Query 017569
Match_columns 369
No_of_seqs 216 out of 2782
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 16:32:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbx_A GAD 1, glutamate decarb 100.0 1.6E-50 5.4E-55 404.7 36.3 363 1-363 1-365 (502)
2 2dgk_A GAD-beta, GADB, glutama 100.0 5.6E-46 1.9E-50 367.0 34.1 346 16-362 2-349 (452)
3 4e1o_A HDC, histidine decarbox 100.0 7.8E-44 2.7E-48 354.5 31.5 329 21-362 41-402 (481)
4 3k40_A Aromatic-L-amino-acid d 100.0 9.2E-44 3.2E-48 353.3 31.6 327 22-362 37-395 (475)
5 3vp6_A Glutamate decarboxylase 100.0 4.8E-42 1.6E-46 343.9 34.2 324 23-362 58-411 (511)
6 1js3_A DDC;, DOPA decarboxylas 100.0 9.1E-41 3.1E-45 332.6 30.0 328 22-362 37-398 (486)
7 2okj_A Glutamate decarboxylase 100.0 4.3E-40 1.5E-44 329.3 33.0 325 22-362 54-408 (504)
8 2jis_A Cysteine sulfinic acid 100.0 8.4E-39 2.9E-43 320.8 33.4 323 22-362 73-423 (515)
9 2qma_A Diaminobutyrate-pyruvat 100.0 3.5E-38 1.2E-42 315.0 32.1 324 22-362 63-416 (497)
10 3mc6_A Sphingosine-1-phosphate 100.0 4E-36 1.4E-40 299.8 28.2 313 30-359 36-364 (497)
11 3f9t_A TDC, L-tyrosine decarbo 100.0 1.3E-33 4.4E-38 271.6 35.3 314 31-361 4-330 (397)
12 3mad_A Sphingosine-1-phosphate 100.0 1.6E-34 5.6E-39 289.5 29.6 318 30-362 69-399 (514)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 3.5E-32 1.2E-36 268.7 16.9 297 23-359 49-369 (456)
14 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 3.9E-32 1.3E-36 264.1 16.3 296 23-360 14-338 (450)
15 1wyu_B Glycine dehydrogenase s 100.0 3.3E-26 1.1E-30 226.9 29.6 302 30-361 40-365 (474)
16 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 2.1E-27 7.3E-32 228.3 17.8 302 23-360 32-356 (501)
17 3nnk_A Ureidoglycine-glyoxylat 99.9 6.4E-26 2.2E-30 219.5 22.6 269 55-361 11-311 (411)
18 4hvk_A Probable cysteine desul 99.9 4.2E-25 1.4E-29 211.0 25.1 261 65-362 9-278 (382)
19 3isl_A Purine catabolism prote 99.9 2.6E-25 8.8E-30 215.6 22.4 238 91-361 40-311 (416)
20 2dr1_A PH1308 protein, 386AA l 99.9 3.7E-25 1.3E-29 212.2 22.2 258 65-360 28-301 (386)
21 4eb5_A Probable cysteine desul 99.9 6.3E-25 2.2E-29 210.3 23.6 258 66-360 10-276 (382)
22 2z9v_A Aspartate aminotransfer 99.9 7E-25 2.4E-29 211.0 22.3 258 64-360 16-290 (392)
23 1vjo_A Alanine--glyoxylate ami 99.9 1E-24 3.5E-29 210.1 23.2 259 64-360 41-315 (393)
24 3lvm_A Cysteine desulfurase; s 99.9 2.7E-24 9.3E-29 209.1 26.4 264 63-360 29-304 (423)
25 2yrr_A Aminotransferase, class 99.9 8.9E-26 3E-30 213.6 14.8 257 65-360 8-275 (353)
26 1eg5_A Aminotransferase; PLP-d 99.9 1E-23 3.5E-28 201.8 28.4 259 66-360 11-280 (384)
27 2huf_A Alanine glyoxylate amin 99.9 1.5E-24 5.1E-29 208.8 22.2 258 66-361 28-304 (393)
28 3zrp_A Serine-pyruvate aminotr 99.9 2.8E-25 9.7E-30 212.7 16.3 258 65-360 10-286 (384)
29 3vax_A Putative uncharacterize 99.9 1.9E-24 6.7E-29 208.5 21.7 262 65-357 29-301 (400)
30 3kgw_A Alanine-glyoxylate amin 99.9 1.6E-24 5.6E-29 208.0 20.8 259 65-361 31-308 (393)
31 2ch1_A 3-hydroxykynurenine tra 99.9 4.7E-24 1.6E-28 205.5 22.0 257 67-361 28-303 (396)
32 1elu_A L-cysteine/L-cystine C- 99.9 3.5E-24 1.2E-28 205.6 20.5 261 65-359 25-316 (390)
33 1wyu_A Glycine dehydrogenase ( 99.9 9.9E-24 3.4E-28 206.9 24.0 306 12-359 21-363 (438)
34 3cai_A Possible aminotransfera 99.9 1.9E-24 6.4E-29 209.2 18.3 269 60-360 30-323 (406)
35 1t3i_A Probable cysteine desul 99.9 7.3E-24 2.5E-28 205.4 21.6 272 57-359 29-324 (420)
36 1kmj_A Selenocysteine lyase; p 99.9 1.6E-23 5.4E-28 202.0 20.9 270 58-360 25-321 (406)
37 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.8E-23 6E-28 199.6 20.6 253 67-360 20-289 (371)
38 1iug_A Putative aspartate amin 99.9 8.6E-24 2.9E-28 200.2 18.1 254 65-360 9-272 (352)
39 3a9z_A Selenocysteine lyase; P 99.9 6.5E-23 2.2E-27 200.2 24.7 276 60-359 22-325 (432)
40 3f0h_A Aminotransferase; RER07 99.9 1.5E-23 5.2E-28 200.5 17.8 259 65-360 27-298 (376)
41 3dzz_A Putative pyridoxal 5'-p 99.9 7.4E-23 2.5E-27 196.6 22.2 265 57-358 29-308 (391)
42 3e9k_A Kynureninase; kynurenin 99.9 2.7E-23 9.3E-28 205.2 19.5 237 92-359 108-375 (465)
43 1rv3_A Serine hydroxymethyltra 99.9 4.5E-23 1.6E-27 204.9 20.4 287 41-361 31-346 (483)
44 1m32_A 2-aminoethylphosphonate 99.9 8.6E-23 2.9E-27 194.0 21.2 259 65-361 12-287 (366)
45 1j32_A Aspartate aminotransfer 99.9 9.9E-23 3.4E-27 196.0 21.6 268 54-359 29-310 (388)
46 2bkw_A Alanine-glyoxylate amin 99.9 1.9E-23 6.5E-28 200.2 14.9 265 67-360 15-302 (385)
47 3ffr_A Phosphoserine aminotran 99.9 6.6E-23 2.2E-27 194.6 17.9 256 67-360 14-286 (362)
48 1o4s_A Aspartate aminotransfer 99.9 2.4E-22 8.1E-27 193.8 21.4 269 54-360 40-317 (389)
49 3g0t_A Putative aminotransfera 99.9 4.7E-22 1.6E-26 194.2 23.7 230 39-292 28-276 (437)
50 1gd9_A Aspartate aminotransfer 99.9 5.6E-22 1.9E-26 190.7 22.5 269 58-360 29-309 (389)
51 1qz9_A Kynureninase; kynurenin 99.9 5.3E-22 1.8E-26 192.5 21.5 259 66-359 38-324 (416)
52 1u08_A Hypothetical aminotrans 99.9 9.4E-22 3.2E-26 189.1 22.9 269 58-361 33-311 (386)
53 3e77_A Phosphoserine aminotran 99.9 6.4E-23 2.2E-27 196.8 14.1 261 62-360 18-293 (377)
54 2o0r_A RV0858C (N-succinyldiam 99.9 5.6E-22 1.9E-26 192.5 20.3 269 58-360 28-307 (411)
55 3h14_A Aminotransferase, class 99.9 3.3E-21 1.1E-25 185.7 25.4 281 40-362 17-305 (391)
56 1xi9_A Putative transaminase; 99.9 1.2E-21 4.2E-26 189.7 22.5 271 54-360 37-324 (406)
57 3b46_A Aminotransferase BNA3; 99.9 2.6E-22 9E-27 197.3 17.6 274 54-361 56-352 (447)
58 3ele_A Amino transferase; RER0 99.9 5.8E-22 2E-26 191.2 19.6 213 57-293 37-265 (398)
59 1b5p_A Protein (aspartate amin 99.9 2.6E-21 8.9E-26 186.3 24.0 266 55-360 31-311 (385)
60 4dq6_A Putative pyridoxal phos 99.9 1.2E-21 4.1E-26 188.2 20.4 265 56-358 33-312 (391)
61 2gb3_A Aspartate aminotransfer 99.9 5.1E-22 1.8E-26 192.7 18.0 263 58-361 46-319 (409)
62 2x5d_A Probable aminotransfera 99.9 3.7E-21 1.3E-25 186.7 23.9 273 53-360 35-319 (412)
63 3dyd_A Tyrosine aminotransfera 99.9 2.5E-21 8.5E-26 189.2 22.8 273 56-360 55-344 (427)
64 3qm2_A Phosphoserine aminotran 99.9 2.4E-23 8.2E-28 200.6 8.2 262 61-362 31-310 (386)
65 1v2d_A Glutamine aminotransfer 99.9 1.4E-21 4.8E-26 187.5 20.2 261 59-361 29-299 (381)
66 2z61_A Probable aspartate amin 99.9 4.6E-21 1.6E-25 183.3 23.7 262 54-360 28-297 (370)
67 1svv_A Threonine aldolase; str 99.9 2.3E-21 7.7E-26 183.8 21.0 251 65-360 23-288 (359)
68 3nra_A Aspartate aminotransfer 99.9 8.5E-22 2.9E-26 190.4 18.1 267 58-362 42-329 (407)
69 3ke3_A Putative serine-pyruvat 99.9 2.3E-21 7.8E-26 186.5 20.6 236 90-361 30-296 (379)
70 3l8a_A METC, putative aminotra 99.9 1.9E-21 6.7E-26 189.4 19.9 270 56-359 62-343 (421)
71 2a7v_A Serine hydroxymethyltra 99.9 1.8E-21 6E-26 192.9 19.2 281 42-361 42-356 (490)
72 3frk_A QDTB; aminotransferase, 99.9 5.5E-22 1.9E-26 190.0 15.1 248 69-360 16-268 (373)
73 3ju7_A Putative PLP-dependent 99.9 3.3E-21 1.1E-25 185.5 20.5 251 68-361 14-273 (377)
74 3a2b_A Serine palmitoyltransfe 99.9 1.8E-21 6.3E-26 187.8 17.9 257 58-361 46-316 (398)
75 1b9h_A AHBA synthase, protein 99.9 1E-20 3.5E-25 181.9 22.9 250 69-360 16-274 (388)
76 2fnu_A Aminotransferase; prote 99.9 1.9E-21 6.4E-26 185.8 17.4 252 65-360 8-268 (375)
77 3ly1_A Putative histidinol-pho 99.9 8.5E-21 2.9E-25 180.0 21.7 254 58-360 19-284 (354)
78 3kax_A Aminotransferase, class 99.9 3.5E-21 1.2E-25 184.4 19.1 263 57-358 26-304 (383)
79 1yiz_A Kynurenine aminotransfe 99.9 4.7E-21 1.6E-25 186.9 20.3 270 58-361 40-337 (429)
80 3nyt_A Aminotransferase WBPE; 99.9 1.4E-21 4.9E-26 186.9 16.0 248 69-360 15-267 (367)
81 1c7n_A Cystalysin; transferase 99.9 6.1E-21 2.1E-25 184.1 20.4 266 58-360 34-315 (399)
82 1bw0_A TAT, protein (tyrosine 99.9 8.2E-21 2.8E-25 184.3 21.4 270 58-359 36-332 (416)
83 3cq5_A Histidinol-phosphate am 99.9 4.4E-20 1.5E-24 176.6 25.5 250 67-360 43-302 (369)
84 3uwc_A Nucleotide-sugar aminot 99.9 1.1E-21 3.7E-26 187.6 13.9 259 56-361 7-270 (374)
85 3get_A Histidinol-phosphate am 99.9 1.3E-20 4.5E-25 179.6 21.4 258 57-361 32-299 (365)
86 3dr4_A Putative perosamine syn 99.9 1.7E-21 5.9E-26 187.7 15.2 248 70-360 36-289 (391)
87 3fdb_A Beta C-S lyase, putativ 99.9 9.7E-21 3.3E-25 181.1 20.1 267 53-359 21-297 (377)
88 2dou_A Probable N-succinyldiam 99.9 1E-20 3.5E-25 181.2 19.6 270 53-359 23-303 (376)
89 3tqx_A 2-amino-3-ketobutyrate 99.9 5.5E-21 1.9E-25 184.0 17.5 249 68-361 58-320 (399)
90 1d2f_A MALY protein; aminotran 99.9 2.2E-20 7.4E-25 179.8 21.2 255 67-358 41-308 (390)
91 2o1b_A Aminotransferase, class 99.9 8.5E-21 2.9E-25 184.0 18.3 267 58-360 50-327 (404)
92 1v72_A Aldolase; PLP-dependent 99.9 4.8E-21 1.6E-25 181.5 15.7 255 59-359 11-283 (356)
93 3fvs_A Kynurenine--oxoglutarat 99.9 8.7E-21 3E-25 184.4 17.8 271 56-361 29-329 (422)
94 3e2y_A Kynurenine-oxoglutarate 99.9 1.3E-20 4.5E-25 182.3 18.9 273 57-361 25-322 (410)
95 2zc0_A Alanine glyoxylate tran 99.9 3.1E-20 1.1E-24 179.6 21.5 210 56-291 35-261 (407)
96 3jtx_A Aminotransferase; NP_28 99.9 1.8E-20 6.2E-25 180.5 19.5 272 54-359 29-317 (396)
97 2w8t_A SPT, serine palmitoyltr 99.9 5.2E-20 1.8E-24 179.8 22.7 247 68-361 79-337 (427)
98 2c0r_A PSAT, phosphoserine ami 99.9 1.2E-20 4E-25 179.9 17.6 252 65-360 12-283 (362)
99 3euc_A Histidinol-phosphate am 99.9 2.1E-20 7.1E-25 178.3 18.7 258 58-362 33-299 (367)
100 2oga_A Transaminase; PLP-depen 99.8 1.7E-20 5.7E-25 181.5 18.0 246 70-359 44-294 (399)
101 2rfv_A Methionine gamma-lyase; 99.8 2.6E-20 8.7E-25 180.2 18.7 217 94-363 63-286 (398)
102 3ffh_A Histidinol-phosphate am 99.8 8.9E-20 3.1E-24 173.7 21.9 258 57-360 34-297 (363)
103 2vyc_A Biodegradative arginine 99.8 2.5E-20 8.6E-25 193.9 19.2 226 98-361 208-466 (755)
104 1bs0_A Protein (8-amino-7-oxon 99.8 4.9E-20 1.7E-24 176.8 19.8 248 68-360 54-310 (384)
105 2dkj_A Serine hydroxymethyltra 99.8 2.2E-20 7.5E-25 180.4 17.5 278 40-361 9-302 (407)
106 2c81_A Glutamine-2-deoxy-scyll 99.8 1.7E-20 5.7E-25 182.5 16.6 191 69-293 15-207 (418)
107 3n0l_A Serine hydroxymethyltra 99.8 7.1E-20 2.4E-24 177.4 21.0 252 68-361 37-303 (417)
108 4f4e_A Aromatic-amino-acid ami 99.8 5.8E-20 2E-24 178.9 20.2 214 57-290 51-283 (420)
109 1vp4_A Aminotransferase, putat 99.8 3.9E-20 1.3E-24 180.4 18.9 262 58-359 46-334 (425)
110 1e5e_A MGL, methionine gamma-l 99.8 2.7E-20 9.3E-25 180.7 17.7 212 98-363 65-285 (404)
111 2po3_A 4-dehydrase; external a 99.8 8.8E-20 3E-24 177.9 21.2 254 60-359 21-280 (424)
112 3m5u_A Phosphoserine aminotran 99.8 3.2E-21 1.1E-25 184.2 10.2 257 62-362 10-283 (361)
113 2vi8_A Serine hydroxymethyltra 99.8 4.7E-20 1.6E-24 178.0 18.6 250 69-361 36-301 (405)
114 2x3l_A ORN/Lys/Arg decarboxyla 99.8 6E-21 2E-25 187.8 12.1 219 96-355 58-283 (446)
115 1mdo_A ARNB aminotransferase; 99.8 6.2E-20 2.1E-24 176.6 18.9 246 69-360 19-281 (393)
116 3kki_A CAI-1 autoinducer synth 99.8 8.3E-20 2.8E-24 177.0 19.9 248 68-361 74-329 (409)
117 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.3E-19 4.6E-24 174.5 21.3 257 67-360 12-290 (390)
118 3tcm_A Alanine aminotransferas 99.8 1.9E-19 6.3E-24 179.6 22.8 200 70-291 109-333 (500)
119 3op7_A Aminotransferase class 99.8 7.2E-20 2.5E-24 175.1 18.8 244 75-362 47-298 (375)
120 3ftb_A Histidinol-phosphate am 99.8 1.3E-19 4.6E-24 172.1 20.3 252 58-362 29-289 (361)
121 1fc4_A 2-amino-3-ketobutyrate 99.8 5.6E-20 1.9E-24 177.5 17.9 256 58-360 48-320 (401)
122 3aow_A Putative uncharacterize 99.8 1.5E-19 5E-24 177.9 21.0 209 58-291 79-303 (448)
123 1o69_A Aminotransferase; struc 99.8 1.1E-19 3.8E-24 175.5 19.7 247 70-359 12-266 (394)
124 2cb1_A O-acetyl homoserine sul 99.8 2.5E-19 8.7E-24 174.2 22.2 224 96-363 57-304 (412)
125 3qhx_A Cystathionine gamma-syn 99.8 9E-20 3.1E-24 176.4 18.7 213 97-364 68-288 (392)
126 1gc0_A Methionine gamma-lyase; 99.8 4.9E-20 1.7E-24 178.4 16.8 215 95-364 65-288 (398)
127 3piu_A 1-aminocyclopropane-1-c 99.8 1.3E-19 4.4E-24 177.2 19.7 275 53-361 34-350 (435)
128 3acz_A Methionine gamma-lyase; 99.8 1E-19 3.4E-24 175.8 18.3 215 97-366 61-283 (389)
129 3ndn_A O-succinylhomoserine su 99.8 1.3E-19 4.6E-24 176.4 19.2 214 96-364 82-303 (414)
130 3ezs_A Aminotransferase ASPB; 99.8 3E-19 1E-23 170.7 21.3 265 56-357 24-301 (376)
131 3jzl_A Putative cystathionine 99.8 4E-20 1.4E-24 179.6 15.3 216 98-361 62-303 (409)
132 1w23_A Phosphoserine aminotran 99.8 2.1E-20 7.2E-25 177.6 12.4 255 67-360 13-282 (360)
133 1c4k_A Protein (ornithine deca 99.8 6.4E-20 2.2E-24 189.5 16.7 228 98-358 176-437 (730)
134 1iay_A ACC synthase 2, 1-amino 99.8 2.7E-19 9.4E-24 174.4 20.4 234 91-361 83-345 (428)
135 1lc5_A COBD, L-threonine-O-3-p 99.8 6.9E-19 2.4E-23 167.8 22.3 252 58-360 27-288 (364)
136 3qgu_A LL-diaminopimelate amin 99.8 1.8E-18 6.2E-23 169.6 25.7 285 40-361 53-366 (449)
137 3p1t_A Putative histidinol-pho 99.8 1.5E-18 5.1E-23 163.2 23.9 238 67-361 29-270 (337)
138 3rq1_A Aminotransferase class 99.8 1.1E-19 3.7E-24 176.6 16.5 212 56-290 39-276 (418)
139 3ri6_A O-acetylhomoserine sulf 99.8 1.8E-19 6.1E-24 176.2 17.9 222 99-364 86-324 (430)
140 2fq6_A Cystathionine beta-lyas 99.8 1.9E-19 6.3E-24 175.4 17.8 211 98-364 85-305 (415)
141 3fsl_A Aromatic-amino-acid ami 99.8 1.8E-19 6.3E-24 173.5 17.6 203 69-291 46-262 (397)
142 2zyj_A Alpha-aminodipate amino 99.8 1.4E-19 4.7E-24 174.7 16.6 255 58-359 35-311 (397)
143 3i16_A Aluminum resistance pro 99.8 1.7E-19 5.8E-24 175.9 17.0 216 99-361 77-320 (427)
144 1qgn_A Protein (cystathionine 99.8 9.7E-19 3.3E-23 171.6 21.8 211 96-362 115-334 (445)
145 3t18_A Aminotransferase class 99.8 3.1E-19 1.1E-23 173.1 17.9 271 57-361 39-348 (413)
146 1jg8_A L-ALLO-threonine aldola 99.8 4E-20 1.4E-24 174.9 11.0 185 65-284 13-210 (347)
147 3ecd_A Serine hydroxymethyltra 99.8 5.9E-19 2E-23 171.2 19.5 253 68-361 44-311 (425)
148 1ajs_A Aspartate aminotransfer 99.8 6.1E-19 2.1E-23 170.9 18.8 283 54-360 29-345 (412)
149 1ibj_A CBL, cystathionine beta 99.8 7.2E-19 2.5E-23 173.6 18.5 215 96-365 134-355 (464)
150 3gbx_A Serine hydroxymethyltra 99.8 1E-18 3.6E-23 169.2 18.9 252 68-361 42-310 (420)
151 3hvy_A Cystathionine beta-lyas 99.8 4.1E-19 1.4E-23 173.2 15.5 216 98-361 77-320 (427)
152 3hdo_A Histidinol-phosphate am 99.8 1E-18 3.5E-23 166.3 18.0 250 59-361 30-286 (360)
153 3ei9_A LL-diaminopimelate amin 99.8 3.4E-18 1.2E-22 166.8 21.9 280 39-361 39-354 (432)
154 2r2n_A Kynurenine/alpha-aminoa 99.8 5.3E-18 1.8E-22 165.3 23.1 241 86-359 73-340 (425)
155 3cog_A Cystathionine gamma-lya 99.8 7.3E-19 2.5E-23 170.6 16.9 216 91-366 67-291 (403)
156 1fg7_A Histidinol phosphate am 99.8 1.7E-18 5.7E-23 165.0 19.0 220 92-361 59-288 (356)
157 1pff_A Methionine gamma-lyase; 99.8 9.7E-19 3.3E-23 164.5 16.6 153 100-292 3-162 (331)
158 1ax4_A Tryptophanase; tryptoph 99.8 2.6E-18 8.9E-23 169.3 20.1 256 70-360 55-343 (467)
159 3n75_A LDC, lysine decarboxyla 99.8 6.2E-19 2.1E-23 181.0 16.1 223 99-360 199-443 (715)
160 2x5f_A Aspartate_tyrosine_phen 99.8 3.1E-19 1E-23 174.2 13.0 208 58-290 50-285 (430)
161 3h7f_A Serine hydroxymethyltra 99.8 3.7E-18 1.3E-22 167.8 20.6 251 67-359 56-321 (447)
162 2bwn_A 5-aminolevulinate synth 99.8 5.4E-18 1.9E-22 163.6 21.4 247 69-360 62-322 (401)
163 1cs1_A CGS, protein (cystathio 99.8 3.3E-18 1.1E-22 164.6 19.4 212 99-365 56-275 (386)
164 2q7w_A Aspartate aminotransfer 99.8 1.3E-18 4.3E-23 167.6 16.3 260 67-360 44-333 (396)
165 3meb_A Aspartate aminotransfer 99.8 4.8E-18 1.6E-22 167.0 20.6 218 51-288 44-289 (448)
166 2ctz_A O-acetyl-L-homoserine s 99.8 6.5E-18 2.2E-22 164.8 21.2 154 98-291 61-221 (421)
167 2ez2_A Beta-tyrosinase, tyrosi 99.8 3.6E-18 1.2E-22 167.8 19.5 175 86-295 70-274 (456)
168 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 6.5E-18 2.2E-22 165.4 21.1 189 69-291 42-233 (437)
169 3ihj_A Alanine aminotransferas 99.8 3.1E-18 1.1E-22 170.6 18.8 199 72-290 106-331 (498)
170 1yaa_A Aspartate aminotransfer 99.8 2.9E-18 9.9E-23 166.2 17.4 214 56-289 30-267 (412)
171 7aat_A Aspartate aminotransfer 99.8 6.4E-18 2.2E-22 163.1 19.7 220 53-291 25-265 (401)
172 1vef_A Acetylornithine/acetyl- 99.8 7.3E-18 2.5E-22 162.4 20.0 254 68-361 62-326 (395)
173 3ht4_A Aluminum resistance pro 99.8 1.9E-18 6.6E-23 169.0 16.0 220 96-361 66-309 (431)
174 2ay1_A Aroat, aromatic amino a 99.8 2.3E-18 8E-23 165.7 16.0 211 57-290 28-257 (394)
175 2aeu_A Hypothetical protein MJ 99.8 7.4E-18 2.5E-22 161.8 18.6 200 43-292 15-222 (374)
176 3g7q_A Valine-pyruvate aminotr 99.8 2.6E-18 9E-23 166.4 15.2 228 42-290 17-263 (417)
177 2fyf_A PSAT, phosphoserine ami 99.8 2.3E-18 7.9E-23 166.3 14.7 252 65-360 48-318 (398)
178 3b1d_A Betac-S lyase; HET: PLP 99.6 2.4E-20 8.2E-25 179.8 0.0 214 58-295 34-257 (392)
179 3ruy_A Ornithine aminotransfer 99.8 6E-17 2.1E-21 155.8 23.3 253 68-360 53-323 (392)
180 3if2_A Aminotransferase; YP_26 99.8 6.9E-18 2.4E-22 165.2 16.8 216 56-290 32-289 (444)
181 3f6t_A Aspartate aminotransfer 99.8 1.6E-17 5.6E-22 166.8 19.6 214 59-293 107-330 (533)
182 3nmy_A Xometc, cystathionine g 99.8 7.3E-18 2.5E-22 163.4 16.4 210 99-364 71-290 (400)
183 3ez1_A Aminotransferase MOCR f 99.8 3.3E-18 1.1E-22 166.4 13.9 212 56-292 26-268 (423)
184 3k7y_A Aspartate aminotransfer 99.8 3.2E-17 1.1E-21 159.1 20.5 215 56-290 30-263 (405)
185 3asa_A LL-diaminopimelate amin 99.8 2.9E-17 9.8E-22 158.7 19.9 219 39-292 16-252 (400)
186 3lws_A Aromatic amino acid bet 99.8 7.2E-18 2.5E-22 160.1 14.6 223 91-361 47-277 (357)
187 1uu1_A Histidinol-phosphate am 99.8 1.9E-17 6.6E-22 156.1 17.2 234 67-361 32-274 (335)
188 3ppl_A Aspartate aminotransfer 99.8 1.4E-17 4.6E-22 162.4 16.6 211 56-291 34-274 (427)
189 2eh6_A Acoat, acetylornithine 99.8 3.7E-17 1.3E-21 156.1 19.3 252 68-361 45-311 (375)
190 3pj0_A LMO0305 protein; struct 99.8 9.5E-18 3.2E-22 159.3 14.9 243 69-360 28-278 (359)
191 3fkd_A L-threonine-O-3-phospha 99.7 2.2E-17 7.4E-22 156.4 16.5 248 55-360 15-268 (350)
192 2ord_A Acoat, acetylornithine 99.7 1.1E-16 3.7E-21 154.4 21.2 247 68-359 57-321 (397)
193 4eu1_A Mitochondrial aspartate 99.7 4.5E-17 1.5E-21 157.7 18.4 278 56-361 42-346 (409)
194 1n8p_A Cystathionine gamma-lya 99.7 1.7E-17 6E-22 160.3 14.0 210 98-361 58-276 (393)
195 2oqx_A Tryptophanase; lyase, p 99.7 1E-16 3.6E-21 157.7 19.7 199 70-292 53-280 (467)
196 4adb_A Succinylornithine trans 99.7 2.8E-16 9.6E-21 151.6 19.9 248 69-359 57-322 (406)
197 3d6k_A Putative aminotransfera 99.7 2.5E-16 8.6E-21 153.3 17.7 213 57-291 34-272 (422)
198 1s0a_A Adenosylmethionine-8-am 99.7 3E-15 1E-19 145.9 23.1 262 68-359 60-350 (429)
199 3nx3_A Acoat, acetylornithine 99.7 2.6E-15 8.9E-20 144.5 21.8 194 68-292 53-263 (395)
200 2pb2_A Acetylornithine/succiny 99.7 2E-15 6.9E-20 147.0 21.0 250 68-359 74-340 (420)
201 3ou5_A Serine hydroxymethyltra 99.7 2.5E-15 8.5E-20 144.2 20.3 265 67-361 65-356 (490)
202 1sff_A 4-aminobutyrate aminotr 99.7 6E-15 2.1E-19 143.2 21.6 250 68-359 58-338 (426)
203 3i4j_A Aminotransferase, class 99.7 7.8E-15 2.7E-19 142.9 21.7 202 69-291 47-276 (430)
204 1z7d_A Ornithine aminotransfer 99.7 1.8E-14 6E-19 140.9 23.7 252 68-359 82-352 (433)
205 2eo5_A 419AA long hypothetical 99.7 1.6E-14 5.5E-19 140.4 23.3 245 69-359 61-348 (419)
206 3a8u_X Omega-amino acid--pyruv 99.6 1.7E-14 5.8E-19 141.4 23.0 264 69-360 68-369 (449)
207 2oat_A Ornithine aminotransfer 99.6 1.3E-14 4.5E-19 142.1 21.5 253 68-360 93-364 (439)
208 3n5m_A Adenosylmethionine-8-am 99.6 3E-14 1E-18 139.8 24.0 201 68-292 66-300 (452)
209 3dxv_A Alpha-amino-epsilon-cap 99.6 2.2E-14 7.7E-19 140.1 21.6 198 68-292 60-285 (439)
210 3fq8_A Glutamate-1-semialdehyd 99.6 4.5E-14 1.5E-18 137.4 22.8 245 68-359 69-340 (427)
211 4h51_A Aspartate aminotransfer 99.6 5.4E-15 1.8E-19 143.8 16.1 233 41-293 31-282 (420)
212 2zy4_A L-aspartate beta-decarb 99.6 1.6E-15 5.3E-20 152.7 12.3 216 58-293 107-332 (546)
213 3l44_A Glutamate-1-semialdehyd 99.6 4.9E-14 1.7E-18 137.4 21.7 249 68-358 72-342 (434)
214 3hmu_A Aminotransferase, class 99.6 7E-14 2.4E-18 138.2 22.5 261 68-359 72-366 (472)
215 4a6r_A Omega transaminase; tra 99.6 2.8E-14 9.7E-19 140.4 19.0 204 68-292 67-304 (459)
216 3dod_A Adenosylmethionine-8-am 99.6 1.9E-13 6.4E-18 134.1 24.6 203 68-292 61-296 (448)
217 3gju_A Putative aminotransfera 99.6 7.8E-14 2.7E-18 137.3 21.6 205 68-292 68-306 (460)
218 3i5t_A Aminotransferase; pyrid 99.6 8.5E-14 2.9E-18 137.8 21.3 267 68-360 71-370 (476)
219 1zod_A DGD, 2,2-dialkylglycine 99.6 6.5E-14 2.2E-18 136.5 20.2 253 69-359 61-344 (433)
220 2cjg_A L-lysine-epsilon aminot 99.6 1.6E-13 5.5E-18 134.7 22.5 264 68-359 71-371 (449)
221 3k28_A Glutamate-1-semialdehyd 99.6 1.2E-13 4.1E-18 134.6 21.4 193 68-292 70-283 (429)
222 3tfu_A Adenosylmethionine-8-am 99.6 5.2E-14 1.8E-18 138.6 18.9 263 68-360 92-380 (457)
223 2epj_A Glutamate-1-semialdehyd 99.6 1.8E-13 6.2E-18 133.5 21.7 245 68-359 73-344 (434)
224 3bwn_A AT1G70560, L-tryptophan 99.6 1.8E-14 6.2E-19 138.9 13.9 250 57-360 24-302 (391)
225 2cy8_A D-phgat, D-phenylglycin 99.6 9.8E-14 3.4E-18 136.2 19.1 246 68-359 74-344 (453)
226 4ffc_A 4-aminobutyrate aminotr 99.6 2.4E-13 8.3E-18 133.6 21.5 199 68-292 81-309 (453)
227 3oks_A 4-aminobutyrate transam 99.5 1E-12 3.5E-17 129.1 24.0 198 68-292 78-311 (451)
228 4e77_A Glutamate-1-semialdehyd 99.5 1.1E-12 3.8E-17 127.7 24.0 243 68-358 70-340 (429)
229 2e7u_A Glutamate-1-semialdehyd 99.5 1.8E-12 6E-17 126.0 21.6 243 68-359 69-340 (424)
230 2hox_A ALLIIN lyase 1; cystein 99.4 4.3E-13 1.5E-17 130.8 9.6 194 58-294 59-269 (427)
231 1ohv_A 4-aminobutyrate aminotr 99.4 1.1E-11 3.7E-16 122.5 18.3 256 68-359 80-394 (472)
232 2yky_A Beta-transaminase; tran 98.9 4.3E-13 1.5E-17 132.0 0.0 247 68-359 117-375 (465)
233 4ao9_A Beta-phenylalanine amin 99.2 2.5E-09 8.7E-14 104.6 21.5 247 67-358 103-360 (454)
234 4e3q_A Pyruvate transaminase; 98.9 8.6E-08 3E-12 94.3 21.6 268 67-359 83-383 (473)
235 4atq_A 4-aminobutyrate transam 98.8 1.3E-06 4.3E-11 85.6 25.4 254 67-358 80-364 (456)
236 4a0g_A Adenosylmethionine-8-am 98.1 4.2E-05 1.4E-09 80.2 14.7 205 69-292 399-680 (831)
237 4fgs_A Probable dehydrogenase 57.9 39 0.0013 29.9 8.4 84 120-219 31-120 (273)
238 4g81_D Putative hexonate dehyd 48.5 1.2E+02 0.004 26.4 9.9 83 120-218 11-102 (255)
239 3vc3_A Beta-cyanoalnine syntha 46.0 23 0.00078 32.5 5.0 54 119-184 89-142 (344)
240 3grp_A 3-oxoacyl-(acyl carrier 45.4 1.3E+02 0.0044 25.9 9.8 83 120-218 29-117 (266)
241 3m0z_A Putative aldolase; MCSG 41.5 87 0.003 26.9 7.4 71 164-249 144-223 (249)
242 3l6u_A ABC-type sugar transpor 38.6 1.3E+02 0.0046 25.6 8.9 77 157-245 13-97 (293)
243 3kts_A Glycerol uptake operon 38.6 20 0.00069 30.0 3.0 49 191-248 18-66 (192)
244 3rpc_A Possible metal-dependen 37.4 1.9E+02 0.0066 24.6 10.5 77 155-231 161-247 (264)
245 4dqx_A Probable oxidoreductase 35.1 2.2E+02 0.0075 24.5 11.3 83 120-218 29-117 (277)
246 3rwb_A TPLDH, pyridoxal 4-dehy 34.7 2.1E+02 0.007 24.1 10.7 83 120-218 8-96 (247)
247 3dwg_A Cysteine synthase B; su 33.2 51 0.0017 29.8 5.1 53 120-184 76-128 (325)
248 3m9w_A D-xylose-binding peripl 32.7 1.7E+02 0.0058 25.3 8.6 67 167-245 24-91 (313)
249 3ff4_A Uncharacterized protein 32.6 47 0.0016 25.4 4.1 43 192-248 72-114 (122)
250 3gi1_A LBP, laminin-binding pr 32.4 2.6E+02 0.0088 24.5 11.7 72 155-242 180-255 (286)
251 3gvc_A Oxidoreductase, probabl 32.4 2.4E+02 0.0083 24.2 11.1 83 120-218 31-119 (277)
252 2o1e_A YCDH; alpha-beta protei 32.1 2.5E+02 0.0086 25.0 9.6 71 155-241 191-265 (312)
253 3uug_A Multiple sugar-binding 31.6 1.8E+02 0.0061 25.4 8.6 67 167-245 25-92 (330)
254 4gqr_A Pancreatic alpha-amylas 31.5 22 0.00074 33.8 2.4 33 211-249 69-101 (496)
255 3m6y_A 4-hydroxy-2-oxoglutarat 31.5 1.2E+02 0.0041 26.4 6.6 70 165-249 168-246 (275)
256 3kbq_A Protein TA0487; structu 31.1 2E+02 0.0068 23.3 7.9 54 166-224 27-83 (172)
257 4aec_A Cysteine synthase, mito 30.0 79 0.0027 29.9 6.0 53 120-184 178-230 (430)
258 3tbh_A O-acetyl serine sulfhyd 29.9 71 0.0024 28.9 5.6 52 121-184 76-127 (334)
259 2q3b_A Cysteine synthase A; py 29.1 73 0.0025 28.4 5.4 53 120-184 70-122 (313)
260 3mfq_A TROA, high-affinity zin 27.3 62 0.0021 28.6 4.5 69 163-242 169-242 (282)
261 3rd5_A Mypaa.01249.C; ssgcid, 27.1 3E+02 0.01 23.6 9.5 78 120-213 18-97 (291)
262 1y5e_A Molybdenum cofactor bio 27.0 2.3E+02 0.0077 22.6 7.6 53 167-224 36-93 (169)
263 2is8_A Molybdopterin biosynthe 27.0 1.7E+02 0.006 23.2 6.9 55 165-224 24-83 (164)
264 4h27_A L-serine dehydratase/L- 26.6 1.8E+02 0.0062 26.5 7.8 52 120-183 96-147 (364)
265 1j0a_A 1-aminocyclopropane-1-c 26.5 95 0.0032 27.8 5.7 30 155-184 98-128 (325)
266 2prs_A High-affinity zinc upta 26.3 2.7E+02 0.0094 24.2 8.7 51 156-210 176-231 (284)
267 2pjk_A 178AA long hypothetical 25.8 2E+02 0.0069 23.3 7.2 55 165-224 43-102 (178)
268 2yxb_A Coenzyme B12-dependent 25.4 1.5E+02 0.0053 23.5 6.3 82 154-245 18-107 (161)
269 4e6p_A Probable sorbitol dehyd 25.3 3.1E+02 0.01 23.1 11.1 83 120-218 10-98 (259)
270 1g94_A Alpha-amylase; beta-alp 25.1 32 0.0011 32.6 2.3 33 211-249 57-89 (448)
271 1y80_A Predicted cobalamin bin 24.7 2E+02 0.0069 23.7 7.2 71 167-246 108-179 (210)
272 3cx3_A Lipoprotein; zinc-bindi 24.4 3.5E+02 0.012 23.5 9.1 65 156-231 179-248 (284)
273 3l49_A ABC sugar (ribose) tran 24.4 2.1E+02 0.0072 24.2 7.6 58 168-231 28-85 (291)
274 2rkb_A Serine dehydratase-like 24.3 2.4E+02 0.0083 24.9 8.1 51 120-182 57-107 (318)
275 1y7l_A O-acetylserine sulfhydr 24.1 92 0.0031 27.8 5.1 53 120-184 65-117 (316)
276 1tks_A 3,4-dihydroxy-2-butanon 24.0 1.4E+02 0.0048 25.1 5.8 35 202-242 159-193 (204)
277 1iuk_A Hypothetical protein TT 23.9 85 0.0029 24.4 4.3 42 195-249 87-128 (140)
278 3g1w_A Sugar ABC transporter; 23.3 3.4E+02 0.012 23.0 8.8 68 167-245 26-94 (305)
279 1v71_A Serine racemase, hypoth 23.0 1.1E+02 0.0037 27.4 5.4 53 120-184 77-129 (323)
280 2pqm_A Cysteine synthase; OASS 23.0 1.1E+02 0.0037 27.8 5.4 53 120-184 81-133 (343)
281 3guy_A Short-chain dehydrogena 22.6 3.2E+02 0.011 22.4 10.0 60 155-218 26-88 (230)
282 3bh4_A Alpha-amylase; calcium, 22.5 42 0.0014 32.1 2.6 33 211-249 71-103 (483)
283 3l6e_A Oxidoreductase, short-c 22.4 3.3E+02 0.011 22.5 11.0 83 120-218 5-93 (235)
284 8abp_A L-arabinose-binding pro 22.3 3.3E+02 0.011 23.1 8.5 65 167-244 24-89 (306)
285 3ss7_X D-serine dehydratase; t 22.3 1.5E+02 0.0052 27.9 6.5 53 119-183 162-214 (442)
286 1ud2_A Amylase, alpha-amylase; 22.2 44 0.0015 31.9 2.7 33 211-249 73-105 (480)
287 2d59_A Hypothetical protein PH 22.2 1.1E+02 0.0039 23.7 4.8 45 192-249 91-135 (144)
288 3m1a_A Putative dehydrogenase; 22.1 3.6E+02 0.012 22.8 10.7 82 120-217 7-94 (281)
289 1z7w_A Cysteine synthase; tran 21.9 1.4E+02 0.0049 26.6 6.0 53 120-184 70-122 (322)
290 1wpc_A Glucan 1,4-alpha-maltoh 21.8 45 0.0015 31.9 2.7 33 211-249 75-107 (485)
291 3rot_A ABC sugar transporter, 21.7 2.5E+02 0.0084 24.0 7.5 65 167-242 25-90 (297)
292 4es6_A Uroporphyrinogen-III sy 21.5 59 0.002 27.9 3.1 62 153-214 5-70 (254)
293 1mxg_A Alpha amylase; hyperthe 21.4 47 0.0016 31.4 2.7 32 212-249 80-111 (435)
294 3rfq_A Pterin-4-alpha-carbinol 21.4 2E+02 0.0068 23.6 6.3 54 165-223 52-109 (185)
295 1hvx_A Alpha-amylase; hydrolas 21.3 47 0.0016 32.2 2.7 32 212-249 75-106 (515)
296 3tpc_A Short chain alcohol deh 21.2 3.6E+02 0.012 22.5 9.9 81 120-216 9-95 (257)
297 1lwj_A 4-alpha-glucanotransfer 21.2 45 0.0015 31.4 2.5 32 211-248 62-93 (441)
298 3tzq_B Short-chain type dehydr 21.1 3.8E+02 0.013 22.7 8.6 78 120-213 13-96 (271)
299 2i9s_A MESD, mesoderm developm 21.1 1E+02 0.0035 22.6 3.8 79 191-278 4-94 (97)
300 1gcy_A Glucan 1,4-alpha-maltot 21.0 44 0.0015 32.5 2.4 31 213-249 87-117 (527)
301 4eso_A Putative oxidoreductase 21.0 3.7E+02 0.013 22.6 10.6 83 120-218 10-98 (255)
302 2guy_A Alpha-amylase A; (beta- 20.4 45 0.0015 31.8 2.3 33 210-248 89-121 (478)
303 4aie_A Glucan 1,6-alpha-glucos 20.4 47 0.0016 32.1 2.5 32 211-248 72-103 (549)
304 4fn4_A Short chain dehydrogena 20.3 4.1E+02 0.014 22.7 9.9 78 120-213 9-95 (254)
305 2e18_A NH(3)-dependent NAD(+) 20.2 3.3E+02 0.011 23.1 7.9 75 93-184 6-84 (257)
306 2v03_A Cysteine synthase B; py 20.2 1.7E+02 0.0059 25.8 6.1 53 120-184 64-116 (303)
307 3ai3_A NADPH-sorbose reductase 20.1 3.9E+02 0.013 22.4 9.1 39 175-217 56-100 (263)
No 1
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-50 Score=404.68 Aligned_cols=363 Identities=80% Similarity=1.294 Sum_probs=315.5
Q ss_pred CCcccccCCCcccccccccchhHhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHh
Q 017569 1 MVISTTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI 80 (369)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~ 80 (369)
||++.+.++....+++.|+..++...+|++.+|+.+.+.+++++.+++.+.+++||.+|+.+++++++++.+.+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l~gnp~~~l~s~~t~~~~~~v~~~l~~~~ 80 (502)
T 3hbx_A 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSI 80 (502)
T ss_dssp -----------CCCSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGGSCCGGGBTTCCSCCCCCHHHHHHHHHTT
T ss_pred CCcccccCCCcccccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhccCCCCCceeccccCCCCCHHHHHHHHHHh
Confidence 78999889999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec
Q 017569 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG 160 (369)
Q Consensus 81 ~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s 160 (369)
+.+..+|..+|...++|+++++|+++++|++.+++....+++|+||++||++++++++.++..+++..|.+..+++|+++
T Consensus 81 ~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~ 160 (502)
T 3hbx_A 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTG 160 (502)
T ss_dssp TCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEE
T ss_pred ccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEc
Confidence 99988888899999999999999999999983222345678899999999999999988877766666766666799999
Q ss_pred CCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 161 ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 161 ~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
.++|+++.++++.+|++++.||++++++.+|+++|+++|+++|++|+++.|+|++|.++|+++|+++|++++++++.++|
T Consensus 161 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~ 240 (502)
T 3hbx_A 161 ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240 (502)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCC
T ss_pred CCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCe
Confidence 99999999999999999999999876699999999999999999999999999999999999999999998777777999
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCc
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr 320 (369)
+|||+||++++.|++.+..+.++...++|++++++|||+++|.|+|++++++++.+...+.....|+++....++++++|
T Consensus 241 l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr 320 (502)
T 3hbx_A 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSK 320 (502)
T ss_dssp EEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSC
T ss_pred EEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCc
Confidence 99999999988777777767777778999999999999999999999999987766555556678887765566778999
Q ss_pred chhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 321 GSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 321 ~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
++..++++|++++.+|.+|+.++ ++.+++++|++.|+++|.|+
T Consensus 321 ~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (502)
T 3hbx_A 321 GSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFN 365 (502)
T ss_dssp BSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 98889999999999999999888 99999999999999998543
No 2
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=5.6e-46 Score=366.98 Aligned_cols=346 Identities=47% Similarity=0.849 Sum_probs=277.6
Q ss_pred ccccchhHhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHH
Q 017569 16 STFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTE 95 (369)
Q Consensus 16 ~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~ 95 (369)
+.|+.......+.+..+|+.|.+.+++++.+.+....++.+..|+..|+++++++.+.+++.++++.+..+|..+++..+
T Consensus 2 ~~~~~~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 2 SRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp -------------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred CcccchHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCCchHHHHHHHHHHhccCCCChhhChhHHH
Confidence 45677776667777789999999999999999988666655556666666666788999999999988888888999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhc
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G 175 (369)
+|+++++|+++++|++.++.....+++|+|||+|++++++++++.+..++..+|.+.++++|++++ +|+++.++++.+|
T Consensus 82 l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G 160 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWD 160 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcC
Confidence 999999999999999862100124899999999999999998876554444455333346899999 9999999999999
Q ss_pred ceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 176 VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
++++.||++++++.+|+++|+++|+++|++|++++|+|+||.++|+++|+++|++++++++.++|+|||+||+++..||+
T Consensus 161 ~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~ 240 (452)
T 2dgk_A 161 VELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFV 240 (452)
T ss_dssp CEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHH
T ss_pred ceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhh
Confidence 99999999864599999999999999999999999999999999999999999995433333999999999999877666
Q ss_pred CCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh
Q 017569 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (369)
Q Consensus 256 ~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l 335 (369)
.+..+.++...++|++++++|||+++|+++|+++++++..+...+...+.|+++...+++++++|++..++++|++++.+
T Consensus 241 ~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l 320 (452)
T 2dgk_A 241 APDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL 320 (452)
T ss_dssp CTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH
T ss_pred CccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH
Confidence 65545566667999999999999999999999999876544344444567776543345577899997799999999999
Q ss_pred cHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 336 GFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 336 g~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
|.+|++++ ++.++++++++.|++.+.|
T Consensus 321 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 349 (452)
T 2dgk_A 321 GREGYTKVQNASYQVAAYLADEIAKLGPY 349 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 99999988 9999999999999998754
No 3
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-44 Score=354.46 Aligned_cols=329 Identities=17% Similarity=0.215 Sum_probs=268.2
Q ss_pred hhHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCC--ChHHHHHHHHHHhccCCCCCCCCcchH
Q 017569 21 RYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTW--MEPECDKLVMASINKNYVDMDEYPVTT 94 (369)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~--~~~~v~~~~~~~~~~n~~~~~~~~~~~ 94 (369)
.+++..++. .+|+.|.+.+++++++.+.+. .+.||+| .++++++ .+..+.+++..++|.|...|..+|+..
T Consensus 41 ~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~ 117 (481)
T 4e1o_A 41 GYLRAQLPE-SAPEDPDSWDSIFGDIERIIMPGVVHWQSPHM--HAYYPALTSWPSLLGDMLADAINCLGFTWASSPACT 117 (481)
T ss_dssp TTTGGGSCS-SCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTB--CSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHH
T ss_pred HHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHH
Confidence 345667776 689999999999999999865 2678886 4555443 345678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCC-----CCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeEEecCCC
Q 017569 95 ELQNRCVNMIAHLFNTPVAD-----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNIVTGANV 163 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~-----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~Vi~s~~~ 163 (369)
++|+++.+|+++++|.+.++ .....|++|+|||+||+++++++++++..+.+..|+.. .+.+|++++.+
T Consensus 118 ~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~ 197 (481)
T 4e1o_A 118 ELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQA 197 (481)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTS
T ss_pred HHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcc
Confidence 99999999999999998531 00125899999999999999999987654433333221 24589999999
Q ss_pred cchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCC
Q 017569 164 QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~ 237 (369)
|+++.+++++.|++++.||+++ +++||+++|+++|+++ |++|++++++|++|.++|+++|+++|+++
T Consensus 198 H~s~~~~~~~~g~~~~~v~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~------ 270 (481)
T 4e1o_A 198 HSSVEKAGLISLVKMKFLPVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE------ 270 (481)
T ss_dssp CHHHHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH------
T ss_pred hHHHHHHHHhCCCceEEEEcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHc------
Confidence 9999999999999999999986 4899999999999864 78899999999999999999999999999
Q ss_pred CceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-----
Q 017569 238 DTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ----- 311 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~----- 311 (369)
++|+|||+||+++.+ ..++.+.... +..+|++++|+|||+++|+|+|+++++++..+...+.....|+....
T Consensus 271 ~~~lhvDaA~g~~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~ 348 (481)
T 4e1o_A 271 GLWLHIDAAYAGTAF--LCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVAT 348 (481)
T ss_dssp TCEEEEECTTGGGGG--GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSC
T ss_pred CCeEEeehhhHHHHH--hChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCC
Confidence 999999999998765 3444333332 44679999999999999999999999987654444444556664321
Q ss_pred --CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 312 --PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 312 --~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
.+++++++|+.. ++++|++++.+|.+|++++ ++.++|+++++.|++.+.|
T Consensus 349 ~~~~~~~~~~r~~~-~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 402 (481)
T 4e1o_A 349 DFMHWQIPLSRRFR-SVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSF 402 (481)
T ss_dssp CGGGGSSSSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred CcccccccCCCCcc-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 235678898865 8999999999999999998 9999999999999998544
No 4
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=9.2e-44 Score=353.35 Aligned_cols=327 Identities=18% Similarity=0.197 Sum_probs=256.2
Q ss_pred hHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCC--hHHHHHHHHHHhccCCCCCCCCcchHH
Q 017569 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPVTTE 95 (369)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~--~~~v~~~~~~~~~~n~~~~~~~~~~~~ 95 (369)
+++..++. .+|+.|.+.+++++++.+.+. .+.||+| .++++++. +..+.+++..++|.|...|..+|...+
T Consensus 37 ~l~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~ 113 (475)
T 3k40_A 37 YLKPLIPD-AAPEKPEKWQDVMQDIERVIMPGVTHWHSPKF--HAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTE 113 (475)
T ss_dssp CSGGGSCS-SCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTB--CCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHH
T ss_pred HHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCCCCCcCc--eeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHH
Confidence 45666775 799999999999999999765 2678987 45554433 356789999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCC----CCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeEEecCCCcc
Q 017569 96 LQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNIVTGANVQV 165 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~Vi~s~~~h~ 165 (369)
+|+++.+|+++++|.+.++ .....+++|+|||+||+++++++|+++..+.+..|+.. .+++|+++..+|+
T Consensus 114 lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~ 193 (475)
T 3k40_A 114 LEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHS 193 (475)
T ss_dssp HHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCH
T ss_pred HHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchH
Confidence 9999999999999998521 01125899999999999999999887654332222211 1247999999999
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCc
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~ 239 (369)
++.+++++.|++++.||++++ + ||+++|+++|+++ |++|+++.++|++|.++|+++|+++|+++ ++
T Consensus 194 s~~~~~~~~g~~~~~v~~d~~-~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~------~~ 265 (475)
T 3k40_A 194 SVERAGLLGGVKLRSVQSENH-R-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKH------NL 265 (475)
T ss_dssp HHHHHHHHHTCEEEEECCBTT-B-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT------TC
T ss_pred HHHHHHHHcCCceEEEECCCC-C-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHh------CC
Confidence 999999999999999999875 8 9999999999875 67899999999999999999999999999 99
Q ss_pred eEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-------
Q 017569 240 PIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------- 311 (369)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~------- 311 (369)
|+|||+||+++.. ..++.+..+. +..+|++++|+|||+++|.|+|+++++++..+...+...+.|+....
T Consensus 266 ~lhvD~A~~~~~~--~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~ 343 (475)
T 3k40_A 266 WIHVDAAYAGSAF--ICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDY 343 (475)
T ss_dssp EEEEECTTGGGGG--GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC----------------------
T ss_pred eEEEeHHhHHHHH--hCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCc
Confidence 9999999998654 3443333333 44689999999999999999999999987665555545566664321
Q ss_pred CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 312 ~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
..++++++|++. ++++|++|+.+|.+|++++ ++.++|++++++|++.+.|
T Consensus 344 ~~~~~~~sr~~~-~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 395 (475)
T 3k40_A 344 RHWQIPLGRRFR-ALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRF 395 (475)
T ss_dssp -----CCCGGGT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred ccccccCCCccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 245678899865 8999999999999999998 9999999999999998544
No 5
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=4.8e-42 Score=343.92 Aligned_cols=324 Identities=17% Similarity=0.183 Sum_probs=265.7
Q ss_pred Hhhh---CCCCCCCCCCCCHHHHHHHHHHhhhh---cCCCCccccccccCCC--hHHHHHHHHHHhccCCCCCCCCcchH
Q 017569 23 VRAA---IPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPVTT 94 (369)
Q Consensus 23 ~~~~---~~~~~~p~~~~~~~~i~~~l~~~~~~---~~~p~~~l~~~~~~~~--~~~v~~~~~~~~~~n~~~~~~~~~~~ 94 (369)
++.. ++ .++|+.|.+.+++++++++++.. +.||+| .++++++. +..+.+++.++++.+...|..+|+..
T Consensus 58 l~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~f--~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~ 134 (511)
T 3vp6_A 58 LLEGMEGFN-LELSDHPESLEQILVDCRDTLKYGVRTGHPRF--FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFV 134 (511)
T ss_dssp HHHCBTTBC-CCCCSSCCCHHHHHHHHHHHHHTSCCTTSTTE--ESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHH
T ss_pred HHHHHhhCC-CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCc--eEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHH
Confidence 4455 44 47899999999999999887753 567876 45666544 24568999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHHhh
Q 017569 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFARY 173 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~Vi~s~~~h~s~~~~~~~ 173 (369)
++|+++++|+++++|++.+ ...+++|+|||+||+.++.++++.+..+....|.. ..+.+|++|..+|+++.++++.
T Consensus 135 ~le~~~~~~l~~~~g~~~~---~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~ 211 (511)
T 3vp6_A 135 LMEQITLKKMREIVGWSSK---DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA 211 (511)
T ss_dssp HHHHHHHHHHHHHHTCCSS---SCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCC---CCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHH
Confidence 9999999999999999852 24699999999999999999987542111122321 1245899999999999999999
Q ss_pred hcc---eeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 174 FEV---ELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 174 ~G~---~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
+|+ .++.||++++ ++||+++|+++|+++ |++|++++|+|++|.++|+++|+++|+++ ++|+|||
T Consensus 212 ~g~g~~~~~~v~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~------~~~lhvD 284 (511)
T 3vp6_A 212 LGFGTDNVILIKCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY------NLWLHVD 284 (511)
T ss_dssp TTSCGGGEEEECBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHH------TCEEEEE
T ss_pred cCCCCCcEEEeecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHc------CCEEEEE
Confidence 998 8999999874 999999999999875 88999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC---------CCc
Q 017569 245 AASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTF 314 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~---------~~~ 314 (369)
+||+++.+ ..++.+..+. +.++|++++++|||+++|.++|+++++++..+...+...+.|+.... ..+
T Consensus 285 ~a~~~~~~--~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 362 (511)
T 3vp6_A 285 AAWGGGLL--MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDK 362 (511)
T ss_dssp ETTGGGGG--GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGG
T ss_pred ccchhhHh--hChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCC
Confidence 99999876 4555555554 56789999999999999999999999987665444444566664321 235
Q ss_pred cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 315 TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 315 ~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+++++|++. ++++|++|+.+|.+|++++ ++.++++|++++|++.+-|
T Consensus 363 ~~~~~r~~~-al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 363 AIQCGRHVD-IFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp SSCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred CCCCCCchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 678898875 8999999999999999998 9999999999999987444
No 6
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=9.1e-41 Score=332.62 Aligned_cols=328 Identities=20% Similarity=0.245 Sum_probs=253.3
Q ss_pred hHhhhCCCCCCCCCCCCHHHHHHHHHHhhhh----cCCCCccccccccCCC--hHHHHHHHHHHhccCCCCCCCCcchHH
Q 017569 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPVTTE 95 (369)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~----~~~p~~~l~~~~~~~~--~~~v~~~~~~~~~~n~~~~~~~~~~~~ 95 (369)
.++..++. .+|+.|.+.+++++.+.+.+.. +.||+| .+|.++.. +..+.+++.+++|.+...|..++...+
T Consensus 37 ~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 113 (486)
T 1js3_A 37 YLRPLIPA-TAPQEPDTFEDILQDVEKIIMPGVTHWHSPYF--FAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTE 113 (486)
T ss_dssp CSGGGSCS-SCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTB--CSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHH
T ss_pred HHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--eEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHH
Confidence 35566765 6899999999999999986642 567876 34555433 345889999999988888888899999
Q ss_pred HHHHHHHHHHHHhCCCCCCC----CCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc-CCC-----CCCCeEEecCCCcc
Q 017569 96 LQNRCVNMIAHLFNTPVADD----KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ-GKP-----YDKPNIVTGANVQV 165 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~----~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~-g~~-----~~~~~Vi~s~~~h~ 165 (369)
+|+++++|+++++|++.++. ....+++|+|||+||+++++++++.+..+.+.. |.- ..+..|+++.++|+
T Consensus 114 le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~ 193 (486)
T 1js3_A 114 LETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHS 193 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCH
T ss_pred HHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcH
Confidence 99999999999999985210 013589999999999999999887543222111 100 00124889999999
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcC------cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCc
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT------ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~------~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~ 239 (369)
++.++++.+|++++.||+++ ++.||+++|+++|++++ ++|++++|+|++|.++|+++|+++|+++ ++
T Consensus 194 s~~~~~~~~G~~v~~v~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~------~~ 266 (486)
T 1js3_A 194 SVERAGLIGGVKLKAIPSDG-KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEE------DI 266 (486)
T ss_dssp HHHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT------TC
T ss_pred HHHHHHHhCCCceEEeecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHc------CC
Confidence 99999999999999999975 59999999999998765 4899999999999999999999999999 99
Q ss_pred eEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC-------
Q 017569 240 PIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------- 311 (369)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~------- 311 (369)
|+|||+||+++.+ ..++.+..+. +.++|++++|+|||+++|+++|+++++++..+...+...+.|+....
T Consensus 267 ~lhvD~a~g~~~~--~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~ 344 (486)
T 1js3_A 267 WLHVDAAYAGSAF--ICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLIT 344 (486)
T ss_dssp EEEEECTTGGGGG--GSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCC
T ss_pred EEEEehhhHHHHH--HCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCC
Confidence 9999999998765 3343333222 45799999999999999999999999876543334433445553311
Q ss_pred --CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 312 --PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 312 --~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
..++++++|+.. ++++|++++.+|.+|++++ ++.+++++++++|++.+-|
T Consensus 345 ~~~~~~~~~~rr~~-~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 398 (486)
T 1js3_A 345 DYRHWQLPLGRRFR-SLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRF 398 (486)
T ss_dssp CGGGSSSCSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred CccccCCCCCCchh-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 124566788775 8999999999999999998 8999999999999987544
No 7
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4.3e-40 Score=329.30 Aligned_cols=325 Identities=16% Similarity=0.169 Sum_probs=256.7
Q ss_pred hHhhh---CCCCCCCCCCCCHHHHHHHHHHhhhh---cCCCCccccccccCCChH--HHHHHHHHHhccCCCCCCCCcch
Q 017569 22 YVRAA---IPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVDMDEYPVT 93 (369)
Q Consensus 22 ~~~~~---~~~~~~p~~~~~~~~i~~~l~~~~~~---~~~p~~~l~~~~~~~~~~--~v~~~~~~~~~~n~~~~~~~~~~ 93 (369)
.++.. ++. .+|+.|.+.+++++.+++.+.. ..||+| .++.+++..+ .+.+++..++|.|...|..++..
T Consensus 54 ~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 130 (504)
T 2okj_A 54 QLLEGMEGFNL-ELSDHPESLEQILVDCRDTLKYGVRTGHPRF--FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVF 130 (504)
T ss_dssp HHHSCBTTBCC-CCCSSCCCHHHHHHHHHHHHHTSCCTTCTTE--ESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHH
T ss_pred HHHHHhhccCC-CCCCCCCCHHHHHHHHHHHhhccCCCCCCCE--EEEccCCCCHHHHHHHHHHHhhccCCCchhhChHH
Confidence 34555 553 7899999999999999887653 357876 3555554433 34688888889998888888999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHHh
Q 017569 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFAR 172 (369)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~Vi~s~~~h~s~~~~~~ 172 (369)
.++|+++++|+++++|++.+ ...+++|+|||+||+++++++++.+....+..|.. ..+.+|+++..+|+++.++++
T Consensus 131 ~~le~~~~~~la~~~g~~~~---~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 131 VLMEQITLKKMREIVGWSSK---DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHHHHHHTCCSS---SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCC---CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH
Confidence 99999999999999999831 14599999999999999999876421100112211 112379999999999999999
Q ss_pred hhcc---eeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEe
Q 017569 173 YFEV---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 173 ~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
.+|+ +++.||++++ +++|+++|+++|++ +|++|++++|+|++|.++|+++|+++|+++ ++|+||
T Consensus 208 ~~g~g~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~------g~~lhv 280 (504)
T 2okj_A 208 ALGFGTDNVILIKCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY------NLWLHV 280 (504)
T ss_dssp HTTSCGGGEEEECBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHH------TCEEEE
T ss_pred HcCCCcccEEEEecCCC-CCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc------CCEEEE
Confidence 9887 7899999764 99999999999987 589999999999999999999999999999 999999
Q ss_pred ecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC---------CC
Q 017569 244 DAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PT 313 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~---------~~ 313 (369)
|+||+++.. ..++.+..+. +.++|++++|+|||+++|+++|++++++++.+...+...+.|+.+.. .+
T Consensus 281 D~a~~~~~~--~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (504)
T 2okj_A 281 DAAWGGGLL--MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGD 358 (504)
T ss_dssp EETTGGGGG--GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGG
T ss_pred ehhhhhHHH--hCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCccc
Confidence 999998776 3444444444 45899999999999999999999999986554333333456663221 12
Q ss_pred ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 314 FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 314 ~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
++++++|++. ++++|++++.+|.+|++++ ++.++++++++.|++.+-|
T Consensus 359 ~~~~~~rr~~-~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 408 (504)
T 2okj_A 359 KAIQCGRHVD-IFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 408 (504)
T ss_dssp GSSCSSCBCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred CCCCCCCCcc-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 3457888875 8999999999999999988 8999999999999987444
No 8
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=320.81 Aligned_cols=323 Identities=14% Similarity=0.140 Sum_probs=250.0
Q ss_pred hHhhhCCCCCCCCCCCCHHHHHHHHHHhhhh---cCCCCccccccccCCCh-H-HHHHHHHHHhccCCCCCCCCcchHHH
Q 017569 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWME-P-ECDKLVMASINKNYVDMDEYPVTTEL 96 (369)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~---~~~p~~~l~~~~~~~~~-~-~v~~~~~~~~~~n~~~~~~~~~~~~l 96 (369)
.++..++ ..+|+.|.+.+++++.+++.... ..||+| ..+.+++.. . .+.+++..++|.+...|..+++..++
T Consensus 73 ~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~l 149 (515)
T 2jis_A 73 ELKQLLD-LELRSQGESQKQILERCRAVIRYSVKTGHPRF--FNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLM 149 (515)
T ss_dssp HHHHHHC-CCCCSSCCCHHHHHHHHHHHHHHSCCTTSTTE--ESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHH
T ss_pred HHHhhcc-cCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCe--EEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHH
Confidence 3455555 46899999999999999887654 347765 345555443 3 34577877788888888889999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHHhhhc
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFARYFE 175 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~Vi~s~~~h~s~~~~~~~~G 175 (369)
|+++++|+++++|++. ..+++|+|||+||++++.++++.+.......|.. ..+.+|++++.+|+++.++++.+|
T Consensus 150 e~~~~~~la~l~g~~~-----~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g 224 (515)
T 2jis_A 150 EEEVLRKLRALVGWSS-----GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLG 224 (515)
T ss_dssp HHHHHHHHHHHHTCSS-----CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCC-----CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcC
Confidence 9999999999999984 3599999999999999999876431100011210 112389999999999999999999
Q ss_pred c---eeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecc
Q 017569 176 V---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (369)
Q Consensus 176 ~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a 246 (369)
+ +++.||+++ ++.+|+++|+++|++ +|++|++++|+|++|.++|+++|+++|+++ ++|+|||+|
T Consensus 225 ~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~------g~~l~vD~a 297 (515)
T 2jis_A 225 LGTDSVRVVKADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH------GLWLHVDAA 297 (515)
T ss_dssp SCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH------TCEEEEEET
T ss_pred CCCCcEEEEecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc------CCeEEEehh
Confidence 8 899999986 489999999999986 489999999999999999999999999999 999999999
Q ss_pred cccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCC-CCcccccccccCccCCC---------CCCcc
Q 017569 247 SGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK-DDLPDELVFHINYLGSD---------QPTFT 315 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~-~~~~~~~~~~~~y~~~~---------~~~~~ 315 (369)
|+++.. ..+.....+. +.++|++++|+|||+++|.|+|+++++++ ..+...+...+.|+.+. ..+++
T Consensus 298 ~~~~~~--~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 375 (515)
T 2jis_A 298 WGGSVL--LSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV 375 (515)
T ss_dssp TGGGGG--GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGC
T ss_pred hhhHHH--hChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCC
Confidence 998876 3343333344 45889999999999999999999999986 44433333345565221 11245
Q ss_pred ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 316 LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 316 l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
++++|+.. ++++|++++.+|.+|++++ ++.+++++++++|++.+-|
T Consensus 376 ~~~~rr~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 423 (515)
T 2jis_A 376 VQCGRRVD-CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGF 423 (515)
T ss_dssp SCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred CCCCCccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 67788775 7999999999999999988 8999999999999987443
No 9
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.5e-38 Score=314.96 Aligned_cols=324 Identities=18% Similarity=0.261 Sum_probs=247.2
Q ss_pred hHhhhCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCChHHH-HHHHHHHhccCCCCCCCCcchHHH
Q 017569 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEPEC-DKLVMASINKNYVDMDEYPVTTEL 96 (369)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~~~~v-~~~~~~~~~~n~~~~~~~~~~~~l 96 (369)
.++..++...+|+.|.+.+++++++.+.+. .+.||+| |..+.+++.++.+ .+++..++|.+...|..++...++
T Consensus 63 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-l~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~l 141 (497)
T 2qma_A 63 ALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDC-IAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYV 141 (497)
T ss_dssp HHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTB-CSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHH
T ss_pred HHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe-eEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHH
Confidence 355667766689999999999999987654 2567876 4444444555554 555566777777778888899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH-----HhcCCCC--CCCeEEecCCCcchHHH
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR-----KEQGKPY--DKPNIVTGANVQVCWEK 169 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~-----~~~g~~~--~~~~Vi~s~~~h~s~~~ 169 (369)
|+++++|+++++|++. ...+++|+|||+||.++++++|+.+..++ ...|.+. .+.+|+++..+|+++.+
T Consensus 142 e~~~~~~la~~~g~~~----~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~ 217 (497)
T 2qma_A 142 EQKVVNWLCDKYDLSE----KADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQK 217 (497)
T ss_dssp HHHHHHHHHHHTTCCT----TCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHH
T ss_pred HHHHHHHHHHHhCCCC----CCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHH
Confidence 9999999999999974 13599999999999999999876543211 0122211 12379999999999999
Q ss_pred HHhhhcc---eeEEEeccCCccccCHHHHHHHHhhc------CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 170 FARYFEV---ELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 170 ~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
+++.+|. +++.||++++ +++|+++|+++|+++ +.+|+++.|+|++|.++|+++|+++|+++ ++|
T Consensus 218 ~~~~~g~g~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~------~~~ 290 (497)
T 2qma_A 218 SASWMGLGEKAVMTVDANAD-GTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKH------DMW 290 (497)
T ss_dssp HHHHTTSCGGGEEEECBCTT-SSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH------TCE
T ss_pred HHHHcCCCcccEEEEecCCC-CcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHc------CCE
Confidence 9999987 7899999864 999999999999864 44889999999999999999999999999 999
Q ss_pred EEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCC------CC
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------PT 313 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~------~~ 313 (369)
+|||+||+++..+ .+ ....+. +..+|++++|+|||+++|+++|+++++++..+ ..+.....|+.... ..
T Consensus 291 l~vD~a~~~~~~~--~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~-~~~~~~~~yl~~~~~~~~~~~~ 366 (497)
T 2qma_A 291 MHVDGAYGGALIL--SS-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYLNREHDELPNLVD 366 (497)
T ss_dssp EEEEETTGGGGGG--ST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGG-GGGCC-----------------
T ss_pred EEEehhhhHHHHh--Cc-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHH-HHhcCCchhcCCccccCCCccc
Confidence 9999999987763 22 222232 34789999999999999999999999887544 23333445653221 23
Q ss_pred ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 314 FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 314 ~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
++++++|+.. ++++|++++.+|.+|++++ ++.+++++|++.|++.+.|
T Consensus 367 ~~~~~~r~~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 416 (497)
T 2qma_A 367 KSIATTKRFD-ALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQF 416 (497)
T ss_dssp ---CCSCCCT-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred cCCCCCCchh-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 4557888875 8899999999999999988 8999999999999987544
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-36 Score=299.80 Aligned_cols=313 Identities=23% Similarity=0.361 Sum_probs=249.7
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhh-c----CCCCccccccccCCChHHHHHHHHHHhcc----CCCCCCCCcchHHHHHHH
Q 017569 30 FKMPDNSMPKEAAYQVINDELML-D----GNPRLNLASFVTTWMEPECDKLVMASINK----NYVDMDEYPVTTELQNRC 100 (369)
Q Consensus 30 ~~~p~~~~~~~~i~~~l~~~~~~-~----~~p~~~l~~~~~~~~~~~v~~~~~~~~~~----n~~~~~~~~~~~~le~~~ 100 (369)
..+|+.|.+.+++++.+++.... . .++++ .++.... ++.+.+++.++++. |..+|..+++..++|+++
T Consensus 36 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (497)
T 3mc6_A 36 PQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKV--SGAVYHG-GDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEV 112 (497)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCB--SSSCSCC-CHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCE--eeecCCC-chHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHH
Confidence 46899999999999999988764 2 23333 2222222 24555555555543 778888889999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEE
Q 017569 101 VNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180 (369)
Q Consensus 101 ~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~ 180 (369)
++|+++++|++.+ ...+++++||++|+.+++.++++....+ .| ..+++|+++.++|.++.++++.+|++++.
T Consensus 113 ~~~la~~~g~~~~---~~~~~~~~ggt~a~~~a~~a~~~~~~~~---~g--~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~ 184 (497)
T 3mc6_A 113 VSMVLRMFNAPSD---TGCGTTTSGGTESLLLACLSAKMYALHH---RG--ITEPEIIAPVTAHAGFDKAAYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHTTCCTT---TCCEEEESSHHHHHHHHHHHHHHHHHHH---SC--CSSCEEEEETTSCHHHHHHHHHSCCEEEE
T ss_pred HHHHHHHhCCCCC---CCeEEEcCcHHHHHHHHHHHHHHHHHhc---CC--CCCceEEEeCCccHHHHHHHHHcCCeEEE
Confidence 9999999999831 2459999999999999999988753321 22 22468999999999999999999999999
Q ss_pred EeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC---
Q 017569 181 VKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP--- 257 (369)
Q Consensus 181 v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~--- 257 (369)
||++++++.+|+++|+++++++|++|++++|+|++|.++|+++|+++|+++ |+|+|+|+||+++..+|...
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~------g~~livD~a~~~~~~~f~~~~~~ 258 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKY------KLPLHVDSCLGSFIVSFMEKAGY 258 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHT------TCCEEEETTTTHHHHGGGTTTTC
T ss_pred EecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHh------CCEEEEECcchhhhhhhhhhhcc
Confidence 999874589999999999999999999999999999999999999999999 99999999999877665431
Q ss_pred -Cc-cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh
Q 017569 258 -DL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (369)
Q Consensus 258 -~~-~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l 335 (369)
.. ++++...++|+++.++|||+++|.++|+++++++............|.++....+++.|+|++...+++|++++.+
T Consensus 259 ~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l 338 (497)
T 3mc6_A 259 KNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNM 338 (497)
T ss_dssp CSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHH
Confidence 11 3445567899999999999999999999998875332222223345555443455667899988889999999999
Q ss_pred cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 336 GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 336 g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+.+|++++ ++.+++++++++|++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (497)
T 3mc6_A 339 GENGYIESCQEIVGAAMKFKKYIQEN 364 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999887 8999999999999994
No 11
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.3e-33 Score=271.57 Aligned_cols=314 Identities=21% Similarity=0.296 Sum_probs=250.8
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhcC---CCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHH
Q 017569 31 KMPDNSMPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHL 107 (369)
Q Consensus 31 ~~p~~~~~~~~i~~~l~~~~~~~~---~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l 107 (369)
.+|+.+.+.+++++.+.+...... +|.+ .+..++++++.+.+++.+++..+..++..+++..+++++++++++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~ 81 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYRSLDLKYEDGNI--FGSMCSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSL 81 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHHTTSCCGGGTCB--CSCSCCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhhccCCCCCCCCe--EEEecCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHH
Confidence 589999999999999998765422 2333 34445555677889999988877666666678899999999999999
Q ss_pred hCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCc
Q 017569 108 FNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGY 187 (369)
Q Consensus 108 ~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~ 187 (369)
+|++. ..+++|+||++|+..++.+++.++..++........+++|+++.++|.++..+++..|++++.+|++++
T Consensus 82 ~~~~~-----~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 155 (397)
T 3f9t_A 82 LNNKD-----AYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKED- 155 (397)
T ss_dssp TTCTT-----CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTT-
T ss_pred hCCCC-----CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCC-
Confidence 99986 348999999999999999998765544322211223579999999999999999999999999999875
Q ss_pred cccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCC-------Cc
Q 017569 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-------DL 259 (369)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-------~~ 259 (369)
+.+|+++|++++++ ++++|+++.|+||+|.+.|+++|.++|+++ ++++|+|++|+++..++... ..
T Consensus 156 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 229 (397)
T 3f9t_A 156 YTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKEN------NIYIHVDAAFGGLVIPFLDDKYKKKGVNY 229 (397)
T ss_dssp SSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHH------TCEEEEECTTGGGTGGGCCGGGCCTTCCC
T ss_pred CcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHh------CCeEEEEccccchhhhhcccccccccccc
Confidence 89999999999999 899999999999999999999999999999 99999999999876654332 11
Q ss_pred cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh
Q 017569 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV 339 (369)
Q Consensus 260 ~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G 339 (369)
.+++.. ++|+++.++||++++|.++|+++++++... ..+.....|..... +..+.+++++...+++|+++..++.++
T Consensus 230 ~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~ 306 (397)
T 3f9t_A 230 KFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR-QATILGTRVGFGGACTYAVLRYLGREG 306 (397)
T ss_dssp CCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE-ECSSCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred cccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC-ccccccccccchHHHHHHHHHHHhHHH
Confidence 334445 899999999999999999999999876443 23322234443321 233457888777899999999999889
Q ss_pred HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 340 IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 340 ~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.++ +..++++++++.|++.|+
T Consensus 307 ~~~~~~~~~~~~~~l~~~L~~~g~ 330 (397)
T 3f9t_A 307 QRKIVNECMENTLYLYKKLKENNF 330 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8888 888999999999998854
No 12
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=1.6e-34 Score=289.47 Aligned_cols=318 Identities=21% Similarity=0.265 Sum_probs=251.2
Q ss_pred CCCCCCCCCHHHHHHHHHHhhh----hcCCCCccccccccCCC---hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHH
Q 017569 30 FKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM---EPECDKLVMASINKNYVDMDEYPVTTELQNRCVN 102 (369)
Q Consensus 30 ~~~p~~~~~~~~i~~~l~~~~~----~~~~p~~~l~~~~~~~~---~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~ 102 (369)
..+|+.|.+.+++++.+++... .+.++.+ .++..... .+.+.+++...++.|...+..+++..++|+++++
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~ 146 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYA--SGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVA 146 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCB--SSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCce--EEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHH
Confidence 3678999999999999988753 2445554 22222221 2456677777777888888888999999999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
|+++++|++.+. ....+++|+||++|+.+++.+++++...++ | ..+++|+++.++|.++.++++.+|++++.||
T Consensus 147 ~la~~~g~~~~~-~~v~~~~t~ggt~a~~~al~a~~~~g~~~~---g--~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~ 220 (514)
T 3mad_A 147 MTAHMLGGDAAG-GTVCGTVTSGGTESLLLAMKTYRDWARATK---G--ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTP 220 (514)
T ss_dssp HHHHHTTGGGGT-SCCEEEEESSHHHHHHHHHHHHHHHHHHHH---C--CSSCEEEEETTSCTHHHHHHHHHTCEEEEEC
T ss_pred HHHHHcCCCCcc-CCcceEEcCcHHHHHHHHHHHHHHHhhhhc---C--CCCCeEEEeCccchHHHHHHHHcCCeeEEee
Confidence 999999998311 123459999999999999999987533211 2 2347999999999999999999999999999
Q ss_pred ccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccC----CC
Q 017569 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY----PD 258 (369)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~----~~ 258 (369)
+++ ++.+|+++|+++|++++++|+++.++||+|.++|+++|+++|+++ ++|+|+|+||+++..++.. +.
T Consensus 221 ~~~-~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------~i~livDea~~~~~~~~~~~~g~~~ 293 (514)
T 3mad_A 221 LDA-DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEH------GIGCHVDACLGGFILPWAERLGYPV 293 (514)
T ss_dssp BCT-TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTTTTHHHHHHTTCCC
T ss_pred eCC-CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHh------CCeEEEecccccccchhHHhcCCCC
Confidence 987 489999999999999999999999999999999999999999999 9999999999987664322 11
Q ss_pred ccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh
Q 017569 259 LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (369)
Q Consensus 259 ~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~ 338 (369)
..+++...++|++++++|||+++|.++|+++++++............|.++....+++.|++++..++++|++++.++.+
T Consensus 294 ~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~ 373 (514)
T 3mad_A 294 PPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE 373 (514)
T ss_dssp CCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH
Confidence 23444566899999999999999999999999875433222222334444333344567899888889999999999999
Q ss_pred hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 339 VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 339 G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
|++++ +..+++++++++|++.+.+
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~~g~ 399 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAIPSL 399 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99888 8999999999999987433
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.98 E-value=3.5e-32 Score=268.74 Aligned_cols=297 Identities=15% Similarity=0.119 Sum_probs=217.3
Q ss_pred HhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHH-----hccCC-----C----CCC
Q 017569 23 VRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMAS-----INKNY-----V----DMD 88 (369)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~-----~~~n~-----~----~~~ 88 (369)
+++.++..++|+.|.+.+++.+.+++....+....++ ...+++.++.+.+.+... .+.+. . .+.
T Consensus 49 ~~~~~~~~~lp~~g~~~~~i~~~~~~~~~~~~~~yld--~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (456)
T 2z67_A 49 IEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPK--SVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKAS 126 (456)
T ss_dssp HHHHHHHCSCCSSCCCHHHHHHHHHHHHTTBGGGCTT--CEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBH
T ss_pred HHHhhccCCCCCCCCCHHHHHHHHHHHHhcccccccc--ccccccccccccccccCccccccCCCccHHHHHHhhCcccc
Confidence 4555666689999999999988887765544322222 222333344444444331 11111 0 112
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH
Q 017569 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (369)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~ 167 (369)
.++...++++++++++++++|++. . +++|+||| .+|..++.+++.. . .++.|+++.++|+++
T Consensus 127 ~~~~~~~~~~~~~~~la~~~g~~~-----~-~~~t~g~te~a~~~al~~~~~~-~----------~~~~vi~~~~~h~s~ 189 (456)
T 2z67_A 127 GASIMYALTNKILESFFKQLGLNV-----H-AIATPISTGMSISLCLSAARKK-Y----------GSNVVIYPYASHKSP 189 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-----E-EEEESSCHHHHHHHHHHHHHHH-H----------CCCEEEEECCCCHHH
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCC-----C-EEEeCcHHHHHHHHHHHHHHHh-c----------CCCEEEEECCCcHHH
Confidence 223578899999999999999985 2 89999999 5776677776542 0 135788899999999
Q ss_pred HHHHhhhcceeEEEecc--CCccccCHHHHHHHH-h----hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCce
Q 017569 168 EKFARYFEVELKEVKLE--EGYYVMNPVKAVELV-D----ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (369)
Q Consensus 168 ~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i-~----~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~ 240 (369)
.++++..|++++.+++. ++++.+|+++|+++| + .++++|+++.|+|++|.++|+++|+++|+++ ++|
T Consensus 190 ~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~------g~~ 263 (456)
T 2z67_A 190 IKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENY------DIP 263 (456)
T ss_dssp HHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHH------TCC
T ss_pred HHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHc------CCc
Confidence 99999999999998873 235899999999999 5 3677888999999999999999999999999 999
Q ss_pred EEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCc
Q 017569 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (369)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr 320 (369)
+|||+||+....++. +.....+.. ++|++++|+|||+++|.|+|++++|+++.+. .+ .+.|. |.+
T Consensus 264 v~vD~A~~~~~~g~~-~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~-~l--~~~~~----------g~~ 328 (456)
T 2z67_A 264 HIINGAYAIQNNYYL-EKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIK-EI--SLSYP----------GRA 328 (456)
T ss_dssp EEEECTTTTTCHHHH-HHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCHHHHH-HH--HTTSC----------SCB
T ss_pred EEEECcchHHHHHhh-HHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHh-hc--CcCCC----------CCC
Confidence 999999987654321 110111112 7999999999999999999999997654332 21 23333 233
Q ss_pred chhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 321 GSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 321 ~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++..++++|+++..+|.+|++++ +..+++++++++|++.
T Consensus 329 ~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 369 (456)
T 2z67_A 329 SATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDL 369 (456)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34458899999999999999888 9999999999999987
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.98 E-value=3.9e-32 Score=264.15 Aligned_cols=296 Identities=13% Similarity=0.045 Sum_probs=214.0
Q ss_pred HhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCC------------CCccccc--------cccCCChHHHHHHHHHHhcc
Q 017569 23 VRAAIPRFKMPDNSMPKEAAYQVINDELMLDGN------------PRLNLAS--------FVTTWMEPECDKLVMASINK 82 (369)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~------------p~~~l~~--------~~~~~~~~~v~~~~~~~~~~ 82 (369)
++..+..-.+|+.|.+.++|+..+.+...++.+ .++ +++ |+++. ....|++..
T Consensus 14 ~~~~~~~~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv-~~~~~~~r~~g~~hg~--~~~~d~l~~---- 86 (450)
T 3bc8_A 14 IRLLLEQGKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRV-ASALVARRHYRFIHGI--GRSGDISAV---- 86 (450)
T ss_dssp HHHHHHHCCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCC-SCHHHHHHTTTCCSCB--CC-----------
T ss_pred HHHHHHhccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceE-ecccccCCccceecch--hHHHHHHHh----
Confidence 345555568999999999999999987664321 121 122 22221 112233332
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC
Q 017569 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA 161 (369)
Q Consensus 83 n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~ 161 (369)
|. .+..+|+..++|+.+..|+.+++|++.. ..+++++|+| .++.+++.+++... ..++.|+++.
T Consensus 87 ~~-~~~~~~~~~~~e~~~~~~~~~~lGlp~~----~~~~lV~GaT~~~~a~~L~aar~~~----------~~~~~viv~r 151 (450)
T 3bc8_A 87 QP-KAAGSSLLNKITNSLVLNVIKLAGVHSV----ASCFVVPMATGMSLTLCFLTLRHKR----------PKAKYIIWPR 151 (450)
T ss_dssp CC-SBHHHHHHHHHHHHHHHHHHHHHTCTTC----CEEEEESSCHHHHHHHHHHHHHHHC----------TTCCEEEEEC
T ss_pred Cc-cccCCcHHHHHHHHHHHHHHHhCCCCCC----ceEEEECCHHHHHHHHHHHHcchhh----------cCCCEEEEEC
Confidence 44 4556678899999999999999999863 4569999998 77766766666531 1136899999
Q ss_pred CCcchHHHHHhhhcceeEEEecc--CCccccCHHHHHHHHhhc----CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhcc
Q 017569 162 NVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDEN----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (369)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~----~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~ 235 (369)
..|.|+.+++.++|++++.|+.. ++.+.||+++|+++|++. +.+|+.+.+++.+|.++|+++|+++|+++
T Consensus 152 ~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~---- 227 (450)
T 3bc8_A 152 IDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANY---- 227 (450)
T ss_dssp CCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHH----
T ss_pred CcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHC----
Confidence 99999999999999998888762 346899999999999763 34455544444467899999999999999
Q ss_pred CCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCcc
Q 017569 236 GWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFT 315 (369)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~ 315 (369)
|+|+|||+|||+... +..+.++..+...++|+++.|+|||+++|.+++++++|+++.+... ...|.+
T Consensus 228 --gi~l~VD~A~G~~~~-~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~---~~~~~g------- 294 (450)
T 3bc8_A 228 --DIPHVVNNAYGLQSS-KCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI---SKMYPG------- 294 (450)
T ss_dssp --TCCEEEECTTTTTCH-HHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH---HHHSCS-------
T ss_pred --CCeEEEECCCchhhh-hhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHH---HHHhhc-------
Confidence 999999999997654 1111111111125899999999999999999999999876544221 123332
Q ss_pred ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 316 LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 316 l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+..+++.+|.++..+|.+|++++ ++++++++++++|++.+
T Consensus 295 ---~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 295 ---RASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp ---CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 2223357999999999999999988 89999999999998765
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=3.3e-26 Score=226.95 Aligned_cols=302 Identities=10% Similarity=0.012 Sum_probs=216.4
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhhcCC---CCccccccccCCChHHHHHHHHHHhc-cCCCCCC-CCcchHHHHHHHHHHH
Q 017569 30 FKMPDNSMPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVMASIN-KNYVDMD-EYPVTTELQNRCVNMI 104 (369)
Q Consensus 30 ~~~p~~~~~~~~i~~~l~~~~~~~~~---p~~~l~~~~~~~~~~~v~~~~~~~~~-~n~~~~~-~~~~~~~le~~~~~~l 104 (369)
..+| +.+..++++.+.++...+.. ..++|+ .++....|.+.+.+.+.+. .++..+. .+++..++++++++++
T Consensus 40 ~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l 116 (474)
T 1wyu_B 40 PRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYL 116 (474)
T ss_dssp CCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHH
T ss_pred CCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHH
Confidence 4577 79999999999887654322 223455 4444433445544444332 2333332 3678899999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
++++|++. ..++++||++|+..++.+++.... ..|....+++|+++.++|.++..+++..|++++.||++
T Consensus 117 a~~~g~~~------~~~~~~ggt~a~~~al~~~~~~~~----~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~ 186 (474)
T 1wyu_B 117 KALTGMDA------ITLEPAAGAHGELTGILIIRAYHE----DRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG 186 (474)
T ss_dssp HHHHTCSE------EECCCSSHHHHHHHHHHHHHHHHH----HTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC
T ss_pred HHHHCCCc------eeecChHHHHHHHHHHHHHHHHHH----hcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC
Confidence 99999974 256889999999998888765321 12310124589999999999999999999999999998
Q ss_pred CCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc
Q 017569 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (369)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (369)
++ +.+|+++|++++++++++|++++| |++|.+ +|+++|+++|+++ ++++|+|++|+.+..+... .
T Consensus 187 ~~-~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~------g~~li~Dea~~~~~~g~~~------~ 252 (474)
T 1wyu_B 187 PE-GEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEA------GVQLYYDGANLNAIMGWAR------P 252 (474)
T ss_dssp TT-SSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHH------TCEEEEEGGGGGGTTTTCC------H
T ss_pred CC-CCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHc------CCEEEEeCchhhhhccCCC------c
Confidence 64 899999999999999999999998 579998 7999999999999 9999999999765532111 1
Q ss_pred cCCCCcEEEEcCccCCCCCC-----CeEEEEEeCCCCcccccccc-c-----CccCC--CC---CCccccCCcchhHHHH
Q 017569 264 RLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVFH-I-----NYLGS--DQ---PTFTLNFSKGSSQIIA 327 (369)
Q Consensus 264 ~~~~~Dsi~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~-~-----~y~~~--~~---~~~~l~~tr~~~~~l~ 327 (369)
...++|+++.|+||++++|. ++|+++++++ .. +.+... . .|... .. ... ..++.+....++
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~-~~l~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~a 329 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LA-PYLPVPLVERGEEGFYLDFDRPKSIGRV-RSFYGNFLALVR 329 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GG-GGCCSCEEEECSSCEEEECCCTTCCCCS-SSTTSCHHHHHH
T ss_pred ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HH-HhCCCCeeeccCCeeEecccCcccCccc-ccCcCcHHHHHH
Confidence 11268999999999998885 6899999763 22 222100 0 01000 00 000 012233445677
Q ss_pred HHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 328 QYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 328 ~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+|.+++.+|.++++++ +..+++++++++|++.|+
T Consensus 330 a~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~ 365 (474)
T 1wyu_B 330 AWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGY 365 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 8888888899999887 899999999999998753
No 16
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=228.32 Aligned_cols=302 Identities=14% Similarity=0.016 Sum_probs=209.9
Q ss_pred HhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCc-cccccccCCChHHHHHHHHH-Hhc--cCC---CCC-CCCc---
Q 017569 23 VRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRL-NLASFVTTWMEPECDKLVMA-SIN--KNY---VDM-DEYP--- 91 (369)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~p~~-~l~~~~~~~~~~~v~~~~~~-~~~--~n~---~~~-~~~~--- 91 (369)
++..|.+-++|+.|.+...|...+.++-.++.+... |.+.+.--. .....++.+ .++ .+- ++- +..|
T Consensus 32 ~~~ll~~r~~P~~g~~d~~ie~~l~~la~mdsnn~~~~~g~GERE~--Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAa 109 (501)
T 3hl2_A 32 IRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREG--RVASALVARRHYRFIHGIGRSGDISAVQPKAA 109 (501)
T ss_dssp HHHHHHHCCCCSSCCCHHHHHHHHHHHHTTBGGGCSSCCCCSSCCC--CCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBH
T ss_pred HHHHHHcCCCCccCCCHHHHHHHHHHHHhhccCCCcccCCcccchH--HHHHHHHHhhccCcccCCCCccccccCCCCcc
Confidence 456677778999999999999999988776543221 111111100 112233332 121 111 110 1111
Q ss_pred c---hHHH-HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH
Q 017569 92 V---TTEL-QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (369)
Q Consensus 92 ~---~~~l-e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~ 167 (369)
| ..+| +..+.+|++.+ |++.. ....+++|+|.+++..+.++.++.+ + .+++||+|...|.|+
T Consensus 110 Gssll~~ltn~l~ld~L~~~-G~~~~----~~~flVnGsTgg~lamilaa~r~~r--------p-g~d~VIvpRn~HKSv 175 (501)
T 3hl2_A 110 GSSLLNKITNSLVLDIIKLA-GVHTV----ANCFVVPMATGMSLTLCFLTLRHKR--------P-KAKYIIWPRIDQKSC 175 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCTTC----CEEEEESSCHHHHHHHHHHHHHHHC--------T-TCCEEEEECCCCHHH
T ss_pred chHHHHHHHHHHHHHHHHHc-CCCCC----CcEEEECcHHHHHHHHHHHHcCccc--------C-CCCEEEEecchHHHH
Confidence 2 2333 34566788877 99852 4578889999777676666655310 0 136899999999999
Q ss_pred HHHHhhhcceeEEEec--cCCccccCHHHHHHHHhhc---CcEEEEeeCCCC-cccCCCHHHHHHHHHHhhhccCCCceE
Q 017569 168 EKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDEN---TICVAAILGSTL-TGEFEDVKLLHDLLTKKNEETGWDTPI 241 (369)
Q Consensus 168 ~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~-tG~~~~l~~I~~l~~~~~~~~~~~~~l 241 (369)
.+++.+.|+.+++|+. +++...+|+++|+++|++. .++++++.+++. .+.++|+++|+++|+++ ++|+
T Consensus 176 ~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~------gIpl 249 (501)
T 3hl2_A 176 FKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANY------DIPH 249 (501)
T ss_dssp HHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHH------TCCE
T ss_pred HHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHc------CCeE
Confidence 9999999999999976 3346899999999999874 344444444444 35779999999999999 9999
Q ss_pred EeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcc
Q 017569 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (369)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~ 321 (369)
|||+|||+...++ .+.+...+...++|.++.|+||++++|.|+++++.++++.+... ...|. |+++
T Consensus 250 lVDeAhGah~~~~-~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yP----------Gr~S 315 (501)
T 3hl2_A 250 IVNNAYGVQSSKC-MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYP----------GRAS 315 (501)
T ss_dssp EEECTTCTTCHHH-HHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSC----------SCBC
T ss_pred EEeCcchhhhhhh-hhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhCC----------CCCC
Confidence 9999999866421 11111222233499999999999999999888888876544321 22332 5667
Q ss_pred hhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 322 SSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 322 ~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+.+++.+|++++.+|.+||+++ ++.++++||+++|++..
T Consensus 316 ~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la 356 (501)
T 3hl2_A 316 ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLS 356 (501)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999 99999999999999853
No 17
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=6.4e-26 Score=219.52 Aligned_cols=269 Identities=12% Similarity=0.020 Sum_probs=199.7
Q ss_pred CCCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 55 NPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 55 ~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
+|...+..-.|..+++.+.+++.+.+ .. ..++...++.+++++++++++|.+.+ ...++++||++|+..++
T Consensus 11 ~~~~~~~~pgp~~~~~~v~~a~~~~~----~~-~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~sgt~al~~~~ 81 (411)
T 3nnk_A 11 PPSRLLMGPGPINADPRVLRAMSSQL----IG-QYDPAMTHYMNEVMALYRGVFRTENR----WTMLVDGTSRAGIEAIL 81 (411)
T ss_dssp CCCCEEESSSCCCCCHHHHHHHTSCC----CC-TTCHHHHHHHHHHHHHHHHHHTCCCS----EEEEEESCHHHHHHHHH
T ss_pred CccceeecCCCCCCCHHHHHHhhccc----cc-cccHHHHHHHHHHHHHHHHHhCCCCC----cEEEECCCcHHHHHHHH
Confidence 34332333334445566666655432 11 12455667788999999999999852 23678889999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILG 211 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~ 211 (369)
.++..+ +++|+++.++|++ +...++..|++++.+|++.+ +.+|+++|++++++ ++++|+++++
T Consensus 82 ~~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~ 147 (411)
T 3nnk_A 82 VSAIRP-------------GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWG-EVFTPDQVEDAVKRIRPRLLLTVQG 147 (411)
T ss_dssp HHHCCT-------------TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred HHhcCC-------------CCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHhhCCCeEEEEeCC
Confidence 887432 4799999999988 88888999999999999764 89999999999987 8999999999
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
+||+|.+.|+++|+++|+++ ++++|+|++++.+..+ .++...++|.++.++|||+++|.|+|+++++
T Consensus 148 ~nptG~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~ 214 (411)
T 3nnk_A 148 DTSTTMLQPLAELGEICRRY------DALFYTDATASLGGNP-------LETDVWGLDAVSAGMQKCLGGPSGTSPITLS 214 (411)
T ss_dssp ETTTTEECCCTTHHHHHHHH------TCEEEEECTTTBTTBC-------CCTTTTTCSEEECCSTTTTCCCSSEEEEEEC
T ss_pred CCCcceeccHHHHHHHHHHc------CCEEEEECCcccCCcc-------cchhccCCcEEEecCccccCCCCceEEEEEC
Confidence 99999999999999999999 9999999998765432 2333347899999999999899999999986
Q ss_pred CCCCccccccc----ccCccCCCC-----------------------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH-
Q 017569 292 TKDDLPDELVF----HINYLGSDQ-----------------------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF- 343 (369)
Q Consensus 292 ~~~~~~~~~~~----~~~y~~~~~-----------------------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~- 343 (369)
++ .. +.+.. .+.|.++.. ......++.+....+++..++..+..+|++++
T Consensus 215 ~~-~~-~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (411)
T 3nnk_A 215 AR-ME-EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGI 292 (411)
T ss_dssp HH-HH-HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HH-HH-HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 43 11 11111 111221110 00012256666667778888888888888887
Q ss_pred -HhhHHHHHHHHHHHhcCC
Q 017569 344 -CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 344 -~~~~~a~~l~~~L~~~g~ 361 (369)
+..++++++++.|++.|+
T Consensus 293 ~~~~~~~~~l~~~L~~~g~ 311 (411)
T 3nnk_A 293 ARHKLHGDALVKGIQAMGL 311 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 899999999999998754
No 18
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.94 E-value=4.2e-25 Score=211.00 Aligned_cols=261 Identities=15% Similarity=0.045 Sum_probs=192.5
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCC----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
++++++.+.+++.+++.....++.. .....++.+++++++++++|+++ ..+++|+||++|+.+++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~~ 83 (382)
T 4hvk_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-----GTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTT-----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCc-----CeEEEECCchHHHHHHHHHhhhh
Confidence 3355677888888877653332221 23456778889999999999975 34899999999999999987632
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh---hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
+. . .+++|+++.++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|++++++||||.
