999777776544 2100000000000001111111223466777888999877776532 222345555555
Q ss_pred hh-cCcEEEEeeCCCCcccCC---CHHHHHHHHHHh
Q 017569 200 DE-NTICVAAILGSTLTGEFE---DVKLLHDLLTKK 231 (369)
Q Consensus 200 ~~-~~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~ 231 (369)
.+ ....| .+|.++ --..+-++|++.
T Consensus 82 ~~~gv~~v-------v~GdI~s~~qr~~~e~vc~~~ 110 (222)
T TIGR00289 82 GELDVEAL-------CIGAIESNYQKSRIDKVCREL 110 (222)
T ss_pred HHcCCCEE-------EECccccHHHHHHHHHHHHHc
Confidence 44 22222 235553 245566777777
No 470
>PRK08246 threonine dehydratase; Provisional
Probab=22.00 E-value=1.8e+02 Score=27.28 Aligned_cols=52 Identities=13% Similarity=0.006 Sum_probs=37.2
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..++..+.... -+..|++|...-......++.+|++++.++-
T Consensus 71 vv~aSsGN~g~a~A~~a~~~G------------~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (310)
T PRK08246 71 VVAASGGNAGLAVAYAAAALG------------VPATVFVPETAPPAKVARLRALGAEVVVVGA 122 (310)
T ss_pred EEEeCCCHHHHHHHHHHHHcC------------CCEEEEECCCCcHHHHHHHHHCCCEEEEeCC
Confidence 677778888887776665331 1357888877666666778899999888763
No 471
>PRK06815 hypothetical protein; Provisional
Probab=21.99 E-value=2.8e+02 Score=26.01 Aligned_cols=53 Identities=9% Similarity=-0.068 Sum_probs=36.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+... | -+-.|++|...-..-...++.+|++|+.++-+
T Consensus 71 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~ 123 (317)
T PRK06815 71 VITASSGNHGQGVALAAKLA---------G---IPVTVYAPEQASAIKLDAIRALGAEVRLYGGD 123 (317)
T ss_pred EEEECCChHHHHHHHHHHHh---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 45566777777666655432 1 13478888877666677788899999888753
No 472
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=21.66 E-value=4.9e+02 Score=23.69 Aligned_cols=76 Identities=13% Similarity=0.005 Sum_probs=44.1
Q ss_pred EEecCCCcch-------HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHH
Q 017569 157 IVTGANVQVC-------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (369)
Q Consensus 157 Vi~s~~~h~s-------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~ 229 (369)
|++|+.+++. +.+.++..|..+..+..+.+ .... +.++.....+...+++. +... +.+.|..+.+
T Consensus 6 vivp~~~npff~~ii~gIe~~a~~~Gy~l~l~~t~~~-~~~e-~~i~~l~~~~vDGiI~~-s~~~-----~~~~l~~~~~ 77 (279)
T PF00532_consen 6 VIVPDISNPFFAEIIRGIEQEAREHGYQLLLCNTGDD-EEKE-EYIELLLQRRVDGIILA-SSEN-----DDEELRRLIK 77 (279)
T ss_dssp EEESSSTSHHHHHHHHHHHHHHHHTTCEEEEEEETTT-HHHH-HHHHHHHHTTSSEEEEE-SSSC-----TCHHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHHHHHHHcCCEEEEecCCCc-hHHH-HHHHHHHhcCCCEEEEe-cccC-----ChHHHHHHHH
Confidence 6777776654 44455667888877777653 2223 55555556677777766 2222 3556666665
Q ss_pred HhhhccCCCceEEeecc
Q 017569 230 KKNEETGWDTPIHVDAA 246 (369)
Q Consensus 230 ~~~~~~~~~~~l~vD~a 246 (369)
.. -..+.+|..
T Consensus 78 ~~------iPvV~~~~~ 88 (279)
T PF00532_consen 78 SG------IPVVLIDRY 88 (279)
T ss_dssp TT------SEEEEESS-
T ss_pred cC------CCEEEEEec
Confidence 53 345556654
No 473
>PRK10717 cysteine synthase A; Provisional
Probab=21.65 E-value=1.7e+02 Score=27.57 Aligned_cols=52 Identities=27% Similarity=0.132 Sum_probs=38.5
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+.+++|..+..+|..+.+. | -+..|++|...-......++.+|++++.++-
T Consensus 67 vv~aSsGN~g~alA~~a~~~---------G---~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 67 IVEGTAGNTGIGLALVAAAR---------G---YKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 56677888888777766533 1 1357888987766677788899999998874
No 474
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=21.57 E-value=4e+02 Score=23.43 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=18.9
Q ss_pred HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEe
Q 017569 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
..++..|..+...+.+.+ ..-..+.++.++..+...+++.
