Your job contains 1 sequence.
>017573
MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY
GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG
TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP
PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI
FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID
VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE
LPSNVADLL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017573
(369 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 1829 1.1e-188 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 1775 6.0e-183 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 1726 9.3e-178 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 1444 7.1e-148 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 1437 3.9e-147 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 1437 3.9e-147 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 1437 3.9e-147 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 1437 3.9e-147 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 1437 3.9e-147 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 1437 3.9e-147 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 1437 3.9e-147 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 1437 3.9e-147 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 1428 3.5e-146 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 1426 5.7e-146 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 1426 5.7e-146 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 1426 5.7e-146 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 1426 5.7e-146 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 1426 5.7e-146 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 1426 5.7e-146 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 1426 5.7e-146 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 1426 5.7e-146 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 1392 2.3e-142 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 1388 6.1e-142 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 1386 9.9e-142 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 1379 5.5e-141 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 1359 7.2e-139 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 1325 2.9e-135 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 1320 9.8e-135 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 1314 4.2e-134 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 1314 4.2e-134 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 1312 6.9e-134 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 1294 5.6e-132 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 1294 5.6e-132 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 1294 5.6e-132 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 1294 5.6e-132 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 1294 5.6e-132 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 1294 5.6e-132 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 1290 1.5e-131 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 1286 3.9e-131 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 1273 9.3e-130 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 1272 1.2e-129 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 1272 1.2e-129 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 1264 8.4e-129 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 1257 4.6e-128 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 1254 9.6e-128 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 1240 2.9e-126 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 1212 2.7e-123 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 1212 2.7e-123 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 1203 2.4e-122 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 1203 2.4e-122 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 1191 4.6e-121 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 1168 1.3e-118 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 1151 7.9e-117 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 1149 1.3e-116 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 1149 1.3e-116 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 1148 1.6e-116 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 1134 5.0e-115 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 1134 5.0e-115 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 1124 5.8e-114 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 1122 9.4e-114 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 1109 2.2e-112 1
UNIPROTKB|J3QS69 - symbol:EIF4A1 "Eukaryotic initiation f... 977 2.2e-98 1
UNIPROTKB|J3QL43 - symbol:EIF4A1 "Eukaryotic initiation f... 614 4.4e-88 2
UNIPROTKB|J3KTB5 - symbol:EIF4A1 "Eukaryotic initiation f... 875 1.4e-87 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 859 6.9e-86 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 835 2.4e-83 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 729 4.1e-72 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 729 4.1e-72 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 723 1.8e-71 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 713 2.1e-70 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 710 4.3e-70 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 704 1.8e-69 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 701 3.8e-69 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 699 6.3e-69 1
ASPGD|ASPL0000065093 - symbol:AN7659 species:162425 "Emer... 696 1.3e-68 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 696 1.3e-68 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 696 1.3e-68 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 696 1.3e-68 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 696 1.3e-68 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 696 1.3e-68 1
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 696 1.3e-68 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 696 1.3e-68 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 696 1.3e-68 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 692 3.5e-68 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 692 3.5e-68 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 689 7.2e-68 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 687 1.2e-67 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 679 8.2e-67 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 678 1.1e-66 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 678 1.1e-66 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 676 1.7e-66 1
POMBASE|SPBC12C2.06 - symbol:SPBC12C2.06 "cytoplasmic ATP... 670 7.4e-66 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 668 1.2e-65 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 668 1.2e-65 1
ZFIN|ZDB-GENE-070912-83 - symbol:ddx6 "DEAD (Asp-Glu-Ala-... 665 2.5e-65 1
WARNING: Descriptions of 855 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 1829 (648.9 bits), Expect = 1.1e-188, P = 1.1e-188
Identities = 356/369 (96%), Positives = 364/369 (98%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDY 103