T Consensus 84 ~~----~-----~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 153 (382)
T 4hvk_A 84 NA----R-----KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY-GEVDVSFIDQKLRDDTILVSVQHANNEIGT 153 (382)
T ss_dssp HG----G-----GCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTT-SCBCHHHHHHHCCTTEEEEECCSBCTTTCB
T ss_pred hc----C-----CCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCC-CCcCHHHHHHHhccCceEEEEECCCCCcee
Confidence 10 0 147999999999998877665 4999999999864 899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.|+++|.++|+++ ++ +|+|++++.+..+ .++...++|.++.++||++ +|.|+|+++++++..+.
T Consensus 154 ~~~~~~i~~l~~~~------~~-li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~~~~~ 218 (382)
T 4hvk_A 154 IQPVEEISEVLAGK------AA-LHIDATASVGQIE-------VDVEKIGADMLTISSNDIY-GPKGVGALWIRKEAKLQ 218 (382)
T ss_dssp BCCHHHHHHHHSSS------SE-EEEECTTTBTTBC-------CCHHHHTCSEEEEESGGGT-SCTTCEEEEEETTCCCC
T ss_pred eCCHHHHHHHHHHc------CE-EEEEhHHhcCCCC-------CCchhcCCCEEEEeHHHhc-CCCceEEEEEcCccCcC
Confidence 99999999999999 99 9999998764431 2222236899999999974 78889999998754221
Q ss_pred cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
. .+.+.........++.+.....++..++..+ .++++++ +..++++++++.|++.+.+
T Consensus 219 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 278 (382)
T 4hvk_A 219 P------VILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEES 278 (382)
T ss_dssp C------SSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred c------ccccCCCcCccccCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1 1111111111112444555555565666643 4577776 8999999999999987433
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=2.6e-25 Score=215.59 Aligned_cols=238 Identities=14% Similarity=0.062 Sum_probs=183.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WE 168 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~ 168 (369)
+...++.+++++++++++|.+.+ ...++++||++|+..++.++..+ +++|+++.++|++ +.
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~----~~~~~~~s~t~al~~~~~~l~~~-------------gd~Vl~~~~~~~~~~~~ 102 (416)
T 3isl_A 40 PAFTGIMNETMEMLRELFQTKNR----WAYPIDGTSRAGIEAVLASVIEP-------------EDDVLIPIYGRFGYLLT 102 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCS----EEEEEESCHHHHHHHHHHHHCCT-------------TCEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC----cEEEecCcHHHHHHHHHHHhcCC-------------CCEEEEecCCcccHHHH
Confidence 45577888999999999998752 12347889999999988877331 4799999999998 77
Q ss_pred HHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccc
Q 017569 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (369)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~ 247 (369)
..++..|++++.+|++.+ +.+|+++|+++++ +++++|++++++||||.+.|+++|.++|+++ ++++|+|+++
T Consensus 103 ~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~a~ 175 (416)
T 3isl_A 103 EIAERYGANVHMLECEWG-TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTE------DALFIVDAVA 175 (416)
T ss_dssp HHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHT------TCEEEEECTT
T ss_pred HHHHhcCCeeEEEecCCC-CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHc------CCEEEEECCc
Confidence 888899999999999875 7999999999998 5899999999999999999999999999999 9999999998
Q ss_pred ccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc----cCcc---------CCC----
Q 017569 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH----INYL---------GSD---- 310 (369)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~----~~y~---------~~~---- 310 (369)
+.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. ..+... ..|. ++.
T Consensus 176 ~~~~~~-------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~-~~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~ 246 (416)
T 3isl_A 176 TIGGCE-------VKVDEWKIDAAIGGTQKCLSVPSGMAPITYNER-VA-DVIAARKKVERGIATQADRAALSGNRPITS 246 (416)
T ss_dssp TTTTSC-------CCTTTTTCSEEECCSSSTTCCCSSEEEEEECHH-HH-HHHHTC------------------CCCCSC
T ss_pred cccCCC-------cchhhcCCCEEEecCccccCCCCCeEEEEECHH-HH-HHhhccccccccccccccchhccCCCCCCc
Confidence 754431 233334789999999999999999999998653 11 111100 0000 000
Q ss_pred ------------CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 311 ------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 311 ------------~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.......++.+....+++.+++..+...|++++ +..++++++.+.|++.|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~ 311 (416)
T 3isl_A 247 NYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGL 311 (416)
T ss_dssp STTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 001112356666667788888888888888888 899999999999998754
No 20
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=3.7e-25 Score=212.22 Aligned_cols=258 Identities=11% Similarity=-0.016 Sum_probs=192.4
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
+.+.++.+.+++.+.+.. .+ ++...++++++++++++++|.+. ...+++|+||++|+..++.++.++
T Consensus 28 ~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~----~~~v~~~~g~t~a~~~~~~~l~~~---- 94 (386)
T 2dr1_A 28 PVACFPEVLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEK----GEVLLVPSSGTGIMEASIRNGVSK---- 94 (386)
T ss_dssp SCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSS----SEEEEESSCHHHHHHHHHHHHSCT----
T ss_pred CcCCcHHHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCC----CcEEEEeCChHHHHHHHHHHhhcC----
Confidence 444557777766655432 22 33457888999999999999971 124789999999999998887432
Q ss_pred HHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHh--hcCcEEEEeeCCCCcccCCC
Q 017569 145 RKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTLTGEFED 220 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~tG~~~~ 220 (369)
+++|+++.++|++ +...++..|++++.+|++.+ +.+|+++|+++++ +++++|++++++||||.+.|
T Consensus 95 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 164 (386)
T 2dr1_A 95 ---------GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPG-KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP 164 (386)
T ss_dssp ---------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred ---------CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCC-CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC
Confidence 4689999999998 88888999999999999864 8899999999994 57899999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 300 (369)
+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++++|.|+|+++++++ .. ..+
T Consensus 165 l~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~-~~-~~~ 229 (386)
T 2dr1_A 165 LPELAKVAKEH------DKLVFVDAVSAMGGAD-------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER-FL-EIA 229 (386)
T ss_dssp HHHHHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHH-HH-HHH
T ss_pred HHHHHHHHHHc------CCeEEEEccccccCcc-------ccccccCCcEEEEeccccccCCCceEEEEECHH-HH-HHH
Confidence 99999999999 9999999999875542 222333689999999999998888999998642 21 111
Q ss_pred cc--ccCccCC------CCC-CccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 301 VF--HINYLGS------DQP-TFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 301 ~~--~~~y~~~------~~~-~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ...|... ... .....++.+.....++..+|+.+..+ |++++ +..++++++.+.|++.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g 301 (386)
T 2dr1_A 230 EKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG 301 (386)
T ss_dssp TTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 10 0000000 000 00112455555566777788887666 67777 89999999999999875
No 21
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=6.3e-25 Score=210.29 Aligned_cols=258 Identities=15% Similarity=0.052 Sum_probs=188.5
Q ss_pred CCChHHHHHHHHHHhccCCCCC----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDM----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
+++++.+.+++.+.+.....++ ..++.......++++++++++|.++ ..+++|+||++|+.+++.++...+
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~l~~~~ 84 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-----GTVVFTSGATEANNLAIIGYAMRN 84 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTT-----EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEcCchHHHHHHHHHHHHhhc
Confidence 4556888888888776422221 1122445777889999999999874 248999999999999999886321
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHhh---hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (369)
. .+ +++|++++++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|++++++||||.+
T Consensus 85 ~----~~-----gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 154 (382)
T 4eb5_A 85 A----RK-----GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY-GEVDVSFIDQKLRDDTILVSVQHANNEIGTI 154 (382)
T ss_dssp G----GG-----CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTT-SCBCHHHHHHHCCTTEEEEECCSBCTTTCBB
T ss_pred c----CC-----CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCC-CccCHHHHHHHhcCCCeEEEEeccCCCcccc
Confidence 0 01 46899999999998777654 6999999999864 8999999999999889999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccc
Q 017569 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~ 298 (369)
.|+++|.++|+++ +++ |+|++|+.+..+ .++...++|.++.++||+ ++|.|+|+++++++..+..
T Consensus 155 ~~l~~i~~l~~~~------~~~-i~D~a~~~g~~~-------~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~ 219 (382)
T 4eb5_A 155 QPVEEISEVLAGK------AAL-HIDATASVGQIE-------VDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQP 219 (382)
T ss_dssp CCHHHHHHHHTTS------SEE-EEECTTTBTTBC-------CCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCCCC
T ss_pred CCHHHHHHHHHHC------CCE-EEEcchhcCCcc-------cCccccCCCEEEeehHHh-cCCCceEEEEEccccccCc
Confidence 9999999999999 999 999999854321 122212579999999998 5788899999987531211
Q ss_pred ccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 299 ~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
. +.+.........++.+.....++..++..+. ++++++ +..++++++.+.|++.+
T Consensus 220 ~------~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~ 276 (382)
T 4eb5_A 220 V------ILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIE 276 (382)
T ss_dssp S------SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred e------ecCCCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCC
Confidence 1 1111000011124554444556666776653 467666 88999999999998863
No 22
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=7e-25 Score=211.01 Aligned_cols=258 Identities=11% Similarity=-0.028 Sum_probs=190.1
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
.+.+.++.+.+++.+.+.. . .++.......++++++++++|.++ ..+++|+||++|+.+++.++..+
T Consensus 16 ~~~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~t~g~t~a~~~~~~~~~~~--- 82 (392)
T 2z9v_A 16 GPVNAYPEVLRGLGRTVLY---D--YDPAFQLLYEKVVDKAQKAMRLSN-----KPVILHGEPVLGLEAAAASLISP--- 82 (392)
T ss_dssp SCCCCCHHHHHHTTSCCCC---T--TSHHHHHHHHHHHHHHHHHTTCSS-----CCEEESSCTHHHHHHHHHHHCCT---
T ss_pred CCcCCCHHHHHHHhccccc---c--ccHHHHHHHHHHHHHHHHHhCCCC-----CEEEEeCCchHHHHHHHHHhcCC---
Confidence 3445567788877766643 1 234455666788889999999874 24899999999999998887331
Q ss_pred HHHhcCCCCCCCeEEecCCCcchH--HHHHhhhcceeEEEeccCCccccCHHHHHHHHh--hcCcEEEEeeCCCCcccCC
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~tG~~~ 219 (369)
+++|+++.++|+++ ...++..|++++.+|++++ +.+|+++|+++++ +++++|++++++||||.+.
T Consensus 83 ----------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 151 (392)
T 2z9v_A 83 ----------DDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN-EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTIN 151 (392)
T ss_dssp ----------TCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEEC
T ss_pred ----------CCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC-CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceec
Confidence 46899999999875 3444567999999999875 7899999999995 4789999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. +.
T Consensus 152 ~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~-~~-~~ 216 (392)
T 2z9v_A 152 PIDAIGALVSAH------GAYLIVDAVSSFGGMK-------THPEDCKADIYVTGPNKCLGAPPGLTMMGVSER-AW-AK 216 (392)
T ss_dssp CHHHHHHHHHHT------TCEEEEECTTTBTTBS-------CCGGGGTCSEEEECSSSTTCCCSCCEEEEECHH-HH-HH
T ss_pred cHHHHHHHHHHc------CCeEEEEcccccCCcc-------cccccccceEEEecCcccccCCCceeEEEECHH-HH-HH
Confidence 999999999999 9999999999854331 122222589999999999999999999998642 21 11
Q ss_pred ccc-c--c--CccC------CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 300 LVF-H--I--NYLG------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 300 ~~~-~--~--~y~~------~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+.. . . .+.+ .........++.+....+++..+++.+...|++++ +..++++++++.|++.|
T Consensus 217 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g 290 (392)
T 2z9v_A 217 MKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG 290 (392)
T ss_dssp HHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 110 0 0 1110 00001112355555556677788888877778776 88999999999998864
No 23
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=1e-24 Score=210.12 Aligned_cols=259 Identities=10% Similarity=-0.034 Sum_probs=195.4
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
.+.+.++.+.+++.+.+.. .+ ++...++.+++++++++++|.+++ ..+++|+||++|+..++.++..+
T Consensus 41 ~~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~----~~v~~t~g~t~al~~~~~~~~~~--- 108 (393)
T 1vjo_A 41 GPSNAHPSVLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENP----LTIAVSGTGTAAMEATIANAVEP--- 108 (393)
T ss_dssp SCCCCCHHHHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCS----CEEEESSCHHHHHHHHHHHHCCT---
T ss_pred CCCCCCHHHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCchHHHHHHHHHhccCC---
Confidence 3445567777777666542 22 234668888999999999999742 14899999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCC
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~ 220 (369)
+++|+++.++|.+ +...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|
T Consensus 109 ----------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 177 (393)
T 1vjo_A 109 ----------GDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG-EVFSLEELRTALETHRPAILALVHAETSTGARQP 177 (393)
T ss_dssp ----------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred ----------CCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHhhCCceEEEEeccCCCcceecc
Confidence 4689999999998 88999999999999999874 88999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 300 (369)
+++|.++|+++ ++++|+|++|+.+.. +.++...++|.++.++||++++|.++|+++++++ .. +.+
T Consensus 178 l~~i~~l~~~~------~~~li~Dea~~~g~~-------~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~-~~~ 242 (393)
T 1vjo_A 178 LEGVGELCREF------GTLLLVDTVTSLGGV-------PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSR-AI-EKL 242 (393)
T ss_dssp CTTHHHHHHHH------TCEEEEECTTTTTTS-------CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHH-HH-HHH
T ss_pred HHHHHHHHHHc------CCEEEEECCccccCc-------CCcccccCccEEEEcCcccccCCCceEEEEECHH-HH-HHH
Confidence 99999999999 999999999984322 1233334789999999999999999999998653 21 111
Q ss_pred ccc----cCccCCC------CCCcccc-CCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 301 VFH----INYLGSD------QPTFTLN-FSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 301 ~~~----~~y~~~~------~~~~~l~-~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
... ..+..+. ....... ++.+.....++..+++.+..++++++ +..++++++.+.|++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 315 (393)
T 1vjo_A 243 QRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG 315 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 100 0110000 0000111 25555556677788887766677777 89999999999999875
No 24
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=2.7e-24 Score=209.12 Aligned_cols=264 Identities=17% Similarity=0.092 Sum_probs=194.1
Q ss_pred cccCCChHHHHHHHHHHhc--cCCCCCCC-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 63 FVTTWMEPECDKLVMASIN--KNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 63 ~~~~~~~~~v~~~~~~~~~--~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
..++++++.+.+++.+.+. ....++.. .....+..+++++++++++|.++ ..+++|+||++|+.+++.
T Consensus 29 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~ggt~a~~~a~~ 103 (423)
T 3lvm_A 29 SATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP-----REIVFTSGATESDNLAIK 103 (423)
T ss_dssp TTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESSHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCC-----CeEEEeCChHHHHHHHHH
Confidence 3344567888888888776 33332221 12445677889999999999975 348999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh---cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
++.+.+. ..+++|+++.++|+++..++..+ |++++.+|++++ +.+|+++|++++++++++|+++.++
T Consensus 104 ~l~~~~~---------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~ 173 (423)
T 3lvm_A 104 GAANFYQ---------KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRN-GIIDLKELEAAMRDDTILVSIMHVN 173 (423)
T ss_dssp HHHHHHT---------TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTT-SCCCHHHHHHHCCTTEEEEECCSBC
T ss_pred HHHHhhc---------cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCC-CccCHHHHHHhcCCCcEEEEEeCCC
Confidence 8875321 11479999999999988887555 999999999874 8999999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
||+|.+.|+++|.++|+++ ++++|+|++++.+..+ .+....++|.++.++||+ ++|.|+|++++++
T Consensus 174 nptG~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~ 239 (423)
T 3lvm_A 174 NEIGVVQDIAAIGEMCRAR------GIIYHVDATQSVGKLP-------IDLSQLKVDLMSFSGHKI-YGPKGIGALYVRR 239 (423)
T ss_dssp TTTCBBCCHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCTTTSCCSEEEEESTTT-TSCSSCEEEEECB
T ss_pred CCCccccCHHHHHHHHHHc------CCEEEEEhhhhcCCCC-------cChhhcCCCEEEechHHh-cCCCCeEEEEEec
Confidence 9999999999999999999 9999999999875432 223333689999999996 5788899999875
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+... .+ ...+.++........++.+....+++.+++..+... ++++ +..++++++++.|++++
T Consensus 240 ~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~ 304 (423)
T 3lvm_A 240 KPRV--RI--EAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEE-MATEMERLRGLRNRLWNGIKDIE 304 (423)
T ss_dssp TTBC--CC--CCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTST
T ss_pred cccC--CC--CccccCCcccccccCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCC
Confidence 4221 11 111111111111112455555556666677666443 5555 89999999999998874
No 25
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.93 E-value=8.9e-26 Score=213.56 Aligned_cols=257 Identities=12% Similarity=0.035 Sum_probs=189.7
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
|.++++.+.+++.+.+..+ .++...+...++++++++++|.+.+ ...+++|+||++|+.+++.++..
T Consensus 8 p~~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~l~~~la~~~g~~~~---~~~v~~t~g~t~a~~~~~~~~~~----- 74 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRGH-----LDPEVLRVNRAIQERLAALFDPGEG---ALVAALAGSGSLGMEAGLANLDR----- 74 (353)
T ss_dssp SCCCCHHHHGGGGSCCCCT-----TCHHHHHHHHHHHHHHHHHHCCCTT---CEEEEESSCHHHHHHHHHHTCSC-----
T ss_pred CCCCCHHHHHHHhcccccc-----cCHHHHHHHHHHHHHHHHHhCCCCC---CceEEEcCCcHHHHHHHHHHhcC-----
Confidence 3345677777777666431 2455567788899999999998621 13489999999999888776521
Q ss_pred HHhcCCCCCCCeEEecCCCcchH--HHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l 221 (369)
++|++++++|+++ ...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|+
T Consensus 75 ----------d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 143 (353)
T 2yrr_A 75 ----------GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPG-EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPA 143 (353)
T ss_dssp ----------CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTT-SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCH
T ss_pred ----------CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCH
Confidence 4789999899874 5566778999999999864 78999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 301 (369)
++|.++|+++ ++++|+|++|+.+..+ .++...++|.+++++|||+++|.|+|+++++++ .. ..+.
T Consensus 144 ~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~-~~l~ 208 (353)
T 2yrr_A 144 EAIGALAKEA------GALFFLDAVTTLGMLP-------FSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLE-AR-KAFT 208 (353)
T ss_dssp HHHHHHHHHH------TCEEEEECTTTTTTSC-------CCHHHHTCSEEECCTTSTTCCCSSCEEEEECHH-HH-HHCC
T ss_pred HHHHHHHHHc------CCeEEEEcCccccccc-------ccccccCceEEEecCcccccCCCceEEEEECHH-HH-HHhc
Confidence 9999999999 9999999999744321 122222579999999999999999999998653 21 1111
Q ss_pred cccCc-cC-----CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 302 FHINY-LG-----SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 302 ~~~~y-~~-----~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
....+ .. .........++.+.....++..+++.+..+|++++ +..++++++++.|++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 275 (353)
T 2yrr_A 209 GKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARG 275 (353)
T ss_dssp CCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC
Confidence 00101 00 00000111245555556667788888877778777 89999999999998864
No 26
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=1e-23 Score=201.83 Aligned_cols=259 Identities=15% Similarity=0.091 Sum_probs=186.5
Q ss_pred CCChHHHHHHHHHHhccCCCCCCC-C---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDMDE-Y---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~~~-~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
+++++.+.+++.++++....++.. + ........++++++++++|+++ ..+++|+||++|+..++.+++...
T Consensus 11 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~~ 85 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSP-----SEIFFTSCATESINWILKTVAETF 85 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCG-----GGEEEESCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCC-----CeEEEECCHHHHHHHHHHhhhhhc
Confidence 355688888888887653222211 1 2335666778888999999875 248999999999999999886310
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccC
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (369)
...+++|+++.++|+++...+ +..|++++.+|++++ +.+|+++|++++++++++|+++.++||||.+
T Consensus 86 ---------~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 155 (384)
T 1eg5_A 86 ---------EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR-GVVKLEELEKLVDEDTFLVSIMAANNEVGTI 155 (384)
T ss_dssp ---------TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTT-SCBCHHHHHHHCCTTEEEEEEESBCTTTCBB
T ss_pred ---------cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCC-CccCHHHHHHHhCCCCeEEEEECCCCCcccc
Confidence 001468999999999887666 667999999998864 8999999999999889999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCC--ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 219 EDVKLLHDLLTKKNEETGWD--TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~--~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
.|+++|.++|+++ + +++|+|++|+.+..+ .++...++|.++.++||++ +|.|+|+++++++-.+
T Consensus 156 ~~~~~i~~l~~~~------~~~~~li~Dea~~~~~~~-------~~~~~~~~di~~~s~sK~~-g~~G~G~~~~~~~~~~ 221 (384)
T 1eg5_A 156 QPVEDVTRIVKKK------NKETLVHVDAVQTIGKIP-------FSLEKLEVDYASFSAHKFH-GPKGVGITYIRKGVPI 221 (384)
T ss_dssp CCHHHHHHHHHHH------CTTCEEEEECTTTTTTSC-------CCCTTTCCSEEEEEGGGGT-SCTTCEEEEECTTSCC
T ss_pred cCHHHHHHHHHhc------CCceEEEEEhhhhcCCcc-------cCchhcCCCEEEecHHHhc-CCCceEEEEEcCCCcc
Confidence 9999999999999 9 999999998743221 2233226899999999984 6777899998754211
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
... +.+.........++.+.....+++.+|+.+ .+++.++ +..++++++.+.|++.|
T Consensus 222 ~~~------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g 280 (384)
T 1eg5_A 222 RPL------IHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMNLG 280 (384)
T ss_dssp CCS------BCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccc------cccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 111 111100000112444444455556666654 3456666 88899999999998855
No 27
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=1.5e-24 Score=208.77 Aligned_cols=258 Identities=12% Similarity=0.030 Sum_probs=189.2
Q ss_pred CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
.++++.+.+++.+.+... + ++.......++++++++++|.+++ ..+++|+||++|+..++.++..+
T Consensus 28 ~~~~~~v~~a~~~~~~~~---~--~~~~~~~~~~l~~~la~~~g~~~~----~~i~~~~g~t~a~~~~~~~~~~~----- 93 (393)
T 2huf_A 28 SNAPQRVLDAMSRPILGH---L--HPETLKIMDDIKEGVRYLFQTNNI----ATFCLSASGHGGMEATLCNLLED----- 93 (393)
T ss_dssp CCCCHHHHHHTTSCCCCT---T--SHHHHHHHHHHHHHHHHHHTCCCS----EEEEESSCHHHHHHHHHHHHCCT-----
T ss_pred CCCCHHHHHHHHhhhccC---C--CHHHHHHHHHHHHHHHHHhCCCCC----cEEEEcCcHHHHHHHHHHHHhCC-----
Confidence 345577777776655431 2 334556777889999999998752 24789999999999998887431
Q ss_pred HhcCCCCCCCeEEecCCCcchH--HHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHH
Q 017569 146 KEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 222 (369)
+++|+++.++|+++ ...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 94 --------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~ 164 (393)
T 2huf_A 94 --------GDVILIGHTGHWGDRSADMATRYGADVRVVKSKVG-QSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLE 164 (393)
T ss_dssp --------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred --------CCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC-CCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHH
Confidence 46899999999884 3345667999999999764 78999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
+|.++|+++ ++++|+|++++.+..+ .++...++|.++.++|||+++|.|.|++++++ +.. ..+..
T Consensus 165 ~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~-~~~-~~~~~ 229 (393)
T 2huf_A 165 GVGALCHQH------NCLLIVDTVASLGGAP-------MFMDRWEIDAMYTGSQKVLGAPPGITPVSFSH-RAV-ERYKR 229 (393)
T ss_dssp THHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCSEEECCSSSTTCCCSSCEEEEECH-HHH-HHHHT
T ss_pred HHHHHHHHc------CCEEEEEcccccCCCC-------cchhhcCccEEEECCCcccccCCCeEEEEECH-HHH-HHHhh
Confidence 999999999 9999999998754321 22333368999999999998899999999863 222 12111
Q ss_pred c----cCc----------cCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 303 H----INY----------LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 ~----~~y----------~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. .+| .+.........++.+....+++..+++.+..+|+.++ +..++++++++.|++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 304 (393)
T 2huf_A 230 RNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGF 304 (393)
T ss_dssp CSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 121 1111001111245555556666678887766677776 888999999999998753
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=2.8e-25 Score=212.70 Aligned_cols=258 Identities=16% Similarity=0.006 Sum_probs=192.2
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
|.++++.+.+++.+.+... .++...++.+++++++++++|++.+ ...+++|+||++|+. ++.++..
T Consensus 10 p~~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~la~~~~~~~~---~~~v~~~~g~t~al~-~~~~~~~----- 75 (384)
T 3zrp_A 10 PTTIKEDVLVAGLENNVGF-----TSKEFVEALAYSLKGLRYVMGASKN---YQPLIIPGGGTSAME-SVTSLLK----- 75 (384)
T ss_dssp CSCCCHHHHHHTTCCSCCT-----TSHHHHHHHHHHHHHHHHHHTCCTT---SEEEEEESCHHHHHH-HGGGGCC-----
T ss_pred CCCCCHHHHHHhhcccccc-----ccHHHHHHHHHHHHHHHHHhCCCCC---CcEEEEcCCcHHHHH-HHHhhcC-----
Confidence 3445677777665544321 2345577788899999999999852 134899999999998 8776533
Q ss_pred HHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l 221 (369)
.+++|++++++|++ +...++..|++++.+|++.+ +.+|+++|++++++ ++++|++++++||+|.+.|+
T Consensus 76 --------~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 146 (384)
T 3zrp_A 76 --------PNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPG-DYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPV 146 (384)
T ss_dssp --------TTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTT-CCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCH
T ss_pred --------CCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCC-CCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcH
Confidence 14689999999966 66777888999999999874 79999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccc-
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL- 300 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~- 300 (369)
++|.++|+++ ++++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. ..+
T Consensus 147 ~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~ 211 (384)
T 3zrp_A 147 KDVINKIRKY------VELIVVDGVSSVGAEE-------VKAEEWNVDVYLTASQKALGSAAGLGLLLLSPK-AL-SILD 211 (384)
T ss_dssp HHHHHHHGGG------EEEEEEECTTTTTTSC-------CCTTTTTCSEEEEETTSTTCCCSSEEEEEECHH-HH-HHHH
T ss_pred HHHHHHHHhc------CCEEEEECcccccCcc-------ccccccCCCEEEecCcccccCCCceEEEEECHH-HH-HHhc
Confidence 9999999999 9999999999865431 223333689999999999988999999998653 21 111
Q ss_pred cc--ccCccCCC-------CC----CccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 301 VF--HINYLGSD-------QP----TFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 301 ~~--~~~y~~~~-------~~----~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ...|.... .. .....|+.+....+++.+++..+..+|++++ +..++++++.+.|++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 286 (384)
T 3zrp_A 212 SQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG 286 (384)
T ss_dssp HCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 00 00000000 00 0001136666667777788888887888877 89999999999999875
No 29
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.93 E-value=1.9e-24 Score=208.47 Aligned_cols=262 Identities=17% Similarity=0.092 Sum_probs=186.8
Q ss_pred cCCChHHHHHHHHHHhccCCCCC----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDM----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
++++++.+.+++.+++.....++ .......++.+++++++++++|+++ ..+++|+||++|+.+++.+++..
T Consensus 29 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~g~t~al~~~~~~l~~~ 103 (400)
T 3vax_A 29 TTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEP-----DELIFTSGATESNNIALLGLAPY 103 (400)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCG-----GGEEEESCHHHHHHHHHHTTHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCC-----CcEEEeCCHHHHHHHHHHHHHHh
Confidence 34556778888887765322211 1122345677889999999999975 24899999999999999987621
Q ss_pred HHHHHHhcCCCCCCC-eEEecCCCcchHHHHHhh---hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 141 WQQKRKEQGKPYDKP-NIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~-~Vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
... + ++ +|+++.++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|+++.++||+|
T Consensus 104 ~~~----~-----gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG 173 (400)
T 3vax_A 104 GER----T-----GRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPS-GRISVEGVMERLRPDTLLVSLMHVNNETG 173 (400)
T ss_dssp HHH----H-----TCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTT-CCCCHHHHHTTCCTTEEEEECCSBCTTTC
T ss_pred hcc----C-----CCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCC-CCcCHHHHHHhcCCCceEEEEECCCCCce
Confidence 110 1 46 899999999998776665 4999999999874 89999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEE-EeCCCC
Q 017569 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV-WRTKDD 295 (369)
Q Consensus 217 ~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~-~~~~~~ 295 (369)
.+.|+++|.++|+++ ++++++|++|+.+.. ..++... +|.++.++||+ ++|.|.|+++ ++++..
T Consensus 174 ~~~~l~~i~~la~~~------~~~li~D~a~~~~~~-------~~~~~~~-~d~~~~s~~K~-~g~~g~g~~~~~~~~~~ 238 (400)
T 3vax_A 174 VIQPVAELAQQLRAT------PTYLHVDAAQGYGKV-------PGDLTTP-IDMISISGHKI-GAPKGVGALVTRRREEM 238 (400)
T ss_dssp BBCCHHHHHHHHTTS------SCEEEEECTTTTTTS-------GGGGGSC-CSEEEEETGGG-TSCSSCEEEEECBCSSS
T ss_pred eeCcHHHHHHHHHhc------CCEEEEEhhhhcCCC-------CcChhhc-CcEEEEeHHHh-CCCCceEEEEEecchhc
Confidence 999999999999999 999999999986443 2233323 89999999995 5788999999 887433
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHH
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVI 357 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~ 357 (369)
..........+.+.........++.+....+++..++..+. ++++++ +..++++++.+.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~ 301 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLA 301 (400)
T ss_dssp TTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhC
Confidence 21000001111111110111124444444455556666543 466666 88999999999998
No 30
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=1.6e-24 Score=208.01 Aligned_cols=259 Identities=10% Similarity=0.022 Sum_probs=191.2
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
|...++.+.+++.+.+. .+ .++...++..++++++++++|.+.. ..+++|+||++|+..++.++..+
T Consensus 31 p~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~gg~~al~~~~~~~~~~---- 97 (393)
T 3kgw_A 31 PSNLAPRVLAAGSLRMI---GH--MQKEMLQIMEEIKQGIQYVFQTRNP----LTLVVSGSGHCAMETALFNLLEP---- 97 (393)
T ss_dssp CCCCCHHHHHHTTCCCC---CT--TSHHHHHHHHHHHHHHHHHHTCCCS----EEEEESCCTTTHHHHHHHHHCCT----
T ss_pred CCCCCHHHHHHhccccc---Cc--ccHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCCcHHHHHHHHHhcCCC----
Confidence 33445666666544221 11 2345567778899999999998741 24789999999999988887432
Q ss_pred HHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l 221 (369)
+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|++++++ ++++|+++.++||||.+.|+
T Consensus 98 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 167 (393)
T 3kgw_A 98 ---------GDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG-EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPL 167 (393)
T ss_dssp ---------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred ---------CCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccH
Confidence 4689998888763 46778888999999999875 68999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 301 (369)
++|.++|+++ ++++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.+.
T Consensus 168 ~~i~~l~~~~------~~~li~De~~~~g~~~-------~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~-~~~~ 232 (393)
T 3kgw_A 168 DGFGELCHRY------QCLLLVDSVASLGGVP-------IYMDQQGIDIMYSSSQKVLNAPPGISLISFNDK-AK-YKVY 232 (393)
T ss_dssp TTHHHHHHHT------TCEEEEECTTTTTTSC-------CCTTTTTCCEEEEESSSTTCCCSSCEEEEECHH-HH-HHHH
T ss_pred HHHHHHHHHc------CCEEEEECCccccCcc-------cchhhcCCCEEEecCcccccCCCceeEEEECHH-HH-HHHh
Confidence 9999999999 9999999998754331 223334689999999999989999999998643 11 1111
Q ss_pred c-ccC-------------ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 302 F-HIN-------------YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 302 ~-~~~-------------y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. ... +.++........++.+....+++..++..+..++++++ +..++++++++.|++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 308 (393)
T 3kgw_A 233 SRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL 308 (393)
T ss_dssp TCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 000 11111111112245556666777788888877888877 899999999999998854
No 31
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=4.7e-24 Score=205.51 Aligned_cols=257 Identities=9% Similarity=0.040 Sum_probs=187.5
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
++++.+.+++.+.+.. .+ ++.......++++.+++++|.+++ ..+++|+||++|+..++.++..+
T Consensus 28 ~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~~------ 92 (396)
T 2ch1_A 28 NCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENR----ATMCVSGSAHAGMEAMLSNLLEE------ 92 (396)
T ss_dssp CCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCS----CEEEESSCHHHHHHHHHHHHCCT------
T ss_pred CCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCC----cEEEECCcHHHHHHHHHHHhcCC------
Confidence 3456666666554422 12 333345566788889999999752 14889999999999998887432
Q ss_pred hcCCCCCCCeEEecCCCcchHH--HHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
+++|+++.++|.++. ..++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|+++
T Consensus 93 -------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 164 (396)
T 2ch1_A 93 -------GDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPD-RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEG 164 (396)
T ss_dssp -------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTT
T ss_pred -------CCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCC-CCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHH
Confidence 468999999999884 477888999999999864 88999999999998 8999999999999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 303 (369)
|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++++|.|+|++++++. .+ ..+...
T Consensus 165 i~~l~~~~------~~~li~Dea~~~g~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~~~ 229 (396)
T 2ch1_A 165 VGQICHQH------DCLLIVDAVASLCGVP-------FYMDKWEIDAVYTGAQKVLGAPPGITPISISPK-AL-DVIRNR 229 (396)
T ss_dssp HHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCCEEECCCC-CCCCCSSCEEEEECHH-HH-HHHHTC
T ss_pred HHHHHHHc------CCEEEEEccccccCCc-------cchhhcCcCEEEEcCCccccCCCCeEEEEECHH-HH-Hhhhhc
Confidence 99999999 9999999999854321 233333679999999999999999999988652 22 111110
Q ss_pred ---c-C-c---------cCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 304 ---I-N-Y---------LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 304 ---~-~-y---------~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. . + ...........++.+.....++..+++.+..++++++ +..++++++.+.|++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 303 (396)
T 2ch1_A 230 RTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGL 303 (396)
T ss_dssp SSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 0 0 0 1100000112245555555667778887766778777 889999999999988753
No 32
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=3.5e-24 Score=205.64 Aligned_cols=261 Identities=12% Similarity=-0.034 Sum_probs=189.1
Q ss_pred cCCChHHHHHHHHHHhccCC-CCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HH
Q 017569 65 TTWMEPECDKLVMASINKNY-VDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KR 139 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~-~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~ 139 (369)
+++.++.+.+++.+.+.... .++. .++.......++++.+++++|.++ ..+++|+||++|+..++.++ ..
T Consensus 25 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~ 99 (390)
T 1elu_A 25 QGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDP-----NTITITDNVTTGCDIVLWGLDWH 99 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCG-----GGEEEESSHHHHHHHHHHHSCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCH-----HHEEEeCChHHHHHHHHhCCCCC
Confidence 34455678888877765421 1111 223323455678888999999875 24899999999999998886 22
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHH----HhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.+++|+++.++|.++... ++..|++++.+|++. +++.+|+++|++++++++++|++++++||
T Consensus 100 -------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~np 166 (390)
T 1elu_A 100 -------------QGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWN 166 (390)
T ss_dssp -------------TTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTT
T ss_pred -------------CCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccC
Confidence 146899999999986643 567799999999863 34899999999999988999999999999
Q ss_pred cccCCCHHHHHHHHH----HhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 215 TGEFEDVKLLHDLLT----KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 215 tG~~~~l~~I~~l~~----~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
||.+.|+++|.++|+ ++ ++++|+|++|+.+..+ .++...++|.++.++|||+++|.|+|++++
T Consensus 167 tG~~~~~~~i~~l~~~~~~~~------~~~li~Dea~~~g~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~ 233 (390)
T 1elu_A 167 TGQVLPLAEIMAVCRRHQGNY------PVRVLVDGAQSAGSLP-------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYI 233 (390)
T ss_dssp TCCBCCHHHHHHHHHHCCSSS------CCEEEEECTTTBTTBC-------CCTTTSCCSEEEEESSSTTCCCTTCEEEEE
T ss_pred CceecCHHHHHHHHhhhhhhc------CcEEEEEcccccCCcC-------CChhhcCCCEEEccccccccCCCceEEEEE
Confidence 999999999999999 89 9999999999864331 223334689999999999999999999998
Q ss_pred eCCCCcccccccc-cCccC------C------C-CCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHH
Q 017569 291 RTKDDLPDELVFH-INYLG------S------D-QPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSS 353 (369)
Q Consensus 291 ~~~~~~~~~~~~~-~~y~~------~------~-~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~ 353 (369)
+++ .. ..+... ..+.. . . ...+ ..++.+....+++..+++.+..+| ++++ +..++++++.
T Consensus 234 ~~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~ 310 (390)
T 1elu_A 234 HGD-CL-GEINPTYVGWRSITYGAKGEPTGWAEGGKRF-EVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLW 310 (390)
T ss_dssp CTT-TG-GGCCCCSCCTTTEEECTTSCEEEECSGGGGG-CCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CHH-hH-hhcCCccccCCcccccccCcccccccchHhh-CCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 753 32 222110 00000 0 0 0011 124555555566778888776666 7666 8899999999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|++.
T Consensus 311 ~~L~~~ 316 (390)
T 1elu_A 311 RGLNQL 316 (390)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999987
No 33
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.92 E-value=9.9e-24 Score=206.95 Aligned_cols=306 Identities=12% Similarity=0.029 Sum_probs=198.6
Q ss_pred ccccccccchhHhhhCCCCCCCCCCCCHHHHHHHHHHhhhhcCC-CCccccccccCC-ChHHHHHHH--HHHhcc-CCCC
Q 017569 12 EILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTW-MEPECDKLV--MASINK-NYVD 86 (369)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~-p~~~l~~~~~~~-~~~~v~~~~--~~~~~~-n~~~ 86 (369)
++|+++|...|-.-+....++| .+.+..++++++......+.. ....++.+.+.. .++.+.+++ ...+.. ++..
T Consensus 21 ~~~~~~~~~~p~~~~~~~~~lp-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~ 99 (438)
T 1wyu_A 21 ASLEDLFAHLPKEILSPPIDLP-EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQ 99 (438)
T ss_dssp SSTGGGGTTSCGGGSSCCCCCC-CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCS
T ss_pred CCHHHHHHhCcHHHhcCCCCCC-CCCCHHHHHHHHHHHHhcCcCccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCc
Confidence 4677888776543222245788 889999999988776543322 222233333322 344454444 233322 2333
Q ss_pred CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 017569 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (369)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s 166 (369)
+..+++..++++++++++++++|++. ..+++++|++.++..++.+++.. .+++|+++.++|++
T Consensus 100 ~~~~~g~~~~~~~~~~~la~~~g~~~-----~~i~~~~g~taa~ea~~~a~~~~------------~gd~Viv~~~~h~s 162 (438)
T 1wyu_A 100 PEVSQGVLQATFEYQTMIAELAGLEI-----ANASMYDGATALAEGVLLALRET------------GRMGVLVSQGVHPE 162 (438)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHTSSE-----ECSCBSSHHHHHHHHHHHHHHHH------------TCCEEEEETTSCHH
T ss_pred chhhhhHHHHHHHHHHHHHHHhCCCc-----cceEEeCcHHHHHHHHHHHHhcC------------CCCEEEEcCccCHh
Confidence 33467888999999999999999975 23688999994433333332211 14799999999999
Q ss_pred HHHHH----hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE
Q 017569 167 WEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 167 ~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
+...+ +..|++++.+|++ ++.+|+++ |+++|++|++++| |++|.+.|+++|+++|+++ ++|+|
T Consensus 163 ~~~~~~~~a~~~G~~v~~v~~~--~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~------g~~vi 229 (438)
T 1wyu_A 163 YRAVLRAYLEAVGAKLLTLPLE--GGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGA------GALFV 229 (438)
T ss_dssp HHHHHHHHHHHTTCEEEEECCB--TTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHT------TCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCc--CCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHc------CCEEE
Confidence 87655 4579999999973 37888776 6778999999998 9999999999999999999 99999
Q ss_pred eecc-cccccccccCCCccccccCCCCcEEEEcCcc-----CCCCCCCeEEEEEeCCCCcccccccc-----cCccCCCC
Q 017569 243 VDAA-SGGFIAPFLYPDLEWDFRLPLVKSINVSGHK-----YGLVYAGVGWVVWRTKDDLPDELVFH-----INYLGSDQ 311 (369)
Q Consensus 243 vD~a-~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK-----~l~~p~g~g~l~~~~~~~~~~~~~~~-----~~y~~~~~ 311 (369)
+|.. ++.+.. ..+ ...++|++++|+|| |+++| ++|+++++++ .. +.+... ..+.+...
T Consensus 230 vd~d~~a~g~~--~~~------~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~-~~l~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 230 AVADPLSLGVL--KPP------GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FV-RQLPGRLVSETVDVEGRRG 298 (438)
T ss_dssp EECCTTGGGTB--CCH------HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GG-GGCCSCCEEEEEBTTSCEE
T ss_pred EEechhhccCc--CCC------ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HH-HhCCCceeccccccCCCcc
Confidence 6644 221111 011 12368999999998 66677 8999998753 22 222100 00000000
Q ss_pred CCc----------cccCCc-----chhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 312 PTF----------TLNFSK-----GSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 312 ~~~----------~l~~tr-----~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
..+ ...++. ....++..+..+..+|.+|++++ ++.+++++++++|++.
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 363 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEV 363 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 000 001222 22223333444888999999888 8999999999999987
No 34
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.9e-24 Score=209.15 Aligned_cols=269 Identities=11% Similarity=-0.008 Sum_probs=184.9
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCC-CCCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDM-DEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~-~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
|....+.++++.+.+++.+.++....++ ..++ .......++++++++++|+++ ..+++|+|+++++..++.
T Consensus 30 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~al~~~~~ 104 (406)
T 3cai_A 30 FDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADP-----GGVVLGADRAVLLSLLAE 104 (406)
T ss_dssp CBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESCHHHHHHHHHH
T ss_pred EeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCChHHHHHHHHH
Confidence 3333344566788888888776532221 1122 245667788899999999874 248999999999988877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh----hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++...+ ..+++|+++.++|.++...+.. .|++++.+|++++++.+|+++|++++++++++|+++++
T Consensus 105 ~l~~~~----------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 174 (406)
T 3cai_A 105 ASSSRA----------GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSA 174 (406)
T ss_dssp HTGGGG----------BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESB
T ss_pred HHhhcc----------CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCC
Confidence 652110 0146899999999886555443 69999999998445899999999999989999999999
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE-EEEE
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG-WVVW 290 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g-~l~~ 290 (369)
+||||.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++ +|. +| ++++
T Consensus 175 ~nptG~~~~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-g~~-~G~~~~~ 239 (406)
T 3cai_A 175 SGTLGGVTDLRAMTKLVHDV------GALVVVDHSAAAPYRL-------LDIRETDADVVTVNAHAWG-GPP-IGAMVFR 239 (406)
T ss_dssp CTTTCBBCCCHHHHHHHHHT------TCEEEEECTTTTTTCC-------CCHHHHCCSEEEEEGGGGT-SCS-CEEEEES
T ss_pred cCCccccCCHHHHHHHHHHc------CCEEEEEcccccCCCC-------CCchhcCCCEEEeehhhhc-CCC-cCeEEEE
Confidence 99999999999999999999 9999999999854331 1222225899999999986 465 77 8877
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh--------------hHHHH--HhhHHHHHHHH
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--------------VIPSF--CCVDHKKLSSF 354 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~--------------G~~~~--~~~~~a~~l~~ 354 (369)
+++ .. ..+.....+.+.........++.+....+++.++++.+... +++++ +..++++++.+
T Consensus 240 ~~~-~~-~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (406)
T 3cai_A 240 DPS-VM-NSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMV 317 (406)
T ss_dssp CHH-HH-HTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehH-HH-hhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 542 21 11111110111100000112555555445555666655432 35555 78899999999
Q ss_pred HHHhcC
Q 017569 355 FVIHSS 360 (369)
Q Consensus 355 ~L~~~g 360 (369)
.|++.+
T Consensus 318 ~L~~~~ 323 (406)
T 3cai_A 318 SLRSLP 323 (406)
T ss_dssp HHHTCT
T ss_pred HHhcCC
Confidence 999863
No 35
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=7.3e-24 Score=205.44 Aligned_cols=272 Identities=17% Similarity=0.083 Sum_probs=193.7
Q ss_pred CccccccccCCChHHHHHHHHHHhccCCCCCC----CCc-chHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCCchHHH
Q 017569 57 RLNLASFVTTWMEPECDKLVMASINKNYVDMD----EYP-VTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 57 ~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~----~~~-~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~ 130 (369)
.++|....+++.++.+.+++.++++....++. .++ .......++++.+++++|. ++ ..+++|+||++|+
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~-----~~v~~~~g~t~a~ 103 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP-----REIVYTRNATEAI 103 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG-----GGEEEESSHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCC-----CeEEEcCChHHHH
Confidence 34566655656668888888887765321111 111 1235556788889999998 43 3489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEE
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICV 206 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v 206 (369)
.+++.+++... -..+++|+++.++|.+ +...++..|++++.+|+++ ++.+|+++|++++++++++|
T Consensus 104 ~~~~~~~~~~~---------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v 173 (420)
T 1t3i_A 104 NLVAYSWGMNN---------LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE-QESFDLEHFKTLLSEKTKLV 173 (420)
T ss_dssp HHHHHHTHHHH---------CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT-TSSBCHHHHHHHCCTTEEEE
T ss_pred HHHHHHhhhcc---------cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC-CCCcCHHHHHHhhCCCceEE
Confidence 99999874210 0014689999999998 6677788899999999985 48899999999999999999
Q ss_pred EEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
++++++||+|.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||. ++|.|+|
T Consensus 174 ~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK~-~~~~g~G 239 (420)
T 1t3i_A 174 TVVHISNTLGCVNPAEEIAQLAHQA------GAKVLVDACQSAPHYP-------LDVQLIDCDWLVASGHKM-CAPTGIG 239 (420)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEEGGGT-TSCTTCE
T ss_pred EEeCCcccccCcCCHHHHHHHHHHc------CCEEEEEhhhccCCcc-------CchhhcCCCEEEEehhhh-cCCCceE
Confidence 9999999999999999999999999 9999999999865431 122222589999999995 5788899
Q ss_pred EEEEeCCCCcccccccc-cCccC-----C-----CCCCccc-cCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHH
Q 017569 287 WVVWRTKDDLPDELVFH-INYLG-----S-----DQPTFTL-NFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLS 352 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~-~~y~~-----~-----~~~~~~l-~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l 352 (369)
+++++++ .. ..+... ..+.. . ....... .++.+....++++.+++.+...|+.++ +..++++++
T Consensus 240 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (420)
T 1t3i_A 240 FLYGKEE-IL-EAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYL 317 (420)
T ss_dssp EEEECHH-HH-HHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEchH-HH-hhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9988642 21 111110 00000 0 0000001 245555556666667888876677777 889999999
Q ss_pred HHHHHhc
Q 017569 353 SFFVIHS 359 (369)
Q Consensus 353 ~~~L~~~ 359 (369)
.+.|++.
T Consensus 318 ~~~L~~~ 324 (420)
T 1t3i_A 318 WQGLGQI 324 (420)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 9999987
No 36
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=1.6e-23 Score=202.01 Aligned_cols=270 Identities=15% Similarity=0.060 Sum_probs=191.8
Q ss_pred ccccccccCCChHHHHHHHHHHhccCCCCCCCC--c---chHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCCchHHHH
Q 017569 58 LNLASFVTTWMEPECDKLVMASINKNYVDMDEY--P---VTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 58 ~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~--~---~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
.+|....+++.++.+.+++.+.+.....++..+ . .......++++++++++|. ++ ..+++|+||++|+.
T Consensus 25 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-----~~v~~~~g~t~a~~ 99 (406)
T 1kmj_A 25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSA-----EELVFVRGTTEGIN 99 (406)
T ss_dssp EECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG-----GGEEEESSHHHHHH
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCC-----CeEEEeCChhHHHH
Confidence 344444455566788888888876543222211 1 2345566788889999998 33 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH----HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEE
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~ 207 (369)
+++.+++... -..+++|+++.++|++. ...++..|++++.+|++++ +.+|+++|++++++++++|+
T Consensus 100 ~~~~~~~~~~---------~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~v~ 169 (406)
T 1kmj_A 100 LVANSWGNSN---------VRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPTLFDEKTRLLA 169 (406)
T ss_dssp HHHHHTHHHH---------CCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT-SCBCGGGHHHHCCTTEEEEE
T ss_pred HHHHHhhhhc---------CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC-CCcCHHHHHHHhccCCeEEE
Confidence 9999874210 01146899999998753 4456778999999999864 88999999999998999999
Q ss_pred EeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEE
Q 017569 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (369)
Q Consensus 208 ~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~ 287 (369)
+++++||||.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...+.|.++.++||++ +|.|+|+
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~~~~~g~~~-------~~~~~~~~d~~~~s~~K~~-g~~G~G~ 235 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQH------GAKVLVDGAQAVMHHP-------VDVQALDCDFYVFSGHKLY-GPTGIGI 235 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEEGGGTT-SCTTCEE
T ss_pred EeCCCccccCcCCHHHHHHHHHHc------CCEEEEEchhhcCCCC-------CcccccCCCEEEEEchhcc-CCCCcEE
Confidence 999999999999999999999999 9999999999865432 1222226899999999987 7888999
Q ss_pred EEEeCCCCcccccccccCccCCC--------------CCCcc-ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHH
Q 017569 288 VVWRTKDDLPDELVFHINYLGSD--------------QPTFT-LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKK 350 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~~~--------------~~~~~-l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~ 350 (369)
++++++ .. ..+.. . ..++. ..... ..++.+....+++..+++.+..++++++ +..++++
T Consensus 236 ~~~~~~-~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 311 (406)
T 1kmj_A 236 LYVKEA-LL-QEMPP-W-EGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMH 311 (406)
T ss_dssp EEECHH-HH-HHCCC-S-SCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEEeHH-HH-hhcCC-c-ccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 998632 21 11111 0 00000 00000 1245555555566677777766677777 7889999
Q ss_pred HHHHHHHhcC
Q 017569 351 LSSFFVIHSS 360 (369)
Q Consensus 351 ~l~~~L~~~g 360 (369)
++.+.|++.+
T Consensus 312 ~l~~~L~~~~ 321 (406)
T 1kmj_A 312 YALSQLESVP 321 (406)
T ss_dssp HHHHHHTTST
T ss_pred HHHHHHhcCC
Confidence 9999998863
No 37
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=1.8e-23 Score=199.60 Aligned_cols=253 Identities=14% Similarity=0.049 Sum_probs=179.3
Q ss_pred CChHHHHHHHHHHhccCC----C-CCCCCcchHHHHHHHHHH-HHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY----V-DMDEYPVTTELQNRCVNM-IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~----~-~~~~~~~~~~le~~~~~~-la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
++++.+.+++.+.+.... . .+...........+++++ +++++|.+ .+++|+||++|+..++.++..+
T Consensus 20 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~ 92 (371)
T 2e7j_A 20 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-------VARVTNGAREAKFAVMHSLAKK 92 (371)
T ss_dssp CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-------EEEEESSHHHHHHHHHHHHCCT
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-------EEEEeCChHHHHHHHHHHHhCC
Confidence 456778888887765431 0 011111223344567778 88999886 3899999999999999887432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe--ccCCccccCHHHHHHHHh-----hcCcEEEEeeCCC
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK--LEEGYYVMNPVKAVELVD-----ENTICVAAILGST 213 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~--~~~~~~~~d~~~L~~~i~-----~~~~~v~~~~~~~ 213 (369)
+++|+++.++|+++..+++..|++++.+| ++++ +.+|+++|+++++ +++++|++++++|
T Consensus 93 -------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~n 158 (371)
T 2e7j_A 93 -------------DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPDG 158 (371)
T ss_dssp -------------TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSCT
T ss_pred -------------CCEEEEccCcchHHHHHHHHcCCeEEEeecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCCC
Confidence 46999999999999999999999999999 7764 8999999999998 6789999999999
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
|+|.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++++|.++|+++++++
T Consensus 159 ptG~~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 159 NYGNLPDVKKIAKVCSEY------DVPLLVNGAYAIGRMP-------VSLKEIGADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp TTCCCCCHHHHHHHHHTT------TCCEEEECTTTBTTBC-------CCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred CCcccCCHHHHHHHHHHc------CCeEEEECccccCCCC-------CChhhcCCCEEEecCCcCCCCCCCcEEEEEech
Confidence 999999999999999999 9999999999976542 112212578999999999988889999998764
Q ss_pred CCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-Hh--hHHHHHHHHHHHhcC
Q 017569 294 DDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CC--VDHKKLSSFFVIHSS 360 (369)
Q Consensus 294 ~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~--~~~a~~l~~~L~~~g 360 (369)
.....+.... .+... ..+ ..++.+.....++..+++.+.. ... +. .++++++++.|++.|
T Consensus 226 -~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~~ 289 (371)
T 2e7j_A 226 -WAEIVLRRSEKYKNKE--VEL-LGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKLG 289 (371)
T ss_dssp -TTTTTTCBCSSCTTSB--GGG-TTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHTT
T ss_pred -hhhhhccccccCcccc--ccc-ccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcC
Confidence 2211021111 11110 000 0234444445555566666543 223 77 899999999999874
No 38
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=8.6e-24 Score=200.15 Aligned_cols=254 Identities=11% Similarity=0.060 Sum_probs=183.8
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
|.++++.+.+++.+.+.. ..++.......++++++++++|.++ ..+++|+||++|+..++.++..+
T Consensus 9 p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~-----~~i~~~~g~t~a~~~~~~~~~~~---- 74 (352)
T 1iug_A 9 PVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEG-----EVLILTGSGTLAMEALVKNLFAP---- 74 (352)
T ss_dssp SCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSS-----EEEEEESCHHHHHHHHHHHHCCT----
T ss_pred CCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCC-----ceEEEcCchHHHHHHHHHhccCC----
Confidence 445567888888777642 1244555667788899999999874 24899999999999998887431
Q ss_pred HHhcCCCCCCCeEEecCCCcchHH--HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~ 222 (369)
+++|+++.++|+++. ..++..|++++.+|++++ +.+|+++|++ +++++|++++++||||.+.|++
T Consensus 75 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~ 141 (352)
T 1iug_A 75 ---------GERVLVPVYGKFSERFYEIALEAGLVVERLDYPYG-DTPRPEDVAK---EGYAGLLLVHSETSTGALADLP 141 (352)
T ss_dssp ---------TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCTTTSCC---SSCSEEEEESEETTTTEECCHH
T ss_pred ---------CCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHhc---cCCcEEEEEEecCCcceecCHH
Confidence 468999999999965 444567999999999764 7899998877 6789999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
+|.++|++++. ++++|+|++|+.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. ..+..
T Consensus 142 ~i~~l~~~~~~----~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~-~~~~~ 208 (352)
T 1iug_A 142 ALARAFKEKNP----EGLVGADMVTSLLVGE-------VALEAMGVDAAASGSQKGLMCPPGLGFVALSPR-AL-ERLKP 208 (352)
T ss_dssp HHHHHHHHHCT----TCEEEEECTTTBTTBC-------CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHH-HH-HTCCC
T ss_pred HHHHHHHhhCC----CCEEEEECCccccCcc-------eeccccCeeEEEecCcccccCCCceeEEEECHH-HH-HHhhC
Confidence 99999999833 7999999999754332 122222689999999999999999999998653 11 11100
Q ss_pred c-----c-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 303 H-----I-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 303 ~-----~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
. . .+..... .....++.+.....++..++..+... ++++ +..++++++.+.|++.|
T Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g 272 (352)
T 1iug_A 209 RGYYLDLARELKAQK-EGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEGG 272 (352)
T ss_dssp CSSTTCHHHHHHHHT-TTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceeeHHHHHhhcc-cCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC
Confidence 0 0 0000000 00112455554455666777776555 6666 88899999999999864
No 39
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.91 E-value=6.5e-23 Score=200.16 Aligned_cols=276 Identities=16% Similarity=0.091 Sum_probs=188.7
Q ss_pred ccccccCCChHHHHHHHHHHhccCCCCCC-CC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 60 LASFVTTWMEPECDKLVMASINKNYVDMD-EY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 60 l~~~~~~~~~~~v~~~~~~~~~~n~~~~~-~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
|....++++++.+.+++.+.+.....++. .+ ....++..++++++++++|+++ ..+++|+||++|+.+++.
T Consensus 22 Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~ 96 (432)
T 3a9z_A 22 MDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKP-----QDIIFTSGGTESNNLVIH 96 (432)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESCHHHHHHHHHH
T ss_pred eeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCc-----CeEEEeCChHHHHHHHHH
Confidence 33333445567888888887754322221 12 2455677889999999999864 248999999999999999
Q ss_pred HHHHHHHHHHHhcCCCC--------CCCeEEecCCCcchHHHHH----hhhcceeEEEeccCCccccCHHHHHHHHhhcC
Q 017569 136 AFKRKWQQKRKEQGKPY--------DKPNIVTGANVQVCWEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENT 203 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~--------~~~~Vi~s~~~h~s~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~ 203 (369)
++.+.+......+|..+ ..+.|+++..+|.++...+ +..|++++.+|++++++.+|+++|++++++++
T Consensus 97 ~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~ 176 (432)
T 3a9z_A 97 STVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTT 176 (432)
T ss_dssp HHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTE
T ss_pred HHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCc
Confidence 88642211000122110 1147888888888875554 34689999999976347899999999999899
Q ss_pred cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC----------ceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD----------TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~----------~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
++|++++++||||.+.|+++|.++|+++ + +++|+|++|+.+.. ..++...++|+++.
T Consensus 177 ~~v~~~~~~nptG~~~~~~~i~~l~~~~------~~~~~~~~~~~~~livDea~~~~~~-------~~~~~~~~~d~~~~ 243 (432)
T 3a9z_A 177 CLVTIMLANNETGVIMPISEISRRIKAL------NQIRAASGLPRVLVHTDAAQALGKR-------RVDVEDLGVDFLTI 243 (432)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHH------HHHHHHHTCCCCEEEEECTTTTTTS-------CCCHHHHCCSEEEE
T ss_pred eEEEEECcccCcccccCHHHHHHHHHhc------CcccccccCCceEEEEEchhhhCCc-------ccChhhcCCCEEEE
Confidence 9999999999999999999999999999 7 99999999976432 12222226899999
Q ss_pred cCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHH
Q 017569 274 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKL 351 (369)
Q Consensus 274 ~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~ 351 (369)
++|||+ +|. +|++++++.... ..+ ...+.++........++.+.....++.++++.+. ++++++ +..+++++
T Consensus 244 s~~K~~-g~~-~G~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~~ 317 (432)
T 3a9z_A 244 VGHKFY-GPR-IGALYVRGVGKL-TPL--YPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRDY 317 (432)
T ss_dssp EGGGTT-CCS-CEEEEETTBTTT-BCC--CCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred ehhHhc-CCc-ceEEEEcccccc-CCc--CceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 999987 565 999998754211 111 1122221110111124555544555556666553 467766 88999999
Q ss_pred HHHHHHhc
Q 017569 352 SSFFVIHS 359 (369)
Q Consensus 352 l~~~L~~~ 359 (369)
+.+.|++.
T Consensus 318 l~~~L~~~ 325 (432)
T 3a9z_A 318 LEERLEAE 325 (432)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999884
No 40
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=1.5e-23 Score=200.54 Aligned_cols=259 Identities=10% Similarity=0.034 Sum_probs=185.3
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
|.+.++.+.+++.+.+.. + .++...++.+++++++++++|++.+. ....+|+||++|+.+++.++..+
T Consensus 27 p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~---~~i~~~~ggt~al~~~~~~~~~~---- 94 (376)
T 3f0h_A 27 PVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS---KAVFMTCSSTGSMEAVVMNCFTK---- 94 (376)
T ss_dssp SCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC---EEEEESSCHHHHHHHHHHHHCCT----
T ss_pred CCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCChhHHHHHHHHhccCC----
Confidence 334467777776554421 1 24556678889999999999997521 22445889999999998887532
Q ss_pred HHhcCCCCCCCeEEecCCCcchHH--HHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~ 222 (369)
+++|+++.+.+++.. ..+...|++++.++++.+ +.+|+++|++++++++++|++++++||+|.+.|++
T Consensus 95 ---------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 164 (376)
T 3f0h_A 95 ---------KDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHG-KKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTM 164 (376)
T ss_dssp ---------TCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTT-CCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHH
T ss_pred ---------CCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHhhccCceEEEEecccCCcceecCHH
Confidence 467888877665533 456677999999999864 89999999999988999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
+|+++|+++ ++++|+|++++.+..+ .++...++|.++.++||++++|.|.|+++++++ .. ..+..
T Consensus 165 ~i~~l~~~~------~~~li~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~-~~~~~ 229 (376)
T 3f0h_A 165 MIGEFCKKN------NMFFVCDCVSAFLADP-------FNMNECGADVMITGSQKVLACPPGISVIVLAPR-GV-ERVEK 229 (376)
T ss_dssp HHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEETTTTTCCCSSCEEEEECHH-HH-HHHHT
T ss_pred HHHHHHHHc------CCEEEEEcCccccCcc-------ccccccCccEEEecCcccccCCCceEEEEECHH-HH-HHhhc
Confidence 999999999 9999999999875442 222223689999999999988999999887543 21 11111
Q ss_pred --ccCc-cCCC-----CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 303 --HINY-LGSD-----QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 303 --~~~y-~~~~-----~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
...+ .... .......++.+....+++.+++..+..+ |++++ +..++++++++.|++.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 298 (376)
T 3f0h_A 230 SKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP 298 (376)
T ss_dssp CCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred CCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0111 0000 0000011233333346677888888777 67777 88899999999999876
No 41
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=7.4e-23 Score=196.64 Aligned_cols=265 Identities=12% Similarity=-0.007 Sum_probs=189.8
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+.+.+. ++++.+.+++.++++.....|... ..++++++++++++.+|.+.+ ....++|+||++|+..++.
T Consensus 29 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~---~~~i~~~~g~~~a~~~~~~ 103 (391)
T 3dzz_A 29 ELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPK---EDWCVFASGVVPAISAMVR 103 (391)
T ss_dssp CEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCC---GGGEEEESCHHHHHHHHHH
T ss_pred ceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCC---HHHEEECCCHHHHHHHHHH
Confidence 3445444443 345788999998887654444332 688999999999999995532 1358999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc--CCccccCHHHHHHHHh-hcCcEEEEeeCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVD-ENTICVAAILGS 212 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~-~~~~~v~~~~~~ 212 (369)
++..+ +++|+++.++|.++...++..|++++.+|++ .+++.+|+++|+++++ +++++|+++.++
T Consensus 104 ~l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~ 170 (391)
T 3dzz_A 104 QFTSP-------------GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPH 170 (391)
T ss_dssp HHSCT-------------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSB
T ss_pred HhCCC-------------CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCC
Confidence 87432 4789999999999999999999999999985 3456799999999998 689999999999
Q ss_pred CCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C--CCCc--EEEEcCccCCC-CCC
Q 017569 213 TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--PLVK--SINVSGHKYGL-VYA 283 (369)
Q Consensus 213 ~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--~~~D--si~~~~hK~l~-~p~ 283 (369)
||||.+ +++++|+++|+++ ++++|+|++|+.+... ......+. . ...| .++.++||+++ .+.
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~ 241 (391)
T 3dzz_A 171 NPIGYAWSEEEVKRIAELCAKH------QVLLISDEIHGDLVLT---DEDITPAFTVDWDAKNWVVSLISPSKTFNLAAL 241 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCS---SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTT
T ss_pred CCCCcccCHHHHHHHHHHHHHC------CCEEEEecccccccCC---CCCceehhhcCccccCcEEEEEeChhhccccch
Confidence 999999 7899999999999 9999999999875531 11111121 1 1256 88889999985 567
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
+.|++++++++.. ..+......... ++.+.....++..++.. +.+.++++ +..++++++.+.|++
T Consensus 242 r~G~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~ 308 (391)
T 3dzz_A 242 HAACAIIPNPDLR-ARAEESFFLAGI--------GEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAK 308 (391)
T ss_dssp CCEEEECCSHHHH-HHHHHHHHHHTC--------SSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheEEEECCHHHH-HHHHHHHHhhcc--------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899988644332 222111000000 11222223444445544 44456666 788899999999988
No 42
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=2.7e-23 Score=205.23 Aligned_cols=237 Identities=9% Similarity=-0.029 Sum_probs=178.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----H
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----W 167 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s----~ 167 (369)
....+.+++++++++++|+++ ..+++|+|+++++.+++.++.++ ...+++|+++.++|++ +
T Consensus 108 ~~~~~~~~l~~~la~~~g~~~-----~~v~~t~g~t~al~~~~~~~~~~----------~~~~~~Vl~~~~~~~s~~~~~ 172 (465)
T 3e9k_A 108 PWITGDESIVGLMKDIVGANE-----KEIALMNALTVNLHLLMLSFFKP----------TPKRYKILLEAKAFPSDHYAI 172 (465)
T ss_dssp CGGGTTHHHHGGGHHHHTCCG-----GGEEECSCHHHHHHHHHHHHCCC----------CSSSCEEEEETTCCHHHHHHH
T ss_pred cHHHhHHHHHHHHHHHcCCCc-----CCEEEECCHHHHHHHHHHHhccc----------cCCCCEEEEcCCcCCchHHHH
Confidence 344556678889999999985 35899999999999988887432 1224579999999987 4
Q ss_pred HHHHhhhccee-----EEEeccCCccccCHHHHHHHHh---hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCc
Q 017569 168 EKFARYFEVEL-----KEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (369)
Q Consensus 168 ~~~~~~~G~~v-----~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~ 239 (369)
...++..|+++ ..+|.+. ++.+|+++|+++|+ +++++|++++++|+||.+.|+++|.++|+++ |+
T Consensus 173 ~~~~~~~G~~~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~------g~ 245 (465)
T 3e9k_A 173 ESQLQLHGLNIEESMRMIKPREG-EETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAK------GC 245 (465)
T ss_dssp HHHHHHTTCCHHHHEEEECCCTT-CSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHT------TC
T ss_pred HHHHHHcCCcceeeeEEEecCCC-CCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHc------CC
Confidence 44667788875 2334444 48999999999997 5789999999999999999999999999999 99
Q ss_pred eEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccc-cccCccCCC-------
Q 017569 240 PIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV-FHINYLGSD------- 310 (369)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~-~~~~y~~~~------- 310 (369)
++|+|+|++.+..+ .++...++|++++++|||++ +|.|+|+++++++ .. ..+. ....|.++.
T Consensus 246 ~vi~D~a~~~g~~~-------~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~-~~-~~~~~~~~g~~~~~~~~~~~~ 316 (465)
T 3e9k_A 246 YVGFDLAHAVGNVE-------LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK-HA-HTIKPALVGWFGHELSTRFKM 316 (465)
T ss_dssp EEEEECTTTTTTSC-------CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG-GT-TTSCCSSCCGGGBCHHHHTTC
T ss_pred EEEEEhhhhcCCcC-------CchhhcCCCEEEECcccccccCCCceEEEEEcHH-HH-hhcCCcccCccCCCCCccccc
Confidence 99999999876542 23333378999999999995 7778899998653 21 1111 111222221
Q ss_pred --CCC------ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 311 --QPT------FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 311 --~~~------~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
... ....||.+....+++++++..+...|++++ +..++++++.+.|++.
T Consensus 317 ~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 317 DNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp CSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 011357777788999999999988888888 8999999999999873
No 43
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.90 E-value=4.5e-23 Score=204.89 Aligned_cols=287 Identities=12% Similarity=0.002 Sum_probs=191.9
Q ss_pred HHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhccCC--C-----CCCCCcchHHHHHHHHHHHHHHhCCCCC
Q 017569 41 AAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--V-----DMDEYPVTTELQNRCVNMIAHLFNTPVA 113 (369)
Q Consensus 41 ~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~--~-----~~~~~~~~~~le~~~~~~la~l~g~~~~ 113 (369)
+++..+.+..... ...++|.... ++.++.+.+++.+++.+.. + .|.......++|+.+++++++++|++++
T Consensus 31 ~~~~~~~~~~~~~-~~~i~L~a~e-~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~ 108 (483)
T 1rv3_A 31 EVYDIIKKESNRQ-RVGLELIASE-NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQ 108 (483)
T ss_dssp HHHHHHHHHHHHH-HSSEECCTTC-CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHh-hcCeEEEcCC-CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcc
Confidence 3455444433221 2234443332 3456888888888775432 1 1223345688999999999999999852
Q ss_pred CCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH--------HHhhhcceeEEEec--
Q 017569 114 DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK--------FARYFEVELKEVKL-- 183 (369)
Q Consensus 114 ~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~--------~~~~~G~~v~~v~~-- 183 (369)
+ ....+.+++| +++|..++.++.++ +++|++++++|.++.. .+...|..++.+++
T Consensus 109 ~-~~~~V~~~sG-s~an~~~~~all~p-------------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 109 C-WGVNVQPYSG-SPANFAVYTALVEP-------------HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp T-EEEECCCSSH-HHHHHHHHHHHTCT-------------TCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred c-CceEEEECCc-HHHHHHHHHHhcCC-------------CCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 1 0012455555 48888878776442 4799999988877643 34455644555655
Q ss_pred cCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc
Q 017569 184 EEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (369)
Q Consensus 184 ~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (369)
+++++.+|+++|+++++ ++|++|++ +++|++ .+.|+++|+++|+++ ++++++|+||+.+..+. +.....
T Consensus 174 ~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~------g~~livD~ah~~g~~~~--~~~~~p 243 (483)
T 1rv3_A 174 NPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADEN------GAYLMADMAHISGLVVA--GVVPSP 243 (483)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHT------TCEEEEECTTTHHHHHH--TSSCCG
T ss_pred ccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHc------CCEEEEEccchhccccc--CCCCCC
Confidence 64568999999999998 78999998 888887 888999999999999 99999999987554421 111111
Q ss_pred ccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccc----cCc-----cCCCCCCccccCCcchhHHHHHHHHHH
Q 017569 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH----INY-----LGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (369)
Q Consensus 263 ~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~----~~y-----~~~~~~~~~l~~tr~~~~~l~~~~~l~ 333 (369)
+.++|.++.++||++.+|.| |+++++++.. . +... ..| +... ......|+......+++.++++
T Consensus 244 --~~~~div~~s~~K~l~Gprg-G~i~~~~~~~-~--~~~~~g~~~~y~~~~~~~~~-~~~~~~g~~~~~~iaal~~Al~ 316 (483)
T 1rv3_A 244 --FEHCHVVTTTTHKTLRGCRA-GMIFYRRGVR-S--VDPKTGKEILYNLESLINSA-VFPGLQGGPHNHAIAGVAVALK 316 (483)
T ss_dssp --GGTCSEEEEESSGGGCCCSC-EEEEEECSBC-C---------CCBCCHHHHHHHH-HTTTTCCSCCHHHHHHHHHHHH
T ss_pred --CCCCcEEEecCcccCCCCCc-eEEEEcchhh-h--hccccCcchhhHHHHHhhhh-cCCcccCCccHHHHHHHHHHHH
Confidence 23689999999999988888 9999986421 0 0000 000 0000 0011235666666677778888
Q ss_pred HhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 334 RLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 334 ~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+..++++++ +..++++++++.|.+.|+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 346 (483)
T 1rv3_A 317 QAMTPEFKEYQRQVVANCRALSAALVELGY 346 (483)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhChhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8877788777 899999999999998764
No 44
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=8.6e-23 Score=193.96 Aligned_cols=259 Identities=10% Similarity=-0.014 Sum_probs=180.4
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchH-HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTT-ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~-~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
|...++.+.+++.+.+. ++ ++... ....++++++++++|.+.+ ...+++|+||++|+..++.+++.+
T Consensus 12 p~~~~~~v~~a~~~~~~----~~--~~~~~~~~~~~l~~~la~~~g~~~~---~~~v~~~~g~t~a~~~~~~~~~~~--- 79 (366)
T 1m32_A 12 PLTTSRTVKEAMLFDSC----TW--DDDYNIGVVEQIRQQLTALATASEG---YTSVLLQGSGSYAVEAVLGSALGP--- 79 (366)
T ss_dssp SCCCCHHHHHTTCCCCC----TT--SHHHHTTTHHHHHHHHHHHHCSSSS---EEEEEEESCHHHHHHHHHHHSCCT---
T ss_pred CcCCCHHHHHHHhhhhc----CC--CHHHHHHHHHHHHHHHHHHhCCCCc---CcEEEEecChHHHHHHHHHHhcCC---
Confidence 44456777776655331 11 12111 3445666778899983211 124899999999999998887431
Q ss_pred HHHhcCCCCCCCeEEe-cCCCcch-HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh--cCcEEEEeeCCCCcccCC
Q 017569 144 KRKEQGKPYDKPNIVT-GANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFE 219 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~-s~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~ 219 (369)
+++|++ +.++|.+ +..++...|++++.+|++++ +.+|+++|++++++ ++++|+++.++||||.+.
T Consensus 80 ----------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 148 (366)
T 1m32_A 80 ----------QDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLN 148 (366)
T ss_dssp ----------TCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEEC
T ss_pred ----------CCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceec
Confidence 345554 4577875 66778888999999999764 78999999999987 478999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccc
Q 017569 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 220 ~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 299 (369)
|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. ..
T Consensus 149 ~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~-~~-~~ 213 (366)
T 1m32_A 149 PIDEVGALAHRY------GKTYIVDAMSSFGGIP-------MDIAALHIDYLISSANKCIQGVPGFAFVIAREQ-KL-AA 213 (366)
T ss_dssp CHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHH-HH-TT
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccCcC-------ccccccCccEEEecCcccccCCCceEEEEECHH-HH-Hh
Confidence 999999999999 9999999999864432 223223689999999999988999999998753 11 11
Q ss_pred cccc-cCccCCC--------CCCccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 300 LVFH-INYLGSD--------QPTFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 300 ~~~~-~~y~~~~--------~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+... ..|.... .......++.+....+++..+++.+...| +.++ +..++++++.+.|++.|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~ 287 (366)
T 1m32_A 214 CKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGF 287 (366)
T ss_dssp CTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCC
Confidence 1110 0111000 00000113454555566777888777666 7766 889999999999998753
No 45
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=9.9e-23 Score=195.98 Aligned_cols=268 Identities=10% Similarity=-0.023 Sum_probs=190.4
Q ss_pred CCCCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
++..++|..+.+. +.++.+.+++.+.++.....|...++..++++++.+++.+.+|.+.+. ..+++|+||++|+..
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~~~a~~~ 105 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA---DNILVTNGGKQSIFN 105 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GGEEEESHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHH
Confidence 3444455555443 245778888888876544455555678999999999999999975421 358999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++..+ +++|+++.++|.++...++..|++++.+|+++ +++.+|+++|++++++++++|++++|
T Consensus 106 ~~~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 172 (388)
T 1j32_A 106 LMLAMIEP-------------GDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTP 172 (388)
T ss_dssp HHHHHCCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHhcCC-------------CCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCC
Confidence 98887432 46899999999999999999999999999875 24789999999999988999999999
Q ss_pred CCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc--ccccc--CCCCcEEEEcCccCCC-CCC
Q 017569 212 STLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL--EWDFR--LPLVKSINVSGHKYGL-VYA 283 (369)
Q Consensus 212 ~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~--~~~~Dsi~~~~hK~l~-~p~ 283 (369)
+||||.+ +++++|+++|+++ ++++|+|++|+.+... .... ...+. ..+.|.+..++||+++ .+.
T Consensus 173 ~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 244 (388)
T 1j32_A 173 SNPTGMVYTPDEVRAIAQVAVEA------GLWVLSDEIYEKILYD--DAQHLSIGAASPEAYERSVVCSGFAKTYAMTGW 244 (388)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTT
T ss_pred CCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhcccC--CCCCCCHHHccccccCCEEEEeechhccCCccc
Confidence 9999998 4599999999999 9999999999875431 1110 01111 1347889999999984 224
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.+|+++.+++ .. ..+...... . .+ +. ..+.+++++..+ +.+.++++ +..++.+++.+.|++.
T Consensus 245 r~G~~~~~~~-~~-~~l~~~~~~--~---~~----~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 245 RVGFLAGPVP-LV-KAATKIQGH--S---TS----NV---CTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp CCEEEECCHH-HH-HHHHHHHHT--T---TC----SC---CHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCHH-HH-HHHHHHHhh--c---cc----CC---CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4899987532 21 221110000 0 00 11 123344443433 34456665 7888999999999887
No 46
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=1.9e-23 Score=200.17 Aligned_cols=265 Identities=12% Similarity=-0.014 Sum_probs=180.0
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..++.+.+++.+.+.. . .++.......+++++++++++....- +...+++|+||++|+.+++.++...+
T Consensus 15 ~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~v~~~~g~t~al~~~~~~~~~~~----- 83 (385)
T 2bkw_A 15 ILSGAVQKALDVPSLG---H--TSPEFVSIFQRVLKNTRAVFKSAAAS-KSQPFVLAGSGTLGWDIFASNFILSK----- 83 (385)
T ss_dssp CCCHHHHHTTSCCCCC---T--TSHHHHHHHHHHHHHHHHHTTCCGGG-TCEEEEEESCTTHHHHHHHHHHSCTT-----
T ss_pred CchHHHHHHHhccccc---c--CCHHHHHHHHHHHHHHHHHhCCCCCC-CCceEEEcCchHHHHHHHHHHHhccC-----
Confidence 3456666666544432 1 13444445556777788888764210 01358999999999999988874100
Q ss_pred hcCCCCCCCeEEecCC-Cc-chHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHH
Q 017569 147 EQGKPYDKPNIVTGAN-VQ-VCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h-~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 222 (369)
..+++|++++. .+ .++...++..|++++.+|+ +. ++.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 84 -----~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~ 157 (385)
T 2bkw_A 84 -----APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI-GESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLK 157 (385)
T ss_dssp -----CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST-TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHH
T ss_pred -----CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC-CCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHH
Confidence 01467777644 33 3334677888999999999 65 488999999999988 899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc-
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV- 301 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~- 301 (369)
+|.++|++++. ++++|+|++|+.+..+ .++...++|.++.++|||+++|.|.|+++++++ .+...+.
T Consensus 158 ~i~~~~~~~~~----~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~-~~~~~l~~ 225 (385)
T 2bkw_A 158 AISQAIKQTSP----ETFFVVDAVCSIGCEE-------FEFDEWGVDFALTASQKAIGAPAGLSISLCSSR-FMDYALND 225 (385)
T ss_dssp HHHHHHHHHCT----TSEEEEECTTTTTTSC-------CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHH-HHHHHTCH
T ss_pred HHHHHHHhhCC----CCEEEEECccccCCcc-------ccccccCceEEEecCccccccCCcceEEEEcHH-HHHHHHhh
Confidence 99999999822 6999999999854331 223333689999999999999999999998653 2110110
Q ss_pred ----cccCccCC-----------CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHH-HhcC
Q 017569 302 ----FHINYLGS-----------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFV-IHSS 360 (369)
Q Consensus 302 ----~~~~y~~~-----------~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L-~~~g 360 (369)
....|... ........++.+....+++..+++.+...|+.++ +..++++++.+.| ++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 302 (385)
T 2bkw_A 226 SKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ 302 (385)
T ss_dssp HHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00011000 0000001135555556677778887766678776 8889999999999 7765
No 47
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=6.6e-23 Score=194.63 Aligned_cols=256 Identities=13% Similarity=0.036 Sum_probs=186.1
Q ss_pred CChHHHHHHHHHHhccCCC-CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
..++.+.+++.+++..... ....++...++.+++++++++++|.+.. ..+++|+||++|+.+++.++..
T Consensus 14 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~v~~~~g~t~al~~~~~~l~~------ 83 (362)
T 3ffr_A 14 ELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN----YEVLFLASATEIWERIIQNCVE------ 83 (362)
T ss_dssp CCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT----EEEEEESCHHHHHHHHHHHHCS------
T ss_pred CCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCCchHHHHHHHHhccC------
Confidence 3456677777666654431 2224566778888999999999998631 3588999999999999888743
Q ss_pred HhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHH
Q 017569 146 KEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
+.+++..+.|++ +...++..|++++.++++.+ +.+|+++|+ ++++|++|++++++||||.+.|+++
T Consensus 84 ---------~~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~ 151 (362)
T 3ffr_A 84 ---------KKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFG-KGFYPADIT--VPADAEIICLTHNETSSGVSMPVED 151 (362)
T ss_dssp ---------SEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHH
T ss_pred ---------CcEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCC-CCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHH
Confidence 255555555555 34466778999999999764 899999998 7788999999999999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc-
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~- 302 (369)
|+++|++++ ++++|+|++|+.+..+ .++ ..+|.++.++|||+++|.|.|+++++++ .. ..+..
T Consensus 152 i~~la~~~p-----~~~li~D~a~~~~~~~-------~~~--~~~d~~~~s~~K~~~~~~G~g~~~~~~~-~~-~~~~~~ 215 (362)
T 3ffr_A 152 INTFRDKNK-----DALIFVDAVSSLPYPK-------FDW--TKIDSVFFSVQKCFGLPAGLGVWILNDR-VI-EKSKAL 215 (362)
T ss_dssp HTTSGGGST-----TSEEEEECTTTTTSSC-------CCT--TSCSEEEEETTSTTCCCSCCEEEEEEHH-HH-HHHHHH
T ss_pred HHHHHHhCC-----CCEEEEecccccCCcc-------cCh--hHCcEEEEecccccCCCCceEEEEECHH-HH-HHhhhc
Confidence 999999874 7999999998865431 122 2389999999999988999999887653 21 11110
Q ss_pred c-----cCccCCC------CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 303 H-----INYLGSD------QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 303 ~-----~~y~~~~------~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
. ..+.... .......++.+.....++..+++.+..+|+.++ +..++++++++.|++.+
T Consensus 216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 286 (362)
T 3ffr_A 216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSK 286 (362)
T ss_dssp HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0 0000000 000111356666667778888888877788777 89999999999999883
No 48
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=2.4e-22 Score=193.82 Aligned_cols=269 Identities=14% Similarity=-0.017 Sum_probs=192.4
Q ss_pred CCCCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
++..++|....+. +.++.+.+++.+.+......|...++..++++++.+++.+.+|.+.+ ...+++|+||++|+..
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~---~~~v~~~~g~t~al~~ 116 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDIS---PDQVVVTNGAKQALFN 116 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCC---GGGEEEESHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---HHHEEEecCHHHHHHH
Confidence 3444455555443 33577888888888654444544567899999999999988887531 1358999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
++.++..+ +++|++++++|.++...++..|++++.+|+++ +++.+|+++|++++++++++|+++++
T Consensus 117 ~~~~l~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 183 (389)
T 1o4s_A 117 AFMALLDP-------------GDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSP 183 (389)
T ss_dssp HHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESS
T ss_pred HHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCC
Confidence 98887431 46899999999999999999999999999875 34789999999999888999999999
Q ss_pred CCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeE
Q 017569 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVG 286 (369)
Q Consensus 212 ~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g 286 (369)
+||||.+.| +++|+++|+++ ++++++|++|+.+...- .+.....+. ..+.|.++.++||+++ .+.++|
T Consensus 184 ~nptG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 256 (389)
T 1o4s_A 184 NNPTGVVYRREFLEGLVRLAKKR------NFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVG 256 (389)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCcccceE
Confidence 999999866 99999999999 99999999999755410 000011121 2468999999999985 334589
Q ss_pred EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++++++ +.. ..+....... . .+- ..+.+++++..+.. +++++ +..++.+++.+.|++.|
T Consensus 257 ~l~~~~-~~~-~~l~~~~~~~-----~----~~~---~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~g 317 (389)
T 1o4s_A 257 YLISSE-KVA-TAVSKIQSHT-----T----SCI---NTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKMG 317 (389)
T ss_dssp EEECCH-HHH-HHHHHHHHHH-----T----CSC---CHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeCH-HHH-HHHHHHhhhc-----c----cCC---CHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998743 221 2211100000 0 011 23445555566643 35555 78889999999998865
No 49
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.90 E-value=4.7e-22 Score=194.24 Aligned_cols=230 Identities=12% Similarity=-0.036 Sum_probs=174.0
Q ss_pred HHHHHHHHHHhhhhcCCCCccccccccC-CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCC
Q 017569 39 KEAAYQVINDELMLDGNPRLNLASFVTT-WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (369)
...++..........++..++|+...+. ++++.+.+++.+++..+. ..|....+..++++++.+++.+.+|.+.+
T Consensus 28 ~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~--- 104 (437)
T 3g0t_A 28 IRDLVALVTNLEKATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIP--- 104 (437)
T ss_dssp HHHHHHHHHHHHHHHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCC---
T ss_pred HHHHHHHHHHHHHhcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCC---
Confidence 3444444443333344555566655554 345788888888886544 44555556789999999999998887642
Q ss_pred CCCeEEeCCchHHHHHHHHHHH--HHHHHHHHhcCCCCCCC--eEEecCCCcchHHHHHhhhcceeEEEeccCCccccCH
Q 017569 117 TAVGVGTVGSSEAIMLAGLAFK--RKWQQKRKEQGKPYDKP--NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP 192 (369)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~--~~~~~~~~~~g~~~~~~--~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (369)
...+++|+||++|+.+++.++. .+ ++ +|+++.++|.++...++..|++++.+|++++++.+|+
T Consensus 105 ~~~i~~t~g~t~al~~~~~~l~~~~~-------------gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~ 171 (437)
T 3g0t_A 105 ARACVPTVGSMQGCFVSFLVANRTHK-------------NREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLR 171 (437)
T ss_dssp GGGEEEESHHHHHHHHHHHHHTTSCT-------------TCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHH
T ss_pred cccEEEeCCHHHHHHHHHHHHhcCCC-------------CCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCH
Confidence 2468999999999999988875 32 45 8999999999999999999999999999765578999
Q ss_pred HHHHHHH-hhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-------c
Q 017569 193 VKAVELV-DENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-------W 261 (369)
Q Consensus 193 ~~L~~~i-~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-------~ 261 (369)
++|++++ ++++++|+++.|+||||.+.+ +++|+++|+++ ++++|+|++|+.+... ..... .
T Consensus 172 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~ 243 (437)
T 3g0t_A 172 EKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKH------DVIVIEDLAYFGMDFR--KDYSHPGEPLYQP 243 (437)
T ss_dssp HHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCCTT--SCCCSTTSSCCCC
T ss_pred HHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC------CcEEEEEcchhhcccC--CCcCcccccchhh
Confidence 9999999 778999999999999999976 77789999999 9999999999875442 11000 1
Q ss_pred ccc-CCCCcEEEEcCccCCC-CCCCeEEEEEeC
Q 017569 262 DFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (369)
Q Consensus 262 ~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~ 292 (369)
.+. ....+.++.+.+|+++ .+.+.|+++.++
T Consensus 244 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 276 (437)
T 3g0t_A 244 SVANYTDNYILALSSSKAFSYAGQRIGVLMISG 276 (437)
T ss_dssp CGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH
T ss_pred ccCCCCCcEEEEEcCccCCCCccceeEEEEECH
Confidence 222 2456788889999986 556789998853
No 50
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.89 E-value=5.6e-22 Score=190.75 Aligned_cols=269 Identities=12% Similarity=-0.009 Sum_probs=188.0
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCC-eEEeCCchHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV-GVGTVGSSEAIMLAGL 135 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~-~~~t~Ggt~a~~~al~ 135 (369)
++|....+. ++++.+.+++.+.++.....|....+..++++++.+++.+.+|.+.+ ... +++|+||++|+..++.
T Consensus 29 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~---~~~~v~~~~g~~~a~~~~~~ 105 (389)
T 1gd9_A 29 ISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEAD---PKTEIMVLLGANQAFLMGLS 105 (389)
T ss_dssp EECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC---TTTSEEEESSTTHHHHHHHT
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---CCCeEEEcCChHHHHHHHHH
Confidence 345544444 34577888888887654444544557899999999999998896532 135 8999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
++..+ +++|+++.++|.++...++..|++++.+|+++ +++.+|+++|++++++++++|++++++||
T Consensus 106 ~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~np 172 (389)
T 1gd9_A 106 AFLKD-------------GEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNP 172 (389)
T ss_dssp TTCCT-------------TCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred HhCCC-------------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCC
Confidence 76331 46899999999999999999999999999875 34789999999999888899999999999
Q ss_pred cccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 215 tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
||.+. ++++|+++|+++ ++++|+|++|+.+...--.+..-..+. ..+.|.++.++||+++ .+.++|+++
T Consensus 173 tG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 246 (389)
T 1gd9_A 173 TGAVLTKKDLEEIADFVVEH------DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246 (389)
T ss_dssp TCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEE
T ss_pred CCcCCCHHHHHHHHHHHHHc------CCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEE
Confidence 99985 599999999999 999999999997654100000011111 2357889999999985 334579998
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh--hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~--G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++ +.. ..+.....+. . ++.+.....++..+|+. +.+ .++++ +..++.+++.+.|++.|
T Consensus 247 ~~~-~~~-~~l~~~~~~~-----~----~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 309 (389)
T 1gd9_A 247 APS-WII-ERMVKFQMYN-----A----TCPVTFIQYAAAKALKD-ERSWKAVEEMRKEYDRRRKLVWKRLNEMG 309 (389)
T ss_dssp CCH-HHH-HHHHHHHTTT-----T----CSCCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ECH-HHH-HHHHHHHhhh-----c----cCCCHHHHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 753 222 2221111100 0 12222222222233332 233 55665 78899999999998875
No 51
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=5.3e-22 Score=192.48 Aligned_cols=259 Identities=16% Similarity=-0.001 Sum_probs=179.1
Q ss_pred CCChHHHHHHHHHHhccCCCCCCCC----cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 66 TWMEPECDKLVMASINKNYVDMDEY----PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 66 ~~~~~~v~~~~~~~~~~n~~~~~~~----~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
++.++.+.+++.+++......+... .+......++++++++++|+++ ..+++|+||++++..++.+++...
T Consensus 38 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~al~~al~~~~~~~ 112 (416)
T 1qz9_A 38 GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARD-----GEVVVTDTTSINLFKVLSAALRVQ 112 (416)
T ss_dssp CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCT-----TSEEECSCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCc-----ccEEEeCChhHHHHHHHHhhcccc
Confidence 3455677888888776433222110 1223555678888999999874 248889999999988888765210
Q ss_pred HHHHHhcCCCCCCC-eEEecCCCcchHHHHHh----hh--cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 142 QQKRKEQGKPYDKP-NIVTGANVQVCWEKFAR----YF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 142 ~~~~~~~g~~~~~~-~Vi~s~~~h~s~~~~~~----~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.. ..+ ++ .|+++..+|.++..++. .. |++++.+|+ +++|++++++++++|++++++||
T Consensus 113 -~~-~~~-----gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~~~l~~~i~~~~~~v~~~~~~np 177 (416)
T 1qz9_A 113 -AT-RSP-----ERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--------PEELPQAIDQDTAVVMLTHVNYK 177 (416)
T ss_dssp -HH-HST-----TCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--------GGGHHHHCSTTEEEEEEESBCTT
T ss_pred -cc-cCC-----CCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--------HHHHHHHhCCCceEEEEeccccC
Confidence 00 001 23 46777789987655433 34 888888876 67788999888999999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCe-EEEEEeCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV-GWVVWRTK 293 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~-g~l~~~~~ 293 (369)
||.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++++++++ |+++++++
T Consensus 178 tG~~~~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 178 TGYMHDMQALTALSHEC------GALAIWDLAHSAGAVP-------VDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ 244 (416)
T ss_dssp TCBBCCHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT
T ss_pred cccccCHHHHHHHHHHc------CCEEEEEccccccCcC-------CChhhcCCCEEEecCcccCCCCCCCeEEEEECHH
Confidence 99999999999999999 9999999999854331 1222125899999999999888888 99998754
Q ss_pred CCccccccc-ccCccCCCC-------------CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHH
Q 017569 294 DDLPDELVF-HINYLGSDQ-------------PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVI 357 (369)
Q Consensus 294 ~~~~~~~~~-~~~y~~~~~-------------~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~ 357 (369)
.. ..+.. ...|.+... ......++.+....+++.++++.+..++++++ +..++++++.+.|+
T Consensus 245 -~~-~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (416)
T 1qz9_A 245 -LC-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVE 322 (416)
T ss_dssp -TT-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HH-hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 22 11111 111111100 00011245556556777788888877788777 89999999999998
Q ss_pred hc
Q 017569 358 HS 359 (369)
Q Consensus 358 ~~ 359 (369)
+.
T Consensus 323 ~~ 324 (416)
T 1qz9_A 323 QR 324 (416)
T ss_dssp HH
T ss_pred hh
Confidence 86
No 52
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.89 E-value=9.4e-22 Score=189.11 Aligned_cols=269 Identities=13% Similarity=-0.019 Sum_probs=189.6
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCCchHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~ 135 (369)
++|....+. ++++.+.+++.++++.....|....+..++++++.+++.+.+|.+.+. . .+++|+||++|+..++.
T Consensus 33 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~---~~~v~~~~g~~~a~~~~~~ 109 (386)
T 1u08_A 33 INLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA---DSDITVTAGATEALYAAIT 109 (386)
T ss_dssp EECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT---TTTEEEESSHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CCCEEEcCChHHHHHHHHH
Confidence 344444443 345778888888876533444444578999999999999998975321 3 58999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++..+ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++++|||
T Consensus 110 ~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 176 (386)
T 1u08_A 110 ALVRN-------------GDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPS 176 (386)
T ss_dssp HHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCC
Confidence 87431 46899999999999999999999999999976458899999999998889999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-ccc-CCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|.+.| +++|+++|+++ ++++|+|++|+.+...- .+...+ .+. ..+.|.++.++||+++ .+.++|+++
T Consensus 177 G~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 249 (386)
T 1u08_A 177 ATVWQQADFAALWQAIAGH------EIFVISDEVYEHINFSQ-QGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCV 249 (386)
T ss_dssp CCCCCHHHHHHHHHHHTTS------CCEEEEECTTTTCBCCS-SCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEE
T ss_pred CccCCHHHHHHHHHHHHHc------CcEEEEEccccccccCC-CCCcChhcccCccCcEEEEecchhhcCCcccceEEEE
Confidence 99864 78999999999 99999999998754310 000011 111 2367889999999986 334589998
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+++ +.. +.+.....+. . ++.+.....++..+|+.. .+.++++ +..++.+++.+.|++.|+
T Consensus 250 ~~~-~~~-~~l~~~~~~~-----~----~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~ 311 (386)
T 1u08_A 250 APA-PIS-AEIRKVHQYL-----T----FSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRL 311 (386)
T ss_dssp CCH-HHH-HHHHHHHHHH-----T----SSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSC
T ss_pred cCH-HHH-HHHHHHHHhh-----c----cCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 753 221 2221111000 0 122222223333444433 4456665 788899999999988653
No 53
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.89 E-value=6.4e-23 Score=196.80 Aligned_cols=261 Identities=11% Similarity=-0.061 Sum_probs=188.3
Q ss_pred ccccCCChHHHHHHHHHHhcc---CCCC----CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHH
Q 017569 62 SFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (369)
Q Consensus 62 ~~~~~~~~~~v~~~~~~~~~~---n~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~a 133 (369)
.+.+.+.|+.|.+++.+.+.+ |... ...++...++.+++++.+++++|++.+ ..+++ |+|||+++.++
T Consensus 18 ~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~----~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 18 LYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN----YKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp EECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT----EEEEEESSHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----CeEEEEcCchHHHHHHH
Confidence 344556678899998887743 2111 112345677788999999999999742 34777 57999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
+..+..+ ..+++|++...+|++ +.+.++..|+.++.++++.+ +..++++++.+++++|++|.+++.
T Consensus 94 ~~~l~~~-----------~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~-~~~~~~~~~~~i~~~t~lV~~~h~ 161 (377)
T 3e77_A 94 PLNLIGL-----------KAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGS-YTKIPDPSTWNLNPDASYVYYCAN 161 (377)
T ss_dssp HHHHGGG-----------STTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSS-SCSCCCGGGCCCCTTCSCEEEESE
T ss_pred HHhccCC-----------CCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCC-cCCCCChHHhccCCCccEEEEeCc
Confidence 8877531 013577777666665 33455667888877787653 566777788788889999999999
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
+|.+|.+.|+ +|+++ ++++|||++++.+.. +++++ ..|.+++++|||+ +|.|.|++++|
T Consensus 162 et~tG~~~pi-----i~~~~------~~~~~vD~~q~~g~~-------~id~~--~~~~~~~s~~K~~-gp~G~g~l~~~ 220 (377)
T 3e77_A 162 ETVHGVEFDF-----IPDVK------GAVLVCDMSSNFLSK-------PVDVS--KFGVIFAGAQKNV-GSAGVTVVIVR 220 (377)
T ss_dssp ETTTTEECSS-----CCCCT------TCCEEEECTTTTTSS-------CCCGG--GCSEEEEEGGGTT-SCTTCEEEEEE
T ss_pred cCchheEchh-----hhccC------CCEEEEEcccccCCC-------CCchh--hcCEEEEeccccc-CCCccEEEEEc
Confidence 9999999998 47778 999999999987665 34444 2345889999999 79999999998
Q ss_pred CCCCcccccccccCccC--CCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 292 TKDDLPDELVFHINYLG--SDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~--~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++-.. ..-...+.|+. .........+|.+...++++..+++.+..+ |++.+ +..+++++++++|++++
T Consensus 221 ~~~l~-~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~ 293 (377)
T 3e77_A 221 DDLLG-FALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQ 293 (377)
T ss_dssp TTSCS-CCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHHh-hccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 75321 11001122221 000112234788888889999999999888 89988 99999999999999984
No 54
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=5.6e-22 Score=192.50 Aligned_cols=269 Identities=12% Similarity=0.021 Sum_probs=189.6
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCCchHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~ 135 (369)
++|....+. ++++.+.+++.++++.....|....+..++++++.+++.+.+|.+.+. . .+++|+||++|+.+++.