T Consensus 23 ~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~vdgiii~ 62 (267)
T cd06322 23 EEAKKQKVNLIVSIANQD-LNKQLSDVEDFITKKVDAIVLS 62 (267)
T ss_pred HHHHhcCCEEEEecCCCC-HHHHHHHHHHHHHcCCCEEEEc
Confidence 344445666654443321 1122344455555566666654
No 475
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=21.34 E-value=69 Score=32.17 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=27.9
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.+-.|+.++++++++-|+++ |+.|++|.+...
T Consensus 74 d~~fGt~~dl~~Li~~~H~~------Gi~vi~D~V~NH 105 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHEN------GIKVYADVVLNH 105 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 45678889999999999999 999999998543
No 476
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=21.30 E-value=6.8e+02 Score=23.41 Aligned_cols=61 Identities=10% Similarity=0.119 Sum_probs=37.1
Q ss_pred CcchHHHHHhhhcceeEE-EeccCCccccCHHHHHHHHh---h-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 163 VQVCWEKFARYFEVELKE-VKLEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~-v~~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
+|.++...++.+|+++.. +.+.++ ..+.+.+|.+.++ + +.++|+.....++ +.+..++++.
T Consensus 209 ~H~af~Yf~~~ygl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~~la~e~ 274 (311)
T PRK09545 209 FHDAYGYFEKHYGLTPLGHFTVNPE-IQPGAQRLHEIRTQLVEQKATCVFAEPQFRP-------AVIESVAKGT 274 (311)
T ss_pred ECchHHHHHHhCCCceeeeeccCCC-CCCCHHHHHHHHHHHHHcCCCEEEecCCCCh-------HHHHHHHHhc
Confidence 678888889999998654 333332 4666777666554 3 4566664433222 3455667777
No 477
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=21.18 E-value=2.5e+02 Score=24.74 Aligned_cols=71 Identities=6% Similarity=-0.030 Sum_probs=36.0
Q ss_pred hHHHHHhh---hcce-eEEEeccCCccccCHHHHHHHHhhcC-cEEEEeeCCCCcccC--CCHHHHHHHHHHhhhccCCC
Q 017569 166 CWEKFARY---FEVE-LKEVKLEEGYYVMNPVKAVELVDENT-ICVAAILGSTLTGEF--EDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 166 s~~~~~~~---~G~~-v~~v~~~~~~~~~d~~~L~~~i~~~~-~~v~~~~~~~~tG~~--~~l~~I~~l~~~~~~~~~~~ 238 (369)
+++.++.+ +|+. +++.|... .=.+++++...+... .-+.+ -|||-+ +++++|.++|.+. |
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~G---l~~leE~~avAkA~a~~g~~l----EPTGGIdl~N~~~I~~i~l~a------G 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMGG---LKHLEELKAVAKACARNGFTL----EPTGGIDLDNFEEIVKICLDA------G 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---TT---TTTHHHHHHHHHHHHHCT-EE----EEBSS--TTTHHHHHHHHHHT------T
T ss_pred cHHHHHHHHHHcCCCeeeEeecCC---cccHHHHHHHHHHHHHcCcee----CCcCCcCHHHHHHHHHHHHHc------C
Confidence 45555543 3554 77788764 334566655443211 12222 688887 6899999999999 8
Q ss_pred ceEEeeccccc
Q 017569 239 TPIHVDAASGG 249 (369)
Q Consensus 239 ~~l~vD~a~~~ 249 (369)
+..+.=-.|+.
T Consensus 203 v~~viPHiYss 213 (218)
T PF07071_consen 203 VEKVIPHIYSS 213 (218)
T ss_dssp -S-B--EE-GG
T ss_pred CCeeccchhhh
Confidence 76665555553
No 478
>PRK00685 metal-dependent hydrolase; Provisional
Probab=21.10 E-value=5.5e+02 Score=22.25 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=45.5
Q ss_pred eEEecCCC-cch-HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 156 NIVTGANV-QVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 156 ~Vi~s~~~-h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
.++.+..+ +.. .....+..++++..+|+.. .+.+++++..+.... +++.++.++-.+......+.+++.+.+++.