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L+QCQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVG
Sbjct: 104 ALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVG 163
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMP
Sbjct: 164 TPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMP 223
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
PEALEITRKFM+KPVRILVKRDELTLEGIKQFYVNVEKE+WKLETLCDLYETLAITQSVI
Sbjct: 224 PEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVI 283
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID
Sbjct: 284 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 343
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVT DD+RMLFDIQKFYNVV+EE
Sbjct: 344 VQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEE 403
Query: 361 LPSNVADLL 369
LPSNVADLL
Sbjct: 404 LPSNVADLL 412
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 1775 (629.9 bits), Expect = 6.0e-183, P = 6.0e-183
Identities = 345/369 (93%), Positives = 359/369 (97%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M LQ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD
Sbjct: 46 MELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDI 105
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
LVQCQALVLAPTRELAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVHVVVG
Sbjct: 106 SLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVG 165
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFD+LRRQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLLP+KVQVGVFSATMP
Sbjct: 166 TPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMP 225
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAITQSVI
Sbjct: 226 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVI 285
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID
Sbjct: 286 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 345
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF+T +DERM+ DIQ+FYNVV+EE
Sbjct: 346 VQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEE 405
Query: 361 LPSNVADLL 369
LPSNVADLL
Sbjct: 406 LPSNVADLL 414
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 1726 (612.6 bits), Expect = 9.3e-178, P = 9.3e-178
Identities = 336/347 (96%), Positives = 343/347 (98%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDF 103
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG
Sbjct: 104 SLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 163
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDML+RQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMP
Sbjct: 164 TPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMP 223
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
PEALEITRKFM+KPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI
Sbjct: 224 PEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 283
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID
Sbjct: 284 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 343
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 347
VQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML
Sbjct: 344 VQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 278/370 (75%), Positives = 319/370 (86%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
L + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 DLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM +P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 397
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 398 EMPMNVADLI 407
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 277/370 (74%), Positives = 317/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 39 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 98
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 99 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 158
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 159 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 218
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 219 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 278
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 279 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 338
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 339 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 398
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 399 EMPMNVADLI 408
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 279/370 (75%), Positives = 316/370 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 42 MNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 101
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 102 EQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQKLQAEAPHIVV 161
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 162 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATM 221
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T KFM +PVRILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 222 PADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 281
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RDIIMREFRSGSSRVLITTDLLARGI
Sbjct: 282 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGI 341
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +E
Sbjct: 342 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVE 401
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 402 EMPMNVADLI 411
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 278/370 (75%), Positives = 312/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ+D
Sbjct: 37 MNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDV 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
L QA+VLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR D + LQA V H+VV
Sbjct: 97 ELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQKLQADVPHIVV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMF LDEADEMLSRGFKDQIY+IFQ L QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLATDTQVILLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P E LE+T KFM PVRILVK++ELTLEGI+QFY+NVEKEEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN +T DD+R L DI+ FYN +E
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTLRDIETFYNTTVE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPMNVADLI 406
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 276/370 (74%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 337 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 396
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 397 EMPLNVADLI 406
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 278/370 (75%), Positives = 313/370 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ+D
Sbjct: 60 MNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDI 119
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 120 ELKGTQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEVQKLQAEAPHIVV 179
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRV+DML R+ L YIKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 180 GTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQVVLLSATM 239
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P E L++T KFM +PVRILVK++ELTLEGI+QFY+NVEKEEWKL+TLCDLYETL ITQ+V