T Consensus 28 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~~v~~t~g~~~al~~~~~ 104 (411)
T 2o0r_A 28 VNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP---ETEVLVTVGATEAIAAAVL 104 (411)
T ss_dssp EESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT---TTSEEEEEHHHHHHHHHHH
T ss_pred eeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC---CceEEEeCCHHHHHHHHHH
Confidence 445444443 345778888888886543445445568899999999999999975321 2 58999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC--ccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
++..+ +++|+++.++|.++...++..|++++.+|++++ ++.+|+++|++++++++++|+++.++|
T Consensus 105 ~~~~~-------------gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~n 171 (411)
T 2o0r_A 105 GLVEP-------------GSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHN 171 (411)
T ss_dssp HHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCT
T ss_pred HhcCC-------------CCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCC
Confidence 87432 468999999999999999999999999998653 478999999999988899999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
|+|.+.| +++|+++|+++ ++++++|++|+.+...--.+..-..+. ..+.|.++.+++|+++ .+..+|++
T Consensus 172 ptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 245 (411)
T 2o0r_A 172 PTGAVLSATELAAIAEIAVAA------NLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWA 245 (411)
T ss_dssp TTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEE
Confidence 9999855 68999999999 999999999987653100000001111 2367899999999985 23448999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++ ++.. ..+.....+.. ++.+.....++..+|+. +.+.++++ +..++.+++.+.|++.|
T Consensus 246 ~~~-~~~~-~~l~~~~~~~~---------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g 307 (411)
T 2o0r_A 246 CGP-AELI-AGVRAAKQYLS---------YVGGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEIG 307 (411)
T ss_dssp ECC-HHHH-HHHHHHHHHHT---------SCCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeC-HHHH-HHHHHHHhhcc---------CCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 874 2222 22211111110 11112223333444543 35566666 78889999999998765
No 55
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=3.3e-21 Score=185.65 Aligned_cols=281 Identities=12% Similarity=0.032 Sum_probs=190.7
Q ss_pred HHHHHHHHHhhhhcCCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 017569 40 EAAYQVINDELMLDGNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (369)
.++.+...+. ..+++..++|+.+.+.. .++.+.+++.++++.....|....+..++++++.+++.+.+|.+.+ ..
T Consensus 17 ~~~~~~~~~~-~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~ 92 (391)
T 3h14_A 17 MDVMEAARRA-EEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLD---PG 92 (391)
T ss_dssp HHHHHHHHHH-HHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCC---GG
T ss_pred HHHHHHHHHH-HhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCC---HH
Confidence 3444433332 23445556666665543 3577899998888765555555557889999999999999996542 24
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVE 197 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~ 197 (369)
.+++|+||++|+..++.++..+ +++|+++.++|..+...++..|++++.+|++++ ++.+|+++|++
T Consensus 93 ~v~~t~g~~~al~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (391)
T 3h14_A 93 RVVITPGSSGGFLLAFTALFDS-------------GDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAG 159 (391)
T ss_dssp GEEEESSHHHHHHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTT
T ss_pred HEEEecChHHHHHHHHHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHh
Confidence 5899999999999998887442 468999999999999999999999999999753 36889999988
Q ss_pred HHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 198 LVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 198 ~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+ ++++|+++.|+||||.+.| +++|+++|+++ ++++|+|++|+.+... ............+.++.+
T Consensus 160 ~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~i~~~s 227 (391)
T 3h14_A 160 L---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ------GASFISDEIYHGIEYE---AKAVTALELTDECYVINS 227 (391)
T ss_dssp S---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBSS---SCCCCGGGTCSSSEEEEE
T ss_pred c---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEECcchhcccC---CCCcChhhcCCCEEEEEe
Confidence 7 7899999999999999976 88999999999 9999999999875531 111111112344566668
Q ss_pred CccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHH
Q 017569 275 GHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKL 351 (369)
Q Consensus 275 ~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~ 351 (369)
.+|+++ .+.+.|+++.+++ .. ..+....... . ++.+.....++.+++. +.+.+.++ +..++.++
T Consensus 228 ~sK~~g~~G~r~G~~~~~~~-~~-~~~~~~~~~~-----~----~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~ 294 (391)
T 3h14_A 228 FSKYFSMTGWRVGWMVVPED-QV-RVVERIAQNM-----F----ICAPHASQVAALAALD--CDAELQANLDVYKANRKL 294 (391)
T ss_dssp SSSTTCCTTSCCEEEECCGG-GH-HHHHHHHHHT-----T----CCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH
T ss_pred chhccCCccceeEEEEeCHH-HH-HHHHHHHhhh-----c----cCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHH
Confidence 999985 6677898887432 22 2221100000 0 1222222222223333 55566666 78889999
Q ss_pred HHHHHHhcCCC
Q 017569 352 SSFFVIHSSYF 362 (369)
Q Consensus 352 l~~~L~~~g~~ 362 (369)
+.+.|++.|+.
T Consensus 295 l~~~l~~~~~~ 305 (391)
T 3h14_A 295 MLERLPKAGFT 305 (391)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCCC
Confidence 99999987754
No 56
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.89 E-value=1.2e-21 Score=189.74 Aligned_cols=271 Identities=10% Similarity=0.017 Sum_probs=188.7
Q ss_pred CCCCcccccccc---C-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 54 GNPRLNLASFVT---T-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 54 ~~p~~~l~~~~~---~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
++..++|..+.+ . +.++.+.+++.+.++.....|....+..++++++.+++.+.+|.+.+. ..+++|+||++|
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~---~~v~~t~g~~~a 113 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP---DDVRVTAAVTEA 113 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GGEEEESHHHHH
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH---HHEEEcCChHHH
Confidence 444445555555 2 335778888888776544345445577899999999999988876422 358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
+.+++.++..+ +++|+++.++|.++..+++..|++++.+|+++ +++.+|+++|++++++++++|++
T Consensus 114 l~~~~~~l~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i 180 (406)
T 1xi9_A 114 LQLIFGALLDP-------------GDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAV 180 (406)
T ss_dssp HHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHhCCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEE
Confidence 99998887431 46899999999999999999999999999875 35789999999999988999999
Q ss_pred eeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-cccccCCCC-cEEEEcCccCCC-CC
Q 017569 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLV-KSINVSGHKYGL-VY 282 (369)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~-Dsi~~~~hK~l~-~p 282 (369)
++++||||.+.+ +++|.++|+++ ++++|+|++|+.+.. -.+.. ...+. ... |.++.++||+++ .+
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~~~~~--~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G 251 (406)
T 1xi9_A 181 INPNNPTGALYDKKTLEEILNIAGEY------EIPVISDEIYDLMTY--EGEHISPGSLT-KDVPVIVMNGLSKVYFATG 251 (406)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHH------TCCEEEECTTTTCBS--SSCCCCHHHHC-SSSCEEEEEESTTTTCCGG
T ss_pred ECCCCCCCCCcCHHHHHHHHHHHHHc------CCEEEEEcCcccccc--CCCCCCHHHcC-CCceEEEEeccccccCCCc
Confidence 999999999855 99999999999 999999999987543 11100 01111 345 677889999985 33
Q ss_pred CCeEEEEE-eCCC---CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHH
Q 017569 283 AGVGWVVW-RTKD---DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFV 356 (369)
Q Consensus 283 ~g~g~l~~-~~~~---~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L 356 (369)
.++|++++ .++. .+...+.....+. ++.+.....++..+|+. +.++++++ +..++.+++.+.|
T Consensus 252 ~r~G~~~~~~~~~~~~~l~~~l~~~~~~~----------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 320 (406)
T 1xi9_A 252 WRLGYMYFVDPENKLSEVREAIDRLARIR----------LCPNTPAQFAAIAGLTG-PMDYLKEYMKKLKERRDYIYKRL 320 (406)
T ss_dssp GCCEEEEEECTTCTTHHHHHHHHHHHHHT----------CCSCSHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEecCchhHHHHHHHHHHHHHhh----------cCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 45899883 2321 1212221111110 11222222333334432 34456666 7888999999999
Q ss_pred HhcC
Q 017569 357 IHSS 360 (369)
Q Consensus 357 ~~~g 360 (369)
++.+
T Consensus 321 ~~~~ 324 (406)
T 1xi9_A 321 NEIP 324 (406)
T ss_dssp HTST
T ss_pred HhCC
Confidence 8863
No 57
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.6e-22 Score=197.31 Aligned_cols=274 Identities=11% Similarity=0.021 Sum_probs=194.6
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
++..++|+.+.+.. +++.+.+++.++++. ....|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+.
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~---~~v~~t~G~~~al~ 132 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA---ENVTVTTGANEGIL 132 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG---GGEEEESHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHH
Confidence 34456777666543 357788999888865 23445455578899999999998888876421 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-----------ccccCHHHHHHHHh
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-----------YYVMNPVKAVELVD 200 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-----------~~~~d~~~L~~~i~ 200 (369)
.++.++.++ +++|+++.++|..+...++..|+.++.+|++++ ++.+|+++|+++++
T Consensus 133 ~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (447)
T 3b46_A 133 SCLMGLLNA-------------GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT 199 (447)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC
T ss_pred HHHHHHcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc
Confidence 999887542 478999999999999999999999999998753 47899999999998
Q ss_pred hcCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cc--cCCCCcEEEEc
Q 017569 201 ENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DF--RLPLVKSINVS 274 (369)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~--~~~~~Dsi~~~ 274 (369)
+++++|++++|+||||.+ +++++|+++|+++ ++++++|++|+.+... .+...+ .+ ...+.+.+..+
T Consensus 200 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~i~S 271 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKVFTREELTTLGNICVKH------NVVIISDEVYEHLYFT--DSFTRIATLSPEIGQLTLTVGS 271 (447)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCS--SCCCCGGGSCHHHHTTEEEEEE
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CcEEEEeccchhcccC--CCCcCHHHcCCCCCCcEEEEec
Confidence 889999999999999998 5699999999999 9999999999975531 110111 11 12357888899
Q ss_pred CccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHH
Q 017569 275 GHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKK 350 (369)
Q Consensus 275 ~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~ 350 (369)
++|+++ .++.+|+++.++++.. +.+.....+. . ++.+.....++..+|.....+ .++++ +..++.+
T Consensus 272 ~sK~~~~~G~riG~~~~~~~~l~-~~l~~~~~~~-----~----~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~ 341 (447)
T 3b46_A 272 AGKSFAATGWRIGWVLSLNAELL-SYAAKAHTRI-----C----FASPSPLQEACANSINDALKIGYFEKMRQEYINKFK 341 (447)
T ss_dssp HHHHTTCTTSCCEEEECSCHHHH-HHHHHHHHHH-----T----SSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CchhcCCcchhhEEEEeCCHHHH-HHHHHHHhhc-----c----CCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH
Confidence 999986 4567899987333332 2211100000 0 122222223333444443223 35555 7888899
Q ss_pred HHHHHHHhcCC
Q 017569 351 LSSFFVIHSSY 361 (369)
Q Consensus 351 ~l~~~L~~~g~ 361 (369)
++.+.|++.|+
T Consensus 342 ~l~~~L~~~g~ 352 (447)
T 3b46_A 342 IFTSIFDELGL 352 (447)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHCCC
Confidence 99999988763
No 58
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.89 E-value=5.8e-22 Score=191.23 Aligned_cols=213 Identities=13% Similarity=0.038 Sum_probs=166.9
Q ss_pred CccccccccC-CChHHHHHHHHHHhccC----CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKN----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
.++|+...+. ++++.+.+++.+.++.. ...|....+..++++++.+++++.+|.+.+ ...+++|+||++|+.
T Consensus 37 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~---~~~i~~~~g~~~al~ 113 (398)
T 3ele_A 37 VYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFN---ADNLYMTMGAAASLS 113 (398)
T ss_dssp CEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCC---GGGEEEESSHHHHHH
T ss_pred eEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCC---hHHEEEccCHHHHHH
Confidence 3455555554 34577888888877653 344445567899999999999999996542 245899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~-~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.++.++..+ + ++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|+++.
T Consensus 114 ~~~~~l~~~-------------g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 180 (398)
T 3ele_A 114 ICFRALTSD-------------AYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINS 180 (398)
T ss_dssp HHHHHHCCS-------------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECS
T ss_pred HHHHHHcCC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcC
Confidence 998887442 4 78999999999999999999999999999865689999999999998999999999
Q ss_pred CCCCcccCCC---HHHHHHHHHH------hhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-
Q 017569 211 GSTLTGEFED---VKLLHDLLTK------KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL- 280 (369)
Q Consensus 211 ~~~~tG~~~~---l~~I~~l~~~------~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~- 280 (369)
|+||||.+.+ +++|+++|++ + ++++|+|++|+.+... ....+........+.+..+.+|+++
T Consensus 181 p~nptG~~~~~~~l~~l~~~~~~~~~~~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~ 252 (398)
T 3ele_A 181 PNNPSGTVYSEETIKKLSDLLEKKSKEIGR------PIFIIADEPYREIVYD--GIKVPFVTKYYDNTLVCYSYSKSLSL 252 (398)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHHHHHTS------CCEEEEECTTTTCBCT--TCCCCCGGGTCSSEEEEEESTTTSSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhccCC------CeEEEEeccccccccC--CCCcCChHhhcCCeEEEEehhhcCCC
Confidence 9999999977 7777789998 7 9999999999875531 1111122223345677888999986
Q ss_pred CCCCeEEEEEeCC
Q 017569 281 VYAGVGWVVWRTK 293 (369)
Q Consensus 281 ~p~g~g~l~~~~~ 293 (369)
.+.+.|++++++.
T Consensus 253 ~G~r~G~~~~~~~ 265 (398)
T 3ele_A 253 PGERIGYVLVPDE 265 (398)
T ss_dssp TTTCCEEEECCTT
T ss_pred ccceeEEEEEcch
Confidence 6678899987653
No 59
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.89 E-value=2.6e-21 Score=186.26 Aligned_cols=266 Identities=12% Similarity=0.048 Sum_probs=186.4
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 55 NPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 55 ~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
...++|+.+.+.. +++.+.+++.+.+......|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+.++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~g~~~al~~~ 107 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP---EETIVTVGGSQALFNL 107 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG---GGEEEESHHHHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HHEEEcCChHHHHHHH
Confidence 3445666655543 34678888887775544445444578999999999999888875421 3589999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+.++.++ +++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++++++|++++|+
T Consensus 108 ~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 174 (385)
T 1b5p_A 108 FQAILDP-------------GDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPN 174 (385)
T ss_dssp HHHHCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSC
T ss_pred HHHhcCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCC
Confidence 8887432 46899999999999999999999999999975 457899999999998889999999999
Q ss_pred CCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C-CCCcEEEEcCccCCC-CCCCeE
Q 017569 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLVKSINVSGHKYGL-VYAGVG 286 (369)
Q Consensus 213 ~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~Dsi~~~~hK~l~-~p~g~g 286 (369)
||||.+.+ +++|+++|+++ ++++++|++|+.+... .. ...+. . ...+.+..+++|+++ .+.+.|
T Consensus 175 NPtG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~-~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 244 (385)
T 1b5p_A 175 NPTGAVYPKEVLEALARLAVEH------DFYLVSDEIYEHLLYE---GE-HFSPGRVAPEHTLTVNGAAKAFAMTGWRIG 244 (385)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBSS---SC-CCCGGGTCTTTEEEEEESTTTTTCGGGCCE
T ss_pred CCCCCCcCHHHHHHHHHHHHHc------CCEEEEEccchhcccC---CC-CCCHHHcCCCCEEEEEechhhcCCcccceE
Confidence 99999854 99999999999 9999999999875431 11 11111 1 134666778999985 345589
Q ss_pred EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh-----cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-----GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l-----g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+++.++ +.. ..+.....+. . .+- ..+.++++...+ +.+.++++ +..++.+++.+.|++.
T Consensus 245 ~~~~~~-~~~-~~l~~~~~~~-----~----~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 245 YACGPK-EVI-KAMASVSRQS-----T----TSP---DTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp EEECCH-HHH-HHHHHHHHTT-----T----CSC---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCH-HHH-HHHHHHHhhc-----c----CCC---CHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 998743 221 1211100000 0 011 133344443444 23345544 7777888899999876
Q ss_pred C
Q 017569 360 S 360 (369)
Q Consensus 360 g 360 (369)
|
T Consensus 311 g 311 (385)
T 1b5p_A 311 G 311 (385)
T ss_dssp T
T ss_pred C
Confidence 4
No 60
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.88 E-value=1.2e-21 Score=188.19 Aligned_cols=265 Identities=13% Similarity=0.072 Sum_probs=186.4
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+...+. ++++.+.+++.+.++.....|.. +..++++++++++++++|.+.+ ....++|+||++|+..++
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~---~~~v~~~~g~~~a~~~~~ 107 (391)
T 4dq6_A 33 DLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIK---SEWLIYSPGVIPAISLLI 107 (391)
T ss_dssp CSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCc---HHHeEEcCChHHHHHHHH
Confidence 33455554444 34588899999888765444433 4588999999999999995431 135899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc--C-CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--E-GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
.++..+ +++|+++.++|.++...++..|++++.+|++ + +++.+|+++|++++++ +++|++++|
T Consensus 108 ~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p 173 (391)
T 4dq6_A 108 NELTKA-------------NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNP 173 (391)
T ss_dssp HHHSCT-------------TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESS
T ss_pred HHhCCC-------------CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECC
Confidence 887432 4689999999999999999999999999987 2 3478999999999988 999999999
Q ss_pred CCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C----CCCcEEEEcCccCCC-CC
Q 017569 212 STLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----PLVKSINVSGHKYGL-VY 282 (369)
Q Consensus 212 ~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~~~Dsi~~~~hK~l~-~p 282 (369)
+||||.+ +++++|+++|+++ ++++|+|++|+.+... ......+. . .....+..+.+|+++ .+
T Consensus 174 ~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 244 (391)
T 4dq6_A 174 HNPVGRVWTKDELKKLGDICLKH------NVKIISDEIHSDIILK---KHKHIPMASISKEFEKNTITCMAPTKTFNIAG 244 (391)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGG
T ss_pred CCCCCcCcCHHHHHHHHHHHHHc------CCEEEeeccccccccC---CCCccCHHHcCccccCcEEEEEechhhccCcc
Confidence 9999999 7799999999999 9999999999875431 11111121 1 122366778999985 55
Q ss_pred CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
.+.|++++++++.. ..+........ .++.+.....++..++.. +.+.++++ +..++.+++.+.|++
T Consensus 245 ~r~G~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~ 312 (391)
T 4dq6_A 245 LQSSYVVLPDEKDY-KLLDDAFTRID--------IKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINE 312 (391)
T ss_dssp GCCEEEECCSHHHH-HHHHHHHHHTT--------CCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCHHHH-HHHHHHHHhhc--------CCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67898887653222 12111000000 012222223333344443 33445555 788899999999987
No 61
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=5.1e-22 Score=192.72 Aligned_cols=263 Identities=13% Similarity=-0.007 Sum_probs=187.6
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|....+. +.++.+.+++ +.++.....|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+..++.+
T Consensus 46 i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~t~a~~~~~~~ 121 (409)
T 2gb3_A 46 HHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP---ENVLVTNGGSEAILFSFAV 121 (409)
T ss_dssp EECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG---GGEEEESHHHHHHHHHHHH
T ss_pred EeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH---HHEEEeCCHHHHHHHHHHH
Confidence 445444443 2356788888 8886654455555678899999999999888865421 3589999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+..+ +++|+++.++|.++..+++..|++++.+|+++ +++.+ +++|++++++++++|+++.++||+
T Consensus 122 ~~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~npt 187 (409)
T 2gb3_A 122 IANP-------------GDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPT 187 (409)
T ss_dssp HCCT-------------TCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTT
T ss_pred hCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCC
Confidence 7431 46899999999999999999999999999875 34566 899999998889999999999999
Q ss_pred ccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCC-CCCeEEEEE
Q 017569 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV-YAGVGWVVW 290 (369)
Q Consensus 216 G~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~-p~g~g~l~~ 290 (369)
|.+. ++++|.++|+++ ++++|+|++|+.+... .+.... +. ....|.++.++||+++. +..+|++++
T Consensus 188 G~~~~~~~l~~i~~~~~~~------~~~li~Dea~~~~~~~--~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 258 (409)
T 2gb3_A 188 GVVYGKDEMRYLVEIAERH------GLFLIVDEVYSEIVFR--GEFASA-LSIESDKVVVIDSVSKKFSACGARVGCLIT 258 (409)
T ss_dssp CCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCS--SCCCCG-GGSCCTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCCcCHHHHHHHHHHHHHc------CCEEEEECcccccccC--CCCCCc-cccCCCCEEEEecchhccCCccceEEEEEE
Confidence 9984 589999999999 9999999999875531 111111 22 34678999999999853 345899987
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
++++.. ..+....... + +.+ .+.++++...+ +.++++++ +..++.+++.+.|++.|+
T Consensus 259 ~~~~l~-~~l~~~~~~~-------~---~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 319 (409)
T 2gb3_A 259 RNEELI-SHAMKLAQGR-------L---APP---LLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGL 319 (409)
T ss_dssp SCHHHH-HHHHHHHHHS-------C---CCC---HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcHHHH-HHHHHHHhcc-------C---CCC---HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 542222 2211100000 0 111 23333333444 55667766 788899999999988753
No 62
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.88 E-value=3.7e-21 Score=186.74 Aligned_cols=273 Identities=11% Similarity=-0.000 Sum_probs=185.8
Q ss_pred cCCCCccccccccCC-ChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHH
Q 017569 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 53 ~~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (369)
+++..++|+.+.+.. +++.+.+++.++++.. ...|....+..++++++.+++.+.+|.+.+. ...+++|+||++|+
T Consensus 35 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~--~~~v~~t~g~~~a~ 112 (412)
T 2x5d_A 35 RGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP--ESEAIVTIGSKEGL 112 (412)
T ss_dssp TTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT--TTSEEEESCHHHHH
T ss_pred cCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CcCEEEcCChHHHH
Confidence 444445666655542 4577888888887653 3344445678899999999998888975311 02489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEe
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
.+++.++..+ +++|+++.++|..+...++..|++++.+|++++ ++.+|+++|++++++++++|+++
T Consensus 113 ~~~~~~~~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~ 179 (412)
T 2x5d_A 113 AHLMLATLDH-------------GDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILG 179 (412)
T ss_dssp HHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEE
T ss_pred HHHHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEEC
Confidence 9998886431 468999999999999999999999999999764 46789999999998889999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g 284 (369)
.|+||||.+.+ +++|+++|+++ ++++|+|++|+.+...--.+..-..+. ..+.+.++.+++|+++ .+.+
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (412)
T 2x5d_A 180 FPSNPTAQCVELDFFERVVALAKQY------DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWR 253 (412)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSC
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccc
Confidence 99999999855 78899999999 999999999987653100000001111 1356788899999986 4456
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+|++++++ +.. ..+.....+.. ++-+ .+.++++...+ +.+.++++ +..++.+++.+.|++.|
T Consensus 254 ~G~~~~~~-~~~-~~l~~~~~~~~---------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 319 (412)
T 2x5d_A 254 IGFMVGNP-ELV-SALARIKSYHD---------YGTF---TPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG 319 (412)
T ss_dssp CEEEEECH-HHH-HHHHHHHHHHC---------CCCC---HHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCH-HHH-HHHHHHHhhhc---------cCCC---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 89998743 222 22211000000 1112 22333333333 33456665 78889999999998764
No 63
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.88 E-value=2.5e-21 Score=189.15 Aligned_cols=273 Identities=14% Similarity=0.058 Sum_probs=187.8
Q ss_pred CCccccccccC-----CChHHHHHHHHHHhccCC-CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 56 PRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 56 p~~~l~~~~~~-----~~~~~v~~~~~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
+.++|+.+.+. ++++.+.+++.+.+.... ..|....+..++++++.+++.+. |.+.+ ...+++|+||++|
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~---~~~v~~t~g~t~a 130 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLE---AKDVILTSGCSQA 130 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCC---GGGEEEESSHHHH
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCC---hHHEEEecCcHHH
Confidence 33677777654 456888998888876542 34445567778887754444332 22221 1358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEE
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
+.+++.++.++ +++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++++++|++
T Consensus 131 l~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i 197 (427)
T 3dyd_A 131 IDLCLAVLANP-------------GQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIV 197 (427)
T ss_dssp HHHHHHHHCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEE
T ss_pred HHHHHHHhcCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEE
Confidence 99998887542 46899999999999999999999999999864 45789999999999988999999
Q ss_pred eeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEE-EEcCccC-CCC
Q 017569 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSI-NVSGHKY-GLV 281 (369)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi-~~~~hK~-l~~ 281 (369)
+.|+||||.+.+ +++|+++|+++ ++++++|++|+++... ......+. ....+.+ +.+++|. +..
T Consensus 198 ~~p~nptG~~~~~~~l~~i~~~~~~~------~~~~i~Deay~~~~~~---g~~~~~~~~~~~~~~vi~~~S~sK~~~~~ 268 (427)
T 3dyd_A 198 NNPSNPCGSVFSKRHLQKILAVAARQ------CVPILADEIYGDMVFS---DCKYEPLATLSTDVPILSCGGLAKRWLVP 268 (427)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTTTCBCS---SCCCCCGGGGCSSCCEEEEEESTTTSSCG
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcCchhhccC---CCcCccHHHhCCCCcEEEEeeccccCCCc
Confidence 999999999988 99999999999 9999999999976531 11111111 1122334 4589997 555
Q ss_pred CCCeEEEEEeCCCCcc-cccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 282 YAGVGWVVWRTKDDLP-DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 282 p~g~g~l~~~~~~~~~-~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
+.+.|+++++++.... ..+........ .. ..+.+.....++..+|.....+.+.++ +..++.+++.+.|++
T Consensus 269 G~riG~~~~~~~~~~~~~~i~~~l~~~~----~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (427)
T 3dyd_A 269 GWRLGWILIHDRRDIFGNEIRDGLVKLS----QR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA 342 (427)
T ss_dssp GGCCEEEEEECSTTSSHHHHHHHHHHHH----HH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEecCcchhhHHHHHHHHHHHH----hc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5778999988642110 11100000000 00 012223334444555555556667766 788899999999998
Q ss_pred cC
Q 017569 359 SS 360 (369)
Q Consensus 359 ~g 360 (369)
.+
T Consensus 343 ~~ 344 (427)
T 3dyd_A 343 IP 344 (427)
T ss_dssp ST
T ss_pred CC
Confidence 74
No 64
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.88 E-value=2.4e-23 Score=200.64 Aligned_cols=262 Identities=11% Similarity=-0.050 Sum_probs=176.2
Q ss_pred cccccCCChHHHHHHHHHHhcc---CCCC----CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHH
Q 017569 61 ASFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIML 132 (369)
Q Consensus 61 ~~~~~~~~~~~v~~~~~~~~~~---n~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~ 132 (369)
.+-.|++.++.|.+++...+.. |+.. ...++...++.+++++.+++++|++.+ ..+++ |+|||+++.+
T Consensus 31 ~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~----~evif~t~~~T~a~n~ 106 (386)
T 3qm2_A 31 FSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSN----YKVLFCHGGGRGQFAG 106 (386)
T ss_dssp CCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTT----EEEEEEESCTTHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHH
Confidence 4445667778888888766533 2111 011334456667889999999999641 24777 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEecc--CCccccCHHHHHHHHhhcCcEEEE
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAA 208 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~~~~v~~ 208 (369)
++..+..+ ++++++...+|++ +...++..| .++.++++ +++..+++++++++++++|++|.+
T Consensus 107 ai~~l~~~-------------gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~ 172 (386)
T 3qm2_A 107 VPLNLLGD-------------KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHY 172 (386)
T ss_dssp HHHHHCTT-------------CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEE
T ss_pred HHHhccCC-------------CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEE
Confidence 98876431 3455443333333 344456678 89999988 442248888898899999999999
Q ss_pred eeCCCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEE
Q 017569 209 ILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (369)
Q Consensus 209 ~~~~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~ 287 (369)
++.+|.+|.+ .|+++|+ + ++++|||++++.+.. +++++. .|.+++++|||+ +|.|.|+
T Consensus 173 ~h~et~tG~~i~pi~~i~-----~------g~~~~vDa~qs~g~~-------pidv~~--~~~~~~s~hK~l-GP~G~g~ 231 (386)
T 3qm2_A 173 CPNETIDGIAIDETPDFG-----P------EVVVTADFSSTILSA-------PLDVSR--YGVIYAGAQKNI-GPAGLTL 231 (386)
T ss_dssp CSEETTTTEECCCCCCCC-----T------TCCEEEECTTTTTSS-------CCCGGG--CSEEEEETTTTT-CCTTEEE
T ss_pred ECCcCCcCEecCchhhhc-----C------CCEEEEEcccccCCC-------CCCccc--cCEEEEeccccc-CCCccEE
Confidence 9999999995 9999986 7 999999999987665 344442 345678899999 6999999
Q ss_pred EEEeCCCCcccccccccCccC--CCCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 288 VVWRTKDDLPDELVFHINYLG--SDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 288 l~~~~~~~~~~~~~~~~~y~~--~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+++|++... ......+.++. .........+|.+...++++..+++.+..+ |++++ +..+++++++++|+++|++
T Consensus 232 l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~ 310 (386)
T 3qm2_A 232 VIVREDLLG-KAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFY 310 (386)
T ss_dssp EEEEGGGCS-CCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred EEECHHHHh-hhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999875321 11001111211 000111223688888889999999999888 89988 9999999999999998863
No 65
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.88 E-value=1.4e-21 Score=187.54 Aligned_cols=261 Identities=13% Similarity=0.009 Sum_probs=182.4
Q ss_pred cccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
+|....+. ++++.+.+++.++++. ...|....+..++++. +++++|.++ ..+++|+||++|+..++.++
T Consensus 29 ~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~-----~~v~~~~g~~~a~~~~~~~~ 98 (381)
T 1v2d_A 29 NLGQGFPSNPPPPFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEP-----ESVVVTSGATEALYVLLQSL 98 (381)
T ss_dssp ECCCCSCSSCCCHHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCG-----GGEEEESSHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCCh-----hhEEEcCChHHHHHHHHHHh
Confidence 44444333 3457788888888865 3334434456666665 667788875 24899999999999998887
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc--CCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
..+ +++|+++.++|.++...++..|++++.+|++ ++++.+|+++|++++++++++|++++++|||
T Consensus 99 ~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 165 (381)
T 1v2d_A 99 VGP-------------GDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPT 165 (381)
T ss_dssp CCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred CCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCC
Confidence 431 4689999999999999999999999999987 4458999999999998889999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
|.+.| +++|+++|+++ ++++|+|++|+++... -.+.....+ ..+.|.++.++||+++ .+.++|+++++
T Consensus 166 G~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~g-~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~ 237 (381)
T 1v2d_A 166 GLVFGERELEAIARLARAH------DLFLISDEVYDELYYG-ERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGP 237 (381)
T ss_dssp CCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBSS-SCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECC
T ss_pred CCccCHHHHHHHHHHHHHc------CCEEEEEcCccccccC-CCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeC
Confidence 99855 89999999999 9999999999875431 000001111 3478999999999975 23458999874
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc-HhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+ +.. +.+.....+. . ++.+.....++..+|+... .++++++ +..++++++.+.|++.|+
T Consensus 238 ~-~~~-~~~~~~~~~~-----~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 299 (381)
T 1v2d_A 238 K-EFM-PRLAGMRQWT-----S----FSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL 299 (381)
T ss_dssp T-TTH-HHHHHHHHHH-----T----SSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred H-HHH-HHHHHHHhhc-----c----cCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3 332 2221111110 0 1222222233334444332 4456666 888999999999998653
No 66
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.88 E-value=4.6e-21 Score=183.25 Aligned_cols=262 Identities=13% Similarity=0.087 Sum_probs=186.7
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
++..++|....+.. +++.+.+++.+.++.....|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+..
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~~~a~~~ 104 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP---DNIIITGGSSLGLFF 104 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG---GGEEEESSHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEECCChHHHHHH
Confidence 44445555555543 35778888888876544445445578899999999999888865422 358999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
++.++..+ +++|++++++|.++...++..|++++.+| +|+++|++++++++++|+++.|+
T Consensus 105 ~~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-------~d~~~l~~~l~~~~~~v~~~~p~ 164 (370)
T 2z61_A 105 ALSSIIDD-------------GDEVLIQNPCYPCYKNFIRFLGAKPVFCD-------FTVESLEEALSDKTKAIIINSPS 164 (370)
T ss_dssp HHHHHCCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEEC-------SSHHHHHHHCCSSEEEEEEESSC
T ss_pred HHHHhcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEeC-------CCHHHHHHhcccCceEEEEcCCC
Confidence 98887432 46899999999999999999999988887 68999999998888999999999
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEE
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~ 290 (369)
||+|.+.|++ |.++|+++ ++++++|++|+.+...- .+.....+. ..+.|.+..++||+++ .+.+.|+++.
T Consensus 165 nptG~~~~~~-l~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 236 (370)
T 2z61_A 165 NPLGEVIDRE-IYEFAYEN------IPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS 236 (370)
T ss_dssp TTTCCCCCHH-HHHHHHHH------CSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCcCcccCHH-HHHHHHHc------CCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEE
Confidence 9999999999 99999999 99999999999755310 010011221 2467889999999985 3344899887
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh---cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL---GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l---g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++ +.. +.+....... . ++. ..+.++++...+ +.+.++++ +..++.+++.+.|++.|
T Consensus 237 ~~-~~~-~~~~~~~~~~-----~----~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 297 (370)
T 2z61_A 237 ND-EII-EAILKLQQNL-----F----ISA---PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG 297 (370)
T ss_dssp CH-HHH-HHHHHHHHHH-----T----SSS---CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CH-HHH-HHHHHHHhhc-----c----cCC---CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 54 222 2221100000 0 111 133344444444 34555655 78889999999998865
No 67
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.88 E-value=2.3e-21 Score=183.80 Aligned_cols=251 Identities=10% Similarity=-0.038 Sum_probs=176.3
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
++++++.+.+++.+.++. |....+..++++++++++++++|.++ ..+++|+||++|+..++.+++++
T Consensus 23 ~~~~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~---- 89 (359)
T 1svv_A 23 SVGMHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPD-----ADVHFISGGTQTNLIACSLALRP---- 89 (359)
T ss_dssp SSCCCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTT-----SEEEEESCHHHHHHHHHHHHCCT----
T ss_pred cCCCCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCC-----ccEEEeCCchHHHHHHHHHHhCC----
Confidence 335568888998888753 22334557788899999999999765 34899999999999999887542
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHH--HHhhhcceeEEEeccCCccccCHHHHHHHHhhc-------CcEEEEeeCCCCc
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEK--FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN-------TICVAAILGSTLT 215 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~--~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~-------~~~v~~~~~~~~t 215 (369)
+++|+++.++|.++.. .++..|++++.+|.+ ++.+|+++|+++++++ +++|+++.+ |||
T Consensus 90 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~pt 157 (359)
T 1svv_A 90 ---------WEAVIATQLGHISTHETGAIEATGHKVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEV 157 (359)
T ss_dssp ---------TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTT
T ss_pred ---------CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCC
Confidence 4689999999999888 478889999999986 4899999999999876 789999988 689
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC-CCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
|.+.| +++|.++|+++ ++++|+|++|.++..... +.....+.+ ..+|++++++||++ +|.++|+++++
T Consensus 158 G~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~l~~~ 229 (359)
T 1svv_A 158 GTQYTKQELEDISASCKEH------GLYLFLDGARLASALSSP-VNDLTLADIARLTDMFYIGATKAG-GMFGEALIILN 229 (359)
T ss_dssp SCCCCHHHHHHHHHHHHHH------TCEEEEECTTHHHHHTST-TCCCCHHHHHHHCSEEEEECTTTT-CSSCEEEEECS
T ss_pred ceecCHHHHHHHHHHHHHh------CCEEEEEccchhhhhcCC-CcchhhhhhhhcCCEEEEecccCC-CCCceEEEEEc
Confidence 99987 99999999999 999999999955432111 110001000 25799999999985 68888988875
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+ +.. +.+.... ...+. .+ +.... ....+ ...+..+++.++ +..++++++.+.|+..|
T Consensus 230 ~-~~~-~~~~~~~-~~~~~--~~----~~~~~-~~~~~--~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (359)
T 1svv_A 230 D-ALK-PNARHLI-KQRGA--LM----AKGWL-LGIQF--EVLMKDNLFFELGAHSNKMAAILKAGLEACG 288 (359)
T ss_dssp G-GGC-TTHHHHH-HHTTC--CC----TTTHH-HHHHH--HHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred c-cHH-HHHHHHH-hcCCc--cc----ccchh-hHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 3 222 2221100 00110 00 00111 11111 234555666666 88999999999994333
No 68
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.88 E-value=8.5e-22 Score=190.38 Aligned_cols=267 Identities=11% Similarity=-0.023 Sum_probs=189.4
Q ss_pred ccccccccC--CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 58 LNLASFVTT--WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 58 ~~l~~~~~~--~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
++|+.+.+. ++++.+.+++.+++... ...|....+..++++++.+++++++|.+.+. ....++|+||++|+..++
T Consensus 42 id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~--~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 42 VDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDA--RDGLIITPGTQGALFLAV 119 (407)
T ss_dssp EETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCT--TTSEEEESHHHHHHHHHH
T ss_pred eeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCcHHHHHHHH
Confidence 456554443 45577888888777643 2234455678899999999999999986421 135899999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-----CCccccCHHHHHHHHhhcCcEEEEe
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-----EGYYVMNPVKAVELVDENTICVAAI 209 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-----~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (369)
.++..+ +++|+++.++|.++...++..|++++.+|++ ++++.+|+++|++++++++++|+++
T Consensus 120 ~~l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 186 (407)
T 3nra_A 120 AATVAR-------------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFS 186 (407)
T ss_dssp HTTCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEE
T ss_pred HHhCCC-------------CCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEc
Confidence 876432 4689999999999999999999999999983 2458999999999999999999999
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-----CCCCcEEEEcCccCCC-
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-----LPLVKSINVSGHKYGL- 280 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-----~~~~Dsi~~~~hK~l~- 280 (369)
.|+||||.+.| +++|+++|+++ ++++|+|++|+.+... ......+. ....+.+..+++|+++
T Consensus 187 ~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~Dea~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 257 (407)
T 3nra_A 187 NPNNPAGVVYSAEEIGQIAALAARY------GATVIADQLYSRLRYA---GASYTHLRAEAAVDAENVVTIMGPSKTESL 257 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBCT---TCCCCCGGGCTTSCGGGEEEEECSSSTTCC
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCCChhhcCcccCCcEEEEeCcccccCC
Confidence 99999999987 99999999999 9999999999875541 11111111 1345677888999986
Q ss_pred CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--HhhHHHH--HhhHHHHHHHHHH
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEVIPSF--CCVDHKKLSSFFV 356 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--~~G~~~~--~~~~~a~~l~~~L 356 (369)
.+.+.|+++.++ +.. ..+........ .+. ..+.++++...+. .+.++++ +..++.+++++.|
T Consensus 258 ~G~r~G~~~~~~-~~~-~~l~~~~~~~~---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 323 (407)
T 3nra_A 258 SGYRLGVAFGSR-AII-ARMEKLQAIVS---------LRA---AGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVL 323 (407)
T ss_dssp GGGCCEEEEECH-HHH-HHHHHHHHHHT---------SSS---CHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEEEcCH-HHH-HHHHHHHhhhc---------cCC---ChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 456789887642 222 12111000000 111 1233444444442 2445555 7888999999999
Q ss_pred HhcCCC
Q 017569 357 IHSSYF 362 (369)
Q Consensus 357 ~~~g~~ 362 (369)
++.+.+
T Consensus 324 ~~~~~~ 329 (407)
T 3nra_A 324 RGCEGV 329 (407)
T ss_dssp HTSTTC
T ss_pred hcCCCc
Confidence 987433
No 69
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=2.3e-21 Score=186.49 Aligned_cols=236 Identities=8% Similarity=-0.026 Sum_probs=174.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH-
Q 017569 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE- 168 (369)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~- 168 (369)
++...++.+++++++++++|.+. ..++|+|||+|+..++..+ . .+++|+++.+.|++..
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~sgt~a~~~~~~~~-~-------------~gd~vi~~~~~~~~~~~ 89 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAEA------AVIIPGSGTYGMEAVARQL-T-------------IDEDCLIIRNGWFSYRW 89 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSE------EEEEESCHHHHHHHHHHHH-C-------------TTCEEEEEECSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCC------EEEEcCChhHHHHHHHHhC-C-------------CCCeEEEEeCCchhHHH
Confidence 45667888899999999999872 3788899999998876433 1 1468999988887643
Q ss_pred -HHHhhhcc--eeEEEeccCC-------c-cccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhh
Q 017569 169 -KFARYFEV--ELKEVKLEEG-------Y-YVMNPVKAVELVD-ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (369)
Q Consensus 169 -~~~~~~G~--~v~~v~~~~~-------~-~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~ 233 (369)
..++..|+ +++.++++.+ . ..+|+++|+++++ +++++|++++++|++|.+.| +++|+++|+++
T Consensus 90 ~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-- 167 (379)
T 3ke3_A 90 TQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-- 167 (379)
T ss_dssp HHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT--
T ss_pred HHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc--
Confidence 44555664 6777876431 1 2689999999996 48999999999999999999 99999999999
Q ss_pred ccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc--ccCccCC--
Q 017569 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF--HINYLGS-- 309 (369)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~--~~~y~~~-- 309 (369)
++++|+|++++ +..+ +++...++|.++.++|||+++|.|.|+++++++ .. +.+.. ...|...
T Consensus 168 ----~~~li~D~~~~-g~~~-------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~-~~l~~~~~~~~~~~~~ 233 (379)
T 3ke3_A 168 ----GGLLVIDCIAS-GCVW-------LDMKELGIDVLISAPQKGWSSTPCAGLVMLSAA-AI-KKVESTESNCFSLDLK 233 (379)
T ss_dssp ----TCEEEEECTTC-TTCC-------CCHHHHTCSEEEECTTTTTCSCCCEEEEEECHH-HH-HHHHTCCCSCSTTCHH
T ss_pred ----CCEEEEEeccc-CCcc-------ccccccCCCEEEecchhhcCCCCceEEEEECHH-HH-HhhhcCCCCceeecHH
Confidence 99999999987 4331 233223789999999999999999999998653 11 11110 0111100
Q ss_pred ---------CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 310 ---------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 310 ---------~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
........+|.+....+++.+++..+..+|++++ +..++++++++.|+++|+
T Consensus 234 ~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~ 296 (379)
T 3ke3_A 234 QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGI 296 (379)
T ss_dssp HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0000011246666667778888998888888888 899999999999999875
No 70
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.88 E-value=1.9e-21 Score=189.43 Aligned_cols=270 Identities=12% Similarity=0.019 Sum_probs=189.2
Q ss_pred CCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+...+. +.++.+.+++.+.++.....|... ..++++++++++++.+|.+.+ ...+++|+|+++|+..++
T Consensus 62 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~---~~~v~~~~g~~ea~~~a~ 136 (421)
T 3l8a_A 62 ELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVV---KEDILFIDGVVPAISIAL 136 (421)
T ss_dssp TCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHH
T ss_pred CeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCC---HHHEEEcCCHHHHHHHHH
Confidence 33455444443 345788898888886544444333 378999999999999995532 245899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc--CCccccCHHHHHHHHh-hcCcEEEEeeC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVD-ENTICVAAILG 211 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~-~~~~~v~~~~~ 211 (369)
.++..+ +++|+++.++|..+..++...|.+++.+|++ +.++.+|+++|+++++ +++++|+++.+
T Consensus 137 ~~~~~~-------------gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p 203 (421)
T 3l8a_A 137 QAFSEK-------------GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSP 203 (421)
T ss_dssp HHHSCT-------------EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESS
T ss_pred HHhcCC-------------CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCC
Confidence 887432 3689999999999999999999999999985 3457899999999998 68999999999
Q ss_pred CCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc--CCCCcEEEEcCccCCC-CCCCe
Q 017569 212 STLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGL-VYAGV 285 (369)
Q Consensus 212 ~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Dsi~~~~hK~l~-~p~g~ 285 (369)
+||+|.+ +++++|+++|+++ ++++|+|++|+++...--....-..+. ....+.+..+++|+++ .+.+.
T Consensus 204 ~nptG~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~ 277 (421)
T 3l8a_A 204 HNPGGRVWDNDDLIKIAELCKKH------GVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKN 277 (421)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhhe
Confidence 9999998 7899999999999 999999999987553100000001111 1244577788999985 55678
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|++++++++.. ..+........ + ++.+.....++.++++. +.+.++++ +..++.+++++.|++.
T Consensus 278 G~~~~~~~~l~-~~~~~~~~~~~-----~---~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (421)
T 3l8a_A 278 SFAIIQNESLR-RKFQYRQLANN-----Q---HEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAK 343 (421)
T ss_dssp EEEECCSHHHH-HHHHHHHHHTT-----C---SCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeEEcCCHHHH-HHHHHHHHhcc-----c---CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99988654332 22211100000 0 12222223444444443 44556666 7888999999999876
No 71
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1.8e-21 Score=192.92 Aligned_cols=281 Identities=12% Similarity=0.052 Sum_probs=171.5
Q ss_pred HHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhccCC--CCCC-----CCcchHHHHHHHHHHHHHHhCCCCCC
Q 017569 42 AYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--VDMD-----EYPVTTELQNRCVNMIAHLFNTPVAD 114 (369)
Q Consensus 42 i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~n~--~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~ 114 (369)
+.+.+.++..... ..++|.. .+++.++.|.+++.+.+.+.. +++. ..+...++|+.+++++++++|++.++
T Consensus 42 ~~~~~~~e~~rq~-~~i~lia-s~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~ 119 (490)
T 2a7v_A 42 MWELLQREKDRQC-RGLELIA-SENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ 119 (490)
T ss_dssp HHHHHHHHHHHHH-HSEECCT-TCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTT
T ss_pred HHHHHHHHHHHHH-cCceEEC-CCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCccc
Confidence 5555554443222 1223322 344567889999888774432 2221 11234589989999999999998621
Q ss_pred CCCC-CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH--------HHHhhhcceeEE--Eec
Q 017569 115 DKTA-VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE--------KFARYFEVELKE--VKL 183 (369)
Q Consensus 115 ~~~~-~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~--------~~~~~~G~~v~~--v~~ 183 (369)
. ..+++++|++||..++.++.++ +++|+++.+.|.++. ..+...|..++. +++
T Consensus 120 ---~~~~v~~~sGt~An~~al~al~~p-------------GD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v 183 (490)
T 2a7v_A 120 ---WGVNVQPYSGSPANLAVYTALLQP-------------HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL 183 (490)
T ss_dssp ---EEEECCCSSHHHHHHHHHHHHCCS-------------CEECCC-------------------------------CCB
T ss_pred ---CceEEeCCchHHHHHHHHHHHcCC-------------CCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc
Confidence 1 1355668999999999887542 478999888775421 123455655444 445
Q ss_pred cCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc
Q 017569 184 EEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (369)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (369)
+++++.+|+++|++++.+ +|++|+++.++++ ...|+++|+++|+++ ++++|+|+|++.+.. .....+..
T Consensus 184 d~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~------g~~livD~Ah~~glv--~~g~~~~~ 253 (490)
T 2a7v_A 184 NPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEV------KAHLLADMAHISGLV--AAKVIPSP 253 (490)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHT------TCEEEEECGGGHHHH--HTTSSCCG
T ss_pred ccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHc------CCEEEEccccccccc--cCCcCCCC
Confidence 555689999999999974 7888877666554 567999999999999 999999999865433 11111122
Q ss_pred ccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC-------------CcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD-------------DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 263 ~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~-------------~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
+ .++|+++.++||++.+|.| |++++++.- .+...+ +. .. .+.++++.....++++.
T Consensus 254 ~--~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i--~~-~~-----~~g~qggp~~~~iaAla 322 (490)
T 2a7v_A 254 F--KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRI--NF-AV-----FPSLQGGPHNHAIAAVA 322 (490)
T ss_dssp G--GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHH--HH-HH-----TTTTCCSCCHHHHHHHH
T ss_pred C--CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHH--HH-Hh-----cccCCCCchHHHHHHHH
Confidence 2 3789999999999988876 888887631 010110 00 00 11123455555566666
Q ss_pred HHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 330 YQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 330 ~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
++++....+++.++ +..+++++|++.|++.|+
T Consensus 323 ~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~ 356 (490)
T 2a7v_A 323 VALKQACTPMFREYSLQVLKNARAMADALLERGY 356 (490)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 67776654555655 899999999999999875
No 72
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.87 E-value=5.5e-22 Score=189.95 Aligned_cols=248 Identities=14% Similarity=0.050 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHh
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (369)
++.+.+++.+.+..+. +...+...++|++ +++++|.+. +++++||++|+..++.++ ..
T Consensus 16 ~~~~~~a~~~~~~~~~--~~~~~~~~~l~~~----la~~~~~~~-------~i~~~sgt~al~~~l~~l~~~-------- 74 (373)
T 3frk_A 16 EYEIKFKFEEIYKRNW--FILGDEDKKFEQE----FADYCNVNY-------CIGCGNGLDALHLILKGYDIG-------- 74 (373)
T ss_dssp HHHHHHHHHHHHHHTC--CSSSHHHHHHHHH----HHHHHTSSE-------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred CHHHHHHHHHHHHCCC--ccCCchHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC--------
Confidence 3567777777776543 2344555556555 888888864 899999999999988876 22
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l 227 (369)
.+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++
T Consensus 75 -----~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l 146 (373)
T 3frk_A 75 -----FGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRI 146 (373)
T ss_dssp -----TTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHH
T ss_pred -----CcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHH
Confidence 1469999999999999999999999999999865699999999999998888777 67899999999999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc--CccCCCCCCCeEEEEEeCCCCcccccccccC
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKDDLPDELVFHIN 305 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 305 (369)
|+++ ++++|+|++|+.+.. .... ... ...|.++++ .||+++++...|+++.++.+.. ..+..-..
T Consensus 147 ~~~~------~~~li~D~a~~~g~~--~~~~---~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~-~~~~~~~~ 213 (373)
T 3frk_A 147 AKKY------NLKLIEDAAQAHGSL--YKGM---KVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLA-EKIKALSN 213 (373)
T ss_dssp HHHH------TCEEEEECTTCTTCE--ETTE---ETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHH-HHHHHHHB
T ss_pred HHHc------CCEEEEECCcccCCE--ECCE---ecc-ccccEEEEeCcCCCccCccceeEEEEeCCHHHH-HHHHHHHh
Confidence 9999 999999999986543 1111 111 125777777 7799966344577766543222 11110000
Q ss_pred ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 306 YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 306 y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+...........|.......+ .+++.....++++++ +..++++++++.|++.+
T Consensus 214 ~g~~~~~~~~~~g~~~~~~~~--~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (373)
T 3frk_A 214 YGSEKKYHHIYKGFNSRLDEL--QAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN 268 (373)
T ss_dssp TTCSBTTBCCSCCCBCCCCHH--HHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred cCcccCCccccccccCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 000000000001111111122 223333334455656 88899999999998876
No 73
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=3.3e-21 Score=185.50 Aligned_cols=251 Identities=11% Similarity=0.011 Sum_probs=171.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHH-HHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI-AHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~l-a~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~ 144 (369)
+++.+.+++.++++.+...+ ..+...++|++ + ++++| .+ ..++++|||+|+.+++.++ ..
T Consensus 14 ~~~~i~~a~~~~~~~~~~~~-~~~~~~~l~~~----~~a~~~g~~~-------~~v~~~sgt~al~~al~~l~~~----- 76 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHIYTN-YGPINQRFEQT----IMSGFFQNRG-------AVTTVANATLGLMAAIQLKKRK----- 76 (377)
T ss_dssp CGGGGHHHHHHHHHHTCCSS-SCHHHHHHHHH----HHHHTSTTCS-------EEEEESCHHHHHHHHHHHHSCT-----
T ss_pred CcHHHHHHHHHHHHcCCccc-CCHHHHHHHHH----HHHHHhCCCC-------eEEEeCCHHHHHHHHHHHcCCC-----
Confidence 34667888888887655331 24566667666 7 88888 33 2799999999999988876 33
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH-hhc--CcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DEN--TICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i-~~~--~~~v~~~~~~~~tG~~~~l 221 (369)
.+++|+++.++|.++..++...|++++++|++++++.+|+++|++++ +++ |++|+ +++++|.+.|+
T Consensus 77 --------~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~ 145 (377)
T 3ju7_A 77 --------KGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNL 145 (377)
T ss_dssp --------TCCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCC
T ss_pred --------CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCH
Confidence 14799999999999999999999999999998656999999999998 666 88776 67889999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 301 (369)
++|.++|+ + ++++|+|++|+.+.. .... ...-....++.+++++||++++ ...|+++.++++... .+.
T Consensus 146 ~~i~~la~-~------~~~vi~D~a~a~g~~--~~~~-~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~-~~~ 213 (377)
T 3ju7_A 146 EEYEELEK-K------GVPVVVDAAPGFGLM--NGGM-HYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQ-RIK 213 (377)
T ss_dssp HHHHHHHH-T------TCCBEEECTTCTTCE--ETTE-ETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHH-HHH
T ss_pred HHHHHHHh-c------CCEEEEECCCccCCe--ECCE-eccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHH-HHH
Confidence 99999999 9 999999999976543 1110 1100112456677778999976 455777766543321 111
Q ss_pred cccCccCCC-CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 302 FHINYLGSD-QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 302 ~~~~y~~~~-~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.-..+ +.. .......|.+.....+.++..+..+ +.+..+ +..++++++.+.|++.+.
T Consensus 214 ~~~~~-g~~~~~~~~~~g~~~~~~~~~aa~~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~ 273 (377)
T 3ju7_A 214 RMGNF-GFDTNRECTMMGFNCKMSEYAAAIGIATM--KKWDDKLKERTRISEWYKQLLQSNGL 273 (377)
T ss_dssp HHTBT-TBCTTSCBCSSCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhc-CCCCCCceeeccccCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 10000 100 0001111222223344444444444 344555 888999999999998874
No 74
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.87 E-value=1.8e-21 Score=187.84 Aligned_cols=257 Identities=11% Similarity=-0.011 Sum_probs=179.1
Q ss_pred cccccccc-CC-ChHHHHHHHHHHhccCCCCC---CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 58 LNLASFVT-TW-MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 58 ~~l~~~~~-~~-~~~~v~~~~~~~~~~n~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
++|..+.+ +. +++.+.+++.++++.....+ ....+..++.+++++++++++|.+. +++|+||++|+..
T Consensus 46 idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 46 LMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEA-------AILFSTGFQSNLG 118 (398)
T ss_dssp EECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHH
T ss_pred EEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHH
Confidence 34444443 32 45778888877775432222 2233566788899999999999753 8999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEE
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAA 208 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~ 208 (369)
++.++..+ ++.|+++.++|.++..+++..|++++.+|+ +|+++|++++++ ++++|++
T Consensus 119 ~~~~~~~~-------------gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~~ 179 (398)
T 3a2b_A 119 PLSCLMGR-------------NDYILLDERDHASIIDGSRLSFSKVIKYGH------NNMEDLRAKLSRLPEDSAKLICT 179 (398)
T ss_dssp HHHHSSCT-------------TCEEEEETTCCHHHHHHHHHSSSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEE
T ss_pred HHHHHhCC-------------CCEEEECCccCHHHHHHHHHcCCceEEeCC------CCHHHHHHHHHhhccCCceEEEE
Confidence 98887432 468999999999999999999999988875 478999999987 7899999
Q ss_pred eeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccC-CCCcEEEEcCccCCCCCCCeE
Q 017569 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRL-PLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~-~~~Dsi~~~~hK~l~~p~g~g 286 (369)
+.++||||.+.|+++|.++|+++ ++++|+|++|+.+..... +..... ... .++|.++.++||+++ |.| |
T Consensus 180 ~~~~nptG~~~~~~~l~~~~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G 250 (398)
T 3a2b_A 180 DGIFSMEGDIVNLPELTSIANEF------DAAVMVDDAHSLGVIGHK-GAGTASHFGLNDDVDLIMGTFSKSLA-SLG-G 250 (398)
T ss_dssp ESBCTTTCCBCCHHHHHHHHHHH------TCEEEEECTTTTTTSSGG-GCCHHHHHTCGGGCSEEEEESSSTTC-SSC-E
T ss_pred eCCCCCCCCccCHHHHHHHHHHc------CcEEEEECCCcccccCCC-CCchHhhcCCCcCCeEEEeccccccc-CCC-c
Confidence 99999999999999999999999 999999999986543100 000011 111 247999999999986 667 8
Q ss_pred EEEEeCCCCcccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 287 WVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+++.++ +.. +.+... ..+... ++.+....+.+..+|+.+. .+.++ +..++.+++.+.|++.|+
T Consensus 251 ~~~~~~-~~~-~~l~~~~~~~~~~--------~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~ 316 (398)
T 3a2b_A 251 FVAGDA-DVI-DFLKHNARSVMFS--------ASMTPASVASTLKALEIIQ--NEPEHIEKLWKNTDYAKAQLLDHGF 316 (398)
T ss_dssp EEEECH-HHH-HHHHHHCHHHHSS--------BCCCHHHHHHHHHHHHHHH--HCTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCH-HHH-HHHHHhcccceec--------CCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 888743 222 222111 112111 1222222233445555542 23333 788899999999988753
No 75
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.87 E-value=1e-20 Score=181.95 Aligned_cols=250 Identities=11% Similarity=0.042 Sum_probs=168.7
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHh
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (369)
.+.+.+++.++++.+...+...+...+++++ +++++|.+. .+++++|++|+.+++.++ ..
T Consensus 16 ~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~----la~~~~~~~-------~i~~~sGt~al~~~l~~l~~~-------- 76 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAH-------ALAVTNGTHALELALQVMGVG-------- 76 (388)
T ss_dssp CHHHHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSE-------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred CHHHHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC--------
Confidence 3778888888886643333344556666655 788888763 455556699999998876 22
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l 227 (369)
.+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++
T Consensus 77 -----~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l 148 (388)
T 1b9h_A 77 -----PGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKI 148 (388)
T ss_dssp -----TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHH
T ss_pred -----CcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHH
Confidence 1468999999999999999999999999999875689999999999988887766 89999999999999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCC--ccccccccc
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDD--LPDELVFHI 304 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~--~~~~~~~~~ 304 (369)
|+++ ++++|+|++|+.+..+ .. ..+. ...++.++++.||++.++ ..|+++.+++.. . ..+....
T Consensus 149 a~~~------~~~li~D~a~~~g~~~--~~---~~~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~-~~~~~~~ 215 (388)
T 1b9h_A 149 SADT------GVPLLQDAAHAHGARW--QG---KRVGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKY-ETAFLRH 215 (388)
T ss_dssp HHHH------TCCBCEECTTCTTCEE--TT---EEGGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHH-HHHHHHT
T ss_pred HHHc------CCEEEEecchhcCCcc--CC---eecccccceEEEEccCCCcccCC-CeEEEEECCHHHHHH-HHHHHHH
Confidence 9999 9999999999864431 11 1122 224788888899999765 568888765433 2 1211100
Q ss_pred CccCCC-CCCc--cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 305 NYLGSD-QPTF--TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 305 ~y~~~~-~~~~--~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.+.... ...+ ...|+......+.++..+..+ +.+.+. +..++++++.+.|++.+
T Consensus 216 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~ 274 (388)
T 1b9h_A 216 SCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL--ARLDEQIAVRDERWTLLSRLLGAID 274 (388)
T ss_dssp BTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTST
T ss_pred hCCCCccCccceeecccccCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCC
Confidence 100000 0000 011221111223333333322 234444 77788999999999873
No 76
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=1.9e-21 Score=185.79 Aligned_cols=252 Identities=10% Similarity=-0.006 Sum_probs=170.9
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.++.++.+.+++.+.++....+ ..+... ++++.+++++|.+. +++|+||++|+.+++.+++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~--~~~~~~----~l~~~la~~~~~~~-------v~~~~ggt~al~~~~~~~~~~---- 70 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLT--QGKRSL----LFEEALCEFLGVKH-------ALVFNSATSALLTLYRNFSEF---- 70 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCS--SSHHHH----HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHSSCC----
T ss_pred CCCCCHHHHHHHHHHHHcCccc--CChHHH----HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhccc----
Confidence 3455688889998888654332 233333 45556888888863 899999999999998887210
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
-..+++|+++.++|.++..++...|++++.+|++++ +.+|+++|++++++++++|+++++ +|.+.|+++|
T Consensus 71 ------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i 140 (375)
T 2fnu_A 71 ------SADRNEIITTPISFVATANMLLESGYTPVFAGIKND-GNIDELALEKLINERTKAIVSVDY---AGKSVEVESV 140 (375)
T ss_dssp ------CTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTT-SSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHH
T ss_pred ------CCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCC-CCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHH
Confidence 001468999999999999999999999999999875 589999999999888888777665 8999999999
Q ss_pred HHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeC-CCCccccccc
Q 017569 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRT-KDDLPDELVF 302 (369)
Q Consensus 225 ~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~-~~~~~~~~~~ 302 (369)
.++|+++ ++++|+|++|+.+..+ .. ..+. ...++..++++||++ +| |.|++++++ ++.. +.+..
T Consensus 141 ~~l~~~~------~~~li~D~a~~~~~~~--~~---~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~-~~~~~ 206 (375)
T 2fnu_A 141 QKLCKKH------SLSFLSDSSHALGSEY--QN---KKVGGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELH-EKMKL 206 (375)
T ss_dssp HHHHHHH------TCEEEEECTTCTTCEE--TT---EETTSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHH-HHHHH
T ss_pred HHHHHHc------CCEEEEECccccCCeE--CC---eeccccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHH-HHHHH
Confidence 9999999 9999999999865442 11 0121 223677788888998 55 788888853 3222 11111
Q ss_pred ccCccCCC---CCCc--cccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 303 HINYLGSD---QPTF--TLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 303 ~~~y~~~~---~~~~--~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
... .+.. ...+ ...+.+.....+...+++. ..++++++ +..++++++.+.|++.+
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~ 268 (375)
T 2fnu_A 207 FRS-HGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS--QLKKAPFLMQKREEAALTYDRIFKDNP 268 (375)
T ss_dssp HTB-TTEEESSSSCEEESSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHh-cCCccccccccccccccccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 000 0000 0000 0011111122333333332 23566666 88899999999999863
No 77
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.87 E-value=8.5e-21 Score=180.03 Aligned_cols=254 Identities=13% Similarity=0.002 Sum_probs=179.2
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|....+. ++++.+.+++.+.+... ..| ..++ ..++++++++++|+++ ...++|+||++|+..++.+
T Consensus 19 i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~y-~~~~----~~~l~~~la~~~~~~~-----~~i~~~~g~~~a~~~~~~~ 87 (354)
T 3ly1_A 19 IRINFNENPLGMSPKAQAAARDAVVKA-NRY-AKNE----ILMLGNKLAAHHQVEA-----PSILLTAGSSEGIRAAIEA 87 (354)
T ss_dssp EECSSCCCSSCCCHHHHHHHHHTGGGT-TSC-CHHH----HHHHHHHHHHHTTSCG-----GGEEEESHHHHHHHHHHHH
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhhC-cCC-CCCc----hHHHHHHHHHHhCCCh-----HHEEEeCChHHHHHHHHHH
Confidence 455544433 35688899988887642 222 1223 3456667899999865 3589999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh--hcCcEEEEeeCCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTL 214 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~ 214 (369)
+..+ +++|+++.++|.++...++..|++++.+|.+++ +.+|+++|+++++ +++++|++++++||
T Consensus 88 l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~np 153 (354)
T 3ly1_A 88 YASL-------------EAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNP 153 (354)
T ss_dssp HCCT-------------TCEEEEESSSCTHHHHHHHHTTCEEEEECCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTT
T ss_pred HhCC-------------CCeEEECCCCchHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCC
Confidence 7432 468999999999999999999999999999864 8999999999999 78999999999999
Q ss_pred cccCCCHHHHHHHHHH--hhhccCCCceEEeecccccccccccCCC-cccc-ccCC-CCcEEEEcCccCCC-CCCCeEEE
Q 017569 215 TGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-FRLP-LVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~--~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~~~~-~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
||.+.|.+++.++++. + ++++|+|++|+.+... ... .... .... ..+.++.+++|+++ .+.+.|++
T Consensus 154 tG~~~~~~~l~~l~~~~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 225 (354)
T 3ly1_A 154 TGTITPADVIEPWIASKPA------NTMFIVDEAYAEFVND--PRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYA 225 (354)
T ss_dssp TCCCCCHHHHHHHHHTCCT------TEEEEEECTTGGGCCC--TTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEE
T ss_pred cCCCcCHHHHHHHHHhCCC------CeEEEEeccHHHhccc--cccCCHHHHhhhcCCCEEEEeeChhhccChhhhheee
Confidence 9999999888888887 7 9999999999875431 100 0111 1112 45677888999986 56678988
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+..+ +.. +.+..... . ++.+ .+.++++...+.. +.+.++ +..++.+++++.|++.|
T Consensus 226 ~~~~-~~~-~~~~~~~~-------~----~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 284 (354)
T 3ly1_A 226 VAHP-TVI-ALMGRYVA-------G----EKIN---FSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLK 284 (354)
T ss_dssp ECCH-HHH-HHHGGGTT-------C----SCCC---HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCH-HHH-HHHHHhcC-------C----CCCC---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 8632 221 22111000 0 1222 3334444444422 445555 78889999999998875
No 78
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.87 E-value=3.5e-21 Score=184.41 Aligned_cols=263 Identities=10% Similarity=0.013 Sum_probs=183.7
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+.+.+. ++++.+.+++.++++.....|... ..++++++++++++.+|.+.+ ....++|+||++|+..++.
T Consensus 26 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~---~~~v~~~~g~~~a~~~~~~ 100 (383)
T 3kax_A 26 LIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQ---KEWIVFSAGIVPALSTSIQ 100 (383)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHHH
T ss_pred eeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCC---hhhEEEcCCHHHHHHHHHH
Confidence 3455555444 346888999988887654444332 577899999999999995431 1358999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC--CccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
++..+ +++|+++.++|.++...++..|++++.+|+++ .++.+|+++|++++++++++|+++.++|
T Consensus 101 ~l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~n 167 (383)
T 3kax_A 101 AFTKE-------------NESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHN 167 (383)
T ss_dssp HHCCT-------------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBT
T ss_pred HhCCC-------------CCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCC
Confidence 87432 46899999999999999999999999999863 2467999999999988999999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C----CCCcEEEEcCccCCC-CCCC
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----PLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~~~Dsi~~~~hK~l~-~p~g 284 (369)
|||.+.| +++|.++|+++ ++++|+|++|+.+... ......+. . ...+.+..+.+|+++ .+.+
T Consensus 168 ptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 238 (383)
T 3kax_A 168 PIGRVWKKEELTKLGSLCTKY------NVIVVADEIHSDIIYA---DHTHTPFASLSEELAARTITCMAPSKTFNIAGLQ 238 (383)
T ss_dssp TTTBCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGC
T ss_pred CCCcCcCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CCCceeHhhcCccccCcEEEEEEChhhccCcchh
Confidence 9999965 66677779999 9999999999875531 11011111 1 134577788999986 5567
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
.|++++.+++.. ..+.......+ + ++.+ .+.++++...+ +.+.+.++ +..++.+++.+.|++
T Consensus 239 ~G~~~~~~~~~~-~~~~~~~~~~~-----~---~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 304 (383)
T 3kax_A 239 ASIIIIPNEKLR-QAFTSIQYRQG-----F---HGLN---IFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKD 304 (383)
T ss_dssp CEEEECCCHHHH-HHHHHHHHHTT-----C---CCCC---HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred heEEEeCCHHHH-HHHHHHHhhcc-----c---CCCC---HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 898887543322 12111000000 0 1222 33333334433 33445555 788899999999987
No 79
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.87 E-value=4.7e-21 Score=186.87 Aligned_cols=270 Identities=12% Similarity=0.041 Sum_probs=189.0
Q ss_pred ccccccccC-CChHHHHHHHHHHhcc---CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCCchHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIML 132 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~ 132 (369)
++|..+.+. ++++.+.+++.+.++. ....|....+..++++++.+++.+.+|.+.+ .. .+++|+||++|+..
T Consensus 40 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~---~~~~v~~~~g~~~a~~~ 116 (429)
T 1yiz_A 40 LNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN---PMTEVLVTVGAYEALYA 116 (429)
T ss_dssp EECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC---TTTSEEEESHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC---CcCCEEEecChHHHHHH
Confidence 344444443 3457788888888865 2334444456889999999999998896532 13 58999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC---------ccccCHHHHHHHHhhcC
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDENT 203 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~~ 203 (369)
++.++..+ +++|+++.++|..+...++..|++++.+|++.+ ++.+|+++|++++++++
T Consensus 117 ~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 183 (429)
T 1yiz_A 117 TIQGHVDE-------------GDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT 183 (429)
T ss_dssp HHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTE
T ss_pred HHHHhcCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCc
Confidence 98887432 468999999999999999999999999998764 47899999999998889
Q ss_pred cEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-ccc-CCCCcEEEEcCccC
Q 017569 204 ICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKY 278 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Dsi~~~~hK~ 278 (369)
++|+++.++||||.+. ++++|+++|+++ ++++|+|++|+++...- .+...+ .+. ..+.|.+..+++|+
T Consensus 184 ~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~s~sK~ 256 (429)
T 1yiz_A 184 KMIIINTPHNPLGKVMDRAELEVVANLCKKW------NVLCVSDEVYEHMVFEP-FEHIRICTLPGMWERTITIGSAGKT 256 (429)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTT-SCCCCGGGSTTTGGGEEEEEEHHHH
T ss_pred eEEEECCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccccccccCC-CCCcChhhccCCcCceEEEecchhc
Confidence 9999999999999996 499999999999 99999999998754310 010111 121 23678899999998
Q ss_pred CC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh----c--HhhHHHH--HhhHHH
Q 017569 279 GL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL----G--FEVIPSF--CCVDHK 349 (369)
Q Consensus 279 l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l----g--~~G~~~~--~~~~~a 349 (369)
++ .+..+|++++++ +.. +.+.....+. . ++.+.....++..+|+.. + .+.++++ +..++.
T Consensus 257 ~~~~G~r~G~~~~~~-~~~-~~l~~~~~~~-----~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 257 FSLTGWKIGWAYGPE-ALL-KNLQMVHQNC-----V----YTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR 325 (429)
T ss_dssp HTCGGGCCEEEESCH-HHH-HHHHHHHHTT-----T----CCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred cCCCCcceEEEEeCH-HHH-HHHHHHHhhc-----c----cCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHH
Confidence 75 234489998753 222 2221100000 1 122222233344455541 3 3445555 778889
Q ss_pred HHHHHHHHhcCC
Q 017569 350 KLSSFFVIHSSY 361 (369)
Q Consensus 350 ~~l~~~L~~~g~ 361 (369)
+++.+.|++.|+
T Consensus 326 ~~l~~~L~~~g~ 337 (429)
T 1yiz_A 326 DYMASFLAEVGM 337 (429)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHhCCC
Confidence 999999988653
No 80
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.87 E-value=1.4e-21 Score=186.86 Aligned_cols=248 Identities=12% Similarity=0.050 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
++.+.+++.+.+..... ...+...++|++ +++++|.+. +++++|||+|+..++.++.-
T Consensus 15 ~~~v~~a~~~~~~~~~~--~~~~~~~~l~~~----la~~~~~~~-------~~~~~sGt~al~~al~~~~~--------- 72 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHGQY--ILGPEVTELEDR----LADFVGAKY-------CISCANGTDALQIVQMALGV--------- 72 (367)
T ss_dssp HHHHHHHHHHHHHHCCC--SSCHHHHHHHHH----HHHHHTCSE-------EEEESCHHHHHHHHHHHTTC---------
T ss_pred CHHHHHHHHHHHhcCCc--cCChHHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHhCC---------
Confidence 35677777777765432 344555566555 888888864 89999999999999887621
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
..+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++|
T Consensus 73 ---~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la 146 (367)
T 3nyt_A 73 ---GPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIA 146 (367)
T ss_dssp ---CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred ---CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHH
Confidence 02468999999999999999999999999999876689999999999988888776 888999999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc--CccCCCCCCCeEEEEEeCCCCcccccccccCc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKDDLPDELVFHINY 306 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 306 (369)
+++ ++++|+|++|+.+.. .... .....+ |.++.| +||+++++...|+++.++++.. ..+... ..
T Consensus 147 ~~~------~~~li~D~a~~~g~~--~~~~---~~~~~~-di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~-~~~~~~-~~ 212 (367)
T 3nyt_A 147 SKY------GIPVIEDAAQSFGAS--YKGK---RSCNLS-TVACTSFFPSAPLGCYGDGGAIFTNDDELA-TAIRQI-AR 212 (367)
T ss_dssp HHT------TCCBEEECTTTTTCE--ETTE---ETTSSS-SEEEEECCTTSSSCCSSCCEEEEESCHHHH-HHHHHH-TB
T ss_pred HHc------CCEEEEECccccCCe--ECCe---eccCCC-CEEEEECCCCCcCCCcCceeEEEeCCHHHH-HHHHHH-Hh
Confidence 999 999999999875433 1111 111112 777777 6999966344677776554332 111110 00
Q ss_pred cCCC-CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 307 LGSD-QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 307 ~~~~-~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.+.. .......|.......+.+++++..+. .+++. +..++++++++.|++.|
T Consensus 213 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~--~~~~~~~~~~~~~~~~~~~L~~~~ 267 (367)
T 3nyt_A 213 HGQDRRYHHIRVGVNSRLDTLQAAILLPKLE--IFEEEIALRQKVAAEYDLSLKQVG 267 (367)
T ss_dssp TTEEETTEECSCCCBCCCCHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcCceeeccCcCCCccHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCC
Confidence 0000 00000001111222344444444442 34444 78889999999999886
No 81
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.87 E-value=6.1e-21 Score=184.10 Aligned_cols=266 Identities=12% Similarity=0.045 Sum_probs=183.7
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+...+. ++++.+.+++.+.++.....|... ..++++++.+++++.+|.+.+ ...+++|+||++|+..++.+
T Consensus 34 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~---~~~v~~t~g~~~a~~~~~~~ 108 (399)
T 1c7n_A 34 VPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQ---TDWIINTAGVVPAVFNAVRE 108 (399)
T ss_dssp CCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCC---GGGEEEESSHHHHHHHHHHH
T ss_pred eeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCC---hhhEEEcCCHHHHHHHHHHH
Confidence 344444443 345788888888876543444332 788999999999988885431 13589999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CC-ccccCHHHHHHHHh-hcCcEEEEeeCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EG-YYVMNPVKAVELVD-ENTICVAAILGST 213 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~-~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (369)
+..+ +++|+++.++|.++...++..|++++.+|++ ++ ++.+|+++|+++++ +++++|++++++|
T Consensus 109 l~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~n 175 (399)
T 1c7n_A 109 FTKP-------------GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHN 175 (399)
T ss_dssp HCCT-------------TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBT
T ss_pred hcCC-------------CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCC
Confidence 7432 4689999999999999999999999999885 32 36799999999998 6788999999999
Q ss_pred CcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C----CCCcEEEEcCccCCC-CCCC
Q 017569 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----PLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~~~Dsi~~~~hK~l~-~p~g 284 (369)
|||.+.| +++|+++|+++ ++++|+|++|+.+... ......+. . ...+.+..+.+|+++ .+.+
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 246 (399)
T 1c7n_A 176 PVGRVWKKDELQKIKDIVLKS------DLMLWSDEIHFDLIMP---GYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMG 246 (399)
T ss_dssp TTTBCCCHHHHHHHHHHHHHS------SCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGC
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCcccHHHcCccccCcEEEEEeChhhccccchh
Confidence 9999987 99999999999 9999999999875431 11011111 1 234567778999986 4456
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh-cC
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH-SS 360 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~-~g 360 (369)
+|++++++++.. ..+....... .+ ++.+.....++..++.. +.+.++++ +..++.+++.+.|++ .+
T Consensus 247 ~G~~~~~~~~~~-~~l~~~~~~~-----~~---~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 315 (399)
T 1c7n_A 247 MSNIIIKNPDIR-ERFTKSRDAT-----SG---MPFTTLGYKACEICYKE-CGKWLDGCIKVIDKNQRIVKDFFEVNHP 315 (399)
T ss_dssp CEEEECCCHHHH-HHHHHHHHHT-----TC---CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred eEEEEECCHHHH-HHHHHHHhhc-----cc---CCCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 799987643332 2221100000 00 12222222222233332 34556665 788899999999987 53
No 82
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.87 E-value=8.2e-21 Score=184.33 Aligned_cols=270 Identities=12% Similarity=0.029 Sum_probs=186.5
Q ss_pred cccccccc-----CCChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHh------CCCCCCCCCCCeEEeCC
Q 017569 58 LNLASFVT-----TWMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLF------NTPVADDKTAVGVGTVG 125 (369)
Q Consensus 58 ~~l~~~~~-----~~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~------g~~~~~~~~~~~~~t~G 125 (369)
++|+.+.| .++++.+.+++.++++.. ...|....+..++++++.+++.+.+ |.+.+ ...+++|+|
T Consensus 36 i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~---~~~v~~~~g 112 (416)
T 1bw0_A 36 IKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIV---KDNVVLCSG 112 (416)
T ss_dssp EECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC---GGGEEEESH
T ss_pred EEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC---cceEEEeCC
Confidence 45555543 244677888888887653 2334444578899999888887432 32221 135899999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhhcCc
Q 017569 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTI 204 (369)
Q Consensus 126 gt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~ 204 (369)
|++|+.+++.++..+ +++|+++.++|..+..+++..|++++.+|++++ ++.+|+++|+++++++++
T Consensus 113 ~~~al~~~~~~l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 179 (416)
T 1bw0_A 113 GSHGILMAITAICDA-------------GDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTK 179 (416)
T ss_dssp HHHHHHHHHHHHCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEE
T ss_pred hHHHHHHHHHHhCCC-------------CCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCe
Confidence 999999988887432 468999999999999999999999999998653 478999999999988889
Q ss_pred EEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC---cccccc-C--CCCcEEEEcC
Q 017569 205 CVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD---LEWDFR-L--PLVKSINVSG 275 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~---~~~~~~-~--~~~Dsi~~~~ 275 (369)
+|+++.|+||||.+.| +++|+++|+++ ++++|+|++|+.+... ... ....+. . ..-+.++.+.
T Consensus 180 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (416)
T 1bw0_A 180 LLIVTNPSNPCGSNFSRKHVEDIVRLAEEL------RLPLFSDEIYAGMVFK--GKDPNATFTSVADFETTVPRVILGGT 251 (416)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCCEEEECTTTTCBCC--SSCTTCCCCCTTSSCCSCCEEEEEES
T ss_pred EEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCEEEEEccccccccC--CCCCCCCccCHHHccCCCcEEEEecc
Confidence 9999999999999988 99999999999 9999999999875431 110 011111 1 1123556679
Q ss_pred ccCCCCC-CCeEEEEEeCC-CCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHH
Q 017569 276 HKYGLVY-AGVGWVVWRTK-DDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKK 350 (369)
Q Consensus 276 hK~l~~p-~g~g~l~~~~~-~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~ 350 (369)
+|+++.| ...|+++++++ +... .+.... .+.. ..++.+.....++..+|+..+.++++++ +..++.+
T Consensus 252 sK~~~~~Glr~G~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (416)
T 1bw0_A 252 AKNLVVPGWRLGWLLYVDPHGNGP-SFLEGLKRVGM-------LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 323 (416)
T ss_dssp TTTTSCGGGCCEEEEEECTTCSCH-HHHHHHHHHHH-------HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred hhhCCCCCceEEEEEeeCchhhHH-HHHHHHHHHhc-------cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 9996543 56899998765 3332 221100 0000 0122223333444455554456677776 7889999
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
++.+.|++.
T Consensus 324 ~l~~~L~~~ 332 (416)
T 1bw0_A 324 YLYNHIGEC 332 (416)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhC
Confidence 999999886
No 83
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.87 E-value=4.4e-20 Score=176.57 Aligned_cols=250 Identities=12% Similarity=0.015 Sum_probs=179.3
Q ss_pred CChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
++++.+.+++.+.++.. ...|....+ .++++++.+++.+.+|.+.+ ....++|+|+++++..++.++..+
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~---~~~v~~~~G~~~al~~~~~~l~~~--- 115 (369)
T 3cq5_A 43 PPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVT---RDNLWAANGSNEILQQLLQAFGGP--- 115 (369)
T ss_dssp CCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCC---GGGEEEESHHHHHHHHHHHHHCST---
T ss_pred CCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCC---hHhEEECCChHHHHHHHHHHhcCC---
Confidence 34577888887776542 333333233 68999999999988776532 135899999999998888877432
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHH
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 222 (369)
+++|+++.++|.++...++..|++++.+|.+++ +.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 116 ----------gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 116 ----------GRTALGFQPSYSMHPILAKGTHTEFIAVSRGAD-FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp ----------TCEEEEEESSCTHHHHHHHHTTCEEEEEECCTT-SSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred ----------CCEEEEcCCChHHHHHHHHHcCCEEEEecCCcC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 468999999999999999999999999998754 78999999999988 899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCC-CcEEEEcCccCCC-CCCCeEEEEEeCCCCcccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPL-VKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDE 299 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~-~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~ 299 (369)
++.++|+.+ ++++++|++|+.+..+ +. .... ...+ .+.++.++||+++ .+.++|++++++ +.. ..
T Consensus 185 ~l~~l~~~~------~~~li~De~~~~~~~~---~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~ 252 (369)
T 3cq5_A 185 DVERIINVA------PGIVIVDEAYAEFSPS---PS-ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP-AFI-DA 252 (369)
T ss_dssp HHHHHHHHC------SSEEEEECTTGGGCCS---CC-GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT-HHH-HH
T ss_pred HHHHHHHhC------CCEEEEECCchhhcCC---cc-hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH-HHH-HH
Confidence 999999999 9999999999876531 11 1111 1123 5577888999986 344679998853 222 22
Q ss_pred cccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc-HhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 300 ~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+.... .. ++. ..+.++++...+. .+.+.++ +..++.+++.+.|++.|
T Consensus 253 l~~~~-------~~----~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 302 (369)
T 3cq5_A 253 VMLVR-------LP----YHL---SALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELG 302 (369)
T ss_dssp HHTTS-------CT----TCS---CHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcC-------CC----CCC---CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 21100 01 111 1334444444442 2345555 78889999999998765
No 84
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.86 E-value=1.1e-21 Score=187.61 Aligned_cols=259 Identities=15% Similarity=0.056 Sum_probs=172.9
Q ss_pred CCccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 56 PRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 56 p~~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
+.++++...+.. .+ +.+.+.+.+.... +...+...++++. +++++|.+. +++++||++|+..++.
T Consensus 7 ~~~~l~~~~~~~-~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~----la~~~~~~~-------~~~~~~gt~a~~~~~~ 71 (374)
T 3uwc_A 7 PYSYLERQFADI-EP-YLNDLREFIKTAD--FTLGAELEKFEKR----FAALHNAPH-------AIGVGTGTDALAMSFK 71 (374)
T ss_dssp CSCCHHHHTSSC-HH-HHHHHHHHHHHTC--CSSCHHHHHHHHH----HHHHTTCSE-------EEEESCHHHHHHHHHH
T ss_pred eeeccccCCCCc-hH-HHHHHHHHHHcCC--cccChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHH
Confidence 334444444433 34 7777777776543 3344555555554 888888863 8999999999988888
Q ss_pred HH-HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 136 AF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 136 ~~-~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
++ .. .+++|+++.++|.++..+++..|++++.+|+++ ++.+|+++|++++++++++|+ ++||
T Consensus 72 ~~~~~-------------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~---~~n~ 134 (374)
T 3uwc_A 72 MLNIG-------------AGDEVITCANTFIASVGAIVQAGATPVLVDSEN-GYVIDPEKIEAAITDKTKAIM---PVHY 134 (374)
T ss_dssp HTTCC-------------TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TSSBCGGGTGGGCCTTEEEEC---CBCG
T ss_pred HcCCC-------------CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CCCcCHHHHHHhCCCCceEEE---EeCC
Confidence 76 22 146899999999999999999999999999984 589999999999988887776 8899
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRT 292 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~ 292 (369)
+|.+.|+++|.++|+++ ++++|+|++|+.+.. .... .. ....|.++.++| |+++++...|+++.++
T Consensus 135 ~G~~~~~~~i~~~~~~~------~~~li~D~~~~~g~~--~~~~---~~-~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~ 202 (374)
T 3uwc_A 135 TGNIADMPALAKIAKKH------NLHIVEDACQTILGR--INDK---FV-GSWGQFACFSLHPLKNLNVWSDAGVIITHS 202 (374)
T ss_dssp GGCCCCHHHHHHHHHHT------TCEEEEECTTCTTCE--ETTE---ET-TSSSSEEEEECSSSSSSCCSSCCEEEEESC
T ss_pred cCCcCCHHHHHHHHHHc------CCEEEEeCCCccCce--eCCe---ec-cccccEEEEeCCCCCcCCccceeEEEEeCC
Confidence 99999999999999999 999999999986543 1111 11 112599999977 9996634467777655
Q ss_pred CCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+... ..+.....+...........+.... ...+.+++.....++++++ +..++++++++.|.+.+.
T Consensus 203 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 270 (374)
T 3uwc_A 203 DEYA-EKLRLYRNHGLINRDVCVEYGINCR--MDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSE 270 (374)
T ss_dssp HHHH-HHHHHHTBTTEEETTEESSCCCBCB--CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTT
T ss_pred HHHH-HHHHHHHhcCccccCccccccccCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 3322 1111100000000000000011111 1122233333334566666 888999999999998774
No 85
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.86 E-value=1.3e-20 Score=179.60 Aligned_cols=258 Identities=13% Similarity=0.017 Sum_probs=177.0
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+...+. ++++.+.+++.+.++... .|....+ .+++ +.+++++|+++ ..+++|+||++|+..++.
T Consensus 32 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~y~~~~~-~~lr----~~la~~~~~~~-----~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 32 VIKLASNENPFGTPPKAIECLRQNANKAH-LYPDDSM-IELK----STLAQKYKVQN-----ENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp CEECSSCCCTTCSCHHHHHHHHHHGGGTT-SCCCTTC-HHHH----HHHHHHHTCCG-----GGEEEESSHHHHHHHHHH
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhc-cCCCCCh-HHHH----HHHHHHhCCCc-----ceEEECCCHHHHHHHHHH
Confidence 3455544333 356788999888886432 2222222 4444 45788888765 358999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++.++ +++|+++.++|..+...++..|++++.+|++.+++ +|+++|++++++++++|++++|+|||
T Consensus 101 ~l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~npt 166 (365)
T 3get_A 101 SKLNS-------------KNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPL 166 (365)
T ss_dssp HHCCT-------------TCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTT
T ss_pred HHhCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCC
Confidence 87432 47899999999999999999999999999833358 99999999999999999999999999
Q ss_pred ccCCCHHHHHHHHH--HhhhccCCCceEEeecccccccc--cccCCCcccc-ccCCCCcEEEEcCccCCC-CCCCeEEEE
Q 017569 216 GEFEDVKLLHDLLT--KKNEETGWDTPIHVDAASGGFIA--PFLYPDLEWD-FRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (369)
Q Consensus 216 G~~~~l~~I~~l~~--~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~-~p~g~g~l~ 289 (369)
|.+.|++++.++++ ++ ++++++|++|+.+.. .--.+..... ......+.+..+++|+++ .+.+.|+++
T Consensus 167 G~~~~~~~l~~l~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 167 GECLDASEATEFIKGVNE------DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp CCCCCHHHHHHHHHTSCT------TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCcCHHHHHHHHHhCCC------CcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 99999999999988 66 999999999986541 1000000111 112245677788999985 556789998
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc-HhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. +++.. ..+..... . .+.+ .+.++++...+. .+.+.++ +..++.+++.+.|++.|+
T Consensus 241 ~-~~~~~-~~~~~~~~-------~----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 299 (365)
T 3get_A 241 A-NANII-SAFYKLRA-------P----FNVS---NLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKHNI 299 (365)
T ss_dssp E-CHHHH-HHHHHHSC-------T----TCSC---HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred c-CHHHH-HHHHHhcC-------C----CCcC---HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7 33222 22111000 1 1122 233333333332 2455555 788899999999998753
No 86
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.86 E-value=1.7e-21 Score=187.67 Aligned_cols=248 Identities=10% Similarity=0.008 Sum_probs=167.1
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (369)
+.+.+.+.+.+..+... ...++..+++++ +++++|.+. +++++||++|+..++.++ ..
T Consensus 36 ~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~----la~~~~~~~-------~i~~~~gt~al~~~l~~~~~~--------- 94 (391)
T 3dr4_A 36 GNERDYVLECMDTTWIS-SVGRFIVEFEKA----FADYCGVKH-------AIACNNGTTALHLALVAMGIG--------- 94 (391)
T ss_dssp SSHHHHHHHHHHHTCCS-SCSHHHHHHHHH----HHHHHTCSE-------EEEESSHHHHHHHHHHHHTCC---------
T ss_pred HHHHHHHHHHHHcCCcc-CCChHHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 55677777776654322 134555555555 788888863 899999999999998887 32
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
.+++|+++.++|.++..+++..|++++.++++++++.+|+++|++++++++++|+ ++||+|.+.|+++|.++|
T Consensus 95 ----~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~ 167 (391)
T 3dr4_A 95 ----PGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVA 167 (391)
T ss_dssp ----TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred ----CcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHH
Confidence 1468999999999999999999999999999865689999999999998888776 578999999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCcc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL 307 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~ 307 (369)
+++ ++++|+|++|+.+... .+. ... ...+++++++.||++.++ ..|+++.+++... ..+..-..+.
T Consensus 168 ~~~------~~~li~D~a~~~g~~~--~~~---~~~~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~-~~~~~~~~~g 234 (391)
T 3dr4_A 168 RRH------NLLVIEDAAEAVGATY--RGK---KSGSLGDCATFSFFGNAIITTG-EGGMITTNDDDLA-AKMRLLRGQG 234 (391)
T ss_dssp HHT------TCEEEEECTTCTTCEE--TTE---ETTSSSSEEEEECBTTSSSCCB-SCEEEEESCHHHH-HHHHHHHBTT
T ss_pred HHc------CCEEEEECcccccceE--CCe---eecccCCEEEEECCCCCcCCcC-CeEEEEECCHHHH-HHHHHHHhcC
Confidence 999 9999999999864431 111 111 223666666699999664 4577766543222 1111000000
Q ss_pred CC--CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 308 GS--DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 308 ~~--~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ....+...+..... ..+.+++.....++++++ +..++++++++.|++.|
T Consensus 235 ~~~~~~~~~~~~g~~~~~--~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 289 (391)
T 3dr4_A 235 MDPNRRYWFPIVGFNYRM--TNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLG 289 (391)
T ss_dssp CCTTSTTCCSSCCCBCBC--CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCCCCcccccccccccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 00 00000111212121 222233333334566666 88899999999999874
No 87
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.86 E-value=9.7e-21 Score=181.07 Aligned_cols=267 Identities=9% Similarity=-0.021 Sum_probs=185.4
Q ss_pred cCCCCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 53 DGNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 53 ~~~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
+++..++|+...+. ++++.+.+++.+.+......|.. .+ .++++++.+++.+.+|.+.+ ....++|+||++|+.
T Consensus 21 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~---~~~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 21 YGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQAR---PEWIFPIPDVVRGLY 95 (377)
T ss_dssp SCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHH
T ss_pred cCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCC---HHHEEEeCChHHHHH
Confidence 44555566555443 34678889988888764444444 44 78899999999988886642 245899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
.++.++..+ +++|+++.++|.++...++..|++++.+|++++ +|+++|++++++++++|+++.|
T Consensus 96 ~~~~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~d~~~l~~~l~~~~~~v~i~~p 159 (377)
T 3fdb_A 96 IAIDHFTPA-------------QSKVIVPTPAYPPFFHLLSATQREGIFIDATGG---INLHDVEKGFQAGARSILLCNP 159 (377)
T ss_dssp HHHHHHSCT-------------TCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS---CCHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHhcCC-------------CCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC---CCHHHHHHHhccCCCEEEEeCC
Confidence 988887432 468999999999999999999999999999864 9999999999999999999999
Q ss_pred CCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc---CCCCcEEEEcCccCCC-CCCC
Q 017569 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---LPLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 212 ~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---~~~~Dsi~~~~hK~l~-~p~g 284 (369)
+||||.+.| +++|+++|+++ ++++|+|++|+.+... .......+. ....+.+..+.+|+++ .+.+
T Consensus 160 ~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 231 (377)
T 3fdb_A 160 YNPLGMVFAPEWLNELCDLAHRY------DARVLVDEIHAPLVFD--GQHTVAAGVSDTAASVCITITAPSKAWNIAGLK 231 (377)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGBSS--SCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHc------CCEEEEEcccchhhcC--CCCCcccHHHccCCCcEEEEEeChHhccCcchh
Confidence 999999864 77788889999 9999999999875431 101111221 0123466778999984 5567
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.|++++.+++.. ..+.....+. .++-+.....++..+++. +.+.++++ +..++.+++.+.|++.
T Consensus 232 ~G~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (377)
T 3fdb_A 232 CAQIIFSNPSDA-EHWQQLSPVI---------KDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKR 297 (377)
T ss_dssp CEEEECCSHHHH-HHHHHSCHHH---------HCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred heEEEeCCHHHH-HHHHHHHHhh---------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888776543322 2211100000 012222222222333332 23455555 7888999999999873
No 88
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.86 E-value=1e-20 Score=181.21 Aligned_cols=270 Identities=11% Similarity=-0.048 Sum_probs=185.0
Q ss_pred cCCCCccccccccCC-ChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHH
Q 017569 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 53 ~~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (369)
.++..++|+...+.. +++.+.+++.+.+... ...|....+..++++++.+++.+.+|.+.+. ...+++|+|+++|+
T Consensus 23 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~--~~~v~~~~g~~~a~ 100 (376)
T 2dou_A 23 RGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP--RREALALIGSQEGL 100 (376)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT--TTSEEEESSHHHHH
T ss_pred cCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCcHHHH
Confidence 344445565555442 3577889988887543 2333333467889999888888888986321 12589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
..++.++.++ +++|+++.++|..+...++..|++++.+|+ ++++.+|+++|++++++++++|+++.
T Consensus 101 ~~~~~~l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~ 166 (376)
T 2dou_A 101 AHLLLALTEP-------------EDLLLLPEVAYPSYFGAARVASLRTFLIPL-REDGLADLKAVPEGVWREAKVLLLNY 166 (376)
T ss_dssp HHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHTTCEEEEECB-CTTSSBCGGGSCHHHHHHEEEEEECS
T ss_pred HHHHHHhcCC-------------CCEEEECCCCcHhHHHHHHHcCCEEEEeeC-CCCCCCCHHHHHHhhccCceEEEECC
Confidence 9988887432 468999999999999999999999999998 44578999999999988899999999
Q ss_pred CCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCCCcEEEEcCccCCC-CCCCe
Q 017569 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGV 285 (369)
Q Consensus 211 ~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~ 285 (369)
|+||||.+.| +++|+++|+++ ++++|+|++|+.+...- .+...... .....+.+..+++|+++ .+.+.
T Consensus 167 p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (376)
T 2dou_A 167 PNNPTGAVADWGYFEEALGLARKH------GLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRL 239 (376)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCC
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhhee
Confidence 9999999865 78899999999 99999999998765310 01001111 11245677788999985 44568
Q ss_pred EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
|+++.++ +.. ..+....... . ++.+ .+.+.++...+ +.+.+.++ +..++.+++.+.|++.
T Consensus 240 G~~~~~~-~~~-~~l~~~~~~~-----~----~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 240 GFALGSE-EAL-ARLERVKGVI-----D----FNQY---AGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp EEEEECH-HHH-HHHHHHHHHH-----C----CCSC---HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEecCH-HHH-HHHHHHHHhc-----c----cCCC---HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9987642 222 2221100000 0 1111 22333333333 24456655 7788899999999875
No 89
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.86 E-value=5.5e-21 Score=184.04 Aligned_cols=249 Identities=12% Similarity=-0.047 Sum_probs=171.9
Q ss_pred ChHHHHHHHHHHhccCCCCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.++.+.+++.+.++.....+. ...+......++++++++++|.+. .+++++|++|+..++.++.++
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~sGt~a~~~~l~~~~~~---- 126 (399)
T 3tqx_A 58 DHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTDD-------TILYSSCFDANGGLFETLLGP---- 126 (399)
T ss_dssp TCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHTTHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCCc-------EEEECchHHHHHHHHHHhcCC----
Confidence 357777877777654221111 112344556677788999999863 566677799998888776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCcccC
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (369)
++.|+++.++|.++...++..|++++.+|. +|+++|++++++ ++++|+++.++||||.+
T Consensus 127 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~ 191 (399)
T 3tqx_A 127 ---------EDAIISDELNHASIIDGIRLCKAQRYRYKN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGII 191 (399)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHSCCSEEEEECT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEE
T ss_pred ---------CCEEEECCcccHHHHHHHHHcCCceeEeCC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCc
Confidence 469999999999999999999999988875 356788888876 78999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-c-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 219 ~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
.|+++|.++|+++ ++++|+|++|+.+..+.. ....... . ....|.++.++||+++++.| |+++.++ +..
T Consensus 192 ~~l~~i~~l~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~ 262 (399)
T 3tqx_A 192 ADLKSICDLADKY------NALVMVDDSHAVGFIGEN-GRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EII 262 (399)
T ss_dssp CCHHHHHHHHHHT------TCEEEEECTTTTTTSSTT-SCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHH
T ss_pred CCHHHHHHHHHHc------CCEEEEECCccccccCCC-CCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHH
Confidence 9999999999999 999999999974332100 0001111 1 23679999999999986766 8887643 222
Q ss_pred cccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 297 PDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 297 ~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.+.. ...|.. .++.+.....++..+++.+. ++..++ +..++.+++.+.|++.|+
T Consensus 263 -~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~ 320 (399)
T 3tqx_A 263 -EWLRNRSRPYLF--------SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGF 320 (399)
T ss_dssp -HHHHHHCHHHHS--------SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHhCcceec--------cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22211 111211 12333333445555555553 455555 889999999999998764
No 90
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=2.2e-20 Score=179.83 Aligned_cols=255 Identities=9% Similarity=0.005 Sum_probs=177.2
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHH-HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTE-LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~-le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
++++.+.+++.+.++.....|... ..+ +++++.+++.+.+|.+.+ ...+++|+|+++|+.+++.++..+
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~---~~~v~~t~g~~~al~~~~~~l~~~----- 110 (390)
T 1d2f_A 41 ATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAID---SQTVVYGPSVIYMVSELIRQWSET----- 110 (390)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCC---GGGEEEESCHHHHHHHHHHHSSCT-----
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCC---HHHEEEcCCHHHHHHHHHHHhcCC-----
Confidence 345788999888886543344332 567 899999999988885432 135899999999999988876431
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC--ccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCC--
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-- 220 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~-- 220 (369)
+++|+++.++|..+...++..|++++.+|++.+ ++.+|+++|++++++ ++++|+++.|+||||.+.|
T Consensus 111 --------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~ 182 (390)
T 1d2f_A 111 --------GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCD 182 (390)
T ss_dssp --------TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTT
T ss_pred --------CCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHH
Confidence 468999999999999999999999999998642 367999999999986 7889999999999999865
Q ss_pred -HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C-CCC-cEEEEcCccCCC-CCCCeEEEEEeCCCC
Q 017569 221 -VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLV-KSINVSGHKYGL-VYAGVGWVVWRTKDD 295 (369)
Q Consensus 221 -l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~-Dsi~~~~hK~l~-~p~g~g~l~~~~~~~ 295 (369)
+++|+++|+++ ++++|+|++|+.+... ......+. + ... |. ..+.+|+++ .+.++|++++++++.