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~-~~h~~~~ea~~~~~~~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKPDVALLPIGD-NFTMGPEDAALAVELIKPKIVIPMHYNTFPLIEQDPEKFKALVEGL 213 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCCCEEEEecCC-ccccCHHHHHHHHHhhCCCEEEEeccCCCcCCcCCHHHHHHHHHhc
Confidence 45554433 322 3333344577777777754 367888877766654 677777777654433345677777777764
No 479
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=20.96 E-value=2.9e+02 Score=25.43 Aligned_cols=61 Identities=23% Similarity=0.402 Sum_probs=40.0
Q ss_pred EEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 179 KEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
+.|-+... ..++++++..+.+. +..+++.--|.+. |.- -|+..+. +.++. ++++++|..++
T Consensus 125 kpV~lKrG-~~~t~~e~~~aaeyi~~~Gn~~vilcERG~tf-~y~r~~~D~~~vp-~~k~~------~lPVi~DpSHs 193 (264)
T PRK05198 125 KVVNIKKG-QFLAPWDMKNVVDKVREAGNDKIILCERGTSF-GYNNLVVDMRGLP-IMRET------GAPVIFDATHS 193 (264)
T ss_pred CeEEecCC-CcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCc-CCCCeeechhhhH-HHhhC------CCCEEEeCCcc
Confidence 34444443 45777777665543 5667776677755 554 4676665 45557 89999999986
No 480
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.75 E-value=4.1e+02 Score=21.38 Aligned_cols=51 Identities=10% Similarity=0.003 Sum_probs=34.3
Q ss_pred cCCCcchHHHHHhhhcceeEEEeccCCccccC---HHHHHHHHhh--cCcEEEEeeCC
Q 017569 160 GANVQVCWEKFARYFEVELKEVKLEEGYYVMN---PVKAVELVDE--NTICVAAILGS 212 (369)
Q Consensus 160 s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d---~~~L~~~i~~--~~~~v~~~~~~ 212 (369)
..|...+...+++.+|+....||+.. ..++ ++.+.+++++ .|.+...-+|+
T Consensus 43 ~QP~~~~i~~aa~~aGl~y~~iPV~~--~~iT~~dV~~f~~Al~eaegPVlayCrsGt 98 (130)
T COG3453 43 GQPGFAAIAAAAEAAGLTYTHIPVTG--GGITEADVEAFQRALDEAEGPVLAYCRSGT 98 (130)
T ss_pred CCCChHHHHHHHHhcCCceEEeecCC--CCCCHHHHHHHHHHHHHhCCCEEeeecCCc
Confidence 34566778888999999999999975 3454 4555556664 56555544443
No 481
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=20.71 E-value=71 Score=32.73 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=28.9
Q ss_pred eCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 210 ~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.+....|..++++++++.|+++ ||-|++|.++..
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~------Gi~VilD~V~NH 184 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGL------GLGVILDVVYNH 184 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHC------CCEEEEEEccCC
Confidence 4566778889999999999999 999999988753
No 482
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=20.71 E-value=3.1e+02 Score=25.27 Aligned_cols=52 Identities=17% Similarity=-0.006 Sum_probs=34.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+.+++|..+..+|..+... | -+..+++|...-..-...++.+|++++.++-
T Consensus 68 iv~~ssGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 68 VVAASAGNHAQGVAYAAKLL---------G---IPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred EEEECCCHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 55566777777666555432 1 1346777876655566778889999888874
No 483
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=20.48 E-value=1.8e+02 Score=26.49 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=22.5
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
|..-+.+++.++++++ ++-+++|++|
T Consensus 50 G~lg~~~~l~~~l~~~------~i~~vIDATH 75 (249)
T PF02571_consen 50 GRLGDEEGLAEFLREN------GIDAVIDATH 75 (249)
T ss_pred CCCCCHHHHHHHHHhC------CCcEEEECCC
Confidence 4445789999999999 9999999986
No 484
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=20.41 E-value=7e+02 Score=23.19 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=32.1
Q ss_pred ccCHHHHHHHHhh-cCcEEEEeeCCCCcccCC-C-----------HHHHHHHHHHhhhccCCCceEE
Q 017569 189 VMNPVKAVELVDE-NTICVAAILGSTLTGEFE-D-----------VKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 189 ~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~-~-----------l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
-.|++.+++.+.+ +|.+|+-++.-|..-..+ + ...|+++|++. |.+++
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lV 96 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV------GARLV 96 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEE
Confidence 3467889998876 577777666655544442 2 23578899998 76554
No 485
>PRK06381 threonine synthase; Validated
Probab=20.36 E-value=4.4e+02 Score=24.61 Aligned_cols=52 Identities=15% Similarity=-0.084 Sum_probs=34.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+... | -+..|++|...-..-.+.++.+|++++.++-
T Consensus 66 lv~aSsGN~g~alA~~aa~~---------G---~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~ 117 (319)
T PRK06381 66 ITVGTCGNYGASIAYFARLY---------G---LKAVIFIPRSYSNSRVKEMEKYGAEIIYVDG 117 (319)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44456666666666555432 1 1347888876655666778889999988873
No 486
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=20.36 E-value=5.7e+02 Score=22.11 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=47.6
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC---------CcchHHHHHhhhcceeEEEeccCC--cc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN---------VQVCWEKFARYFEVELKEVKLEEG--YY 188 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~---------~h~s~~~~~~~~G~~v~~v~~~~~--~~ 188 (369)
.+.-|||..+.+++.++... |.....-.+..+.. ........++.+|++...++++.+ ++
T Consensus 3 ~v~~SGGkDS~~al~~a~~~---------G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e~~ 73 (194)
T cd01994 3 VALISGGKDSCYALYRALEE---------GHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEEDE 73 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc---------CCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCchHH
Confidence 56779999999777666532 21100001111211 112355667788999888876431 12
Q ss_pred ccCHHHHHHHHhhcC--cEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 189 VMNPVKAVELVDENT--ICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 189 ~~d~~~L~~~i~~~~--~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
. +.|.+.+.+-. -+=.+..|.+..- .--..+-++|++.
T Consensus 74 ~---~~l~~~l~~~~~~g~~~vv~G~i~sd--~~~~~~e~~~~~~ 113 (194)
T cd01994 74 V---EDLKELLRKLKEEGVDAVVFGAILSE--YQRTRVERVCERL 113 (194)
T ss_pred H---HHHHHHHHHHHHcCCCEEEECccccH--HHHHHHHHHHHHc
Confidence 2 44444443311 1112233433311 1134566788877
No 487
>TIGR00679 hpr-ser Hpr(Ser) kinase/phosphatase. The hprK gene of Enterococcus faecalis encodes a bifunctional enzyme: the HPr kinase/phosphatase
Probab=20.18 E-value=2e+02 Score=27.10 Aligned_cols=25 Identities=12% Similarity=-0.102 Sum_probs=14.3
Q ss_pred hcCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 201 ENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
.++.+++++.+..+ -+++.++|+++
T Consensus 81 ~~~P~iIvt~~~~~------p~~l~~~a~~~ 105 (304)
T TIGR00679 81 LNPPAIILSKSFTD------PTVLLQVNETY 105 (304)
T ss_pred CCCCEEEEECcCCC------CHHHHHHHHHh
Confidence 35666666665444 25556666665
No 488
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=20.08 E-value=5.3e+02 Score=24.71 Aligned_cols=20 Identities=20% Similarity=-0.002 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeec
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
-+.+.++.++++ +++++.||
T Consensus 201 AV~~~a~~a~~~------gvpiIADG 220 (346)
T PRK05096 201 AVIECADAAHGL------GGQIVSDG 220 (346)
T ss_pred HHHHHHHHHHHc------CCCEEecC
Confidence 356666777777 99999997
No 489
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=20.03 E-value=2.5e+02 Score=19.46 Aligned_cols=65 Identities=12% Similarity=0.015 Sum_probs=32.9
Q ss_pred eEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHHHHHhhcC-cEEEEeeCCCCcccCCCHHHH
Q 017569 156 NIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENT-ICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 156 ~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~-~~v~~~~~~~~tG~~~~l~~I 224 (369)
.++++.+..+...++. +..|+....++++.+ .-..+++.+.....+ ..|+ . ....-|..+++.++
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~--~~~~~el~~~~g~~~vP~v~-i-~~~~iGg~~~~~~~ 71 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIF--PERKAELEERTGSSVVPQIF-F-NEKLVGGLTDLKSL 71 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHhCCCCcCEEE-E-CCEEEeCHHHHHhh
Confidence 4455555555544444 445888888888753 112234444433322 2222 2 33455666666554
Done!