Sbjct: 240 PAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAV 299
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 300 IFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGI 359
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT DD+R L DI+ FYN +E
Sbjct: 360 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVE 419
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 420 EMPMNVADLI 429
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 268/369 (72%), Positives = 312/369 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ++D
Sbjct: 28 MNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDT 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ QCQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G VVVG
Sbjct: 88 NVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVG 147
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQLLP QV + SATMP
Sbjct: 148 TPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMP 207
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFM PVRILVK+DELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VI
Sbjct: 208 QDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVI 267
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGID
Sbjct: 268 FCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGID 327
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE
Sbjct: 328 VQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEE 387
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 388 MPMNVADLI 396
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
Identities = 265/369 (71%), Positives = 310/369 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+ LLRGIYAYGFE+PSAIQQR I+P DV+ QAQSGTGKTATF +LQ++D
Sbjct: 24 MNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDT 83
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L QCQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT VR+D LQAGVHVVVG
Sbjct: 84 SLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVG 143
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM++R++L D ++MFVLDEADEMLSRGFKDQIYDIFQLLP QV + SATMP
Sbjct: 144 TPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMP 203
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFM P+RILVK+DELTLEGIKQFYV VEKEEWKL+TLCDLYET+ +TQ+VI
Sbjct: 204 QDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVI 263
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLT+++ RD TVS+ HGDMDQ RD +M EFR+GSSR+LITTDLLARGID
Sbjct: 264 FCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGID 323
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGV+INFVT DD RM+ +I++FYN IEE
Sbjct: 324 VQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEE 383
Query: 361 LPSNVADLL 369
+P N+ADL+
Sbjct: 384 MPMNIADLI 392
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 272/370 (73%), Positives = 307/370 (82%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RI LTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRIX-----LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 271
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 272 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 331
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L DI+ FYN IE
Sbjct: 332 DVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIE 391
Query: 360 ELPSNVADLL 369
E+P NVADL+
Sbjct: 392 EMPLNVADLI 401
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 263/369 (71%), Positives = 314/369 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTATF ILQQ+D
Sbjct: 35 MNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDT 94
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ +CQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRED RIL++G HVVVG
Sbjct: 95 SIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVG 154
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV+DM+ R+ LR YIK+FVLDEADEMLSRGFKDQI D+F++LP VQV + SATMP
Sbjct: 155 TPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMP 214
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
P+ LE++R FM PV ILVK++ELTLEGIKQFYVNV++E WKL TLCDLY+TL+ITQSVI
Sbjct: 215 PDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVI 274
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVD LT +M + TVSA HGDM+Q R++IM++FRSGSSRVLITTDLLARGID
Sbjct: 275 FCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGID 334
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINF+T DD R+L DI++FY+ IEE
Sbjct: 335 VQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEE 394
Query: 361 LPSNVADLL 369
+P+N+ADL+
Sbjct: 395 MPANIADLI 403
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
Identities = 259/369 (70%), Positives = 308/369 (83%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD
Sbjct: 30 MELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDP 89
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+ G +VVG
Sbjct: 90 NVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVG 149
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ DM++R+ L+ D +KMF+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP
Sbjct: 150 TPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMP 209
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFM PVRILVK+ ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VI
Sbjct: 210 QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVI 269
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGID
Sbjct: 270 FCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGID 329
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE
Sbjct: 330 VQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEE 389
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 390 MPMNVADLI 398
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 256/348 (73%), Positives = 293/348 (84%)
Query: 23 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 82
+QR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+K
Sbjct: 76 RQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 83 VMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKM 141
V+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YIKM
Sbjct: 136 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 195
Query: 142 FVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKR 201
FVLDEADEMLSRGFKDQIYDIFQ L + QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 196 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 255
Query: 202 DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 261
+ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 256 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 315
Query: 262 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 321
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+H
Sbjct: 316 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 375
Query: 322 RIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 369
RIGR GRFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 376 RIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 423
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
Identities = 255/369 (69%), Positives = 301/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTATF ILQ++D+
Sbjct: 34 MELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDH 93
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+DQR L+AG+HVVVG