T Consensus 183 ~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~ 252 (390)
T 1d2f_A 183 ELEIMADLCERH------GVRVISDEIHMDMVWG---EQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSS 252 (390)
T ss_dssp HHHHHHHHHHHT------TCEEEEECTTTTCBCS---SSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHH
T ss_pred HHHHHHHHHHHc------CCEEEEEccccccccC---CCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHH
Confidence 89999999999 9999999999875431 11111111 1 122 55 888999985 445679998865333
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHh
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIH 358 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~ 358 (369)
. ..+..... +. ..+ ++.+.....++..+++. +.+.++++ +..++.+++.+.|++
T Consensus 253 ~-~~~~~~~~--~~--~~~---~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (390)
T 1d2f_A 253 R-DAYLSALK--GR--DGL---SSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNA 308 (390)
T ss_dssp H-HHHHHHHH--TT--SCC---CSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHh--hh--ccc---CCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 12111000 00 010 12222222223333432 34455555 778889999999987
No 91
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.86 E-value=8.5e-21 Score=183.98 Aligned_cols=267 Identities=11% Similarity=-0.057 Sum_probs=185.3
Q ss_pred ccccccccCC-ChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
++|+.+.+.. +++.+.+++.++++.. ...|....+..++++++.+++++.+|.+.+. ...+++|+|+++|+..++.
T Consensus 50 idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~v~~t~G~~~al~~~~~ 127 (404)
T 2o1b_A 50 INMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK--EDEVCILYGTKNGLVAVPT 127 (404)
T ss_dssp EECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT--TTSEEEESSHHHHHHHHHH
T ss_pred EecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--cccEEEcCCcHHHHHHHHH
Confidence 4555544432 3577888888887542 2233334578899999999999888986311 1248999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++..+ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|+++.|+|||
T Consensus 128 ~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 194 (404)
T 2o1b_A 128 CVINP-------------GDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPT 194 (404)
T ss_dssp HHCCT-------------TCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTT
T ss_pred HhcCC-------------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCC
Confidence 87432 46899999999999999999999999999976457799999999998889999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEE
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~ 290 (369)
|.+.| +++|+++|+++ ++++++|++|+.+...- .+.....+. ..+.+.++.+++|+++ .+.++|+++.
T Consensus 195 G~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 267 (404)
T 2o1b_A 195 GSTATKEVFDEAIAKFKGT------DTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG 267 (404)
T ss_dssp CCCCCHHHHHHHHHHHTTS------SCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE
T ss_pred CccCCHHHHHHHHHHHHHc------CCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEec
Confidence 99864 78899999999 99999999998754310 010011111 1135677889999986 4456899877
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh--cHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l--g~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
++ +.. ..+........ ++.+ .+.++++...+ +.+.++++ +..++.+++.+.|++.|
T Consensus 268 ~~-~~~-~~l~~~~~~~~---------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 327 (404)
T 2o1b_A 268 NK-DMI-QALKKYQTHTN---------AGMF---GALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD 327 (404)
T ss_dssp CH-HHH-HHHHHHHHHHC---------CCCC---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CH-HHH-HHHHHHHhhcc---------CCCC---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 43 222 22211000000 1122 23333333333 34456665 77888999999998875
No 92
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.86 E-value=4.8e-21 Score=181.51 Aligned_cols=255 Identities=13% Similarity=0.064 Sum_probs=173.4
Q ss_pred cccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH
Q 017569 59 NLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (369)
Q Consensus 59 ~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (369)
.|.+..+.++++.+.+++.+.+...... + +...+++++++++++++| +. ..+++|+||++|+..++.+++
T Consensus 11 d~~~~~~~~~~~~v~~a~~~~~~~~~~~---~-~~~~~~~~l~~~la~~~g-~~-----~~v~~~~~gt~a~~~al~~~~ 80 (356)
T 1v72_A 11 GFSSDNIAGASPEVAQALVKHSSGQAGP---Y-GTDELTAQVKRKFCEIFE-RD-----VEVFLVPTGTAANALCLSAMT 80 (356)
T ss_dssp BCSCGGGCCCCHHHHHHHHHTTSSCCCS---T-TCSHHHHHHHHHHHHHHT-SC-----CEEEEESCHHHHHHHHHHTSC
T ss_pred eeccCCccCCCHHHHHHHHhhccCcccc---c-ccchHHHHHHHHHHHHhC-CC-----CcEEEeCCccHHHHHHHHHhc
Confidence 3444444556688888888775321111 1 234566788889999999 32 237999999999999888764
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHHH--Hhhh--cceeEEEeccCCccccCHHHHHH-HHhh-------cCcEE
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF--ARYF--EVELKEVKLEEGYYVMNPVKAVE-LVDE-------NTICV 206 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~--~~~~--G~~v~~v~~~~~~~~~d~~~L~~-~i~~-------~~~~v 206 (369)
.+ +++|+++.++|+++... +... |++++.+|.+ ++.+|+++|++ ++++ ++++|
T Consensus 81 ~~-------------gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v 145 (356)
T 1v72_A 81 PP-------------WGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACV 145 (356)
T ss_dssp CT-------------TEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEE
T ss_pred CC-------------CCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC--CCeEcHHHHHHHhhhcchhhccCCceEE
Confidence 32 46899999999987766 7777 9999888875 37899999999 8876 67899
Q ss_pred EEeeCCCCccc---CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC-CCCcEEEEcCccCCCCC
Q 017569 207 AAILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVY 282 (369)
Q Consensus 207 ~~~~~~~~tG~---~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~Dsi~~~~hK~l~~p 282 (369)
+++.++| +|. .+++++|.++|+++ ++++|+|++|+.+...+... ....+.+ .++|++++++||+ +.|
T Consensus 146 ~~~~~~~-tG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~sK~-g~~ 216 (356)
T 1v72_A 146 SITQATE-VGSIYTLDEIEAIGDVCKSS------SLGLHMDGSRFANALVSLGC-SPAEMTWKAGVDALSFGATKN-GVL 216 (356)
T ss_dssp EEESSCT-TSCCCCHHHHHHHHHHHHHT------TCEEEEEETTHHHHHHHHTC-CTTTTTGGGTCCEEEECCGGG-TCS
T ss_pred EEEcCCC-CCccCCHHHHHHHHHHHHHc------CCeEEEEchhhHhHhccCCC-CHHHhhhhhcCCEEEEecccC-CCc
Confidence 9998865 999 57799999999999 99999999997543211110 0111111 2689999999999 568
Q ss_pred CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
.|+|+++. +++.. ..+.....+.+ +........+...+..+..+.+.++ +..++++++++.|++.
T Consensus 217 ~G~g~~~~-~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (356)
T 1v72_A 217 AAEAIVLF-NTSLA-TEMSYRRKRAG----------HLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL 283 (356)
T ss_dssp SCEEEEES-SGGGH-HHHHHHHHHTT----------CCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccEEEEE-CHHHH-hhHHHHhhccC----------chhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 88888876 33332 22111000111 1011112333345566655555554 7889999999999875
No 93
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.86 E-value=8.7e-21 Score=184.40 Aligned_cols=271 Identities=12% Similarity=0.040 Sum_probs=190.2
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhccCC--CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINKNY--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
..++|+.+.+.. +++.+.+++.+++.... ..|....+..++++++.+++.+.+|.+.+. ...+++|+||++|+..
T Consensus 29 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~--~~~i~~~~g~~~a~~~ 106 (422)
T 3fvs_A 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP--LRNVLVTVGGYGALFT 106 (422)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH--HHHEEEESHHHHHHHH
T ss_pred CceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCcEEEECChHHHHHH
Confidence 445666666553 45788888888876533 344444577899999999999999976421 0258999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-----------CccccCHHHHHHHHhh
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-----------GYYVMNPVKAVELVDE 201 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-----------~~~~~d~~~L~~~i~~ 201 (369)
++.++..+ +++|+++.++|..+...++..|++++.+|++. +++.+|+++|++++++
T Consensus 107 ~~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~ 173 (422)
T 3fvs_A 107 AFQALVDE-------------GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS 173 (422)
T ss_dssp HHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT
T ss_pred HHHHHcCC-------------CCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC
Confidence 98887432 46899999999999999999999999999875 2468999999999998
Q ss_pred cCcEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc----CCCCcEEEEc
Q 017569 202 NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVS 274 (369)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~----~~~~Dsi~~~ 274 (369)
++++|+++.|+||||.+. ++++|+++|+++ ++++|+|++|+.+... ......+. ....+.+..+
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~S 244 (422)
T 3fvs_A 174 RTKALVLNTPNNPLGKVFSREELELVASLCQQH------DVVCITDEVYQWMVYD---GHQHISIASLPGMWERTLTIGS 244 (422)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSTTTGGGEEEEEE
T ss_pred CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEEccchhhccC---CCCCCChhhcccccCcEEEEec
Confidence 999999999999999997 699999999999 9999999999875431 11111111 1134466777
Q ss_pred CccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH------hcHhhHHHH--Hh
Q 017569 275 GHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR------LGFEVIPSF--CC 345 (369)
Q Consensus 275 ~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~------lg~~G~~~~--~~ 345 (369)
.+|.++ .+.+.|+++.+++ .. ..+.. .... .. ++-+.....++..++.. ...+.++++ +.
T Consensus 245 ~sK~~g~~G~r~G~~~~~~~-~~-~~~~~---~~~~--~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (422)
T 3fvs_A 245 AGKTFSATGWKVGWVLGPDH-IM-KHLRT---VHQN--SV----FHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAM 313 (422)
T ss_dssp HHHHHTCGGGCCEEEECCHH-HH-HHHHH---HHHT--TT----CCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHH
T ss_pred chhccCCccceEEEEEeCHH-HH-HHHHH---HHhh--cc----CCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHH
Confidence 899985 4577899886432 21 12111 0000 00 11122222333333432 123445555 78
Q ss_pred hHHHHHHHHHHHhcCC
Q 017569 346 VDHKKLSSFFVIHSSY 361 (369)
Q Consensus 346 ~~~a~~l~~~L~~~g~ 361 (369)
.++.+++.+.|++.|+
T Consensus 314 ~~~~~~l~~~L~~~g~ 329 (422)
T 3fvs_A 314 QRCRDHMIRSLQSVGL 329 (422)
T ss_dssp HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 8899999999998764
No 94
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.86 E-value=1.3e-20 Score=182.27 Aligned_cols=273 Identities=10% Similarity=-0.019 Sum_probs=189.1
Q ss_pred CccccccccC-CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
.++|+.+.+. ++++.+.+++.+++... ...|....+..++++++.+++.+.+|.+.+. ...+++|+||++|+..++
T Consensus 25 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~--~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 25 VVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP--NEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT--TTSEEEESHHHHHHHHHH
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCcHHHHHHHH
Confidence 3566666665 34678899988888653 2344444567899999999999999876421 135899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC----------CccccCHHHHHHHHhhcCc
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE----------GYYVMNPVKAVELVDENTI 204 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~----------~~~~~d~~~L~~~i~~~~~ 204 (369)
.++.++ +++|+++.++|..+...++..|++++.+|++. .++.+|+++|+++++++++
T Consensus 103 ~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~ 169 (410)
T 3e2y_A 103 QGLVDP-------------GDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTK 169 (410)
T ss_dssp HHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEE
T ss_pred HHhcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCce
Confidence 887432 46899999999999999999999999999862 3478999999999988899
Q ss_pred EEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~ 280 (369)
+|+++.|+||||.+ +++++|+++|+++ ++++|+|++|+.+...--.+.....+. ....+.+..+.+|.++
T Consensus 170 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g 243 (410)
T 3e2y_A 170 AIILNTPHNPLGKVYTRQELQVIADLCVKH------DTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFS 243 (410)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSS
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcC
Confidence 99999999999999 5799999999999 999999999987543100000001111 1133466667899986
Q ss_pred -CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH------hcHhhHHHH--HhhHHHHH
Q 017569 281 -VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR------LGFEVIPSF--CCVDHKKL 351 (369)
Q Consensus 281 -~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~------lg~~G~~~~--~~~~~a~~ 351 (369)
.+.+.|+++.+++ .. ..+... ... .. ++-+.....++..+|+. ...+.+.++ +..++.++
T Consensus 244 ~~G~r~G~~~~~~~-~~-~~~~~~---~~~--~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (410)
T 3e2y_A 244 VTGWKLGWSIGPAH-LI-KHLQTV---QQN--SF----YTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312 (410)
T ss_dssp CGGGCCEEEECCHH-HH-HHHHHH---HHT--TT----CCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECHH-HH-HHHHHH---HHh--hc----cCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHH
Confidence 5677898886432 21 121110 000 00 11122222333334432 123445555 77889999
Q ss_pred HHHHHHhcCC
Q 017569 352 SSFFVIHSSY 361 (369)
Q Consensus 352 l~~~L~~~g~ 361 (369)
+.+.|++.|+
T Consensus 313 l~~~L~~~g~ 322 (410)
T 3e2y_A 313 MVRLLNSVGL 322 (410)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHHHHCCC
Confidence 9999998764
No 95
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=3.1e-20 Score=179.63 Aligned_cols=210 Identities=13% Similarity=0.023 Sum_probs=156.3
Q ss_pred CCccccccccC---CChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 56 PRLNLASFVTT---WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 56 p~~~l~~~~~~---~~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
..++|..+.+. .+++.+.+++.++++.. .. |....+..++++++.+++.+.+|.+.+ ...+++|+||++|
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~---~~~v~~t~g~t~a 110 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVS---PENIVITIGGTGA 110 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCC---GGGEEEESHHHHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCC---cceEEEecCHHHH
Confidence 44555555443 24577888888777643 23 444457899999999999888885432 1358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----h--cC
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----E--NT 203 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~--~~ 203 (369)
+..++.++..+ +++|+++.++|..+...++..|++++.+|++++ + +|+++|+++++ + ++
T Consensus 111 ~~~~~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~-~d~~~l~~~l~~~~~~~~~~ 175 (407)
T 2zc0_A 111 LDLLGRVLIDP-------------GDVVITENPSYINTLLAFEQLGAKIEGVPVDND-G-MRVDLLEEKIKELKAKGQKV 175 (407)
T ss_dssp HHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHhcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-C-CCHHHHHHHHHhhhcccCCc
Confidence 99999887432 468999999999999999999999999999764 4 99999999998 6 67
Q ss_pred cEE-EEeeCCCCcccCCCHH---HHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccccCCCCcEEEEcCccC
Q 017569 204 ICV-AAILGSTLTGEFEDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKY 278 (369)
Q Consensus 204 ~~v-~~~~~~~~tG~~~~l~---~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~Dsi~~~~hK~ 278 (369)
++| +++.++||||.+.|++ +|+++|+++ ++++|+|++|+.+.... .+... ..+...+.+.+..+.+|+
T Consensus 176 ~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~ 248 (407)
T 2zc0_A 176 KLIYTIPTGQNPMGVTMSMERRKALLEIASKY------DLLIIEDTAYNFMRYEG-GDIVPLKALDNEGRVIVAGTLSKV 248 (407)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBSSC-SSCCCGGGGCSSCCEEEEEESTTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEECCCcccccCC-CCCCChhhcCCCCCEEEEcccccc
Confidence 776 4678999999998876 999999999 99999999998764310 00000 112112334566678999
Q ss_pred CCCCCCeEEEEEe
Q 017569 279 GLVYAGVGWVVWR 291 (369)
Q Consensus 279 l~~p~g~g~l~~~ 291 (369)
++.+..+|+++++
T Consensus 249 ~~~G~r~G~~~~~ 261 (407)
T 2zc0_A 249 LGTGFRIGWIIAE 261 (407)
T ss_dssp TCTTSCCEEEECC
T ss_pred cCCCcceEEEecC
Confidence 9844468999874
No 96
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.85 E-value=1.8e-20 Score=180.47 Aligned_cols=272 Identities=14% Similarity=0.009 Sum_probs=185.8
Q ss_pred CCCCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCC-CeEEeCCchHHH
Q 017569 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTA-VGVGTVGSSEAI 130 (369)
Q Consensus 54 ~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~-~~~~t~Ggt~a~ 130 (369)
++..++|+...+.. .++.+.+++.+.+. ....|....+..++++++.+++++.+|.+ .+ .. ..++|+|+++|+
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~---~~~~i~~t~g~~~al 104 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVD---ADNEILPVLGSREAL 104 (396)
T ss_dssp TCCCEECSCCSCCSCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCC---TTTSEEEESSHHHHH
T ss_pred CCCeEEeCCcCCCCCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC---CCCeEEEcCCcHHHH
Confidence 44445666655543 45788888888775 33334444567899999999999999965 21 13 589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (369)
.+++.++..+ |....+++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|+++.
T Consensus 105 ~~~~~~~~~~--------g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 176 (396)
T 3jtx_A 105 FSFVQTVLNP--------VSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCS 176 (396)
T ss_dssp HHHHHHHCCC-----------CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEES
T ss_pred HHHHHHHhCC--------CCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEEC
Confidence 9998887541 10001268999999999999999999999999999766678999999999999999999999
Q ss_pred CCCCcccCCCH---HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-------c-CCCCcEEEEcCccC-
Q 017569 211 GSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-------R-LPLVKSINVSGHKY- 278 (369)
Q Consensus 211 ~~~~tG~~~~l---~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-------~-~~~~Dsi~~~~hK~- 278 (369)
|+||||.+.+. ++|+++|+++ ++++|+|++|+.+... ....... . ....+.+..+.+|.
T Consensus 177 p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (396)
T 3jtx_A 177 PNNPSGSVLDLDGWKEVFDLQDKY------GFIIASDECYSEIYFD---GNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS 247 (396)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHH------CCEEEEECTTTTCCST---TCCCCCHHHHHHHTTCCCTTEEEEEESTTTS
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCchHHhhhhhcccccCcEEEEecccccc
Confidence 99999999664 4599999999 9999999999875431 1011110 0 13567778889995
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHH
Q 017569 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFV 356 (369)
Q Consensus 279 l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L 356 (369)
+..+.+.|+++.. ++.. ..+.....+.. ++-+.....++..+++. .+.+.+. +..++.+++.+.|
T Consensus 248 ~~~G~r~G~~~~~-~~~~-~~~~~~~~~~~---------~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l 314 (396)
T 3jtx_A 248 NVPGLRSGFVAGD-AELL-KNFLLYRTYHG---------SAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPIL 314 (396)
T ss_dssp SCGGGCCEEEEEC-HHHH-HHHHHHHHHHT---------CCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEeC-HHHH-HHHHHHHhhcc---------cCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 5566788988763 2222 22211000100 12222222222233332 2345555 7778888888888
Q ss_pred Hhc
Q 017569 357 IHS 359 (369)
Q Consensus 357 ~~~ 359 (369)
++.
T Consensus 315 ~~~ 317 (396)
T 3jtx_A 315 QQV 317 (396)
T ss_dssp TTT
T ss_pred Hhc
Confidence 764
No 97
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.85 E-value=5.2e-20 Score=179.80 Aligned_cols=247 Identities=10% Similarity=-0.057 Sum_probs=174.0
Q ss_pred ChHHHHHHHHHHhccCCCCCC---CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.++.+.+++.++++.....+. ...+......++++++++++|.+. .+++++|++|+..++.++..+
T Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~-------~i~~~sGs~a~~~al~~l~~~---- 147 (427)
T 2w8t_A 79 FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTG-------AIVFSTGYMANLGIISTLAGK---- 147 (427)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHSCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCc-------eEEecCcHHHHHHHHHHhcCC----
Confidence 457788888877755211111 122344566677788999998863 678888899998887776331
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCcEEEEeeCCCCcccCCC
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (369)
++.|+++.++|.++..+++..|++++.+|. +|+++|++++++ ++++|+++.++|++|.+.|
T Consensus 148 ---------gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 148 ---------GEYVILDADSHASIYDGCQQGNAEIVRFRH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHHSCSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred ---------CCEEEECCcccHHHHHHHHHcCCeeEEeCC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 468999999999999999999998887763 489999999987 7899999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--ccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~ 298 (369)
+++|.++|+++ ++++|+|++|+.+..+....... +++ ..++|.+..++||+++ +.| |+++.++ +.. +
T Consensus 213 l~~l~~l~~~~------g~~li~Dea~~~~~~~~~g~~~~~~~~~-~~~~di~~~s~sK~~g-~~g-G~v~~~~-~l~-~ 281 (427)
T 2w8t_A 213 LKEMVAVAKKH------GAMVLVDEAHSMGFFGPNGRGVYEAQGL-EGQIDFVVGTFSKSVG-TVG-GFVVSNH-PKF-E 281 (427)
T ss_dssp HHHHHHHHHHT------TCEEEEECTTTTTTSSTTSCCHHHHTTC-TTCCSEEEEESSSTTC-SCC-EEEEECC-TTG-G
T ss_pred HHHHHHHHHHc------CCEEEEECCccccccCCCCCchHhhcCC-CcCCcEEEecchhhhc-cCC-CEEEeCH-HHH-H
Confidence 99999999999 99999999999866521000000 122 2368999999999986 555 8887753 333 2
Q ss_pred ccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 299 ELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 299 ~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+... ..|.. .++.+....+++..+|+.+.. +.++ +..++++++++.|++.|+
T Consensus 282 ~l~~~~~~~~~--------~~~~~~~~~aa~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~ 337 (427)
T 2w8t_A 282 AVRLACRPYIF--------TASLPPSVVATATTSIRKLMT--AHEKRERLWSNARALHGGLKAMGF 337 (427)
T ss_dssp GGGGTCHHHHS--------SCCCCHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcccccc--------cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 32211 11211 123333334555566666542 3333 888999999999998753
No 98
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.85 E-value=1.2e-20 Score=179.86 Aligned_cols=252 Identities=13% Similarity=0.007 Sum_probs=175.8
Q ss_pred cCCChHHHHHHHHHHhccCCC-------CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCC-eEEeCCchHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV-GVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~-~~~t~Ggt~a~~~al~~ 136 (369)
+.++++.+.+++.+++..... ....++...++.+++++++++++|++.+ .. .++|+||++|+..++.+
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~i~~t~g~t~a~~~~~~~ 87 (362)
T 2c0r_A 12 PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG----YKVLFIQGGASTQFAMIPMN 87 (362)
T ss_dssp SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS----EEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCC----cEEEEECCCchHHHHHHHHh
Confidence 556678889998888753211 0112455677888999999999999741 12 46778999999998888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHhhhcceeEEEeccC---CccccCHHHHHHHHhhcCcEEEEeeC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEE---GYYVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~---~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
+.++ +++|+++.+.|++ +...++..| +++.++++. .+..+|.++++ ++++|++|+++++
T Consensus 88 l~~~-------------gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~ 151 (362)
T 2c0r_A 88 FLKE-------------GQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSN 151 (362)
T ss_dssp HCCT-------------TCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESE
T ss_pred cCCC-------------CCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCC
Confidence 7432 4678877666655 345677789 999999862 22345766654 6778999999999
Q ss_pred CCCcccC-CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 212 STLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 212 ~~~tG~~-~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
+||||.+ .|+++| + ++++|+|++|+.+..+ .++. ..|.++.++|||+ +|.|+|++++
T Consensus 152 ~n~tG~~~~~l~~i------~------~~~vivD~a~~~~~~~-------~~~~--~~d~~~~s~~K~~-g~~G~G~l~~ 209 (362)
T 2c0r_A 152 ETIEGAQFKAFPDT------G------SVPLIGDMSSDILSRP-------FDLN--QFGLVYAGAQKNL-GPSGVTVVIV 209 (362)
T ss_dssp ETTTTEECSSCCCC------T------TSCEEEECTTTTTSSC-------CCGG--GCSEEEEETTTTT-CCSSCEEEEE
T ss_pred cCccceeccccccc------C------CCEEEEEChhhccCCc-------cchh--HCcEEEEeccccc-cCcCcEEEEE
Confidence 9999995 888887 7 9999999999865432 2222 2489999999999 5888999998
Q ss_pred eCCCCcccccccc-cCccCC--CCCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 291 RTKDDLPDELVFH-INYLGS--DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 291 ~~~~~~~~~~~~~-~~y~~~--~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
+++ .. ..+... +.+... ........+|.+.....++..+|+.+..+ |++++ +..++++++++.|++.|
T Consensus 210 ~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 210 RED-LV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp EGG-GS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred cHH-HH-hhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 753 22 121110 111100 00000122566666667778888877665 77777 89999999999999988
No 99
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.85 E-value=2.1e-20 Score=178.34 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=174.1
Q ss_pred ccccccccC-CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
++|....+. ++++.+.+++.+.+.. ....|. .++..+++ +++++++|.+. ...+++|+||++|+.+++.
T Consensus 33 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~l~----~~la~~~g~~~----~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 33 VKLDAMENPYRLPPALRSELAARLGEVALNRYP-VPSSEALR----AKLKEVMQVPA----GMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp EECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSC-CCCHHHHH----HHHHHHHTCCT----TCEEEEEEHHHHHHHHHHH
T ss_pred eEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCcHHHHH----HHHHHHhCCCC----cceEEEcCCHHHHHHHHHH
Confidence 344444433 3457888888887764 223332 23444554 45888889831 1358999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCC
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (369)
++..+ +++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||
T Consensus 104 ~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~np 169 (367)
T 3euc_A 104 AAARP-------------GAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD-FTLDRGAMLAAMAEHQPAIVYLAYPNNP 169 (367)
T ss_dssp HTCCT-------------TCEEEEEESCSCCSCHHHHTTTCEEEEEECCTT-SCCCHHHHHHHHHHHCCSEEEEESSCTT
T ss_pred HHcCC-------------CCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHHHhhccCCCEEEEcCCCCC
Confidence 76432 468999999999999999999999999999874 89999999999998 8999999999999
Q ss_pred cccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 215 tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
||.+.+ +++|+++|++++. |+++|+|++|+.+.. ......+.....+.+..+.+|++..+.+.|+++.+
T Consensus 170 tG~~~~~~~l~~i~~~~~~~~~----~~~li~De~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 241 (367)
T 3euc_A 170 TGNLFDAADMEAIVRAAQGSVC----RSLVVVDEAYQPFAQ----ESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGD 241 (367)
T ss_dssp TCCCCCHHHHHHHHHHTBTTSC----BCEEEEECTTCCSSS----CCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHhhhhcCC----CcEEEEeCcchhhcc----cchHHHHhhCCCEEEEecchhhcccccCceeeeeC
Confidence 999954 5566666665410 489999999986432 11111222334557777899996666778998874
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc-HhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+ +.. ..+... . .. ++.+ .+.++++...+. .+.+.++ +..++.+++.+.|++.+.+
T Consensus 242 ~-~~~-~~~~~~----~---~~----~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 299 (367)
T 3euc_A 242 P-QWL-EQLDKV----R---PP----YNVN---VLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGV 299 (367)
T ss_dssp H-HHH-HHHGGG----C---CS----SCCC---HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred H-HHH-HHHHHh----C---CC----CCCC---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2 222 121110 0 01 1222 233333333332 3445555 8889999999999987433
No 100
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.85 E-value=1.7e-20 Score=181.54 Aligned_cols=246 Identities=14% Similarity=0.026 Sum_probs=164.0
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (369)
+.+.+++.+.++.+ .+...+...+++ +.+++++|.+. .+++++|++|+..++.++ ..
T Consensus 44 ~~v~~a~~~~~~~~--~y~~~~~~~~l~----~~la~~~~~~~-------~v~~~~Gt~a~~~~l~~~~~~--------- 101 (399)
T 2oga_A 44 AETDAAIARVLDSG--RYLLGPELEGFE----AEFAAYCETDH-------AVGVNSGMDALQLALRGLGIG--------- 101 (399)
T ss_dssp HHHHHHHHHHHHHT--CCSSSHHHHHHH----HHHHHHTTSSE-------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHHhcC--CCCCchhHHHHH----HHHHHHHCCCe-------EEEecCHHHHHHHHHHHhCCC---------
Confidence 67788888777553 222334444454 45888888763 788899999999988876 22
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
.+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+ ++||+|.+.|+++|.++|
T Consensus 102 ----~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~ 174 (399)
T 2oga_A 102 ----PGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELA 174 (399)
T ss_dssp ----TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred ----CcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHH
Confidence 1468999999999999999999999999999865589999999999988887776 578999999999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeCCCCcccccccccCc
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDDLPDELVFHINY 306 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 306 (369)
+++ ++++|+|++|+.+.. .... .+. ...|.++.++| |++++|...|+++.++++.. ..+......
T Consensus 175 ~~~------~~~li~Dea~~~g~~--~~~~---~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~-~~l~~~~~~ 241 (399)
T 2oga_A 175 DRH------GLHIVEDAAQAHGAR--YRGR---RIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELA-ERLRMLRNY 241 (399)
T ss_dssp HHH------TCEECEECTTCTTCE--ETTE---ETT-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHH-HHHHHHHBT
T ss_pred HHc------CCEEEEECcccccCc--cCCe---ecc-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHH-HHHHHHHhc
Confidence 999 999999999986543 1111 111 12588888885 99865445677776544332 111110000
Q ss_pred cCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 307 LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 307 ~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
...........+.......+.+++++..+. .+.++ +..++++++++.|++.
T Consensus 242 g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~ 294 (399)
T 2oga_A 242 GSRQKYSHETKGTNSRLDEMQAAVLRIRLA--HLDSWNGRRSALAAEYLSGLAGL 294 (399)
T ss_dssp TCSSTTCCCSCCCBCCCCHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHTTTC
T ss_pred CccccccccccccCCCcCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccC
Confidence 000000000001111112344444433331 23333 7778899999999886
No 101
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.85 E-value=2.6e-20 Score=180.25 Aligned_cols=217 Identities=12% Similarity=0.023 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH--
Q 017569 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-- 171 (369)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~-- 171 (369)
.....++++++++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+
T Consensus 63 ~~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~~l~~~~~~-------------gd~vi~~~~~~~~~~~~~~~ 122 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGEA-------GLATASGISAITTTLLTLCQQ-------------GDHIVSASAIYGCTHAFLSH 122 (398)
T ss_dssp CHHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESSSCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHHHHHH
Confidence 4455677788999999863 677888899999998887432 468999999999887766
Q ss_pred --hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 172 --RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 172 --~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
+..|++++.+|++ |+++|++++++++++|++++++||+|.+.|+++|+++|+++ ++++|+|++|+.
T Consensus 123 ~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~De~~~~ 190 (398)
T 2rfv_A 123 SMPKFGINVRFVDAA------KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQ------GALLVVDNTFMS 190 (398)
T ss_dssp HHHHTTCEEEEECTT------SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHT------TCEEEEECTTTC
T ss_pred HHHHcCCEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCcc
Confidence 7779999888864 78999999999999999999999999999999999999999 999999999986
Q ss_pred ccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHH
Q 017569 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~ 327 (369)
+..+ . ... .++|.++.++||++++|.+ +|+++.+++ .+...+.. ..... . .++- ..+.
T Consensus 191 ~~~~--~---~~~---~~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~~-~~~~~---~----~~~~---~~~~ 250 (398)
T 2rfv_A 191 PYCQ--Q---PLQ---LGADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARFV-GLKDI---T----GGCM---SPFN 250 (398)
T ss_dssp TTTC--C---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHT-HHHHT---T----CCCC---CHHH
T ss_pred cccC--C---chh---hCCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHHH-HHHhC---C----CCCC---CHHH
Confidence 5431 1 112 2689999999999987766 588887642 22111110 00000 0 0111 2455
Q ss_pred HHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCc
Q 017569 328 QYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 328 ~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~ 363 (369)
+|+++..+.. .-..+ +..++++++++.|++.+.+.
T Consensus 251 ~~~~~~~l~~-~~~~~~~~~~~~~~l~~~l~~~~~v~ 286 (398)
T 2rfv_A 251 AWLTLRGVKT-LGIRMERHCENALKIARFLEGHPSIT 286 (398)
T ss_dssp HHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 5666665532 12223 67788999999998876443
No 102
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.85 E-value=8.9e-20 Score=173.70 Aligned_cols=258 Identities=17% Similarity=0.087 Sum_probs=175.2
Q ss_pred CccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHH
Q 017569 57 RLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (369)
Q Consensus 57 ~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (369)
.++|+...+. ++++.+.+++.+.+.....+ ..++..+ +++++++++|+++ ...++|+||++|+..++.
T Consensus 34 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y--~~~~~~~----lr~~la~~~~~~~-----~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 34 ITKLSSNENPLGTSKKVAAIQANSSVETEIY--PDGWASS----LRKEVADFYQLEE-----EELIFTAGVDELIELLTR 102 (363)
T ss_dssp CEECSSCSCTTCCCHHHHHHHHTCBSCCCBC------CHH----HHHHHHHHHTCCG-----GGEEEESSHHHHHHHHHH
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHHHhhcC--CCcchHH----HHHHHHHHhCCCh-----hhEEEeCCHHHHHHHHHH
Confidence 3455554433 34678888888776432222 2234444 4455888888765 358999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
++..+ +++|+++.++|.++...++..|++++.+|++++ +.+|+++|++++++++++|++++++|||
T Consensus 103 ~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~p~npt 168 (363)
T 3ffh_A 103 VLLDT-------------TTNTVMATPTFVQYRQNALIEGAEVREIPLLQD-GEHDLEGMLNAIDEKTTIVWICNPNNPT 168 (363)
T ss_dssp HHCST-------------TCEEEEEESSCHHHHHHHHHHTCEEEEEECCTT-SCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHccC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEecCCCC-CCcCHHHHHHhcccCCCEEEEeCCCCCc
Confidence 87432 468999999999999999999999999999874 8999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKD 294 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~ 294 (369)
|.+.|+++|.++++.+.+ ++++|+|++|+.+..+ -.+..........-+.+..+.+|+++ .+.+.|+++++ ++
T Consensus 169 G~~~~~~~l~~l~~~~~~----~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~ 242 (363)
T 3ffh_A 169 GNYIELADIQAFLDRVPS----DVLVVLDEAYIEYVTP-QPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KE 242 (363)
T ss_dssp CCCCCHHHHHHHHTTSCT----TSEEEEECTTGGGCSS-CCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HH
T ss_pred CCCcCHHHHHHHHHhCCC----CcEEEEeCchHhhcCc-cccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HH
Confidence 999999999999997632 8999999999965431 00000011112233456667889985 44556999873 22
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh-cHhhHHHH--HhhHHHHHHHHHHHh-cC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEVIPSF--CCVDHKKLSSFFVIH-SS 360 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l-g~~G~~~~--~~~~~a~~l~~~L~~-~g 360 (369)
.. +.+... . .. ++-+ .+.++++...+ ..+.++++ +..++.+++.+.|++ .|
T Consensus 243 ~~-~~l~~~----~---~~----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 297 (363)
T 3ffh_A 243 II-RQLNIV----R---PP----FNTT---SIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEK 297 (363)
T ss_dssp HH-HHHHHT----C---CS----CCCB---HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HH-HHHHHh----C---CC----CCCC---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 22 221110 0 01 1222 33333333333 22455555 788899999999988 44
No 103
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=2.5e-20 Score=193.88 Aligned_cols=226 Identities=14% Similarity=0.008 Sum_probs=167.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~ 177 (369)
.+.++.+++++|.+. ...+++|+++||..++.++..+ ++.|+++.+.|.++..++...|+.
T Consensus 208 ~~~ee~la~l~G~d~------~i~~~~Gtt~a~~~~i~al~~~-------------GD~Vlv~~~~h~s~~~~~~~~G~~ 268 (755)
T 2vyc_A 208 GESEKYAARVFGADR------SWSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLMLTGAK 268 (755)
T ss_dssp HHHHHHHHHHHTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHhCCCc------eEEECCcHHHHHHHHHHHhcCC-------------CCEEEECCCchHHHHHHHHHcCCE
Confidence 456677999999874 2567788889999988887542 479999999999999999999999
Q ss_pred eEEEeccCCc----ccc-----CHHHHHHHHhh--cCc--------EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC
Q 017569 178 LKEVKLEEGY----YVM-----NPVKAVELVDE--NTI--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (369)
Q Consensus 178 v~~v~~~~~~----~~~-----d~~~L~~~i~~--~~~--------~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~ 238 (369)
+++++++.++ +.+ |+++|++++++ +++ ++++++| |++|.+.|+++|+++|+++ +
T Consensus 269 ~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~------~ 341 (755)
T 2vyc_A 269 PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKT------S 341 (755)
T ss_dssp EEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTT------C
T ss_pred EEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHc------C
Confidence 9999886432 235 99999999976 343 8888887 6899999999999999999 9
Q ss_pred ceEEeecccccccccccCCCc--cccccCCC--CcE------EEEcCccCCCCCCCeEEEEEeCCC-Ccc-cccccccCc
Q 017569 239 TPIHVDAASGGFIAPFLYPDL--EWDFRLPL--VKS------INVSGHKYGLVYAGVGWVVWRTKD-DLP-DELVFHINY 306 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~--~Ds------i~~~~hK~l~~p~g~g~l~~~~~~-~~~-~~~~~~~~y 306 (369)
+++|+|+||+++.. +.+.. ... ..+ +|. ++.|+||++.+|.++|++++++.. .+. ..+......
T Consensus 342 ~~livDeA~~~~~~--~~~~~~~~~~--~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~ 417 (755)
T 2vyc_A 342 DRLHFDEAWYGYAR--FNPIYADHYA--MRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_dssp SEEEEECTTCTTGG--GCGGGTTSSS--SCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHH
T ss_pred CEEEEECcCchhcc--cCcccCCcch--hcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHH
Confidence 99999999986432 12211 011 134 676 899999999999889999988751 111 111111111
Q ss_pred cCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 307 LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 307 ~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. .+|.+....+++.++++.+..+|..++ +..+++++++++|++++.
T Consensus 418 ~~--------s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 418 HA--------TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp TS--------CSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hC--------CCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11 135555667788888888877744444 999999999999998643
No 104
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.85 E-value=4.9e-20 Score=176.83 Aligned_cols=248 Identities=11% Similarity=-0.060 Sum_probs=167.2
Q ss_pred ChHHHHHHHHHHhccCCC-C-CCCCc-chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYV-D-MDEYP-VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~-~-~~~~~-~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
+++.+.+++.+.++.... . ...++ +......++++.+++++|.+. .+++++|++|+..++.++.++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGt~a~~~~~~~~~~~---- 122 (384)
T 1bs0_A 54 HHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSR-------ALLFISGFAANQAVIAAMMAK---- 122 (384)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhCCC----
Confidence 457788888877754111 1 01111 223444566677888888863 677777799999988776331
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc---CcEEEEeeCCCCcccCCCH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~l 221 (369)
++.|+++.++|.++..+++..|++++.+|. +|+++|++++++. +++|++++++||+|.+.|+
T Consensus 123 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l 187 (384)
T 1bs0_A 123 ---------EDRIAADRLSHASLLEAASLSPSQLRRFAH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPL 187 (384)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHTSSSEEEEECT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCH
T ss_pred ---------CcEEEEcccccHHHHHHHHHcCCCEEEeCC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCH
Confidence 468999999999999999999999988874 3789999999763 7888899999999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 301 (369)
++|.++|+++ ++++|+|++|+.+..+.........+. ...|.++.++||+++ |.| |+++.++ +.. +.+.
T Consensus 188 ~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~-~~l~ 256 (384)
T 1bs0_A 188 AEIQQVTQQH------NGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFG-VSG-AAVLCSS-TVA-DYLL 256 (384)
T ss_dssp HHHHHHHHHT------TCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTS-SCC-EEEEECH-HHH-HHHH
T ss_pred HHHHHHHHHc------CcEEEEECCcccceecCCCCchHHhcC-CCCcEEEeeccchhh-ccC-cEEEeCH-HHH-HHHH
Confidence 9999999999 999999999976543100000011111 357888889999986 666 8888753 222 2221
Q ss_pred cc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 302 FH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 302 ~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ..|... ++.+.....++..+++.+....++++ +..++++++.+.|++.|
T Consensus 257 ~~~~~~~~~--------~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 257 QFARHLIYS--------TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp HHCHHHHSS--------BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HhchhhhcC--------CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 11 112111 12223333444556665532134444 88899999999999876
No 105
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.85 E-value=2.2e-20 Score=180.42 Aligned_cols=278 Identities=14% Similarity=0.044 Sum_probs=182.4
Q ss_pred HHHHHHHHHhhhhcCCCCccccccccCCChHHHHHHHHHHhcc-CCCCCCC------CcchHHHHHHHHHHHHHHhCCCC
Q 017569 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINK-NYVDMDE------YPVTTELQNRCVNMIAHLFNTPV 112 (369)
Q Consensus 40 ~~i~~~l~~~~~~~~~p~~~l~~~~~~~~~~~v~~~~~~~~~~-n~~~~~~------~~~~~~le~~~~~~la~l~g~~~ 112 (369)
.++++.+.+...... ..+++....+.. ++.+.+++.+.+.. ....+.. .+....+|+.+++++++++|.++
T Consensus 9 ~~i~~~~~~~~~~~~-~~i~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~ 86 (407)
T 2dkj_A 9 EALFELIALEEKRQR-EGLELIASENFV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW 86 (407)
T ss_dssp HHHHHHHHHHHHHHH-TSEECCTTCCCC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhh-cceeeccCCCCC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 445555555443321 223333333322 67888888888754 2211111 11223566667789999999874
Q ss_pred CCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---HHHHhhhcceeEEEec--cCCc
Q 017569 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW---EKFARYFEVELKEVKL--EEGY 187 (369)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~---~~~~~~~G~~v~~v~~--~~~~ 187 (369)
..+++++|++|+..++.++..+ +++|+++.++|.++ ..+++..|..++.+++ ++++
T Consensus 87 ------~~i~~~sGt~a~~~~~~~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 147 (407)
T 2dkj_A 87 ------ANVQPHSGSQANMAVYMALMEP-------------GDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDT 147 (407)
T ss_dssp ------EECCCSSHHHHHHHHHHHHCCT-------------TCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTT
T ss_pred ------ceEEecchHHHHHHHHHHhcCC-------------CCEEEEecccccCccchHHHHHhcCceEEEEecCCCccc
Confidence 1245556678999888887431 46899999999887 4566677875555555 4335
Q ss_pred cccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCC
Q 017569 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (369)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (369)
+.+|+++|++++++ ++++|+++.|+|+ .+.|+++|.++|+++ ++++|+|++|+.+..+ .+..... ..
T Consensus 148 ~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~~--~~~~~~~--~~ 215 (407)
T 2dkj_A 148 ELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEV------GAYLVVDMAHFAGLVA--AGLHPNP--LP 215 (407)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHH------TCEEEEECTTTHHHHH--TTCSCCC--TT
T ss_pred CccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHc------CCEEEEEccccccccc--cCccCCc--cc
Confidence 89999999999985 8999988788876 778999999999999 9999999999874431 1111111 12
Q ss_pred CCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--
Q 017569 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-- 343 (369)
Q Consensus 267 ~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-- 343 (369)
.+|.++.++||++.++.+ |++++++++.. ..+.... .+. .++.+.....++.+++..+..++++++
T Consensus 216 ~~di~~~s~sK~l~g~~~-G~~~~~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 284 (407)
T 2dkj_A 216 YAHVVTSTTHKTLRGPRG-GLILSNDPELG-KRIDKLIFPGI---------QGGPLEHVIAGKAVAFFEALQPEFKEYSR 284 (407)
T ss_dssp TCSEEEEESSGGGCCCSC-EEEEESCHHHH-HHHHHHHTTTT---------CSSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred cccEEEEeccccCCCCCc-eEEEECCHHHH-HHHHhhhcccc---------cCCCcHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 479999999999987776 89988643332 2221110 110 123333333455667776655677776
Q ss_pred HhhHHHHHHHHHHHhcCC
Q 017569 344 CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 344 ~~~~~a~~l~~~L~~~g~ 361 (369)
+..++++++.+.|++.|+
T Consensus 285 ~~~~~~~~l~~~L~~~g~ 302 (407)
T 2dkj_A 285 LVVENAKRLAEELARRGY 302 (407)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 889999999999998753
No 106
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.84 E-value=1.7e-20 Score=182.55 Aligned_cols=191 Identities=12% Similarity=0.101 Sum_probs=147.4
Q ss_pred hHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHH
Q 017569 69 EPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRK 146 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~ 146 (369)
++.+.+++.++++..... +....+..++.+++++.+++++|.+. .+++++|++|+.+++.++ ..
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-------~i~~~~gt~al~~~~~~~~~~------- 80 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPY-------CVPTTSGSTALMLALEALGIG------- 80 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHTTCC-------
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCC-------
Confidence 577888888887654322 33344555666777888999999873 688889999999998886 22
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~ 226 (369)
.+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|++ +|++|.+.|+++|.+
T Consensus 81 ------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~~~~i~~ 151 (418)
T 2c81_A 81 ------EGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIP---VHLFGSMANMDEINE 151 (418)
T ss_dssp ------TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCCHHHHHH
T ss_pred ------CcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEE---eCCcCCcccHHHHHH
Confidence 14689999999999999999999999999998655899999999999888887764 468999999999999
Q ss_pred HHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 227 l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
+|+++ ++++|+|++|+.+.. .... ... ....++++++++||+++++ ..|+++.+++
T Consensus 152 ~~~~~------~~~li~D~a~~~~~~--~~~~-~~~-~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~ 207 (418)
T 2c81_A 152 IAQEH------NLFVIEDCAQSHGSV--WNNQ-RAG-TIGDIGAFSCQQGKVLTAG-EGGIIVTKNP 207 (418)
T ss_dssp HHHHT------TCEEEEECTTCTTCE--ETTE-ETT-SSSSEEEEECCTTSSSCSS-SCEEEEESCH
T ss_pred HHHHC------CCEEEEECcccccCc--cCCE-ecc-cccceEEEeccCCcccCCC-CeEEEEECCH
Confidence 99999 999999999987652 1111 110 1223667777779999764 6677776543
No 107
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=7.1e-20 Score=177.42 Aligned_cols=252 Identities=11% Similarity=-0.006 Sum_probs=164.7
Q ss_pred ChHHHHHHHHHHhccCC-------CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNY-------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~-------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.++.+.+++.+.+.... ..+...+...++++.+++++++++|.+++ ...+ ++|++|+..++.++.++
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-----~i~~-~sGt~a~~~~~~~~~~~ 110 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA-----NVQP-NSGSQANQGVYAALINP 110 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-----ECCC-SSHHHHHHHHHHHHSCT
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc-----ceEe-ccHHHHHHHHHHHhcCC
Confidence 36778888887773321 11122245578888899999999999751 2344 45589999998887442
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHH---HHhhhcce--eEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCC
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVE--LKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTL 214 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~---~~~~~G~~--v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~ 214 (369)
+++|+++.++|.++.. .+...|.. ++.++++ +++.+|+++|+++++ +++++|+++.++|
T Consensus 111 -------------gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~- 175 (417)
T 3n0l_A 111 -------------GDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-LDGRIDYEKVREIAKKEKPKLIVCGASAY- 175 (417)
T ss_dssp -------------TCEEEEECC----------------CCSEEEEECCC-TTSSCCHHHHHHHHHHHCCSEEEECCSSC-
T ss_pred -------------CCEEEecccccccccchhhhhhhhcceeeeEeccCC-CCCCcCHHHHHHHHHhcCCeEEEECCccc-
Confidence 4799999999977554 33444444 4555566 458899999999998 6899998877774
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
|.+.|+++|.++|+++ ++++|+|+++..+.. ........ ...+|.++.++||++.+|.+ |+++.++++
T Consensus 176 -G~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~--~~~~~~~~--~~~~di~~~s~sK~l~g~~~-G~~~~~~~~ 243 (417)
T 3n0l_A 176 -ARVIDFAKFREIADEI------GAYLFADIAHIAGLV--VAGEHPSP--FPYAHVVSSTTHKTLRGPRG-GIIMTNDEE 243 (417)
T ss_dssp -CSCCCHHHHHHHHHHH------TCEEEEECTTTHHHH--HTTSSCCC--TTTCSEEEEESSTTTCSCSC-EEEEESCHH
T ss_pred -CccCCHHHHHHHHHHc------CCEEEEECccchhhh--hcccCCCc--cccceEEEeeCccccCCCCe-eEEEECCHH
Confidence 8999999999999999 999999999754433 11111111 23679999999999976664 888876433
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. ..+.. ..+. ...++.......++..++.....+++.++ +..++++++.+.|++.|+
T Consensus 244 ~~-~~~~~-~~~~-------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 303 (417)
T 3n0l_A 244 LA-KKINS-AIFP-------GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKF 303 (417)
T ss_dssp HH-HHHHH-HHTT-------TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HH-HHHhh-hhCC-------cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 32 12111 0000 01133334445566667776555676666 888999999999998664
No 108
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=5.8e-20 Score=178.91 Aligned_cols=214 Identities=12% Similarity=-0.009 Sum_probs=154.8
Q ss_pred Cccccccc---cC---CChHHHHHHHHHHhccC-CCCCCCCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEEeCCch
Q 017569 57 RLNLASFV---TT---WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVGTVGSS 127 (369)
Q Consensus 57 ~~~l~~~~---~~---~~~~~v~~~~~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~t~Ggt 127 (369)
.++|+.+. +. ++++.+.+++.++++.+ ...|....+..++++++.+++....+. +++ ...+++|+||+
T Consensus 51 ~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~---~~~i~~t~G~t 127 (420)
T 4f4e_A 51 KVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAG---RVVTAQALGGT 127 (420)
T ss_dssp CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT---CEEEEEEEHHH
T ss_pred cEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccC---ceEEEECCccH
Confidence 35666552 22 33478889888888663 344555668889999888777654442 221 01489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHh---hcC
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENT 203 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~---~~~ 203 (369)
+|+..++..+..- ..+++|+++.++|..+...++..|++++.+|+ +++++.+|+++|+++++ +++
T Consensus 128 ~al~~~~~~~~~~-----------~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 196 (420)
T 4f4e_A 128 GALKIGADFLRTL-----------NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGT 196 (420)
T ss_dssp HHHHHHHHHHHHH-----------CTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHHHh-----------CCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCC
Confidence 9999885433211 01468999999999999999999999999998 44458999999999998 578
Q ss_pred cEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cc-cCCCCcEEEEcCccC
Q 017569 204 ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DF-RLPLVKSINVSGHKY 278 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~-~~~~~Dsi~~~~hK~ 278 (369)
++++++.++||||.+ +++++|+++|+++ ++++++|++|+++....-.+.... .+ .....+.+..+.+|.
T Consensus 197 ~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 270 (420)
T 4f4e_A 197 IVVLHACCHNPTGVDLNDAQWAQVVEVVKAR------RLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKS 270 (420)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC------CcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCcc
Confidence 899999999999998 4577999999999 999999999987654100000000 11 123445667789999
Q ss_pred CC-CCCCeEEEEE
Q 017569 279 GL-VYAGVGWVVW 290 (369)
Q Consensus 279 l~-~p~g~g~l~~ 290 (369)
++ .+++.|++++
T Consensus 271 ~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 271 FSLYGERVGALSI 283 (420)
T ss_dssp TTCGGGCEEEEEE
T ss_pred CcCcCCCcEEEEE
Confidence 86 4667899875
No 109
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=3.9e-20 Score=180.43 Aligned_cols=262 Identities=14% Similarity=0.049 Sum_probs=180.2
Q ss_pred ccccccccC---CChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCCchHHH
Q 017569 58 LNLASFVTT---WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 58 ~~l~~~~~~---~~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~ 130 (369)
++|+.+.+. .+++.+.+++.++++.+ ...|....+..++++++.+++.+.+|.+ .+ ...+++|+||++|+
T Consensus 46 idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~---~~~v~~t~G~~~al 122 (425)
T 1vp4_A 46 ISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLD---EDNLIFTVGSQQAL 122 (425)
T ss_dssp EECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCC---GGGEEEEEHHHHHH
T ss_pred eeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCC---cccEEEeccHHHHH
Confidence 455554443 24577888888877653 2444444578899999999998877854 21 13589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh--------c
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------N 202 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--------~ 202 (369)
..++.++..+ +++|+++.++|..+...++..|++++.+|++++ + +|+++|++++++ +
T Consensus 123 ~~~~~~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~-~d~~~l~~~l~~~~~~~~~~~ 187 (425)
T 1vp4_A 123 DLIGKLFLDD-------------ESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-G-MDLNVLERKLSEFDKNGKIKQ 187 (425)
T ss_dssp HHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHhCCC-------------CCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-C-CCHHHHHHHHHhhhhcccCCC
Confidence 9988876432 468999999999999999999999999999864 4 999999999986 6
Q ss_pred CcEE-EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC-cc-ccccCCCCcEEEEcCc
Q 017569 203 TICV-AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDFRLPLVKSINVSGH 276 (369)
Q Consensus 203 ~~~v-~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~~~~~~Dsi~~~~h 276 (369)
+++| +++.++||||.+.+ +++|+++|+++ ++++++|++|+.+... ... .. ..+.....+.+..+++
T Consensus 188 ~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~i~~~s~s 259 (425)
T 1vp4_A 188 VKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY------DLFIVEDDPYGALRYE--GETVDPIFKIGGPERVVLLNTFS 259 (425)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECSSTTCBCS--SCCCCCHHHHHCTTTEEEEEEST
T ss_pred ceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEECCCccccCC--CCCCcCHHHhCCCCCEEEEeccc
Confidence 7887 57899999999865 67899999999 9999999999875431 110 01 1112224567778899
Q ss_pred cCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH----hhHHHH--HhhHHHH
Q 017569 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EVIPSF--CCVDHKK 350 (369)
Q Consensus 277 K~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~----~G~~~~--~~~~~a~ 350 (369)
|+++.+.++|++++++ +.. ..+...... .+ ++.+ .+.++++...+.. +.++++ +..++.+
T Consensus 260 K~~~~G~r~G~~~~~~-~~~-~~l~~~~~~-------~~--~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (425)
T 1vp4_A 260 KVLAPGLRIGMVAGSK-EFI-RKIVQAKQS-------AD--LCSP---AITHRLAARYLERYDLLEQLKPTIELYRRKRT 325 (425)
T ss_dssp TTTCGGGCEEEEECCH-HHH-HHHHHHHHH-------HH--SSCC---HHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHH
T ss_pred cccccccceEEEeeCH-HHH-HHHHHHhhh-------hc--CCCC---HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 9997445679998753 222 222110000 00 1111 3334444444422 334444 6678889
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
++.+.|++.
T Consensus 326 ~l~~~L~~~ 334 (425)
T 1vp4_A 326 VMLNALEEY 334 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999874
No 110
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.84 E-value=2.7e-20 Score=180.70 Aligned_cols=212 Identities=13% Similarity=0.009 Sum_probs=157.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHhh
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~~~ 173 (369)
+++++.+++++|.+. .++++||++|+..++.++.++ +++|+++.+.|.++.. .++.
T Consensus 65 ~~l~~~ia~~~g~~~-------~i~~~~g~~ai~~~~~~l~~~-------------gd~Vl~~~~~y~~~~~~~~~~~~~ 124 (404)
T 1e5e_A 65 SNLEGKIAFLEKTEA-------CVATSSGMGAIAATVLTILKA-------------GDHLISDECLYGCTHALFEHALTK 124 (404)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESCCCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCc-------EEEeCChHHHHHHHHHHHhCC-------------CCEEEEeCCCchhHHHHHHHHHHH
Confidence 355566888888863 788889999999988876432 4689999999999887 6778
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH-hhhccCCCceEEeecccccccc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~-~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
.|++++.+|++ |+++|+++++++|++|++++|+||+|.+.|+++|+++|++ + ++++++|++|+.+..
T Consensus 125 ~g~~~~~v~~~------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~------~~~li~De~~~~~~~ 192 (404)
T 1e5e_A 125 FGIQVDFINTA------IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQE------GVLVIADNTFCSPMI 192 (404)
T ss_dssp TTCEEEEECTT------STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTST------TCEEEEECTTTCTTT
T ss_pred cCCEEEEECCC------CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhc------CCEEEEECCCchhhh
Confidence 89999988875 6789999999999999999999999999999999999999 9 999999999997653
Q ss_pred cccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 253 ~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
.. +.. .++|.++.+++|++++|.+ +|+++.+++ .+...+....... ++ + ....+.+|+
T Consensus 193 --~~---~~~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~------~g--~---~~~~~~~~~ 252 (404)
T 1e5e_A 193 --TN---PVD---FGVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDI------TG--S---VISPHDAWL 252 (404)
T ss_dssp --CC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCC------CC--C---CCCHHHHHH
T ss_pred --CC---ccc---cCCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhC------CC--C---CCCHHHHHH
Confidence 11 122 2689999999999988766 598887643 2211221111111 00 0 112456677
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
++..+.. +..+ +..++++++.+.|++.+.++
T Consensus 253 ~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~~v~ 285 (404)
T 1e5e_A 253 ITRGLST--LNIRMKAESENAMKVAEYLKSHPAVE 285 (404)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHhHhH--HHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 7766643 3323 67889999999998887443
No 111
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.84 E-value=8.8e-20 Score=177.87 Aligned_cols=254 Identities=13% Similarity=0.033 Sum_probs=169.1
Q ss_pred ccccccCCC-hHHHHHHHHHHhccCCCCCCC-CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH
Q 017569 60 LASFVTTWM-EPECDKLVMASINKNYVDMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 60 l~~~~~~~~-~~~v~~~~~~~~~~n~~~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (369)
|..+.+... ++.+.+++.++++.+. |.. .++..+++++ +++++|.+. +++|+||++|+.+++.++
T Consensus 21 l~~~~p~~~~p~~~~~a~~~~~~~~~--y~~~~~~~~~l~~~----la~~~~~~~-------v~~~~ggt~al~~~l~~l 87 (424)
T 2po3_A 21 LLVGRPNRIDRARLYERLDRALDSQW--LSNGGPLVREFEER----VAGLAGVRH-------AVATCNATAGLQLLAHAA 87 (424)
T ss_dssp EETTCCCCCCHHHHHHHHHHHHHHTC--CSSSCHHHHHHHHH----HHHHHTSSE-------EEEESCHHHHHHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHHHHhcCC--cccCCHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHc
Confidence 444444433 4677888888876542 333 4555555555 777778753 899999999999998886
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCccc
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (369)
. . +++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+++ +++|.
T Consensus 88 ~-~-------------gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~ 150 (424)
T 2po3_A 88 G-L-------------TGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGR 150 (424)
T ss_dssp T-C-------------CSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGC
T ss_pred C-C-------------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEE---CCCCC
Confidence 3 1 36899999999999999999999999999986558999999999998888888865 48999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeCCCC
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~~~~ 295 (369)
+.++++|.++|+++ ++++|+|++|+.+.. ... ..+. ...|.++.+++ |++.+ ...|+++.++++.
T Consensus 151 ~~~l~~i~~la~~~------~~~li~Dea~~~g~~--~~~---~~~~-~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l 217 (424)
T 2po3_A 151 PCAADQLRKVADEH------GLRLYFDAAHALGCA--VDG---RPAG-SLGDAEVFSFHATKAVNA-FEGGAVVTDDADL 217 (424)
T ss_dssp CCCHHHHHHHHHHT------TCEEEEECTTCTTCE--ETT---EETT-SSSSEEEEECCTTSSSCC-SSCEEEEESCHHH
T ss_pred cCCHHHHHHHHHHc------CCEEEEECccccCCe--ECC---eecc-cccCEEEEeCCCCCCccC-CCCeEEEeCCHHH
Confidence 99999999999999 999999999984332 111 0111 12366666665 98755 6678887754333
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
. ..+.....+...........+.......+..+.++.. .++++++ +..++++++++.|++.
T Consensus 218 ~-~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (424)
T 2po3_A 218 A-ARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADL 280 (424)
T ss_dssp H-HHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred H-HHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2 1111100100000000000111111123444444433 2445555 7888999999999876
No 112
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=3.2e-21 Score=184.23 Aligned_cols=257 Identities=14% Similarity=0.009 Sum_probs=179.9
Q ss_pred ccccCCChHHHHHHHHHHhcc---CCCC----CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHH
Q 017569 62 SFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (369)
Q Consensus 62 ~~~~~~~~~~v~~~~~~~~~~---n~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~a 133 (369)
+-.|++.++.|.+++...+.+ |... .-.++...++.+++++.+++++|++.+ ..+++ |+|||+++.++
T Consensus 10 ~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~----~~v~f~t~~~T~a~n~~ 85 (361)
T 3m5u_A 10 SAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD----YEVLFLQGGASLQFAMI 85 (361)
T ss_dssp CSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT----EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCcHHHHHHHH
Confidence 334556678899998887643 2111 011335567778899999999999742 34777 99999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHHHhhhcceeEEEeccCCc-cccCHHHHHHHHhhcCcEEEEeeC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKFARYFEVELKEVKLEEGY-YVMNPVKAVELVDENTICVAAILG 211 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~-~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~-~~~d~~~L~~~i~~~~~~v~~~~~ 211 (369)
+..+. + | ++ ..|+.+..+|.. ...++..|++++.++++.+. +.++++. + |+++|++|.+++.
T Consensus 86 ~~~~~-~--------~---~~~~~i~~~~~~~~~-~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~~~~ 149 (361)
T 3m5u_A 86 PMNLA-L--------N---GVCEYANTGVWTKKA-IKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYICSN 149 (361)
T ss_dssp HHHHC-C--------S---SCEEEEECSHHHHHH-HHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEEESE
T ss_pred HHhcC-C--------C---CeEEEEeCCHHHHHH-HHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEEeCC
Confidence 88763 1 1 11 134444555543 34456679999999998753 1256665 3 8889999999999
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
+|.+|.+.|. +++ + ++++|||++++.+.. +++++ .+|.+++++|||+ +|.|.|++++|
T Consensus 150 e~~tG~~~~~-----i~~-~------~~~~~vD~~q~~g~~-------~id~~--~~d~~~~s~~K~~-gp~G~g~l~~~ 207 (361)
T 3m5u_A 150 NTIYGTQYQN-----YPK-T------KTPLIVDASSDFFSR-------KVDFS--NIALFYGGVQKNA-GISGLSCIFIR 207 (361)
T ss_dssp ETTTTEECSS-----CCC-C------SSCEEEECGGGTTSS-------CCCCT--TEEEEEEETTTTS-SCTTCEEEEEE
T ss_pred CCCcceeCCc-----ccc-c------CCEEEEEcccccCCC-------CCCcc--cCCEEEEechhcc-CCCccEEEEEc
Confidence 9999998552 332 5 999999999987665 24443 5899999999999 69999999998
Q ss_pred CCCCccccccc--ccCccCCC--CCCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 292 TKDDLPDELVF--HINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 292 ~~~~~~~~~~~--~~~y~~~~--~~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
++.. +.+.. .+.+.... .......+|.+...++++..+++.+..+ |++.+ ++.+++++++++|+++|-+
T Consensus 208 ~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~ 283 (361)
T 3m5u_A 208 KDML--ERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGF 283 (361)
T ss_dssp HHHH--HHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HHHH--hhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 6421 11110 11121100 0011223788888889999999999888 89988 9999999999999999833
No 113
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.84 E-value=4.7e-20 Score=177.97 Aligned_cols=250 Identities=10% Similarity=0.011 Sum_probs=171.2
Q ss_pred hHHHHHHHHHHhccCC-CC------CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMASINKNY-VD------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~-~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
++.+.+++.+.+.... .. +...+...++++++++++++++|.+. ..+++++|++|+.+++.++..+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~------~~i~~~sGt~a~~~a~~~~~~~- 108 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEH------ANVQPHSGAQANMAVYFTVLEH- 108 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCCT-
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc------eEEEecCcHHHHHHHHHHhcCC-
Confidence 6888888888774321 11 11224567888889999999999874 1344455699999998887431
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHH-H--Hhhhcc--eeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCc
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEK-F--ARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLT 215 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~-~--~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~t 215 (369)
+++|+++.++|.++.. . +...|. .++.++++++++.+|+++|++++++ ++++|++ .+++ .
T Consensus 109 ------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~-~ 174 (405)
T 2vi8_A 109 ------------GDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAA-Y 174 (405)
T ss_dssp ------------TCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSS-C
T ss_pred ------------CCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCC-C
Confidence 4689999999987653 2 234454 6667776644589999999999987 8888776 3444 3
Q ss_pred ccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 216 G~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
|...++++|.++|+++ ++++|+|++|+.+..+. +..... +..+|.++.++||++++|.| |++++++ +.
T Consensus 175 ~~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~~~--~~~~~~--~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~ 242 (405)
T 2vi8_A 175 PRIIDFAKFREIADEV------GAYLMVDMAHIAGLVAA--GLHPNP--VPYAHFVTTTTHKTLRGPRG-GMILCQE-QF 242 (405)
T ss_dssp CSCCCHHHHHHHHHHH------TCEEEEECTTTHHHHHT--TSSCCS--TTTCSEEEEESSSTTCCCSC-EEEEECH-HH
T ss_pred CccCCHHHHHHHHHHc------CCEEEEEcccccccccc--CcCCCc--cccCCEEEEeccccCCCCCC-eEEEEcH-HH
Confidence 6777899999999999 99999999998544321 111111 23689999999999987888 9988752 22
Q ss_pred cccccccc-cCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 296 LPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 296 ~~~~~~~~-~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. +.+... ..+. .++.+....+++.+++..+..++++++ +..++++++.+.|++.|+
T Consensus 243 ~-~~l~~~~~~~~---------~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 301 (405)
T 2vi8_A 243 A-KQIDKAIFPGI---------QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGF 301 (405)
T ss_dssp H-HHHHHHHTTTT---------CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHhhhcccc---------cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 222111 0110 123333344555567776655677776 899999999999998753
No 114
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.84 E-value=6e-21 Score=187.75 Aligned_cols=219 Identities=11% Similarity=-0.038 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhc
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G 175 (369)
..+++++++++ +|.+. ..++|+|+++|+..++.++..+ +++|+++.++|.++..++...|
T Consensus 58 ~~~~~~~~la~-~g~~~------~v~~~~G~t~a~~~~~~a~~~~-------------gd~Vlv~~~~h~s~~~~~~~~G 117 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDYD------GYFLVNGTTSGILSVIQSFSQK-------------KGDILMARNVHKSVLHALDISQ 117 (446)
T ss_dssp HHHHHHHHHCS-CTTEE------EEEESSHHHHHHHHHHHTTTTS-------------SSCEEECTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-cCCCc------eEEEeCCHHHHHHHHHHHhcCC-------------CCEEEEecCccHHHHHHHHHcC
Confidence 34567777999 98862 3788999999999998887432 4789999999999999999999
Q ss_pred ceeEEEec--cCCc---cccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccc
Q 017569 176 VELKEVKL--EEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (369)
Q Consensus 176 ~~v~~v~~--~~~~---~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~ 250 (369)
+.+++++. +++. +.+|+++| +.+++++|+++. +|++|.+.|+++|+++|+++ ++|+|+|+||++
T Consensus 118 ~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~------~~~livDea~~~- 186 (446)
T 2x3l_A 118 QEGHFIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQL------NIPVLIDEAHGA- 186 (446)
T ss_dssp CCEEECEEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHT------TCCEEEECTTCT-
T ss_pred CeEEEEeCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhc------CCeEEEcchhhh-
Confidence 99999998 4321 57899888 567889999998 56699999999999999999 999999999997
Q ss_pred cccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
.+.|. +. +.+....++|+++.|+||+++++.|+|+++++++..-...+....... ..++.+....+++.+
T Consensus 187 ~~~f~-~~-~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~--------~~~s~~~~~~aal~~ 256 (446)
T 2x3l_A 187 HFGLQ-GF-PDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYF--------QTSSPSYLIMASLES 256 (446)
T ss_dssp TTTST-TS-CCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHH--------SCSSCCHHHHHHHHH
T ss_pred hhccC-CC-CCChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHH--------cCCCchHHHHHHHHH
Confidence 33222 22 223222368999999999998999999999976522101111100011 113455555667777
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHH
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFF 355 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~ 355 (369)
+++.+...|.+++ +..+++++++++
T Consensus 257 a~~~l~~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 257 AAQFYKTYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence 7887776666534 788888888876
No 115
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.84 E-value=6.2e-20 Score=176.57 Aligned_cols=246 Identities=13% Similarity=0.053 Sum_probs=166.8
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHh
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (369)
++.+.+++.+.++.... ...++..++++ .+++++|.+. +++|+||++|+.+++.++ ..
T Consensus 19 ~~~~~~a~~~~~~~~~~--~~~~~~~~l~~----~la~~~~~~~-------~~~~~~gt~al~~~~~~~~~~-------- 77 (393)
T 1mdo_A 19 GAEELAAVKTVLDSGWI--TTGPKNQELEA----AFCRLTGNQY-------AVAVSSATAGMHIALMALGIG-------- 77 (393)
T ss_dssp CHHHHHHHHHHHHHTCC--SSSHHHHHHHH----HHHHHHCCSE-------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred CHHHHHHHHHHHhcCCc--CCChHHHHHHH----HHHHHhCCCc-------EEEecChHHHHHHHHHHcCCC--------
Confidence 35667888887765432 23344555554 4788888763 899999999999998886 22
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHH
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l 227 (369)
.+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+++ +++|.+.|+++|.++
T Consensus 78 -----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l 149 (393)
T 1mdo_A 78 -----EGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYAL 149 (393)
T ss_dssp -----TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHH
T ss_pred -----CCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHH
Confidence 146899999999999999999999999999987558899999999998888887754 589999999999999
Q ss_pred HHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc--cCCCCCCCeEEEEEeCCCCccccccc--c
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDDLPDELVF--H 303 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~--~ 303 (369)
|+++ ++++|+|++|+.+..+ .. . .+.. .|.++.++| |++.++ ..|+++.++++.. +.+.. .
T Consensus 150 ~~~~------~~~li~D~a~~~g~~~--~~-~--~~~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~-~~l~~~~~ 214 (393)
T 1mdo_A 150 GERY------GIPVIEDAAHATGTSY--KG-R--HIGA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFA-DKLRSLKF 214 (393)
T ss_dssp HHHH------TCCBCEECTTCTTCEE--TT-E--ETTS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHH-HHHHHHTB
T ss_pred HHHc------CCeEEEECccccCCeE--CC-e--ecCC--CCeEEEeCCCCCccccc-cceEEEeCCHHHH-HHHHHHHh
Confidence 9999 9999999999864431 11 0 1111 799999999 999654 5677777543332 11111 0
Q ss_pred cCccCCC--------CCCcc--ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 304 INYLGSD--------QPTFT--LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 304 ~~y~~~~--------~~~~~--l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+.... ...+. ..|+......+...+++..+ +++++. +..++++++++.|.+.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 215 HGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL--QKLDALNARRAAIAAQYHQAMADLP 281 (393)
T ss_dssp TTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred cCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0000000 00000 01221111233333333333 345555 77789999999999987
No 116
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.84 E-value=8.3e-20 Score=177.05 Aligned_cols=248 Identities=8% Similarity=-0.120 Sum_probs=170.2
Q ss_pred ChHHHHHHHHHHhccCCC---CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
.+|.+.+++.+.++.... .+....+..++..++++++++++|.+. .+++++|++|+..++.++..+
T Consensus 74 ~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGt~a~~~~l~~~~~~---- 142 (409)
T 3kki_A 74 NHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE-------CLLSQSGWNANVGLLQTICQP---- 142 (409)
T ss_dssp TCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe-------EEEecchHHHHHHHHHHhcCC----
Confidence 357788888888765221 111122333445567777999999874 577778899999888876442
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHH
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
++.|+++.++|.++..+++..|++++.++. +|+++|++++++ ++++|+++.++||+|.+.|+++
T Consensus 143 ---------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~ 207 (409)
T 3kki_A 143 ---------NTNVYIDFFAHMSLWEGARYANAQAHPFMH------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAE 207 (409)
T ss_dssp ---------TCEEEEETTSCHHHHHHHHHTTCEEEEECT------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHH
T ss_pred ---------CCEEEECCCcCHHHHHHHHHcCCeEEEecC------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHH
Confidence 579999999999999999999998877653 579999999986 5899999999999999999999
Q ss_pred HHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccc
Q 017569 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (369)
Q Consensus 224 I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 302 (369)
|.++|+++ ++++++|++|+.+.+..........+. ...+|.++.+.+|+++++ .|+++.++ +.. ..+..
T Consensus 208 l~~la~~~------~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~-~~~-~~~~~ 277 (409)
T 3kki_A 208 LVNISKEF------GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNN-EVN-RCVPF 277 (409)
T ss_dssp HHHHHHHH------TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESS-SGG-GTHHH
T ss_pred HHHHHHHc------CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECH-HHH-HHHHH
Confidence 99999999 999999999987544211110001111 135789999999999766 37776643 332 22211
Q ss_pred -ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 303 -HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 303 -~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
...+.. .++.+....+++.++++.+... .++ +..++.+++.+.|++.|+
T Consensus 278 ~~~~~~~--------~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~ 329 (409)
T 3kki_A 278 ISYPAIF--------SSTLLPYEAAGLETTLEIIESA--DNRRQHLDRMARKLRIGLSQLGL 329 (409)
T ss_dssp HCHHHHH--------SBCCCHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hCcCccc--------cCCCcHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence 111111 1122222344555566655332 233 788899999999998864
No 117
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.84 E-value=1.3e-19 Score=174.47 Aligned_cols=257 Identities=11% Similarity=0.026 Sum_probs=166.4
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..++.+.+++.+++.... +...+...++|++ +++++|.+. .+++++|++|+.+++.+++...
T Consensus 12 ~~~~~~~~a~~~~~~~~~--~~~~~~~~~l~~~----la~~~~~~~-------~i~~~sGt~a~~~al~~~~~~~----- 73 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSKM--FTMGEYVKQYETQ----FAKTFGSKY-------AVMVSSGSTANLLMIAALFFTK----- 73 (390)
T ss_dssp CCCHHHHHHHHHHHHHTC--CSSCHHHHHHHHH----HHHHHTCSE-------EEEESCHHHHHHHHHHHTTSSS-----
T ss_pred CCCHHHHHHHHHHHHcCC--CCCChHHHHHHHH----HHHHHCCCc-------EEEECCHHHHHHHHHHHHHhhh-----
Confidence 445777788888776532 2334455555554 788888863 7899999999999888762100
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~ 226 (369)
..+ -..+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+++ +++|.+.|+++|.+
T Consensus 74 ~~~-~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~g~~~~~~~i~~ 149 (390)
T 3b8x_A 74 KPR-LKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTV---NLLGNPNNFDEINK 149 (390)
T ss_dssp SCS-CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEE---CGGGCCCCHHHHHH
T ss_pred hcC-CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEE---CCccChhhHHHHHH
Confidence 000 01246899999999999999999999999999987568999999999999888888876 36788999999999
Q ss_pred HHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc--cc
Q 017569 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV--FH 303 (369)
Q Consensus 227 l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~--~~ 303 (369)
+|+++ ++++|+|++|+.+..+ .. .... ...+.+++..+.|.+.+|.| |+++.++++.. ..+. ..
T Consensus 150 l~~~~------~~~li~D~a~~~g~~~--~~---~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~-~~~~~~~~ 216 (390)
T 3b8x_A 150 IIGGR------DIILLEDNCESMGATF--NN---KCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIY-HILLCIRA 216 (390)
T ss_dssp HHTTS------CCEEEEECTTCTTCEE--TT---EETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHH-HHHHHHTB
T ss_pred HHHHc------CCEEEEECcCcccCEE--CC---cccccccceEEEEccCCCCCccCCc-eEEEeCCHHHH-HHHHHHHh
Confidence 99999 9999999999855431 11 1111 11223444333444455666 88887653321 1110 01
Q ss_pred cCccCC-----------------CCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 304 INYLGS-----------------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 304 ~~y~~~-----------------~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+... ....+...|.+.....+.+++++..+ +.+++. +..++++++.+.|++.+
T Consensus 217 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~~ 290 (390)
T 3b8x_A 217 HGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKDHP 290 (390)
T ss_dssp TTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 110000 00001111222223345555555544 445555 88899999999998864
No 118
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.84 E-value=1.9e-19 Score=179.61 Aligned_cols=200 Identities=11% Similarity=-0.038 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhcc----CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHH-HHHHHH
Q 017569 70 PECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQK 144 (369)
Q Consensus 70 ~~v~~~~~~~~~~----n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~ 144 (369)
+.+.+.+.+.+.. ....|....+..++++++.+++.+..|.+.+. ..+++|+|+++++.+++.++. .+
T Consensus 109 ~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~l~~~~---- 181 (500)
T 3tcm_A 109 ADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA---DDIFLTDGASPGVHLMMQLLIRNE---- 181 (500)
T ss_dssp HHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG---GGEEEESSSHHHHHHHHHHHCCST----
T ss_pred HHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc---ccEEEcCCHHHHHHHHHHHHcCCC----
Confidence 3344444555554 23455666788999999999999988866422 458999999999999988874 32
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhh------cCcEEEEeeCCCCccc
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~ 217 (369)
++.|+++.++|..+..+++..|+.++.++++++ ++.+|+++|++++++ ++++|++++|+||||.
T Consensus 182 ---------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~ 252 (500)
T 3tcm_A 182 ---------KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQ 252 (500)
T ss_dssp ---------TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCC
T ss_pred ---------CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcc
Confidence 478999999999999999999999999999763 579999999999987 7889999999999999
Q ss_pred CC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-----ccc--CCCCcEEE-EcCccCCC--CCCC
Q 017569 218 FE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-----DFR--LPLVKSIN-VSGHKYGL--VYAG 284 (369)
Q Consensus 218 ~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-----~~~--~~~~Dsi~-~~~hK~l~--~p~g 284 (369)
+- ++++|+++|+++ ++++++|++|+.+.+.--.+...+ ++. ......++ .+++|.++ ...+
T Consensus 253 ~~s~~~l~~i~~la~~~------~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R 326 (500)
T 3tcm_A 253 VLAEENQYDIVKFCKNE------GLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKR 326 (500)
T ss_dssp CCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGC
T ss_pred cCCHHHHHHHHHHHHHc------CCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccc
Confidence 84 477788889999 999999999987554100011110 110 11233444 47899873 3566
Q ss_pred eEEEEEe
Q 017569 285 VGWVVWR 291 (369)
Q Consensus 285 ~g~l~~~ 291 (369)
.|++++.
T Consensus 327 ~G~~~~~ 333 (500)
T 3tcm_A 327 GGYFEIT 333 (500)
T ss_dssp CEEEEEE
T ss_pred eEEEEEe
Confidence 7999874
No 119
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.84 E-value=7.2e-20 Score=175.13 Aligned_cols=244 Identities=11% Similarity=0.057 Sum_probs=169.3
Q ss_pred HHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHh-CCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 017569 75 LVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF-NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (369)
Q Consensus 75 ~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~-g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 153 (369)
.+.+.+......|...++..+++++ +++++ +.++ ..+++|+||++|+..++.++..+
T Consensus 47 ~~~~~~~~~~~~y~~~~g~~~l~~~----la~~~~~~~~-----~~v~~~~g~~~a~~~~~~~l~~~------------- 104 (375)
T 3op7_A 47 DFYKKLQGTKLNYGWIEGSPAFKKS----VSQLYTGVKP-----EQILQTNGATGANLLVLYSLIEP------------- 104 (375)
T ss_dssp HHHHHHHTSCCSSCCTTCCHHHHHH----HHTTSSSCCG-----GGEEEESHHHHHHHHHHHHHCCT-------------
T ss_pred HHHHHHhcCCcCCCCCCChHHHHHH----HHHHhccCCh-----hhEEEcCChHHHHHHHHHHhcCC-------------
Confidence 4445555555666666777888877 55554 3443 35899999999999999887442
Q ss_pred CCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHH
Q 017569 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLT 229 (369)
Q Consensus 154 ~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~ 229 (369)
+++|+++.++|.++...++..|++++.+|++. +++.+|+++|++++++++++|+++.++||+|.+.| +++|.++|+
T Consensus 105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~ 184 (375)
T 3op7_A 105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIAS 184 (375)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999873 45789999999999999999999999999999988 999999999
Q ss_pred HhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccC
Q 017569 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLG 308 (369)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~ 308 (369)
++ ++++++|++|+.+... +. .........+.+..+.+|.++ .+.+.|+++. +++.. +.+.....+.
T Consensus 185 ~~------~~~li~De~~~~~~~~---~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~-~~~~~~~~~~- 251 (375)
T 3op7_A 185 EV------GAYILSDEVYRSFSEL---DV-PSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVT-DILRDYRDYT- 251 (375)
T ss_dssp TT------TCEEEEECCSCCCSSS---CC-CCHHHHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHH-HHHTTTGGGT-
T ss_pred Hc------CCEEEEEccccccccc---CC-CchhhhcCCEEEEeEChhhcCCcccceEEEEe-CHHHH-HHHHHHHhhh-
Confidence 99 9999999999875431 11 111112244566778999986 4466788887 33222 2221111110
Q ss_pred CCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 309 SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 309 ~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
. .+.+......+..+++.. .+.++++ +..++++++.+.|++.+.+
T Consensus 252 ----~----~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 252 ----M----ICAGVFDDLVAQLALAHY-QEILERNRHILEENLAILDQWIEEEPLV 298 (375)
T ss_dssp ----T----SCCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred ----c----cCCCcHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 0 111222223333334322 2334444 6688899999999886543
No 120
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.84 E-value=1.3e-19 Score=172.11 Aligned_cols=252 Identities=14% Similarity=0.001 Sum_probs=173.1
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+...+. ++++.+.+++.+.+.....+ ..++..+++ +++++++|+++ ...++|+||++|+..++.+
T Consensus 29 idl~~~~~~~~~~~~v~~a~~~~~~~~~~y--~~~~~~~l~----~~la~~~~~~~-----~~i~~~~g~t~al~~~~~~ 97 (361)
T 3ftb_A 29 LDYSSNINPLGIPKSFLNNIDEGIKNLGVY--PDVNYRRLN----KSIENYLKLKD-----IGIVLGNGASEIIELSISL 97 (361)
T ss_dssp EETTCCCCTTCSCHHHHTTHHHHHHGGGSC--CCTTCHHHH----HHHHHHHTCCS-----CEEEEESSHHHHHHHHHTT
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhcCC--CCccHHHHH----HHHHHHhCCCc-----ceEEEcCCHHHHHHHHHHH
Confidence 444444332 34577888888777653222 224444554 45778888765 2489999999999888776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (369)
+ ++|+++.++|..+...++..|++++.+|++++ +.+++++|++++++ +++|+++.|+||||
T Consensus 98 ~-----------------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~l~~-~~~v~i~~p~nptG 158 (361)
T 3ftb_A 98 F-----------------EKILIIVPSYAEYEINAKKHGVSVVFSYLDEN-MCIDYEDIISKIDD-VDSVIIGNPNNPNG 158 (361)
T ss_dssp C-----------------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTT-SCCCHHHHHHHTTT-CSEEEEETTBTTTT
T ss_pred c-----------------CcEEEecCChHHHHHHHHHcCCeEEEeecCcc-cCCCHHHHHHhccC-CCEEEEeCCCCCCC
Confidence 4 37999999999999999999999999999864 57888999999988 99999999999999
Q ss_pred cCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 217 EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 217 ~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
.+.| +++|+++|+++ ++++|+|++|+.+... .+...... .......+..+.+|.++ .+.+.|++++.
T Consensus 159 ~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~ 230 (361)
T 3ftb_A 159 GLINKEKFIHVLKLAEEK------KKTIIIDEAFIEFTGD--PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITN 230 (361)
T ss_dssp BCCCHHHHHHHHHHHHHH------TCEEEEECSSGGGTCC--TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEES
T ss_pred CCCCHHHHHHHHHHhhhc------CCEEEEECcchhhcCC--cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeC
Confidence 9865 77788888899 9999999999876542 11111111 12233455668999986 45677888755
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc-HhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
+++.. ..+.... .. ++.+ .+.++++...+. .+.+.++ +..++.+++++.|++.+.+
T Consensus 231 ~~~~~-~~~~~~~-------~~----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 289 (361)
T 3ftb_A 231 NKEIA-AKIKAKQ-------NP----WNIN---CFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFI 289 (361)
T ss_dssp CHHHH-HHHHTTS-------CT----TCSC---HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSE
T ss_pred CHHHH-HHHHhhC-------CC----CCCC---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 54332 2211100 01 1222 344444444443 3455555 7889999999999987544
No 121
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.84 E-value=5.6e-20 Score=177.46 Aligned_cols=256 Identities=13% Similarity=0.021 Sum_probs=170.5
Q ss_pred ccccccccCC--ChHHHHHHHHHHhccCCCCCCCCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHH
Q 017569 58 LNLASFVTTW--MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (369)
Q Consensus 58 ~~l~~~~~~~--~~~~v~~~~~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (369)
++|.+..+.+ +++.+.+++.+.++.....+..+. +......++++.+++++|.+. .+++++|++|+..
T Consensus 48 id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGs~a~~~ 120 (401)
T 1fc4_A 48 INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMED-------AILYSSCFDANGG 120 (401)
T ss_dssp EECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHT
T ss_pred EEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCc-------EEEeCChHHHHHH
Confidence 3444443332 357788888877754221111111 113445566777888888862 5677778999988
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEE
Q 017569 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICV 206 (369)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v 206 (369)
++.++..+ ++.|+++.++|.++..+++..|++++.+|. +|+++|++++++ ++++|
T Consensus 121 ~~~~~~~~-------------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v 181 (401)
T 1fc4_A 121 LFETLLGA-------------EDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMQELEARLKEAREAGARHVLI 181 (401)
T ss_dssp THHHHCCT-------------TCEEEEETTCCHHHHHHHHTSCSEEEEECT------TCHHHHHHHHHHHHHTTCSSEEE
T ss_pred HHHHHcCC-------------CCEEEEcchhHHHHHHHHHHcCCceEEECC------CCHHHHHHHHHHhhccCCCceEE
Confidence 87776432 468999999999988899999999888763 378899998876 78999
Q ss_pred EEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc-cccccccCCCcc--ccccCCCCcEEEEcCccCCCCCC
Q 017569 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG-GFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYA 283 (369)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~-~~~~~~~~~~~~--~~~~~~~~Dsi~~~~hK~l~~p~ 283 (369)
+++.++||+|.+.|+++|.++|+++ ++++|+|++|+ ++..+ ...... .++ ..++|.++.++||+++++.
T Consensus 182 ~~~~~~nptG~~~~~~~i~~l~~~~------~~~li~De~~~~g~~~~-~g~~~~~~~~~-~~~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 182 ATDGVFSMDGVIANLKGVCDLADKY------DALVMVDDSHAVGFVGE-NGRGSHEYCDV-MGRVDIITGTLGKALGGAS 253 (401)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHT------TEEEEEECTTTTTTSST-TSCCHHHHTTC-TTCCSEEEEESSSTTCSSS
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHc------CCEEEEECcccccccCC-CCCccHHHcCC-CcCCcEEEecchhhccCCC
Confidence 9999999999999999999999999 99999999996 43211 000001 122 2367999999999996677
Q ss_pred CeEEEEEeCCCCccccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 284 GVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
| |+++.++ +.. +.+.. ...|. ..++.+.....++..+++.+.. ..++ +..++++++.+.|++.|
T Consensus 254 g-G~~~~~~-~~~-~~l~~~~~~~~--------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g 320 (401)
T 1fc4_A 254 G-GYTAARK-EVV-EWLRQRSRPYL--------FSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp C-EEEEECH-HHH-HHHHHHCHHHH--------HSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-EEEEcCH-HHH-HHHHHhCcCce--------eCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC
Confidence 6 8888743 222 22211 11111 0123333334444455555422 2333 88899999999999875
No 122
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.84 E-value=1.5e-19 Score=177.91 Aligned_cols=209 Identities=15% Similarity=0.052 Sum_probs=157.4
Q ss_pred ccccccccCC---ChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 58 LNLASFVTTW---MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 58 ~~l~~~~~~~---~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
++|+.+.|.+ +++.+.+++.+.++.. ...|....+..++++++.+++.+.+|.+ +. ..+++|+|+++|+.
T Consensus 79 i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~---~~v~~t~G~~~al~ 154 (448)
T 3aow_A 79 ISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD---NDIMITSGSQQALD 154 (448)
T ss_dssp EECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT---SEEEEESSHHHHHH
T ss_pred EeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch---hhEEEeCcHHHHHH
Confidence 4666655542 4567888888777543 2345555678999999999888888984 21 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----h--cCcE
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----E--NTIC 205 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~--~~~~ 205 (369)
.++.++.++ +++|+++.++|..+...++..|++++.+|++++ + +|+++|+++++ + ++++
T Consensus 155 ~~~~~l~~~-------------Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 155 LIGRVFLNP-------------GDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-G-MKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-C-CCHHHHHHHHhhhhccCCCCeE
Confidence 998887542 478999999999999999999999999999864 3 99999999998 5 6788
Q ss_pred E-EEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC
Q 017569 206 V-AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (369)
Q Consensus 206 v-~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~ 281 (369)
| +++.++||||.+.+ +++|+++|+++ ++++++|++|+.+...--....-..+...+.+....+.+|+++.
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~------~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~ 293 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEY------DFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAP 293 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCG
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccc
Confidence 7 46889999999865 67999999999 99999999998765310000000122222445667778999874
Q ss_pred CCCeEEEEEe
Q 017569 282 YAGVGWVVWR 291 (369)
Q Consensus 282 p~g~g~l~~~ 291 (369)
+..+|+++++
T Consensus 294 GlriG~v~~~ 303 (448)
T 3aow_A 294 GFRIGWMVGD 303 (448)
T ss_dssp GGCCEEEEEC
T ss_pred cccEEEEEeC
Confidence 4568999885
No 123
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.83 E-value=1.1e-19 Score=175.48 Aligned_cols=247 Identities=10% Similarity=0.011 Sum_probs=165.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (369)
+.+.+++.+++..+... ..++...+++ +.+++++|.+. +++|+||++|+.+++.++ ..
T Consensus 12 ~~v~~a~~~~~~~~~~~-~~g~~~~~l~----~~la~~~~~~~-------v~~~~ggt~al~~~~~~l~~~--------- 70 (394)
T 1o69_A 12 GNELKYIEEVFKSNYIA-PLGEFVNRFE----QSVKDYSKSEN-------ALALNSATAALHLALRVAGVK--------- 70 (394)
T ss_dssp CCHHHHHHHHHHHTTTS-CTTHHHHHHH----HHHHHHHCCSE-------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHHHcCCcc-CCChHHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 45667777776543211 1122244454 45788888753 899999999999998886 22
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
.+++|+++.++|.++..+++..|++++.+|+++ ++.+|+++|++++++ ++++|+++. ++|...|+++|.
T Consensus 71 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~ 142 (394)
T 1o69_A 71 ----QDDIVLASSFTFIASVAPICYLKAKPVFIDCDE-TYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIV 142 (394)
T ss_dssp ----TTCEEEEESSSCGGGTHHHHHTTCEEEEECBCT-TSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHH
T ss_pred ----CCCEEEECCCccHHHHHHHHHcCCEEEEEEeCC-CCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHH
Confidence 146899999999999999999999999999985 589999999999987 788888774 899999999999
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccC
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHIN 305 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 305 (369)
++|+++ ++++|+|++|+.+..+ . .. .. .....+|.++++.||.+ +|.+.|++++++++.. +.+.....
T Consensus 143 ~l~~~~------~~~li~Dea~~~g~~~-~-~~-~~-~~~~~~~~~s~s~~K~l-~~~~~G~~~~~~~~l~-~~l~~~~~ 210 (394)
T 1o69_A 143 EICKEN------DIVLIEDAAEALGSFY-K-NK-AL-GTFGEFGVYSYNGNKII-TTSGGGMLIGKNKEKI-EKARFYST 210 (394)
T ss_dssp HHHHHT------TCEEEEECTTCTTCEE-T-TE-ET-TSSSSEEEEECCTTSSS-CCSSCEEEEESCHHHH-HHHHHHTB
T ss_pred HHHHHc------CCEEEEECcCccccee-C-Cc-cc-ccccCcEEEEEeCCccC-CCCCceEEEECCHHHH-HHHHHHHH
Confidence 999999 9999999999843321 1 11 00 01236899999999977 5678999998654332 12211111
Q ss_pred cc--CCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 306 YL--GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 306 y~--~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+. .....+....|.+.....+...+++..+ +-+++. +..++++++++.|++.
T Consensus 211 ~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 211 QARENCLHYEHLDYGYNYRLSNVLGAIGVAQM--EVLEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp TCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hccccCccccccccCcccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccc
Confidence 11 0000011111222222233333333332 224444 8889999999999875
No 124
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.83 E-value=2.5e-19 Score=174.20 Aligned_cols=224 Identities=16% Similarity=0.027 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~ 171 (369)
..+++++++++++|.+. +++++||++|+..++.++.. .+++|+++.++|.++... +
T Consensus 57 ~~~~l~~~la~~~g~~~-------~~~~~~gt~a~~~al~~l~~-------------~gd~vi~~~~~~~~~~~~~~~~~ 116 (412)
T 2cb1_A 57 TAKALEERLKALEGALE-------AVVLASGQAATFAALLALLR-------------PGDEVVAAKGLFGQTIGLFGQVL 116 (412)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCC-------------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEeCCCchhHHHHHHHHH
Confidence 34456667999999863 89999999999999887632 146899999999876554 4
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
+..|++++.+|++ +++|++++++++++|++++++||+|.+.|+++|+++|+++ ++++|+|++|+.+.
T Consensus 117 ~~~g~~~~~~~~~-------~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~------~~~li~D~~~~~~~ 183 (412)
T 2cb1_A 117 SLMGVTVRYVDPE-------PEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEA------GVALVVDNTFGAAG 183 (412)
T ss_dssp TTTTCEEEEECSS-------HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECGGGTTT
T ss_pred HHcCCEEEEECCC-------HHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 5578888888753 8999999999999999999999999999999999999999 99999999998752
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEeCCCCccccc-ccccCc-cCC---------C----CCCcc
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDEL-VFHINY-LGS---------D----QPTFT 315 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~-~~~~~y-~~~---------~----~~~~~ 315 (369)
.. .. ... .++|.++.++||++++|.+ .|+++++++......+ ....+. .+. . ...++
T Consensus 184 ~~-~~---~~~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~ 256 (412)
T 2cb1_A 184 AL-CR---PLA---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLG 256 (412)
T ss_dssp TS-CC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHH
T ss_pred cc-CC---ccc---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHH
Confidence 10 11 111 3689999999999988776 6777776643210000 000000 000 0 00000
Q ss_pred --ccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCc
Q 017569 316 --LNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFY 363 (369)
Q Consensus 316 --l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~ 363 (369)
..|. ...+...|+.+..+ +.+... +..++++++.++|.+.+.+.
T Consensus 257 ~~~~g~--~~~~~~a~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~ 304 (412)
T 2cb1_A 257 LSLCGM--ALSPFNAYLLFQGL--ETVALRVARMSETARFLAERLQGHPKVK 304 (412)
T ss_dssp TTTTCC--CCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCS
T ss_pred HHhcCC--CCChHHhHHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 0111 11245555555544 334444 67789999999999875543
No 125
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.83 E-value=9e-20 Score=176.35 Aligned_cols=213 Identities=12% Similarity=-0.019 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----h
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----R 172 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~----~ 172 (369)
..++++.+++++|.+. .++++||++|+..++.++..+ +++|+++.+.|.++...+ +
T Consensus 68 ~~~l~~~la~~~g~~~-------~~~~~sGt~A~~~al~~~~~~-------------gd~Vi~~~~~y~~~~~~~~~~~~ 127 (392)
T 3qhx_A 68 RTALEAALAAVEDAAF-------GRAFSSGMAAADCALRAMLRP-------------GDHVVIPDDAYGGTFRLIDKVFT 127 (392)
T ss_dssp HHHHHHHHHHHTTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHHHHHHHHH
Confidence 3455666999999873 789999999999998876431 468999999998766555 6
Q ss_pred hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
..|++++.+|++ |+++|++++++++++|++..++||+|.+.|+++|+++|+++ ++++|+|++|+.+..
T Consensus 128 ~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------g~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 128 GWNVEYTPVALA------DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADS------SAKVLVDNTFASPAL 195 (392)
T ss_dssp GGTCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTCTTT
T ss_pred hcCcEEEEeCCC------CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 678888888864 78999999999999999999999999999999999999999 999999999985432
Q ss_pred cccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 253 ~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
.. +.. .++|.++.|+||+++++.+ .|+++.++++.. ..+....... +.. ...+.+|.
T Consensus 196 --~~---~~~---~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~-~~l~~~~~~~----------g~~--~~~~~~~~ 254 (392)
T 3qhx_A 196 --QQ---PLS---LGADVVLHSTTKYIGGHSDVVGGALVTNDEELD-QSFAFLQNGA----------GAV--PGPFDAYL 254 (392)
T ss_dssp --CC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHH-HHHHHHHHHH----------CCC--CCHHHHHH
T ss_pred --CC---hHH---hCCcEEEEcCccccCCCCCceEEEEEECcHHHH-HHHHHHHHhc----------CCC--CCHHHHHH
Confidence 11 112 2689999999999976643 788887653322 1111100000 111 12456666
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
.++.+.. +... +..+++++++++|++.+.+.+
T Consensus 255 ~~~~l~~--l~~~~~~~~~~~~~l~~~L~~~~~v~~ 288 (392)
T 3qhx_A 255 TMRGLKT--LVLRMQRHSENAAAVAEFLAEHPAIST 288 (392)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHhhhhH--HHHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 6665543 3333 788999999999998766543
No 126
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.83 E-value=4.9e-20 Score=178.36 Aligned_cols=215 Identities=13% Similarity=0.033 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---
Q 017569 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA--- 171 (369)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~--- 171 (369)
....++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.++...+
T Consensus 65 ~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~~l~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~ 124 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGEA-------GLALASGMGAITSTLWTLLRP-------------GDEVLLGNTLYGCTFAFLHHG 124 (398)
T ss_dssp HHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESSCCSHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhcC-------------CCEEEEeCCCchhHHHHHHHH
Confidence 344456666899999863 677788899999998887431 468999999999877665
Q ss_pred -hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccc
Q 017569 172 -RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (369)
Q Consensus 172 -~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~ 250 (369)
...|++++.++.+ |+++|++++++++++|+++.++||+|.+.|+++|+++|+++ ++++|+|++|+.+
T Consensus 125 ~~~~g~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~~~~~~ 192 (398)
T 1gc0_A 125 IGEFGVKLRHVDMA------DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKH------GATVVVDNTYCTP 192 (398)
T ss_dssp GGGGTCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGG------TCEEEEECTTTHH
T ss_pred HHHcCCEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHc------CCEEEEECCCccc
Confidence 6678888888753 78999999999999999999999999999999999999999 9999999999876
Q ss_pred cccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCc-cCCCCCCccccCCcchhHHHH
Q 017569 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINY-LGSDQPTFTLNFSKGSSQIIA 327 (369)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y-~~~~~~~~~l~~tr~~~~~l~ 327 (369)
..+ .+ .. .++|.++.++||++++|.+ .|+++.+++ .+...+.....+ .+ ++- ..+.
T Consensus 193 ~~~--~~---~~---~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~---------~~~---~~~~ 251 (398)
T 1gc0_A 193 YLQ--RP---LE---LGADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQGLKDMTG---------AVL---SPHD 251 (398)
T ss_dssp HHC--CG---GG---GTCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTHHHHHTC---------CCC---CHHH
T ss_pred ccC--Cc---hh---hCceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHHhhccCC---------CCC---CHHH
Confidence 541 11 11 2689999999999988775 588887542 221111110111 11 111 2455
Q ss_pred HHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 328 QYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 328 ~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
+|++++.+. .+..+ +..++++++++.|++.+.+.+
T Consensus 252 ~~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~v~~ 288 (398)
T 1gc0_A 252 AALLMRGIK--TLNLRMDRHCANAQVLAEFLARQPQVEL 288 (398)
T ss_dssp HHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHhccc--hHHHHHHHHHHHHHHHHHHHhcCCCeeE
Confidence 566555553 23333 788899999999998775543
No 127
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.83 E-value=1.3e-19 Score=177.17 Aligned_cols=275 Identities=11% Similarity=-0.042 Sum_probs=179.3
Q ss_pred cCCCC--ccccccccCCChHHHHHHHHHHhccCC------------CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 017569 53 DGNPR--LNLASFVTTWMEPECDKLVMASINKNY------------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (369)
Q Consensus 53 ~~~p~--~~l~~~~~~~~~~~v~~~~~~~~~~n~------------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (369)
.++|. ++|+........+.+.+++.+...... ..|....+..++++++.+++.+..|....- ...
T Consensus 34 ~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~-~~~ 112 (435)
T 3piu_A 34 VHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTF-DPN 112 (435)
T ss_dssp TTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCC-CGG
T ss_pred ccCCCCeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCC-CHH
Confidence 44554 344433333345666777766543221 223444577899999888888776622100 113
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh-hhcceeEEEeccC-CccccCHHHHH
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAV 196 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~ 196 (369)
.+++|+||++|+..++.+++++ ++.|+++.++|.++...+. ..|++++.+|+++ +++.+|+++|+
T Consensus 113 ~v~~~~gg~~a~~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 179 (435)
T 3piu_A 113 HLVLTAGATSANETFIFCLADP-------------GEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALE 179 (435)
T ss_dssp GEEEEEHHHHHHHHHHHHHCCT-------------TCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHH
T ss_pred HEEEcCChHHHHHHHHHHhcCC-------------CCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHH
Confidence 5899999999999999887542 4689999999999998888 7899999999875 23779999999
Q ss_pred HHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc--cccc-
Q 017569 197 ELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFR- 264 (369)
Q Consensus 197 ~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~- 264 (369)
+++++ ++++|+++.|+||||.+-+ +++|+++|+++ ++++++|++|+++.+. ..... ..+.
T Consensus 180 ~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~~--~~~~~~~~~~~~ 251 (435)
T 3piu_A 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK------GIHLISDEIYSGTAFS--SPSFISVMEVLK 251 (435)
T ss_dssp HHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCS--SSCCCCHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccccccccC--CCCCcCHHHhcc
Confidence 99987 7889999999999999844 68899999999 9999999999875431 11100 0111
Q ss_pred C---------CCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH
Q 017569 265 L---------PLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (369)
Q Consensus 265 ~---------~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~ 334 (369)
. .....+..+++|+++ .+.+.|+++.+++... ..+.....+. +-+......+...+..
T Consensus 252 ~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 252 DRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKMSSFG-----------LVSSQTQHLLSAMLSD 319 (435)
T ss_dssp C-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHHGGGS-----------CCCHHHHHHHHHHHHC
T ss_pred ccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHHhhcC-----------CCCHHHHHHHHHHhcC
Confidence 1 112266778999986 5567899988543222 1211111111 1111112222222332
Q ss_pred hc--HhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 335 LG--FEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 335 lg--~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. .+.+.+. +..++.+++++.|++.|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 350 (435)
T 3piu_A 320 KKLTKNYIAENHKRLKQRQKKLVSGLQKSGI 350 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 21 2233444 778889999999998763
No 128
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.83 E-value=1e-19 Score=175.78 Aligned_cols=215 Identities=15% Similarity=0.082 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----Hh
Q 017569 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----AR 172 (369)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~~ 172 (369)
..++++++++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.++... ++
T Consensus 61 ~~~l~~~la~~~g~~~-------~i~~~sG~~ai~~~~~~~~~~-------------gd~vl~~~~~y~~~~~~~~~~~~ 120 (389)
T 3acz_A 61 VEQFEEMVCSIEGAAG-------SAAFGSGMGAISSSTLAFLQK-------------GDHLIAGDTLYGCTVSLFTHWLP 120 (389)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHTTTCCT-------------TCEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHH
Confidence 3455566899998863 678888999998888776331 46899999999886655 57
Q ss_pred hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccc
Q 017569 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (369)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (369)
..|++++.+|. .|+++|++++++++++|+++.++||+|.+.|+++|+++|+++ ++++|+|++|+.+..
T Consensus 121 ~~g~~~~~v~~------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~------~~~livD~~~~~~~~ 188 (389)
T 3acz_A 121 RFGIEVDLIDT------SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHER------GARLVVDATFTSPCF 188 (389)
T ss_dssp HTTCEEEEECT------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTCTTT
T ss_pred HcCCEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 78999988886 278999999999999999999999999999999999999999 999999999986543
Q ss_pred cccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 253 ~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
.. +.+ .++|.++.++||++++|.+ .|+++.++.+.. ..+.......+. + ......|.
T Consensus 189 --~~---~~~---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~-~~l~~~~~~~g~---------~---~~~~~~~~ 247 (389)
T 3acz_A 189 --LK---PLE---LGADIALHSVSKYINGHGDVIGGVSSAKTAEDI-ATIKFYRKDAGS---------L---MAPMDAFL 247 (389)
T ss_dssp --CC---GGG---TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHH-HHHHHHHHHHCC---------C---CCHHHHHH
T ss_pred --cC---ccc---cCCeEEEECChhhccCCCCceeEEEEECcHHHH-HHHHHHHHhcCC---------C---CCHHHHHH
Confidence 11 122 3689999999999988877 688887642222 122111111111 1 12355666
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcccc
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
+++.+. .+... +..++++.+++.|++.+.+.+.+
T Consensus 248 ~~~~l~--~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~ 283 (389)
T 3acz_A 248 CARGMK--TLPIRMQIHMENGLKVAKFLEQHEKIVKVN 283 (389)
T ss_dssp HHHHHT--THHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHcCcc--HHHHHHHHHHHHHHHHHHHHHcCCCeeEEE
Confidence 666664 23332 77789999999999987665554
No 129
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.3e-19 Score=176.41 Aligned_cols=214 Identities=10% Similarity=-0.035 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh--
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY-- 173 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~-- 173 (369)
..+++++++++++|.+. .++++||++|+..++.++..+ ++.|+++.+.|..+...++.
T Consensus 82 ~~~~l~~~la~~~g~~~-------~~~~~sG~~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~ 141 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPA-------AFATASGMAAVFTSLGALLGA-------------GDRLVAARSLFGSCFVVCSEIL 141 (414)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCCT-------------TCEEEEESCCCHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCccchHHHHHHHHH
Confidence 44566677999999764 789999999998888876432 47899999999987766644
Q ss_pred --hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 174 --FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 174 --~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
.|++++.+|.+ |+++|+++++++|++|+++.++||+|.+.|+++|+++|+++ ++++++|++|+.+.
T Consensus 142 ~~~g~~~~~v~~~------d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~------g~~livDe~~~~~~ 209 (414)
T 3ndn_A 142 PRWGVQTVFVDGD------DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAA------GAKVVLDNVFATPL 209 (414)
T ss_dssp HHTTCEEEEECTT------CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTHHH
T ss_pred HHcCcEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 89999888865 78999999999999999999999999999999999999999 99999999998543
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
. ..+ . ..++|.++.+++|+++++.. .|+++.++. .+...+.......+ +. ......|
T Consensus 210 ~--~~~---~---~~g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~g----------~~--~~~~~a~ 268 (414)
T 3ndn_A 210 L--QQG---F---PLGVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHTG----------PA--MSAFNAW 268 (414)
T ss_dssp H--CCC---G---GGTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHHC----------CC--CCHHHHH
T ss_pred c--CCc---h---hcCCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHcC----------CC--CCHHHHH
Confidence 2 111 1 22689999999999965432 688877543 22111111011111 11 1245566
Q ss_pred HHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 330 YQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 330 ~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
.+++.+. .+..+ +..++++++++.|++.+.+++
T Consensus 269 ~~~~~l~--~l~~r~~~~~~~a~~l~~~L~~~p~v~~ 303 (414)
T 3ndn_A 269 VLLKGLE--TLAIRVQHSNASAQRIAEFLNGHPSVRW 303 (414)
T ss_dssp HHHHHGG--GHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEeE
Confidence 6666543 34333 888999999999998876543
No 130
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.83 E-value=3e-19 Score=170.71 Aligned_cols=265 Identities=13% Similarity=0.029 Sum_probs=178.6
Q ss_pred CCccccccccCC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 56 PRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 56 p~~~l~~~~~~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
..++|+...+.. .++.+.+++.+.+. ....|....+..++++++.+++++.+|.+.+ ....++|+||++++.+++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~---~~~i~~t~g~~~al~~~~ 99 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELK---ENELISTLGSREVLFNFP 99 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC---GGGEEEESSSHHHHHHHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---HHHEEECcCcHHHHHHHH
Confidence 445666555543 45778888887763 3333444456789999999999999998432 145899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.++..+ ..+++|+++.++|..+...++..|++++.+|++++ ..+++ +|++++.+++++|+++.|+||
T Consensus 100 ~~~~~~-----------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~-~l~~~~~~~~~~v~~~~p~np 166 (376)
T 3ezs_A 100 SFVLFD-----------YQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE-NDFTP-SLNEKELQEVDLVILNSPNNP 166 (376)
T ss_dssp HHHTTT-----------CSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGG-GTSCC-CCCHHHHHHCSEEEECSSCTT
T ss_pred HHHcCC-----------CCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCC-CCcch-hHHhhhccCCCEEEEcCCCCC
Confidence 887431 01368999999999999999999999999999764 24444 778888888999999999999
Q ss_pred cccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc------cCCCCcEEEEcCccCCC-CCCC
Q 017569 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF------RLPLVKSINVSGHKYGL-VYAG 284 (369)
Q Consensus 215 tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~------~~~~~Dsi~~~~hK~l~-~p~g 284 (369)
||.+.+ +++|+++|+++ ++++|+|++|+.+...- .+...... .....+.+..+.+|+++ .+.+
T Consensus 167 tG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 239 (376)
T 3ezs_A 167 TGRTLSLEELISWVKLALKH------DFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLR 239 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGC
T ss_pred cCCCCCHHHHHHHHHHHHHc------CcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccce
Confidence 999966 77788889999 99999999999755411 01000010 02356778888999984 5677
Q ss_pred eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHH
Q 017569 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVI 357 (369)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~ 357 (369)
.|+++.. ++.. ..+.....+. . ++-+.....++..+++. .+.++++ +..++.+++.+.|+
T Consensus 240 ~G~~~~~-~~~~-~~~~~~~~~~-----~----~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 240 SGFIAGD-SRLL-EKYKAFRAYL-----G----YTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp CEEEEEC-HHHH-HHHHHHHTTT-----C----CCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST
T ss_pred eEEEeeC-HHHH-HHHHHHHhhh-----c----CCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc
Confidence 8988763 2222 2221100000 0 12222222333333332 2234444 77778888888876
No 131
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.83 E-value=4e-20 Score=179.60 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=154.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEE---eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHHH----
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEK---- 169 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~-~~h~s~~~---- 169 (369)
+++.+.+++++|.+. .++ +++|++|+..++.++.++ +++|+++. +.|..+..
T Consensus 62 ~~Le~~lA~l~g~e~-------alv~p~~~sGt~Ai~~al~all~~-------------GD~Vl~~~~~~y~~~~~~~~~ 121 (409)
T 3jzl_A 62 DTLERVYATVFKTEA-------ALVRPQIISGTHAISTVLFGILRP-------------DDELLYITGQPYDTLEEIVGI 121 (409)
T ss_dssp HHHHHHHHHHHTCSE-------EEEETTSCSHHHHHHHHHHHHCCT-------------TCEEEECSSSCCTTHHHHHTS
T ss_pred HHHHHHHHHHhCCCc-------EEEECCCccHHHHHHHHHHHhcCC-------------CCEEEEeCCCCcHhHHHHHhc
Confidence 344455999999975 455 889999999988876442 47899988 88888774
Q ss_pred ------HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee----CCCCcccCCCHHHHHHHHHH--hhhccCC
Q 017569 170 ------FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEETGW 237 (369)
Q Consensus 170 ------~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~l~~I~~l~~~--~~~~~~~ 237 (369)
.++..|++++.+|++++ +.+|+++|+++++++|++|+++. ++|++|.+.|+++|+++|++ +
T Consensus 122 ~g~~~~~l~~~G~~~~~v~~~~~-g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~------ 194 (409)
T 3jzl_A 122 RKQGQGSLKDFHIGYSSVPLLEN-GDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINP------ 194 (409)
T ss_dssp SSSSSSCTGGGTCEEEECCCCTT-SCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT------
T ss_pred ccchhhHHHHcCCEEEEeCCCCC-CCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCC------
Confidence 44567999999998775 89999999999999999999999 99999999999999999999 8
Q ss_pred CceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCC--CeEEEEEeCCCCccccccc--ccCccCCCCCC
Q 017569 238 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVF--HINYLGSDQPT 313 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~--~~~y~~~~~~~ 313 (369)
++++|+|++|+.+... .+ +.. .++|.++.++||+++++. ..|+++.+ ++.. +.+.. ...+++...
T Consensus 195 ~~~livD~a~~~~~~~---~~-p~~---~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li-~~l~~~~~~~~~g~~~-- 263 (409)
T 3jzl_A 195 EVIVFVDNCYGEFVEY---QE-PPE---VGADIIAGSLIKNPGGGLAKTGGYIAGK-EALV-DLCGYRLTTPGIGREA-- 263 (409)
T ss_dssp TCEEEEECTTCTTTSS---CC-SGG---GTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHH-HHHHHHHSCTTTGGGC--
T ss_pred CCEEEEeCCccccccc---CC-ccc---cCCeEEEECccccCCccCCceEEEEEeC-HHHH-HHHHHHhccccccccc--
Confidence 9999999999865421 11 112 378999999999987653 24777764 3332 22211 111111100
Q ss_pred ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 314 FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 314 ~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.... ..|..++.+.. ...+ +..++|+++++.|+++|+
T Consensus 264 ----g~~~~----~~~~~l~gl~~--~~~r~~~~~~~a~~la~~L~~~g~ 303 (409)
T 3jzl_A 264 ----GASLY----SLLEMYQGFFL--APHVTAQAIKGARFTAAMLAEFGV 303 (409)
T ss_dssp ----CCCTT----CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----cccHH----HHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11111 12333443322 2223 889999999999999987
No 132
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.83 E-value=2.1e-20 Score=177.62 Aligned_cols=255 Identities=13% Similarity=0.031 Sum_probs=176.4
Q ss_pred CChHHHHHHHHHHhccC--C--CCCCC---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc-hHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKN--Y--VDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS-SEAIMLAGLAFK 138 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n--~--~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg-t~a~~~al~~~~ 138 (369)
++++.+.+++.+++... . ..+.. +++..++.+++++++++++|++. ...+++|+|+ ++|+..++.++.
T Consensus 13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~----~~~v~~~~g~gt~al~~~~~~l~ 88 (360)
T 1w23_A 13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPN----DYQILFLQGGASLQFTMLPMNLL 88 (360)
T ss_dssp CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCT----TEEEEEESSHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCC----CceEEEECCcchHHHHHHHHHhc
Confidence 55678888888887542 1 11112 45667788899999999999962 1248899998 999988887764
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHH-HHhhcCcEEEEeeCCCCccc
Q 017569 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGSTLTGE 217 (369)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~-~i~~~~~~v~~~~~~~~tG~ 217 (369)
.+ | ..++.|+++.++|+++. .++..| +++.+|++++++.+|+++|++ +++++|++|++++++||||.
T Consensus 89 ~~--------~--~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 89 TK--------G--TIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGT 156 (360)
T ss_dssp CT--------T--CEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred CC--------C--CcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcce
Confidence 31 1 11346888888887744 356779 999999975346689999999 88888999999999999999
Q ss_pred CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 218 ~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
+.| + +++++ ++++++|++|+.+..+ .++. ..|.++.++||+++ |.|+|+++++++ ..
T Consensus 157 ~~~--~---i~~~~------~~~li~D~a~~~~~~~-------~~~~--~~di~~~s~sK~~~-~~G~G~~~~~~~-~~- 213 (360)
T 1w23_A 157 QYQ--N---FPEIN------HAPLIADMSSDILSRP-------LKVN--QFGMIYAGAQKNLG-PSGVTVVIVKKD-LL- 213 (360)
T ss_dssp ECS--S---CCCCC------SSCEEEECTTTTTSSC-------CCGG--GCSEEEEETTTTTS-CTTCEEEEEEHH-HH-
T ss_pred ecc--c---ccccC------CceEEEechhhcCCCC-------cCcc--cCCEEEEEcccccC-CCCcEEEEEcHH-HH-
Confidence 855 2 33378 9999999999875432 1222 23889999999885 778999998753 21
Q ss_pred cccccccCc-cCCCC--CCccccCCcchhHHHHHHHHHHHhcHh-hHHHH--HhhHHHHHHHHHHHhcC
Q 017569 298 DELVFHINY-LGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE-VIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 298 ~~~~~~~~y-~~~~~--~~~~l~~tr~~~~~l~~~~~l~~lg~~-G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+.....+ ..... ......++.+....+++..+++.+..+ +++++ +..++++++.+.|++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 282 (360)
T 1w23_A 214 NTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESN 282 (360)
T ss_dssp CSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 111111111 10000 000111455555556677778777666 67776 89999999999999887
No 133
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.83 E-value=6.4e-20 Score=189.50 Aligned_cols=228 Identities=11% Similarity=-0.072 Sum_probs=165.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-Hhhhcc
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEV 176 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~-~~~~G~ 176 (369)
.++++.+++++|.+. ...+++|+++||..++.++..+ +++|+++.+.|.++..+ +++.|+
T Consensus 176 ~e~e~~lA~~~gae~------~i~v~nGtt~an~~ai~al~~p-------------GD~VLv~~~~H~S~~~~~~~l~Ga 236 (730)
T 1c4k_A 176 VAAEKHAARVYNADK------TYFVLGGSSNANNTVTSALVSN-------------GDLVLFDRNNHKSVYNSALAMAGG 236 (730)
T ss_dssp HHHHHHHHHHTTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHCCCc------EEEECCHHHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHHHHHHHCCC
Confidence 456667999999974 2567778889999988887542 47999999999999988 889999
Q ss_pred eeEEEeccCCc----cccCHHHH-----HHHHhhc------C----cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCC
Q 017569 177 ELKEVKLEEGY----YVMNPVKA-----VELVDEN------T----ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 177 ~v~~v~~~~~~----~~~d~~~L-----~~~i~~~------~----~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~ 237 (369)
.+++++.+.+. +.+|+++| +++|+++ + ++|++++| |++|.+.|+++|+++|+++
T Consensus 237 ~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~------ 309 (730)
T 1c4k_A 237 RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHL------ 309 (730)
T ss_dssp EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGG------
T ss_pred EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHc------
Confidence 99988875322 45788888 9998765 5 78889988 5899999999999999999
Q ss_pred CceEEeecccccccccccCCCc----cccccCCCCc----EEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCC
Q 017569 238 DTPIHVDAASGGFIAPFLYPDL----EWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (369)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~----~~~~~~~~~D----si~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~ 309 (369)
++++|+|+||+.+.. +.+.. ..+....++| +++.++||++.+|.++|+++++++.... ...+...
T Consensus 310 g~~livDeAh~~~~~--f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g-----~~~~i~~ 382 (730)
T 1c4k_A 310 CDYIEFDSAWVGYEQ--FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG-----QLRYCDH 382 (730)
T ss_dssp BSEEEEECTTCCGGG--SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTT-----STTCCCH
T ss_pred CCeEEEEcccccccc--cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcC-----cccccCH
Confidence 999999999986432 12211 1222223677 9999999999888888999888753211 0000000
Q ss_pred CC----CCccccCCcchhHHHHHHHHHHHhcH-hhHHHH-HhhHHHHHHHHHHHh
Q 017569 310 DQ----PTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF-CCVDHKKLSSFFVIH 358 (369)
Q Consensus 310 ~~----~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~-~~~~~a~~l~~~L~~ 358 (369)
.. ......+|.+....+++-+++..+.. .|...+ ++.+++++++++|++
T Consensus 383 ~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~ 437 (730)
T 1c4k_A 383 KHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIK 437 (730)
T ss_dssp HHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 00 00001145555556677778888876 455555 999999999999998
No 134
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.83 E-value=2.7e-19 Score=174.40 Aligned_cols=234 Identities=11% Similarity=-0.037 Sum_probs=163.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~ 170 (369)
.+..++++++.+++.+.+|.+..- ....+++|+|+++++..++.+++++ +++|+++.++|..+...
T Consensus 83 ~g~~~lr~~la~~~~~~~g~~~~~-~~~~i~~~~G~~~ai~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~ 148 (428)
T 1iay_A 83 HGLPEFRKAIAKFMEKTRGGRVRF-DPERVVMAGGATGANETIIFCLADP-------------GDAFLVPSPYYPAFNRD 148 (428)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCSCC-CTTSCEEEEHHHHHHHHHHHHHCCT-------------TCEEEEESSCCTTHHHH
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCC-ChhhEEEccChHHHHHHHHHHhCCC-------------CCeEEEccCCCcchHHH
Confidence 357899999999999888844100 1135899999999999998887542 46899999999998775
Q ss_pred H-hhhcceeEEEeccC-CccccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCc
Q 017569 171 A-RYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDT 239 (369)
Q Consensus 171 ~-~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~ 239 (369)
+ ...|++++.+|+++ +++.+|+++|++++++ ++++|+++.|+||||.+.| +++|+++|+++ ++
T Consensus 149 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~------~~ 222 (428)
T 1iay_A 149 LRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH------NI 222 (428)
T ss_dssp TTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT------TC
T ss_pred HHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC------Ce
Confidence 5 47899999999864 3478999999999975 6788999999999999988 99999999999 99
Q ss_pred eEEeecccccccccccCCCc-c-ccccCC------CCc--EEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccC
Q 017569 240 PIHVDAASGGFIAPFLYPDL-E-WDFRLP------LVK--SINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLG 308 (369)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~-~-~~~~~~------~~D--si~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~ 308 (369)
++|+|++|+++.+ ..... . ..+... ..| .+..++||+++ .+.+.|++++.+++.. ..+.....+
T Consensus 223 ~li~Dea~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~-~~~~~~~~~-- 297 (428)
T 1iay_A 223 HLVCDEIYAATVF--DTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVV-NCARKMSSF-- 297 (428)
T ss_dssp EEEEECTTGGGCC--SSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHH-HHHHHHHTT--
T ss_pred EEEEecccccccc--CCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHH-HHHHHHHhc--
Confidence 9999999987543 11110 0 111111 157 67889999985 4456799988543332 222111000
Q ss_pred CCCCCccccCCcchhHHHHHHHHHHHhcHh-----hHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 309 SDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-----VIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 309 ~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~-----G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
++- ..+.+.++...+... .++++ +..++.+++.+.|++.|+
T Consensus 298 ---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 345 (428)
T 1iay_A 298 ---------GLV---STQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI 345 (428)
T ss_dssp ---------SCC---CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------ccC---CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111 123334444444322 34444 778899999999988753
No 135
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.82 E-value=6.9e-19 Score=167.81 Aligned_cols=252 Identities=11% Similarity=0.035 Sum_probs=171.7
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+...+. .+++.+.+++.+.++.. ..|. .++..+++++ +++++|.++ ...++|+|+++++.+++.+
T Consensus 27 idl~~~~~~~~~~~~v~~a~~~~~~~~-~~y~-~~~~~~l~~~----la~~~~~~~-----~~v~~~~g~~~al~~~~~~ 95 (364)
T 1lc5_A 27 LDFSANINPLGMPVSVKRALIDNLDCI-ERYP-DADYFHLHQA----LARHHQVPA-----SWILAGNGETESIFTVASG 95 (364)
T ss_dssp EECSSCCCTTCCCHHHHHHHHHTGGGG-GSCC-CTTCHHHHHH----HHHHHTSCG-----GGEEEESSHHHHHHHHHHH
T ss_pred EEeccccCCCCCCHHHHHHHHHHHHHh-hcCC-CCCHHHHHHH----HHHHHCcCH-----HHEEECCCHHHHHHHHHHH
Confidence 444444332 34577888888877542 2222 2345555555 777778764 2489999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
+ + +++|+++.++|..+...++..|++++.+|+++ +++.+ ++++.+.+++++++|+++.|+|||
T Consensus 96 ~--~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~npt 159 (364)
T 1lc5_A 96 L--K-------------PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPT 159 (364)
T ss_dssp H--C-------------CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTT
T ss_pred c--C-------------CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCC
Confidence 6 2 36899999999999999999999999999875 23443 566666676788999999999999
Q ss_pred ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEE
Q 017569 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 216 G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~ 290 (369)
|.+.| +++|+++|+++ ++++|+|++|+.+... ....... ...+.+.+..++||+++ .+.++|++++
T Consensus 160 G~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 230 (364)
T 1lc5_A 160 GLLPERPLLQAIADRCKSL------NINLILDEAFIDFIPH---ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVN 230 (364)
T ss_dssp CCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGSTT---CCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEEC
T ss_pred CCCCCHHHHHHHHHHhhhc------CcEEEEECcChhhccC---ccchhhHhccCCCEEEEEECchhhcCCccceEEEEE
Confidence 99987 99999999999 9999999999875431 1111121 23356788889999986 3456798883
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.+++.. +.+.... .. ++. ..+.++++...+.. +.++++ +..++.+++.+.|++.+
T Consensus 231 ~~~~~~-~~l~~~~-------~~----~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (364)
T 1lc5_A 231 SDDAAM-ARMRRQQ-------MP----WSV---NALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLP 288 (364)
T ss_dssp CCHHHH-HHHHHHS-------CT----TCS---CHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CCHHHH-HHHHHhC-------CC----CCC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 333222 2221100 01 111 24455555555543 345555 67788899999998763
No 136
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.82 E-value=1.8e-18 Score=169.64 Aligned_cols=285 Identities=12% Similarity=0.018 Sum_probs=183.8
Q ss_pred HHHHHHHHHhhhhc-CCCCccccccccCC-ChHHHHHHHHHHhcc-----CCCCCCCCcchHHHHHHHHHHHHHHhCCCC
Q 017569 40 EAAYQVINDELMLD-GNPRLNLASFVTTW-MEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (369)
Q Consensus 40 ~~i~~~l~~~~~~~-~~p~~~l~~~~~~~-~~~~v~~~~~~~~~~-----n~~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (369)
+++.+........+ +...++|+.+.+.. .++.+.+++.+++.. ....|....+..++++++.+++. .|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~ 130 (449)
T 3qgu_A 53 PEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGR 130 (449)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTC
T ss_pred HHHHHHHHHHHhhCCCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCC
Confidence 34444444433323 34456777665543 467788888877763 33344444678889988877776 55543
Q ss_pred CCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce----------eEEEe
Q 017569 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE----------LKEVK 182 (369)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~----------v~~v~ 182 (369)
+ ....++|+|+++++..+ .++..+ ++.|+++.++|.++...++..|.+ ++.+|
T Consensus 131 ~---~~~i~~t~G~~~al~~~-~~l~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 193 (449)
T 3qgu_A 131 A---ADEIFISDGSKCDIARI-QMMFGS-------------KPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMV 193 (449)
T ss_dssp C---GGGEEEESCHHHHHHHH-HHHHCS-------------SSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEE
T ss_pred C---HHHEEEccCHHHHHHHH-HHHhCC-------------CCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEe
Confidence 2 24689999999999876 554331 468999999999999999999998 99999
Q ss_pred ccCC-ccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCC
Q 017569 183 LEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (369)
Q Consensus 183 ~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (369)
++++ .+..|++++ +++++|+++.|+||||.+-+ +++|+++|+++ ++++++|++|+++...--.+.
T Consensus 194 ~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~------~~~li~Dea~~~~~~~~~~~~ 262 (449)
T 3qgu_A 194 CNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN------GSILVYDAAYALYISNPDCPK 262 (449)
T ss_dssp CCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCCTTSCS
T ss_pred cccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC------CcEEEEEcchHhhhcCCCCCC
Confidence 8753 355565332 57899999999999999854 88899999999 999999999998554100010
Q ss_pred cccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCccc-ccccccCccCCCCCCccccCCcchhHHHHHHHHHHHh
Q 017569 259 LEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPD-ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (369)
Q Consensus 259 ~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~-~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~l 335 (369)
.-..+. ....+.+..+++|+++ .+.++|+++.+++ .... .......+... .. .+-.+...+.+.+++..+
T Consensus 263 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~a~~~~l 335 (449)
T 3qgu_A 263 TIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA-LKYANGEPVHADWNRV--MT----TCFNGASNIVQAGGLACL 335 (449)
T ss_dssp SGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT-CBCTTSCBHHHHHHHH--HH----HSCCCCCHHHHHHHHHHT
T ss_pred CHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH-HHhhhhhhHHHHHHHH--hh----cccCCCCHHHHHHHHHHH
Confidence 011111 1345677888999986 6678899987543 3211 00000000000 00 000011244555555555
Q ss_pred cH---hhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 336 GF---EVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 336 g~---~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. +.+.++ +..++.+++.+.|++.|+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 366 (449)
T 3qgu_A 336 QPEGLKEMNAMIKFYKENAQILKTTFTEMGF 366 (449)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 44 334455 788999999999998764
No 137
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.82 E-value=1.5e-18 Score=163.24 Aligned_cols=238 Identities=12% Similarity=0.043 Sum_probs=166.9
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
++++.+.+++.+.+... ..| ..++..++++ .+++++|+++ ...++|+|+++++.+++.++ +
T Consensus 29 ~~~~~v~~a~~~~~~~~-~~y-~~~~~~~lr~----~la~~~~~~~-----~~i~~t~G~~~~l~~~~~~~--~------ 89 (337)
T 3p1t_A 29 AVEPRVQAAIAAAAARI-NRY-PFDAEPRVMR----KLAEHFSCPE-----DNLMLVRGIDECFDRISAEF--S------ 89 (337)
T ss_dssp CCCHHHHHHHHHHGGGT-TSC-CTTHHHHHHH----HHHHHHTSCG-----GGEEEESHHHHHHHHHHHHS--T------
T ss_pred CCCHHHHHHHHHhhhhh-ccC-CCCchHHHHH----HHHHHhCcCH-----HHEEEeCCHHHHHHHHHHhc--C------
Confidence 45688888888877542 222 2345555554 4788888875 34899999999998888775 2
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHH
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~ 226 (369)
+++|+++.++|.++...++..|++++.+|++++ +.+|+++|+++ .++++|++++|+||||.+.|+++|.+
T Consensus 90 -------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~ 159 (337)
T 3p1t_A 90 -------SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD-LLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQ 159 (337)
T ss_dssp -------TSEEEEESSSCSHHHHHHTTSCCEEEEECBCTT-SSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHH
T ss_pred -------CCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 478999999999999999999999999999864 89999999887 46889999999999999999999999
Q ss_pred HHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccC
Q 017569 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHIN 305 (369)
Q Consensus 227 l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~ 305 (369)
+|+++ ++ +++|++|+.+.. . . .........+.+..+.+|+++ .+.+.|+++..+ +.. ..+.. .
T Consensus 160 l~~~~------~~-~ivDea~~~~~~--~-~--~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~-~~l~~-~- 223 (337)
T 3p1t_A 160 LRQRA------GK-LLIDETYVDYSS--F-R--ARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS-ELI-AAMKR-K- 223 (337)
T ss_dssp HHHHC------SE-EEEECTTGGGSS--C-S--SSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH-HHH-HHHHT-T-
T ss_pred HHHhC------Cc-EEEECCChhhcc--c-c--ccccccCCCEEEEeeCchhccCcchheEEEEeCH-HHH-HHHHh-h-
Confidence 99999 87 566999986432 1 1 111223356778888999985 567789887643 221 12111 0
Q ss_pred ccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 306 YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 306 y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
. .. ++.+. +.+.+....+.. +.+.+. +..++.+++.+.|++.|+
T Consensus 224 --~---~~----~~~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 270 (337)
T 3p1t_A 224 --Q---WF----CNVGT---LDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY 270 (337)
T ss_dssp --S---CT----TCSCH---HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --c---CC----CCCCH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 0 00 12222 233333333322 234444 677788899999988763
No 138
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.82 E-value=1.1e-19 Score=176.61 Aligned_cols=212 Identities=12% Similarity=-0.039 Sum_probs=151.1
Q ss_pred CCcccccccc------CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 56 PRLNLASFVT------TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 56 p~~~l~~~~~------~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
..++|+.+.+ .++++.+.+++.+..+.....|....+..++++++.+++.+..+.+. ...+++|+||++|
T Consensus 39 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~----~~~i~~t~g~~~a 114 (418)
T 3rq1_A 39 NVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEG----HIRSIATAGGTGG 114 (418)
T ss_dssp GCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS----EEEEEEESHHHHH
T ss_pred CeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccc----cccEEECCchHHH
Confidence 4456666643 23456777777665443334455566789999998888877766441 1248999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCc-
Q 017569 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI- 204 (369)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~- 204 (369)
+..++.++.++ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++ +++
T Consensus 115 l~~~~~~l~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 181 (418)
T 3rq1_A 115 IHHLIHNYTEP-------------GDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNV 181 (418)
T ss_dssp HHHHHHHHSCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHhcCC-------------CCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCE
Confidence 99998887542 479999999999999999999999999999654489999999999986 666
Q ss_pred EEEEeeC-CCCcccCCCHHH---HHHHHH------HhhhccCCCceEEeecccccccccccC-CCccccccCCCCc---E
Q 017569 205 CVAAILG-STLTGEFEDVKL---LHDLLT------KKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFRLPLVK---S 270 (369)
Q Consensus 205 ~v~~~~~-~~~tG~~~~l~~---I~~l~~------~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~D---s 270 (369)
++++++| +||||.+.+.++ |+++|+ ++ ++++++|++|.++...-.. ...........-| .
T Consensus 182 ~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i 255 (418)
T 3rq1_A 182 VVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRN------NVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTC 255 (418)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSC------EEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEE
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCC------CeEEEEecccccccCChHHHHHHHHHHHhcCCCceEE
Confidence 7888889 999999977555 555555 77 9999999999765431000 0000011111123 4
Q ss_pred EEEcCccCCC-CCCCeEEEEE
Q 017569 271 INVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 271 i~~~~hK~l~-~p~g~g~l~~ 290 (369)
++.+.+|.++ .+.+.|+++.
T Consensus 256 ~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 256 VCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp EEEESTTTTTCCSSCCEEEEE
T ss_pred EEEeCCCCCcCcCCcceEEEE
Confidence 5568999875 5577899886
No 139
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.82 E-value=1.8e-19 Score=176.22 Aligned_cols=222 Identities=14% Similarity=0.014 Sum_probs=155.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHhhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYF 174 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~~~~ 174 (369)
++++++++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.++.. .+...
T Consensus 86 ~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~~~~ 145 (430)
T 3ri6_A 86 DLEQRLKNLTGALG-------VLALGSGMAAISTAILTLARA-------------GDSVVTTDRLFGHTLSLFQKTLPSF 145 (430)
T ss_dssp HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHHHHHHHHHc
Confidence 44455889999874 678888899999888877432 4789999999988776 66678
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|++++.+|.+ |+++|+++++++|++|++++|+||+|.+.|+++|+++|+++ ++++|+|++|+.+..
T Consensus 146 G~~~~~v~~~------d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~------g~~livD~a~~~~~~-- 211 (430)
T 3ri6_A 146 GIEVRFVDVM------DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAK------GIPLVVDTTMTPPYL-- 211 (430)
T ss_dssp TCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTT------TCCEEEECTTSCTTT--
T ss_pred CCEEEEeCCC------CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9999988865 79999999999999999999999999999999999999999 999999999985443
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCC--CeEEEEEeCCCCccc--cccc------ccCccCCCCCCc-cccCCcchh
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPD--ELVF------HINYLGSDQPTF-TLNFSKGSS 323 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~--g~g~l~~~~~~~~~~--~~~~------~~~y~~~~~~~~-~l~~tr~~~ 323 (369)
..+ . ..++|.++.+++|++++|. -.|+++.+....... .+.. ...+........ ...|.. .
T Consensus 212 ~~~---~---~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~--~ 283 (430)
T 3ri6_A 212 LEA---K---RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPS--L 283 (430)
T ss_dssp CCG---G---GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCC--C
T ss_pred CCh---H---HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCC--C
Confidence 111 1 2378999999999997662 346666544322210 0000 000000000000 000111 1
Q ss_pred HHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 324 QIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
..+.+|..++.+ +.+..+ +..++|+++++.|++.+.+++
T Consensus 284 ~~~~a~l~l~~l--~~l~~r~~~~~~na~~la~~L~~~p~v~~ 324 (430)
T 3ri6_A 284 SPHNAYLQSLGL--ETMALRIERSCQNAQELAHWLLSIPQVKC 324 (430)
T ss_dssp CHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCTTCEE
T ss_pred CHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHhCCCCccE
Confidence 245566655543 344444 889999999999998877664
No 140
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.82 E-value=1.9e-19 Score=175.41 Aligned_cols=211 Identities=13% Similarity=-0.000 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----hh
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RY 173 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~----~~ 173 (369)
+++++.+++++|.+. .++++||++|+.+++.++..+ +++|+++.+.|.+....+ +.
T Consensus 85 ~~le~~lA~l~g~~~-------~i~~ssGt~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~l~~ 144 (415)
T 2fq6_A 85 FSLQQAMCELEGGAG-------CVLFPCGAAAVANSILAFIEQ-------------GDHVLMTNTAYEPSQDFCSKILSK 144 (415)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCCT-------------TCEEEEETTSCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHHH
Confidence 345555889999863 677899999999888875331 478999999998766543 45
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH--hhhccCCCceEEeeccccccc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~--~~~~~~~~~~l~vD~a~~~~~ 251 (369)
.|+++++++.+ |+++|+++|+++|++|++.+++||+|.+.|+++|+++|++ + ++++|+|++|+.+.
T Consensus 145 ~G~~v~~v~~~------d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~------g~~livD~a~a~~~ 212 (415)
T 2fq6_A 145 LGVTTSWFDPL------IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVP------DAIIMIDNTWAAGV 212 (415)
T ss_dssp GTCEEEEECTT------CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCT------TCEEEEECTTTTTT
T ss_pred cCcEEEEECCC------CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcC------CCEEEEECCCcccc
Confidence 68888888753 6889999999999999999999999999999999999999 9 99999999998543
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
. .. +.. .++|.++.++||+++++.+ .|+++.++ +.. +.+....... |+.. .....|
T Consensus 213 ~--~~---p~~---~g~Div~~S~sK~lg~~g~~~~G~l~~~~-~~~-~~l~~~~~~~----------G~~~--~~~~a~ 270 (415)
T 2fq6_A 213 L--FK---ALD---FGIDVSIQAATKYLVGHSDAMIGTAVCNA-RCW-EQLRENAYLM----------GQMV--DADTAY 270 (415)
T ss_dssp S--SC---GGG---GTCSEEEEETTTTTTCSSSCCCEEEEECT-TTH-HHHHHHHHHT----------TCCC--CHHHHH
T ss_pred c--CC---ccc---cCCeEEEEeCccccCCCCCceEEEEEeCH-HHH-HHHHHHHHhc----------CCCC--CHHHHH
Confidence 2 11 122 3789999999999976654 58887754 332 2221110111 1111 133445
Q ss_pred HHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 330 YQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 330 ~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
..++.+ +.+..+ +..+++++++++|++.+.+++
T Consensus 271 ~~~~~l--~~l~~r~~~~~~n~~~l~~~L~~~~~v~~ 305 (415)
T 2fq6_A 271 ITSRGL--RTLGVRLRQHHESSLKVAEWLAEHPQVAR 305 (415)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHhhh--hHHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 544443 233333 778899999999998765543
No 141
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.82 E-value=1.8e-19 Score=173.49 Aligned_cols=203 Identities=11% Similarity=-0.027 Sum_probs=147.3
Q ss_pred hHHHHHHHHH-HhccC-CCCCCCCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMA-SINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 69 ~~~v~~~~~~-~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
++.+.+++.+ +++.. ...|....+..++++++.+++.+..+. +++ ....++|+||++|+.+++.....-
T Consensus 46 ~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~---~~~i~~t~g~~~a~~~~~~~~~~~---- 118 (397)
T 3fsl_A 46 LQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQ---RVATIQTLGGSGALKVGADFLKRY---- 118 (397)
T ss_dssp CHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT---CEEEEEESHHHHHHHHHHHHHHHH----
T ss_pred cHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccccc---ceEEEEcCCcHHHHHHHHHHHHhc----
Confidence 4788999888 88653 344555567888988877777654442 221 014899999999999886543211
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHh---hcCcEEEEeeCCCCcccC--
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF-- 218 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~-- 218 (369)
..+++|+++.++|..+...++..|++++.+|+. ++++.+|+++|+++++ ++++++++++++||||.+
T Consensus 119 -------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~ 191 (397)
T 3fsl_A 119 -------FPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLT 191 (397)
T ss_dssp -------CTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCC
T ss_pred -------CCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCC
Confidence 014689999999999999999999999999983 3458999999999998 567888999999999999
Q ss_pred -CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcc-ccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 219 -EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 219 -~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
+++++|+++|+++ ++++|+|++|+.+....-.+... ..+ ....-..+..+.+|.++ .+.+.|++++.
T Consensus 192 ~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 192 NDQWDAVIEILKAR------ELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp HHHHHHHHHHHHHT------TCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHhC------CEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 5577999999999 99999999998765310000000 011 12233455667889986 45668998763
No 142
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.82 E-value=1.4e-19 Score=174.68 Aligned_cols=255 Identities=14% Similarity=0.003 Sum_probs=171.2
Q ss_pred ccccccccC---CChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHH
Q 017569 58 LNLASFVTT---WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (369)
Q Consensus 58 ~~l~~~~~~---~~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (369)
++|..+.+. .+++.+.+++.++++.+ ...|...++..+++++ +++++|.++ ..+++|+|+++|+.
T Consensus 35 i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~g~~~-----~~v~~~~g~~~al~ 105 (397)
T 2zyj_A 35 LSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAF----VAEWIGVRP-----EEVLITTGSQQALD 105 (397)
T ss_dssp EEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH----HHHHHTSCG-----GGEEEESHHHHHHH
T ss_pred eecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH----HHHHhCCCh-----hhEEEeccHHHHHH
Confidence 455554443 24577888888777542 2344444566777777 555557654 34899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-cCcEE-EEe
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICV-AAI 209 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v-~~~ 209 (369)
.++.++.++ +++|+++.++|..+...++..|++++.+|++++ + +|+++|++++++ ++++| +++
T Consensus 106 ~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~-~d~~~l~~~l~~~~~~~v~~~~ 170 (397)
T 2zyj_A 106 LVGKVFLDE-------------GSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-G-PDLDALEEVLKRERPRFLYLIP 170 (397)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-E-ECHHHHHHHHHHCCCSCEEECC
T ss_pred HHHHHhCCC-------------CCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-C-CCHHHHHHHHhhcCCeEEEECC
Confidence 988887432 468999999999999999999999999999764 4 999999999987 78887 578
Q ss_pred eCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C--C---CCcEEEEcCccCCC
Q 017569 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--P---LVKSINVSGHKYGL 280 (369)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--~---~~Dsi~~~~hK~l~ 280 (369)
.++||||.+.| +++|+++|+++ ++++++|++|+.+... ......+. . . .-..+..++||+++
T Consensus 171 ~~~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 241 (397)
T 2zyj_A 171 SFQNPTGGLTPLPARKRLLQMVMER------GLVVVEDDAYRELYFG---EARLPSLFELAREAGYPGVIYLGSFSKVLS 241 (397)
T ss_dssp BSCTTTCCBCCHHHHHHHHHHHHHH------TCCEEEECTTTTCBCS---SCCCCCHHHHHHHHTCCCEEEEEESTTTTC
T ss_pred CCcCCCCCcCCHHHHHHHHHHHHHc------CCEEEEeCCcccccCC---CCCCCchhhhCcccCCCeEEEEeccccccc
Confidence 99999999866 45899999999 9999999999875431 11111111 1 1 22366778999998
Q ss_pred CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH---hhHHHH--HhhHHHHHHHHH
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EVIPSF--CCVDHKKLSSFF 355 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~---~G~~~~--~~~~~a~~l~~~ 355 (369)
.+.++|++++++ +.. +.+...... ++. ++ + .+.++++...+.. +.++++ +..++.+++.+.
T Consensus 242 ~G~r~G~~~~~~-~~~-~~l~~~~~~-------~~~-~~-~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 242 PGLRVAFAVAHP-EAL-QKLVQAKQG-------ADL-HT-P---MLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp GGGCCEEEECCH-HHH-HHHHHHHHH-------HHS-SC-C---HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEecCH-HHH-HHHHHHHHh-------hcC-CC-C---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 446789998753 222 222110000 000 11 1 2333344444432 335554 677888899999
Q ss_pred HHhc
Q 017569 356 VIHS 359 (369)
Q Consensus 356 L~~~ 359 (369)
|++.
T Consensus 308 L~~~ 311 (397)
T 2zyj_A 308 LDRE 311 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 143
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.82 E-value=1.7e-19 Score=175.93 Aligned_cols=216 Identities=18% Similarity=0.096 Sum_probs=153.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEE---eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHH------
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWE------ 168 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~-~~h~s~~------ 168 (369)
++.+.+++++|.+. .++ +++|++||..++.++.++ +++|+++. +.|..+.
T Consensus 77 ~Le~~lA~l~g~e~-------alv~p~~~sGt~Ai~~al~all~p-------------GD~Vl~~~~~~y~~~~~~~g~~ 136 (427)
T 3i16_A 77 SLDAVYARVFNTES-------ALVRPHFVNGTHALGAALFGNLRP-------------GNTMLSVCGEPYDTLHDVIGIT 136 (427)
T ss_dssp HHHHHHHHHHTCSE-------EEEETTCCSHHHHHHHHHHHHCCT-------------TCEEEESSSSCCGGGHHHHTCS
T ss_pred HHHHHHHHHhCCcc-------eEEeCCCccHHHHHHHHHHHHhCC-------------CCEEEEeCCCccHHHHHHHhcc
Confidence 34455999999975 466 889999999888876542 47899998 8887655
Q ss_pred -----HHHhhhcceeEEEeccCCccccCHHHHHHHHh--hcCcEEEEee----CCCCcccCCCHHHHHHHHHH--hhhcc
Q 017569 169 -----KFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEET 235 (369)
Q Consensus 169 -----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~----~~~~tG~~~~l~~I~~l~~~--~~~~~ 235 (369)
..++..|++++.+|++++ +.+|+++|+++++ ++|++|+++. |+||+|.+.|+++|+++|++ +
T Consensus 137 ~~~~~~~l~~~G~~~~~v~~~~~-g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~---- 211 (427)
T 3i16_A 137 ENSNMGSLKEFGINYKQVDLKED-GKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRK---- 211 (427)
T ss_dssp CCCSSCCTGGGTCEEEECCCCTT-SSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCT----
T ss_pred ccchHHHHHHcCCEEEEecCccC-CCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCC----
Confidence 345667999999998765 7999999999999 7899999999 99999999999999999999 8
Q ss_pred CCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC--CCeEEEEEeCCCCccccccc--ccCccCCCC
Q 017569 236 GWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRTKDDLPDELVF--HINYLGSDQ 311 (369)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p--~g~g~l~~~~~~~~~~~~~~--~~~y~~~~~ 311 (369)
++++++|++|+.+.. ... +.. .++|.++.++||+++++ ...|+++.+ +++. +.+.. ....++..
T Consensus 212 --g~~livD~a~~~~~~---~~~-p~~---~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li-~~l~~~~~~~~~g~~- 279 (427)
T 3i16_A 212 --DIICFVDNCYGEFMD---TKE-PTD---VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCI-EKTSYRLTVPGIGGE- 279 (427)
T ss_dssp --TSEEEEECTTTTTSS---SSC-GGG---GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHSCTTTGGG-
T ss_pred --CCEEEEECCCccccc---cCC-ccc---cCCeEEEecCcccCCCCCCceEEEEEEC-HHHH-HHHHHhcccCccCcc-
Confidence 999999999986542 111 112 37899999999998663 334887764 3232 22211 11111110
Q ss_pred CCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 312 ~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.+.... ..|..++.+.... ..+ +..++|.++++.|+++|+
T Consensus 280 ------~~~~~~---~a~~~l~gl~~~~-~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3i16_A 280 ------CGSTFG---VVRSMYQGLFLAP-HISMEALKGAILCSRIMELAGF 320 (427)
T ss_dssp ------CCCCTT---CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTC
T ss_pred ------CCccHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCC
Confidence 011010 1345554443222 122 899999999999999987
No 144
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.82 E-value=9.7e-19 Score=171.64 Aligned_cols=211 Identities=9% Similarity=-0.094 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HH
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FA 171 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~ 171 (369)
...++++++++++|.+. .+++++|++|+.+++.++.++ +++|+++.+.|.++.. .+
T Consensus 115 ~~~~l~~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~ 174 (445)
T 1qgn_A 115 TTVVLEEKISALEGAES-------TLLMASGMCASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETIL 174 (445)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHSCS-------------SCEEEEETTSCHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHHHHHHH
Confidence 34456667899999863 566677779999998876431 4689999999987665 35
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcC-cEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENT-ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~-~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~ 250 (369)
+..|++++++|.+ |+++|+++|+++| ++|++++++||+|.+.|+++|+++|+++ ++++|+|++|+.+
T Consensus 175 ~~~G~~v~~v~~~------d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~------g~~livD~a~~~~ 242 (445)
T 1qgn_A 175 PKMGITATVIDPA------DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEK------GALVCIDGTFATP 242 (445)
T ss_dssp GGGTCEEEEECSS------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTCT
T ss_pred HHcCCEEEEeCCC------CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCccc
Confidence 6679999888764 7999999999999 9999999999999999999999999999 9999999999854
Q ss_pred cccccCCCccccccCCCCcEEEEcCccCCCCCC--CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHH
Q 017569 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (369)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~ 328 (369)
.. ..+ . ..++|.++.++||+++++. ..|+++.++ +.. ..+....... |+. ...+..
T Consensus 243 ~~--~~~---~---~~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~-~~l~~~~~~~----------g~~--~~~~~a 300 (445)
T 1qgn_A 243 LN--QKA---L---ALGADLVLHSATKFLGGHNDVLAGCISGPL-KLV-SEIRNLHHIL----------GGA--LNPNAA 300 (445)
T ss_dssp TT--CCT---T---TTTCSEEEECTTTTTTCSSSCCCEEEEECH-HHH-HHHHHHHHHH----------CCC--CCHHHH
T ss_pred cc--CCc---c---ccCCEEEEECCcccccccccceEEEEEECH-HHH-HHHHHHHHHh----------CCC--CCHHHH
Confidence 32 111 1 2378999999999986443 278888754 222 1211100001 111 123445
Q ss_pred HHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCC
Q 017569 329 YYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYF 362 (369)
Q Consensus 329 ~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~ 362 (369)
|..++.+. .+..+ +..+++++++++|++.+.+
T Consensus 301 ~~~~~~l~--~l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 301 YLIIRGMK--TLHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp HHHHHHGG--GHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHhHH--HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 66555553 23333 7778899999999988755
No 145
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.82 E-value=3.1e-19 Score=173.15 Aligned_cols=271 Identities=12% Similarity=0.012 Sum_probs=175.9
Q ss_pred Ccccccccc-----C-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHH
Q 017569 57 RLNLASFVT-----T-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (369)
Q Consensus 57 ~~~l~~~~~-----~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (369)
.++|+.+.+ . ++++.+.+++.+..+.....|....+..++++++.+++.+..+.+. ...+++|+||++|+
T Consensus 39 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~----~~~i~~t~g~~~al 114 (413)
T 3t18_A 39 VINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEG----YISAIATPGGTGAI 114 (413)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS----EEEEEEESHHHHHH
T ss_pred eEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccc----cCcEEEcCccHHHH
Confidence 355555543 2 3456777777664433333445556888999998888877665431 12589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh----cCc-E
Q 017569 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI-C 205 (369)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~-~ 205 (369)
..++.++.++ +++|+++.++|..+...++..|++++.+|+.++++.+|+++|++++++ +++ +
T Consensus 115 ~~~~~~~~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 181 (413)
T 3t18_A 115 RSAIFSYLDE-------------GDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIA 181 (413)
T ss_dssp HHHHHHHCCS-------------SCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhcCC-------------CCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEE
Confidence 9998877442 478999999999999999999999999998543489999999999986 676 7
Q ss_pred EEEeeC-CCCcccCCCHHHHH---HHHH------HhhhccCCCceEEeecccccccccccCCCc-cc--cccCCCCc---
Q 017569 206 VAAILG-STLTGEFEDVKLLH---DLLT------KKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW--DFRLPLVK--- 269 (369)
Q Consensus 206 v~~~~~-~~~tG~~~~l~~I~---~l~~------~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~--~~~~~~~D--- 269 (369)
+++++| +||||.+.+.+++. ++|+ ++ ++++++|++|.++.. ..... .+ ......-+
T Consensus 182 vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (413)
T 3t18_A 182 SLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDK------KITLIVDVAYLEFAG--DGDQQRKFFEKFSNLPRNLFV 253 (413)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTC------EEEEEEECTTGGGSS--SSSTTTGGGGGGTTCCTTEEE
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCC------cEEEEEecccccccC--ChhhHHHHHHHHhhcCCCeeE
Confidence 888889 99999997755554 5555 78 999999999987543 11111 11 11111123
Q ss_pred EEEEcCccCCC-CCCCeEEEEEe--CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-------
Q 017569 270 SINVSGHKYGL-VYAGVGWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV------- 339 (369)
Q Consensus 270 si~~~~hK~l~-~p~g~g~l~~~--~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G------- 339 (369)
.+..+.+|.++ .+.+.|+++.. +++.. ..+.....+... ++-.....+.+.++...+....
T Consensus 254 i~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 324 (413)
T 3t18_A 254 VVAFSMSKSHTAYGLRSGAAVGISSSKEII-EEFEASLAHSAR--------CNWSNGTHAAQNILIELERAENKKIYEQE 324 (413)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEEEESCHHHH-HHHHHHHHHHHH--------HHTSSCCHHHHHHHHHTTSHHHHHHHHHH
T ss_pred EEEEecCccCCCcCcCcEEEEEecCCHHHH-HHHHHHHHHhhh--------ccccCCChHHHHHHHHHhcChHHHHHHHH
Confidence 44558999986 55678999873 33222 222110000000 0000112344445555554322
Q ss_pred HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 340 IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 340 ~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+++ +..++.+++.+.|++.|+
T Consensus 325 ~~~~~~~~~~~~~~l~~~l~~~g~ 348 (413)
T 3t18_A 325 LVDLRNMLKSRADVFVTAAKENKL 348 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2233 677788888999988753
No 146
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.81 E-value=4e-20 Score=174.93 Aligned_cols=185 Identities=15% Similarity=0.088 Sum_probs=131.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
..++++.+.+++.++.... ..|...++..+++ +++++++|.+. .++++||++|+.+++.++.++
T Consensus 13 ~~~p~~~~~~a~~~~~~~~-~~y~~~~~~~~l~----~~la~~~g~~~-------~~~~~~gt~a~~~~~~~~~~~---- 76 (347)
T 1jg8_A 13 VTKPTEEMRKAMAQAEVGD-DVYGEDPTINELE----RLAAETFGKEA-------ALFVPSGTMGNQVSIMAHTQR---- 76 (347)
T ss_dssp GCCCCHHHHHHHHTCCCCC-GGGTCCHHHHHHH----HHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCCCCHHHHHHHhcCCCCC-cccCCChHHHHHH----HHHHHHhCCce-------EEEecCcHHHHHHHHHHhcCC----
Confidence 3345577777776553221 1233445555555 45888888864 788999999998887765331
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHH---HHhhhcceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCc
Q 017569 145 RKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT 215 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~t 215 (369)
+++|+++.++|.+... .+...|++++.+ .++ ++.+|+++|++++++ ++++|++++++|||
T Consensus 77 ---------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt 145 (347)
T 1jg8_A 77 ---------GDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRS 145 (347)
T ss_dssp ---------TCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTT
T ss_pred ---------CCEEEEcCcchhhhccccchhhccCeEEEEe-cCC-CCccCHHHHHHHhccccccccCceEEEEecccccc
Confidence 4789999999976543 566789998888 444 478999999999975 68899999999999
Q ss_pred -ccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC
Q 017569 216 -GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (369)
Q Consensus 216 -G~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g 284 (369)
|.+.| +++|+++|+++ ++++|+|++|..+...+. +.....+ ..++|.+++++||++++|.|
T Consensus 146 ~G~~~~~~~l~~i~~~a~~~------~~~li~D~a~~~~~~~~~-~~~~~~~-~~~~d~~~~s~sK~l~~~~G 210 (347)
T 1jg8_A 146 GGRVVPLENIKEICTIAKEH------GINVHIDGARIFNASIAS-GVPVKEY-AGYADSVMFCLSKGLCAPVG 210 (347)
T ss_dssp TSBCCCHHHHHHHHHHHHHH------TCEEEEEETTHHHHHHHH-CCCHHHH-HHTCSEEEEESSSTTCCSSC
T ss_pred CCccCcHHHHHHHHHHHHHC------CCEEEeehhhhhcchhhc-CCChHHh-cccccEEEEecccccCCCce
Confidence 99855 57899999999 999999998743211111 1001111 13678889999999987754
No 147
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.81 E-value=5.9e-19 Score=171.22 Aligned_cols=253 Identities=10% Similarity=0.001 Sum_probs=158.8
Q ss_pred ChHHHHHHHHHHhccCC-CCCC---CCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNY-VDMD---EYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~-~~~~---~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.++.+.+++.+.+.... ..+. .++ ....+++..++++++++|.+. ..++++||++|+..++.++..+
T Consensus 44 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------~~v~~~~Gs~a~~~al~~~~~~ 117 (425)
T 3ecd_A 44 VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGH------ANVQPHSGAQANGAVMLALAKP 117 (425)
T ss_dssp CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCCT
T ss_pred CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCC------ceeecCchHHHHHHHHHHccCC
Confidence 36888888888774321 1111 111 122556556688999999875 1345889999999888877432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcch-HHHHH--hhhcce--eEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCC
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVC-WEKFA--RYFEVE--LKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTL 214 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s-~~~~~--~~~G~~--v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~ 214 (369)
+++|+++.++|.+ +...+ ...|.. ++.++++++++.+|+++|+++++ +++++|+++.++|
T Consensus 118 -------------gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~- 183 (425)
T 3ecd_A 118 -------------GDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY- 183 (425)
T ss_dssp -------------TCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC-
T ss_pred -------------CCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC-
Confidence 4789999999987 22222 245654 44555555558999999999997 5899999887776
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~ 294 (369)
|...++++|.++|+++ |+++|+|++|..+.. ..+..... ...+|.++.++||++.+|. .|+++.+++.
T Consensus 184 -~~~~~l~~i~~l~~~~------~~~li~De~~~~g~~--~~~~~~~~--~~~~di~~~s~sK~l~g~~-~g~~~~~~~~ 251 (425)
T 3ecd_A 184 -PRKLDFARFRAIADSV------GAKLMVDMAHIAGVI--AAGRHANP--VEHAHVVTSTTHKTLRGPR-GGFVLTNDEE 251 (425)
T ss_dssp -CSCCCHHHHHHHHHHH------TCEEEEECGGGHHHH--HTTSSCCG--GGTCSEEEEESSGGGCCCS-CEEEEESCHH
T ss_pred -CCcCCHHHHHHHHHHc------CCEEEEECcChHhhh--hcccccCc--hhcCcEEEecCCcccCCCC-cEEEEeCCHH
Confidence 5789999999999999 999999999654433 11111111 2247899999999996665 5888775432
Q ss_pred CcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.. ..+.. ..+.+ ..++.......+++.++.....+++.++ +..++++++++.|.+.|+
T Consensus 252 ~~-~~~~~-~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 311 (425)
T 3ecd_A 252 IA-KKINS-AVFPG-------LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV 311 (425)
T ss_dssp HH-HHHHH-HHC------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HH-HHHHh-hhCcc-------ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 21 11111 00110 1123333345566666666666677666 889999999999998764
No 148
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.81 E-value=6.1e-19 Score=170.90 Aligned_cols=283 Identities=10% Similarity=-0.006 Sum_probs=176.5
Q ss_pred CCCCcccccccc------CCChHHHHHHHHHHhcc--CCCCCCCCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEE-
Q 017569 54 GNPRLNLASFVT------TWMEPECDKLVMASINK--NYVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVG- 122 (369)
Q Consensus 54 ~~p~~~l~~~~~------~~~~~~v~~~~~~~~~~--n~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~- 122 (369)
+...++|+.+.+ .++++.+.+++.+.+.. ....|....+..++++++.+++....|. ++ ..+++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~-----~~v~~~ 103 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQE-----KRVGGV 103 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEE
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCC-----CcEEEE
Confidence 334456666553 23447788888887722 3344545567788888877766544333 22 24788
Q ss_pred -eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce-eEEEecc-CCccccCHHHHHHHH
Q 017569 123 -TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKLE-EGYYVMNPVKAVELV 199 (369)
Q Consensus 123 -t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~-v~~v~~~-~~~~~~d~~~L~~~i 199 (369)
|+||++|+.+++..+... . +|.....++|+++.++|..+...++..|++ ++.+|++ ++++.+|+++|++++
T Consensus 104 ~t~gg~~a~~~~~~~~~~~-~-----~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l 177 (412)
T 1ajs_A 104 QSLGGTGALRIGAEFLARW-Y-----NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDL 177 (412)
T ss_dssp EEEHHHHHHHHHHHHHHHH-S-----SSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHh-C-----cCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHH
Confidence 999999999886544321 0 110001168999999999999999999999 9999984 245899999999999
Q ss_pred hh---cCcEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeeccccccccccc-CCCcccc-cc-CCCCcE
Q 017569 200 DE---NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLEWD-FR-LPLVKS 270 (369)
Q Consensus 200 ~~---~~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~-~~-~~~~Ds 270 (369)
++ ++++++++.|+||||.+. ++++|+++|+++ ++++|+|++|.++...-. .+..... +. ...-..
T Consensus 178 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (412)
T 1ajs_A 178 ENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR------FLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELF 251 (412)
T ss_dssp HHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEE
T ss_pred HhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccCCcccccchHHHHHhccCCcEE
Confidence 86 667888899999999984 577899999999 999999999886543100 0000111 11 112236
Q ss_pred EEEcCccCCCC-CCCeEEEEEe--CCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhc-----HhhHH
Q 017569 271 INVSGHKYGLV-YAGVGWVVWR--TKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----FEVIP 341 (369)
Q Consensus 271 i~~~~hK~l~~-p~g~g~l~~~--~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg-----~~G~~ 341 (369)
+..+.+|.++. +.+.|++++. +++.. ..+.... .+... .+ .+-+.....++..+|+... .+.++
T Consensus 252 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~-~~~~~~~~~~~~~---~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 324 (412)
T 1ajs_A 252 CAQSFSKNFGLYNERVGNLTVVAKEPDSI-LRVLSQMQKIVRV---TW---SNPPAQGARIVARTLSDPELFHEWTGNVK 324 (412)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSSHHHH-HHHHHHHHHHHHT---TT---SSCCSHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred EEEecccccCCCCcceEEEEEecCCHHHH-HHHHHHHHHHHhc---cc---CCCChHHHHHHHHHHcCcchhHHHHHHHH
Confidence 67789998754 4558999882 33211 0110000 00000 00 0111111222223333221 23455
Q ss_pred HH--HhhHHHHHHHHHHHhcC
Q 017569 342 SF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 342 ~~--~~~~~a~~l~~~L~~~g 360 (369)
++ +..++.+++.+.|++.|
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 325 TMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 55 78889999999999876
No 149
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=7.2e-19 Score=173.60 Aligned_cols=215 Identities=11% Similarity=0.066 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~ 171 (369)
..+++++++++++|.+. .++++||++|+..++. +.+ .+++|+++.+.|.++... +
T Consensus 134 ~~~~l~~~la~~~g~~~-------~i~~~sGt~al~~~l~-~~~-------------~Gd~Vi~~~~~y~~~~~~~~~~~ 192 (464)
T 1ibj_A 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVTH-LIK-------------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHT-TSC-------------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEECCCchhHHHHHHHHH
Confidence 67788999999999763 7888899999876654 221 146899999999988753 5
Q ss_pred hhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccc
Q 017569 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (369)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~ 251 (369)
+..|++++.+|++ |+++|++++++++++|++++++||+|.+.|+++|+++|+++ ++++|+|++|..+.
T Consensus 193 ~~~G~~v~~v~~~------d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~------gi~livDea~~~g~ 260 (464)
T 1ibj_A 193 PRSGVVVKRVNTT------KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_dssp GGGTCEEEEECTT------SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTT------TCEEEEECTTTCTT
T ss_pred HHcCCEEEEeCCC------CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 6779999888864 78999999999999999999999999999999999999999 99999999997543
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHH
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~ 329 (369)
. .. +.+ .++|.++.++||++++|.|. |++++++++.. ..+.....+.+. ....+.+|
T Consensus 261 ~--~~---~~~---~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~-~~l~~~~~~~g~------------~~~~~~~~ 319 (464)
T 1ibj_A 261 L--SR---PLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYFLQNSEGS------------GLAPFDCW 319 (464)
T ss_dssp T--CC---GGG---TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHH-HHHHHHHHHTTC------------BCCHHHHH
T ss_pred c--CC---hhh---cCCEEEEECCcccccCCCCCcEEEEEEChHHHH-HHHHHHHHhcCC------------CCCHHHHH
Confidence 2 11 122 26899999999999888765 99988653322 222111111111 11245666
Q ss_pred HHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCCCccc
Q 017569 330 YQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSYFYDT 365 (369)
Q Consensus 330 ~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~~~~~ 365 (369)
+++..+..... .+ +..+++..+.+.|++.+.+.+.
T Consensus 320 a~~~al~~~~~-r~~~~~~~~~~l~~~l~~~~~v~~~ 355 (464)
T 1ibj_A 320 LCLRGIKTMAL-RIEKQQENARKIAMYLSSHPRVKKV 355 (464)
T ss_dssp HHHHHHTTHHH-HHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred HHHhchhhHHH-HHHHHHHHHHHHHHHHHhCCCceEE
Confidence 66666532211 12 5566777777888877644443
No 150
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=1e-18 Score=169.19 Aligned_cols=252 Identities=10% Similarity=0.023 Sum_probs=161.8
Q ss_pred ChHHHHHHHHHHhccCC--CC-----CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~--~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (369)
.++.+.+++.+.+.... .+ +........+++.+++++++++|.+.+ .+++++|++|+..++.++..+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------~v~~~sGs~a~~~a~~~~~~~ 115 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA------NVQPHSGSQANFAVYTALLQP 115 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE------ECCCSSHHHHHHHHHHHHCCT
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc------eeEecCcHHHHHHHHHHhcCC
Confidence 46888888887774322 11 111223456777788999999999751 343456699999888776432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHH---HHHhhhcceeE--EEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCCC
Q 017569 141 WQQKRKEQGKPYDKPNIVTGANVQVCWE---KFARYFEVELK--EVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (369)
Q Consensus 141 ~~~~~~~~g~~~~~~~Vi~s~~~h~s~~---~~~~~~G~~v~--~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (369)
+++|+++.++|.++. ......|..++ .++++. ++.+|+++|++++++ ++++|+++.|+++
T Consensus 116 -------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~~~ 181 (420)
T 3gbx_A 116 -------------GDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDE-SGKIDYDEMAKLAKEHKPKMIIGGFSAYS 181 (420)
T ss_dssp -------------TCEEEEEEEC------------CHHHHSEEEEEEECT-TCSCCHHHHHHHHHHHCCSEEEECCTTCC
T ss_pred -------------CCEEEecchhhcceeccchhhhhcccceeEEeccCCc-cCCcCHHHHHHHHHhcCCeEEEEecCccC
Confidence 478999999997733 22234455444 455564 488999999999987 5899988887775
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC-
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK- 293 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~- 293 (369)
...|+++|.++|+++ |+++|+|++|+.+... ....... ...+|.++.++||++++|.| |+++.++.
T Consensus 182 --~~~~l~~l~~l~~~~------~~~li~De~~~~~~~~--~~~~~~~--~~~~di~~~s~sK~~~g~~g-g~~~~~~~~ 248 (420)
T 3gbx_A 182 --GVVDWAKMREIADSI------GAYLFVDMAHVAGLIA--AGVYPNP--VPHAHVVTTTTHKTLAGPRG-GLILAKGGD 248 (420)
T ss_dssp --SCCCHHHHHHHHHHT------TCEEEEECTTTHHHHH--TTSSCCS--TTTSSEEEEESSGGGCSCSC-EEEEESSCC
T ss_pred --CccCHHHHHHHHHHc------CCEEEEECCcchhcee--cccCCcc--cccCCEEEeecccCCCCCCc-eEEEEcCCc
Confidence 578899999999999 9999999998654431 1111111 23589999999999977776 78776541
Q ss_pred -CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 294 -DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 294 -~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.. ..+.. ..+.+ ..++.+.....++..++..+..+++.++ +..++++++++.|++.|+
T Consensus 249 ~~~~-~~~~~-~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 310 (420)
T 3gbx_A 249 EELY-KKLNS-AVFPS-------AQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGY 310 (420)
T ss_dssp HHHH-HHHHH-HHC-----------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH-HHhhh-hcCCC-------CCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111 11110 00100 0123334445566666666656677666 889999999999998764
No 151
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.80 E-value=4.1e-19 Score=173.19 Aligned_cols=216 Identities=13% Similarity=0.064 Sum_probs=151.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEE---eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHH-----
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWE----- 168 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~-~~h~s~~----- 168 (369)
+++.+.+++++|.+. .++ +++|++||..++.++.++ +++|++++ +.|..+.
T Consensus 77 ~~Le~~lA~l~g~e~-------alv~p~~~sGt~A~~~al~all~p-------------GD~Vl~~~~~~y~~~~~~~g~ 136 (427)
T 3hvy_A 77 DSLDRVYANIFNTES-------AFVRPHFVNGTHAIGAALFGNLRP-------------NDTMMSICGMPYDTLHDIIGM 136 (427)
T ss_dssp HHHHHHHHHHHTCSE-------EEEETTCCSHHHHHHHHHHHTCCT-------------TCEEEECSSSCCGGGHHHHTC
T ss_pred HHHHHHHHHHhCCCc-------eEEeCCCCcHHHHHHHHHHHhcCC-------------CCEEEEeCCCCchhHHHHhcc
Confidence 344456999999985 466 789999998888876542 47899988 7777654
Q ss_pred ------HHHhhhcceeEEEeccCCccccCHHHHHHHHh--hcCcEEEEee----CCCCcccCCCHHHHHHHHHH--hhhc
Q 017569 169 ------KFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEE 234 (369)
Q Consensus 169 ------~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~----~~~~tG~~~~l~~I~~l~~~--~~~~ 234 (369)
..++..|++++.+|. + ++.+|+++|+++++ ++|++|+++. |+||+|.+.|+++|+++|++ +
T Consensus 137 ~~~~~~~~l~~~G~~~~~v~~-~-~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~--- 211 (427)
T 3hvy_A 137 DDSKKVGSLREYGVKYKMVDL-K-DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNE--- 211 (427)
T ss_dssp CTTCCSCCTGGGTCEEEECCC-B-TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCS---
T ss_pred ccchhhhHHHHcCCEEEEecC-C-CCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCC---
Confidence 345567999999988 3 48999999999999 7899999999 99999999999999999999 8
Q ss_pred cCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC--CCeEEEEEeCCCCccccccc--ccCccCCC
Q 017569 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRTKDDLPDELVF--HINYLGSD 310 (369)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p--~g~g~l~~~~~~~~~~~~~~--~~~y~~~~ 310 (369)
++++++|+||+.+.. ... +.. .++|.++.++||+++++ ...|+++.+ ++.. +.+.. ....++..
T Consensus 212 ---g~~livD~a~~~~~~---~~~-p~~---~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li-~~l~~~~~~~~~g~~ 279 (427)
T 3hvy_A 212 ---NVIVFVDNCYGEFVE---EKE-PTD---VGADIIAGSLIKNIGGGIATTGGYIAGK-EEYV-TQATFRVTVPGIGGE 279 (427)
T ss_dssp ---SSEEEEECTTCTTTS---SSC-GGG---GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHSCTTTGGG
T ss_pred ---CCEEEEECCcccccc---CCC-Ccc---cCCeEEEECCcccccccccceEEEEEEC-HHHH-HHHHHHhhcCCcccc
Confidence 999999999986542 111 112 26899999999998763 233777764 3232 22211 11111110
Q ss_pred CCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 311 QPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 311 ~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.+.+.. ..|..++.+.... ..+ +..++|.++++.|+++|+
T Consensus 280 -------~~~~~~---~a~~~~~gl~~~~-~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3hvy_A 280 -------CGSTFG---VMRSLYEGLFMAP-HVTIEAVKGAVFCARIMELAGF 320 (427)
T ss_dssp -------CCCCTT---CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTC
T ss_pred -------cCCCHH---HHHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHhCCC
Confidence 011011 1344444432211 122 899999999999999986
No 152
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.80 E-value=1e-18 Score=166.33 Aligned_cols=250 Identities=10% Similarity=0.006 Sum_probs=167.8
Q ss_pred cccccccC-CChHHHHHHHHHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHH
Q 017569 59 NLASFVTT-WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (369)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~~~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (369)
+|+...+. ++++.+.+++.+.+... ...|. .+...+++ +++++++|+++ ..+++|+||++|+..++
T Consensus 30 ~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr----~~la~~~g~~~-----~~i~~t~g~~~al~~~~ 99 (360)
T 3hdo_A 30 KLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLR----EVAGELYGFDP-----SWIIMANGSDEVLNNLI 99 (360)
T ss_dssp ECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHH----HHHHHHHTCCG-----GGEEEESSHHHHHHHHH
T ss_pred eccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHH----HHHHHHhCcCc-----ceEEEcCCHHHHHHHHH
Confidence 34443333 34578889988888764 33332 23444554 45778888764 35899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.++.++ +++|+++.++|..+...++..|++++.+|++++ +.+ +++++++ ++++++++.++||
T Consensus 100 ~~l~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~--~~l~~~~--~~~~v~i~~p~np 161 (360)
T 3hdo_A 100 RAFAAE-------------GEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD-FRI--AGFPERY--EGKVFFLTTPNAP 161 (360)
T ss_dssp HHHCCT-------------TCEEEEESSSCTHHHHHHHHHTCEEEEECBCTT-SSB--TTCCSSB--CSSEEEEESSCTT
T ss_pred HHHhCC-------------CCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCC-CCH--HHHHhhc--CCCEEEEeCCCCC
Confidence 887432 478999999999999999999999999999764 566 4554433 4678999999999
Q ss_pred cccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEeCC
Q 017569 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (369)
Q Consensus 215 tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~ 293 (369)
+|.+.|+++|.++|+++ ++++++|++|+.+.. .+ ..........+.+..+++|+++ .+.+.|+++.. +
T Consensus 162 tG~~~~~~~l~~l~~~~------~~~li~De~~~~~~~---~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~ 230 (360)
T 3hdo_A 162 LGPSFPLEYIDELARRC------AGMLVLDETYAEFAE---SN-ALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR-P 230 (360)
T ss_dssp TCCCCCHHHHHHHHHHB------SSEEEEECTTGGGSS---CC-CTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC-H
T ss_pred CCCCcCHHHHHHHHHHC------CCEEEEECChHhhCC---cc-hhHHhccCCCEEEEecchHhhcCCccceeeEeeC-H
Confidence 99999999999999999 999999999986421 01 0011112244566778999975 55678988763 2
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.. +.+..... . ++-+.....++..+|+. .+.+.++ +..++.+++.+.|++.|+
T Consensus 231 ~~~-~~~~~~~~-------~----~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~ 286 (360)
T 3hdo_A 231 EVI-AALDKIRD-------H----YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGY 286 (360)
T ss_dssp HHH-HHHHHHSC-------S----CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHHHhCC-------C----CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 222 22211000 1 12222223333333432 3345555 788899999999988753
No 153
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.80 E-value=3.4e-18 Score=166.81 Aligned_cols=280 Identities=11% Similarity=-0.007 Sum_probs=180.4
Q ss_pred HHHHHHHHHHhhhhc-CCCCccccccccC-CChHHHHHHHHHHhcc-----CCCCCCCCcchHHHHHHHHHHHHHHhCCC
Q 017569 39 KEAAYQVINDELMLD-GNPRLNLASFVTT-WMEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~-~~p~~~l~~~~~~-~~~~~v~~~~~~~~~~-----n~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (369)
.+.+.+........+ +...++|+.+.+. +.++.+.+++.+++.. ....|....+..++++++.+|+.+.++.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~ 118 (432)
T 3ei9_A 39 FPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIG 118 (432)
T ss_dssp HHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCC
Confidence 444545444433333 3344677766554 3457788888877653 22334444577899999888887645555
Q ss_pred CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcc------------eeE
Q 017569 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV------------ELK 179 (369)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~------------~v~ 179 (369)
+ ...++|+|+++++.. +.++.+ .++.|+++.++|.++...++..|. +++
T Consensus 119 ~-----~~i~~t~G~~~al~~-l~~l~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 179 (432)
T 3ei9_A 119 D-----DDVFVSDGAKCDISR-LQVMFG-------------SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIE 179 (432)
T ss_dssp G-----GGEEEESCHHHHHHH-HHHHHC-------------TTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCE
T ss_pred c-----ceEEECCChHHHHHH-HHHHcC-------------CCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceE
Confidence 3 458999999999975 344332 147899999999999999988884 688
Q ss_pred EEeccCC-ccccCHHHHHHHHhhcCcEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeeccccccccccc
Q 017569 180 EVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (369)
Q Consensus 180 ~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (369)
.+|++.+ ++..|+++ .+++++|++++|+||||.+- ++++|+++|+++ ++++++|++|+.+...-
T Consensus 180 ~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~------~~~li~Dea~~~~~~~~- 247 (432)
T 3ei9_A 180 YMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN------GSIIVYDSAYAMYMSDD- 247 (432)
T ss_dssp EEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCSS-
T ss_pred EeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEccchHhhccCC-
Confidence 8888642 34555432 35789999999999999985 477788889999 99999999999765420
Q ss_pred CCCcccccc-CCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCc------ccccccccCccCCCCCCccccCCcchhHHHH
Q 017569 256 YPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDL------PDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (369)
Q Consensus 256 ~~~~~~~~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~------~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~ 327 (369)
.+.....+. ....+.+..+++|.++ .+.++|++++++.... ...+....... -.+...+.
T Consensus 248 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 315 (432)
T 3ei9_A 248 NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTC------------FNGASNIS 315 (432)
T ss_dssp CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHS------------CCCSCHHH
T ss_pred CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccc------------cCCCCHHH
Confidence 010001111 1245677888999985 6677899987654210 11110000000 00112445
Q ss_pred HHHHHHHhcHh---hHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 328 QYYQFIRLGFE---VIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 328 ~~~~l~~lg~~---G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
+.+++..+..+ .+.++ +..++.+++++.|++.|+
T Consensus 316 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 354 (432)
T 3ei9_A 316 QAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGY 354 (432)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 55555555433 34444 788899999999998764
No 154
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.80 E-value=5.3e-18 Score=165.32 Aligned_cols=241 Identities=12% Similarity=-0.016 Sum_probs=164.3
Q ss_pred CCCCCcchHHHHHHHHHHHHHHhCCCCCC-CC---CCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC
Q 017569 86 DMDEYPVTTELQNRCVNMIAHLFNTPVAD-DK---TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA 161 (369)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~-~~---~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~ 161 (369)
.|....+..++++++.+++++.+|.+.++ +. ...+++|+|+++|+.+++.++.++ +++|+++.
T Consensus 73 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-------------gd~Vlv~~ 139 (425)
T 2r2n_A 73 QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINP-------------GDNVLLDE 139 (425)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCT-------------TCEEEEES
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCC-------------CCEEEEeC
Confidence 34455678899999999999999987411 00 125899999999999998887542 47899999
Q ss_pred CCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh------------hcCcEEEE-eeCCCCcccCCCHH---HHH
Q 017569 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD------------ENTICVAA-ILGSTLTGEFEDVK---LLH 225 (369)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~------------~~~~~v~~-~~~~~~tG~~~~l~---~I~ 225 (369)
++|..+...++..|++++.+|++++ .+|+++|+++++ +++++|++ .+++||||.+.+.+ +|+
T Consensus 140 p~y~~~~~~~~~~g~~~~~v~~~~~--~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~ 217 (425)
T 2r2n_A 140 PAYSGTLQSLHPLGCNIINVASDES--GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIY 217 (425)
T ss_dssp SCCHHHHHHHGGGTCEEEEECEETT--EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred CCcHHHHHHHHHcCCEEEEeCcCCC--CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHH
Confidence 9999999999999999999998764 489999999997 35788766 68999999997655 999
Q ss_pred HHHHHhhhccCCCceEEeecccccccccccCCCc-cccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccccccc
Q 017569 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI 304 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~ 304 (369)
++|+++ ++++++|++|+.+.+.- .+.. -..+...+.+.+..+++|+++.+...|+++++++ .. ..+....
T Consensus 218 ~~a~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~-~~l~~~~ 288 (425)
T 2r2n_A 218 ELARKY------DFLIIEDDPYYFLQFNK-FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP-LI-ERVILHI 288 (425)
T ss_dssp HHHHHT------TCEEEEECTTGGGBSSS-SCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HH-HHHHHHH
T ss_pred HHHHHc------CCEEEEECCcccccCCC-CCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH-HH-HHHHHHH
Confidence 999999 99999999998754310 0100 0112222345667789999974556899988642 22 2221100
Q ss_pred CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhH----HHH--HhhHHHHHHHHHHHhc
Q 017569 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVI----PSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 305 ~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~----~~~--~~~~~a~~l~~~L~~~ 359 (369)
... . ++-+.....++..+|+.++.+++ +++ +..++.+++.+.|++.
T Consensus 289 ~~~-----~----~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (425)
T 2r2n_A 289 QVS-----T----LHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW 340 (425)
T ss_dssp HTT-----T----CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHh-----c----CCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 12222222333344444433333 333 5667778888888874
No 155
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.80 E-value=7.3e-19 Score=170.59 Aligned_cols=216 Identities=14% Similarity=0.035 Sum_probs=154.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK- 169 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~- 169 (369)
|...++|+. +++++|.+. .+++++|++|+..++. +.. .+++|+++.+.|.+...
T Consensus 67 p~~~~l~~~----la~~~g~~~-------~i~~~sG~~ai~~~~~-l~~-------------~gd~Vl~~~~~y~~~~~~ 121 (403)
T 3cog_A 67 PTRNCLEKA----VAALDGAKY-------CLAFASGLAATVTITH-LLK-------------AGDQIICMDDVYGGTNRY 121 (403)
T ss_dssp HHHHHHHHH----HHHHHTCSE-------EEEESCHHHHHHHHHT-TSC-------------TTCEEEEESSCCHHHHHH
T ss_pred chHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEeCCCcchHHHH
Confidence 444555554 788888763 5666677899988877 432 14689999999987433
Q ss_pred ---HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCC-ceEEeec
Q 017569 170 ---FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVDA 245 (369)
Q Consensus 170 ---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~-~~l~vD~ 245 (369)
.++..|++++.+|++ |+++|++++++++++|++++++||+|.+.|+++|+++|+++ + +++++|+
T Consensus 122 ~~~~~~~~G~~v~~v~~~------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~------g~~~livD~ 189 (403)
T 3cog_A 122 FRQVASEFGLKISFVDCS------KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKH------GDIILVVDN 189 (403)
T ss_dssp HHHTGGGGTCEEEEECTT------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSS------SCCEEEEEC
T ss_pred HHHHHHHcCCEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHc------CCCEEEEEC
Confidence 346789999888865 78999999999999999999999999999999999999999 9 9999999
Q ss_pred ccccccccccCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
+|+.+.. .. +.+ .++|.++.++||++++|.+ .|+++.++++.. ..+.......+ ++.
T Consensus 190 ~~~~~~~--~~---~~~---~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~-~~l~~~~~~~g---------~~~--- 248 (403)
T 3cog_A 190 TFMSPYF--QR---PLA---LGADISMYSATKYMNGHSDVVMGLVSVNCESLH-NRLRFLQNSLG---------AVP--- 248 (403)
T ss_dssp TTTCTTT--CC---TTT---TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHH-HHHHHHHHHHC---------CCC---
T ss_pred CCccccc--CC---ccc---cCCeEEEEcChhhccCCCCCeEEEEEECcHHHH-HHHHHHHHhcC---------CCC---
Confidence 9987543 11 122 3689999999999988876 488888654332 12111000011 111
Q ss_pred HHHHHHHHHHHhcHhhHHH-H-HhhHHHHHHHHHHHhcCCCcccc
Q 017569 324 QIIAQYYQFIRLGFEVIPS-F-CCVDHKKLSSFFVIHSSYFYDTL 366 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~-~-~~~~~a~~l~~~L~~~g~~~~~~ 366 (369)
..+.+|++++.+.. +.. + +..+++..+++.|++.+.+.+.+
T Consensus 249 ~~~~~~~~~~~l~~--l~~r~~~~~~n~~~l~~~l~~~~~v~~~~ 291 (403)
T 3cog_A 249 SPIDCYLCNRGLKT--LHVRMEKHFKNGMAVAQFLESNPWVEKVI 291 (403)
T ss_dssp CHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred CHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 24566666665542 332 3 77788889999998886655543
No 156
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.80 E-value=1.7e-18 Score=164.96 Aligned_cols=220 Identities=12% Similarity=-0.009 Sum_probs=157.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHH
Q 017569 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKF 170 (369)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~-~~Vi~s~~~h~s~~~~ 170 (369)
...+++++ +++++|+++ ...++|+|+++++..++.++.++ + ++|+++.++|..+...
T Consensus 59 ~~~~lr~~----la~~~~~~~-----~~v~~~~G~~~ai~~~~~~~~~~-------------g~d~Vl~~~p~~~~~~~~ 116 (356)
T 1fg7_A 59 QPKAVIEN----YAQYAGVKP-----EQVLVSRGADEGIELLIRAFCEP-------------GKDAILYCPPTYGMYSVS 116 (356)
T ss_dssp SCHHHHHH----HHHHHTSCG-----GGEEEESHHHHHHHHHHHHHCCT-------------TTCEEEECSSSCTHHHHH
T ss_pred cHHHHHHH----HHHHhCCCh-----HHEEEcCCHHHHHHHHHHHHhCC-------------CCCEEEEeCCChHHHHHH
Confidence 34555555 777778875 24899999999999988887432 4 6899999999999999
Q ss_pred HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH--hhhccCCCceEEeecccc
Q 017569 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASG 248 (369)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~--~~~~~~~~~~l~vD~a~~ 248 (369)
++..|++++.+|+++ ++.+|+++|+++++ ++++|++++|+||||.+.|.++|.++++. + ++++++|++|+
T Consensus 117 ~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~------~~~li~De~~~ 188 (356)
T 1fg7_A 117 AETIGVECRTVPTLD-NWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG------KAIVVADEAYI 188 (356)
T ss_dssp HHHHTCEEEECCCCT-TSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT------TCEEEEECTTG
T ss_pred HHHcCCEEEEeeCCC-CCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC------CCEEEEEccch
Confidence 999999999999875 47899999999998 88999999999999999776555555444 7 99999999998
Q ss_pred cccccccCCCccccc-cCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHH
Q 017569 249 GFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQII 326 (369)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l 326 (369)
.+.. ... ...+ .....+.+..+.+|+++ .+.+.|++++++ +.. ..+... . ..+ + ...+
T Consensus 189 ~~~~---~~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~----~---~~~----~---~~~~ 248 (356)
T 1fg7_A 189 EFCP---QAS-LAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE-EVI-NLLMKV----I---APY----P---LSTP 248 (356)
T ss_dssp GGSG---GGC-SGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH-HHH-HHHHHH----S---CSS----C---SCHH
T ss_pred hhcC---CCc-HHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH-HHH-HHHHHh----c---CCC----C---CCHH
Confidence 7541 010 0111 22245677788999985 455689998843 222 222110 0 011 1 1245
Q ss_pred HHHHHHHHhcHhh---HHHH--HhhHHHHHHHHHHHhcCC
Q 017569 327 AQYYQFIRLGFEV---IPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 327 ~~~~~l~~lg~~G---~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+++++..+...+ +++. +..++.+++.+.|++.|.
T Consensus 249 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 288 (356)
T 1fg7_A 249 VADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPC 288 (356)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5667777776656 4444 778888999999998873
No 157
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.80 E-value=9.7e-19 Score=164.50 Aligned_cols=153 Identities=22% Similarity=0.148 Sum_probs=124.6
Q ss_pred HHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----hhhc
Q 017569 100 CVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYFE 175 (369)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~----~~~G 175 (369)
+++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+ +..|
T Consensus 3 l~~~la~~~g~~~-------~i~~~sG~~a~~~~~~~~~~~-------------g~~v~~~~~~~~~~~~~~~~~~~~~g 62 (331)
T 1pff_A 3 LEGKIAKLEHAEA-------CAATASGMGAIAASVWTFLKA-------------GDHLISDDCLYGCTHALFEHQLRKFG 62 (331)
T ss_dssp HHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCCcchHHHHHHHHHHhcC
Confidence 4556899999863 566777799999988876331 468999999999877665 4478
Q ss_pred ceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHH-hhhccCCCceEEeecccccccccc
Q 017569 176 VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~-~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
++++.+|. +|+++|++++++++++|++++++||+|.+.|+++|.++|++ + ++++|+|++|+.+...
T Consensus 63 ~~~~~~~~------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~------~~~li~D~a~~~~~~~- 129 (331)
T 1pff_A 63 VEVDFIDM------AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQK------DILVIVDNTFASPILT- 129 (331)
T ss_dssp CEEEEECT------TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSS------SCEEEEECTTTHHHHC-
T ss_pred CEEEEeCC------CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhc------CCEEEEECCCcccccC-
Confidence 88888875 36789999999889999999999999999999999999999 9 9999999999865541
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCCC--eEEEEEeC
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~g~l~~~~ 292 (369)
.+ .+ .++|.++.++||++++|.+ .|+++.++
T Consensus 130 -~~---~~---~~~d~~~~s~~K~~~~~~~r~~G~~~~~~ 162 (331)
T 1pff_A 130 -NP---LD---LGVDIVVHSATKYINGHTDVVAGLVCSRA 162 (331)
T ss_dssp -CG---GG---GTCSEEEEETTTTTSSSSSCCCEEEEECH
T ss_pred -Ch---hh---cCCcEEEEECccccCCCCCceEEEEEeCc
Confidence 11 11 3689999999999988876 78888764
No 158
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=2.6e-18 Score=169.28 Aligned_cols=256 Identities=10% Similarity=-0.016 Sum_probs=156.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
+.+.+++.+++......|...++..++++ ++++++|.+. +++|+||++|+.+++.++++.+. .+
T Consensus 55 ~~v~~a~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~~-------v~~t~ggt~A~~~al~~~~~~~~----~~- 118 (467)
T 1ax4_A 55 NAMSDHQWAAMITGDEAYAGSRNYYDLKD----KAKELFNYDY-------IIPAHQGRGAENILFPVLLKYKQ----KE- 118 (467)
T ss_dssp CCEEHHHHHHHHTCCCCSSSCHHHHHHHH----HHHHHHCCCE-------EEEESSHHHHHHHHHHHHHHHHH----HT-
T ss_pred HHHHHHHHHHHhhcccccccCccHHHHHH----HHHHHcCCCc-------EEEcCCcHHHHHHHHHHHHHhhc----cC-
Confidence 44556555555443334444455555554 4777788753 89999999999999999876211 01
Q ss_pred CCCCCCe---EEecCCCcchHHHHHhhhcceeEEEeccC---------CccccCHHHHHHHHhh----cCcEEEEeeCCC
Q 017569 150 KPYDKPN---IVTGANVQVCWEKFARYFEVELKEVKLEE---------GYYVMNPVKAVELVDE----NTICVAAILGST 213 (369)
Q Consensus 150 ~~~~~~~---Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~---------~~~~~d~~~L~~~i~~----~~~~v~~~~~~~ 213 (369)
++. |+++.+.|..+..++...|..++.++.+. .++.+|+++|++++++ ++++|+++.++|
T Consensus 119 ----Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~n 194 (467)
T 1ax4_A 119 ----GKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCN 194 (467)
T ss_dssp ----TCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBT
T ss_pred ----CCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEecccc
Confidence 244 77884444556777788898887765431 1367999999999985 688999999999
Q ss_pred Cc-ccC---CCHHHHHHHHHHhhhccCCCceEEeeccccc-ccc-------cccCCCcccccc---CCCCcEEEEcCccC
Q 017569 214 LT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGG-FIA-------PFLYPDLEWDFR---LPLVKSINVSGHKY 278 (369)
Q Consensus 214 ~t-G~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~-~~~-------~~~~~~~~~~~~---~~~~Dsi~~~~hK~ 278 (369)
|+ |.+ +++++|+++|+++ |+|+|+|+++.. +.. .+. +....++. ...+|+++.+.||+
T Consensus 195 p~gG~~~~~~~l~~i~~la~~~------gi~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~s~sK~ 267 (467)
T 1ax4_A 195 SAGGQPVSMSNLKEVYEIAKQH------GIFVVMDSARFCENAYFIKARDPKYK-NATIKEVIFDMYKYADALTMSAKKD 267 (467)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHH------TCCEEEECTTHHHHHHHHHHHCGGGT-TCCHHHHHHHHGGGCSEEEEETTST
T ss_pred CCCccCCChhHHHHHHHHHHHc------CCEEEEEchhhhhcchhccccccccC-CCchhhhhhhhccccceEEEecccc
Confidence 99 775 5688999999999 999999998653 111 011 10000110 13478999999999
Q ss_pred CCCCCCeEEEEEeCC-CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHH
Q 017569 279 GLVYAGVGWVVWRTK-DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFV 356 (369)
Q Consensus 279 l~~p~g~g~l~~~~~-~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L 356 (369)
++.|.| |+++.+++ +... .+.......++. .++ ++.+.....++..++..+-.+ ..+ +..++++++++.|
T Consensus 268 ~g~~~G-g~~~~~d~~~l~~-~~~~~~~~~~~~-~~~---~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~l~~~L 339 (467)
T 1ax4_A 268 PLLNIG-GLVAIRDNEEIFT-LARQRCVPMEGF-VTY---GGLAGRDMAAMVQGLEEGTEE--EYLHYRIGQVKYLGDRL 339 (467)
T ss_dssp TCCSSC-EEEEESSCHHHHH-HHHHHHHHHTCS-TTT---TTCCHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCcc-eEEEeCCHHHHHH-HHHhhccccccc-ccc---CCccchHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHH
Confidence 977655 66666544 4332 211111111111 111 233333223333345443221 122 4457788999999
Q ss_pred HhcC
Q 017569 357 IHSS 360 (369)
Q Consensus 357 ~~~g 360 (369)
++.|
T Consensus 340 ~~~~ 343 (467)
T 1ax4_A 340 REAG 343 (467)
T ss_dssp HHTT
T ss_pred HhCC
Confidence 8744
No 159
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=6.2e-19 Score=180.99 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=163.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhccee
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v 178 (369)
++.+.+++++|++. ...+++|++.||..++.++.++ +++|+++.+.|.|+..++.+.|+.+
T Consensus 199 eaE~~lA~~fGa~~------a~~v~nGts~An~~ai~al~~p-------------GD~VLv~r~~H~S~~~~l~lsGa~p 259 (715)
T 3n75_A 199 EAEQYIARVFNADR------SYMVTNGTSTANKIVGMYSAPA-------------GSTILIDRNCHKSLTHLMMMSDVTP 259 (715)
T ss_dssp HHHHHHHHHHTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHSCCEE
T ss_pred HHHHHHHHHhCCCC------ceEECcHHHHHHHHHHHHhCCC-------------CCEEEECCCccHHHHHHHHHcCCEE
Confidence 45556999999985 2455666689998888887543 5799999999999999999999999
Q ss_pred EEEeccCCccc----c-----CHHHHHHHHhhc--Cc---EEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEee
Q 017569 179 KEVKLEEGYYV----M-----NPVKAVELVDEN--TI---CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (369)
Q Consensus 179 ~~v~~~~~~~~----~-----d~~~L~~~i~~~--~~---~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD 244 (369)
++++.+.+++. + |+++|++++++. ++ ++++++| |++|.+.|+++|+++|+++ + +++|
T Consensus 260 v~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~------~--livD 330 (715)
T 3n75_A 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK------S--IHFD 330 (715)
T ss_dssp EEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS------E--EEEE
T ss_pred EEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC------c--EEEc
Confidence 99987543343 3 899999999863 33 7889999 8999999999999999765 4 7999
Q ss_pred cccccccccccCCCcc--ccccC-CCCcEE---EEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccC
Q 017569 245 AASGGFIAPFLYPDLE--WDFRL-PLVKSI---NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (369)
Q Consensus 245 ~a~~~~~~~~~~~~~~--~~~~~-~~~Dsi---~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~ 318 (369)
+||+.+.. +.+..+ ..+.. ..+|.+ +.++||++.++.++|++++++. .....+.....+... .