Sbjct: 94 EDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVG 153
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+ R +L IKMFVLDEADEMLSRGFKDQIY++F+ +P VQV + SATMP
Sbjct: 154 TPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMP 213
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E L++T +FM P+RILVK+DELTLEGI+QFY+NV+K+EWK + LCDLY + +TQ+VI
Sbjct: 214 SEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVI 273
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVD LT+KM TVS HGDMDQ RD IMREFRSGSSRVLITTD+LARGID
Sbjct: 274 FCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGID 333
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R L +I+ +Y IEE
Sbjct: 334 VQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEE 393
Query: 361 LPSNVADLL 369
+P ++ADL+
Sbjct: 394 MPESIADLI 402
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 259/371 (69%), Positives = 300/371 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF LQ ++Y
Sbjct: 28 LGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFVISSLQLINY 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
V CQAL+LAPTRELAQQI+KV+ ALGDYL VK HACVGGT VRED L+ GVH+VVG
Sbjct: 88 DYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLKQGVHMVVG 147
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV+DM+ ++ L D +K+F+LDEADEMLSRGFK QIY++F+ L +QV +FSATMP
Sbjct: 148 TPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQVALFSATMP 207
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T +FM P ILVK+DELTLEGI+QFYV VEKEEWKL+TLCDLYETL ITQS+I
Sbjct: 208 QEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSII 267
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+TTDLLARGID
Sbjct: 268 YCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGID 327
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM--LFDIQKFYNVVI 358
VQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD+ L I+ +Y+ I
Sbjct: 328 VQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQI 387
Query: 359 EELPSNVADLL 369
EE+P VAD L
Sbjct: 388 EEMPLEVADYL 398
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 259/371 (69%), Positives = 300/371 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF LQ ++Y
Sbjct: 28 LGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFVISSLQLINY 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
V CQAL+LAPTRELAQQI+KV+ ALGDYL VK HACVGGT VRED L+ GVH+VVG
Sbjct: 88 DYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLKQGVHMVVG 147
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV+DM+ ++ L D +K+F+LDEADEMLSRGFK QIY++F+ L +QV +FSATMP
Sbjct: 148 TPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQVALFSATMP 207
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T +FM P ILVK+DELTLEGI+QFYV VEKEEWKL+TLCDLYETL ITQS+I
Sbjct: 208 QEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSII 267
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+TTDLLARGID
Sbjct: 268 YCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGID 327
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM--LFDIQKFYNVVI 358
VQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD+ L I+ +Y+ I
Sbjct: 328 VQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQI 387
Query: 359 EELPSNVADLL 369
EE+P VAD L
Sbjct: 388 EEMPLEVADYL 398
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
Identities = 253/369 (68%), Positives = 304/369 (82%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD
Sbjct: 38 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 98 QVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 157
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 158 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLP 217
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 218 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 277
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 278 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 337
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 338 VSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 397
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 398 MPMNVADLI 406
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 44 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 103
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 104 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 163
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 283
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 284 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 343
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 344 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 403
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 404 MPMNVADLI 412
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 251/369 (68%), Positives = 302/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 249/369 (67%), Positives = 300/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGTGKTATF LQ +D
Sbjct: 30 MHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDT 89
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ ED R L G HVV G
Sbjct: 90 VVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSG 149
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+RR+ LR +IKM VLDEADE+L+RGF++QIYD+++ LP QV V SAT+P
Sbjct: 150 TPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLP 209
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ L++T KFM PVR+LVKRDELTLEGIKQ+++ VEKEEWK +TLCDLY+TL ITQ+VI
Sbjct: 210 YDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVI 269
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGID
Sbjct: 270 FCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGID 329
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R+L DI+ +Y+ I+E
Sbjct: 330 VQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDE 389
Query: 361 LPSNVADLL 369
+P NVADLL
Sbjct: 390 MPMNVADLL 398
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 252/369 (68%), Positives = 297/369 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIYAYGFEKPSAIQQR I P KG DVI QAQSGTGKTATF ILQ LD
Sbjct: 31 MNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDT 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L + Q L L+PTRELA QI+KV+ ALGD + V+ H C+GGT++ ED R L G H+V G
Sbjct: 91 TLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSG 150
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM++R+ LR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 151 TPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 210
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 270
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q RD IM+EFR+G SRVLITTD+ ARGID
Sbjct: 271 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGID 330
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 331 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDE 390
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 391 MPVNVADLI 399
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 244/369 (66%), Positives = 303/369 (82%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I K DVI QAQSGTGKTATF +LQ LD
Sbjct: 31 MGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDT 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+L+PTRELA QI+KV+ ALGDY+ V+ HAC+GGT++ ED R L G HVV G