T Consensus 331 EAH~~~~~--f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~-i~~~~~~~~~~~~~S--------T 399 (715)
T 3n75_A 331 SAWVPYTN--FSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHTT--------T 399 (715)
T ss_dssp CTTCTTGG--GSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC-CCHHHHHHHHHHTSC--------S
T ss_pred cccccccc--cCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch-hhHHHHHHHHHhhcC--------C
Confidence 99987652 122111 11111 136766 8899999999888899998865 211112111122211 3
Q ss_pred CcchhHHHHHHHHHHHhcH-hhHHHH-HhhHHHHHHHHHHHhcC
Q 017569 319 SKGSSQIIAQYYQFIRLGF-EVIPSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 319 tr~~~~~l~~~~~l~~lg~-~G~~~~-~~~~~a~~l~~~L~~~g 360 (369)
|.+....+++-++++.+.. +|-..+ +..+++++++++|++.+
T Consensus 400 Spsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 400 SPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555556777788888864 676666 99999999999998864
No 160
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.79 E-value=3.1e-19 Score=174.16 Aligned_cols=208 Identities=11% Similarity=-0.011 Sum_probs=151.5
Q ss_pred cccccccc-CC-ChHHH--HHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHh-CCCCCCCCCCC---eEEeCCchH
Q 017569 58 LNLASFVT-TW-MEPEC--DKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLF-NTPVADDKTAV---GVGTVGSSE 128 (369)
Q Consensus 58 ~~l~~~~~-~~-~~~~v--~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~-g~~~~~~~~~~---~~~t~Ggt~ 128 (369)
++|+.+.+ .. .++.+ .+++.+.++. ....|....+..++++++.+++.+.. ++++ .. +++|+||++
T Consensus 50 i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~~~i~~t~g~~~ 124 (430)
T 2x5f_A 50 YNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSI-----DNMSRPIVTNALTH 124 (430)
T ss_dssp EECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCG-----GGBCCCEEESHHHH
T ss_pred EEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCC-----CccceEEEcCCchH
Confidence 45555544 22 23333 4554444543 33444444578889999888887653 3332 34 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhh-hcceeEEEeccCCccccCHHHHHHHHhh---cCc
Q 017569 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY-FEVELKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~-~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (369)
|+.+++.++.++ +++|+++.++|..+...++. .|++++.+|++++++.+|+++|++++++ +++
T Consensus 125 al~~~~~~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 191 (430)
T 2x5f_A 125 GLSLVGDLFVNQ-------------DDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKV 191 (430)
T ss_dssp HHHHHHHHHCCT-------------TCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEE
T ss_pred HHHHHHHHHhCC-------------CCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCE
Confidence 999998887432 46899999999999999999 9999999998763378999999999988 788
Q ss_pred EEEEeeCCCCcccCCC---HHHHHHHHHH-----hhhccCCCceEEeecccccccccccCCCcc-c-ccc-CCCC---cE
Q 017569 205 CVAAILGSTLTGEFED---VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDLE-W-DFR-LPLV---KS 270 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~---l~~I~~l~~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~~-~~~~---Ds 270 (369)
+|+++.|+||||.+.+ +++|+++|++ + ++++++|++|+.+.... .+... . .+. .... +.
T Consensus 192 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 264 (430)
T 2x5f_A 192 IMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGT------KVIAVVDDAYYGLFYED-VYTQSLFTALTNLHSNAILPI 264 (430)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTC------EEEEEEECTTTTCBCSS-SCCSCHHHHHHTTCCTTEEEE
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccC------CEEEEEehhcccccCCc-ccchHHHHHHhhccCCcceEE
Confidence 9999999999999977 8999999999 9 99999999998754310 00011 1 222 1233 55
Q ss_pred EEEcCccCCC-CCCCeEEEEE
Q 017569 271 INVSGHKYGL-VYAGVGWVVW 290 (369)
Q Consensus 271 i~~~~hK~l~-~p~g~g~l~~ 290 (369)
+..+++|+++ .+.+.|++++
T Consensus 265 ~~~s~sK~~~~~G~riG~~~~ 285 (430)
T 2x5f_A 265 RLDGATKEFFAWGFRVGFMTF 285 (430)
T ss_dssp EEEEHHHHTTCGGGCCEEEEE
T ss_pred EEEecccCCCCCCCCeEEEEE
Confidence 6778999985 4456799988
No 161
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=3.7e-18 Score=167.78 Aligned_cols=251 Identities=8% Similarity=-0.052 Sum_probs=165.7
Q ss_pred CChHHHHHHHHHHhccCC-CCCC------CCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY-VDMD------EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~-~~~~------~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (369)
+.++.+.+++.+.+.+.. ..+. .......+|+..++++++++|.+. ..+++++|++|+..++.++++
T Consensus 56 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~------~~v~~~sGs~a~~~a~~~~~~ 129 (447)
T 3h7f_A 56 FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF------ANVQPHSGAQANAAVLHALMS 129 (447)
T ss_dssp CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc------eEEEeCCHHHHHHHHHHHhcC
Confidence 446888888887774221 1111 112233445444489999999985 133378899999988888754
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcch-HHHH--Hhhhcc--eeEEEeccCCccccCHHHHHHHHhh-cCcEEEEeeCCC
Q 017569 140 KWQQKRKEQGKPYDKPNIVTGANVQVC-WEKF--ARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGST 213 (369)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Vi~s~~~h~s-~~~~--~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~ 213 (369)
+ +++|+++.++|.+ +... ....|. .+..++++++++.+|+++|++++.+ ++++|+++.+++
T Consensus 130 ~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~ 196 (447)
T 3h7f_A 130 P-------------GERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAY 196 (447)
T ss_dssp T-------------TCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSC
T ss_pred C-------------CCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCC
Confidence 2 4789999988866 2221 223343 4555666655589999999999964 788888888888
Q ss_pred CcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 214 ~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
+++. ++++|+++|+++ ++++|+|++|..+.. ........ ..++|.++.++||++.+|.+ |+++.++
T Consensus 197 ~~~~--~l~~i~~l~~~~------g~lli~Dea~~~g~~--~~g~~~~~--~~~~di~~~s~sK~l~G~~g-G~i~~~~- 262 (447)
T 3h7f_A 197 PRVL--DFAAFRSIADEV------GAKLLVDMAHFAGLV--AAGLHPSP--VPHADVVSTTVHKTLGGGRS-GLIVGKQ- 262 (447)
T ss_dssp CSCC--CHHHHHHHHHHH------TCEEEEECTTTHHHH--HTTSSCCS--TTTCSEEEEESSGGGCCCSC-EEEEECG-
T ss_pred CCcc--CHHHHHHHHHHc------CCEEEEECCchhhhh--cCCCCCCC--CCCCcEEEecCCcCCCCCCe-EEEEECH-
Confidence 8776 999999999999 999999999754432 11111111 24689999999999977766 8887653
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
+.. ..+... .+ .. ..++.......++.+++..+..++++++ +..++++++++.|++.
T Consensus 263 ~~~-~~l~~~-~~-~~------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 263 QYA-KAINSA-VF-PG------QQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp GGH-HHHHHH-HT-TT------TCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred HHH-HHHhhh-cC-Cc------ccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222 221110 00 00 1123333335566666776655566666 8999999999999887
No 162
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.79 E-value=5.4e-18 Score=163.60 Aligned_cols=247 Identities=12% Similarity=-0.029 Sum_probs=164.9
Q ss_pred hHHHHHHHHHHhccCC---CCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHH
Q 017569 69 EPECDKLVMASINKNY---VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (369)
+|.+.+++.+++.... ..+....+......++++.+++++|.+. ..++ ++|++++..++.++...
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~------~i~~-~sG~~a~~~~~~~l~~~----- 129 (401)
T 2bwn_A 62 HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEA------ALVF-SSAYNANDATLSTLRVL----- 129 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSE------EEEE-SCHHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc------EEEE-CCcHHHHHHHHHHHhcC-----
Confidence 4568888887775421 1111111122333456666888888742 2455 45555877776654321
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcccCCCH
Q 017569 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDV 221 (369)
Q Consensus 146 ~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~l 221 (369)
. .+++|+++.++|.++...++..|++++.+|.+ |+++|+++++ +++++|++++++||||.+.|+
T Consensus 130 -~-----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l 197 (401)
T 2bwn_A 130 -F-----PGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI 197 (401)
T ss_dssp -S-----TTCEEEEETTCCHHHHHHHHHSCCCEEEECTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred -C-----CCCEEEECchhhHHHHHHHHHcCCeEEEEcCC------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence 0 13689999999999999999999999999864 6888998887 578999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-cc--cccC-CCCcEEEEcCccCCCCCCCeEEEEEeCCCCcc
Q 017569 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW--DFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (369)
Q Consensus 222 ~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~--~~~~-~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~ 297 (369)
++|.++|+++ ++++|+|++|+.+.+ .+.. .+ .... ...|.+..+.+|.++.| | |+++.+ ++..
T Consensus 198 ~~i~~l~~~~------~~~li~Dea~~~g~~---~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-G~~~~~-~~~~- 264 (401)
T 2bwn_A 198 KEICDIAEEF------GALTYIDEVHAVGMY---GPRGAGVAERDGLMHRIDIFNGTLAKAYGVF-G-GYIAAS-ARMV- 264 (401)
T ss_dssp HHHHHHHHHH------TCEEEEECTTTTTTS---STTSCCHHHHHTCGGGCSEEEEESSSTTCSC-C-EEEEEC-HHHH-
T ss_pred HHHHHHHHHc------CCEEEEecccccccc---CCCCceeeeccCccccCcEEEeechhhccCC-C-CEEecC-HHHH-
Confidence 9999999999 999999999985433 1110 00 1111 24578888999998754 3 777663 2221
Q ss_pred ccccc-ccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcC
Q 017569 298 DELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 298 ~~~~~-~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g 360 (369)
..+.. ...+... .++.+ ...+++..+++.+...|+.++ +..++++++.+.|++.|
T Consensus 265 ~~l~~~~~~~~~~-------~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 322 (401)
T 2bwn_A 265 DAVRSYAPGFIFS-------TSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG 322 (401)
T ss_dssp HHHHHHCHHHHTS-------BCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCcCceec-------CCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC
Confidence 12111 0111100 12322 345666778888776677776 88999999999998875
No 163
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.79 E-value=3.3e-18 Score=164.63 Aligned_cols=212 Identities=15% Similarity=0.012 Sum_probs=150.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----Hhhh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYF 174 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~----~~~~ 174 (369)
++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.+.... ++..
T Consensus 56 ~l~~~la~~~~~~~-------~i~~~sGt~a~~~~~~~~~~~-------------g~~vl~~~~~~~~~~~~~~~~~~~~ 115 (386)
T 1cs1_A 56 VVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_dssp HHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcHhHHHHHHHHHHhc
Confidence 44555888888762 455566699999988876331 46899999999874443 4667
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (369)
|++++.+|.+ |+++|++++++++++|+++.++||+|.+.|+++|.++|+++ ++++|+|++|+.+..+
T Consensus 116 g~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~- 182 (386)
T 1cs1_A 116 CYRVLFVDQG------DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREV------GAVSVVDNTFLSPALQ- 182 (386)
T ss_dssp SCEEEEECTT------CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTCTTTC-
T ss_pred CCEEEEeCCC------CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCcccccC-
Confidence 8888888763 78999999999999999999999999999999999999999 9999999999876541
Q ss_pred cCCCccccccCCCCcEEEEcCccCCCCCCCe--EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHH
Q 017569 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (369)
Q Consensus 255 ~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l 332 (369)
. ... .++|.++.++||++++|.+. |++++++++.. ..+.......+ ++. ..+.+|+++
T Consensus 183 -~---~~~---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~-~~l~~~~~~~~---------~~~---~~~~~~~~~ 242 (386)
T 1cs1_A 183 -N---PLA---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNIG---------VTG---GAFDSYLLL 242 (386)
T ss_dssp -C---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHH-HHHHHHHHHHT---------CBC---CHHHHHHHH
T ss_pred -C---ccc---cCceEEEEcCcccccCCCCceeEEEEeCcHHHH-HHHHHHHHhcC---------CCC---CHHHHHHHH
Confidence 1 111 36899999999999888764 88888653222 12111000000 111 233445444
Q ss_pred HHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCccc
Q 017569 333 IRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYDT 365 (369)
Q Consensus 333 ~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~~ 365 (369)
..+. .+... +..++++++.+.|++++.+.+.
T Consensus 243 ~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~l~~~ 275 (386)
T 1cs1_A 243 RGLR--TLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_dssp HHHT--THHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred hccc--HHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 4432 23333 6778889999999887765443
No 164
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.79 E-value=1.3e-18 Score=167.58 Aligned_cols=260 Identities=9% Similarity=-0.050 Sum_probs=170.6
Q ss_pred CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEE--eCCchHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVG--TVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~--t~Ggt~a~~~al~~~~~~~ 141 (369)
++++.+.+++.+.++. ....|....+..++++++.+++.+..+. ++ ..+++ |+||++|+.+++.++...
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~-----~~v~~~~~~g~~~a~~~~~~~~~~~- 117 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIND-----KRARTAQTPGGTGALRVAADFLAKN- 117 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEESHHHHHHHHHHHHHHHH-
T ss_pred cCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCcccc-----ccEEEEecccchhhHHHHHHHHHHh-
Confidence 3457788888877654 2334545567888888877776443221 22 23666 999999999988776431
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhh---cCcEEEEeeCCCCccc
Q 017569 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE---NTICVAAILGSTLTGE 217 (369)
Q Consensus 142 ~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~ 217 (369)
..+++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++ ++++++++.++||||.
T Consensus 118 ----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~ 187 (396)
T 2q7w_A 118 ----------TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGI 187 (396)
T ss_dssp ----------SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCC
T ss_pred ----------CCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 0146899999999999999999999999999852 3589999999999975 3677888999999999
Q ss_pred CC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-cc-CCCCcEEEEcCccCCC-CCCCeEEEEE-
Q 017569 218 FE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGL-VYAGVGWVVW- 290 (369)
Q Consensus 218 ~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Dsi~~~~hK~l~-~p~g~g~l~~- 290 (369)
+. ++++|+++|+++ ++++++|++|+++....-.+..... +. ...-+.++.+.+|.++ .+.+.|++++
T Consensus 188 ~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~ 261 (396)
T 2q7w_A 188 DPTLEQWQTLAQLSVEK------GWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLV 261 (396)
T ss_dssp CCCHHHHHHHHHHHHHH------TCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHC------CCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEE
Confidence 85 467899999999 9999999999875431000000111 11 1123456778999985 3455799986
Q ss_pred -eCCCC---cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH--------hhHHHH--HhhHHHHHHHHHH
Q 017569 291 -RTKDD---LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF--------EVIPSF--CCVDHKKLSSFFV 356 (369)
Q Consensus 291 -~~~~~---~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~--------~G~~~~--~~~~~a~~l~~~L 356 (369)
.+++. +...+.. .... .+ ++. ..+.++++...+.. +.++++ +..++.+++.+.|
T Consensus 262 ~~~~~~~~~~~~~~~~---~~~~---~~---~~~---~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (396)
T 2q7w_A 262 AADSETVDRAFSQMKA---AIRA---NY---SNP---PAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTL 329 (396)
T ss_dssp CSSHHHHHHHHHHHHH---HHHT---TT---SSC---CHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH---HHhh---cc---CCC---CcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23311 1111110 0000 00 111 13344444444422 345555 7888999999999
Q ss_pred HhcC
Q 017569 357 IHSS 360 (369)
Q Consensus 357 ~~~g 360 (369)
++.|
T Consensus 330 ~~~~ 333 (396)
T 2q7w_A 330 QEKG 333 (396)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 9876
No 165
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.79 E-value=4.8e-18 Score=166.99 Aligned_cols=218 Identities=12% Similarity=0.044 Sum_probs=146.4
Q ss_pred hhcCCCC-cccccccc-C-----CChHHHHHHHHHHh--c-cCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe
Q 017569 51 MLDGNPR-LNLASFVT-T-----WMEPECDKLVMASI--N-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG 120 (369)
Q Consensus 51 ~~~~~p~-~~l~~~~~-~-----~~~~~v~~~~~~~~--~-~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~ 120 (369)
..+++|. ++|+.+.+ . +..+.+.+++.... + .....|....+..++++++.+++ +|.+........+
T Consensus 44 ~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~~~~~~~~~~i 120 (448)
T 3meb_A 44 NADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGKDSKAAQEGRI 120 (448)
T ss_dssp HHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCTTCHHHHTTCE
T ss_pred HhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCCCccccCcCcE
Confidence 3455564 67766655 2 22356677655554 1 22334444567788888866665 3765200001247
Q ss_pred EE--eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh----hhcceeEEEec-cCC-ccccCH
Q 017569 121 VG--TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR----YFEVELKEVKL-EEG-YYVMNP 192 (369)
Q Consensus 121 ~~--t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~----~~G~~v~~v~~-~~~-~~~~d~ 192 (369)
++ |+||++|+.+++...... ..+++|++++++|..+...++ ..|++++.+|+ +++ ++.+|+
T Consensus 121 ~~~~t~ggt~al~l~~~~~~~~-----------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~ 189 (448)
T 3meb_A 121 ASCQSLSGTGSLHIGFEFLHLW-----------MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDF 189 (448)
T ss_dssp EEEEESHHHHHHHHHHHHHHHH-----------CTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCH
T ss_pred EEEECCcHHHHHHHHHHHHHHh-----------CCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCH
Confidence 88 999999998754322211 014689999999999999999 99999999998 554 589999
Q ss_pred HHHHHHHhh---cCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCcccc-cc
Q 017569 193 VKAVELVDE---NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWD-FR 264 (369)
Q Consensus 193 ~~L~~~i~~---~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~-~~ 264 (369)
++|++++++ +++++++++++||||.+.+ +++|+++|+++ ++++++|++|+++...-.. +..... +.
T Consensus 190 e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~ 263 (448)
T 3meb_A 190 SNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK------KHIAFFDSAYQGFATGSFEADAFAVRMFV 263 (448)
T ss_dssp HHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTSSSCHHHHTHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEecccccccCCCcccCchhHHHHh
Confidence 999999985 5778889999999999865 66699999999 9999999999875531000 000111 10
Q ss_pred CCCCc-EEEEcCccCCC-CCCCeEEE
Q 017569 265 LPLVK-SINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 265 ~~~~D-si~~~~hK~l~-~p~g~g~l 288 (369)
..+.+ .++.+++|.++ ...+.|++
T Consensus 264 ~~~~~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 264 DAGVEVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp HTTCCEEEEEECTTTSCCGGGCCEEE
T ss_pred hcCCcEEEEecccccCCCccccceee
Confidence 11233 44677999975 34668887
No 166
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.79 E-value=6.5e-18 Score=164.78 Aligned_cols=154 Identities=16% Similarity=0.040 Sum_probs=123.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----hh
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RY 173 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~----~~ 173 (369)
.++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+ +.
T Consensus 61 ~~l~~~la~~~g~~~-------~v~~~sGt~A~~~~l~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~~~~ 120 (421)
T 2ctz_A 61 DVLEKRLAALEGGKA-------ALATASGHAAQFLALTTLAQA-------------GDNIVSTPNLYGGTFNQFKVTLKR 120 (421)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEECSCCCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCc-------eEEecCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHHH
Confidence 455566889998863 566777899999998876331 478999999999877665 67
Q ss_pred hcceeEEE-eccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccc-cccc
Q 017569 174 FEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGFI 251 (369)
Q Consensus 174 ~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~-~~~~ 251 (369)
.|++++.+ +.+ |+++|+++|++++++|+++.++||+|.+.|+++|+++|+++ ++++|+|++| +.+.
T Consensus 121 ~g~~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~------g~~livD~~~~~~g~ 188 (421)
T 2ctz_A 121 LGIEVRFTSREE------RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREK------GVALIVDNTFGMGGY 188 (421)
T ss_dssp TTCEEEECCTTC------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECGGGGGGT
T ss_pred cCCEEEEECCCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCcccccc
Confidence 79888888 553 78999999999999999999999999999999999999999 9999999999 6442
Q ss_pred ccccCCCccccccCCCCcEEEEcCccCCCCCCC-eEEEEEe
Q 017569 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWR 291 (369)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g-~g~l~~~ 291 (369)
. .. ... .++|.++.++||++++|.+ .|.++++
T Consensus 189 ~---~~--~~~---~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 189 L---LR--PLA---WGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp S---CC--GGG---GTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred c---CC--ccc---cCCeEEEECCcccccCCCCcEEEEEEe
Confidence 1 11 122 2689999999999988663 6767775
No 167
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.79 E-value=3.6e-18 Score=167.80 Aligned_cols=175 Identities=14% Similarity=0.054 Sum_probs=130.1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc-
Q 017569 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ- 164 (369)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h- 164 (369)
.|...++..+++++ +++++|.+. +++|+||++|+.+++.++.++ ++ +++.++|
T Consensus 70 ~y~~~~~~~~l~~~----la~~~~~~~-------~~~~~~gt~a~~~al~~l~~~-------------gd--i~~~~~~~ 123 (456)
T 2ez2_A 70 AYAGSENFYHLERT----VQELFGFKH-------IVPTHQGRGAENLLSQLAIKP-------------GQ--YVAGNMYF 123 (456)
T ss_dssp CSSSCHHHHHHHHH----HHHHHCCSE-------EEEESSHHHHHHHHHHHHCCT-------------TC--EEEESSCC
T ss_pred hcccChhHHHHHHH----HHHHhCCCc-------EEEeCCcHHHHHHHHHHhCCC-------------CC--Eecccccc
Confidence 34445566666655 777888763 899999999999998887431 23 6778888
Q ss_pred chHHHHHhhhcceeEEEeccCC---------ccccCHHHHHHHHhhcC----cEEEEeeCCC-CcccCCC---HHHHHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDENT----ICVAAILGST-LTGEFED---VKLLHDL 227 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~~----~~v~~~~~~~-~tG~~~~---l~~I~~l 227 (369)
.++..++...|++++.++++++ ++.+|+++|++++++++ ++|+++.|+| |+|.+.+ +++|+++
T Consensus 124 ~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~l 203 (456)
T 2ez2_A 124 TTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVREL 203 (456)
T ss_dssp HHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHH
T ss_pred chhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHH
Confidence 7888889999999999998732 27899999999998876 7889998998 9998865 9999999
Q ss_pred HHHhhhccCCCceEEeeccccccc--------ccccCCCccc----cccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 228 LTKKNEETGWDTPIHVDAASGGFI--------APFLYPDLEW----DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~--------~~~~~~~~~~----~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
|+++ ++++|+|++|+.+. ..+ ...... ... ...|.+++++||+++.| ..|+++.++++.
T Consensus 204 a~~~------~i~li~De~~~~g~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~ 274 (456)
T 2ez2_A 204 TEAH------GIKVFYDATRCVENAYFIKEQEQGF-ENKSIAEIVHEMF-SYADGCTMSGKKDCLVN-IGGFLCMNDDEM 274 (456)
T ss_dssp HHHT------TCCEEEECTTHHHHHHHHHHHSTTC-TTSCHHHHHHHHH-TTCSEEEEETTTTTCCS-SCEEEEESCHHH
T ss_pred HHHc------CCeEEEEcccccccccccccccccc-CCcchhhhhhhhc-ccCCEEEEeCcccCCCC-ceeEEEECCHHH
Confidence 9999 99999999998631 111 111100 011 23688888899998755 468887754433
No 168
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.79 E-value=6.5e-18 Score=165.38 Aligned_cols=189 Identities=12% Similarity=-0.017 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
.+.+.+++.+++.... +...+...++++ .+++++|.+. .+++++|++|+.+++.++...+.. + .
T Consensus 42 ~~~~~~a~~~~~~~~~--~~~~~~~~~l~~----~la~~~g~~~-------~i~~~sGt~a~~~al~~l~~~~~~-~--~ 105 (437)
T 3bb8_A 42 GTKELQLMVEASLDGW--LTTGRFNDAFEK----KLGEYLGVPY-------VLTTTSGSSANLLALTALTSPKLG-V--R 105 (437)
T ss_dssp CHHHHHHHHHHHHHCC--CBSCHHHHHHHH----HHHHHHTCSE-------EEEESCHHHHHHHHHHHTTCGGGG-G--G
T ss_pred CHHHHHHHHHHHHcCC--cCCChHHHHHHH----HHHHHHCCCc-------EEEeCCHHHHHHHHHHHhhhcccc-c--c
Confidence 4667777777775432 233445555554 4888888863 789999999999998876200000 0 0
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHH
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~ 228 (369)
+ -..+++|+++.++|.++..++...|++++.+|++++++.+|+++|++++++++++|+++. ++|.+.|+++|.++|
T Consensus 106 ~-~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~ 181 (437)
T 3bb8_A 106 A-LKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVA 181 (437)
T ss_dssp S-CCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHH
T ss_pred c-CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHH
Confidence 0 012468999999999999999999999999999864589999999999998888888764 457789999999999
Q ss_pred HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc---CccCCCCCCCeEEEEEe
Q 017569 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS---GHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~---~hK~l~~p~g~g~l~~~ 291 (369)
+++ ++++|+|+||+.+..+ .. . .+. ...|.++.+ +||+ .++ ..|+++.+
T Consensus 182 ~~~------~~~li~D~a~~~g~~~--~~--~-~~~-~~~d~~~~s~~~~k~l-~~g-~gg~~~~~ 233 (437)
T 3bb8_A 182 DKY------NLWLIEDCCDALGSTY--DG--K-MAG-TFGDIGTVSFYPAKHI-TMG-EGGAVFTQ 233 (437)
T ss_dssp HHH------TCEEEEECTTCTTCEE--TT--E-ETT-SSSSEEEEECSTTSSS-CCS-SCEEEEES
T ss_pred HHc------CCEEEEECccccCceE--CC--e-ecc-cccCEEEEECcCCcCC-CCC-CeEEEEeC
Confidence 999 9999999999855431 11 1 111 125776555 4555 333 34666654
No 169
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.79 E-value=3.1e-18 Score=170.64 Aligned_cols=199 Identities=11% Similarity=0.027 Sum_probs=144.8
Q ss_pred HHHHHHHHhcc----CCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 72 CDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 72 v~~~~~~~~~~----n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
+.+.+.+++.. ....|....+..++++++.+++++..| .+.+ ...+++|+|+++++.+++.++.+.
T Consensus 106 ~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~---~~~i~~t~G~~~ai~~~~~~l~~~------ 176 (498)
T 3ihj_A 106 AKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPAD---PDNIYLTTGASDGISTILKILVSG------ 176 (498)
T ss_dssp HHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCC---GGGEEEESSHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCC---cccEEEcCCHHHHHHHHHHHHcCC------
Confidence 33444555543 234556667889999999999999885 6532 135899999999999988877441
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCC-ccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccC--
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF-- 218 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~-- 218 (369)
|. ..++.|+++.++|.++..+++..|+.++.++++++ +|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 177 --gd-~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s 253 (498)
T 3ihj_A 177 --GG-KSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQS 253 (498)
T ss_dssp --CG-GGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCC
T ss_pred --CC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCC
Confidence 10 01248999999999999999999999999999753 589999999999987 58999999999999999
Q ss_pred -CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-C---------CCCcEEE-EcCccCCC--CCCC
Q 017569 219 -EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---------PLVKSIN-VSGHKYGL--VYAG 284 (369)
Q Consensus 219 -~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---------~~~Dsi~-~~~hK~l~--~p~g 284 (369)
+++++|+++|+++ ++++++|++|+.+.+. .......+. . ..+..++ .+.+|.+. ...+
T Consensus 254 ~~~l~~i~~la~~~------~~~li~De~y~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R 325 (498)
T 3ihj_A 254 RKCIEDVIHFAWEE------KLFLLADEVYQDNVYS--PDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYR 325 (498)
T ss_dssp HHHHHHHHHHHHHH------TCEEEEECTTTTCBCC--TTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSC
T ss_pred HHHHHHHHHHHHHc------CcEEEEEcCccccccC--CCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccc
Confidence 4577899999999 9999999999876541 110111111 0 1233444 46899984 5678
Q ss_pred eEEEEE
Q 017569 285 VGWVVW 290 (369)
Q Consensus 285 ~g~l~~ 290 (369)
.|++++
T Consensus 326 ~G~~~~ 331 (498)
T 3ihj_A 326 GGYMEV 331 (498)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 899885
No 170
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.78 E-value=2.9e-18 Score=166.23 Aligned_cols=214 Identities=11% Similarity=0.010 Sum_probs=147.4
Q ss_pred CCcccccccc------CCChHHHHHHHHH-HhccC-CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE--eCC
Q 017569 56 PRLNLASFVT------TWMEPECDKLVMA-SINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG--TVG 125 (369)
Q Consensus 56 p~~~l~~~~~------~~~~~~v~~~~~~-~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--t~G 125 (369)
..++|+.+.+ .++++.+.+++.+ +++.. ...|....+..++++++.+++.+..|.+.+. ..+++ |+|
T Consensus 30 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~~~t~g 106 (412)
T 1yaa_A 30 TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQE---DRVISVQSLS 106 (412)
T ss_dssp SCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT---TCEEEEEEEH
T ss_pred CeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCc---ceEEEEeccc
Confidence 3345555443 1345778888888 77632 2344455678889988887776555532110 24788 999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHhhc--
Q 017569 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDEN-- 202 (369)
Q Consensus 126 gt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~-- 202 (369)
|++|+.+++..+..- . .+++|+++.++|..+...++..|++++.+|+ +++++.+|+++|+++++++
T Consensus 107 ~~~a~~~~~~~~~~~----------~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 175 (412)
T 1yaa_A 107 GTGALHISAKFFSKF----------F-PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPE 175 (412)
T ss_dssp HHHHHHHHHHHHHHH----------C-TTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCT
T ss_pred hHhHHHHHHHHHHHh----------C-CCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCC
Confidence 999998875443321 0 1468999999999999999999999999998 5445899999999999864
Q ss_pred -CcEEEEeeCCCCcccCC---CHHHHHHHHHHhhhccCCCceEEeeccccccccccc-CCCccc-cccCCC----CcEEE
Q 017569 203 -TICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLEW-DFRLPL----VKSIN 272 (369)
Q Consensus 203 -~~~v~~~~~~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~-~~~~~~----~Dsi~ 272 (369)
++++++++++||||.+. ++++|+++|+++ ++++++|++|+.+...-. .+.... ++...+ -+.++
T Consensus 176 ~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (412)
T 1yaa_A 176 GSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASK------NHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVC 249 (412)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEE
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEE
Confidence 34555599999999985 477889999999 999999999976433100 000011 111112 24556
Q ss_pred EcCccCCCC-CCCeEEEE
Q 017569 273 VSGHKYGLV-YAGVGWVV 289 (369)
Q Consensus 273 ~~~hK~l~~-p~g~g~l~ 289 (369)
.+.+|.++. +.+.|+++
T Consensus 250 ~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 250 QSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp EECTTTSCCGGGCEEEEE
T ss_pred eccCCCCCCcCCcceEEE
Confidence 678998853 34579887
No 171
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.78 E-value=6.4e-18 Score=163.09 Aligned_cols=220 Identities=13% Similarity=0.022 Sum_probs=153.7
Q ss_pred cCCCC-cccccccc-C-----CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE--
Q 017569 53 DGNPR-LNLASFVT-T-----WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-- 122 (369)
Q Consensus 53 ~~~p~-~~l~~~~~-~-----~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-- 122 (369)
..+|. ++|+.+.+ . +..+.+.+++.+..+. ....|....+..++++++.+++.+.+|.+.+. ..+++
T Consensus 25 ~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~v~ 101 (401)
T 7aat_A 25 DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS---GRYVTVQ 101 (401)
T ss_dssp CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT---TCEEEEE
T ss_pred CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc---CceEEEe
Confidence 34443 56665554 2 1225677777776642 33444455678899999888887666643211 23665
Q ss_pred eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHh-
Q 017569 123 TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD- 200 (369)
Q Consensus 123 t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~- 200 (369)
|+||++|+.+++.+++... ..++.|+++.++|..+...++..|++++.+|++ ++++.+|++++++.++
T Consensus 102 t~G~~~al~~~~~~l~~~~----------~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 171 (401)
T 7aat_A 102 GISGTGSLRVGANFLQRFF----------KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISK 171 (401)
T ss_dssp EEHHHHHHHHHHHHHHHHC----------TTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT
T ss_pred cCcchHHHHHHHHHHHHhc----------cCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHh
Confidence 9999999999887765320 114689999999999999999999999999985 3358999998888776
Q ss_pred --hcCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCcccc-c-cCCCCcEEE
Q 017569 201 --ENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWD-F-RLPLVKSIN 272 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~-~-~~~~~Dsi~ 272 (369)
+++++|++++|+||||.+ +++++|+++|+++ ++++++|.+|..+...-.. +..... + ....-..++
T Consensus 172 ~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (401)
T 7aat_A 172 IPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKR------NLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLS 245 (401)
T ss_dssp SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEE
T ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEE
Confidence 467899999999999976 4588999999999 9999999999875431000 000010 1 122334566
Q ss_pred EcCccCCC-CCCCeEEEEEe
Q 017569 273 VSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 273 ~~~hK~l~-~p~g~g~l~~~ 291 (369)
.+++|.++ .+.+.|++++.
T Consensus 246 ~S~sK~~~~~G~RiG~l~~~ 265 (401)
T 7aat_A 246 QSYAKNMGLYGERAGAFTVI 265 (401)
T ss_dssp EECTTTSCCGGGCEEEEEEE
T ss_pred ecCCcccccccCceEEEEEE
Confidence 78999985 44568998863
No 172
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.78 E-value=7.3e-18 Score=162.35 Aligned_cols=254 Identities=11% Similarity=-0.081 Sum_probs=161.9
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++.+++.........+ ......++++++++++|.+. ..+++|+||++|+..++.+++...
T Consensus 62 ~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~~a~~~al~~~~~~~------ 128 (395)
T 1vef_A 62 GNPEVVEAVKRQAETLMAMPQTL--PTPMRGEFYRTLTAILPPEL-----NRVFPVNSGTEANEAALKFARAHT------ 128 (395)
T ss_dssp TCHHHHHHHHHHHHHCCCCCTTS--CCHHHHHHHHHHHHTSCTTE-----EEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCCCCcccc--CCHHHHHHHHHHHHhcCCCc-----CEEEEcCcHHHHHHHHHHHHHHHh------
Confidence 55778888888876432211111 23455677778999997654 248999999999999998765210
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHhhhcceeE---EEeccCCc---cccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC
Q 017569 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFEVELK---EVKLEEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h-~s~~~~~~~~G~~v~---~v~~~~~~---~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (369)
.+++|++++++| .++..++...|..+. .+|+..+. ...|+++|++++++++++|+++.++++||.+.|
T Consensus 129 -----~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 203 (395)
T 1vef_A 129 -----GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPA 203 (395)
T ss_dssp -----SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEEC
T ss_pred -----CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCC
Confidence 135677777665 455556666666521 11221110 014899999999988888888888889998877
Q ss_pred ----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCc
Q 017569 221 ----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (369)
Q Consensus 221 ----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~ 296 (369)
+++|+++|+++ ++++|+|++|+++.. .......+..-..+|.++ .+|+++++.+.|+++++++ ..
T Consensus 204 ~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~--~g~~~~~~~~~~~~d~~s--~sK~~~~g~~~G~~~~~~~-~~ 272 (395)
T 1vef_A 204 TPEFLRAAREITQEK------GALLILDEIQTGMGR--TGKRFAFEHFGIVPDILT--LAKALGGGVPLGVAVMREE-VA 272 (395)
T ss_dssp CHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEE--ECGGGGTTSSCEEEEEEHH-HH
T ss_pred CHHHHHHHHHHHHHc------CCEEEEEecccCCcc--CCchhHhhhcCCCCCEEE--EcccccCCCceEEEEehHH-HH
Confidence 99999999999 999999999985321 111111121122467775 5999888888999998753 22
Q ss_pred ccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcCC
Q 017569 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g~ 361 (369)
..+.. . .. ..+ .+.+.....++..+++.+..+++.+ +..++++++++.|++.+.
T Consensus 273 -~~l~~--~---~~--~~~--~~~~~~~~~a~~~al~~~~~~~~~~-~~~~~~~~l~~~l~~~~~ 326 (395)
T 1vef_A 273 -RSMPK--G---GH--GTT--FGGNPLAMAAGVAAIRYLERTRLWE-RAAELGPWFMEKLRAIPS 326 (395)
T ss_dssp -HTSCT--T---SS--CCS--STTCHHHHHHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHTSCC
T ss_pred -hhhcc--C---Cc--CCC--cCCCHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHhhc
Confidence 22211 0 00 001 1222333445556666654422211 788899999999998764
No 173
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.78 E-value=1.9e-18 Score=168.96 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHHHHHh--
Q 017569 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFAR-- 172 (369)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~-~~h~s~~~~~~-- 172 (369)
..+++.+++++++|.+... . .++.++|++|+..++.++.++ +++|+++. +.|.++...+.
T Consensus 66 ~~~~l~~~la~~~g~~~~~---~-~i~~~sGt~Ai~~al~al~~~-------------Gd~Vl~~~~~~y~~~~~~~~l~ 128 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGL---V-RPQIISGTHAISTALFGILRP-------------GDELLYITGKPYDTLEEIVGVR 128 (431)
T ss_dssp HHHHHHHHHHHHTTCSEEC---C-BTTSCSHHHHHHHHHHTTCCT-------------TCEEEECSSSCCTTHHHHTTSS
T ss_pred hHHHHHHHHHHHhCCCccc---c-cceeeCHHHHHHHHHHHhCCC-------------CCEEEEeCCCCchhHHHHHhhc
Confidence 3667778899999998521 1 122447799999888776432 46899988 88988886654
Q ss_pred --------hhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEee----CCCCcccCCCHHHHHHHHHH--hhhccCCC
Q 017569 173 --------YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEETGWD 238 (369)
Q Consensus 173 --------~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~l~~I~~l~~~--~~~~~~~~ 238 (369)
..|++++.+|.+++ +.+|+++|+++++++|++|+++. |++++|.+.++++|+++|++ + +
T Consensus 129 g~~~~~~~~~G~~~~~v~~~~~-~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~------~ 201 (431)
T 3ht4_A 129 GKGVGSFKEYNIGYNAVPLTEG-GLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP------D 201 (431)
T ss_dssp SCSSSCSGGGTCEEEECCBCTT-SSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT------T
T ss_pred ccccchHHHcCCEEEEeCCCCC-CCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC------C
Confidence 47899999999875 89999999999999999999996 55666667899999999999 9 9
Q ss_pred ceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCC---CCCeEEEEEeCCCCccccccc--ccCccCCCCCC
Q 017569 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV---YAGVGWVVWRTKDDLPDELVF--HINYLGSDQPT 313 (369)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~---p~g~g~l~~~~~~~~~~~~~~--~~~y~~~~~~~ 313 (369)
+++++|++|+.+..+ .+ +.. .++|.++.+++|++++ |.| |+++.++ +.. +.+.. .....+... .
T Consensus 202 ~~livDea~~~~~~~---~~-~~~---~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~-~li-~~l~~~~~~~~~g~~~-~ 270 (431)
T 3ht4_A 202 VVVFVDNCYGEFIEE---QE-PCH---VGADLMAGSLIKNPGGGIVKTG-GYIVGKE-QYV-EACAYRLTSPGIGAEA-G 270 (431)
T ss_dssp CEEEEECTTCTTSSS---CC-GGG---TTCSEEEEETTSGGGTTTCSSC-EEEEECH-HHH-HHHHHHHSCTTTTTSC-S
T ss_pred CEEEEeCCChhhccC---CC-ccc---cCCeEEEcCccccCCCCCCCce-EEEEecH-HHH-HHHHHHhccCCccccc-C
Confidence 999999999976531 11 122 2689999999999655 566 8887743 222 22211 111111100 0
Q ss_pred ccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 314 FTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 314 ~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+... .|..++.+ +....+ +..++++++++.|+++|+
T Consensus 271 ----~~~~~-----~~~~~~~l--~~~~~~~~~~~~~a~~l~~~L~~~g~ 309 (431)
T 3ht4_A 271 ----ASLYS-----LQEMYQGF--FLAPHVAGQALKGAIFTAAFLEKLGM 309 (431)
T ss_dssp ----CCCSC-----SHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----ccHHH-----HHHHHhHh--hhHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 01111 11222222 122333 889999999999999986
No 174
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.78 E-value=2.3e-18 Score=165.68 Aligned_cols=211 Identities=11% Similarity=-0.027 Sum_probs=147.1
Q ss_pred Ccccccccc------CCChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE--eCCch
Q 017569 57 RLNLASFVT------TWMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG--TVGSS 127 (369)
Q Consensus 57 ~~~l~~~~~------~~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--t~Ggt 127 (369)
.++|+.+.+ .++++.+.+++.+.++. ....|....+..++++++.+++... +.++ ..+++ |+||+
T Consensus 28 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~-----~~v~~~~~~g~~ 101 (394)
T 2ay1_A 28 KIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKS-----ETTATLATVGGT 101 (394)
T ss_dssp CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCG-----GGEEEEEEEHHH
T ss_pred ccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCc-----ccEEEEecCCch
Confidence 345555542 13457788888877653 2334444456788888876666321 2232 24777 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhc---C
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDEN---T 203 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~---~ 203 (369)
+|+..++.+++... .+++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++. +
T Consensus 102 ~a~~~~~~~~~~~~-----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 170 (394)
T 2ay1_A 102 GALRQALELARMAN-----------PDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGD 170 (394)
T ss_dssp HHHHHHHHHHHHHC-----------TTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTC
T ss_pred hHHHHHHHHHHhcC-----------CCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCC
Confidence 99999988775410 146899999999999999999999999999852 35889999999999763 5
Q ss_pred cEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCc-EEEEcCccC
Q 017569 204 ICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVK-SINVSGHKY 278 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~D-si~~~~hK~ 278 (369)
++++++.++||||.+.+ +++|+++|+++ ++++++|++|+++....-.+..... +...+.+ .+..+.+|+
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 244 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKT------GALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKN 244 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCC
Confidence 67778999999999864 66889999999 9999999999875431000000111 1111223 445578999
Q ss_pred CC-CCCCeEEEEE
Q 017569 279 GL-VYAGVGWVVW 290 (369)
Q Consensus 279 l~-~p~g~g~l~~ 290 (369)
++ .+.++|++++
T Consensus 245 ~~~~G~riG~~~~ 257 (394)
T 2ay1_A 245 FGIYRERTGCLLA 257 (394)
T ss_dssp TTCGGGCEEEEEE
T ss_pred CcCcCCccceEEE
Confidence 86 4456799987
No 175
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.77 E-value=7.4e-18 Score=161.82 Aligned_cols=200 Identities=16% Similarity=0.112 Sum_probs=144.8
Q ss_pred HHHHHHhhhhcCC-CCcccccccc-CCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe
Q 017569 43 YQVINDELMLDGN-PRLNLASFVT-TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG 120 (369)
Q Consensus 43 ~~~l~~~~~~~~~-p~~~l~~~~~-~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~ 120 (369)
.+.+...+...++ +.+++....+ .+.++.+.+++. +.. +...+++++.+++++++|.+.. ...
T Consensus 15 ~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~-----~~~------~~~~~~~~~~~~~a~~~g~~~~----~~~ 79 (374)
T 2aeu_A 15 RKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN-----TYI------GSSYFAEKVNEYGLKHLGGDEN----DKC 79 (374)
T ss_dssp HHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT-----STT------HHHHHHHHHHHHHHHHHTCCTT----EEE
T ss_pred HHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH-----Hhc------CchHHHHHHHHHHHHHhCCCCc----ceE
Confidence 3345555545565 6777665543 344577777764 111 1245677888889999998420 237
Q ss_pred EEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC---cchHHHHHhhhcceeEEEeccCCccccCHHHHHH
Q 017569 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV---QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE 197 (369)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~---h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~ 197 (369)
++++||++|+..++.++ + +++|+++.++ |+++...++..|++++.+ .|+++|++
T Consensus 80 ~~~~ggt~a~~~~~~~~--~-------------gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--------~d~~~l~~ 136 (374)
T 2aeu_A 80 VGFNRTSSAILATILAL--K-------------PKKVIHYLPELPGHPSIERSCKIVNAKYFES--------DKVGEILN 136 (374)
T ss_dssp EEESSHHHHHHHHHHHH--C-------------CSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--------SCHHHHHT
T ss_pred EEEcChHHHHHHHHHhC--C-------------CCEEEEecCCCCccHHHHHHHHHcCcEEEEe--------CCHHHHHh
Confidence 99999999999998876 2 4789999984 444444677889888777 27899998
Q ss_pred HHhhcCcE-EEEeeCCCCcc-cCCCHHHHHHHHHHhhhccCCCceEEeecccccccc-cccCCCccccccCCCCcEEEEc
Q 017569 198 LVDENTIC-VAAILGSTLTG-EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 198 ~i~~~~~~-v~~~~~~~~tG-~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+ ++++++ |++++++||+| ...++++|.++|+++ ++++|+|++|+.+.. +...+ .... .++|.++.+
T Consensus 137 ~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~-~~~~---~~~di~~~S 205 (374)
T 2aeu_A 137 K-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNK------EAIVFVDDASGARVRLLFNQP-PALK---LGADLVVTS 205 (374)
T ss_dssp T-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHH------TCCEEEECTTHHHHHHHTTCC-CHHH---HTCSEEEEE
T ss_pred c-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHc------CCEEEEECCcccccccccccC-Cccc---cCCcEEEec
Confidence 8 778999 99999999999 889999999999999 999999999987531 11110 0111 257899999
Q ss_pred CccCCCCCCCeEEEEEeC
Q 017569 275 GHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 275 ~hK~l~~p~g~g~l~~~~ 292 (369)
+||++.+ ++.|+++.++
T Consensus 206 ~sK~l~g-~~~G~~~~~~ 222 (374)
T 2aeu_A 206 TDKLMEG-PRGGLLAGKK 222 (374)
T ss_dssp TTSSSSS-CSCEEEEEEH
T ss_pred CcccccC-cceEEEEECH
Confidence 9999765 5889988764
No 176
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.77 E-value=2.6e-18 Score=166.44 Aligned_cols=228 Identities=14% Similarity=0.056 Sum_probs=152.2
Q ss_pred HHHHHHHhhhhcC-CCCccccccccCCCh---HHHHHHHHHHhccCC-----CCCCCCcchHHHHHHHHHHHHHHhCCCC
Q 017569 42 AYQVINDELMLDG-NPRLNLASFVTTWME---PECDKLVMASINKNY-----VDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (369)
Q Consensus 42 i~~~l~~~~~~~~-~p~~~l~~~~~~~~~---~~v~~~~~~~~~~n~-----~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (369)
+.+.+.+...... ...++|+.+.|...+ +.+.+++.+.+.++. ..|....+..++++++.+++.+.+|.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~ 96 (417)
T 3g7q_A 17 ITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDI 96 (417)
T ss_dssp HHHHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 4444444444322 334677777776543 345666666654321 2455566888999999999998888764
Q ss_pred CCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec-CCCcchHHHHHh----hhcceeEEEeccC--
Q 017569 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFAR----YFEVELKEVKLEE-- 185 (369)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s-~~~h~s~~~~~~----~~G~~v~~v~~~~-- 185 (369)
+ ...+++|+|+++|+.+++.++..+ |.+.++.+|+++ .++|..+...+. ..+..+..++++.
T Consensus 97 ~---~~~i~~t~G~t~al~~~~~~l~~~--------gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (417)
T 3g7q_A 97 E---PQNIALTNGSQSAFFYLFNLFAGR--------RADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ 165 (417)
T ss_dssp C---GGGEEEESCHHHHHHHHHHHHSBC------------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE
T ss_pred C---cccEEEeCCcHHHHHHHHHHHcCC--------CccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc
Confidence 2 246899999999999999887542 211112278888 899988876653 2233344444432
Q ss_pred CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc
Q 017569 186 GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (369)
Q Consensus 186 ~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (369)
.++.+|+++|+ +++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|+.+........ ..
T Consensus 166 ~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~------~~~li~De~~~~~~~~~~~~~--~~ 235 (417)
T 3g7q_A 166 FKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH------NIPLVIDNAYGVPFPGIIFSE--AR 235 (417)
T ss_dssp EEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTCTTTTCCBCSC--CC
T ss_pred cccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc------CCEEEEeCCCccccccccccc--cc
Confidence 24688999998 7778999999999999999977 89999999999 999999999985322100000 00
Q ss_pred ccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 263 FRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 263 ~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
......+.+..+.+|++..+.+.|+++.
T Consensus 236 ~~~~~~~i~~~s~sK~~~~G~r~G~~~~ 263 (417)
T 3g7q_A 236 PLWNPNIILCMSLSKLGLPGSRCGIIIA 263 (417)
T ss_dssp CCCCTTEEEEEESGGGTCTTSCCEEEEC
T ss_pred cCCCCCEEEEEechhccCCCcceEEEEe
Confidence 1123567778889998777778998876
No 177
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.77 E-value=2.3e-18 Score=166.31 Aligned_cols=252 Identities=13% Similarity=-0.004 Sum_probs=166.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCCchHHHHHHHHHHHHHHHH
Q 017569 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~ 143 (369)
+.++++.+.+++.++.+........++...++.+++++++++++|++.. ..+++ |+||++|+.+++.++.+
T Consensus 48 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~i~~~t~g~t~al~~~~~~l~~---- 119 (398)
T 2fyf_A 48 PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDG----YEVILGNGGATAFWDAAAFGLID---- 119 (398)
T ss_dssp SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT----CEEEEEETCHHHHHHHHHHHTCS----
T ss_pred CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEeCCchhHHHHHHHHHhcC----
Confidence 4445677777766532111111123455667778899999999999731 24777 99999999999888632
Q ss_pred HHHhcCCCCCCCeEEecCCCcch-HHHHHhhh--cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC
Q 017569 144 KRKEQGKPYDKPNIVTGANVQVC-WEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (369)
Q Consensus 144 ~~~~~g~~~~~~~Vi~s~~~h~s-~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (369)
+..++++...|.. +...+... |+.++.||++. +..++. .++++|++|++++++||||.+.|
T Consensus 120 ----------~gv~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~ 183 (398)
T 2fyf_A 120 ----------KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDP-GSAPEP-----QTDPSVDVIAWAHNETSTGVAVA 183 (398)
T ss_dssp ----------SCEEEEECSHHHHHHHHHHHHCTTSCCCEEEECCT-TCCCCC-----CCCTTCSEEEEESEETTTTEECC
T ss_pred ----------CCeEEEeCCHHHHHHHHHHHHhCCCCceEEEecCC-CCCCCc-----cccCCCCEEEEeCcCCCcceecc
Confidence 1224445544532 22244555 88899999873 233342 25678999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCccccc
Q 017569 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (369)
Q Consensus 221 l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 300 (369)
+++|.++ + ++++|+|++|+.+..+ .++. .+|.++.++||++++|.|+|+++++++ .. ..+
T Consensus 184 ~~~i~~~---~------~~~vivD~a~~~~~~~-------~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~-~~-~~l 243 (398)
T 2fyf_A 184 VRRPEGS---D------DALVVIDATSGAGGLP-------VDIA--ETDAYYFAPQKNFASDGGLWLAIMSPA-AL-SRI 243 (398)
T ss_dssp CCCCTTC---C-------CEEEEECTTTTTTSC-------CCGG--GCSEEEECTTSTTCSCSSEEEEEECHH-HH-HHH
T ss_pred hHHhhhh---c------CCeEEEEeccccCCcc-------cCcc--cCcEEEEecCcccCCCCceEEEEECHH-HH-HHh
Confidence 9998887 7 9999999999865432 1222 479999999999987767999888642 22 111
Q ss_pred cc-------ccCccCCCC--C---CccccCCcchhHHHHHHHHHHHhcHhh-HHHH--HhhHHHHHHHHHHHhcC
Q 017569 301 VF-------HINYLGSDQ--P---TFTLNFSKGSSQIIAQYYQFIRLGFEV-IPSF--CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 301 ~~-------~~~y~~~~~--~---~~~l~~tr~~~~~l~~~~~l~~lg~~G-~~~~--~~~~~a~~l~~~L~~~g 360 (369)
.. ...|..... . .....++.+....+++..+++.+..+| ++++ +..++++++.+.|++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~ 318 (398)
T 2fyf_A 244 EAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERP 318 (398)
T ss_dssp HHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHST
T ss_pred hcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00 011221100 0 001114555555667778888877776 7777 88999999999999873
No 178
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.64 E-value=2.4e-20 Score=179.85 Aligned_cols=214 Identities=11% Similarity=-0.049 Sum_probs=156.0
Q ss_pred ccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.+. ++++.+.+++.++++.....|... ..++++++.+++++.+|.+.+. ..+++|+||++|+.+++.+
T Consensus 34 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~---~~v~~~~g~~~a~~~~~~~ 108 (392)
T 3b1d_A 34 LPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK---EDIVFVEGVVPAISIAIQA 108 (392)
Confidence 344444443 335678888887776543333322 7788999999998888854321 3489999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CC-ccccCHHHHHHHHh-hcCcEEEEeeCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EG-YYVMNPVKAVELVD-ENTICVAAILGST 213 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~-~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (369)
+..+ +++|+++.++|..+...++..|++++.+|++ ++ ++.+|+++|+++++ +++++|+++.++|
T Consensus 109 ~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~n 175 (392)
T 3b1d_A 109 FTKE-------------GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHN 175 (392)
Confidence 7543 3689999999999999999999999999985 32 36799999999997 6788888999999
Q ss_pred CcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC--CCCcEEEEcCccCCC-CCCCeEE
Q 017569 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGL-VYAGVGW 287 (369)
Q Consensus 214 ~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~Dsi~~~~hK~l~-~p~g~g~ 287 (369)
|+|.+. ++++|+++|+++ ++++++|++|+.+...--.......+.. ...+.+..+.+|+++ .+.+.|+
T Consensus 176 ptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 249 (392)
T 3b1d_A 176 PGGRVWEREVLEQIGHLCQKH------HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249 (392)
Confidence 999985 499999999999 9999999999876541000000011110 233456677999986 5667899
Q ss_pred EEEeCCCC
Q 017569 288 VVWRTKDD 295 (369)
Q Consensus 288 l~~~~~~~ 295 (369)
+++++++.
T Consensus 250 ~~~~~~~~ 257 (392)
T 3b1d_A 250 AIIENPTL 257 (392)
Confidence 98865433
No 179
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.77 E-value=6e-17 Score=155.77 Aligned_cols=253 Identities=10% Similarity=-0.063 Sum_probs=159.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.+.........+ .....+++++++++++|.+ ..++++||++|+..++.+++..... .
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~~gt~a~~~al~~~~~~~~~---~ 120 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRAF--HSDQLGPWYEKVAKLTNKE-------MVLPMNTGAEAVETAIKTARRWAYD---V 120 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTS--EETTHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHHhcCCC-------EEEEeCcHHHHHHHHHHHHHHhhhh---c
Confidence 35788888888876543322222 2234456677799999844 3899999999999999987653211 1
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcc-------------eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.|.+..+++|+++.++|......+..++. ++..++.+ |+++|++++++++++|+++.++||
T Consensus 121 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~~~v~~~~~~np 194 (392)
T 3ruy_A 121 KKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG------DLEALKAAITPNTAAFILEPIQGE 194 (392)
T ss_dssp SCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT------CHHHHHHHCCTTEEEEEECSSBST
T ss_pred cCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc------cHHHHHHHhccCeEEEEEeCccCC
Confidence 12222346899988887654433332221 13333321 799999999989999999999999
Q ss_pred cccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEEE
Q 017569 215 TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVV 289 (369)
Q Consensus 215 tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l~ 289 (369)
+|.+.| +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++ |.+.++ .+.|+++
T Consensus 195 tG~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~ 264 (392)
T 3ruy_A 195 AGINIPPAGFLKEALEVCKKE------NVLFVADEIQTGLGR--TGKVFACDWDNVTPDMYILG--KALGGGVFPISCAA 264 (392)
T ss_dssp TTSBCCCTTHHHHHHHHHHTT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEE
T ss_pred CCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCc--cccchhhhccCCCCCEEEEc--hhhhCChhhhEEEE
Confidence 999988 99999999999 999999999975322 11111112212246888875 887554 5689888
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
.+++ .. ..+.. . . ...+ .+.+.....++..+++.+..+.+.+ +..++++++++.|++.+
T Consensus 265 ~~~~-~~-~~~~~---~-~---~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~l~~~L~~~~ 323 (392)
T 3ruy_A 265 ANRD-IL-GVFEP---G-S---HGST--FGGNPLACAVSIAALEVLEEEKLTE-RSLQLGEKLVGQLKEID 323 (392)
T ss_dssp ECHH-HH-TTCCT---T-S---SCCS--STTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHTTCC
T ss_pred ECHH-HH-hhhcc---C-C---cCCC--CCCCHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHhc
Confidence 7542 21 11100 0 0 0001 1222333444445555543322111 88899999999999875
No 180
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.76 E-value=6.9e-18 Score=165.16 Aligned_cols=216 Identities=13% Similarity=0.074 Sum_probs=151.2
Q ss_pred CCc-cccccccCCCh---HHHHHHHHHHhcc-------C-----CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 017569 56 PRL-NLASFVTTWME---PECDKLVMASINK-------N-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV 119 (369)
Q Consensus 56 p~~-~l~~~~~~~~~---~~v~~~~~~~~~~-------n-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~ 119 (369)
..+ +|+.+.|...+ +.+.+++.+.+.+ . ...|....+..++++++.+++.+.+|.+.+ ...
T Consensus 32 ~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~---~~~ 108 (444)
T 3if2_A 32 QPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLT---SEN 108 (444)
T ss_dssp SCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCC---GGG
T ss_pred hhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCC---HHH
Confidence 346 67777776543 2345556655544 1 133445567889999999999988887642 245
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCC-----CCCCC----eEEec-CCCcchHHHHH------hhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK-----PYDKP----NIVTG-ANVQVCWEKFA------RYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~-----~~~~~----~Vi~s-~~~h~s~~~~~------~~~G~~v~~v~~ 183 (369)
+++|+||++|+.+++.++..+ |. ...++ +|+++ .++|..+...+ ...|..+..+++
T Consensus 109 i~~t~G~t~al~~~~~~l~~~--------gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGA--------FVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTH 180 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEE--------EECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEE
T ss_pred EEEecCcHHHHHHHHHHHhCC--------CccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEeccc
Confidence 999999999999998887432 10 00001 57776 78888776643 334667777887
Q ss_pred cCC----ccccCHHHHHHH---HhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeeccccccccc
Q 017569 184 EEG----YYVMNPVKAVEL---VDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (369)
Q Consensus 184 ~~~----~~~~d~~~L~~~---i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (369)
+++ ++.+|+++|+++ +++++++|+++.|+||||.+.| +++|+++|+++ ++++|+|++|+.+...
T Consensus 181 ~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~~~~~~ 254 (444)
T 3if2_A 181 DGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRY------DIPLIIDNAYGMPFPN 254 (444)
T ss_dssp TTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTCTTTTC
T ss_pred ccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHC------CCEEEEECCCCCcccc
Confidence 642 258999999998 6778999999999999999988 88999999999 9999999999853221
Q ss_pred ccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
.... .........+.+..+.+|++..+.+.|+++.
T Consensus 255 ~~~~--~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~ 289 (444)
T 3if2_A 255 IIYS--DAHLNWDNNTILCFSLSKIGLPGMRTGIIVA 289 (444)
T ss_dssp CBCS--CCCCCCCTTEEEEEESTTTTCGGGCCEEEEC
T ss_pred cccc--cccccCCCCEEEEechhhccCCCCceEEEEE
Confidence 0000 0111123567888899999766788898875
No 181
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.76 E-value=1.6e-17 Score=166.76 Aligned_cols=214 Identities=14% Similarity=0.055 Sum_probs=153.0
Q ss_pred cccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhC--CCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 59 NLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 59 ~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
+|+.+.+..+++.+.+.+.+.+..+ .++....+..++++++.+++++.++ .+.+ ....+++|+||++|+.+++.+
T Consensus 107 ~l~~g~~~~~~~~~v~a~~~~~~~~-~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~~~~i~~t~G~t~al~~~~~~ 183 (533)
T 3f6t_A 107 NYCHTELGLNRDKVVAEWVNGAVAN-NYPVPDRCLVNTEKIINYFLQELSYKDANLA--EQTDLFPTEGGTAAIVYAFHS 183 (533)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHTC-SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCG--GGEEEEEEEHHHHHHHHHHHH
T ss_pred eccCCCCCcCCcHHHHHHHHHHHhC-CCCCCcccHHHHHHHHHHHHHHhcCCCCCCC--CcceEEEECCHHHHHHHHHHH
Confidence 4444445444555544444444332 2233456789999999999977733 3321 013589999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc---CCccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE---EGYYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~---~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+... +.-..+++|+++.++|.++...++..|++++.++++ ++++.+|+++|++++++++++|++++|+|
T Consensus 184 l~~~--------~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N 255 (533)
T 3f6t_A 184 LAEN--------HLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN 255 (533)
T ss_dssp HHHT--------TSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred hhhh--------hccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence 4321 001124799999999999999999999999999985 34589999999999999999999999999
Q ss_pred CcccCCCHH---HHHHHHH-HhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEE
Q 017569 214 LTGEFEDVK---LLHDLLT-KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWV 288 (369)
Q Consensus 214 ~tG~~~~l~---~I~~l~~-~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l 288 (369)
|||.+.+.+ +|+++|+ ++ ++++++|++|+.+...+ . ...-.....+.++.+.+|.++ ..+.+|++
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~------~~~li~De~y~~~~~~~--~--~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l 325 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNP------KLMIISDEVYGAFVPNF--K--SIYSVVPYNTMLVYSYSKLFGCTGWRLGVI 325 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCT------TCEEEEECTTGGGSTTC--C--CHHHHSGGGEEEEEESHHHHTCGGGCEEEE
T ss_pred CCccccCHHHHHHHHHHHHhCC------CCEEEEcCCccccccCc--c--CHhhcCCCCEEEEecCcccCCCcccceEEE
Confidence 999997655 7888888 68 99999999998754311 1 111112245577888999975 44568999
Q ss_pred EEeCC
Q 017569 289 VWRTK 293 (369)
Q Consensus 289 ~~~~~ 293 (369)
++++.
T Consensus 326 ~~~~~ 330 (533)
T 3f6t_A 326 ALNEK 330 (533)
T ss_dssp EEESS
T ss_pred EECcH
Confidence 98765
No 182
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.76 E-value=7.3e-18 Score=163.38 Aligned_cols=210 Identities=12% Similarity=0.043 Sum_probs=148.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH-----hh
Q 017569 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-----RY 173 (369)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~-----~~ 173 (369)
++++.++++.|.+. .+++++|++|+.. +..+.+ .+++|+++.+.|......+ ..
T Consensus 71 ~l~~~la~l~g~~~-------~~~~~sG~~Ai~~-~~~l~~-------------~gd~Vi~~~~~y~~~~~~~~~~~~~~ 129 (400)
T 3nmy_A 71 AYERCVAALEGGTR-------AFAFASGMAATST-VMELLD-------------AGSHVVAMDDLYGGTFRLFERVRRRT 129 (400)
T ss_dssp HHHHHHHHHHTCSE-------EEEESSHHHHHHH-HHTTSC-------------TTCEEEEESSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHhCCCC-------EEEecCHHHHHHH-HHHHcC-------------CCCEEEEeCCCchHHHHHHHHhhHhh
Confidence 44455888998763 6788888999876 333222 1468999999998544443 33
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (369)
.|++++.++.+ |+++|++++++++++|++..++||+|.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 130 ~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~------g~~livDe~~~~~~~- 196 (400)
T 3nmy_A 130 AGLDFSFVDLT------DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKH------GLLTVVDNTFASPML- 196 (400)
T ss_dssp HCCEEEEECTT------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTHHHH-
T ss_pred cCeEEEEECCC------CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 58888888764 78999999999999999999999999999999999999999 999999999985443
Q ss_pred ccCCCccccccCCCCcEEEEcCccCCCCCC-C-eE-EEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYA-G-VG-WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~-g-~g-~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
..+ .. .++|.++.+++|++++|. . .| +++.++++.. +.+.......+ . ....+..|.
T Consensus 197 -~~~---~~---~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~-~~l~~~~~~~g----------~--~~~~~~a~~ 256 (400)
T 3nmy_A 197 -QRP---LS---LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELA-EQMAFLQNSIG----------G--VQGPFDSFL 256 (400)
T ss_dssp -CCG---GG---GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH-HHHHHHHHHHC----------C--BCCHHHHHH
T ss_pred -CCh---hh---cCCcEEEecCccccCCCCCcceeEEEEeCCHHHH-HHHHHHHHhcC----------C--CCCHHHHHH
Confidence 111 22 278999999999998773 2 35 4554443222 12111111111 1 113566777
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCCCcc
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSYFYD 364 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~~~~ 364 (369)
.++.+. .+..+ +..+++++++++|++.+.+++
T Consensus 257 ~l~~l~--~l~~r~~~~~~~a~~l~~~L~~~p~v~~ 290 (400)
T 3nmy_A 257 ALRGLK--TLPLRMRAHCENALALAQWLETHPAIEK 290 (400)
T ss_dssp HHHHHT--THHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHhHh--HHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence 777653 34433 889999999999998876654
No 183
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=3.3e-18 Score=166.38 Aligned_cols=212 Identities=13% Similarity=0.000 Sum_probs=148.5
Q ss_pred CCccccccccCC----ChHHHHHHHH--HHhccC--CCCC-CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc
Q 017569 56 PRLNLASFVTTW----MEPECDKLVM--ASINKN--YVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (369)
Q Consensus 56 p~~~l~~~~~~~----~~~~v~~~~~--~~~~~n--~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (369)
..++|+.+.|.+ .++.+.+++. +++... ...| ....+..+++++ +++++++++ ..+++|+|+
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~----ia~~~~~~~-----~~i~~t~G~ 96 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARAL----FAGYLDVKA-----ENVLVWNNS 96 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHH----HHHHTTSCG-----GGEEECSSC
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHH----HHHHhCCCh-----hhEEEeCCc
Confidence 346677766652 2335666654 444322 2344 445567777766 677778775 358999999
Q ss_pred hHHHH--HHHHHHHH--HHHHHHHhcCCCC----CCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHH
Q 017569 127 SEAIM--LAGLAFKR--KWQQKRKEQGKPY----DKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (369)
Q Consensus 127 t~a~~--~al~~~~~--~~~~~~~~~g~~~----~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~ 198 (369)
++++. +++.++.. + |... .+++|+++.++|..+...++..|++++.+|++++ .+|+++|+++
T Consensus 97 ~~al~~~~~~~~l~~~~~--------g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~--g~d~~~l~~~ 166 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVR--------GSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD--GPDVDAVERL 166 (423)
T ss_dssp HHHHHHHHHHHHHHTCCT--------TCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT--EECHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCC--------CccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC--CCCHHHHHHH
Confidence 99997 77776643 1 1000 0368999999999999999999999999999875 4999999999
Q ss_pred Hh--hcCcEEEEe-eCCCCcccCCCHH---HHHHHH-HHhhhccCCCceEEeecccccccccc--cCCC-ccccc----c
Q 017569 199 VD--ENTICVAAI-LGSTLTGEFEDVK---LLHDLL-TKKNEETGWDTPIHVDAASGGFIAPF--LYPD-LEWDF----R 264 (369)
Q Consensus 199 i~--~~~~~v~~~-~~~~~tG~~~~l~---~I~~l~-~~~~~~~~~~~~l~vD~a~~~~~~~~--~~~~-~~~~~----~ 264 (369)
++ +++++|+++ +++||||.+.+.+ +|+++| +++ ++++|+|++|+...+.. ..+. ....+ .
T Consensus 167 l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (423)
T 3ez1_A 167 AGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAP------DFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAG 240 (423)
T ss_dssp HHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSST------TCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHT
T ss_pred HhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhcc------CCEEEEECCcchhhcCCCCCCCCcchhhhhhccC
Confidence 94 678888655 8899999997766 888888 889 99999999998532210 0000 00111 1
Q ss_pred CCCCcEEEEcCccCCCCCCCeEEEEEeC
Q 017569 265 LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 265 ~~~~Dsi~~~~hK~l~~p~g~g~l~~~~ 292 (369)
....+.+..+++|+++.+.+.|+++..+
T Consensus 241 ~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 241 YPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp CTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred CCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 2345677788999877888999988753
No 184
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.76 E-value=3.2e-17 Score=159.11 Aligned_cols=215 Identities=13% Similarity=-0.014 Sum_probs=152.3
Q ss_pred CCcccccccc------CCChHHHHHHHHHHh-cc-CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCch
Q 017569 56 PRLNLASFVT------TWMEPECDKLVMASI-NK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (369)
Q Consensus 56 p~~~l~~~~~------~~~~~~v~~~~~~~~-~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (369)
..+||+.+.+ .++++.+.++.. .+ +. ....|....|..+|++++.+|+.+..+...+. +...+++|+||+
T Consensus 30 ~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~i~~t~G~~ 107 (405)
T 3k7y_A 30 EKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIED-KKICTIQCIGGT 107 (405)
T ss_dssp SCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTT-TCEEEEEEEHHH
T ss_pred CcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccc-cceEEEEcCchH
Confidence 3468876652 123466777766 43 22 34566777899999999999986544433211 111368999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHhh--cCc
Q 017569 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE--NTI 204 (369)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~--~~~ 204 (369)
+|+.+++.++.+- .. ++|++++|+|..+...++..|++++.+|+ +++++.+|+++|++++++ +++
T Consensus 108 ~al~~~~~~l~~~-----------~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 175 (405)
T 3k7y_A 108 GAIFVLLEFLKML-----------NV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGS 175 (405)
T ss_dssp HHHHHHHHHHHTT-----------TC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhc-----------CC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCe
Confidence 9999988877541 12 68999999999999999999999999998 454589999999999975 467
Q ss_pred EEEEeeC-CCCcccCC---CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCc-cc-cccCCCCcEEE-EcCcc
Q 017569 205 CVAAILG-STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFRLPLVKSIN-VSGHK 277 (369)
Q Consensus 205 ~v~~~~~-~~~tG~~~---~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~~~~~~Dsi~-~~~hK 277 (369)
+|+++.+ +||||.+- .+++|+++|+++ ++++++|.+|..+...-..... .. .+...+-..++ -+..|
T Consensus 176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~------~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 249 (405)
T 3k7y_A 176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHK------KHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSK 249 (405)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHH------CCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC------CeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCc
Confidence 8888776 89999984 577899999999 9999999999875431000000 00 11111223333 45888
Q ss_pred CCC-CCCCeEEEEE
Q 017569 278 YGL-VYAGVGWVVW 290 (369)
Q Consensus 278 ~l~-~p~g~g~l~~ 290 (369)
.++ .+++.|++++
T Consensus 250 ~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 250 NMSLYGERAGALHI 263 (405)
T ss_dssp TSCCTTTTEEEEEE
T ss_pred cCCCccccceEEEE
Confidence 875 7899999875
No 185
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.76 E-value=2.9e-17 Score=158.72 Aligned_cols=219 Identities=12% Similarity=0.032 Sum_probs=145.7
Q ss_pred HHHHHHHHHHhhhhcC-CCCccccccccC-CChHHHHHHHHHHhcc-----CCCCCCCCcchHHHHHHHHHHHHHHhC-C
Q 017569 39 KEAAYQVINDELMLDG-NPRLNLASFVTT-WMEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFN-T 110 (369)
Q Consensus 39 ~~~i~~~l~~~~~~~~-~p~~~l~~~~~~-~~~~~v~~~~~~~~~~-----n~~~~~~~~~~~~le~~~~~~la~l~g-~ 110 (369)
.+++.+.+......+. ...++|+...+. ++++.+.+++.++++. ....|....+..++++++.+++. .| +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~~ 93 (400)
T 3asa_A 16 FADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGFV 93 (400)
T ss_dssp HHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTSS
T ss_pred HHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCCC
Confidence 4556555555443333 333456555553 3457778887776643 12334334567777777444432 56 4
Q ss_pred CCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce-eEEEeccCC-cc
Q 017569 111 PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKLEEG-YY 188 (369)
Q Consensus 111 ~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~-v~~v~~~~~-~~ 188 (369)
++ ..+++|+|+++++..++..+ . .+++|+++.++|..+...++..|+. ++.+|++++ .+
T Consensus 94 ~~-----~~v~~~~G~~~al~~~~~~~-~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (400)
T 3asa_A 94 DA-----KEIFISDGAKVDLFRLLSFF-G-------------PNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF 154 (400)
T ss_dssp CG-----GGEEEESCHHHHHHHHHHHH-C-------------SSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred CH-----HHEEEccChHHHHHHHHHHc-C-------------CCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence 43 35899999999997754322 1 1468999999999999999999999 999998642 24
Q ss_pred ccCHHHHHHHHhhcCcEEEEeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-
Q 017569 189 VMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR- 264 (369)
Q Consensus 189 ~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~- 264 (369)
..|+++ + +++++|+++.|+||||.+.| +++|+++|+++ ++++++|++|+.+... +.....+.
T Consensus 155 ~~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~ 220 (400)
T 3asa_A 155 FPEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEH------EILILFDAAYSTFISD---PSLPKSIFE 220 (400)
T ss_dssp CCCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGCCC---TTSCSSGGG
T ss_pred ccChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEEchhhhhhcC---CCCCCchhh
Confidence 444322 1 57889999999999999976 66789999999 9999999999865431 11111221
Q ss_pred CC---CCcEEEEcCccCCC-CCCCeEEEEEeC
Q 017569 265 LP---LVKSINVSGHKYGL-VYAGVGWVVWRT 292 (369)
Q Consensus 265 ~~---~~Dsi~~~~hK~l~-~p~g~g~l~~~~ 292 (369)
.. ..+.+..+++|+++ .+.+.|++++++
T Consensus 221 ~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~ 252 (400)
T 3asa_A 221 IPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ 252 (400)
T ss_dssp STTGGGTEEEEEECCGGGTTTTCCCEEEECCT
T ss_pred CCCCCCceEEEecchhhcCCcchheeEEeeCh
Confidence 21 23466788999985 445689998754
No 186
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.75 E-value=7.2e-18 Score=160.09 Aligned_cols=223 Identities=13% Similarity=0.030 Sum_probs=143.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH-
Q 017569 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK- 169 (369)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~- 169 (369)
+...+++ +++++++|.+. .++++||++|+.+++.++..+ | ++++|+++.+.|++...
T Consensus 47 ~~~~~l~----~~la~~~~~~~-------~i~~~~G~~a~~~al~~~~~~--------g---d~~~vi~~~~~~~~~~~~ 104 (357)
T 3lws_A 47 AIIEPFE----QKFADVLGMDD-------AVFFPSGTMAQQVALRIWSDE--------T---DNRTVAYHPLCHLEIHEQ 104 (357)
T ss_dssp TTHHHHH----HHHHHHHTCSE-------EEEESCHHHHHHHHHHHHHHH--------H---TCCEEEECTTCHHHHSST
T ss_pred hHHHHHH----HHHHHHhCCCc-------EEEecCcHHHHHHHHHHHhhc--------C---CCcEEEecccceeeeecc
Confidence 4555555 45888888864 577789999999998887664 1 11278888888876554
Q ss_pred --HHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc-ccCC---CHHHHHHHHHHhhhccCCCceEEe
Q 017569 170 --FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-GEFE---DVKLLHDLLTKKNEETGWDTPIHV 243 (369)
Q Consensus 170 --~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-G~~~---~l~~I~~l~~~~~~~~~~~~~l~v 243 (369)
.+...|+.++.+|. +++.+|+++|+++. ++++|+++.|+||+ |.+. ++++|+++|+++ ++++|+
T Consensus 105 ~~~~~~~g~~~~~v~~--~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~------~~~li~ 174 (357)
T 3lws_A 105 DGLKELHPIETILVGA--ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER------GIRLHL 174 (357)
T ss_dssp THHHHHSSCEEEECSC--TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT------TCEEEE
T ss_pred chhhhccCcEEEEecC--CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc------CCEEEE
Confidence 34555777777764 34789999999883 48999999999998 8875 499999999999 999999
Q ss_pred ecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchh
Q 017569 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (369)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~ 323 (369)
|+||......+.... ...+ ...+|.++.++||++++|.| |+++. +++.. ..+.......+.... + ...
T Consensus 175 D~a~~~~~~~~~~~~-~~~~-~~~~d~~~~s~sK~~~~~~g-g~~~~-~~~~~-~~~~~~~~~~~~~~~------~-~~~ 242 (357)
T 3lws_A 175 DGARLFEMLPYYEKT-AAEI-AGLFDSIYISFYKGLGGIAG-AILAG-PAAFC-QTARIWKRRYGGDLI------S-LYP 242 (357)
T ss_dssp EETTHHHHHHHHTCC-HHHH-HTTSSEEEEESSSTTCCSSC-EEEEE-CHHHH-HHHHHHHHHTTCCCS------C-CHH
T ss_pred ECchhhhhhhhcCCC-hHHH-HhcCCEEEEeccccCCCCce-EEEEc-CHHHH-HHHHHHHHHhcCCcc------c-chH
Confidence 999863222111111 1111 13578899999999988887 77765 33332 121110011111000 0 111
Q ss_pred HHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 324 QIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 324 ~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.+.....+++.+ .+.+ +..++++++++.|++.+-
T Consensus 243 ~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~L~~~~g 277 (357)
T 3lws_A 243 YIVSADYYYELR----KDRMGQYYEQAKQLAEQFNALPG 277 (357)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCC
Confidence 122222333321 1223 567888999999998743
No 187
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.75 E-value=1.9e-17 Score=156.06 Aligned_cols=234 Identities=16% Similarity=0.103 Sum_probs=161.6
Q ss_pred CChHHHHHHHHHHhcc-CCCCCCCCcchHHHHHHHHHHHHHHhC---CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFN---TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g---~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (369)
++++.+.+++.+++.. ....|. .++..+++++ ++++++ +++ ...++|+|+++++..++.++
T Consensus 32 ~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~----la~~~~~~~~~~-----~~v~~~~G~~~al~~~~~~~----- 96 (335)
T 1uu1_A 32 PFPEDLVDEVFRRLNSDALRIYY-DSPDEELIEK----ILSYLDTDFLSK-----NNVSVGNGADEIIYVMMLMF----- 96 (335)
T ss_dssp CCCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHH----HHHHHTCSSCCG-----GGEEEESSHHHHHHHHHHHS-----
T ss_pred CCCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHH----HHHHcCCCCCCH-----HHEEEcCChHHHHHHHHHHh-----
Confidence 3467788888888732 222332 2345566655 666666 553 35899999999998888775
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHH
Q 017569 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (369)
Q Consensus 143 ~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~ 222 (369)
+++|+++ ++|..+...++..|++++.+|++++ +.+|+++| +++++|+++.|+||||.+.|.+
T Consensus 97 -----------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~ 158 (335)
T 1uu1_A 97 -----------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVNV-----GEGDVVFIPNPNNPTGHVFERE 158 (335)
T ss_dssp -----------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTT-SCCCCCCC-----CTTEEEEEESSCTTTCCCCCHH
T ss_pred -----------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCC-CCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHH
Confidence 1589999 9999999999999999999998754 78888877 5788999999999999999999
Q ss_pred HHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcCccCCC-CCCCeEEEEEeCCCCccccc
Q 017569 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDEL 300 (369)
Q Consensus 223 ~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~ 300 (369)
++.++++.. + ++++|++|+.+.. .+ ... +.....+.+..+.+|+++ .+.+.|+++++ ++.. ..+
T Consensus 159 ~l~~l~~~~------~-~li~De~~~~~~~---~~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l 224 (335)
T 1uu1_A 159 EIERILKTG------A-FVALDEAYYEFHG---ES--YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS-EKFI-DAY 224 (335)
T ss_dssp HHHHHHHTT------C-EEEEECTTHHHHC---CC--CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC-HHHH-HHH
T ss_pred HHHHHHHhC------C-EEEEECcchhhcc---hh--HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC-HHHH-HHH
Confidence 999999999 9 9999999986432 11 011 122345677888999985 34568999884 3222 222
Q ss_pred ccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 301 ~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.... .. ++.+ .+.++++...+.. +.++++ +..++.+++.+.|++.|+
T Consensus 225 ~~~~-------~~----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 274 (335)
T 1uu1_A 225 NRVR-------LP----FNVS---YVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY 274 (335)
T ss_dssp HHHS-------CT----TCSC---HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhc-------CC----CCcC---HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 1100 01 1222 2333333333322 345555 788889999999988753
No 188
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.75 E-value=1.4e-17 Score=162.41 Aligned_cols=211 Identities=16% Similarity=0.011 Sum_probs=146.8
Q ss_pred CCccccccccCCCh----HHHHHHH--HHHhccC---CCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc
Q 017569 56 PRLNLASFVTTWME----PECDKLV--MASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (369)
Q Consensus 56 p~~~l~~~~~~~~~----~~v~~~~--~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (369)
..++|..+.|.+.. +.+.+++ .++++.. ...|....+..+++++ +++++++++ ..+++|+|+
T Consensus 34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~----ia~~~~~~~-----~~i~~t~G~ 104 (427)
T 3ppl_A 34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQI----WADLLGVPV-----EQVLAGDAS 104 (427)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHH----HHHHHTSCG-----GGEEECSSC
T ss_pred ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHH----HHHHhCCCc-----ceEEEeCCc
Confidence 34666666654321 1244444 4444432 3444444577777776 566667765 358999999
Q ss_pred hHHHH--HHHHHHHHHHHHHHHhcCCC-----CCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 127 SEAIM--LAGLAFKRKWQQKRKEQGKP-----YDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 127 t~a~~--~al~~~~~~~~~~~~~~g~~-----~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
++++. +++.++.+.. +|.+ ..+++|+++.++|..+...++..|++++.+|++++ + +|+++|++++
T Consensus 105 ~~al~~~~~~~~l~~~~------~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~l~~~l 176 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGN------NDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-G-PDMDAVEELV 176 (427)
T ss_dssp HHHHHHHHHHHHHHHCC------TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-E-ECHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccC------CcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-C-CCHHHHHHHH
Confidence 99994 6666664400 0000 01478999999999999999999999999999875 4 9999999999
Q ss_pred h-hcCcEEEEe-eCCCCcccCCCHH---HHHHHH-HHhhhccCCCceEEeecccccccccccCCC-ccccc-------cC
Q 017569 200 D-ENTICVAAI-LGSTLTGEFEDVK---LLHDLL-TKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWDF-------RL 265 (369)
Q Consensus 200 ~-~~~~~v~~~-~~~~~tG~~~~l~---~I~~l~-~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~~-------~~ 265 (369)
+ +++++|+++ +++||||.+.+.+ +|+++| +++ ++++|+|++|+.+.+ .... ...++ ..
T Consensus 177 ~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~ 248 (427)
T 3ppl_A 177 KNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP------DFRVVWDNAYAVHTL--TDEFPEVIDIVGLGEAAGN 248 (427)
T ss_dssp TSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST------TCEEEEECTTTTCBS--SSCCCCCCCHHHHHHHTTC
T ss_pred hcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC------CCEEEEECCCccccc--CCCCCCccchhhhhhccCC
Confidence 5 578888766 8899999997766 888888 899 999999999987443 1111 01111 12
Q ss_pred CCCcEEEEcCccCCCCCCCeEEEEEe
Q 017569 266 PLVKSINVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 266 ~~~Dsi~~~~hK~l~~p~g~g~l~~~ 291 (369)
.+.+.+..+++|+++.+.+.|+++..
T Consensus 249 ~~~~i~~~S~SK~~~~G~r~G~~~~~ 274 (427)
T 3ppl_A 249 PNRFWAFTSTSKITLAGAGVSFFLTS 274 (427)
T ss_dssp TTSEEEEEESTTTSCTTSSCEEEECC
T ss_pred CCcEEEEechhhccCcCccEEEEEcC
Confidence 34567778899998778899988764
No 189
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.75 E-value=3.7e-17 Score=156.07 Aligned_cols=252 Identities=13% Similarity=0.018 Sum_probs=153.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+++.+.+++.+.++........++. ....++++++++++|++ ..+++|+||++|+.+++.+++.... +
T Consensus 45 ~~~~v~~a~~~~~~~~~~~~~~y~~--~~~~~l~~~la~~~g~~------~~v~~~~g~t~a~~~~~~~~~~~~~--~-- 112 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKLLHVSNLYEN--PWQEELAHKLVKHFWTE------GKVFFANSGTESVEAAIKLARKYWR--D-- 112 (375)
T ss_dssp SCHHHHHHHHHHHHHCSCCCTTBCC--HHHHHHHHHHHHTSSSC------EEEEEESSHHHHHHHHHHHHHHHHH--H--
T ss_pred CCHHHHHHHHHHHHhccccCcccCC--HHHHHHHHHHHhhcCCC------CeEEEeCchHHHHHHHHHHHHHHhc--c--
Confidence 4577888888777543111011221 12335566789989883 1389999999999999876432110 0
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcceeE----EEeccCCccc----cCHHHHHHHHhhcCcEEEEeeCCCCcccCC
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~----~v~~~~~~~~----~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (369)
+.+ .+++|++++++|..+...+..++.... ..|++.+ .. +|+++|++++++++++|+++.++||||.+.
T Consensus 113 -~~~-g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~ 189 (375)
T 2eh6_A 113 -KGK-NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPG-FSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNE 189 (375)
T ss_dssp -TTC-CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSS-EEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEE
T ss_pred -CCC-CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCC-ceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcC
Confidence 001 126899998886554443333322110 0111111 11 589999999988899999999999999997
Q ss_pred C----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccC--CCCcEEEEcCccCCCCCCCeEEEEEeCC
Q 017569 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (369)
Q Consensus 220 ~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~Dsi~~~~hK~l~~p~g~g~l~~~~~ 293 (369)
| +++|.++|+++ ++++|+|++|+++.. . +. .+.+.. ..+|.+++| |+++++.++|+++++++
T Consensus 190 ~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~--~-~~-~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~ 257 (375)
T 2eh6_A 190 ASEDFLSKLQEICKEK------DVLLIIDEVQTGIGR--T-GE-FYAYQHFNLKPDVIALA--KGLGGGVPIGAILAREE 257 (375)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--T-SS-SSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHH
T ss_pred CCHHHHHHHHHHHHHh------CCEEEEeccccCCCC--C-Cc-chhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHH
Confidence 7 99999999999 999999999995322 1 11 112221 137888777 77778889999998752
Q ss_pred CCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcCC
Q 017569 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g~ 361 (369)
.. +.+.. ..+ + ..+ ++ +......+..+|+.+. ... +..++++++++.|++.+.
T Consensus 258 -~~-~~~~~-~~~-~---~~~---~~-~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~L~~~~~ 311 (375)
T 2eh6_A 258 -VA-QSFTP-GSH-G---STF---GG-NPLACRAGTVVVDEVE----KLLPHVREVGNYFKEKLKELGK 311 (375)
T ss_dssp -HH-TTCCT-TSC-C---CSS---TT-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTS
T ss_pred -HH-hhhcC-CCC-C---CCC---CC-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 21 22111 000 0 011 12 1222222233444432 333 888899999999998764
No 190
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.75 E-value=9.5e-18 Score=159.28 Aligned_cols=243 Identities=15% Similarity=0.061 Sum_probs=151.2
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+.+..+. +...+... ++++++++++|.+. .++++||++|+.+++.++..+
T Consensus 28 ~p~v~~ai~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~~-------~i~~~~g~~a~~~a~~~~~~~-------- 86 (359)
T 3pj0_A 28 LTEALQNIDDNLESDI--YGNGAVIE----DFETKIAKILGKQS-------AVFFPSGTMAQQIALRIWADR-------- 86 (359)
T ss_dssp HHHHTTTSCTTCBCCB--TTBSHHHH----HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHHHH--------
T ss_pred CHHHHHHHHhhcccCc--ccCCHHHH----HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHHhc--------
Confidence 4556665555433222 22233444 45556889999874 477799999999999887664
Q ss_pred CCCCCCCeEEecCCCcchHHHH---HhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc-ccCCCHH--
Q 017569 149 GKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-GEFEDVK-- 222 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-G~~~~l~-- 222 (369)
| +...|+++.+.|+..... +...|+.++.+|.+ ++.+|+++|+++ .+++++|+++.|+||+ |.+.|.+
T Consensus 87 g---~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l 160 (359)
T 3pj0_A 87 K---ENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA--NQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEEL 160 (359)
T ss_dssp H---TCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT--TSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHH
T ss_pred C---CCcEEEEeccceeeehhcchHHHhcCceEEecCCc--CCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHH
Confidence 1 012477777777665432 24568888888763 479999999998 7789999999999888 6876654
Q ss_pred -HHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCCcccccc
Q 017569 223 -LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (369)
Q Consensus 223 -~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 301 (369)
+|+++|+++ ++++|+|++|..+...+.... ...+ ..++|.+++++||++++|.| |+++. +++.. +.+.
T Consensus 161 ~~l~~~~~~~------~~~li~D~a~~~~~~~~~~~~-~~~~-~~~~d~~~~s~sK~~~~~~g-g~~~~-~~~l~-~~~~ 229 (359)
T 3pj0_A 161 EKISEYCHEQ------GISLHLDGARLWEITPFYQKS-AEEI-CALFDSVYVSFYKGIGGIAG-AILAG-NDDFV-QEAK 229 (359)
T ss_dssp HHHHHHHHHH------TCEEEEEETTCGGGHHHHTCC-HHHH-HTTCSEEEEESSSTTCCSSC-EEEEE-CHHHH-HHHH
T ss_pred HHHHHHHHHc------CCEEEEECcchhcchhhhCCC-HHHh-hccCCEEEEeccccCCCcce-EEEEC-CHHHH-HHHH
Confidence 559999999 999999999865432211111 1112 14679999999999888866 66654 33332 2211
Q ss_pred cccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-HhhHHHHHHHHHHHhcC
Q 017569 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 302 ~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~~~~a~~l~~~L~~~g 360 (369)
......+... .+ ....+.+...++... ...+ +..++++++++.|++.+
T Consensus 230 ~~~~~~~~~~------~~-~~~~~~a~~~~l~~~----~~~~~~~~~~~~~l~~~L~~~~ 278 (359)
T 3pj0_A 230 IWKRRYGGDL------IS-LYPYILSADYYFEKR----IGKMAEYFEAAKGLAERFNSCS 278 (359)
T ss_dssp HHHHHTTCCC------SC-CHHHHHHHHHHHHHH----GGGHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHhCCCc------ch-hHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHhhCC
Confidence 1001111100 00 111122222333322 2334 77888999999999874
No 191
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.75 E-value=2.2e-17 Score=156.45 Aligned_cols=248 Identities=14% Similarity=-0.013 Sum_probs=163.8
Q ss_pred CCCccccccccC-CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHH
Q 017569 55 NPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (369)
Q Consensus 55 ~p~~~l~~~~~~-~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (369)
+..++|+...+. ++++.+.+++.+.+... ..|....+ . ++++++++++|+++ ...++|+|+++|+.++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~-~~y~~~~~-~----~lr~~la~~~~~~~-----~~i~~t~g~~~al~~~ 83 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCI-RHYPEPDA-G----TLRQMLAKRNSVDN-----NAILVTNGPTAAFYQI 83 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGG-GSCCCTTC-H----HHHHHHHHHTTCCG-----GGEEEESHHHHHHHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHH-hcCCCCcH-H----HHHHHHHHHhCcCH-----HHEEEcCCHHHHHHHH
Confidence 344455444333 34577888888877332 22222222 3 45556888889875 3589999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHHHhhcCcEEEEeeCC
Q 017569 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDENTICVAAILGS 212 (369)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (369)
+.++. +++|+++.++|..+...++..|++++.+|+ +++ ..+++ +++++|++++|+
T Consensus 84 ~~~l~---------------gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~--------~~~~~v~i~~p~ 139 (350)
T 3fkd_A 84 AQAFR---------------GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI-GEADF--------SNMDFCWLCNPN 139 (350)
T ss_dssp HHHTT---------------TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCG-GGSCC--------TTCSEEEEESSC
T ss_pred HHHHC---------------CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcc-ccCcc--------CCCCEEEEeCCC
Confidence 88763 368999999999999999999999999999 652 34444 678999999999
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEEEEEe
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~l~~~ 291 (369)
||||.+.|+++|.++++.+. ..++++|++|+.+... .+.....+.....+.+..+++|+++ .+.+.|+++.
T Consensus 140 nptG~~~~~~~l~~l~~~~~-----~~~li~Dea~~~~~~~--~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~- 211 (350)
T 3fkd_A 140 NPDGRLLQRTEILRLLNDHP-----DTTFVLDQSYVSFTTE--EVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA- 211 (350)
T ss_dssp TTTCCCCCHHHHHHHHHHCT-----TSEEEEECTTTTSCSS--CCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEEC-
T ss_pred CCcCCCCCHHHHHHHHHhCC-----CCEEEEECchhhhccC--cchhhHHhhcCCCEEEEecCchhccCcchheEeEEe-
Confidence 99999999999999999882 2699999999864431 1111122223345577778999986 5577899887
Q ss_pred CCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhh-H-HHH-HhhHHHHHHHHHHHhcC
Q 017569 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEV-I-PSF-CCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G-~-~~~-~~~~~a~~l~~~L~~~g 360 (369)
+++.. +.+.... .. ++- ..+.++++...+...+ + +.+ +..++.+++.+.|++.+
T Consensus 212 ~~~~~-~~~~~~~-------~~----~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 268 (350)
T 3fkd_A 212 NKDFM-KRVAAFS-------TP----WAV---NALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLD 268 (350)
T ss_dssp CHHHH-HHHHTTC-------CT----TCS---CHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHST
T ss_pred CHHHH-HHHHHhC-------CC----CCC---CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33222 2211100 01 111 2344444444443222 2 222 44588899999998873
No 192
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.74 E-value=1.1e-16 Score=154.38 Aligned_cols=247 Identities=11% Similarity=-0.070 Sum_probs=159.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.++.+.+++.++++........+ ......++++.+++++|.+ .+++|+||++|+..++.+++.....
T Consensus 57 ~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~gg~~a~~~al~~~~~~~~~---- 123 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIHCSNLF--WNRPQMELAELLSKNTFGG-------KVFFANTGTEANEAAIKIARKYGKK---- 123 (397)
T ss_dssp TCHHHHHHHHHHHHHCSCCCTTS--EEHHHHHHHHHHHHTTTSC-------EEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhcccCcccc--CCHHHHHHHHHHHHhcCCC-------eEEEeCCHHHHHHHHHHHHHHHhhc----
Confidence 35778888888775532211112 2345567777899998854 3899999999999999887642110
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
|.+ .+++|++++++ |.++..+++..|.. ++.+|.+ |+++|++++++++++|+++.++||
T Consensus 124 -~~~-~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~------d~~~l~~~l~~~~~~v~~~~~~np 195 (397)
T 2ord_A 124 -KSE-KKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN------NVEDLRRKMSEDVCAVFLEPIQGE 195 (397)
T ss_dssp -HCT-TCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT------CHHHHHHHCCTTEEEEEECSEECT
T ss_pred -CCC-CCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC------CHHHHHHHhhcCeEEEEEecccCC
Confidence 000 13467766655 45556567777765 5556542 799999999988999999999999
Q ss_pred ccc----CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccc-cccCCCCcEEEEcCccCCCCCCCeEEEE
Q 017569 215 TGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (369)
Q Consensus 215 tG~----~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Dsi~~~~hK~l~~p~g~g~l~ 289 (369)
||. .+++++|.++|+++ ++++++|++|+++.. ....... .+. ...|.+++ +|+++++.+.|+++
T Consensus 196 tG~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~-~~~d~~s~--sK~~~~G~r~G~~~ 264 (397)
T 2ord_A 196 SGIVPATKEFLEEARKLCDEY------DALLVFDEVQCGMGR--TGKLFAYQKYG-VVPDVLTT--AKGLGGGVPIGAVI 264 (397)
T ss_dssp TTCEECCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSHHHHHT-CCCSEEEE--CGGGGTTSCCEEEE
T ss_pred CCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--CccchhhhhhC-CCCCeeee--ccccCCCcCeEEEE
Confidence 999 37899999999999 999999999985322 1111111 111 13677754 69988778899999
Q ss_pred EeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
++++ .. .+.. . ..... .+.+.....++..+|+.+..+.+.+ +..++++++.+.|++.
T Consensus 265 ~~~~-~~--~l~~--~---~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~l~~~L~~~ 321 (397)
T 2ord_A 265 VNER-AN--VLEP--G---DHGTT----FGGNPLACRAGVTVIKELTKEGFLE-EVEEKGNYLMKKLQEM 321 (397)
T ss_dssp ECST-TC--CCCT--T---SSCCS----STTCHHHHHHHHHHHHHHTSTTHHH-HHHHHHHHHHHHHHHH
T ss_pred EchH-hc--ccCC--C---CcCCC----CCCCHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHH
Confidence 8654 22 2211 0 00011 1222333444555666654432221 7788888999988775
No 193
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.74 E-value=4.5e-17 Score=157.71 Aligned_cols=278 Identities=14% Similarity=0.030 Sum_probs=169.5
Q ss_pred CCcccccccc-CC-ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe--EEeCCchHHHH
Q 017569 56 PRLNLASFVT-TW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG--VGTVGSSEAIM 131 (369)
Q Consensus 56 p~~~l~~~~~-~~-~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~--~~t~Ggt~a~~ 131 (369)
..++|+.+.+ .. .++.+.+.+.++.......|....+..++++++.+|+ .|.+......... ..|.||++|+.
T Consensus 42 ~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~---~~~~~~~~~~~~i~~~~~~~g~ga~~ 118 (409)
T 4eu1_A 42 RKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLC---FGPTCAALRDGRIASCQTLGGTGALR 118 (409)
T ss_dssp SCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHH---HCSSCHHHHTTCEEEEEESHHHHHHH
T ss_pred CceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHH---cCCCchhhccCceeeeecccchHHHH
Confidence 3367776665 32 2344566666664444455555667888988877766 3544100000123 45899999997
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc-CCccccCHHHHHHHHhh---cCcEEE
Q 017569 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE---NTICVA 207 (369)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~---~~~~v~ 207 (369)
.+...++.- ...+++|+++.++|..+...++..|++++.+|++ ++++.+|+++|++++++ ++++++
T Consensus 119 ~~~~~~~~~----------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~ 188 (409)
T 4eu1_A 119 IGGDLLNRF----------VANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILV 188 (409)
T ss_dssp HHHHHGGGT----------SSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHh----------cCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEE
Confidence 765543321 1124799999999999999999999999999984 44589999999999973 456677
Q ss_pred EeeCCCCcccCCC---HHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCcc-ccccCCCCcEE-EEcCccCCC-
Q 017569 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLE-WDFRLPLVKSI-NVSGHKYGL- 280 (369)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~-~~~~~~~~Dsi-~~~~hK~l~- 280 (369)
++.|+||||.+.+ +++|+++|+++ ++++++|++|+.+...-.. +... ..+.....+.+ ..+..|.++
T Consensus 189 ~~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 262 (409)
T 4eu1_A 189 HACAHNPTGVDPTHDDWRQVCDVIKRR------NHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGL 262 (409)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSC
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccC
Confidence 7999999999866 56699999999 9999999999875531000 0000 01111123333 446779875
Q ss_pred CCCCeEEE--EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc--------HhhHHHH--HhhHH
Q 017569 281 VYAGVGWV--VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--------FEVIPSF--CCVDH 348 (369)
Q Consensus 281 ~p~g~g~l--~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg--------~~G~~~~--~~~~~ 348 (369)
.+.+.|++ ++.+++.. +.+........ ...+ .+. ..+.++++...+. .+.+.++ +..++
T Consensus 263 ~G~riG~~~~v~~~~~~~-~~l~~~~~~~~---~~~~--~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (409)
T 4eu1_A 263 YGHRCGALHISTASAEEA-KRLVSQLALLI---RPMY--NNP---PLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEV 333 (409)
T ss_dssp GGGCCEEEEEECSSHHHH-HHHHHHHHHHH---HHHH--SSC---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEEeCCHHHH-HHHHHHHHHHH---hhhc--CCC---ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45678887 55544311 00100000000 0000 011 1233333333332 2334444 78888
Q ss_pred HHHHHHHHHhcCC
Q 017569 349 KKLSSFFVIHSSY 361 (369)
Q Consensus 349 a~~l~~~L~~~g~ 361 (369)
.+++.+.|++.|.