Sbjct: 91 QVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 150
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR++LR IK+ VLDEADEML++GFK+Q+YDI++ LP QV + SAT+P
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V V++EEWK +TL DLY+TL ITQ+V+
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVL 270
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLTDKM+ + TVS+ HGDM+Q RD +M+EFR+G++RVLI+TD+ ARG+D
Sbjct: 271 FCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R+L DI+++Y+ I+E
Sbjct: 331 VPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDE 390
Query: 361 LPSNVADLL 369
+P N+AD++
Sbjct: 391 MPMNIADII 399
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 240/369 (65%), Positives = 299/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYG+E PSA+Q R I+ CKG DVI QAQSGTGKTATF GILQ +D
Sbjct: 26 MNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDL 85
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ QAL+L+PTRELA QI+ V+ ALGD++ V+ HAC+GGTSV D + L G HVV G
Sbjct: 86 SVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSG 145
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+RR++LR +KM +LDEADE+L++GFK+QIYDI++ LP QV V SAT+P
Sbjct: 146 TPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLP 205
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KF PVRILVKRDELTLEG+KQ+++ VEKEEWK +TLCDLY+TL ITQ+VI
Sbjct: 206 QDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVI 265
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F N+RRKVDWLT+KMR + TV++ HG+M Q RD IM++FR G+SRVLI TD+ ARGID
Sbjct: 266 FCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGID 325
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+++Y+ VI+E
Sbjct: 326 VQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDE 385
Query: 361 LPSNVADLL 369
+P N+ D++
Sbjct: 386 MPMNIGDMV 394
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 243/369 (65%), Positives = 303/369 (82%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR + K DVI QAQSGTGKTATF +LQ LD
Sbjct: 31 MGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDT 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+L+PTRELA QI+KV+ ALGDY+ V+ HAC+GGT++ ED R L G HVV G
Sbjct: 91 QVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 150
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR++LR IK+ VLDEADEML++GFK+Q+YDI++ LP QV + SAT+P
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V V++EEWK +TL DLY+TL ITQ+V+
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVL 270
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLTDKM+ + TVS+ HGDM+Q RD +M+EFR+G++RVLI+TD+ ARG+D
Sbjct: 271 FCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R+L DI+++Y+ I+E
Sbjct: 331 VPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDE 390
Query: 361 LPSNVADLL 369
+P N+AD++
Sbjct: 391 MPMNIADII 399
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 246/369 (66%), Positives = 297/369 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L ++LLRGIY+YGFEKPSAIQQR I+P KG D+I QAQSGTGKTATF GIL ++D
Sbjct: 29 MELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQSGTGKTATFTVGILSRIDI 88
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+++CQAL++APTRELAQQI+KV+ ALG+YL +K +AC+GGT + +D + LQ+GVHVVVG
Sbjct: 89 SVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKITDDIQALQSGVHVVVG 148
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVF+ML R + D I++F LDEADEMLSRGFKDQIY+IF+ LP +QVG+FSATM
Sbjct: 149 TPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGLFSATMT 208
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E L IT KFM PV ILVK+DELTLEGI+QFYVNV E+ K E L DLYETL+ITQSVI
Sbjct: 209 DETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYETLSITQSVI 268
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKVDWLT KM + TVS+THGD Q RD I++ FRSG++RVLITTDLLARGID
Sbjct: 269 FCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGATRVLITTDLLARGID 326
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVIN+DLPT ENY+HRIGRSGRFGRKGVAINF+T + + ++ + YN I E
Sbjct: 327 VQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHYNTYIAE 386
Query: 361 LPSNVADLL 369
+P ++ L
Sbjct: 387 MPQDIGSFL 395
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 1257 (447.5 bits), Expect = 4.6e-128, P = 4.6e-128
Identities = 244/323 (75%), Positives = 277/323 (85%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+
Sbjct: 38 MNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEI 97
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVV 119
+ QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VV
Sbjct: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATM
Sbjct: 158 GTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGI
Sbjct: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
Query: 300 DVQQVSLVINYDLPTQPENYLHR 322
DVQQVSLVINYDLPT ENY+HR
Sbjct: 338 DVQQVSLVINYDLPTNRENYIHR 360
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
Identities = 241/369 (65%), Positives = 299/369 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ + Q +D
Sbjct: 40 MGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDT 99
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L+ GVHVV G
Sbjct: 100 SSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSG 159
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM++R+SLR IK+ +LDE+DEMLSRGFKDQIYD+++ LP +QV + SAT+P
Sbjct: 160 TPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLP 219
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM +PV+ILVKRDELTLEGIKQF+V VEKEEWK +TLCDLY+TL ITQ+VI
Sbjct: 220 HEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVI 279
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVD+L++KMRS + TVS+ HGDM Q RD IM EFRSG SRVLITTD+ ARGID
Sbjct: 280 FCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGID 339
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E
Sbjct: 340 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDE 399
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 400 MPMNVADLI 408
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 241/369 (65%), Positives = 296/369 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYG +P A QQR I+ K + + +QSGTGKTATF +LQ LD
Sbjct: 43 MGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQSGTGKTATFSISVLQCLDI 102
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV G
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 361 LPSNVADLL 369
+P NVADL+
Sbjct: 403 MPMNVADLI 411
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 240/369 (65%), Positives = 292/369 (79%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D
Sbjct: 27 MELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDT 86
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L+ +VVG
Sbjct: 87 SVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR-DAQIVVG 145
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFD ++R+ R D IKMF+LDEADEMLS GFK+QIY IF LLP QV + SATMP
Sbjct: 146 TPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMP 205
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFM PVRILVK+DELTLEGIKQFYVNVE+EE+K E L DLY+++++TQ+VI
Sbjct: 206 NDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVI 265