T Consensus 334 ~~~l~~~L~~~g~ 346 (409)
T 4eu1_A 334 RKRLVSELKACGS 346 (409)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998863
No 194
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.73 E-value=1.7e-17 Score=160.33 Aligned_cols=210 Identities=17% Similarity=0.024 Sum_probs=146.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHhh
Q 017569 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (369)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~----~~~~ 173 (369)
.++++.+++++|.+. .+++++|++|+.+++. +..+ +++|+++.+.|.+... .++.
T Consensus 58 ~~lr~~la~~~g~~~-------~i~~~sGt~a~~~al~-~~~~-------------gd~Vi~~~~~y~~~~~~~~~~~~~ 116 (393)
T 1n8p_A 58 ENLERAVAALENAQY-------GLAFSSGSATTATILQ-SLPQ-------------GSHAVSIGDVYGGTHRYFTKVANA 116 (393)
T ss_dssp HHHHHHHHHHTTCSE-------EEEESCHHHHHHHHHH-TSCS-------------SCEEEEESSCCHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhCCCc-------EEEECChHHHHHHHHH-HcCC-------------CCEEEEeCCCchHHHHHHHHHHHH
Confidence 355666899998863 6777777999999888 5321 4689999999885443 4567
Q ss_pred hcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccccccc
Q 017569 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (369)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (369)
.|++++.+|++ | ++|+++++++|++|++++++||+|.+.|+++|+++|++++. ..++++|+|++|+.+..
T Consensus 117 ~G~~v~~v~~~------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~--~~~~~livD~a~~~~~~- 186 (393)
T 1n8p_A 117 HGVETSFTNDL------L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAA--GQDVILVVDNTFLSPYI- 186 (393)
T ss_dssp TCSCCEEESSH------H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTT--TTTCEEEEECTTTHHHH-
T ss_pred cCcEEEEeCCC------h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCC--CCCCEEEEeCCcccccc-
Confidence 79999998865 7 89999999899999999999999999999999999999821 11699999999987654
Q ss_pred ccCCCccccccCCCCcEEEEcCccCCCCCCC--e-EEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHH
Q 017569 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--V-GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g--~-g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~ 330 (369)
.. ... .++|.++.++||+++ |.| . |+++.++++.. ..+....... |++.. ....|.
T Consensus 187 -~~---~~~---~~~di~~~S~sK~~g-~~G~rigG~~~~~~~~~~-~~l~~~~~~~----------g~~~~--~~~~~~ 245 (393)
T 1n8p_A 187 -SN---PLN---FGADIVVHSATKYIN-GHSDVVLGVLATNNKPLY-ERLQFLQNAI----------GAIPS--PFDAWL 245 (393)
T ss_dssp -CC---GGG---GTCSEEEEETTTTTT-CSSCCCCEEEEESCHHHH-HHHHHHHHHH----------CCCCC--HHHHHH
T ss_pred -CC---HHH---cCCeEEEEECccccc-CCCCceeEEEEeCCHHHH-HHHHHHHHhc----------CCCCC--HHHHHH
Confidence 11 112 268999999999985 444 5 88877543332 1211100001 11111 334444
Q ss_pred HHHHhcHhhHHHH--HhhHHHHHHHHHHHhcCC
Q 017569 331 QFIRLGFEVIPSF--CCVDHKKLSSFFVIHSSY 361 (369)
Q Consensus 331 ~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~g~ 361 (369)
.+..+. .+... +..++++++++.|++.+.
T Consensus 246 ~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 246 THRGLK--TLHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHHHHT--THHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred HHhccc--hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 444442 23333 677888999999988765
No 195
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.73 E-value=1e-16 Score=157.75 Aligned_cols=199 Identities=13% Similarity=0.087 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 017569 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (369)
Q Consensus 70 ~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (369)
+.+.+++.+++..+...|...++..++++ ++++++|.+. +++|+||++|+..++.+++++.... .|
T Consensus 53 ~~v~~a~~~~l~~~~~~y~~~~~~~~l~~----~la~~~~~~~-------v~~t~~gt~A~~~al~~~~~~~~~~---~G 118 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGDEAYSGSRSYYALAE----SVKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKKREQE---KG 118 (467)
T ss_dssp SCCCHHHHHHTTSCCCCSSSCHHHHHHHH----HHHHHHCCSE-------EEEEC--CCSHHHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHHhccCcceeccCchhHHHHH----HHHHHhCcCc-------EEEcCCcHHHHHHHHHHHhcccccc---CC
Confidence 55677777777554334545555555555 4788888753 8999999999999999987641100 12
Q ss_pred CCCCCCeEEecCCCcch-HHHHHhhhcceeEEE------ecc---CCccccCHHHHHHHHhh----cCcEEEEeeCCCCc
Q 017569 150 KPYDKPNIVTGANVQVC-WEKFARYFEVELKEV------KLE---EGYYVMNPVKAVELVDE----NTICVAAILGSTLT 215 (369)
Q Consensus 150 ~~~~~~~Vi~s~~~h~s-~~~~~~~~G~~v~~v------~~~---~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~t 215 (369)
.+ .+++|+++ ..|+. +.......|..+... +.+ +.++.+|+++|+++|++ ++++|+++.++|++
T Consensus 119 ~~-~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~ 196 (467)
T 2oqx_A 119 LD-RSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSA 196 (467)
T ss_dssp CC-TTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGG
T ss_pred CC-ccceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCC
Confidence 11 00457766 56644 333444455554432 222 12468999999999984 78999999999998
Q ss_pred -ccC---CCHHHHHHHHHHhhhccCCCceEEeeccccc-ccc-------cccCCCcccccc---CCCCcEEEEcCccCCC
Q 017569 216 -GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGG-FIA-------PFLYPDLEWDFR---LPLVKSINVSGHKYGL 280 (369)
Q Consensus 216 -G~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~-~~~-------~~~~~~~~~~~~---~~~~Dsi~~~~hK~l~ 280 (369)
|.+ +++++|+++|+++ |+|+|+|++++. ... .+ .......+. ...+|++++++||+++
T Consensus 197 gG~~~~~~~l~~i~~la~~~------gi~li~D~a~~~e~~~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~s~sK~~g 269 (467)
T 2oqx_A 197 GGQPVSLANLKAMYSIAKKY------DIPVVMDSARFAENAYFIKQREAEY-KDWTIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_dssp GCBCCCHHHHHHHHHHHHHT------TCCEEEECTTHHHHHHHHHHHCGGG-TTSCHHHHHHHHGGGCSEEEEESSSTTC
T ss_pred CCccCCHHHHHHHHHHHHHc------CCEEEEEchhhhhhhhhcccccccc-cCccHHHHhhhhhccCCeEEEecccccC
Confidence 665 5689999999999 999999987654 221 00 111011111 1347888999999997
Q ss_pred CCCCeEEEEEeC
Q 017569 281 VYAGVGWVVWRT 292 (369)
Q Consensus 281 ~p~g~g~l~~~~ 292 (369)
.|.| |+++.++
T Consensus 270 ~~~G-g~~~~~~ 280 (467)
T 2oqx_A 270 VPMG-GLLCMKD 280 (467)
T ss_dssp CSSC-EEEEECS
T ss_pred CCCc-eEEEecC
Confidence 7755 6666554
No 196
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.72 E-value=2.8e-16 Score=151.57 Aligned_cols=248 Identities=12% Similarity=-0.049 Sum_probs=154.1
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+++.........+ ......++++++++++|.+. +++|+||++|+..++.+++..+..+
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~-------v~~~~gg~~a~~~al~~~~~~~~~~---- 123 (406)
T 4adb_A 57 HPELREALNEQASKFWHTGNGY--TNEPVLRLAKKLIDATFADR-------VFFCNSGAEANEAALKLARKFAHDR---- 123 (406)
T ss_dssp CHHHHHHHHHHHTTCSCCCTTS--CCHHHHHHHHHHHHHSSCSE-------EEEESSHHHHHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHhcccccCCc--CCHHHHHHHHHHHhhCCCCe-------EEEeCcHHHHHHHHHHHHHHHHHhc----
Confidence 5778888888876543322222 22345677788999998763 8999999999999999876532211
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcc-------------eeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCc
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (369)
|.+ .+++|++++++|..+...+..++. ++..+|. .|+++|++++++++++|+++ |+||+
T Consensus 124 ~~~-g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~v~~~-p~np~ 195 (406)
T 4adb_A 124 YGS-HKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY------NDINSASALIDDSTCAVIVE-PIQGE 195 (406)
T ss_dssp TCT-TCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT------TCHHHHHTTCSTTEEEEEEC-SEETT
T ss_pred CCC-CCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC------CcHHHHHHHhcCCeEEEEEe-CCcCC
Confidence 111 136788877776654333333332 2333332 37999999999889999888 99999
Q ss_pred ccC-----CCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 216 GEF-----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 216 G~~-----~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
|.+ +++++|.++|+++ ++++|+|++|+++.. .......+..-...|.+++ +|+++++.+.|+++.
T Consensus 196 g~~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~ 265 (406)
T 4adb_A 196 GGVVPASNAFLQGLRELCNRH------NALLIFDEVQTGVGR--TGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLA 265 (406)
T ss_dssp TTSEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE
T ss_pred CCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEE
Confidence 965 4799999999999 999999999975322 1111111111224677765 899876667899887
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+++ .. +.+.. . .. ..+ .+-+.....++..+++.+..+.+.+ +..++++++++.|++.
T Consensus 266 ~~~-~~-~~~~~---~-~~---~~~--~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 266 TEE-CA-RVMTV---G-TH---GTT--YGGNPLASAVAGKVLELINTPEMLN-GVKQRHDWFVERLNTI 322 (406)
T ss_dssp CHH-HH-HTCCT---T-SS---CCS--STTCHHHHHHHHHHHHHHSSHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cHH-HH-hhhcc---C-Cc---CCC--CCCCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHH
Confidence 532 21 11110 0 00 001 1222223344445555554322221 7788888898888775
No 197
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.70 E-value=2.5e-16 Score=153.32 Aligned_cols=213 Identities=15% Similarity=0.036 Sum_probs=141.4
Q ss_pred CccccccccC----CChHHHHHHHHHHh-c-c--CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchH
Q 017569 57 RLNLASFVTT----WMEPECDKLVMASI-N-K--NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (369)
Q Consensus 57 ~~~l~~~~~~----~~~~~v~~~~~~~~-~-~--n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (369)
.++|+.+.+. +.++.+.+++.+.+ . . ....|....+..+++++ +++++|+++ ..+++|+|+++
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~----ia~~~~~~~-----~~i~~t~G~~~ 104 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIREL----WAEALGLPA-----DLVVAQDGSSL 104 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHH----HHHHHTCCG-----GGEEECSSCHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHH----HHHHhCCCh-----hHEEEecchHH
Confidence 4566666664 22334555554432 1 1 13345444567777777 555567765 34899999999
Q ss_pred HH--HHHHHHHHHHHHHHHHhcCCCC----CCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-
Q 017569 129 AI--MLAGLAFKRKWQQKRKEQGKPY----DKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE- 201 (369)
Q Consensus 129 a~--~~al~~~~~~~~~~~~~~g~~~----~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~- 201 (369)
++ .+++.++...+ ..|... ++++|+++.++|..+...++..|++++.+|++++ + +|+++|++++++
T Consensus 105 al~l~~~~~~l~~~~-----~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~l~~~l~~~ 177 (422)
T 3d6k_A 105 NIMFDLISWSYTWGN-----NDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-G-PDMGVVRELVKDP 177 (422)
T ss_dssp HHHHHHHHHHHHHCC-----TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-E-ECHHHHHHHHTST
T ss_pred HHHHHHHHHHhcCcc-----cccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-C-CCHHHHHHHHhcC
Confidence 97 34444443200 001000 1247999999999999999999999999999874 4 999999999986
Q ss_pred cCcEEE-EeeCCCCcccCCCHH---HHHHHHH-HhhhccCCCceEEeecccccccccccCCCc-cc-c----ccCCCCcE
Q 017569 202 NTICVA-AILGSTLTGEFEDVK---LLHDLLT-KKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-D----FRLPLVKS 270 (369)
Q Consensus 202 ~~~~v~-~~~~~~~tG~~~~l~---~I~~l~~-~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~----~~~~~~Ds 270 (369)
++++|+ +++++||||.+.+.+ +|+++|+ ++ ++++|+|++|+...+..-.+.. .. + ......+.
T Consensus 178 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAP------DFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFW 251 (422)
T ss_dssp TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST------TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEE
T ss_pred CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhcc------CCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEE
Confidence 678877 688999999997766 7777777 88 9999999999741110000000 11 1 11234566
Q ss_pred EEEcCccCCCCCCCeEEEEEe
Q 017569 271 INVSGHKYGLVYAGVGWVVWR 291 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~ 291 (369)
+..+++|+++.+.+.|+++++
T Consensus 252 ~~~S~SK~~~~GlriG~~~~~ 272 (422)
T 3d6k_A 252 FMSSTSKITHAGSGVSFFASS 272 (422)
T ss_dssp EEEESTTTSCTTSSCEEEECC
T ss_pred EEcChhhhcCcccceEEEEeC
Confidence 777899996656779999874
No 198
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.69 E-value=3e-15 Score=145.89 Aligned_cols=262 Identities=11% Similarity=-0.045 Sum_probs=155.5
Q ss_pred ChHHHHHHHHHHhccCCCCC-CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
.+|.+.+++.++++...... ..++ .....++++.++++++.+. ..+++|+||++|+..++.+++.... .
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~-----~~v~~~~ggtea~~~ai~~~~~~~~-~-- 129 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFGGIT--HAPAIELCRKLVAMTPQPL-----ECVFLADSGSVAVEVAMKMALQYWQ-A-- 129 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCSSEE--CHHHHHHHHHHHHHSCTTC-----CEEEEESSHHHHHHHHHHHHHHHHH-H--
T ss_pred CCHHHHHHHHHHHHhcccccccccC--CHHHHHHHHHHHHhCCCCC-----CEEEEeCCHHHHHHHHHHHHHHHhc-c--
Confidence 35778888888876533211 1122 2334456677999998654 3489999999999999987653211 0
Q ss_pred hcCCCCCCCeEEecCCCcch-HHHHHhhhc-------------ceeEEEeccC-----CccccCHHHHHHHHhh---cCc
Q 017569 147 EQGKPYDKPNIVTGANVQVC-WEKFARYFE-------------VELKEVKLEE-----GYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s-~~~~~~~~G-------------~~v~~v~~~~-----~~~~~d~~~L~~~i~~---~~~ 204 (369)
.|. .+++|++++++|.. ...++...| .+++.++++. +...+|+++|++++++ +++
T Consensus 130 -~g~--~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 206 (429)
T 1s0a_A 130 -KGE--ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIA 206 (429)
T ss_dssp -HTC--CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEE
T ss_pred -cCC--CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEE
Confidence 111 13578888876543 332332211 1456676642 1136899999999974 455
Q ss_pred EEEEeeC-CCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC
Q 017569 205 CVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (369)
Q Consensus 205 ~v~~~~~-~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l 279 (369)
+|+++.. +|++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++ |++
T Consensus 207 ~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~g~--~g~~~~~~~~~~~~d~~t~s--K~l 276 (429)
T 1s0a_A 207 AVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE------GILLIADEIATGFGR--TGKLFACEHAEIAPDILCLG--KAL 276 (429)
T ss_dssp EEEECSSEECTTTCEEBCTHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC--GGG
T ss_pred EEEEeecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCcc--cchHHHhhhcCCCCCEEEec--ccc
Confidence 6655555 689998766 99999999999 999999999986422 11111112111246777765 877
Q ss_pred CCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 280 LVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 280 ~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+++ .+.|+++.++ +.. +.+... . ........+ .+-+.....++.++++.+..+++.+ +..++.++++++|++
T Consensus 277 ~~G~~~iG~~~~~~-~~~-~~l~~~-~-~~~~~~~~t--~~~n~~~~~a~~aal~~~~~~~~~~-~~~~~~~~l~~~L~~ 349 (429)
T 1s0a_A 277 TGGTMTLSATLTTR-EVA-ETISNG-E-AGCFMHGPT--FMGNPLACAAANASLAILESGDWQQ-QVADIEVQLREQLAP 349 (429)
T ss_dssp GTSSSCCEEEEECH-HHH-HHHHTS-T-TSSCSCCCT--TTTCHHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHHHHGG
T ss_pred cCCCccceEEEeCH-HHH-HHhhcC-C-CcccccCCC--CCCCHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHH
Confidence 777 7899998754 222 222110 0 000000011 1122223344445666554443322 777788999999987
Q ss_pred c
Q 017569 359 S 359 (369)
Q Consensus 359 ~ 359 (369)
+
T Consensus 350 l 350 (429)
T 1s0a_A 350 A 350 (429)
T ss_dssp G
T ss_pred H
Confidence 6
No 199
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.68 E-value=2.6e-15 Score=144.52 Aligned_cols=194 Identities=15% Similarity=-0.012 Sum_probs=132.6
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...+.+.. .......++++++++++|.+ ..++|+||++|+..++.+++..+..
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~---- 119 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLHTSNL--YYNENIAAAAKNLAKASALE-------RVFFTNSGTESIEGAMKTARKYAFN---- 119 (395)
T ss_dssp SCHHHHHHHHHHHTTCSCCCTT--SBCHHHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHHhcCCC-------eEEEeCCHHHHHHHHHHHHHHHhhc----
Confidence 3578888888888654433322 23455667888899998843 3899999999999999988764321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhh-------------cceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYF-------------EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~-------------G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
.| ..+++|++++++|..+...+..+ +.++..+|.+ |+++|++++++++++|++..++++
T Consensus 120 ~g--~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~~~v~~~~~~~~ 191 (395)
T 3nx3_A 120 KG--VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN------DISSVEKLVNEKTCAIILESVQGE 191 (395)
T ss_dssp TT--CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT------CHHHHHTTCCTTEEEEEEESEECT
T ss_pred cC--CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC------CHHHHHHhccCCeEEEEEeCccCC
Confidence 12 12467888777765432222221 2334444432 799999999888889998888899
Q ss_pred cccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 215 TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 215 tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
+|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++ |.++++.+.|+++.
T Consensus 192 ~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~~~g~--~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~ 261 (395)
T 3nx3_A 192 GGINPANKDFYKALRKLCDEK------DILLIADEIQCGMGR--SGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVI 261 (395)
T ss_dssp TSCEECCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEE
T ss_pred CCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCCc--CCcchhHHhcCCCCCEEEec--ccccCCCceEEEEE
Confidence 999877 99999999999 999999999986422 11111111111246777765 77666788999987
Q ss_pred eC
Q 017569 291 RT 292 (369)
Q Consensus 291 ~~ 292 (369)
++
T Consensus 262 ~~ 263 (395)
T 3nx3_A 262 NQ 263 (395)
T ss_dssp CH
T ss_pred ch
Confidence 54
No 200
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.68 E-value=2e-15 Score=146.98 Aligned_cols=250 Identities=11% Similarity=-0.104 Sum_probs=157.9
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++........ ...+...++++++++++|.+ .+++|+||++|+..++.+++..+.. +
T Consensus 74 ~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~g~~-------~v~~~~ggteA~~~al~~~~~~~~~-~-- 141 (420)
T 2pb2_A 74 CHPALVEALKSQGETLWHTSNV--FTNEPALRLGRKLIDATFAE-------RVLFMNSGTEANETAFKLARHYACV-R-- 141 (420)
T ss_dssp TCHHHHHHHHHHHTTCCCCCTT--SCCHHHHHHHHHHHHHSSCS-------EEEEESSHHHHHHHHHHHHHHHHHH-H--
T ss_pred CCHHHHHHHHHHHHhcccccCc--cCCHHHHHHHHHHHhhCCCC-------eEEEeCCHHHHHHHHHHHHHHHhhh-c--
Confidence 4578888888888653321111 23355667778899998854 3899999999999999988763321 1
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHhhhcce------------eEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCC
Q 017569 148 QGKPYDKPNIVTGANVQV-CWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~-s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (369)
|.+ .+++|++++++|. ....++...|.. +..+|. .|+++|++++++++++|+++.++++
T Consensus 142 -~~~-g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~le~~i~~~~~~vi~~p~~~~ 213 (420)
T 2pb2_A 142 -HSP-FKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------NDLHAVKAVMDDHTCAVVVEPIQGE 213 (420)
T ss_dssp -TCT-TCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT------TCHHHHHHHCCTTEEEEEECSEETT
T ss_pred -cCC-CCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC------CCHHHHHHHhccCceEEEEeCCcCC
Confidence 111 1347887776654 444445555543 444443 2799999999988999998888887
Q ss_pred ccc----CCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEE
Q 017569 215 TGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (369)
Q Consensus 215 tG~----~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~ 290 (369)
+|. .+++++|.++|+++ ++++|+|++|.++.. ......++..-...|.+++ +|+++++.+.|++++
T Consensus 214 gG~~~~~~~~l~~l~~l~~~~------gi~lI~Dev~~g~~~--~g~~~~~~~~~~~~diit~--sK~l~~G~~iG~~~~ 283 (420)
T 2pb2_A 214 GGVQAATPEFLKGLRDLCDEH------QALLVFDEVQCGMGR--TGDLFAYMHYGVTPDILTS--AKALGGGFPVSAMLT 283 (420)
T ss_dssp TTSEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE
T ss_pred CCeecCCHHHHHHHHHHHHHc------CCEEEEEcCCcCccc--CCcHHHHHhcCCCCCeEEe--cccccCCCceEEEEE
Confidence 776 36799999999999 999999999975322 1111111111124687764 699887778999998
Q ss_pred eCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+++ .. +.+.. .. ...+. +-+.....++.++|+.+..+.+.+ +..++.+++++.|++.
T Consensus 284 ~~~-l~-~~l~~------~~-~~~t~--~~~~~~~aa~~a~L~~~~~~~~~~-~~~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 284 TQE-IA-SAFHV------GS-HGSTY--GGNPLACAVAGAAFDIINTPEVLQ-GIHTKRQQFVQHLQAI 340 (420)
T ss_dssp CHH-HH-TTCC-----------CCEE--CCCHHHHHHHHHHHHHHSSHHHHH-HHHHHHHHHHHHHHHH
T ss_pred hHH-HH-HhhcC------CC-cCccc--CcCHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHH
Confidence 653 21 22111 00 01111 222233445556666665433222 7788888999988765
No 201
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.68 E-value=2.5e-15 Score=144.20 Aligned_cols=265 Identities=12% Similarity=0.034 Sum_probs=164.4
Q ss_pred CChHHHHHHHHHHhccCC--CCC-----CCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe--EEeCCchHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG--VGTVGSSEAIMLAGLAF 137 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~--~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~--~~t~Ggt~a~~~al~~~ 137 (369)
..++.|.+++.+.+.+-. ++| .......++|.-+.+...++||+++. .|+ +=..+|+.||+.++.++
T Consensus 65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A----~w~VNVQP~SGs~AN~avy~Al 140 (490)
T 3ou5_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPA----QWGVNVQPYSGSPANLAVYTAL 140 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTT----TEEEECCCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCcc----ccCCCCCcCCHHHHHHHHHHHH
Confidence 345778888877664321 111 11224678999999999999999973 232 33458999999999998
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCC---CcchHH-----HHHhhhcc--eeEEEeccCCccccCHHHHHHHHhh-cCcEE
Q 017569 138 KRKWQQKRKEQGKPYDKPNIVTGAN---VQVCWE-----KFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICV 206 (369)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Vi~s~~---~h~s~~-----~~~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v 206 (369)
.++ +++|+..+. .|.+.- ......|. ++...+++++++.+|.+++++...+ +|++|
T Consensus 141 l~P-------------GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklI 207 (490)
T 3ou5_A 141 LQP-------------HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLI 207 (490)
T ss_dssp CC--------------CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEE
T ss_pred cCC-------------CCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeE
Confidence 764 467776544 343322 11222333 2444456766799999999998765 78887
Q ss_pred EEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
++- .+..-..-|++++.++|++. |.++++|.|+-.+.+ ....++.. ++.+|.+|.++||.|.+|.| |
T Consensus 208 i~G--~SaY~r~id~~~~reIAd~v------GA~Lm~DmAHiaGLV--A~g~~psP--~~~ADvVTtTTHKTLrGPrG-G 274 (490)
T 3ou5_A 208 IAG--TSAYARLIDYARMREVCDEV------KAHLLADMAHISGLV--AAKVIPSP--FKHADIVTTTTHKTLRGARS-G 274 (490)
T ss_dssp EEC--CSSCCSCCCHHHHHHHHHHH------TCEEEEECGGGHHHH--HTTSSCCG--GGTCSEEEEESSSTTCSCSC-E
T ss_pred EEC--CccCccccCHHHHHHHHhhc------ccEEEechhhhhhhh--cccccCCc--cccceEEeccccccccCCCc-e
Confidence 743 33334566999999999999 999999999765554 11112222 34699999999999999987 7
Q ss_pred EEEEeCCCCccc-cccccc--CccCCCC--CCccccCCcchhHHHHHHHHHHHhcHhhHHHH--HhhHHHHHHHHHHHhc
Q 017569 287 WVVWRTKDDLPD-ELVFHI--NYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF--CCVDHKKLSSFFVIHS 359 (369)
Q Consensus 287 ~l~~~~~~~~~~-~~~~~~--~y~~~~~--~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~--~~~~~a~~l~~~L~~~ 359 (369)
++++++...... ...... .+....+ --+.++|..-...+++...+++.-....+.+. +..+||+.|++.|.+.
T Consensus 275 ~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~ 354 (490)
T 3ou5_A 275 LIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp EEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 888876311000 000000 0000000 01234456656667777777776444445555 9999999999999999
Q ss_pred CC
Q 017569 360 SY 361 (369)
Q Consensus 360 g~ 361 (369)
||
T Consensus 355 G~ 356 (490)
T 3ou5_A 355 GY 356 (490)
T ss_dssp TC
T ss_pred CC
Confidence 87
No 202
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.66 E-value=6e-15 Score=143.21 Aligned_cols=250 Identities=9% Similarity=-0.093 Sum_probs=151.9
Q ss_pred ChHHHHHHHHHHhccCCCC---CCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (369)
+++.+.+++.++++..... +...++ ..++++.++++++.+. ...+++|+||++|+..++..++...
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~----~~~l~~~la~~~~~~~----~~~v~~~~g~~~a~~~~~~~a~~~~--- 126 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLSHTCFQVLAYEP----YLELCEIMNQKVPGDF----AKKTLLVTTGSEAVENAVKIARAAT--- 126 (426)
T ss_dssp TCHHHHHHHHHHTTTCSCCCTTTEECHH----HHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHhCCCccccccCCHH----HHHHHHHHHHhCCccc----ccEEEEeCchHHHHHHHHHHHHHhh---
Confidence 4577889888888653221 122233 3445556888873221 1248999999999999988543211
Q ss_pred HHhcCCCCCCCeEEecCCCcc-hHHHHHhhhcce-------------eEEEeccC----CccccCHHHHHHHHh-----h
Q 017569 145 RKEQGKPYDKPNIVTGANVQV-CWEKFARYFEVE-------------LKEVKLEE----GYYVMNPVKAVELVD-----E 201 (369)
Q Consensus 145 ~~~~g~~~~~~~Vi~s~~~h~-s~~~~~~~~G~~-------------v~~v~~~~----~~~~~d~~~L~~~i~-----~ 201 (369)
+ +..|++.+++|. .+..++...|.. ++.+|++. .++.+|+++|+++++ +
T Consensus 127 ----~----~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (426)
T 1sff_A 127 ----K----RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPE 198 (426)
T ss_dssp ----T----CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGG
T ss_pred ----C----CCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCC
Confidence 0 236777776654 444555555543 67787753 125689999999997 4
Q ss_pred cCcEEEEee-CCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCc
Q 017569 202 NTICVAAIL-GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (369)
Q Consensus 202 ~~~~v~~~~-~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~h 276 (369)
++++|+++. ++| ||.+.+ +++|.++|+++ ++++|+|++|+++.. ..+....+..-..+|.++ .+
T Consensus 199 ~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~~~di~s--~s 267 (426)
T 1sff_A 199 DIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEH------GIMLIADEVQSGAGR--TGTLFAMEQMGVAPDLTT--FA 267 (426)
T ss_dssp GEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGTTSCCSEEE--EC
T ss_pred ceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHc------CCEEEEechhhccCc--ccchhhhhhcCCCCCEEE--Ec
Confidence 566776643 455 997767 99999999999 999999999996422 111111121112467665 56
Q ss_pred cCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHH
Q 017569 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFV 356 (369)
Q Consensus 277 K~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L 356 (369)
|+++++.++|+++++++ .. ..+.. ... ..+ .+-+.....++.++|+.+..+.+.+ +..++.++++++|
T Consensus 268 K~~~~GlriG~~~~~~~-~~-~~l~~-~~~------~~~--~~~~~~~~~a~~aal~~~~~~~~~~-~~~~~~~~l~~~l 335 (426)
T 1sff_A 268 KSIAGGFPLAGVTGRAE-VM-DAVAP-GGL------GGT--YAGNPIACVAALEVLKVFEQENLLQ-KANDLGQKLKDGL 335 (426)
T ss_dssp GGGGTSSCCEEEEEEHH-HH-TTSCT-TSB------CCS--SSSCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEcHH-HH-hhhcc-CCc------CcC--CCCCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHH
Confidence 99876556799998652 21 12110 000 011 1222333455556666665443322 7778888888888
Q ss_pred Hhc
Q 017569 357 IHS 359 (369)
Q Consensus 357 ~~~ 359 (369)
++.
T Consensus 336 ~~~ 338 (426)
T 1sff_A 336 LAI 338 (426)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 203
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.66 E-value=7.8e-15 Score=142.93 Aligned_cols=202 Identities=10% Similarity=-0.041 Sum_probs=127.3
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+.++.... +.......+...+++++++++++.+. ..+++|+||++|+..++.+++..+.. .
T Consensus 47 ~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~ea~~~al~~~~~~~~~----~ 116 (430)
T 3i4j_A 47 RAEVGERMAAQAARLPF-VHGSQFSSDVLEEYAGRLARFVGLPT-----FRFWAVSGGSEATESAVKLARQYHVE----R 116 (430)
T ss_dssp CHHHHHHHHHHHHHCCC-CCTTTCEEHHHHHHHHHHHHHTTCTT-----CEEEEESSHHHHHHHHHHHHHHHHHH----T
T ss_pred CHHHHHHHHHHHHhccc-ccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHHHHHHHHHHHHHHHHh----c
Confidence 57788888877765322 22223345566788889999998765 25899999999999999998765332 2
Q ss_pred CCCCCCCeEEecCCCcchHHHHHhhhcc---------------eeEEEeccCC--ccccCHHHHHHHHh----hcCcEEE
Q 017569 149 GKPYDKPNIVTGANVQVCWEKFARYFEV---------------ELKEVKLEEG--YYVMNPVKAVELVD----ENTICVA 207 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s~~~~~~~~G~---------------~v~~v~~~~~--~~~~d~~~L~~~i~----~~~~~v~ 207 (369)
|. ..+++|++.+++|..+...+..++. ++..+|.+.. .+..|+++|+++++ +++++|+
T Consensus 117 g~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi 195 (430)
T 3i4j_A 117 GE-PGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFM 195 (430)
T ss_dssp TC-TTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEE
T ss_pred CC-CCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 1246888888877665544433332 3444554321 13457899999997 4456666
Q ss_pred EeeCCC-CcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccccc-CCCCcEEEEcCccCCCC
Q 017569 208 AILGST-LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV 281 (369)
Q Consensus 208 ~~~~~~-~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Dsi~~~~hK~l~~ 281 (369)
++..++ ++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......... -...|.++++ |.+.+
T Consensus 196 ~~p~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~~~~~--~g~~~~~~~~~~~~~di~t~s--K~l~~ 265 (430)
T 3i4j_A 196 AEPVVGASDAALAPAPGYYERVRDICDEA------GIIFIADEVMSGMGR--CGSPLALSRWSGVTPDIAVLG--KGLAA 265 (430)
T ss_dssp ECSSCCGGGTTCCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGTTTCCCSEEEEC--GGGTT
T ss_pred EcCcccCcCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccchhhhhhhcCCCCcEEEEc--ccccC
Confidence 666666 8888766 99999999999 999999999986432 1111111111 1135677754 88876
Q ss_pred C-CCeEEEEEe
Q 017569 282 Y-AGVGWVVWR 291 (369)
Q Consensus 282 p-~g~g~l~~~ 291 (369)
+ ++.|+++.+
T Consensus 266 G~~r~G~~~~~ 276 (430)
T 3i4j_A 266 GYAPLAGLLAA 276 (430)
T ss_dssp TSSCCEEEEEC
T ss_pred CccccEEEEEC
Confidence 6 778998874
No 204
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.65 E-value=1.8e-14 Score=140.94 Aligned_cols=252 Identities=10% Similarity=-0.126 Sum_probs=148.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++........+ ..+...++++.+++++|.+. +++++||++|+..++.+++..... .
T Consensus 82 ~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~-------v~~~~sGseA~~~al~~a~~~~~~---~ 149 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLTICSRAF--FSVPLGICERYLTNLLGYDK-------VLMMNTGAEANETAYKLCRKWGYE---V 149 (433)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTS--EEHHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhCCCccCCc--CCHHHHHHHHHHHhhcCCCe-------EEEeCCHHHHHHHHHHHHHHHhhh---c
Confidence 56888899888886543211112 33445566677888887543 899999999999999987642110 0
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHhhhc------------ceeEEEeccCCccccCHHHHHHHH-hhcCcEEEEeeCCC
Q 017569 148 QGKPYDKPNIVTGANVQVC-WEKFARYFE------------VELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGST 213 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s-~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i-~~~~~~v~~~~~~~ 213 (369)
.|....+++|++++++|.. ...++...| .++..+|. .|+++|++++ ++++++|+++..++
T Consensus 150 ~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~------~d~~~le~~l~~~~~~~vi~ep~~~ 223 (433)
T 1z7d_A 150 KKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY------DDLEALEEELKDPNVCAFIVEPIQG 223 (433)
T ss_dssp SCCCTTCCEEEEETTC--------------------------CEEEECT------TCHHHHHHHHTSTTEEEEEECSSBS
T ss_pred cCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC------CCHHHHHHHhCCCCEEEEEEECCCC
Confidence 1111113678888776544 344444434 23444443 2899999999 56777777776667
Q ss_pred CcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEE
Q 017569 214 LTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (369)
Q Consensus 214 ~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l 288 (369)
++|.+. ++++|.++|+++ ++++|+|++|.++.. ......++..-...|.++ ..|+++++ .+.|++
T Consensus 224 ~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~g~--~g~~~~~~~~~~~~di~t--~sK~l~~G~~~~G~v 293 (433)
T 1z7d_A 224 EAGVIVPSDNYLQGVYDICKKY------NVLFVADEVQTGLGR--TGKLLCVHHYNVKPDVIL--LGKALSGGHYPISAV 293 (433)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEEE
T ss_pred CCCccCCCHHHHHHHHHHHHHc------CCEEEEecCccCCCc--CCcchhhHhcCCCCCEEE--ECccccCCCCCeEEE
Confidence 789764 799999999999 999999999976322 111111111112467775 45988766 568999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+.+++ .. +.+.. .. ...+. +-+....+++.++|+.+..+++.+ +..++.++++++|++.
T Consensus 294 ~~~~~-~~-~~l~~--~~-----~~~t~--~~~~~~~aaa~aal~~~~~~~~~~-~~~~~~~~l~~~L~~l 352 (433)
T 1z7d_A 294 LANDD-IM-LVIKP--GE-----HGSTY--GGNPLAASICVEALNVLINEKLCE-NAEKLGGPFLENLKRE 352 (433)
T ss_dssp EECHH-HH-TTCCT--TC-----CCCTT--TTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHH
T ss_pred EECHH-HH-hhhcc--cc-----ccccC--CCCHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHH
Confidence 88642 21 12110 00 01111 112223344456666665443322 7788899999999875
No 205
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.65 E-value=1.6e-14 Score=140.41 Aligned_cols=245 Identities=10% Similarity=-0.131 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
+|.+.+++.++++.... +...........++++.+++++|.+ + ..+++|+||++|+..++.+++..
T Consensus 61 ~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~-----~~v~~~~gg~ea~~~ai~~~~~~------- 127 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAH-AAANDFYNIPQLELAKKLVTYSPGNFQ-----KKVFFSNSGTEAIEASIKVVKNT------- 127 (419)
T ss_dssp CHHHHHHHHHHHTTSCC-CSCSCSCCHHHHHHHHHHHHHSSCSSC-----EEEEEESSHHHHHHHHHHHHHTT-------
T ss_pred CHHHHHHHHHHHhhCcc-ccccccCCHHHHHHHHHHHHhCCCCcC-----CEEEEeCchHHHHHHHHHHHHHh-------
Confidence 58888998888865422 1111122344556777899999986 3 24899999999999999886541
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHhhh-------------cceeEEEeccCCccc----------------cCHHHHH-
Q 017569 148 QGKPYDKPNIVTGANVQV-CWEKFARYF-------------EVELKEVKLEEGYYV----------------MNPVKAV- 196 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~-s~~~~~~~~-------------G~~v~~v~~~~~~~~----------------~d~~~L~- 196 (369)
. +++|+++++++. .+..++... +.+++.+|.+.+ ++ +|+++|+
T Consensus 128 ---~--~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~g~~~~~~~~~~~~~~~~~l~~ 201 (419)
T 2eo5_A 128 ---G--RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNP-YRNPWHINGYENPSELVNRVIEFIED 201 (419)
T ss_dssp ---S--CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCS-SSCTTCCCTTTCHHHHHHHHHHHHHH
T ss_pred ---h--CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcc-ccccccccccccchhhHHHHHHHHHH
Confidence 1 367888877654 333333221 135778887542 33 5789999
Q ss_pred HHHhh-----cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCC
Q 017569 197 ELVDE-----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL 267 (369)
Q Consensus 197 ~~i~~-----~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 267 (369)
+++++ ++++|+++..++++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-..
T Consensus 202 ~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~------~~~li~DE~~~~~g~--~g~~~~~~~~~~~ 273 (419)
T 2eo5_A 202 YIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKY------GILLVDDEVQMGLGR--TGKLFAIENFNTV 273 (419)
T ss_dssp THHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTCC
T ss_pred HHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CcchhhHHhcCCC
Confidence 98873 5556665544567897655 99999999999 999999999986432 1111111211124
Q ss_pred CcEEEEcCccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHH-Hh
Q 017569 268 VKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSF-CC 345 (369)
Q Consensus 268 ~Dsi~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~-~~ 345 (369)
.|.++++ |.++++ .+.|+++.+++ .. .+ . ... ..+ .+-+.....++.++|+.+. + .. +.
T Consensus 274 ~d~~t~s--K~~~~G~~riG~~~~~~~-~~--~~-~--~~~-----~~t--~~~n~~~~~aa~aal~~~~-~---~~~~~ 334 (419)
T 2eo5_A 274 PDVITLA--KALGGGIMPIGATIFRKD-LD--FK-P--GMH-----SNT--FGGNALACAIGSKVIDIVK-D---LLPHV 334 (419)
T ss_dssp CSEEEEC--GGGGTTTSCCEEEEEEGG-GC--CC--------------C--CCCCHHHHHHHHHHHHHHH-H---HHHHH
T ss_pred CCEEEec--ccccCCccceEEEEEchH-hh--cC-C--ccc-----CCC--CCCCHHHHHHHHHHHHHHH-H---HHHHH
Confidence 5777644 777667 88999998653 22 22 1 000 111 1112222333334444432 2 23 78
Q ss_pred hHHHHHHHHHHHhc
Q 017569 346 VDHKKLSSFFVIHS 359 (369)
Q Consensus 346 ~~~a~~l~~~L~~~ 359 (369)
.++.++|.+.|++.
T Consensus 335 ~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 335 NEIGKIFAEELQGL 348 (419)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHh
Confidence 88899999999875
No 206
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.65 E-value=1.7e-14 Score=141.43 Aligned_cols=264 Identities=12% Similarity=-0.011 Sum_probs=155.3
Q ss_pred hHHHHHHHHHHhccCCCCCCCC-cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 69 EPECDKLVMASINKNYVDMDEY-PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~-~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
++.+.+++.+.+.... +..+ ....++..++++.++++++.+. ..+++|+||++|+..++.+++..+..
T Consensus 68 ~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~ggsea~~~al~~~~~~~~~---- 136 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD--YSPGFQYGHPLSFQLAEKITDLTPGNL-----NHVFFTDSGSECALTAVKMVRAYWRL---- 136 (449)
T ss_dssp CHHHHHHHHHHTTTCS--CCCSSSCCCHHHHHHHHHHHTTSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHHHHHHHHHHHHHHHHh----
Confidence 5788999888886532 1111 2333455677778888887653 24899999999999999988653211
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHhhhc------------ceeEEEeccCCccc-----cC--------HHHHHHHHh-
Q 017569 148 QGKPYDKPNIVTGANVQV-CWEKFARYFE------------VELKEVKLEEGYYV-----MN--------PVKAVELVD- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~-s~~~~~~~~G------------~~v~~v~~~~~~~~-----~d--------~~~L~~~i~- 200 (369)
.|.+ .+++|++.+++|. ....++...| .+++.++++.. +. +| +++|+++++
T Consensus 137 ~g~~-~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~d~~~~~~~~~~~le~~l~~ 214 (449)
T 3a8u_X 137 KGQA-TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLL-ASNAYSRGMPKEGGIALADELLKLIEL 214 (449)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCC-GGGTTCSSSCSSSHHHHHHHHHHHHHH
T ss_pred cCCC-CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCcc-ccCccccCChHHHHHHHHHHHHHHHHh
Confidence 1111 1357877666554 3344444433 13556665321 22 46 999999997
Q ss_pred ---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEE
Q 017569 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (369)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~ 273 (369)
+++++|+++..++++|.+.| +++|.++|+++ ++++|+|++|.++.. .......+..-...|.+++
T Consensus 215 ~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~~~g~--~g~~~~~~~~~~~~di~s~ 286 (449)
T 3a8u_X 215 HDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH------NILLVFDEVITGFGR--TGSMFGADSFGVTPDLMCI 286 (449)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEE
T ss_pred cCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh------CCEEEEeccccCccc--cCcchhhhhcCCCCCEEEE
Confidence 45666666655577998877 99999999999 999999999965322 1110111111123577754
Q ss_pred cCccCCCCC-CCeEEEEEeCCCCcccccccccC--ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 274 SGHKYGLVY-AGVGWVVWRTKDDLPDELVFHIN--YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 274 ~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~--y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
.|+++++ ...|++++++ +.. +.+..... .........+ .+-+.....++.++|+.+..+++.+ +..++.+
T Consensus 287 --sK~l~~G~~~~G~~~~~~-~~~-~~l~~~~~~~~~~~~~~~~t--~~~~~~~~aa~~aal~~~~~~~~~~-~~~~~~~ 359 (449)
T 3a8u_X 287 --AKQVTNGAIPMGAVIAST-EIY-QTFMNQPTPEYAVEFPHGYT--YSAHPVACAAGLAALCLLQKENLVQ-SVAEVAP 359 (449)
T ss_dssp --CGGGGTTSSCCEEEEEEH-HHH-HHHHTCSSCTTSCSSCCCCT--TTTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHH
T ss_pred --cccccCCCCceEEEEECH-HHH-HHhhccCcccccccccccCC--CcccHHHHHHHHHHHHHHHhcCHHH-HHHHHHH
Confidence 4887654 4588888864 222 22211100 0000000011 1112222344445566554443322 7888899
Q ss_pred HHHHHHHhcC
Q 017569 351 LSSFFVIHSS 360 (369)
Q Consensus 351 ~l~~~L~~~g 360 (369)
+++++|++++
T Consensus 360 ~l~~~L~~l~ 369 (449)
T 3a8u_X 360 HFEKALHGIK 369 (449)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 207
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.64 E-value=1.3e-14 Score=142.10 Aligned_cols=253 Identities=11% Similarity=-0.068 Sum_probs=154.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++........+ ..+...++.+++++++|.+ .+++++||++|+..++.+++..... .
T Consensus 93 ~~p~v~~Ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~sGseA~~~al~~~~~~~~~---~ 160 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLTLTSRAF--YNNVLGEYEEYITKLFNYH-------KVLPMNTGVEAGETACKLARKWGYT---V 160 (439)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTS--EESSHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhcCcccCcc--CCHHHHHHHHHHHHhcCCC-------EEEEeCCHHHHHHHHHHHHHHHhhh---c
Confidence 56888899888886543211111 1223345556678877754 3899999999999999988642110 0
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHhhhc------------ceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCC
Q 017569 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFE------------VELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGST 213 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h-~s~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (369)
.|....+++|++++++| .++..++...| .++..+|.+ |+++|+++++ +++++|+++..++
T Consensus 161 ~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~------d~~~le~~l~~~~~~~vi~ep~~~ 234 (439)
T 2oat_A 161 KGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN------DLPALERALQDPNVAAFMVEPIQG 234 (439)
T ss_dssp TCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS------CHHHHHHHTTSTTEEEEEECSSBT
T ss_pred cCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC------CHHHHHHHhCCCCEEEEEEECCCC
Confidence 11111135777777654 44455555544 345555542 7999999994 6677777766666
Q ss_pred CcccCC----CHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEE
Q 017569 214 LTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (369)
Q Consensus 214 ~tG~~~----~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l 288 (369)
++|.+. ++++|.++|+++ |+++|+|++|.++.. ......++..-...|.++ ..|+++++ .+.|++
T Consensus 235 ~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~~g~g~--~g~~~~~~~~~~~~Di~t--~sK~l~~G~~~~G~v 304 (439)
T 2oat_A 235 EAGVVVPDPGYLMGVRELCTRH------QVLFIADEIQTGLAR--TGRWLAVDYENVRPDIVL--LGKALSGGLYPVSAV 304 (439)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEEE
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CCcchhHHHhCCCCcEEE--ecccccCCCCCeEEE
Confidence 788765 799999999999 999999999975322 111111111112467765 56988766 568999
Q ss_pred EEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
+++++ .. +.+.. .. ...+. +-+.....++.++|+.+..+++.+ +..++.++++++|++++
T Consensus 305 ~~~~~-~~-~~l~~------~~-~~~t~--~~~~~~~aaa~aal~~~~~~~~~~-~~~~~~~~l~~~L~~l~ 364 (439)
T 2oat_A 305 LCDDD-IM-LTIKP------GE-HGSTY--GGNPLGCRVAIAALEVLEEENLAE-NADKLGIILRNELMKLP 364 (439)
T ss_dssp EECHH-HH-TTSCT------TS-SCCSS--TTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHTTSC
T ss_pred EECHH-HH-hccCC------CC-cccCC--CcCHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHhc
Confidence 88642 21 22110 00 01111 112223445556666665543322 78889999999998875
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.64 E-value=3e-14 Score=139.78 Aligned_cols=201 Identities=10% Similarity=-0.058 Sum_probs=131.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...+ .......+...+++++++++++.+. . +++|+||++|+..++.+++..+..
T Consensus 66 ~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~~-----~-v~~~~ggseA~~~al~~~~~~~~~---- 133 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGEY-----V-IFFSNSGSEANETAFKIARQYYAQ---- 133 (452)
T ss_dssp CCHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSCE-----E-EEEESSHHHHHHHHHHHHHHHHHT----
T ss_pred CCHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCCc-----e-EEEeCchHHHHHHHHHHHHHHHHh----
Confidence 358889998888865433 1223445667788889999998764 2 899999999999999998754211
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcc-------------eeEEEeccCC-c----------cccCHHHHHHHHh---
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEG-Y----------YVMNPVKAVELVD--- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~-~----------~~~d~~~L~~~i~--- 200 (369)
.|.+ .+++|++.+++|..+...+..++. ++..++.... . ...++++|+++++
T Consensus 134 ~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 134 KGEP-HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred cCCC-CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 1111 246788877776543332222221 2444543210 0 1112899999998
Q ss_pred -hcCcEEEEeeC-CCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 201 -ENTICVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 201 -~~~~~v~~~~~-~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+++++|+++.+ +| +|.+.| +++|.++|+++ |+++|+|++|.++.. .......+..-...|.++++
T Consensus 213 ~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~g~--~g~~~~~~~~~~~~di~t~s 283 (452)
T 3n5m_A 213 SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH------GALLISDEVICGFGR--TGKAFGFMNYDVKPDIITMA 283 (452)
T ss_dssp GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGTTCCCSEEEEC
T ss_pred CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc------CCEEEEecchhCCCc--ccccchhhhcCCCCCEEeec
Confidence 45677777777 78 998766 99999999999 999999999886432 11111111111246777754
Q ss_pred CccCCCCC-CCeEEEEEeC
Q 017569 275 GHKYGLVY-AGVGWVVWRT 292 (369)
Q Consensus 275 ~hK~l~~p-~g~g~l~~~~ 292 (369)
|.+.++ ++.|+++.++
T Consensus 284 --K~l~~G~~~ig~~~~~~ 300 (452)
T 3n5m_A 284 --KGITSAYLPLSATAVKR 300 (452)
T ss_dssp --GGGGTTSSCCEEEEEEH
T ss_pred --ccccCCCcceEEEEECH
Confidence 777666 7889998754
No 209
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.63 E-value=2.2e-14 Score=140.06 Aligned_cols=198 Identities=9% Similarity=-0.138 Sum_probs=130.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++... .+....+..++..+++++++++++...+ ...++|+||++|+..++.+++...
T Consensus 60 ~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~ggsea~~~al~~~~~~~------ 128 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPA-GATILSASNAPAVTLAERLLASFPGEGT----HKIWFGHSGSDANEAAYRAIVKAT------ 128 (439)
T ss_dssp SCHHHHHHHHHHHHSCS-CSCSSSSEEHHHHHHHHHHHHTTTCTTT----EEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCHHHHHHHHHHHHHHHh------
Confidence 45788888888876542 2222334556777888999999865431 248999999999999999875421
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHhhhccee--------------EEEeccCCcccc-----CHHHHHHHH----hhcC
Q 017569 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEVEL--------------KEVKLEEGYYVM-----NPVKAVELV----DENT 203 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~-h~s~~~~~~~~G~~v--------------~~v~~~~~~~~~-----d~~~L~~~i----~~~~ 203 (369)
.++.|++.++. |..+..++...|... ..+|.+.+ +.- |+++|++++ .+++
T Consensus 129 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~ 202 (439)
T 3dxv_A 129 -----GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY-RNDPTGDAILTLLTEKLAAVPAGSI 202 (439)
T ss_dssp -----SCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB-TTBTTSHHHHHHHHHHHHTSCTTCE
T ss_pred -----CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc-cccccHHHHHHHHHHHHHhcCCCCE
Confidence 13456655554 455555544444322 23333321 122 799999999 4567
Q ss_pred cEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCC
Q 017569 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (369)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l 279 (369)
++|+++.+++++|.+.+ +++|.++|+++ ++++|+|++|+++.. .......+..-...|.++ ..|.+
T Consensus 203 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DE~~~g~g~--~g~~~~~~~~~~~~di~s--~sK~~ 272 (439)
T 3dxv_A 203 GAAFIEPIQSDGGLIVPPDGFLRKFADICRAH------GILVVCDEVKVGLAR--SGRLHCFEHEGFVPDILV--LGKGL 272 (439)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTCTTT--TSSSSGGGGTTCCCSEEE--ECGGG
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhcCCCCCEEE--Ecchh
Confidence 88888888889999877 99999999999 999999999986322 111011121112467665 45888
Q ss_pred CCCCCeEEEEEeC
Q 017569 280 LVYAGVGWVVWRT 292 (369)
Q Consensus 280 ~~p~g~g~l~~~~ 292 (369)
+++++.|+++.++
T Consensus 273 ~~G~riG~~~~~~ 285 (439)
T 3dxv_A 273 GGGLPLSAVIAPA 285 (439)
T ss_dssp GTTSCCEEEEEEH
T ss_pred cCCcceEEEEECH
Confidence 7767789998754
No 210
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.62 E-value=4.5e-14 Score=137.39 Aligned_cols=245 Identities=12% Similarity=-0.046 Sum_probs=148.2
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.... +. + ......+++++++++++ +. ..+++++||++|+..++..++..
T Consensus 69 ~~p~v~~a~~~~~~~~~~-~~-~--~~~~~~~la~~l~~~~~-~~-----~~v~~~~ggsea~~~al~~a~~~------- 131 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTS-FG-A--PCALENVLAEMVNDAVP-SI-----EMVRFVNSGTEACMAVLRIMRAY------- 131 (427)
T ss_dssp TCHHHHHHHHHHHTTCSC-CS-S--CCHHHHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHH-------
T ss_pred CCHHHHHHHHHHHHhCCC-cC-C--CCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHh-------
Confidence 368888998888865432 11 1 34566678888999987 33 24899999999999999876542
Q ss_pred cCCCCCCCeEEecCCCcchHH-HHHhhhcce-------------------eEEEeccCCccccCHHHHHHHHhh---cCc
Q 017569 148 QGKPYDKPNIVTGANVQVCWE-KFARYFEVE-------------------LKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~-~~~~~~G~~-------------------v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (369)
.| +.+|++.+++|+.+. .+....|.. +..+|.+ |+++|++++++ +++
T Consensus 132 ~~----~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~~ 201 (427)
T 3fq8_A 132 TG----RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN------DLEAVKALFAENPGEIA 201 (427)
T ss_dssp HC----CCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT------CHHHHHHHHHHSTTTEE
T ss_pred hC----CCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC------CHHHHHHHHHhCCCCEE
Confidence 11 356777665554322 222221211 2222221 89999999987 567
Q ss_pred EEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|+++..++++|.+.+ +++|.++|+++ ++++|+|++|+++ . .......+..-...|.++++ |.++
T Consensus 202 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~ 270 (427)
T 3fq8_A 202 GVILEPIVGNSGFIVPDAGFLEGLREITLEH------DALLVFDEVITGF-R--IAYGGVQEKFGVTPDLTTLG--KIIG 270 (427)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTBT-T--TBTTHHHHHTTCCCSEEEEC--GGGG
T ss_pred EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecccccc-c--cCcchhhHhcCCCCChhhhh--hhhh
Confidence 8888888888898888 99999999999 9999999999865 2 11111111111235777665 8887
Q ss_pred CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
++++.|+++.++ +.. +.+.....+.. ..+ .+-+.....+..++++.+..+++.+ +..++.++++++|++.
T Consensus 271 ~G~~~G~~~~~~-~~~-~~~~~~~~~~~----~~t--~~~~~~~~aa~~aal~~~~~~~~~~-~~~~~~~~~~~~l~~~ 340 (427)
T 3fq8_A 271 GGLPVGAYGGKR-EIM-QLVAPAGPMYQ----AGT--LSGNPLAMTAGIKTLELLRQPGTYE-YLDQITKRLSDGLLAI 340 (427)
T ss_dssp TTSSCEEEEECH-HHH-TTBTTTSSBCC----CCT--TTTCHHHHHHHHHHHHHHTSTTHHH-HHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEcH-HHH-HhhccCCCccc----cCC--CCcCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHH
Confidence 767789987743 222 22211000000 001 1112222334445555554444432 6667777777777653
No 211
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.62 E-value=5.4e-15 Score=143.85 Aligned_cols=233 Identities=14% Similarity=0.082 Sum_probs=155.7
Q ss_pred HHHHHHHHhhhhcCCCCcccccccc------CCChHHHHHHHHHHhccCCC-CCCCCcchHHHHHHHHHHHHHHhCCCCC
Q 017569 41 AAYQVINDELMLDGNPRLNLASFVT------TWMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVA 113 (369)
Q Consensus 41 ~i~~~l~~~~~~~~~p~~~l~~~~~------~~~~~~v~~~~~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~ 113 (369)
.|+.. .+.+..+.+|.+||+.++. ++..+.|+++...+++.+.. .|....|..+|++++.+++ +|-...
T Consensus 31 ~i~~l-~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~ 106 (420)
T 4h51_A 31 VIFDL-AKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVE 106 (420)
T ss_dssp HHHHH-HHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---C
T ss_pred hHHHH-HHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCcc
Confidence 34443 3345566778888876642 12337788887777765543 4677789999999976654 343321
Q ss_pred CCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcce-eEEEec-cCCccccC
Q 017569 114 DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKL-EEGYYVMN 191 (369)
Q Consensus 114 ~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~-v~~v~~-~~~~~~~d 191 (369)
. .....+-|.|||.|+..++..+...+ ...+++|++|+|+|..+...++..|+. +...+. +++++.+|
T Consensus 107 ~-~~~~~~qt~ggtga~~~a~~~l~~~~---------~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d 176 (420)
T 4h51_A 107 L-ENLVAVQTLSGTGAVSLGAKLLTRVF---------DAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLN 176 (420)
T ss_dssp G-GGEEEEEEEHHHHHHHHHHHHHTTTS---------CTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEEC
T ss_pred c-cccceeeecCchHHHHHHHHHHHHhc---------CCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCC
Confidence 1 11234568899999988877764321 112468999999999999999999997 444444 34557899
Q ss_pred HHHHHHHHhh---cCcEEEEeeCCCCcccC---CCHHHHHHHHHHhhhccCCCceEEeecccccccccccC-CCccc-cc
Q 017569 192 PVKAVELVDE---NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEW-DF 263 (369)
Q Consensus 192 ~~~L~~~i~~---~~~~v~~~~~~~~tG~~---~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~-~~ 263 (369)
.+.+.+.+.. ++++++.+.|+||||.. +.+++|+++|+++ +++++.|.+|.++...-.. +.... .+
T Consensus 177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~------~~~~~~D~~Y~~~~~~~~~~~~~~~~~~ 250 (420)
T 4h51_A 177 FEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK------HHQVFFDSAYQGYASGSLDTDAYAARLF 250 (420)
T ss_dssp HHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc------CceEeeehhhhhhccCCcccchHHHHhH
Confidence 9999888753 56788889999999998 5688999999999 9999999999886541000 00000 01
Q ss_pred cCCCCcE-EEEcCcc-CCCCCCCeEEEEEeCC
Q 017569 264 RLPLVKS-INVSGHK-YGLVYAGVGWVVWRTK 293 (369)
Q Consensus 264 ~~~~~Ds-i~~~~hK-~l~~p~g~g~l~~~~~ 293 (369)
...+... ++.+.-| +++..+.+|++++..+
T Consensus 251 ~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 251 ARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp HHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred HhhCceEEEEeccccccccccCceEEEEeccc
Confidence 0111222 3345667 5667899999987654
No 212
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.62 E-value=1.6e-15 Score=152.69 Aligned_cols=216 Identities=12% Similarity=0.035 Sum_probs=145.3
Q ss_pred ccccccccCCChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHH-HHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHH
Q 017569 58 LNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCV-NMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (369)
Q Consensus 58 ~~l~~~~~~~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~-~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (369)
++|+.+.+..+++.+.+.+.+.+.. ..|....+..++.+++. .++.+.++..........+++|+|+++++.+++.+
T Consensus 107 i~l~~g~~~~~~~~~~~al~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 107 LSYVRDQLGLDPAAFLHEMVDGILG--CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hecccCCCCCCChHHHHHHHHhhhc--CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 3444455555556555555555532 23444445666666644 45566554321000113589999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhh--cceeEEEeccCC-ccccCHHHHHHHHhhcCcEEEEeeCCC
Q 017569 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF--EVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGST 213 (369)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~--G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (369)
+..+. .-..++.|++++++|+.+..++.+. |++++.+|++++ ++.+|+++|++++++++++|++++|+|
T Consensus 185 l~~~~--------l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~N 256 (546)
T 2zy4_A 185 LKLNG--------LLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSN 256 (546)
T ss_dssp HHHTT--------SSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCS
T ss_pred hhhhh--------cCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCC
Confidence 42110 0012468999999999999886654 577888888653 478999999998888899999999999
Q ss_pred CcccCCC---HHHHHHHH--HHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-CCCCeEE
Q 017569 214 LTGEFED---VKLLHDLL--TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGW 287 (369)
Q Consensus 214 ~tG~~~~---l~~I~~l~--~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~p~g~g~ 287 (369)
|||.+.+ +++|.++| +++ ++++++|++|+.+... +...... ....+.+..+.+|+++ .++.+|+
T Consensus 257 PtG~~~~~~~l~~l~~~a~~~~~------~~~ii~De~y~~~~~~---~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~ 326 (546)
T 2zy4_A 257 PPSVKMDQRSLERVRNIVAEHRP------DLMILTDDVYGTFADD---FQSLFAI-CPENTLLVYSFSKYFGATGWRLGV 326 (546)
T ss_dssp SSCBCCCHHHHHHHHHHHHHTCT------TCEEEEECTTGGGSTT---CCCHHHH-CGGGEEEEEESTTTTTCGGGCEEE
T ss_pred CCCccCCHHHHHHHHHHHHhccC------CcEEEEeCcchhhccc---CcCHHHh-CCCCEEEEEeCccccCCCCcceEE
Confidence 9999865 66678888 678 9999999999975431 1000111 1234567778999985 4567899
Q ss_pred EEEeCC
Q 017569 288 VVWRTK 293 (369)
Q Consensus 288 l~~~~~ 293 (369)
++..+.
T Consensus 327 ~~~~~~ 332 (546)
T 2zy4_A 327 VAAHQQ 332 (546)
T ss_dssp EEEESS
T ss_pred EEECCH
Confidence 998764
No 213
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.61 E-value=4.9e-14 Score=137.42 Aligned_cols=249 Identities=10% Similarity=-0.027 Sum_probs=142.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++......... ....+++++++++++ +. ..+++++||++|+..++.+++...
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~~----~~~~~l~~~la~~~~-~~-----~~v~~~~sGsea~~~ai~~a~~~~------ 135 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTPT----ALEVKFAKMLKEAMP-AL-----DKVRFVNSGTEAVMTTIRVARAYT------ 135 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSCC----HHHHHHHHHHHHHCT-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCcCCCCCC----HHHHHHHHHHHHhCC-CC-----CEEEEeCchHHHHHHHHHHHHHhh------
Confidence 35788888888776532211122 233455666888876 32 248999999999999999886531
Q ss_pred cCCCCCCCeEEecCCCcchHHHH-HhhhcceeEEEeccCCccc-------------cCHHHHHHHHh---hcCcEEEEee
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKF-ARYFEVELKEVKLEEGYYV-------------MNPVKAVELVD---ENTICVAAIL 210 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~-~~~~G~~v~~v~~~~~~~~-------------~d~~~L~~~i~---~~~~~v~~~~ 210 (369)
.+++|++.+++|..+... +...|..+..+......+. -|+++|+++++ +++++|+++.
T Consensus 136 -----~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 210 (434)
T 3l44_A 136 -----GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEP 210 (434)
T ss_dssp -----CCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred -----CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcC
Confidence 145788877766543332 2222322111111000011 18999999997 3566777777
Q ss_pred CCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 211 ~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
.++++|.+.+ +++|.++|+++ ++++|+|++|.++ . .......+..-...|.++++ |.++++++.|
T Consensus 211 ~~~~~G~~~~~~~~l~~l~~l~~~~------~illI~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG 279 (434)
T 3l44_A 211 IVGNFGIVEPKPGFLEKVNELVHEA------GALVIYDEVITAF-R--FMYGGAQDLLGVTPDLTALG--KVIGGGLPIG 279 (434)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHTT------TCEEEEECTTTTT-T--SSSSCHHHHHTCCCSEEEEE--GGGGTTSSCE
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccce-e--ccccHHHHHcCCCCCeeehh--hhhcCCcCee
Confidence 7777777776 99999999999 9999999999875 2 11111111111235666654 7777788999
Q ss_pred EEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 287 WVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
+++.++ +.. +.+.... .+.++ . .+-+....++..++|+.+..+.+.+ +..++.+++++.|++
T Consensus 280 ~~~~~~-~i~-~~~~~~~~~~~~~---t----~~~~~~a~aaa~aal~~~~~~~~~~-~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 280 AYGGKK-EIM-EQVAPLGPAYQAG---T----MAGNPASMASGIACLEVLQQEGLYE-KLDELGATLEKGILE 342 (434)
T ss_dssp EEEECH-HHH-TTBTTTSSBCCCC---T----TTTCHHHHHHHHHHHHHHTSTTHHH-HHHHHHHHHHHHHHH
T ss_pred eEEEcH-HHH-HhhccCCCcccCC---C----CCcCHHHHHHHHHHHHHHHcccHHH-HHHHHHHHHHHHHHH
Confidence 987643 222 1211100 00110 1 1112222333345555554433332 666777777777765
No 214
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.61 E-value=7e-14 Score=138.24 Aligned_cols=261 Identities=12% Similarity=-0.020 Sum_probs=157.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.....+.......+...++.++++++++.+. ..+.+++||+||+..++++++..+..
T Consensus 72 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~-----~~v~~~~sGseA~~~aik~a~~~~~~---- 142 (472)
T 3hmu_A 72 GRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDL-----NHVFFAGGGSEANDTNIRMVRTYWQN---- 142 (472)
T ss_dssp CCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCHHHHHHHHHHHHHHHHHh----
Confidence 358888988888866443333333345566677888999886643 24899999999999999999875321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhcc------------eeEEEeccCCccc----cC--------HHHHHHHHh---
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFEV------------ELKEVKLEEGYYV----MN--------PVKAVELVD--- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~----~d--------~~~L~~~i~--- 200 (369)
.|.+ .+.+||+.+++|..+...+..++. ++..+|... .++ .| +++|+++++
T Consensus 143 ~g~~-~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~-~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 220 (472)
T 3hmu_A 143 KGQP-EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPN-WWAEGGDMDPEEFGLARARELEEAILELG 220 (472)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCC-HHHHCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCC-CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCc-cccCCcccCHHHHHHHHHHHHHHHHHhcC
Confidence 1211 245777777665543333322222 355565422 011 33 788999887
Q ss_pred -hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcC
Q 017569 201 -ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (369)
Q Consensus 201 -~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~ 275 (369)
+++++|++...++++|.+.+ +++|.++|+++ |+++|+|++|.++.. ..........-...|.++++
T Consensus 221 ~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~------gillI~DEv~~gfgr--~G~~~a~~~~~v~pdi~t~s- 291 (472)
T 3hmu_A 221 ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY------DILLIADEVICGFGR--TGNWFGTQTMGIRPHIMTIA- 291 (472)
T ss_dssp GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHHTCCCSEEEEC-
T ss_pred CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEccccCCcc--cCccchhHHhCCCCceeeec-
Confidence 45677777777778788766 99999999999 999999999987532 11111111111246788765
Q ss_pred ccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhh-HHHHHHH
Q 017569 276 HKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCV-DHKKLSS 353 (369)
Q Consensus 276 hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~-~~a~~l~ 353 (369)
|.+.++ ++.|+++.+++ .. +.+ ....... ..+. +-+....++..++|+.+..+++.+ +.. ++.++++
T Consensus 292 -K~l~gg~~plG~v~~~~~-i~-~~~--~~~~~~~---~~t~--~~np~a~aAa~aaL~~~~~~~~~~-~~~~~~~~~l~ 360 (472)
T 3hmu_A 292 -KGLSSGYAPIGGSIVCDE-VA-HVI--GKDEFNH---GYTY--SGHPVAAAVALENLRILEEENILD-HVRNVAAPYLK 360 (472)
T ss_dssp -GGGTTTSSCCEEEEEEHH-HH-HHH--TTSCBCC---CCTT--TTCHHHHHHHHHHHHHHHHTTHHH-HHHHTHHHHHH
T ss_pred -hhhhcCCcceEEEEECHH-HH-Hhc--ccCCccc---cCCC--CCCHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHH
Confidence 887665 67888888542 21 222 1110000 1111 111122233334555554443322 666 7889999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
+.|+++
T Consensus 361 ~~L~~l 366 (472)
T 3hmu_A 361 EKWEAL 366 (472)
T ss_dssp HHHHGG
T ss_pred HHHHHH
Confidence 999775
No 215
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.60 E-value=2.8e-14 Score=140.43 Aligned_cols=204 Identities=12% Similarity=-0.030 Sum_probs=132.7
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.....+.......+...+++++++++++.+. ..+++|+||++|+..++.+++..+..
T Consensus 67 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~ggseA~~~al~~~~~~~~~---- 137 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGF-----DRVFYTNSGSESVDTMIRMVRRYWDV---- 137 (459)
T ss_dssp CCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 357888888888766443333333445667788889999987654 24899999999999999998875421
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhc-------------ceeEEEeccC----CccccC--------HHHHHHHHh--
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFE-------------VELKEVKLEE----GYYVMN--------PVKAVELVD-- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G-------------~~v~~v~~~~----~~~~~d--------~~~L~~~i~-- 200 (369)
.|.+ .+++|++.+++|..+...+..++ .++..+++.. +.+ +| +++|+++++
T Consensus 138 ~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~ 215 (459)
T 4a6r_A 138 QGKP-EKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEI 215 (459)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-CCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHc
Confidence 1211 24678887777654433333222 1345555321 112 44 789999887
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+++++|++...++++|.+.+ +++|.++|+++ |+++|+|++|.++.. ..........-...|.++++
T Consensus 216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~G~~~~~~~~~~~pdi~t~s 287 (459)
T 4a6r_A 216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY------DVLLVADEVICGFGR--TGEWFGHQHFGFQPDLFTAA 287 (459)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ccccchHhhcCCCCCeeehh
Confidence 34566666666666677666 99999999999 999999999986432 11111111111246777765
Q ss_pred CccCCCCC-CCeEEEEEeC
Q 017569 275 GHKYGLVY-AGVGWVVWRT 292 (369)
Q Consensus 275 ~hK~l~~p-~g~g~l~~~~ 292 (369)
|.+.++ ++.|+++.++
T Consensus 288 --K~l~gg~~~lg~v~~~~ 304 (459)
T 4a6r_A 288 --KGLSSGYLPIGAVFVGK 304 (459)
T ss_dssp --GGGGTTSSCCEEEEECH
T ss_pred --hhhcCCCCCccceeeCH
Confidence 877655 6889888753
No 216
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.60 E-value=1.9e-13 Score=134.09 Aligned_cols=203 Identities=13% Similarity=0.020 Sum_probs=125.3
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++..... .......+...++.++++++++.+. ..+.+|+||++|+..++.+++..+..
T Consensus 61 ~~p~v~~A~~~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~sGseA~~~al~~~~~~~~~---- 130 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIAHS-TLLGMTNVPATQLAETLIDISPKKL-----TRVFYSDSGAEAMEIALKMAFQYWKN---- 130 (448)
T ss_dssp SCHHHHHHHHHHHTTCSCC-CCSSSEEHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccCc-cccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 3588889888888654321 1223444566788889999986543 24899999999999999998875321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhc-------------ceeEEEeccCCcccc-----------CHHHHHHHHh---
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFE-------------VELKEVKLEEGYYVM-----------NPVKAVELVD--- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~~-----------d~~~L~~~i~--- 200 (369)
.|.+ .+++|++.+++|......+..++ .++..+|... .++. |+++|+++++
T Consensus 131 ~G~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~ 208 (448)
T 3dod_A 131 IGKP-EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY-VYRSESGDPDECRDQCLRELAQLLEEHH 208 (448)
T ss_dssp TTCT-TCCEEEEEC-----------------------------CEEECCCC-CTTSSSCCHHHHHHHHHHHHHHHHHHHG
T ss_pred hCCC-CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc-cccCCccchhhhhHHHHHHHHHHHHhCC
Confidence 1211 14688888887655433332222 1234455432 2332 5899999997
Q ss_pred hcCcEEEEeeCC-CCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcC
Q 017569 201 ENTICVAAILGS-TLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (369)
Q Consensus 201 ~~~~~v~~~~~~-~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~ 275 (369)
+++++|++...+ +++|.+.+ +++|.++|+++ |+++|+|++|.++.. ..........-...|.++++
T Consensus 209 ~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~--~g~~~a~~~~~~~~di~t~s- 279 (448)
T 3dod_A 209 EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY------DVLMIVDEVATGFGR--TGKMFACEHENVQPDLMAAG- 279 (448)
T ss_dssp GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC-
T ss_pred CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--ccchhhhhhcCCCCCEEEec-
Confidence 345566666665 77787655 99999999999 999999999986432 11111111111236777754
Q ss_pred ccCCCCCC-CeEEEEEeC
Q 017569 276 HKYGLVYA-GVGWVVWRT 292 (369)
Q Consensus 276 hK~l~~p~-g~g~l~~~~ 292 (369)
|.+.+++ +.|+++.++
T Consensus 280 -K~l~~G~~~ig~v~~~~ 296 (448)
T 3dod_A 280 -KGITGGYLPIAVTFATE 296 (448)
T ss_dssp -GGGGTTSSCCEEEEEEH
T ss_pred -ccccCCcCceEEEEECH
Confidence 8887774 889888764
No 217
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.60 E-value=7.8e-14 Score=137.31 Aligned_cols=205 Identities=13% Similarity=-0.050 Sum_probs=132.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.....+.......+...++.++++++++.+. ..+.+|+||++|+..++.+++..+..
T Consensus 68 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~gGseA~~~al~~~~~~~~~---- 138 (460)
T 3gju_A 68 GRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGM-----SRVYFGLSGSDANETNIKLIWYYNNV---- 138 (460)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 357788888887765433333333445566778888999876554 24899999999999999998864321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhh-------------cceeEEEeccC----CccccC--------HHHHHHHHh--
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYF-------------EVELKEVKLEE----GYYVMN--------PVKAVELVD-- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~-------------G~~v~~v~~~~----~~~~~d--------~~~L~~~i~-- 200 (369)
.|.+ .+.+|++.+++|..+...+..+ +.++..+|+.. ++..++ +++|+++++
T Consensus 139 ~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 139 LGRP-EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 1211 2467887776664433222222 12355666432 111222 689999887
Q ss_pred --hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+++++|++...++++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pdi~t~s 289 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY------DVLLVADEVVTGFGR--LGTMFGSDHYGIKPDLITIA 289 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ccccchHhhcCCCCCeeeee
Confidence 45677888877777787655 99999999999 999999999986432 11111111111245777754
Q ss_pred CccCCCCC-CCeEEEEEeC
Q 017569 275 GHKYGLVY-AGVGWVVWRT 292 (369)
Q Consensus 275 ~hK~l~~p-~g~g~l~~~~ 292 (369)
|.+.++ ++.|+++.++
T Consensus 290 --K~l~gG~~~lg~v~~~~ 306 (460)
T 3gju_A 290 --KGLTSAYAPLSGVIVAD 306 (460)
T ss_dssp --GGGTTTSSCCEEEEEEH
T ss_pred --hhhcCCCCCeEEEEECH
Confidence 888766 5889888764
No 218
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.59 E-value=8.5e-14 Score=137.77 Aligned_cols=267 Identities=12% Similarity=-0.087 Sum_probs=157.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...+.+. +....+...++.++++++++.+. ..+.+++||++|+..++.+++..+..
T Consensus 71 ~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~sGseA~~~Aik~a~~~~~~---- 140 (476)
T 3i5t_A 71 GRREIVDAMAHQAMVLPYASP-WYMATSPAARLAEKIATLTPGDL-----NRIFFTTGGSTAVDSALRFSEFYNNV---- 140 (476)
T ss_dssp CCHHHHHHHHHHHHHCCCCCT-TTCBCHHHHHHHHHHHTTSSTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccCccc-CccCCHHHHHHHHHHHhcCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 368888888888765433222 13445667788889999986553 24899999999999999999876432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhh-c------------ceeEEEeccCC-c-cccC--------HHHHHHHHh----
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYF-E------------VELKEVKLEEG-Y-YVMN--------PVKAVELVD---- 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~-G------------~~v~~v~~~~~-~-~~~d--------~~~L~~~i~---- 200 (369)
.|.. .+.+||+.+++|..+...+..+ | .++..++.... . +..| +++|+++++
T Consensus 141 ~g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 141 LGRP-QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred cCCC-CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 2211 2457777776655433332222 2 12344443210 0 1122 789999887
Q ss_pred hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCcccc-ccCCCCcEEEEcC
Q 017569 201 ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSG 275 (369)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Dsi~~~~ 275 (369)
+++++|++..+++++|.+.+ +++|.++|+++ |+++|+|++|.++.. ........ ..-...|.++++
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~------gillI~DEv~~g~gr--~G~~~~~~~~~~v~pdi~t~s- 290 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH------DILYISDEVVTGFGR--CGEWFASEKVFGVVPDIITFA- 290 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHTTCCCCSEEEEC-
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--ccCceeeecccCCCcchhhhh-
Confidence 45678888888888887654 99999999999 999999999987432 11111111 111135777765
Q ss_pred ccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHH
Q 017569 276 HKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSF 354 (369)
Q Consensus 276 hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~ 354 (369)
|.+.++ ++.|+++.+++ .. +.+..............+. +-+.....+..++|+.+..+++.+ +..++.+++++
T Consensus 291 -K~l~~G~~plg~v~~~~~-i~-~~~~~~~~~~~~~~~~~t~--~~np~a~aAa~aaL~~~~~~~~~~-~~~~~~~~l~~ 364 (476)
T 3i5t_A 291 -KGVTSGYVPLGGLAISEA-VL-ARISGENAKGSWFTNGYTY--SNQPVACAAALANIELMEREGIVD-QAREMADYFAA 364 (476)
T ss_dssp -GGGGTTSSCCEEEEECHH-HH-HTTSGGGCTTCEECCCCTT--TTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHH
T ss_pred -hhhcCCCcCeEEEEECHH-HH-HHHhcCCcccccccccCCC--CcCHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHH
Confidence 888777 78888887542 21 2221110000000000111 111122333345555554444332 77888899999
Q ss_pred HHHhcC
Q 017569 355 FVIHSS 360 (369)
Q Consensus 355 ~L~~~g 360 (369)
.|++++
T Consensus 365 ~L~~l~ 370 (476)
T 3i5t_A 365 ALASLR 370 (476)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 998754
No 219
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.59 E-value=6.5e-14 Score=136.46 Aligned_cols=253 Identities=13% Similarity=-0.081 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+.++........ .......++++.++++++.+. ..+++|+||++|+..++.+++.. .
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~ea~~~a~~~~~~~-~------ 126 (433)
T 1zod_A 61 HPEIVSVIGEYAGKLDHLFSE--MLSRPVVDLATRLANITPPGL-----DRALLLSTGAESNEAAIRMAKLV-T------ 126 (433)
T ss_dssp CHHHHHHHHHHHHHCCCCCTT--CCCHHHHHHHHHHHHHSCTTC-----CEEEEESCHHHHHHHHHHHHHHH-H------
T ss_pred CHHHHHHHHHHHHhCcccccc--cCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh-h------
Confidence 577888888877553221111 223455667778999998754 24899999999999999876542 1
Q ss_pred CCCCCCCeEEecCCCcch-HHHHHhhh-----------cceeEEEeccCC-----------ccccCHHHHHHHHhh----
Q 017569 149 GKPYDKPNIVTGANVQVC-WEKFARYF-----------EVELKEVKLEEG-----------YYVMNPVKAVELVDE---- 201 (369)
Q Consensus 149 g~~~~~~~Vi~s~~~h~s-~~~~~~~~-----------G~~v~~v~~~~~-----------~~~~d~~~L~~~i~~---- 201 (369)
| +++|++.+++|.. ...+.... ..+++.+++... .+.+|+++|++++++
T Consensus 127 ~----~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (433)
T 1zod_A 127 G----KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSG 202 (433)
T ss_dssp T----CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCS
T ss_pred C----CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCC
Confidence 1 3578877766543 32222221 124555654310 123579999999973
Q ss_pred cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCcc
Q 017569 202 NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (369)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK 277 (369)
++++|+++..++++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++ |
T Consensus 203 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~~~g~--~g~~~~~~~~~~~~di~s~s--K 272 (433)
T 1zod_A 203 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEAR------GMLLILDEAQTGVGR--TGTMFACQRDGVTPDILTLS--K 272 (433)
T ss_dssp CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEEC--H
T ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--CchHhHHhhcCCCCCEEEec--c
Confidence 4556665544577897655 99999999999 999999999986432 11111111111235666544 8
Q ss_pred CCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHH
Q 017569 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVI 357 (369)
Q Consensus 278 ~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~ 357 (369)
.++++.+.|++++++ +.. +.+.. ..+.. ..+. +-+.....++.++++.+..+++.+ +..++.++++++|+
T Consensus 273 ~~~~G~~ig~~~~~~-~~~-~~~~~-~~~~~----~~t~--~~~~~~~~a~~aal~~~~~~~~~~-~~~~~~~~l~~~l~ 342 (433)
T 1zod_A 273 TLGAGLPLAAIVTSA-AIE-ERAHE-LGYLF----YTTH--VSDPLPAAVGLRVLDVVQRDGLVA-RANVMGDRLRRGLL 342 (433)
T ss_dssp HHHTTSSCEEEEECH-HHH-HHHHH-TTCCC----CCTT--TTCHHHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHH
T ss_pred cccCCCCeeEEEEhH-HHH-Hhhcc-CCCCC----CCCC--CcCHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHH
Confidence 877678899998864 222 22211 11110 0111 112222333445555554444322 67777888888887
Q ss_pred hc
Q 017569 358 HS 359 (369)
Q Consensus 358 ~~ 359 (369)
++
T Consensus 343 ~l 344 (433)
T 1zod_A 343 DL 344 (433)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 220
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.58 E-value=1.6e-13 Score=134.73 Aligned_cols=264 Identities=11% Similarity=-0.071 Sum_probs=151.2
Q ss_pred ChHHHH-H-HHHH---HhccCCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHH
Q 017569 68 MEPECD-K-LVMA---SINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (369)
Q Consensus 68 ~~~~v~-~-~~~~---~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (369)
.+|.+. + ++.+ .+..... +. .....+...++.+.++++++ .+. ..+.+|+||++|+..++.+++...
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~~-~~-~~~~~~~~~~la~~la~~~~~~~~-----~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNKP-SN-SDVYSVAMARFVETFARVLGDPAL-----PHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCCC-CT-TTCCCHHHHHHHHHHHHHHCCTTC-----CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCC-CC-cccCCHHHHHHHHHHHHhcCCCCC-----CEEEEeCchHHHHHHHHHHHHHHh
Confidence 357788 7 8888 6544322 11 11233445567777888887 222 358999999999999998876432
Q ss_pred HHHHHhcCCCCC-CCeEEecCCCcchHHH-HHhhh--------cc-----eeEEEeccC--Cc-------cccCHHHHHH
Q 017569 142 QQKRKEQGKPYD-KPNIVTGANVQVCWEK-FARYF--------EV-----ELKEVKLEE--GY-------YVMNPVKAVE 197 (369)
Q Consensus 142 ~~~~~~~g~~~~-~~~Vi~s~~~h~s~~~-~~~~~--------G~-----~v~~v~~~~--~~-------~~~d~~~L~~ 197 (369)
..+....|.+.. +++|++.+++|..+.. ++... +. ++..+|.+. .. ...++++|++
T Consensus 144 ~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~ 223 (449)
T 2cjg_A 144 SRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARA 223 (449)
T ss_dssp HHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHH
Confidence 111001121111 4688888876554322 22222 22 456666543 11 1367788999
Q ss_pred HHh---hcCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcE
Q 017569 198 LVD---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS 270 (369)
Q Consensus 198 ~i~---~~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds 270 (369)
+++ +++++|+++..++++|.+.+ +++|.++|+++ ++++|+|++|.++.. ......+...-...|.
T Consensus 224 ~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~--~g~~~~~~~~~~~~di 295 (449)
T 2cjg_A 224 AFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF------DALLIFDEVQTGCGL--TGTAWAYQQLDVAPDI 295 (449)
T ss_dssp HHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSE
T ss_pred HHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC------CcEEEEeccccCCCc--cCcceeecccCCCceE
Confidence 996 56778777777788997666 99999999999 999999999986432 1110011111124677
Q ss_pred EEEcCccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHH
Q 017569 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKK 350 (369)
Q Consensus 271 i~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~ 350 (369)
++++ |++ | .|++++++ +.. ..+. ..+........+. +-+.....++.++|+.+..+++.+ +..++.+
T Consensus 296 ~t~s--K~l--~--iG~~~~~~-~~~-~~l~--~~~~~~~~~~~t~--~~n~~~~~aa~aal~~~~~~~~~~-~~~~~~~ 362 (449)
T 2cjg_A 296 VAFG--KKT--Q--VCGVMAGR-RVD-EVAD--NVFAVPSRLNSTW--GGNLTDMVRARRILEVIEAEGLFE-RAVQHGK 362 (449)
T ss_dssp EEEC--GGG--S--SEEEEECG-GGG-GSTT--CTTTSTTSSCCSS--SSCHHHHHHHHHHHHHHHHHTHHH-HHHHHHH
T ss_pred EEec--Ccc--c--EEEEEECH-HHh-hhhh--hcccCCcccccCC--CCCHHHHHHHHHHHHHHHhccHHH-HHHHHHH
Confidence 7754 887 3 68888764 332 2110 0011111001111 112222334445555554443322 7788888
Q ss_pred HHHHHHHhc
Q 017569 351 LSSFFVIHS 359 (369)
Q Consensus 351 ~l~~~L~~~ 359 (369)
+++++|+++
T Consensus 363 ~l~~~L~~l 371 (449)
T 2cjg_A 363 YLRARLDEL 371 (449)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998864
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.58 E-value=1.2e-13 Score=134.63 Aligned_cols=193 Identities=10% Similarity=-0.016 Sum_probs=120.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.........+. ..++++.++++++ +. ....+++||++|+..++..++...
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~~~----~~~l~~~la~~~~-~~-----~~v~~~~~Gsea~~~ai~~a~~~~------ 133 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAPTEI----ENKLAKLVIERVP-SI-----EIVRMVNSGTEATMSALRLARGYT------ 133 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSCCHH----HHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHhhCcCcCCCCHH----HHHHHHHHHHhCC-CC-----CEEEEeCChHHHHHHHHHHHHHhh------
Confidence 4688888888887654332222233 3345556788775 22 248999999999999999887531
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHhhhcceeEEEeccCCcccc-------------CHHHHHHHHhh---cCcEEEEee
Q 017569 148 QGKPYDKPNIVTGANVQV-CWEKFARYFEVELKEVKLEEGYYVM-------------NPVKAVELVDE---NTICVAAIL 210 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~-s~~~~~~~~G~~v~~v~~~~~~~~~-------------d~~~L~~~i~~---~~~~v~~~~ 210 (369)
| +.+|++.+++|. ....++...|..+..++.....+.. |+++|++++++ ++++|++..
T Consensus 134 -~----~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 3k28_A 134 -G----RNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP 208 (429)
T ss_dssp -T----CCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred -C----CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 1 356776665543 3333333333332222221111111 89999999873 566777777
Q ss_pred CCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeE
Q 017569 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (369)
Q Consensus 211 ~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g 286 (369)
.++++|.+.+ +++|.++|+++ ++++|+|++|.++ . .......+..-...|.++++ |.++++++.|
T Consensus 209 ~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG 277 (429)
T 3k28_A 209 VAGNMGVVPPQPGFLEGLREVTEQN------GALLIFDEVMTGF-R--VAYNCGQGYYGVTPDLTCLG--KVIGGGLPVG 277 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTT-T--SSTTHHHHHHTCCCSEEEEC--GGGGTTSCCE
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEecccccc-c--cCcchHHHHhCCCCceehhh--hhhcCCCCeE
Confidence 7777788777 99999999999 9999999999864 2 11111111111235666654 8777778899
Q ss_pred EEEEeC
Q 017569 287 WVVWRT 292 (369)
Q Consensus 287 ~l~~~~ 292 (369)
+++.++
T Consensus 278 ~~~~~~ 283 (429)
T 3k28_A 278 AYGGKA 283 (429)
T ss_dssp EEEECH
T ss_pred EEEEcH
Confidence 988754
No 222
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.58 E-value=5.2e-14 Score=138.61 Aligned_cols=263 Identities=10% Similarity=-0.067 Sum_probs=157.4
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...... ......+...+++++++++++.+. ..+.+++||++|+..++.+++..+..+
T Consensus 92 ~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~L~e~la~~~~~~~-----~~v~~~~sGseA~~~Alk~a~~~~~~~--- 162 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMNHVM-FGGLTHEPAARLAKLLVDITPAGL-----DTVFFSDSGSVSVEVAAKMALQYWRGR--- 162 (457)
T ss_dssp TCHHHHHHHHHHHHHCSCCC-SSSEECHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHT---
T ss_pred CCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCcHHHHHHHHHHHHHHHHHhc---
Confidence 35788888888776533221 112233455577888999997654 248999999999999999988754321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhh--------------cceeEEEeccCC-ccccCHHHHHHHHh---hcCcEEEEe
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYF--------------EVELKEVKLEEG-YYVMNPVKAVELVD---ENTICVAAI 209 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~--------------G~~v~~v~~~~~-~~~~d~~~L~~~i~---~~~~~v~~~ 209 (369)
|.+ .+.+|++.+++|......+..+ ..++..+|...+ ....|+++|+++++ +++++|++.
T Consensus 163 -g~~-g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~e 240 (457)
T 3tfu_A 163 -GLP-GKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVE 240 (457)
T ss_dssp -TCT-TCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEEC
T ss_pred -CCC-CCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 211 2346777666554322222222 123445554321 12358999999998 567788888
Q ss_pred e-CCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-C
Q 017569 210 L-GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-A 283 (369)
Q Consensus 210 ~-~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~ 283 (369)
. +++++|.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.+++ .|.+.++ +
T Consensus 241 p~~~~~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~~g~gr--~G~~~a~~~~~~~pdiit~--sK~l~gG~~ 310 (457)
T 3tfu_A 241 PVVQGAGGMRFHDPRYLHDLRDICRRY------EVLLIFDEIATGFGR--TGALFAADHAGVSPDIMCV--GKALTGGYL 310 (457)
T ss_dssp SSEECTTTCEECCTHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEE--CGGGGTTSS
T ss_pred CCCcCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcCccCCcc--ccchhHhHhcCCCceEEEE--ChhhhCCCc
Confidence 8 8899998755 99999999999 999999999986432 1111111111124677765 4887666 4
Q ss_pred CeEEEEEeCCCCccccccc-ccC-ccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhcC
Q 017569 284 GVGWVVWRTKDDLPDELVF-HIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHSS 360 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~-~~~-y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~g 360 (369)
+.|+++.+++ .. +.+.. ... +.. ..+. +-+....++..++|+.+..+++.+ +..++.++++++|+++.
T Consensus 311 ~lG~v~~~~~-i~-~~~~~~~~~~~~~----~~t~--~~n~~a~aaa~aaL~~~~~~~~~~-~~~~~~~~l~~~L~~l~ 380 (457)
T 3tfu_A 311 SLAATLCTAD-VA-HTISAGAAGALMH----GPTF--MANPLACAVSVASVELLLGQDWRT-RITELAAGLTAGLDTAR 380 (457)
T ss_dssp CCEEEEEEHH-HH-HHHHHSSSCSCCC----CCTT--TTCHHHHHHHHHHHHHHHTSCHHH-HHHHHHHHHHHHHGGGG
T ss_pred ceEEEEEcHH-HH-HHhhccCCCceeE----ecCC--CcCHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHh
Confidence 7898888642 21 22210 011 010 0111 111222233335555554443332 77788899999998754
No 223
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.57 E-value=1.8e-13 Score=133.48 Aligned_cols=245 Identities=13% Similarity=-0.060 Sum_probs=147.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.+..... + ....++..+++++++++++ .. ..+.+++||++|+..++.+++...
T Consensus 73 ~~~~v~~a~~~~~~~~~~-~---~~~~~~~~~l~~~la~~~~-~~-----~~v~~~~sgseA~~~al~~ar~~~------ 136 (434)
T 2epj_A 73 KHPRVLEAVEEALARGWL-Y---GAPGEAEVLLAEKILGYVK-RG-----GMIRFVNSGTEATMTAIRLARGYT------ 136 (434)
T ss_dssp TCHHHHHHHHHHHHTCSC-C---SSCCHHHHHHHHHHHHHHC-TT-----CEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCCC-C---CCCCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 467888888888765321 1 1234455667788888884 22 238999999999999999865321
Q ss_pred cCCCCCCCeEEecCCCcchHHH-HHh-------------hhcc------eeEEEeccCCccccCHHHHHHHHhh---cCc
Q 017569 148 QGKPYDKPNIVTGANVQVCWEK-FAR-------------YFEV------ELKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~-~~~-------------~~G~------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (369)
.+++|++.+++|..+.. +.. ..|+ .+..+|. .|+++|++++++ +++
T Consensus 137 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~ 205 (434)
T 2epj_A 137 -----GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALERVFAEYGDRIA 205 (434)
T ss_dssp -----CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHHHHHHHHGGGEE
T ss_pred -----CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHHHHHHhCCCCEE
Confidence 13567776666544222 111 1232 2444443 279999999974 566
Q ss_pred EEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|+++..++++|.+.| +++|.++|+++ ++++|+|++|+++ . ..+....+..-...|.+++ .|+++
T Consensus 206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~s~--sK~l~ 274 (434)
T 2epj_A 206 GVIVEPVIANAGVIPPRREFLAALQRLSRES------GALLILDEVVTGF-R--LGLEGAQGYFNIEGDIIVL--GKIIG 274 (434)
T ss_dssp EEEECSSBCSSSCBCCCHHHHHHHHHHHHHH------TCEEEEEETTTTT-T--SSTTHHHHHHTCCCSEEEE--EGGGG
T ss_pred EEEEeCCcCCCCccCCCHHHHHHHHHHHHHc------CCEEEEEcchhce-e--CCcchhhHHhCCCCCeeee--cchhc
Confidence 7776666677998877 99999999999 9999999999864 2 1111111111124676654 59887
Q ss_pred CCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
++...|+++.++ +.. +.+...... ....+ .+-+.....++.++|+.+..+++.+ +..++.+++++.|++.
T Consensus 275 ~G~~~G~v~~~~-~~~-~~l~~~~~~----~~~~t--~~~~~~~~aa~~a~l~~~~~~~~~~-~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 275 GGFPVGAVAGSR-EVM-SLLTPQGKV----FNAGT--FNAHPITMAAGLATLKALEEEPVYS-VSREAAKALEEAASEV 344 (434)
T ss_dssp TTSSCEEEEECH-HHH-TTBTTTSSB----CCCCT--TTTCHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHH
T ss_pred CCcceeeeeecH-HHH-HhhccCCCc----ccCCC--CCcCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHH
Confidence 767789998864 222 222110000 00001 1112222344445555554433322 7778888888888764
No 224
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.57 E-value=1.8e-14 Score=138.93 Aligned_cols=250 Identities=11% Similarity=-0.040 Sum_probs=156.3
Q ss_pred CccccccccCCChH-HHHHHHHHHh--cc--CCCCCCCCcch-----HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCc
Q 017569 57 RLNLASFVTTWMEP-ECDKLVMASI--NK--NYVDMDEYPVT-----TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (369)
Q Consensus 57 ~~~l~~~~~~~~~~-~v~~~~~~~~--~~--n~~~~~~~~~~-----~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (369)
.++|+.+.|.++.+ .+.+++.+.. .. ....|....+. .++++++.+++. ..|.+.+. ...+++|+|+
T Consensus 24 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~--~~~i~~t~G~ 100 (391)
T 3bwn_A 24 VVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE--DRYIVVGTGS 100 (391)
T ss_dssp CEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS--SSEEEEEEHH
T ss_pred eeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC--CCeEEEeCCh
Confidence 35666666654433 3444432222 22 23445555566 899999888887 45765421 1358999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCC----eEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhc
Q 017569 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKP----NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN 202 (369)
Q Consensus 127 t~a~~~al~~~~~~~~~~~~~~g~~~~~~----~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~ 202 (369)
++++.+++.++.++ ++ +|++++++|..+...++..|++++.++++.+... .++
T Consensus 101 ~~al~~~~~~l~~~-------------Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~----------~~~ 157 (391)
T 3bwn_A 101 TQLCQAAVHALSSL-------------ARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGFD----------KKG 157 (391)
T ss_dssp HHHHHHHHHHHHHT-------------SSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTTCC----------CCS
T ss_pred HHHHHHHHHHhcCC-------------CCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHHcC----------CCC
Confidence 99999999888653 35 8999999999999999999999999998764322 257
Q ss_pred CcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-C
Q 017569 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-V 281 (369)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~-~ 281 (369)
+++|++++|+||||.+.+ +|++ +++ +.++++++|++|...-. . .... ....+.+..+.+|.++ .
T Consensus 158 ~k~v~l~~p~NPtG~~~~--~l~~--~~~----~~~~~ii~De~y~~~~~---~---~l~~-~~~~~i~~~S~SK~~g~~ 222 (391)
T 3bwn_A 158 PYIELVTSPNNPDGTIRE--TVVN--RPD----DDEAKVIHDFAYYWPHY---T---PITR-RQDHDIMLFTFSKITGHA 222 (391)
T ss_dssp CEEEEEESSCTTTCCCCC--CCC-----------CCCEEEEECTTCSTTT---S---CCCC-CBCCSEEEEEHHHHHSCG
T ss_pred CEEEEECCCCCCCchhHH--HHHH--Hhh----cCCCEEEEeCCCCCCCC---C---cccc-CCCCeEEEEechhhcCCC
Confidence 889999999999999975 4433 224 00499999999974111 0 1111 2245677888999874 4
Q ss_pred CCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhc------------HhhHHHH--HhhH
Q 017569 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG------------FEVIPSF--CCVD 347 (369)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg------------~~G~~~~--~~~~ 347 (369)
....|++++.+++.. ..+.....+.. .+-+ .+.++++...+. .+.++++ +..+
T Consensus 223 GlRiG~~~~~~~~l~-~~l~~~~~~~~---------~~~~---~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (391)
T 3bwn_A 223 GSRIGWALVKDKEVA-KKMVEYIIVNS---------IGVS---KESQVRTAKILNVLKETCKSESESENFFKYGREMMKN 289 (391)
T ss_dssp GGCEEEEEECCHHHH-HHHHHHHHHHH---------SSCC---HHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHH
T ss_pred ccceEEEEecCHHHH-HHHHHHhcccc---------cCCC---HHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHH
Confidence 466799987443332 22211111100 1111 233333333332 2345555 6778
Q ss_pred HHHHHHHHHHhcC
Q 017569 348 HKKLSSFFVIHSS 360 (369)
Q Consensus 348 ~a~~l~~~L~~~g 360 (369)
+.+++.+.|++.+
T Consensus 290 ~~~~l~~~L~~~~ 302 (391)
T 3bwn_A 290 RWEKLREVVKESD 302 (391)
T ss_dssp HHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCC
Confidence 8889999999874
No 225
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.57 E-value=9.8e-14 Score=136.18 Aligned_cols=246 Identities=13% Similarity=-0.028 Sum_probs=143.7
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.++.+.+++.+.++... .+ ....+++.+++++++++++ +. ..+.+++||++|+..++.+++...