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGID
Sbjct: 266 FCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGID 325
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEE
Sbjct: 326 VQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEE 385
Query: 361 LPSNVADLL 369
LPS++A LL
Sbjct: 386 LPSDIATLL 394
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 240/369 (65%), Positives = 292/369 (79%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D
Sbjct: 27 MELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDT 86
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L+ +VVG
Sbjct: 87 SVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR-DAQIVVG 145
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRVFD ++R+ R D IKMF+LDEADEMLS GFK+QIY IF LLP QV + SATMP
Sbjct: 146 TPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMP 205
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFM PVRILVK+DELTLEGIKQFYVNVE+EE+K E L DLY+++++TQ+VI
Sbjct: 206 NDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVI 265
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGID
Sbjct: 266 FCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGID 325
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEE
Sbjct: 326 VQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEE 385
Query: 361 LPSNVADLL 369
LPS++A LL
Sbjct: 386 LPSDIATLL 394
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 230/368 (62%), Positives = 293/368 (79%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ+++
Sbjct: 28 LNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINE 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D ++GV +VVG
Sbjct: 88 NEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVG 147
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+ R+ + D +KMF+LDEADEMLS GFK+QIY+IF+LLP Q+ + SATMP
Sbjct: 148 TPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLLSATMP 207
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFMN PVRILVK+DELTLEGIKQFY+NVE E++K + LCDLY+++++TQ+VI
Sbjct: 208 QDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVI 267
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGID
Sbjct: 268 FCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGID 327
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE
Sbjct: 328 VQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEE 387
Query: 361 LPSNVADL 368
+P+++ L
Sbjct: 388 MPADIGAL 395
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 230/368 (62%), Positives = 293/368 (79%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ+++
Sbjct: 28 LNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINE 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D ++GV +VVG
Sbjct: 88 NEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVG 147
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+ R+ + D +KMF+LDEADEMLS GFK+QIY+IF+LLP Q+ + SATMP
Sbjct: 148 TPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLLSATMP 207
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ LE+T KFMN PVRILVK+DELTLEGIKQFY+NVE E++K + LCDLY+++++TQ+VI
Sbjct: 208 QDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVI 267
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGID
Sbjct: 268 FCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGID 327
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE
Sbjct: 328 VQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEE 387
Query: 361 LPSNVADL 368
+P+++ L
Sbjct: 388 MPADIGAL 395
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 228/369 (61%), Positives = 292/369 (79%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E LLRGI+ YGFEKPSAIQQR I+P KG D I QAQSGTGKTATF G LQ ++
Sbjct: 37 MGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQCVEV 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ Q L+L+PTRELAQQI+KV AL +++ ++VHACVGG ++ +D + L+ GVH+V G
Sbjct: 97 NVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVHIVSG 156
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV DM+ R+SL +IKM +LDEADEMLS GF+ QI D+++ LP Q+ + SAT+
Sbjct: 157 TPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLT 216
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ + +T KFM KPVRIL+KRDELTL+GIKQF+V+VEKE+WK TLCD+Y++L ITQ+VI
Sbjct: 217 QDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVI 276
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT++KVD LT++MR + TV++ HGDM Q R+ I++ FRSG +RVLITTD+LARGID
Sbjct: 277 FCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGID 336
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFV D R+L DI++FY+ I+E
Sbjct: 337 VQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDE 396
Query: 361 LPSNVADLL 369
+P N A ++
Sbjct: 397 MPVNFASII 405
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 219/369 (59%), Positives = 287/369 (77%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D
Sbjct: 31 MNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDT 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V ED + LQ G +V G
Sbjct: 91 KSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQGQQIVSG 150
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV D+++R++L+ IK+ +LDEADE+ ++GFK+QIY+I++ LP VQV V SAT+P
Sbjct: 151 TPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLP 210
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KF PV+ILVKRDE++L GIKQ+YV E+E+WK +TLCDLY+ L ITQ+VI
Sbjct: 211 REVLEMTSKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTLCDLYDNLTITQAVI 270
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+ KV+WL D+M+ ++ TV A HGDM Q+ RD IM +FR G+SRVLI+TD+ ARGID
Sbjct: 271 FCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGID 330
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQQVSLVINYDLPT ENY+HRIGRSGRFGRKG AIN +T+DD L + +K+Y+ I+E
Sbjct: 331 VQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKE 390
Query: 361 LPSNVADLL 369
+P N+ D++
Sbjct: 391 MPMNINDIM 399
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 221/301 (73%), Positives = 258/301 (85%)
Query: 73 TREL---AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDM 128
+REL A +I+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDM
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 129 LRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITR 188
L R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATMP + LE+T+
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 189 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKV 248
KFM P+RILVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKV
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 249 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 308
DWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVI
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 251
Query: 309 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 368
NYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +EE+P NVADL
Sbjct: 252 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADL 311
Query: 369 L 369
+
Sbjct: 312 I 312
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 217/369 (58%), Positives = 280/369 (75%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F G L ++
Sbjct: 22 IGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALNCVNR 81