T Consensus 74 ~~~~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~-~~-----~~v~~~~gg~eA~~~al~~ar~~~------ 137 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP-SI-----RKLRFTGSGTETTLLALRVARAFT------ 137 (453)
T ss_dssp TCHHHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT-TC-----SEEEEESCHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 45788899888886532 11 2356788899999999885 32 248999999999999999865321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHH-hh----------hcce------eEEEeccCCccccCHHHHHHHHhh---cCcEEE
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFA-RY----------FEVE------LKEVKLEEGYYVMNPVKAVELVDE---NTICVA 207 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~-~~----------~G~~------v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~ 207 (369)
.++.|++.+++|..+...+ .. .|+. +..+|. .|+++|++++++ ++++|+
T Consensus 138 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi 206 (453)
T 2cy8_A 138 -----GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREVFANHGSDIAAFI 206 (453)
T ss_dssp -----CCCEEEEECC----------------------------CGGGEEEECT------TCHHHHHHHHHHHGGGEEEEE
T ss_pred -----CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHHHHhcCCCEEEEE
Confidence 1346777777665433221 11 1331 222221 389999999974 566776
Q ss_pred EeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCC
Q 017569 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (369)
Q Consensus 208 ~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~ 283 (369)
++..++++|.+.| +++|.++|+++ ++++++|++|+++ . ..+....+..-...|.++ ..|+++++.
T Consensus 207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~s--~sK~l~~G~ 275 (453)
T 2cy8_A 207 AEPVGSHFGVTPVSDSFLREGAELARQY------GALFILDEVISGF-R--VGNHGMQALLDVQPDLTC--LAKASAGGL 275 (453)
T ss_dssp ECSSEHHHHTEECCHHHHHHHHHHHHHT------TCEEEEECTTTTT-T--TCTTHHHHHHTCCCSEEE--EEGGGGTTS
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecCcccc-c--cCchhhhHHhCCCCcEEE--EChhhhCCc
Confidence 6665677898777 99999999999 9999999999864 2 111111111111357665 459987777
Q ss_pred CeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHH-hcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~-lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
+.|+++.++ +.. +.+... . .+......+ .+-+.....++.++|+. + .+++.+ +..++.++++++|++.
T Consensus 276 ~~G~v~~~~-~~~-~~l~~~-~-~~~~~~~~t--~~~n~~~~aa~~aal~~~~-~~~~~~-~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 276 PGGILGGRE-DVM-GVLSRG-S-DRKVLHQGT--FTGNPITAAAAIAAIDTIL-EDDVCA-KINDLGQFAREAMNHL 344 (453)
T ss_dssp SCEEEEECH-HHH-TTSSSC-C------------CCCCHHHHHHHHHHHHHHH-HTTHHH-HHHHHHHHHHHHHHHH
T ss_pred ceEEEechH-HHH-HHhccc-c-CCCceeCCC--CCCCHHHHHHHHHHHHHHh-hhhHHH-HHHHHHHHHHHHHHHH
Confidence 889998864 221 221110 0 000000001 11222223344455555 4 343322 7777888888888764
No 226
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.56 E-value=2.4e-13 Score=133.61 Aligned_cols=199 Identities=10% Similarity=-0.036 Sum_probs=125.5
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.... +.......+...+++++++++++.+. ...+.+|+||+||+..+++.++..
T Consensus 81 ~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~~~~~----~~~v~~~~sGseA~~~alk~a~~~------- 148 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFTH-TCFMVTPYEQYVQVAELLNALTPGDH----DKRTALFNSGAEAVENAIKVARLA------- 148 (453)
T ss_dssp TCHHHHHHHHHHHHHCSC-CTTTTSCCHHHHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHH-------
T ss_pred CCHHHHHHHHHHHHhccc-cccCcCCCHHHHHHHHHHHHhCCCCC----CcEEEEeCcHHHHHHHHHHHHHHh-------
Confidence 367888888888765422 22222345566678888999987542 124899999999999999887653
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhhc--------------ceeEEEeccC---C--------ccccCHHHHHHHHhhc
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYFE--------------VELKEVKLEE---G--------YYVMNPVKAVELVDEN 202 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~G--------------~~v~~v~~~~---~--------~~~~d~~~L~~~i~~~ 202 (369)
.| +++|++.+++|..+...+..++ ..+..+|+.. + .+..+++.|++++.++
T Consensus 149 ~g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~ 224 (453)
T 4ffc_A 149 TG----RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQ 224 (453)
T ss_dssp HC----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGG
T ss_pred cC----CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCC
Confidence 11 4577777766553332222221 1456666641 1 1222356677777655
Q ss_pred CcEEEEeeCCCCcc-cCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCcc
Q 017569 203 TICVAAILGSTLTG-EFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (369)
Q Consensus 203 ~~~v~~~~~~~~tG-~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK 277 (369)
+..++++.|.+++| .+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.++++ |
T Consensus 225 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~g~--~g~~~a~~~~~~~pdi~t~s--K 294 (453)
T 4ffc_A 225 SLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN------GVVFIADEVQTGFAR--TGAWFASEHEGIVPDIVTMA--K 294 (453)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEEC--G
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEecCccCCCc--ccccchhhhcCCCcchHhhh--h
Confidence 55666666666665 4444 99999999999 999999999986432 11111111111245777754 8
Q ss_pred CCCCCCCeEEEEEeC
Q 017569 278 YGLVYAGVGWVVWRT 292 (369)
Q Consensus 278 ~l~~p~g~g~l~~~~ 292 (369)
.++++++.|+++.++
T Consensus 295 ~~~~G~~~G~~~~~~ 309 (453)
T 4ffc_A 295 GIAGGMPLSAVTGRA 309 (453)
T ss_dssp GGGTTSSCEEEEEEH
T ss_pred hhcCCcCeEEEEECH
Confidence 877778899998754
No 227
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.54 E-value=1e-12 Score=129.08 Aligned_cols=198 Identities=14% Similarity=0.018 Sum_probs=122.5
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.... +.......+...+++++++++++.+. .....+|+||+||+..+++.++..
T Consensus 78 ~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~~~~~----~~~v~~~~sGseA~~~Alk~a~~~------- 145 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDFTH-TCFMVTPYEGYVAVCEQLNRLTPVRG----DKRSALFNSGSEAVENAVKIARSH------- 145 (451)
T ss_dssp TCHHHHHHHHHHHTTCSC-CTTTTSCCHHHHHHHHHHHHHSSCCS----SEEEEEESSHHHHHHHHHHHHHHH-------
T ss_pred CCHHHHHHHHHHHHhccc-ccCCccCCHHHHHHHHHHHHhCCcCC----CCEEEEeCcHHHHHHHHHHHHHHh-------
Confidence 368888988888865422 22222345566678888999987432 124899999999999999888753
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHhhh--------------cceeEEEeccCCcc-------------ccCHHHHHHHHh
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFARYF--------------EVELKEVKLEEGYY-------------VMNPVKAVELVD 200 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~~~~--------------G~~v~~v~~~~~~~-------------~~d~~~L~~~i~ 200 (369)
.| +.+|++.+++|..+...+..+ ..++..+|+... + .-+++.+++.++
T Consensus 146 ~g----~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~l~ 220 (451)
T 3oks_A 146 TH----KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYP-FRDAEFGKELATDGELAAKRAITVID 220 (451)
T ss_dssp HC----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCH-HHHGGGCTTTTTCHHHHHHHHHHHHH
T ss_pred cC----CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcc-ccccccccccchhhHHHHHHHHHHHH
Confidence 11 457777766655333222222 114666766421 1 113455555554
Q ss_pred ----hcCcEEEEeeCCCCc-ccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEE
Q 017569 201 ----ENTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (369)
Q Consensus 201 ----~~~~~v~~~~~~~~t-G~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi 271 (369)
+++..++++.|.+++ |.+.+ +++|.++|+++ ++++|+|++|.++.. .......+..-...|.+
T Consensus 221 ~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~~pdi~ 292 (451)
T 3oks_A 221 KQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN------DVVFIADEVQTGFAR--TGAMFACEHEGIDPDLI 292 (451)
T ss_dssp HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEE
T ss_pred hhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc------CCEEEEEecccCCCc--cccchhhhhcCCCCCee
Confidence 244444455555554 55544 99999999999 999999999986432 11111111111246777
Q ss_pred EEcCccCCCCCCCeEEEEEeC
Q 017569 272 NVSGHKYGLVYAGVGWVVWRT 292 (369)
Q Consensus 272 ~~~~hK~l~~p~g~g~l~~~~ 292 (369)
+++ |.++++++.|+++.++
T Consensus 293 t~s--K~l~~G~~iG~v~~~~ 311 (451)
T 3oks_A 293 VTA--KGIAGGLPLSAVTGRA 311 (451)
T ss_dssp EEC--GGGGTTSSCEEEEEEH
T ss_pred eeh--hhhhCCcceEEEEECH
Confidence 654 8887778899988754
No 228
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.54 E-value=1.1e-12 Score=127.69 Aligned_cols=243 Identities=12% Similarity=0.031 Sum_probs=137.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++...... ++ .+...++.++++++++ +. ...++++||++|+..++..++...
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~--~~--~~~~~~la~~l~~~~~-~~-----~~v~~~~sGsea~~~al~~a~~~~------ 133 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFG--AP--TEMEVKMAQLVTDLVP-TM-----DMVRMVNSGTEATMSAIRLARGYT------ 133 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCS--SC--CHHHHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCcccC--CC--CHHHHHHHHHHHhhCC-CC-----CEEEEeCcHHHHHHHHHHHHHHhh------
Confidence 36888999988886643221 22 2344566777888886 32 248999999999999999876421
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHhhhcce-------------------eEEEeccCCccccCHHHHHHHHhh---cCc
Q 017569 148 QGKPYDKPNIVTGANVQVC-WEKFARYFEVE-------------------LKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s-~~~~~~~~G~~-------------------v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (369)
| +..|++.++.|.. ...++...|.. +..++. -|+++|++++++ +++
T Consensus 134 -~----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~ 202 (429)
T 4e77_A 134 -G----RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY------NDLASVRQAFEQYPQEVA 202 (429)
T ss_dssp -C----CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT------TCHHHHHHHHHHSTTTEE
T ss_pred -C----CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC------CCHHHHHHHHHhcCCCEE
Confidence 1 3566666555443 32222111111 111111 179999999974 445
Q ss_pred EEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|+++..++.+|.+.+ +++|.++|+++ ++++|+|++|.++ . .......+..-...|.+++ .|.++
T Consensus 203 ~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~-r--~g~~~~~~~~~~~pdi~t~--sK~~~ 271 (429)
T 4e77_A 203 CIIVEPVAGNMNCIPPLPEFLPGLRALCDEF------GALLIIDEVMTGF-R--VALAGAQDYYHVIPDLTCL--GKIIG 271 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHH------TCEEEEEETTTBT-T--TBTTCHHHHTTCCCSEEEE--EGGGG
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCc-c--cCcchHHHhcCCCCCeeee--ccccc
Confidence 5555544455566766 99999999999 9999999999865 2 1111111111113466654 48887
Q ss_pred CCCCeEEEEEeCCCCccccccccc-CccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
++.+.|+++.++ +.. +.+.... .+.++ . .+-+.....++.++|+.+..+++.+ +..++.++++++|++
T Consensus 272 ~G~~~G~~~~~~-~~~-~~l~~~~~~~~~~---t----~~~~~~~~aaa~aal~~~~~~~~~~-~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 272 GGMPVGAFGGRR-EVM-NALAPTGPVYQAG---T----LSGNPIAMAAGFACLTEISQVGVYE-TLTELTDSLATGLRH 340 (429)
T ss_dssp TTSCCEEEEECH-HHH-TTBTTTSSBCC-----C----CCCCHHHHHHHHHHHHHHTSTTHHH-HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECH-HHH-HHhccCCCccccC---C----CCCCHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHH
Confidence 778889887743 221 1211100 01110 1 1122223344445566554444332 666777777777765
No 229
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.50 E-value=1.8e-12 Score=126.04 Aligned_cols=243 Identities=12% Similarity=-0.051 Sum_probs=143.8
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHh
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (369)
.+|.+.+++.+.++.... + ....+++.++.++++++++ +. ....+++||++|+..++.+++...
T Consensus 69 ~~p~v~~a~~~~~~~~~~-~---~~~~~~~~~l~~~l~~~~~-~~-----~~v~~~~~g~ea~~~al~~ar~~~------ 132 (424)
T 2e7u_A 69 AHPKVLARVRETLERGLT-F---GAPSPLEVALAKKVKRAYP-FV-----DLVRFVNSGTEATMSALRLARGYT------ 132 (424)
T ss_dssp TCHHHHHHHHHHHHTCSC-C---SSCCHHHHHHHHHHHHHCT-TC-----CEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCCC-C---CCCCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 467888888888865321 1 1234556677788888885 32 248999999999999998765321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHH-hh-------------hcc------eeEEEeccCCccccCHHHHHHHHhh---cCc
Q 017569 148 QGKPYDKPNIVTGANVQVCWEKFA-RY-------------FEV------ELKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (369)
Q Consensus 148 ~g~~~~~~~Vi~s~~~h~s~~~~~-~~-------------~G~------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (369)
.++.|++.+++|..+...+ .. .|+ .+..+|. .|+++|++++++ +++
T Consensus 133 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~ 201 (424)
T 2e7u_A 133 -----GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLREVLKRRGEEIA 201 (424)
T ss_dssp -----CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHHHHHHHHGGGEE
T ss_pred -----CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHHHHHHhCCCCEE
Confidence 1356777776655433221 11 122 2333332 378999999973 455
Q ss_pred EEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC
Q 017569 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (369)
Q Consensus 205 ~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~ 280 (369)
+|+++..++++|.+.| +++|.++ +++ ++++++|++|+++ . ..+....+..-...|.++ ..|+++
T Consensus 202 ~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~s--~sK~l~ 269 (424)
T 2e7u_A 202 AIIFEPVVGNAGVLVPTEDFLKALHEA-KAY------GVLLIADEVMTGF-R--LAFGGATELLGLKPDLVT--LGKILG 269 (424)
T ss_dssp EEEECSSBCTTSCBCCCHHHHHHHHHG-GGG------TCEEEEECTTTTT-T--SSTTHHHHHHTCCCSEEE--ECGGGG
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHc------CCEEEEecCcccc-c--cchhHHHHHhCCCcchhh--hhhhhh
Confidence 5555444444898777 9999999 999 9999999999964 2 111111111111356664 569987
Q ss_pred CCCCeEEEEEeCCCCcccccccccC-ccCCCCCCccccCCcchhHHHHHHHHHHHhcH-hhHHHHHhhHHHHHHHHHHHh
Q 017569 281 VYAGVGWVVWRTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~-y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~-~G~~~~~~~~~a~~l~~~L~~ 358 (369)
++.+.|+++.++ +.. +.+..... +.+ .+ .+-+.....++.++|+.+.. +.+.+ +..++.++++++|++
T Consensus 270 ~G~~~G~~~~~~-~~~-~~~~~~~~~~~~---~t----~~~~~~~~aaa~aal~~~~~~~~~~~-~~~~~~~~l~~~L~~ 339 (424)
T 2e7u_A 270 GGLPAAAYAGRR-EIM-EKVAPLGPVYQA---GT----LSGNPLAMAAGLATLELLEENPGYYA-YLEDLGARLEAGLKE 339 (424)
T ss_dssp TTSSCEEEEECH-HHH-TTBTTTSSBCCC---CT----TCSCHHHHHHHHHHHHHHHHCTHHHH-HHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEcH-HHH-hhhcccCCcccC---CC----CCCCHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHH
Confidence 777889998864 222 22211000 110 01 11122223344455555433 22222 778888888888877
Q ss_pred c
Q 017569 359 S 359 (369)
Q Consensus 359 ~ 359 (369)
.
T Consensus 340 ~ 340 (424)
T 2e7u_A 340 V 340 (424)
T ss_dssp H
T ss_pred H
Confidence 4
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.41 E-value=4.3e-13 Score=130.84 Aligned_cols=194 Identities=12% Similarity=0.092 Sum_probs=135.6
Q ss_pred ccccccccCCCh-HHHHHHHHHHhc-cCCC--CCCCCc-c---hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHH
Q 017569 58 LNLASFVTTWME-PECDKLVMASIN-KNYV--DMDEYP-V---TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (369)
Q Consensus 58 ~~l~~~~~~~~~-~~v~~~~~~~~~-~n~~--~~~~~~-~---~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (369)
++|+.+.+...+ +.+.+++.+++. .+.. .|.... + ..+|++++.+++.+..+...+ ...+++|+|++++
T Consensus 59 i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~---~~~iv~t~G~~~a 135 (427)
T 2hox_A 59 ADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAK---DRYIVFGVGVTQL 135 (427)
T ss_dssp EECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCT---TCEEEEESHHHHH
T ss_pred EEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCC---CCEEEEeCCHHHH
Confidence 445555554433 456777777763 2222 244444 5 789999999888876553321 1358999999999
Q ss_pred HHHHHHHH--------HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh
Q 017569 130 IMLAGLAF--------KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE 201 (369)
Q Consensus 130 ~~~al~~~--------~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~ 201 (369)
+.+++.++ .+ .++.|+++.++|..+...++..|++++. +.+|+++|++++++
T Consensus 136 l~~~~~~l~~~~~~~~~~-------------~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~-------~~~d~~~l~~~~~~ 195 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDA-------------PESKVVAHAPFYPVFREQTKYFDKKGYV-------WAGNAANYVNVSNP 195 (427)
T ss_dssp HHHHHHHHSCCTTTCTTS-------------CCEEEEECSSCCHHHHHHHHHSCBTTEE-------EEEEGGGGTTCSCG
T ss_pred HHHHHHHHhhccccccCC-------------CCCEEEEeCCCcccHHHHHHHcCCeeee-------ecCCHHHHHHhhcC
Confidence 99988887 33 1468999999999999999999988752 45678888888888
Q ss_pred cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCC-
Q 017569 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL- 280 (369)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~- 280 (369)
++++|++++|+||||.+.+ + ++ . ++..++|.++-. ++.. ...+. ...+.+..+.+|.++
T Consensus 196 ~~k~v~l~~p~NPtG~~~~-~----~l--~------~~~~i~d~~~~~---~~~s---~~~~~-~~~~i~~~S~SK~~g~ 255 (427)
T 2hox_A 196 EQYIEMVTSPNNPEGLLRH-A----VI--K------GCKSIYDMVYYW---PHYT---PIKYK-ADEDILLFTMSKFTGH 255 (427)
T ss_dssp GGEEEEEESSCTTTCCCCC-C----SS--T------TCEEEEECTTCS---TTTS---CCCSC-BCCSEEEEEHHHHTSC
T ss_pred CceEEEEcCCCCCcccccH-H----HH--c------CCCEEEeecccC---CCCC---ccccC-CCceEEEEeChhcCCC
Confidence 8999999999999999988 4 23 2 456788877632 1110 01111 356888999999875
Q ss_pred CCCCeEEEEEeCCC
Q 017569 281 VYAGVGWVVWRTKD 294 (369)
Q Consensus 281 ~p~g~g~l~~~~~~ 294 (369)
.....|++++++++
T Consensus 256 ~G~RiG~~~~~~~~ 269 (427)
T 2hox_A 256 SGSRFGWALIKDES 269 (427)
T ss_dssp GGGCCEEEEECCHH
T ss_pred CCceEEEEEECCHH
Confidence 33568999986543
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.39 E-value=1.1e-11 Score=122.48 Aligned_cols=256 Identities=12% Similarity=-0.045 Sum_probs=145.8
Q ss_pred ChHHHHHHHHHHhcc----CCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~----n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (369)
.+|.+.+++.+.+.. +...+.. ....++++++.+.++++++.+. ..+.+++||+|||..++.+++..+..
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~-----~~v~f~~sGseA~~~Aik~a~~~~~~ 153 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGM-----SQLITMACGSCSNENAFKTIFMWYRS 153 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCc-----CEEEEeCCchhHHHHHHHHHHHHhhh
Confidence 367788888776532 1111111 2345677777776777664332 24899999999999999998754321
Q ss_pred H-HH-------------hcCCCC-CCCeEEecCCCcch-HHHHHhhhcc--------e---eEEEeccCCcc--------
Q 017569 144 K-RK-------------EQGKPY-DKPNIVTGANVQVC-WEKFARYFEV--------E---LKEVKLEEGYY-------- 188 (369)
Q Consensus 144 ~-~~-------------~~g~~~-~~~~Vi~s~~~h~s-~~~~~~~~G~--------~---v~~v~~~~~~~-------- 188 (369)
+ +. ..+.+. .+++||+.+..|.. ...++...|. . +..+++....+
T Consensus 154 ~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 233 (472)
T 1ohv_A 154 KERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKE 233 (472)
T ss_dssp HHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHH
T ss_pred hccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCcccccccc
Confidence 1 10 000011 13678877765443 3333333332 1 11233321000
Q ss_pred -----ccCHHHHHHHHhh------cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeeccccccccc
Q 017569 189 -----VMNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (369)
Q Consensus 189 -----~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (369)
..|+++|+++|++ ++++|++...++++|.+.| +++|.++|+++ |+++|+|++|.++..
T Consensus 234 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~- 306 (472)
T 1ohv_A 234 NQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKH------GCAFLVDEVQTGGGS- 306 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT-
T ss_pred chhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHh------CCEEEEeCcccCCCC-
Confidence 2378999999987 7888888877888998877 99999999999 999999999986322
Q ss_pred ccCCCccccccCC----CCcEEEEcCccC-CCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHH
Q 017569 254 FLYPDLEWDFRLP----LVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (369)
Q Consensus 254 ~~~~~~~~~~~~~----~~Dsi~~~~hK~-l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~ 328 (369)
. .. .+.+... .+|.++++ |. +. .|+++ + ++. . .+ ...+.. .|. +-+.....++
T Consensus 307 -~-g~-~~~~~~~gv~~~~Di~t~s--K~~l~----GG~~~-~-~~~-~-~~--~~~~~~-----~T~--~~~~~~~aaa 364 (472)
T 1ohv_A 307 -T-GK-FWAHEHWGLDDPADVMTFS--KKMMT----GGFFH-K-EEF-R-PN--APYRIF-----NTW--LGDPSKNLLL 364 (472)
T ss_dssp -T-SS-SSGGGGGCCSSCCSEEEEC--GGGSS----EEEEE-C-GGG-S-CS--SSSSSC-----CSS--SSCHHHHHHH
T ss_pred -C-CC-chhccccCCCCCCCEEEEc--ccccc----CCccC-c-hhh-c-cc--cccccc-----Ccc--CccHHHHHHH
Confidence 1 11 0111111 27888766 88 43 25554 3 221 1 10 010000 011 1112223344
Q ss_pred HHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 329 YYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 329 ~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
.++|+.+..+++.+ +..++.++|+++|+++
T Consensus 365 ~aal~~~~~~~~~~-~~~~~~~~l~~~L~~l 394 (472)
T 1ohv_A 365 AEVINIIKREDLLS-NAAHAGKVLLTGLLDL 394 (472)
T ss_dssp HHHHHHHHHTTHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHH-HHHHHHHHHHHHHHHH
Confidence 46666664444322 7778888998888775
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.92 E-value=4.3e-13 Score=131.96 Aligned_cols=247 Identities=11% Similarity=-0.093 Sum_probs=142.1
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 68 ~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
.+|.+.+++.+.+...... ....+.+.++.+.|+++++ .+ ...++++|+||+..+++.++...
T Consensus 117 ~~p~V~~Av~~q~~~~~~~----~~~~~~~~~Lae~L~~~~p~~~-------~v~~~nSGseA~~~Aik~ar~~t----- 180 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNL----STQTENEALFAEAVCDRFPSID-------LVRFTNSGTEANLMALATATAIT----- 180 (465)
Confidence 3577888887777553211 1123344456666888774 33 27899999999999999876421
Q ss_pred hcCCCCCCCeEEecCCCcchHHH-HH---hhhcceeEEEeccCCccccCHHHHHHHHh---hcCcEEEEeeCCCCcccCC
Q 017569 147 EQGKPYDKPNIVTGANVQVCWEK-FA---RYFEVELKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFE 219 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~~h~s~~~-~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~ 219 (369)
.+++||+.+..|..... ++ ...|+....+++. + -|+++|+++++ +++++|++....+++|.+.
T Consensus 181 ------gr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~---~-~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~ 250 (465)
T 2yky_A 181 ------GRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV---Y-NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVP 250 (465)
Confidence 13567776665543222 22 1223311122221 1 27889999998 5778888776566689776
Q ss_pred C----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 220 ~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
| +++|.++|+++ ++++++|++|. +-. .+...++..-...|.++ ..|+++++++.|+++.++. .
T Consensus 251 ~~~~~l~~l~~l~~~~------g~llI~DEv~~-~r~---g~~~a~~~~gv~pDi~t--~sK~lg~G~piG~v~~~~~-i 317 (465)
T 2yky_A 251 AERAFLDLLRAEASRC------GALLIFDEVMT-SRL---SGGGAQEMLGISADLTT--LGKYIGGGMSFGAFGGRRD-L 317 (465)
Confidence 5 99999999999 99999999998 522 11001111111356554 5699888777898887643 3
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHhc
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIHS 359 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~~ 359 (369)
. +.+... ..+......+..+. .....+..++|+.+..+++.+ +..++.++++++|++.
T Consensus 318 ~-~~l~~~--~~g~~~~~~T~~~n--pla~aAa~aaL~~l~~~~~~~-~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 318 M-ERFDPA--RDGAFAHAGTFNNN--ILTMSAGHAALTQIYTRQAAS-DLSASGDRFRANLNRI 375 (465)
Confidence 2 222110 00000001111111 111233335566665544322 7777888888888764
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.17 E-value=2.5e-09 Score=104.57 Aligned_cols=247 Identities=15% Similarity=0.017 Sum_probs=141.1
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.++......... .++.++.+.+++++... ....++++|+||+..|++.++...
T Consensus 103 H~hp~v~~Av~~q~~~~~~~~~~~----~~~~~lae~l~~~~p~~------~~v~f~~SGsEA~e~AiklAr~~t----- 167 (454)
T 4ao9_A 103 HSAPEIRDAVIEAMQGGINLTGHN----LLEGRLARLICERFPQI------EQLRFTNSGTEANLMALTAALHFT----- 167 (454)
T ss_dssp SCCHHHHHHHHHHHHTCSCCCSEE----SSHHHHHHHHHHHSTTC------SEEEEESSHHHHHHHHHHHHHHHH-----
T ss_pred CCCHHHHHHHHHHHhcCCCccCCc----HHHHHHHHHHHHhCCCC------CEEEEeCchHHHHHHHHHHHHhcc-----
Confidence 346888999888886543222222 23345556677776432 248899999999999999988752
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHhhh---cceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCC
Q 017569 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE 219 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~-~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~ 219 (369)
| +.+|+.-+ ..|-......... +.....+.+..+ |++.+++.+++ +..+|++.-.....|.+.
T Consensus 168 --g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n----d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 168 --G----RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN----DAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp --T----CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT----CHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred --c----CCeEEEEeCCcCCccccccccccCccCCCCcccCCCc----hHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 1 45666544 3443221111110 111122222222 68889988875 456677666566667775
Q ss_pred C----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCCCCeEEEEEeCCCC
Q 017569 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (369)
Q Consensus 220 ~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p~g~g~l~~~~~~~ 295 (369)
| +++|.++|+++ |+++|+|+++.|-.-.+... ..+.+ ..|.++ ..|.+++....|.++.+++ .
T Consensus 238 p~~~fL~~lr~lc~~~------g~lLI~DEV~tGR~G~~~a~---e~~gv-~PDi~t--~gK~lggG~Piga~~~~~e-i 304 (454)
T 4ao9_A 238 GQPDFLQALRESATQV------GALLVFDEVMTSRLAPHGLA---NKLGI-RSDLTT--LGKYIGGGMSFGAFGGRAD-V 304 (454)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEECTTGGGGSTTCHH---HHHTC-CCSEEE--EEGGGGTTSSCEEEEECHH-H
T ss_pred CchhhHHHHHHHHhhc------CCEEEEECCCcCCCccccch---hccCC-CCcEEE--eccccCCCCcceeeeeHHH-H
Confidence 5 99999999999 99999999987521111100 01112 357777 4577777777888887642 2
Q ss_pred cccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHHHHh
Q 017569 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFFVIH 358 (369)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~L~~ 358 (369)
. +.+....... ....|+.|. ....++..++|+.+..+++.+ +..++.++|+++|++
T Consensus 305 ~-~~~~~~~~~~---~h~~T~~gn--Pla~AAala~L~~l~~~~~~~-~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 305 M-ALFDPRTGPL---AHSGTFNNN--VMTMAAGYAGLTKLFTPEAAG-ALAERGEALRARLNA 360 (454)
T ss_dssp H-GGGCTTTCSC---CCCCTTTTC--HHHHHHHHHHHHHTSCHHHHH-HHHHHHHHHHHHHHH
T ss_pred H-HHHhhccCCc---cccCCCCCC--HHHHHHHHHHHHHHhccChhH-HHHHHHHHHHHHHHH
Confidence 2 2221111000 001122121 122344456677776555433 667778888888765
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.94 E-value=8.6e-08 Score=94.31 Aligned_cols=268 Identities=12% Similarity=-0.091 Sum_probs=146.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
..+|.+.+++.+.+++-......+....+.+.++.+.|.++...+. ....++++|+||+..|++.++..+..
T Consensus 83 h~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGsEA~e~AiKlAr~~~~~--- 154 (473)
T 4e3q_A 83 FDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDS-----GRVFYTNSGSEANDTMVKMLWFLHAA--- 154 (473)
T ss_dssp SCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSS-----CEEEEESSHHHHHHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCc-----cEEEEeCchHHHHHHHHHHHHHHHHh---
Confidence 4468888888887765432222222233444467777888876543 24889999999999999998875432
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc--------c---eeEEEeccC-----Ccccc-------CHHHHHHHHhh-
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V---ELKEVKLEE-----GYYVM-------NPVKAVELVDE- 201 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G--------~---~v~~v~~~~-----~~~~~-------d~~~L~~~i~~- 201 (369)
.|.. .+.+||.-.. .|-....++...| . ....++... +.... ..+++++.|.+
T Consensus 155 -~g~~-~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 232 (473)
T 4e3q_A 155 -EGKP-QKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE 232 (473)
T ss_dssp -TTCT-TCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCC-CcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh
Confidence 2212 2345665444 4443333332222 1 133444321 00111 13455555543
Q ss_pred ---cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEc
Q 017569 202 ---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (369)
Q Consensus 202 ---~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~ 274 (369)
+..+|++--.....|.+.| +++|.++|+++ |+++|+|+++.|+-. ...-..+...-...|.++
T Consensus 233 ~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~------gilLI~DEV~tGfGR--tG~~fa~e~~gv~PDi~t-- 302 (473)
T 4e3q_A 233 GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY------DIPVISDEVICGFGR--TGNTWGCVTYDFTPDAII-- 302 (473)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCCEEEECTTTSSST--TSSSCHHHHTTCCCSEEE--
T ss_pred CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc------ceEEeccCccccCCc--ccchhHHHhcCCCCChHH--
Confidence 3456666655555666532 99999999999 999999999887532 111111111112468777
Q ss_pred CccCCCCC-CCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHH
Q 017569 275 GHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSS 353 (369)
Q Consensus 275 ~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~ 353 (369)
..|.+.+. ...|.++++++ .. +.+.......+...-..|..|. ....++..++|+.+..+++.+ +..++.++|+
T Consensus 303 ~~K~l~gG~~Pl~av~~~~~-i~-~~~~~~~~~~~~~~hg~T~~Gn--pla~Aaala~L~~i~~~~l~~-~~~~~g~~l~ 377 (473)
T 4e3q_A 303 SSKNLTAGFFPMGAVILGPE-LS-KRLETAIEAIEEFPHGFTASGH--PVGCAIALKAIDVVMNEGLAE-NVRRLAPRFE 377 (473)
T ss_dssp ECGGGGTTSSCCEEEEECHH-HH-HHHHHHHHHHSCCCCCCTTTTC--HHHHHHHHHHHHHHHHSSHHH-HHHHHHHHHH
T ss_pred hcccccCCCCCcccccccHH-HH-HHhccccccccccccCCCCCCC--cchhhhhhhhhhhhccccHHH-HHHHHHHHHH
Confidence 45766555 67788887653 21 2221111100100001111121 122344446666776666654 6667889999
Q ss_pred HHHHhc
Q 017569 354 FFVIHS 359 (369)
Q Consensus 354 ~~L~~~ 359 (369)
++|+++
T Consensus 378 ~~L~~l 383 (473)
T 4e3q_A 378 ERLKHI 383 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.84 E-value=1.3e-06 Score=85.60 Aligned_cols=254 Identities=12% Similarity=-0.061 Sum_probs=140.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHH
Q 017569 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (369)
Q Consensus 67 ~~~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (369)
+.+|.+.+++.+.++...+.... ....+.+.++.+.|.+++..+. .....++++|+||+..|++.++...
T Consensus 80 h~~p~v~~Ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~----~~~v~f~~sGsEA~e~AlklAr~~t----- 149 (456)
T 4atq_A 80 ASDPAVVAAVQEAAAHFTHTCFM-VTPYEGYVAVTEQLNRLTPGDH----AKRTVLFNSGAEAVENAVKVARLAT----- 149 (456)
T ss_dssp TTCHHHHHHHHHHHHHCSCCTTT-TSCCHHHHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHHH-----
T ss_pred CCCHHHHHHHHHHHhhccCcccC-ccCcHHHHHHHHHHHHhCCCCC----CcEEEEeCChHHHHHHHHHHHhhhh-----
Confidence 34688888888776553222111 1112233356667888875432 1237889999999999999997742
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHhhhc-------------ceeEEEeccC-----CccccCHHHHHHHHh-------
Q 017569 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEE-----GYYVMNPVKAVELVD------- 200 (369)
Q Consensus 147 ~~g~~~~~~~Vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~-----~~~~~d~~~L~~~i~------- 200 (369)
| +.+|+.-.. .|-....++...| -++..+|... ....-+.+.+++.++
T Consensus 150 --~----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 223 (456)
T 4atq_A 150 --G----RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIG 223 (456)
T ss_dssp --C----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTC
T ss_pred --c----CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhc
Confidence 1 456665544 4433322222211 1355666531 101123344433332
Q ss_pred h-cCcEEEEeeCCCCcccCCC----HHHHHHHHHHhhhccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcC
Q 017569 201 E-NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (369)
Q Consensus 201 ~-~~~~v~~~~~~~~tG~~~~----l~~I~~l~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~ 275 (369)
. +..+|++--.....|.+.| +++|.++|+++ |+++|+|+++.|+.. ...-..+...-...|.++++
T Consensus 224 ~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~------gillI~DEV~tG~GR--tG~~~a~e~~gv~PDivt~g- 294 (456)
T 4atq_A 224 GDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK------GIVFIADEVQSGFCR--TGEWFAVDHEGVVPDIITMA- 294 (456)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGTTCCCSEEEEC-
T ss_pred CCceEEEEeccccCCCCccccchhhhHHHHHHHhhc------CCceEecccccccCC--ccccccccccCCCCchhhhh-
Confidence 2 3556666655555566533 99999999999 999999999887433 11111111111146888864
Q ss_pred ccCCCCCCCeEEEEEeCCCCcccccccccCccCCCCCCccccCCcchhHHHHHHHHHHHhcHhhHHHHHhhHHHHHHHHH
Q 017569 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEVIPSFCCVDHKKLSSFF 355 (369)
Q Consensus 276 hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~tr~~~~~l~~~~~l~~lg~~G~~~~~~~~~a~~l~~~ 355 (369)
|.+++....|.++.+++ .. ..+ .+...+ .|..|.. ...++..++|+.+..+++.+ +..++.++|.++
T Consensus 295 -K~lggg~P~~av~~~~~-i~-~~~--~~~~~~-----~Tf~gnp--la~aaala~L~~i~~~~l~~-~~~~~g~~l~~~ 361 (456)
T 4atq_A 295 -KGIAGGLPLSAITGRAD-LL-DAV--HPGGLG-----GTYGGNP--VACAAALAAIDTMEQHDLNG-RARHIEELALGK 361 (456)
T ss_dssp -GGGGTTSSCEEEEEEHH-HH-TTS--CTTSSC-----CSSSSCH--HHHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHH
T ss_pred -hcccCcCCceeeEecHH-HH-hcc--cccCCC-----CCCCCCh--HHHHhhHHHHHHHhhccHHH-HHHHHHHHHHHH
Confidence 66666677788888753 11 111 111111 1221221 22445556777777776644 666677777777
Q ss_pred HHh
Q 017569 356 VIH 358 (369)
Q Consensus 356 L~~ 358 (369)
|++
T Consensus 362 L~~ 364 (456)
T 4atq_A 362 LRE 364 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.07 E-value=4.2e-05 Score=80.19 Aligned_cols=205 Identities=10% Similarity=-0.089 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHhccCCCCCCCCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 017569 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (369)
Q Consensus 69 ~~~v~~~~~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (369)
+|.+.+++.+.++.-.+.. ......+-..++.+.|+++++.+. .....++++|+|||-.|+..++..+..+ .
T Consensus 399 ~p~i~~Ai~~Q~~~l~h~~-~~~~~~~~~~~Lae~L~~~~p~~~----l~~vff~~SGSeA~E~AlK~A~r~~~~~---~ 470 (831)
T 4a0g_A 399 QAELAREMGYTAARFGHVM-FPENVYEPALKCAELLLDGVGKGW----ASRVYFSDNGSTAIEIALKMAFRKFCVD---H 470 (831)
T ss_dssp HHHHHHHHHHHHHHHSSCC-CTTEECHHHHHHHHHHHHTTTTTT----CCEEEEESSHHHHHHHHHHHHHHHHHHT---T
T ss_pred CHHHHHHHHHHHhhccccc-ccccCCHHHHHHHHHHHHhCCCCC----CCEEEECCChhHHHHHHHHHHHHHHHhh---c
Confidence 5677777776665432221 111122233356666888876331 1248999999999999999984432211 1
Q ss_pred CCCC-------CCCeEEecC-CCcchHHHHHhhhcce----------------------------eEEEeccCCccc---
Q 017569 149 GKPY-------DKPNIVTGA-NVQVCWEKFARYFEVE----------------------------LKEVKLEEGYYV--- 189 (369)
Q Consensus 149 g~~~-------~~~~Vi~s~-~~h~s~~~~~~~~G~~----------------------------v~~v~~~~~~~~--- 189 (369)
|... .+.+||.-. ..|-....++...|.. +..+++... ++
T Consensus 471 g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~-~~~~~ 549 (831)
T 4a0g_A 471 NFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPES-FSEIA 549 (831)
T ss_dssp TC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTT-SCCCC
T ss_pred CCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCcc-ccccc
Confidence 2110 234566544 4555555555443311 011222110 00
Q ss_pred ------cC------------------HHHHHHHHhh--------cCcEEEEeeC-CCCcccCCC----HHHHHHHHHHhh
Q 017569 190 ------MN------------------PVKAVELVDE--------NTICVAAILG-STLTGEFED----VKLLHDLLTKKN 232 (369)
Q Consensus 190 ------~d------------------~~~L~~~i~~--------~~~~v~~~~~-~~~tG~~~~----l~~I~~l~~~~~ 232 (369)
-| .+.|++.|++ ++.+|++--. ....|.+.+ +++|.++|+++
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~- 628 (831)
T 4a0g_A 550 PEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNR- 628 (831)
T ss_dssp SSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHT-
T ss_pred cccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHc-
Confidence 01 2567777752 3445555443 466676643 99999999999
Q ss_pred hccCCCceEEeecccccccccccCCCccccccCCCCcEEEEcCccCCCCC-CCeEEEEEeC
Q 017569 233 EETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRT 292 (369)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Dsi~~~~hK~l~~p-~g~g~l~~~~ 292 (369)
|+++|+|+++.++.. ..........-...|.+| ..|.+.+. ...|++++++
T Consensus 629 -----gilLI~DEV~tGfGR--tG~~fa~e~~gv~PDiit--lsK~L~gG~~Plgav~~~~ 680 (831)
T 4a0g_A 629 -----KIPVIFDEVFTGFWR--LGVETTTELLGCKPDIAC--FAKLLTGGMVPLAVTLATD 680 (831)
T ss_dssp -----TCCEEEECTTTTTTT--TSBSSTHHHHSSCCSEEE--ECGGGGTTSSCCEEEEECH
T ss_pred -----CCeEEEEcCcccccc--CCCchhhHhcCCCCcEEE--EecccccCccCcEEEEECH
Confidence 999999999876432 111111111111357776 55877655 4668888864
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=57.95 E-value=39 Score=29.88 Aligned_cols=84 Identities=8% Similarity=-0.037 Sum_probs=51.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
..+.+||+.++=.++.-.... . +..|++.+-.-....+.++.+|.++..+.+|-. |.+++++.+
T Consensus 31 valVTGas~GIG~aiA~~la~-------~-----Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~----~~~~v~~~~ 94 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVA-------E-----GARVFITGRRKDVLDAAIAEIGGGAVGIQADSA----NLAELDRLY 94 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT----CHHHHHHHH
T ss_pred EEEEeCcCCHHHHHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC----CHHHHHHHH
Confidence 455557777775554443322 1 356666655555667777777888888887743 456666555
Q ss_pred hh------cCcEEEEeeCCCCcccCC
Q 017569 200 DE------NTICVAAILGSTLTGEFE 219 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~~ 219 (369)
++ +..+++-++|..+.+.+.
T Consensus 95 ~~~~~~~G~iDiLVNNAG~~~~~~~~ 120 (273)
T 4fgs_A 95 EKVKAEAGRIDVLFVNAGGGSMLPLG 120 (273)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCTT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChh
Confidence 43 345677777777666653
No 238
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=48.45 E-value=1.2e+02 Score=26.36 Aligned_cols=83 Identities=6% Similarity=-0.043 Sum_probs=48.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHh---hhcceeEEEeccCCccccCHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAV 196 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~ 196 (369)
..+.+||+.++=.++.-.... . +..|++.+..-....+.++ ..|.++..+.+|-. |.++++
T Consensus 11 valVTGas~GIG~aia~~la~-------~-----Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~----~~~~v~ 74 (255)
T 4g81_D 11 TALVTGSARGLGFAYAEGLAA-------A-----GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT----DELAIE 74 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHH-------T-----TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT----CHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC----CHHHHH
Confidence 566678887776655443332 1 3567776654444444333 34677777777643 455665
Q ss_pred HHHhh------cCcEEEEeeCCCCcccC
Q 017569 197 ELVDE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 197 ~~i~~------~~~~v~~~~~~~~tG~~ 218 (369)
+.+++ +..+++-++|....+.+
T Consensus 75 ~~~~~~~~~~G~iDiLVNNAG~~~~~~~ 102 (255)
T 4g81_D 75 AAFSKLDAEGIHVDILINNAGIQYRKPM 102 (255)
T ss_dssp HHHHHHHHTTCCCCEEEECCCCCCCCCG
T ss_pred HHHHHHHHHCCCCcEEEECCCCCCCCCh
Confidence 55543 34577777777766665
No 239
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=45.97 E-value=23 Score=32.52 Aligned_cols=54 Identities=15% Similarity=0.020 Sum_probs=40.1
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.++.+++|..+.-+|..+.+.. -+..|++|+..-..-...++.+|++|+.++..
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~G------------~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMKG------------YKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT------------CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEEeCCcHHHHHHHHHHHHcC------------CcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 3667778888888887776441 12478889877777777888999999888754
No 240
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=45.43 E-value=1.3e+02 Score=25.92 Aligned_cols=83 Identities=12% Similarity=-0.018 Sum_probs=46.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++...........++.+|.++..+.+|-. |.+++++.+
T Consensus 29 ~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 92 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHA-------Q-----GAIVGLHGTREDKLKEIAADLGKDVFVFSANLS----DRKSIKQLA 92 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT----SHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC----CHHHHHHHH
Confidence 466667776665544432221 1 345655554444555666666778888887743 456666655
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++....+.+
T Consensus 93 ~~~~~~~g~iD~lvnnAg~~~~~~~ 117 (266)
T 3grp_A 93 EVAEREMEGIDILVNNAGITRDGLF 117 (266)
T ss_dssp HHHHHHHTSCCEEEECCCCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCc
Confidence 42 45677777776655543
No 241
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=41.49 E-value=87 Score=26.89 Aligned_cols=71 Identities=8% Similarity=0.047 Sum_probs=45.9
Q ss_pred cchHHHHHhhh---cce-eEEEeccCCccccCHHHHHHHHh---hcCcEEEEeeCCCCcccC--CCHHHHHHHHHHhhhc
Q 017569 164 QVCWEKFARYF---EVE-LKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEE 234 (369)
Q Consensus 164 h~s~~~~~~~~---G~~-v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~--~~l~~I~~l~~~~~~~ 234 (369)
-.+++.++.++ |+. +++.|... .-.+++++...+ +.-.++ -|||-+ +++++|.++|.+.
T Consensus 144 ~V~vetAiaml~dmG~~SvKffPm~G---l~~l~E~~avAka~a~~g~~l------EPTGGIdl~N~~~I~~i~l~a--- 211 (249)
T 3m0z_A 144 IVPLETAIALLKDMGGSSIKYFPMGG---LKHRAEFEAVAKACAAHDFWL------EPTGGIDLENYSEILKIALDA--- 211 (249)
T ss_dssp EEEHHHHHHHHHHTTCCEEEECCCTT---TTTHHHHHHHHHHHHHTTCEE------EEBSSCCTTTHHHHHHHHHHH---
T ss_pred eeeHHHHHHHHHHcCCCeeeEeecCC---cccHHHHHHHHHHHHHcCceE------CCCCCccHhhHHHHHHHHHHc---
Confidence 34566665543 554 77777764 334555554433 333322 678887 6899999999999
Q ss_pred cCCCceEEeeccccc
Q 017569 235 TGWDTPIHVDAASGG 249 (369)
Q Consensus 235 ~~~~~~l~vD~a~~~ 249 (369)
|+..+.=-.|+.
T Consensus 212 ---Gv~~viPHIYss 223 (249)
T 3m0z_A 212 ---GVSKIIPHIYSS 223 (249)
T ss_dssp ---TCSCBCCBCCGG
T ss_pred ---CCCeecccccce
Confidence 887776666664
No 242
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=38.63 E-value=1.3e+02 Score=25.60 Aligned_cols=77 Identities=9% Similarity=0.008 Sum_probs=41.4
Q ss_pred EEecCCCcch-------HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHH
Q 017569 157 IVTGANVQVC-------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (369)
Q Consensus 157 Vi~s~~~h~s-------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~ 229 (369)
++++...++. +...++..|..+..+..+.+ ..-..+.++..+..+...|++.... . +.+.++.+.++
T Consensus 13 ~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiI~~~~~-~----~~~~~~~~~~~ 86 (293)
T 3l6u_A 13 FTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RISEREQILEFVHLKVDAIFITTLD-D----VYIGSAIEEAK 86 (293)
T ss_dssp EEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHHHHHHHHHHHTTCSEEEEECSC-T----TTTHHHHHHHH
T ss_pred EEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEecCC-h----HHHHHHHHHHH
Confidence 5556544432 33455566888877766532 2222355566666677777654332 2 23445555666
Q ss_pred HhhhccCCCceEE-eec
Q 017569 230 KKNEETGWDTPIH-VDA 245 (369)
Q Consensus 230 ~~~~~~~~~~~l~-vD~ 245 (369)
+. +++++ +|.
T Consensus 87 ~~------~iPvV~~~~ 97 (293)
T 3l6u_A 87 KA------GIPVFAIDR 97 (293)
T ss_dssp HT------TCCEEEESS
T ss_pred Hc------CCCEEEecC
Confidence 66 66544 443
No 243
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=38.59 E-value=20 Score=30.03 Aligned_cols=49 Identities=12% Similarity=0.206 Sum_probs=37.4
Q ss_pred CHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
|.+.|+++++.....+++.. |.+..++++.+.++++.+ -+++|+|-..|
T Consensus 18 ~~~~l~~al~s~~~~ifll~-----g~i~~l~~~v~~lk~~~K----~v~Vh~Dli~G 66 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVMLE-----THVAQLKALVKYAQAGGK----KVLLHADLVNG 66 (192)
T ss_dssp SSHHHHHHTTSSCCEEEECS-----EETTTHHHHHHHHHHTTC----EEEEEGGGEET
T ss_pred CHHHHHHHHcCCCCEEEEec-----CcHHHHHHHHHHHHHcCC----eEEEecCchhc
Confidence 56889999987777776544 455789999999999843 57788887765
No 244
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=37.41 E-value=1.9e+02 Score=24.63 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=51.8
Q ss_pred CeEEecC-CCcc-hHHHHHhhhcceeEEEeccC-------CccccCHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHH
Q 017569 155 PNIVTGA-NVQV-CWEKFARYFEVELKEVKLEE-------GYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 155 ~~Vi~s~-~~h~-s~~~~~~~~G~~v~~v~~~~-------~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
..++++. ..+. .+....+..+.++..+|+.. +.+.|++++..++++. +++.++.++-++..-.-.+.+++
T Consensus 161 ~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l 240 (264)
T 3rpc_A 161 PTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDV 240 (264)
T ss_dssp CCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHH
T ss_pred cEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHH
Confidence 3566554 3333 34455566788888888862 2478899887777754 56778877766543344678889
Q ss_pred HHHHHHh
Q 017569 225 HDLLTKK 231 (369)
Q Consensus 225 ~~l~~~~ 231 (369)
.+.+++.
T Consensus 241 ~~~~~~~ 247 (264)
T 3rpc_A 241 RKFIKGN 247 (264)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9888877
No 245
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=35.12 E-value=2.2e+02 Score=24.53 Aligned_cols=83 Identities=14% Similarity=0.075 Sum_probs=47.7
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++...............|..+..+.+|-. |.+++++++
T Consensus 29 ~vlVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 92 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAK-------N-----GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS----SAKDAESMV 92 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC----CHHHHHHHH
Confidence 455557776665544433221 1 345665554444555555556777878877643 456666655
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++....+.+
T Consensus 93 ~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 93 EKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCc
Confidence 43 45677777776655544
No 246
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=34.66 E-value=2.1e+02 Score=24.10 Aligned_cols=83 Identities=10% Similarity=-0.030 Sum_probs=47.7
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++...........+..+|.++..+.+|-. |.+++++.+
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 71 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAA-------D-----GATVIVSDINAEGAKAAAASIGKKARAIAADIS----DPGSVKALF 71 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT----CHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC----CHHHHHHHH
Confidence 455557666664444332221 1 346666555545555666666777777777643 456666655
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++..+.+..
T Consensus 72 ~~~~~~~g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 72 AEIQALTGGIDILVNNASIVPFVAW 96 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCc
Confidence 43 45677777776665544
No 247
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=33.21 E-value=51 Score=29.79 Aligned_cols=53 Identities=17% Similarity=0.091 Sum_probs=35.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++.+
T Consensus 76 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 76 ILEPTSGNTGISLAMAARLK---------G---YRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 55556777777666555433 1 12467888876555667788899999988753
No 248
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=32.73 E-value=1.7e+02 Score=25.30 Aligned_cols=67 Identities=6% Similarity=-0.039 Sum_probs=35.7
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE-eec
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VDA 245 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~-vD~ 245 (369)
+...++..|..+.....+.+ ..-..+.++..+..+...|++...... .+.+..+.+++. +++++ +|.
T Consensus 24 i~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~------~iPvV~~~~ 91 (313)
T 3m9w_A 24 FVKKAESLGAKVFVQSANGN-EETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVVKEAKQE------GIKVLAYDR 91 (313)
T ss_dssp HHHHHHHTSCEEEEEECTTC-HHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHHHHHHHHTT------TCEEEEESS
T ss_pred HHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHC------CCeEEEECC
Confidence 44455566877776665432 222234555666666766665443222 344555566666 66554 443
No 249
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=32.64 E-value=47 Score=25.37 Aligned_cols=43 Identities=9% Similarity=-0.040 Sum_probs=30.6
Q ss_pred HHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 192 PVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
++.++++.+..++.|+++.|. .+ +++.++|+++ |+.++ ..|.+
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~-----~~--~e~~~~a~~~------Girvv-~nC~g 114 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGT-----EN--EELEEILSEN------GIEPV-IGCTL 114 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTC-----CC--HHHHHHHHHT------TCEEE-ESCHH
T ss_pred HHHHHHHHhcCCCEEEECCCC-----Ch--HHHHHHHHHc------CCeEE-CCcCe
Confidence 344666666677777776553 22 6899999999 99887 46654
No 250
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=32.42 E-value=2.6e+02 Score=24.53 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=40.5
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH---hh-cCcEEEEeeCCCCcccCCCHHHHHHHHHH
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~ 230 (369)
..+++ +|.++...++.+|+++..+.--.....+.+.+|.+.+ ++ +.++|+.....++ +.+-.++++
T Consensus 180 ~~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~la~~ 249 (286)
T 3gi1_A 180 KTFVT---QHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIAHAIAKS 249 (286)
T ss_dssp CEEEE---EESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHHHHHHHT
T ss_pred CEEEE---ECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHHHHHH
Confidence 34554 4667777889999997765432112456666666554 43 4566665433322 223356777
Q ss_pred hhhccCCCceEE
Q 017569 231 KNEETGWDTPIH 242 (369)
Q Consensus 231 ~~~~~~~~~~l~ 242 (369)
. |+.+.
T Consensus 250 ~------g~~v~ 255 (286)
T 3gi1_A 250 T------GAKVK 255 (286)
T ss_dssp T------TCEEE
T ss_pred h------CCeEE
Confidence 7 77654
No 251
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=32.37 E-value=2.4e+02 Score=24.25 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=47.9
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++...........+..+|.++..+.+|-. |.+++++.+
T Consensus 31 ~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 94 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLAD-------E-----GCHVLCADIDGDAADAAATKIGCGAAACRVDVS----DEQQIIAMV 94 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHH-------T-----TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC----CHHHHHHHH
Confidence 466667776665544332221 1 345665554444555666666777888877643 456666555
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++....+.+
T Consensus 95 ~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 95 DACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCh
Confidence 43 45677777776655544
No 252
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=32.08 E-value=2.5e+02 Score=24.98 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=41.6
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh---h-cCcEEEEeeCCCCcccCCCHHHHHHHHHH
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~ 230 (369)
..+++. |.++...++.+|++...+.-......+.+.+|.+.++ + +.++|+.. ++.+ -+.+-.++++
T Consensus 191 ~~~v~~---H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e-~~~~------~~~~~~ia~e 260 (312)
T 2o1e_A 191 KEFITQ---HTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFE-EIAS------SKVADTLASE 260 (312)
T ss_dssp CEEEES---SCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECS-SCCC------HHHHHHHHHH
T ss_pred CEEEEE---CCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCC------hHHHHHHHHH
Confidence 345553 6677788999999976553211225677777777665 3 34555533 3222 2344456777
Q ss_pred hhhccCCCceE
Q 017569 231 KNEETGWDTPI 241 (369)
Q Consensus 231 ~~~~~~~~~~l 241 (369)
. ++.+
T Consensus 261 ~------g~~v 265 (312)
T 2o1e_A 261 I------GAKT 265 (312)
T ss_dssp T------CCEE
T ss_pred h------CCcE
Confidence 7 7665
No 253
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=31.56 E-value=1.8e+02 Score=25.36 Aligned_cols=67 Identities=4% Similarity=-0.115 Sum_probs=37.3
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE-eec
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VDA 245 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~-vD~ 245 (369)
+...++..|..+.....+.+ ..-..+.++..+..++..|++.... + +......+.+++. +++++ +|.
T Consensus 25 i~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~~~~~~vdgiIi~~~~-~----~~~~~~~~~~~~~------giPvV~~~~ 92 (330)
T 3uug_A 25 IVKQLQEAGYKTDLQYADDD-IPNQLSQIENMVTKGVKVLVIASID-G----TTLSDVLKQAGEQ------GIKVIAYDR 92 (330)
T ss_dssp HHHHHHHTTCEEEEEECTTC-HHHHHHHHHHHHHHTCSEEEECCSS-G----GGGHHHHHHHHHT------TCEEEEESS
T ss_pred HHHHHHHcCCEEEEeeCCCC-HHHHHHHHHHHHHcCCCEEEEEcCC-c----hhHHHHHHHHHHC------CCCEEEECC
Confidence 34455666888776664432 2223455666677777777654332 2 2345555666667 76654 443
No 254
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=31.48 E-value=22 Score=33.81 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=29.1
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.++-.|+.++++++++-|+++ ||.|++|.++.-
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 101 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNV------GVRIYVDAVINH 101 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred eCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 456779999999999999999 999999988653
No 255
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=31.46 E-value=1.2e+02 Score=26.39 Aligned_cols=70 Identities=10% Similarity=0.092 Sum_probs=44.9
Q ss_pred chHHHHHhhh---cce-eEEEeccCCccccCHHHHHHHHh---hcCcEEEEeeCCCCcccC--CCHHHHHHHHHHhhhcc
Q 017569 165 VCWEKFARYF---EVE-LKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEET 235 (369)
Q Consensus 165 ~s~~~~~~~~---G~~-v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~--~~l~~I~~l~~~~~~~~ 235 (369)
.+++.++.++ |+. +++.|... .-.+++++...+ +.-.++ -|||-+ +++++|.++|.+.
T Consensus 168 V~vetAiaml~dmG~~SvKffPM~G---l~~leEl~avAkAca~~g~~l------EPTGGIdl~Nf~~I~~i~l~a---- 234 (275)
T 3m6y_A 168 VPIKTAIALVRDMGGNSLKYFPMKG---LAHEEEYRAVAKACAEEGFAL------EPTGGIDKENFETIVRIALEA---- 234 (275)
T ss_dssp EEHHHHHHHHHHHTCCEEEECCCTT---TTTHHHHHHHHHHHHHHTCEE------EEBSSCCTTTHHHHHHHHHHT----
T ss_pred eeHHHHHHHHHHcCCCeeeEeecCC---cccHHHHHHHHHHHHHcCceE------CCCCCccHhHHHHHHHHHHHc----
Confidence 3466655543 555 77778764 334556555433 333322 678887 6899999999999
Q ss_pred CCCceEEeeccccc
Q 017569 236 GWDTPIHVDAASGG 249 (369)
Q Consensus 236 ~~~~~l~vD~a~~~ 249 (369)
|+..+.=-.|+.
T Consensus 235 --Gv~~viPHIYsS 246 (275)
T 3m6y_A 235 --NVEQVIPHVYSS 246 (275)
T ss_dssp --TCSCBCCEECGG
T ss_pred --CCCeecccccce
Confidence 877766666664
No 256
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=31.06 E-value=2e+02 Score=23.32 Aligned_cols=54 Identities=7% Similarity=-0.194 Sum_probs=33.1
Q ss_pred hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccCCCHHHH
Q 017569 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
.+...+...|+++..+.+-+| |.+.|++++.+ +..+|+.+.|+.+ |.-|-..+.
T Consensus 27 ~l~~~L~~~G~~v~~~~iv~D----d~~~I~~~l~~a~~~~DlVittGG~g~-~~~D~T~ea 83 (172)
T 3kbq_A 27 FIGNFLTYHGYQVRRGFVVMD----DLDEIGWAFRVALEVSDLVVSSGGLGP-TFDDMTVEG 83 (172)
T ss_dssp HHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHHHCSEEEEESCCSS-STTCCHHHH
T ss_pred HHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhcCCEEEEcCCCcC-CcccchHHH
Confidence 455566778999887776555 45666665543 3566666666555 666555443
No 257
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=30.01 E-value=79 Score=29.94 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=35.8
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+...|..+.+. | -+..|++|+..-..-...++.+|++|+.++..
T Consensus 178 VV~aSsGNhG~AlA~aAa~~---------G---l~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~ 230 (430)
T 4aec_A 178 LVEPTSGNTGIGLAFIAASR---------G---YRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (430)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEECCCHHHHHHHHHHHHh---------C---CEEEEEEcCCCCHHHHHHHHHCCCEEEEECCC
Confidence 45566777777666665433 1 12467888876666667788899999888753
No 258
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=29.90 E-value=71 Score=28.93 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=35.1
Q ss_pred EEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++.+
T Consensus 76 v~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 76 VESSSGNTGVSLAHLGAIR---------G---YKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp EEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCCHHHHHHHHHHHHh---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 5556677777666555433 1 12467888876555667778899999988754
No 259
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=29.10 E-value=73 Score=28.42 Aligned_cols=53 Identities=15% Similarity=0.096 Sum_probs=35.1
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++.+
T Consensus 70 vv~assGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 70 ILEPTSGNTGIALAMVCAAR---------G---YRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 55566777777666555432 1 12467888765555666778899999988754
No 260
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=27.32 E-value=62 Score=28.63 Aligned_cols=69 Identities=16% Similarity=0.216 Sum_probs=41.8
Q ss_pred CcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHHh---h-cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCC
Q 017569 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (369)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~ 237 (369)
.|.++...++.+|++...+. +.++ ..+.+.+|.+.++ + +.++|+.. ++.+ ..-.+.|.++|++.
T Consensus 169 ~H~af~Y~~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~e-~~~~---~~~~~~l~~~a~~~------ 237 (282)
T 3mfq_A 169 PHDAFNYFAASYDFTLYAPQGVSTD-SEVANSDMIETVNLIIDHNIKAIFTE-STTN---PERMKKLQEAVKAK------ 237 (282)
T ss_dssp SSSCCHHHHHHTTCEEECSSCSSSC-SCCCHHHHHHHHHHHHHHTCCEEECB-TTSC---THHHHHHHHHHHTT------
T ss_pred ECchHHHHHHHCCCeEecccccCCC-CCCCHHHHHHHHHHHHHcCCCEEEEe-CCCC---hHHHHHHHHHHHhc------
Confidence 36667778899999866442 2222 3566666666554 3 55666633 2222 12367788889988
Q ss_pred CceEE
Q 017569 238 DTPIH 242 (369)
Q Consensus 238 ~~~l~ 242 (369)
|+.+.
T Consensus 238 g~~v~ 242 (282)
T 3mfq_A 238 GGQVE 242 (282)
T ss_dssp SCCCE
T ss_pred CCceE
Confidence 76554
No 261
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=27.10 E-value=3e+02 Score=23.64 Aligned_cols=78 Identities=10% Similarity=0.028 Sum_probs=45.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++..-.-.........++..+..+.+|-. |.+++++++
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~----d~~~v~~~~ 81 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELAR-------R-----GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ----DLSSVRRFA 81 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT----CHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC----CHHHHHHHH
Confidence 455557776665444432221 1 245655544444455566666777888887743 677888777
Q ss_pred hh--cCcEEEEeeCCC
Q 017569 200 DE--NTICVAAILGST 213 (369)
Q Consensus 200 ~~--~~~~v~~~~~~~ 213 (369)
++ +..+++-+++..
T Consensus 82 ~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 82 DGVSGADVLINNAGIM 97 (291)
T ss_dssp HTCCCEEEEEECCCCC
T ss_pred HhcCCCCEEEECCcCC
Confidence 65 345666666643
No 262
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=27.00 E-value=2.3e+02 Score=22.63 Aligned_cols=53 Identities=6% Similarity=-0.035 Sum_probs=31.1
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCCHHHH
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
+...++..|+++....+-+| |.++|++++.+ +..+|+.+.|+.+ |.-|-..+.
T Consensus 36 l~~~L~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVittGG~g~-g~~D~t~ea 93 (169)
T 1y5e_A 36 LHELLKEAGHKVTSYEIVKD----DKESIQQAVLAGYHKEDVDVVLTNGGTGI-TKRDVTIEA 93 (169)
T ss_dssp HHHHHHHHTCEEEEEEEECS----SHHHHHHHHHHHHTCTTCSEEEEECCCSS-STTCCHHHH
T ss_pred HHHHHHHCCCeEeEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEEcCCCCC-CCCCCcHHH
Confidence 44555667988877666555 45666665543 4456655555554 666555443
No 263
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=26.97 E-value=1.7e+02 Score=23.19 Aligned_cols=55 Identities=9% Similarity=-0.017 Sum_probs=32.4
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh-----cCcEEEEeeCCCCcccCCCHHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~I 224 (369)
+.+...++..|+++....+-+| |.+.+++++.+ +..+|+.+.|+.+ |..|-..+.
T Consensus 24 ~~l~~~l~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVittGG~g~-g~~D~t~ea 83 (164)
T 2is8_A 24 LAIREVLAGGPFEVAAYELVPD----EPPMIKKVLRLWADREGLDLILTNGGTGL-APRDRTPEA 83 (164)
T ss_dssp HHHHHHHTTSSEEEEEEEEECS----CHHHHHHHHHHHHHTSCCSEEEEESCCSS-STTCCHHHH
T ss_pred HHHHHHHHHCCCeEeEEEEcCC----CHHHHHHHHHHHHhcCCCCEEEEcCCCCC-CCCCChHHH
Confidence 3455666777988877665454 45556555543 3556655555544 666655443
No 264
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=26.58 E-value=1.8e+02 Score=26.52 Aligned_cols=52 Identities=15% Similarity=-0.035 Sum_probs=32.5
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++-
T Consensus 96 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~ 147 (364)
T 4h27_A 96 FVCSSSGNAGMAAAYAARQL---------G---VPATIVVPGTTPALTIERLKNEGATVKVVGE 147 (364)
T ss_dssp EEECCSSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHTTTCEEEEECS
T ss_pred EEEeCCChHHHHHHHHHHHh---------C---CceEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 44455666666555544322 1 1347888887655566677789999988863
No 265
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=26.49 E-value=95 Score=27.83 Aligned_cols=30 Identities=7% Similarity=-0.028 Sum_probs=23.0
Q ss_pred CeEEecCCC-cchHHHHHhhhcceeEEEecc
Q 017569 155 PNIVTGANV-QVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 155 ~~Vi~s~~~-h~s~~~~~~~~G~~v~~v~~~ 184 (369)
..|++|+.. -......++.+|++++.++-+
T Consensus 98 ~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~ 128 (325)
T 1j0a_A 98 AILVLRGKEELKGNYLLDKIMGIETRVYDAK 128 (325)
T ss_dssp EEEEEESCCCSCHHHHHHHHTTCEEEEESCC
T ss_pred EEEEECCCCCCCchHHHHHHCCCEEEEeCcc
Confidence 477888776 556677888899999888754
No 266
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=26.33 E-value=2.7e+02 Score=24.22 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=30.4
Q ss_pred eEEecCCCcchHHHHHhhhcceeEEEe-ccCCccccCHHHHHHHHh---h-cCcEEEEee
Q 017569 156 NIVTGANVQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAIL 210 (369)
Q Consensus 156 ~Vi~s~~~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~ 210 (369)
.+++ +|.++...++.+|++...+. +.++ ..+.+.+|.+.++ + +.++|+...
T Consensus 176 ~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~e~ 231 (284)
T 2prs_A 176 GYFV---FHDAYGYFEKQFGLTPLGHFTVNPE-IQPGAQRLHEIRTQLVEQKATCVFAEP 231 (284)
T ss_dssp CEEE---EESCCHHHHHHHTCCCCEEEESSTT-SCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred eEEE---ECccHHHHHHHCCCeEeEeeccCCC-CCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4554 36667777899999865543 3332 4666666666554 4 456665443
No 267
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=25.81 E-value=2e+02 Score=23.26 Aligned_cols=55 Identities=7% Similarity=-0.084 Sum_probs=33.1
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---c--CcEEEEeeCCCCcccCCCHHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---N--TICVAAILGSTLTGEFEDVKLL 224 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~--~~~v~~~~~~~~tG~~~~l~~I 224 (369)
+.+...++..|+++....+-+| |.+++++++.+ + ..+|+.+.| +..|..|-..+.
T Consensus 43 ~~L~~~l~~~G~~v~~~~iv~D----d~~~I~~al~~a~~~~~~DlVittGG-~s~g~~D~t~ea 102 (178)
T 2pjk_A 43 DIIKQLLIENGHKIIGYSLVPD----DKIKILKAFTDALSIDEVDVIISTGG-TGYSPTDITVET 102 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHTCTTCCEEEEESC-CSSSTTCCHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEECCC-CCCCCCcchHHH
Confidence 3455666778998877766555 46666666543 2 455554544 444776655543
No 268
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.35 E-value=1.5e+02 Score=23.49 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=48.0
Q ss_pred CCeEEe---cCCCcch----HHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHH
Q 017569 154 KPNIVT---GANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLH 225 (369)
Q Consensus 154 ~~~Vi~---s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (369)
+++|++ ....|.. +...++..|.+|+.+.. .+.++++.+++. .++.+|.++.-.+ .....+.++.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i 90 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLM 90 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHH
Confidence 355553 3345643 33344556877765543 346777777665 4677777666544 3456677777
Q ss_pred HHHHHhhhccCCCceEEeec
Q 017569 226 DLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 226 ~l~~~~~~~~~~~~~l~vD~ 245 (369)
+.+++... .++.+++=|
T Consensus 91 ~~L~~~g~---~~i~v~vGG 107 (161)
T 2yxb_A 91 AKLRELGA---DDIPVVLGG 107 (161)
T ss_dssp HHHHHTTC---TTSCEEEEE
T ss_pred HHHHhcCC---CCCEEEEeC
Confidence 77777510 046666654
No 269
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=25.28 E-value=3.1e+02 Score=23.10 Aligned_cols=83 Identities=7% Similarity=-0.134 Sum_probs=46.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++...........+..++..+..+.+|-. |.+++++.+
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~ 73 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVR-------E-----GATVAIADIDIERARQAAAEIGPAAYAVQMDVT----RQDSIDAAI 73 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCC----CHHHHHHHH
Confidence 355556666664444332221 1 345655544444555555566667777777643 456666655
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++....+.+
T Consensus 74 ~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 74 AATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp HHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCc
Confidence 43 45677777776554443
No 270
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.10 E-value=32 Score=32.62 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=28.7
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.....|..++++++++-|+++ |+.|++|.++..
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~NH 89 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAA------GVDIYVDTLINH 89 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHT------TCEEEEEEECSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEeecc
Confidence 356678999999999999999 999999998653
No 271
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=24.75 E-value=2e+02 Score=23.70 Aligned_cols=71 Identities=17% Similarity=0.004 Sum_probs=43.3
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHh-hcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeec
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~ 245 (369)
+...++..|.+++.+.. .+.++++.+++. .++.+|.++.-.++ ....+.++.+.+++... ..++.+++=|
T Consensus 108 va~~l~~~G~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~l~~~~~--~~~~~v~vGG 178 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTT--TMMNMKSTIDALIAAGL--RDRVKVIVGG 178 (210)
T ss_dssp HHHHHHHTTCEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGG--GTHHHHHHHHHHHHTTC--GGGCEEEEES
T ss_pred HHHHHHHCCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHhcCC--CCCCeEEEEC
Confidence 33444566888776543 356788877775 46777777664433 45667777777776510 0037777765
Q ss_pred c
Q 017569 246 A 246 (369)
Q Consensus 246 a 246 (369)
+
T Consensus 179 ~ 179 (210)
T 1y80_A 179 A 179 (210)
T ss_dssp T
T ss_pred C
Confidence 4
No 272
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=24.41 E-value=3.5e+02 Score=23.51 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=36.0
Q ss_pred eEEecCCCcchHHHHHhhhcceeEEEec-cCCccccCHHHHHHH---Hhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHH
Q 017569 156 NIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVEL---VDE-NTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (369)
Q Consensus 156 ~Vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~---i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~ 230 (369)
.++++ |.++...++.+|+++..+.- .++ ..+.+.+|.+. +++ +.++|+.....++ +.+-.++++
T Consensus 179 ~~v~~---H~af~Yf~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ia~~ 247 (284)
T 3cx3_A 179 TFVTQ---HTAFSYLAKRFGLNQLGIAGISPE-QEPSPRQLTEIQEFVKTYKVKTIFTESNASS-------KVAETLVKS 247 (284)
T ss_dssp CEEEE---ESCCHHHHHHTTCCEEEEECSSTT-CCCCSHHHHHHHHHHHHTTCCCEEECSSSCC-------HHHHHHHSS
T ss_pred EEEEE---CCchHHHHHHcCCEEeeccCCCCC-CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHHHHHHHH
Confidence 45543 56667778999999776542 222 35555555554 444 4566654433322 223345777
Q ss_pred h
Q 017569 231 K 231 (369)
Q Consensus 231 ~ 231 (369)
.
T Consensus 248 ~ 248 (284)
T 3cx3_A 248 T 248 (284)
T ss_dssp S
T ss_pred c
Confidence 7
No 273
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.35 E-value=2.1e+02 Score=24.22 Aligned_cols=58 Identities=7% Similarity=0.001 Sum_probs=28.3
Q ss_pred HHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHh
Q 017569 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (369)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~ 231 (369)
...++..|..+.....+.+ ..-..+.++..+..+...|++... .+ ....+..+.+++.
T Consensus 28 ~~~a~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiIi~~~-~~----~~~~~~~~~~~~~ 85 (291)
T 3l49_A 28 IAEIERLGGTAIALDAGRN-DQTQVSQIQTLIAQKPDAIIEQLG-NL----DVLNPWLQKINDA 85 (291)
T ss_dssp HHHHHHTTCEEEEEECTTC-HHHHHHHHHHHHHHCCSEEEEESS-CH----HHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEEcCCCC-HHHHHHHHHHHHHcCCCEEEEeCC-Ch----hhhHHHHHHHHHC
Confidence 3344555777766655432 111234455555666666664432 21 1234445555555
No 274
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.31 E-value=2.4e+02 Score=24.91 Aligned_cols=51 Identities=20% Similarity=0.015 Sum_probs=31.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEe
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++
T Consensus 57 vv~~ssGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~ 107 (318)
T 2rkb_A 57 LVCSSGGNAGIAAAYAARKL---------G---IPATIVLPESTSLQVVQRLQGEGAEVQLTG 107 (318)
T ss_dssp EEECCCSHHHHHHHHHHHHH---------T---CCEEEEECTTCCHHHHHHHHHTTCEEEECC
T ss_pred EEEECCchHHHHHHHHHHHc---------C---CCEEEEECCCCcHHHHHHHHhcCCEEEEEC
Confidence 44455666666655544322 1 134777887655555566788899988765
No 275
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=24.15 E-value=92 Score=27.77 Aligned_cols=53 Identities=19% Similarity=0.121 Sum_probs=34.8
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++-+
T Consensus 65 vv~~ssGN~g~a~A~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 65 IVDATSGNTGIALAYVAAAR---------G---YKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp EEESCCSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44555677777666555432 1 13478888776555667778899999888753
No 276
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.99 E-value=1.4e+02 Score=25.09 Aligned_cols=35 Identities=14% Similarity=-0.027 Sum_probs=29.4
Q ss_pred cCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE
Q 017569 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
.|..|+.-.-.+..|......++.+++++| ++.++
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h------~l~ii 193 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKH------GIKII 193 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHH------TCCEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHc------CCcEE
Confidence 577777666657889999999999999999 88776
No 277
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=23.87 E-value=85 Score=24.35 Aligned_cols=42 Identities=14% Similarity=0.002 Sum_probs=30.2
Q ss_pred HHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 195 AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 195 L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++++++...+.+++..+.. -+++.++|+++ ++.++-+.|.|.
T Consensus 87 ~~~~~~~gi~~i~~~~g~~-------~~~~~~~a~~~------Gir~vgpnc~g~ 128 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR-------HPEFEKALKEA------GIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC-------CHHHHHHHHHT------TCCEEESCCHHH
T ss_pred HHHHHHcCCCEEEEcCCcC-------HHHHHHHHHHc------CCEEEcCCccce
Confidence 4555555666666554332 38899999999 999999998874
No 278
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.30 E-value=3.4e+02 Score=23.03 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=34.1
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE-eec
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VDA 245 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~-vD~ 245 (369)
+...++..|..+..+.....+..--.+.++.++..+...|++...... ...+..+.+++. +++++ +|.
T Consensus 26 i~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~------~iPvV~~~~ 94 (305)
T 3g1w_A 26 FEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPV-----ELTDTINKAVDA------GIPIVLFDS 94 (305)
T ss_dssp HHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTT-----TTHHHHHHHHHT------TCCEEEESS
T ss_pred HHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHH-----HHHHHHHHHHHC------CCcEEEECC
Confidence 334555668877663322211222234455566667777765433221 334445555666 66554 454
No 279
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=23.04 E-value=1.1e+02 Score=27.38 Aligned_cols=53 Identities=9% Similarity=-0.101 Sum_probs=34.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++-+
T Consensus 77 vv~~ssGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 129 (323)
T 1v71_A 77 VLTFSSGNHAQAIALSAKIL---------G---IPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY 129 (323)
T ss_dssp EEECCSSHHHHHHHHHHHHT---------T---CCEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCCCcHHHHHHHHHHHc---------C---CCEEEECCCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45556677777666555422 1 13477888766555566778899999888754
No 280
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=22.98 E-value=1.1e+02 Score=27.77 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=35.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+... | -+..|++|...-..-...++.+|++++.++.+
T Consensus 81 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 81 IIESTSGNTGIALCQAGAVF---------G---YRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 55556677777666555432 1 13478888776555666778889999888753
No 281
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=22.59 E-value=3.2e+02 Score=22.38 Aligned_cols=60 Identities=8% Similarity=0.010 Sum_probs=35.9
Q ss_pred CeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh---cCcEEEEeeCCCCcccC
Q 017569 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEF 218 (369)
Q Consensus 155 ~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~ 218 (369)
..|++....-.........++..+..+.+|-. |.+++++.+++ ...+++-+++....+.+
T Consensus 26 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~ 88 (230)
T 3guy_A 26 KATYLTGRSESKLSTVTNCLSNNVGYRARDLA----SHQEVEQLFEQLDSIPSTVVHSAGSGYFGLL 88 (230)
T ss_dssp CCEEEEESCHHHHHHHHHTCSSCCCEEECCTT----CHHHHHHHHHSCSSCCSEEEECCCCCCCSCG
T ss_pred CEEEEEeCCHHHHHHHHHHHhhccCeEeecCC----CHHHHHHHHHHHhhcCCEEEEeCCcCCCCcc
Confidence 44555444444555666666667777777643 56777777654 23577777776655544
No 282
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=22.49 E-value=42 Score=32.10 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=28.1
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.....|+.++++++++-|+++ |+.|++|.++..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 103 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSR------NVQVYGDVVLNH 103 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 345568889999999999999 999999988653
No 283
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=22.35 E-value=3.3e+02 Score=22.52 Aligned_cols=83 Identities=6% Similarity=-0.112 Sum_probs=42.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++..-.-.........++..+..+.+|-. |.+++++.+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~ 68 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVE-------R-----GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA----HHEDVDVAF 68 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT----SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHhcCCceEEECCCC----CHHHHHHHH
Confidence 345557776665544433221 1 345555444434455555555556777777643 456665555
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
++ +..+++-+++....+.+
T Consensus 69 ~~~~~~~g~id~lvnnAg~~~~~~~ 93 (235)
T 3l6e_A 69 AAAVEWGGLPELVLHCAGTGEFGPV 93 (235)
T ss_dssp HHHHHHHCSCSEEEEECCCC-----
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCh
Confidence 43 35677777776555443
No 284
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=22.29 E-value=3.3e+02 Score=23.10 Aligned_cols=65 Identities=9% Similarity=-0.043 Sum_probs=34.8
Q ss_pred HHHHHhhhcceeEEEeccCCccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE-ee
Q 017569 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VD 244 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~-vD 244 (369)
+...++..|..+..+... + ..-..+.++..+..+...|++..... +......+.+++. +++++ +|
T Consensus 24 i~~~a~~~g~~~~~~~~~-~-~~~~~~~i~~l~~~~vdgiii~~~~~-----~~~~~~~~~~~~~------~iPvV~~~ 89 (306)
T 8abp_A 24 ADKAGKDLGFEVIKIAVP-D-GEKTLNAIDSLAASGAKGFVICTPDP-----KLGSAIVAKARGY------DMKVIAVD 89 (306)
T ss_dssp HHHHHHHHTEEEEEEECC-S-HHHHHHHHHHHHHTTCCEEEEECSCG-----GGHHHHHHHHHHT------TCEEEEES
T ss_pred HHHHHHHcCCEEEEeCCC-C-HHHHHHHHHHHHHcCCCEEEEeCCCc-----hhhHHHHHHHHHC------CCcEEEeC
Confidence 334555567777655542 1 22223456666666776766544322 1344555556666 77655 45
No 285
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=22.25 E-value=1.5e+02 Score=27.93 Aligned_cols=53 Identities=11% Similarity=0.000 Sum_probs=36.7
Q ss_pred CeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEec
Q 017569 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (369)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (369)
.++..++|..+...|..+.+. | -+..|++|...-..-...++.+|++|+.++-
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~---------G---~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~ 214 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARI---------G---FKVTVHMSADARAWKKAKLRSHGVTVVEYEQ 214 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHh---------C---CcEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 366777888888777776544 1 1247888887655556677889999877763
No 286
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=22.23 E-value=44 Score=31.95 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=28.0
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.....|+.++++++++-|+++ |+.|++|.++..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 105 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSN------DINVYGDVVMNH 105 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 345568889999999999999 999999988653
No 287
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=22.19 E-value=1.1e+02 Score=23.67 Aligned_cols=45 Identities=4% Similarity=-0.102 Sum_probs=31.6
Q ss_pred HHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 192 PVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.+.++++++...+.+++..+ .. -+++.+.|+++ |+.++-+.|.|.
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g-----~~--~~~l~~~a~~~------Gi~vvGpnc~gv 135 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYN-----TY--NREASKKADEA------GLIIVANRCMMR 135 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTT-----CC--CHHHHHHHHHT------TCEEEESCCHHH
T ss_pred HHHHHHHHHcCCCEEEECCC-----ch--HHHHHHHHHHc------CCEEEcCCchhh
Confidence 34455666666666665432 22 58899999999 999888888764
No 288
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=22.13 E-value=3.6e+02 Score=22.84 Aligned_cols=82 Identities=10% Similarity=0.035 Sum_probs=45.0
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+..+-.++.-.... . +..|++...............+..+..+.+|-. |.+.+++++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~~~~~~ 70 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVA-------A-----GDTVIGTARRTEALDDLVAAYPDRAEAISLDVT----DGERIDVVA 70 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHH-------T-----TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCC----CHHHHHHHH
Confidence 466667776665544332221 1 245655444444445555555666777777642 456666655
Q ss_pred hh------cCcEEEEeeCCCCccc
Q 017569 200 DE------NTICVAAILGSTLTGE 217 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~ 217 (369)
++ +..+|+-+++....+.
T Consensus 71 ~~~~~~~g~id~lv~~Ag~~~~~~ 94 (281)
T 3m1a_A 71 ADVLARYGRVDVLVNNAGRTQVGA 94 (281)
T ss_dssp HHHHHHHSCCSEEEECCCCEEECC
T ss_pred HHHHHhCCCCCEEEECCCcCCCCC
Confidence 43 4567777777655444
No 289
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=21.93 E-value=1.4e+02 Score=26.55 Aligned_cols=53 Identities=21% Similarity=0.070 Sum_probs=34.7
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++.+
T Consensus 70 vv~assGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 70 LIEPTSGNTGVGLAFTAAAK---------G---YKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44556677777666665433 1 12467888766555666778899999887743
No 290
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=21.77 E-value=45 Score=31.89 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=28.1
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
.....|+.++++++++-|+++ |+.|++|.++..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~------Gi~VilD~V~NH 107 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNN------GIQVYGDVVMNH 107 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEeccc
Confidence 345568889999999999999 999999988653
No 291
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=21.70 E-value=2.5e+02 Score=24.04 Aligned_cols=65 Identities=11% Similarity=-0.020 Sum_probs=32.2
Q ss_pred HHHHHhhhcceeEEEeccC-CccccCHHHHHHHHhhcCcEEEEeeCCCCcccCCCHHHHHHHHHHhhhccCCCceEE
Q 017569 167 WEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (369)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~ 242 (369)
+...++..|..+.....+. ++..-..+.++.++..+...|++... .. +.+....+.+++. +++++
T Consensus 25 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~-~~----~~~~~~~~~~~~~------giPvV 90 (297)
T 3rot_A 25 AKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIP-SD----TAFSKSLQRANKL------NIPVI 90 (297)
T ss_dssp HHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCC-CS----STTHHHHHHHHHH------TCCEE
T ss_pred HHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCC-CH----HHHHHHHHHHHHC------CCCEE
Confidence 3445555677776655431 11122234455556666666665332 22 1234455556666 66554
No 292
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=21.46 E-value=59 Score=27.95 Aligned_cols=62 Identities=6% Similarity=-0.114 Sum_probs=38.0
Q ss_pred CCCeEEecCCCcc--hHHHHHhhhcceeEEEeccCCccccCHHHHHHHHhh--cCcEEEEeeCCCC
Q 017569 153 DKPNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTL 214 (369)
Q Consensus 153 ~~~~Vi~s~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~ 214 (369)
.+.+|+++.+... .+...++..|+++..+|+-+-...-|.+.+++.+.+ +...|++++++..
T Consensus 5 ~g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~aV 70 (254)
T 4es6_A 5 SGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAA 70 (254)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHHHH
T ss_pred CCCEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHHHH
Confidence 3468999887654 466667778999888887421112233456665542 4567777776543
No 293
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=21.45 E-value=47 Score=31.37 Aligned_cols=32 Identities=16% Similarity=0.059 Sum_probs=27.6
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
++..|..++++++++-|+++ |+.|++|.++..
T Consensus 80 d~~~Gt~~df~~lv~~~H~~------Gi~VilD~V~NH 111 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAY------GIKVIADVVINH 111 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSB
T ss_pred CCCCCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 45568889999999999999 999999988653
No 294
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=21.43 E-value=2e+02 Score=23.60 Aligned_cols=54 Identities=9% Similarity=-0.017 Sum_probs=32.8
Q ss_pred chHHHHHhhhcceeEEEeccCCccccCHHHHHHHHh----hcCcEEEEeeCCCCcccCCCHHH
Q 017569 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDVKL 223 (369)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~l~~ 223 (369)
+.+...++..|+++....+-+| |.+.+++++. ++..+|+.+.|+.+ |..|-..+
T Consensus 52 ~~L~~~L~~~G~~v~~~~iv~D----d~~~I~~al~~a~~~~~DlVIttGGts~-g~~D~t~e 109 (185)
T 3rfq_A 52 PLVTELLTEAGFVVDGVVAVEA----DEVDIRNALNTAVIGGVDLVVSVGGTGV-TPRDVTPE 109 (185)
T ss_dssp HHHHHHHHHTTEEEEEEEEECS----CHHHHHHHHHHHHHTTCSEEEEESCCSS-STTCCHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhCCCCEEEECCCCCC-CCcccHHH
Confidence 4455666777998887766555 4566655554 34556655555444 77766554
No 295
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=21.27 E-value=47 Score=32.17 Aligned_cols=32 Identities=9% Similarity=-0.073 Sum_probs=27.7
Q ss_pred CCCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 212 ~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
..-.|..++++++++-|+++ |+.|++|.++..
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~NH 106 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAA------GMQVYADVVFDH 106 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred CCCCCCHHHHHHHHHHHHHC------CCEEEEEEecCC
Confidence 45568889999999999999 999999988653
No 296
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=21.22 E-value=3.6e+02 Score=22.52 Aligned_cols=81 Identities=10% Similarity=-0.031 Sum_probs=36.6
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++..............++.++..+.+|-. |.+++++.+
T Consensus 9 ~~lVTGas~gIG~aia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 72 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQ-------E-----GATVLGLDLKPPAGEEPAAELGAAVRFRNADVT----NEADATAAL 72 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-------T-----TCEEEEEESSCC------------CEEEECCTT----CHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------C-----CCEEEEEeCChHHHHHHHHHhCCceEEEEccCC----CHHHHHHHH
Confidence 455557776665544332221 1 245554433333444445555667777777643 456666655
Q ss_pred hh------cCcEEEEeeCCCCcc
Q 017569 200 DE------NTICVAAILGSTLTG 216 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG 216 (369)
++ +..+++-+++....+
T Consensus 73 ~~~~~~~g~id~lv~nAg~~~~~ 95 (257)
T 3tpc_A 73 AFAKQEFGHVHGLVNCAGTAPGE 95 (257)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHcCCCCEEEECCCCCCCC
Confidence 42 456777677655433
No 297
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=21.19 E-value=45 Score=31.44 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=26.8
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
.....|+.++++++++-|+++ |+.|++|.++.
T Consensus 62 idp~~Gt~~df~~lv~~aH~~------Gi~VilD~V~N 93 (441)
T 1lwj_A 62 FKAEYGSEREFKEMIEAFHDS------GIKVVLDLPIH 93 (441)
T ss_dssp ECTTTCCHHHHHHHHHHHHHT------TCEEEEEECTT
T ss_pred cCcccCCHHHHHHHHHHHHHC------CCEEEEEeCCC
Confidence 355568888999999999999 99999998764
No 298
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=21.12 E-value=3.8e+02 Score=22.71 Aligned_cols=78 Identities=13% Similarity=-0.029 Sum_probs=43.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++..............+|.++..+.+|-. |.+++++++
T Consensus 13 ~vlVTGas~gIG~aia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 76 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLAR-------A-----GARVVLADLPETDLAGAAASVGRGAVHHVVDLT----NEVSVRALI 76 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCC----CHHHHHHHH
Confidence 455557776665444332221 1 245555444444555666666777777777643 456666655
Q ss_pred hh------cCcEEEEeeCCC
Q 017569 200 DE------NTICVAAILGST 213 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~ 213 (369)
++ +..+++-+++..
T Consensus 77 ~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 77 DFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 43 456677666654
No 299
>2i9s_A MESD, mesoderm development candidate 2; ferredoxin-like-fold, chaperone; NMR {Mus musculus}
Probab=21.12 E-value=1e+02 Score=22.56 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=42.8
Q ss_pred CHHHHHHHHhh-cCcEEEEeeCCCCcccCCCHHHHHHHHHH--hhhccCC---------CceEEeecccccccccccCCC
Q 017569 191 NPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTK--KNEETGW---------DTPIHVDAASGGFIAPFLYPD 258 (369)
Q Consensus 191 d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~l~~~--~~~~~~~---------~~~l~vD~a~~~~~~~~~~~~ 258 (369)
||+.|.+.-.+ +|.+++++...+++- +..++|..+=.. +|.+-.. -++++-||.+..=+.
T Consensus 4 ~pe~llk~sKkGkt~M~FV~v~g~~s~--~e~d~it~~WqtsL~Nnhi~~~ry~Id~~r~ifm~~DG~~a~E~k------ 75 (97)
T 2i9s_A 4 KPESILKMTKKGKTLMMFVTVSGNPTE--KETEEITSLWQGSLFNANYDVQRFIVGSDRAIFMLRDGSYAWEIK------ 75 (97)
T ss_dssp SCHHHHHHHCSCCCEEEEEECCSSSSH--HHHHHHHHHHHHHHHHTTCSEECCEEETTEEEEEECSSSSHHHHH------
T ss_pred CHHHHHHhhcCCCceEEEEEecCCCCH--HHHHHHHHHHHHHHhhCCeeEEEEEEcCCEEEEEEcChHHHHHHH------
Confidence 57778777665 488887776655431 223333332221 0110000 255566666654333
Q ss_pred ccccccCCCCcEEEEcCccC
Q 017569 259 LEWDFRLPLVKSINVSGHKY 278 (369)
Q Consensus 259 ~~~~~~~~~~Dsi~~~~hK~ 278 (369)
.+.+.-+.|..+++++++|
T Consensus 76 -dFL~~Q~e~~~vtie~q~y 94 (97)
T 2i9s_A 76 -DFLVSQDRCAEVTLEGQMY 94 (97)
T ss_dssp -HHHHHHSSSCEEECSSSCC
T ss_pred -HHHhcCcceeEEEEccEEc
Confidence 2333455789999999988
No 300
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.02 E-value=44 Score=32.46 Aligned_cols=31 Identities=10% Similarity=0.040 Sum_probs=27.7
Q ss_pred CCcccCCCHHHHHHHHHHhhhccCCCceEEeeccccc
Q 017569 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (369)
Q Consensus 213 ~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~~ 249 (369)
...|..++++++++-||++ |+.|++|.++..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~------GI~VilD~V~NH 117 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGA------GVKVLYDVVPNH 117 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHT------TCEEEEEECCSB
T ss_pred CCCCCHHHHHHHHHHHHHC------CCEEEEEEeecC
Confidence 6678999999999999999 999999988654
No 301
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.01 E-value=3.7e+02 Score=22.55 Aligned_cols=83 Identities=8% Similarity=0.043 Sum_probs=45.4
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEeccCCccccCHHHHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (369)
.++.+||+.++=.++.-.... . +..|++............+.+|.++..+.+|-. |.+++++.+
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 73 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVE-------G-----GAEVLLTGRNESNIARIREEFGPRVHALRSDIA----DLNEIAVLG 73 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC----CHHHHHHHH
Confidence 455556666665444332221 1 345665554444555666666777888887743 455555554
Q ss_pred hh------cCcEEEEeeCCCCcccC
Q 017569 200 DE------NTICVAAILGSTLTGEF 218 (369)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (369)
+. +..+++-+++....+.+
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~ 98 (255)
T 4eso_A 74 AAAGQTLGAIDLLHINAGVSELEPF 98 (255)
T ss_dssp HHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCh
Confidence 32 34566666666554443
No 302
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=20.41 E-value=45 Score=31.79 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=27.4
Q ss_pred eCCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 210 ~~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
..+...|..++++++++-|+++ |+.|++|.++.
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~------Gi~VilD~V~N 121 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHER------GMYLMVDVVAN 121 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHT------TCEEEEEECCS
T ss_pred ccCccCCCHHHHHHHHHHHHHC------CCEEEEEECcc
Confidence 3456668888999999999999 99999998754
No 303
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=20.40 E-value=47 Score=32.06 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=26.7
Q ss_pred CCCCcccCCCHHHHHHHHHHhhhccCCCceEEeecccc
Q 017569 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (369)
Q Consensus 211 ~~~~tG~~~~l~~I~~l~~~~~~~~~~~~~l~vD~a~~ 248 (369)
+....|+.++++++++-|+++ |+.|+.|.++.
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~N 103 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEH------HIKIVMDLVVN 103 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHT------TCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHHHHC------CCEEEEEECcc
Confidence 455568888999999999999 99999998764
No 304
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.31 E-value=4.1e+02 Score=22.75 Aligned_cols=78 Identities=15% Similarity=0.019 Sum_probs=42.9
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---hhhcceeEEEeccCCccccCHHHHH
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAV 196 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (369)
..+.+||+.++=.++.-.... . +..|++.+..-....+.+ +..|.++..+.+|-. |.++++
T Consensus 9 valVTGas~GIG~aiA~~la~-------~-----Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt----~~~~v~ 72 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFAL-------N-----DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS----KKKDVE 72 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------c-----CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHH
Confidence 455567777775554433222 1 355665554433444333 335777888888753 556666
Q ss_pred HHHhh------cCcEEEEeeCCC
Q 017569 197 ELVDE------NTICVAAILGST 213 (369)
Q Consensus 197 ~~i~~------~~~~v~~~~~~~ 213 (369)
+.+++ +..+++-++|-.
T Consensus 73 ~~~~~~~~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 73 EFVRRTFETYSRIDVLCNNAGIM 95 (254)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCccc
Confidence 65543 345666666643
No 305
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=20.24 E-value=3.3e+02 Score=23.11 Aligned_cols=75 Identities=19% Similarity=0.201 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCC---cchHH
Q 017569 93 TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANV---QVCWE 168 (369)
Q Consensus 93 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~Vi~s~~~---h~s~~ 168 (369)
..++++.+.+++.+. |.+ ..++..|||..+..++.++.... |. .+. .+.++... .....
T Consensus 6 ~~~~~~~l~~~i~~~-~~~------~vvv~lSGGiDSs~~~~l~~~~~--------g~--~~v~av~~~~~~~~~~~~a~ 68 (257)
T 2e18_A 6 YDKVIERILEFIREK-GNN------GVVIGISGGVDSATVAYLATKAL--------GK--EKVLGLIMPYFENKDVEDAK 68 (257)
T ss_dssp HHHHHHHHHHHHHHH-CTT------CEEEECCSSHHHHHHHHHHHHHH--------CG--GGEEEEECCSSCSTHHHHHH
T ss_pred HHHHHHHHHHHHHHh-CCC------cEEEEecCCHHHHHHHHHHHHhc--------CC--CcEEEEEeCCCCchHHHHHH
Confidence 456777888889887 543 24788899999987766554321 10 011 12222211 11244
Q ss_pred HHHhhhcceeEEEecc
Q 017569 169 KFARYFEVELKEVKLE 184 (369)
Q Consensus 169 ~~~~~~G~~v~~v~~~ 184 (369)
..++.+|++.+.++++
T Consensus 69 ~~a~~lgi~~~~i~i~ 84 (257)
T 2e18_A 69 LVAEKLGIGYKVINIK 84 (257)
T ss_dssp HHHHHHTCEEEECCCH
T ss_pred HHHHHhCCCEEEEECh
Confidence 5667789887777654
No 306
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=20.19 E-value=1.7e+02 Score=25.77 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=34.8
Q ss_pred eEEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHhhhcceeEEEecc
Q 017569 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (369)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~Vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (369)
.+..++|..+..+|..+.+. | -+..|++|...-..-...++.+|++++.++.+
T Consensus 64 vv~~ssGN~g~a~A~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 64 LIEATSGNTGIALAMIAALK---------G---YRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 55556677777666555432 1 12467788765555667778899999888753
No 307
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=20.13 E-value=3.9e+02 Score=22.40 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=23.7
Q ss_pred cceeEEEeccCCccccCHHHHHHHHhh------cCcEEEEeeCCCCccc
Q 017569 175 EVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (369)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~ 217 (369)
|.++..+++|-. |.+++++++++ +..+++-+++....+.
T Consensus 56 ~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 100 (263)
T 3ai3_A 56 GVRVLEVAVDVA----TPEGVDAVVESVRSSFGGADILVNNAGTGSNET 100 (263)
T ss_dssp CCCEEEEECCTT----SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCC
T ss_pred CCceEEEEcCCC----CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 666777777643 56666666553 4567777776554443
Done!