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L + Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L GVHV+ G
Sbjct: 82 NLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNNGVHVISG 141
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR++ ML + L+ YIK V+DEADEML++GFK+Q+YDI++ L Q+ + SAT+P
Sbjct: 142 TPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQIILSSATLP 201
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LEIT KFM+KPV+ILVKRDELTLEGIKQF+V++EKE+WK ETL DLYE+L ITQ+V+
Sbjct: 202 QEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVV 261
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+ KVDWLT KM + TV H M Q+ RD IM +FR RVLI+TD+ RG+D
Sbjct: 262 FCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLD 321
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E
Sbjct: 322 VQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDE 381
Query: 361 LPSNVADLL 369
+P N+ +LL
Sbjct: 382 MPMNITELL 390
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 217/369 (58%), Positives = 280/369 (75%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F G L ++
Sbjct: 22 IGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALNCVNR 81
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
L + Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L GVHV+ G
Sbjct: 82 NLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNNGVHVISG 141
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR++ ML + L+ YIK V+DEADEML++GFK+Q+YDI++ L Q+ + SAT+P
Sbjct: 142 TPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQIILSSATLP 201
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LEIT KFM+KPV+ILVKRDELTLEGIKQF+V++EKE+WK ETL DLYE+L ITQ+V+
Sbjct: 202 QEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVV 261
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+ KVDWLT KM + TV H M Q+ RD IM +FR RVLI+TD+ RG+D
Sbjct: 262 FCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLD 321
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E
Sbjct: 322 VQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDE 381
Query: 361 LPSNVADLL 369
+P N+ +LL
Sbjct: 382 MPMNITELL 390
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 217/292 (74%), Positives = 253/292 (86%)
Query: 79 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSLRPD 137
+I+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P
Sbjct: 21 KIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPK 80
Query: 138 YIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRI 197
+IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV + SATMP + LE+T+KFM P+RI
Sbjct: 81 WIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI 140
Query: 198 LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS 257
LVK++ELTLEGIKQFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +
Sbjct: 141 LVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 200
Query: 258 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE 317
RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT E
Sbjct: 201 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 260
Query: 318 NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 369
NY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 261 NYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 312
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 232/373 (62%), Positives = 286/373 (76%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 45 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 104
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK-VHACVGGTSVREDQRILQAGVHV-- 117
+ + QAL+LAPTRELA QI+KV + + +K +H +G D L AG V
Sbjct: 105 QVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVD---LPAGHEVAR 161
Query: 118 -VVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
+ G ++ M+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + S
Sbjct: 162 CISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 221
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT+P E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL IT
Sbjct: 222 ATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 281
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ A
Sbjct: 282 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 341
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+
Sbjct: 342 RGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYST 401
Query: 357 VIEELPSNVADLL 369
I+E+P NVADL+
Sbjct: 402 QIDEMPMNVADLI 414
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 220/298 (73%), Positives = 251/298 (84%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
IF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLL R
Sbjct: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 221/371 (59%), Positives = 280/371 (75%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D
Sbjct: 28 MNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDL 87
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVV 119
QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D + +Q G V
Sbjct: 88 RKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVS 147
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR--GFKDQIYDIFQLLPAKVQVGVFSA 177
GTPGRV DM+++Q L+ ++M VLDEADE+LS GFK QIYDIF LP QV V SA
Sbjct: 148 GTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSA 207
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
TM + LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+Y++L ITQ
Sbjct: 208 TMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQ 267
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ AR
Sbjct: 268 CVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWAR 327
Query: 298 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 357
GIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +I+KFY++
Sbjct: 328 GIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIK 387
Query: 358 IEELPSNVADL 368
I +P+N A+L
Sbjct: 388 INPMPANFAEL 398
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 213/365 (58%), Positives = 276/365 (75%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ + Q ++
Sbjct: 27 MGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNI 86
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH V G
Sbjct: 87 SSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSG 146
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGRV+DM++R SL+ +K+ VLDE+DEMLS+G KDQIYD+++ LP +QV + SAT+P
Sbjct: 147 TPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLISATLP 206
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM PVRILVK DELTLEGIKQ+YV+V+KEEWK +TLCDLY L I Q++I
Sbjct: 207 QEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAII 266
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTR+KVDWLT+KMRS + VS+ HGD Q RD IM +FRS SRVLI +D+ ARGID
Sbjct: 267 FCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGID 326
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
VQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y I E
Sbjct: 327 VQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIRE 386
Query: 361 LPSNV 365
+P+++
Sbjct: 387 MPADL 391
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 227/364 (62%), Positives = 279/364 (76%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD
Sbjct: 44 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 103
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QAL+LAPTRELA QI+K + A G+ V V V T +Q L + + +
Sbjct: 104 QVRETQALILAPTRELAVQIQKSLLATGE---VPVPPPVKCTVSSWEQCRLACFLSLFI- 159
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
+ DM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P
Sbjct: 160 LQSEI-DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 218
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VI
Sbjct: 219 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 278
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+D
Sbjct: 279 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 338
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
V QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E
Sbjct: 339 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 398
Query: 361 LPSN 364
+P N
Sbjct: 399 MPMN 402
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 191/265 (72%), Positives = 220/265 (83%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQ KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQ--KVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 154
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 155 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 214
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+V
Sbjct: 215 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 274
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSA 264
IF+NTRRKVDWLT+KM +RD TVSA
Sbjct: 275 IFINTRRKVDWLTEKMHARDFTVSA 299
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 614 (221.2 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 123/172 (71%), Positives = 138/172 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 37 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 96
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 97 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 156
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQ 171
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + Q
Sbjct: 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Score = 285 (105.4 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 51/64 (79%), Positives = 61/64 (95%)
Query: 201 RDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 260
++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD
Sbjct: 208 QEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF 267
Query: 261 TVSA 264
TVSA
Sbjct: 268 TVSA 271
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 170/237 (71%), Positives = 196/237 (82%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 21 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 80
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 81 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 140
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV + SATM
Sbjct: 141 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 200
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
P + LE+T+KFM P+RILVK++ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL IT
Sbjct: 201 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT 257
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 177/369 (47%), Positives = 250/369 (67%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L+E LLRGIY +GFEKPSAIQ+ + P G DV Q+Q+G+GKT ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q ++LAP R +AQ+ + +++LG L V C+G + E+ +I HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAENDKIS----HVLMG 115
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TP + + R IKMFVLDEADEMLS+GFKDQIY++F+ +P VQV + SATMP
Sbjct: 116 TPKDFLSNIPSDTSR---IKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
E L++T +FM P+RILVK+DELTLEGI+QFY+NV+K+EWK LCDL +T TQ++I
Sbjct: 173 SEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALI 232
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NTRR+V LT+++ S VS HG+M+ N R+ ++++F S ++RVL+TTDL+ARG++
Sbjct: 233 FCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 292
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
+++ SL+INYD+ ENY+ R GR G FG KG+ I+F T +D L I+ Y+ IEE
Sbjct: 293 IRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEE 351
Query: 361 LPSNVADLL 369
+P + + L
Sbjct: 352 MPESFLEYL 360
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 157/216 (72%), Positives = 184/216 (85%)
Query: 83 VMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKM 141
V+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YIKM
Sbjct: 2 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 61
Query: 142 FVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKR 201
FVLDEADEMLSRGFKDQIYDIFQ L + QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 62 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 121
Query: 202 DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 261
+ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 122 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 181
Query: 262 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLL +
Sbjct: 182 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLGK 217
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 158/363 (43%), Positives = 221/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ + L
Sbjct: 37 LKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKL 96
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH++VGTP
Sbjct: 97 NKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTP 156
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ R+ + +FV+DEAD+MLSR FK I I + P Q +FSAT P
Sbjct: 157 GRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFSATFPLA 216
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
K + KP I + DELTL+GI QFY VE+++ KL L L+ L I QS+IF
Sbjct: 217 VKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQINQSIIFC 274
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL RGID+Q
Sbjct: 275 NSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQ 334
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L+ I++ I+ +P
Sbjct: 335 AVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIP 394
Query: 363 SNV 365
+ +
Sbjct: 395 ATI 397
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 158/363 (43%), Positives = 221/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ + L
Sbjct: 37 LKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKL 96
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH++VGTP
Sbjct: 97 NKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTP 156
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ R+ + +FV+DEAD+MLSR FK I I + P Q +FSAT P
Sbjct: 157 GRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFSATFPLA 216
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
K + KP I + DELTL+GI QFY VE+++ KL L L+ L I QS+IF
Sbjct: 217 VKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQINQSIIFC 274
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL RGID+Q
Sbjct: 275 NSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQ 334
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L+ I++ I+ +P
Sbjct: 335 AVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIP 394
Query: 363 SNV 365
+ +
Sbjct: 395 ATI 397
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 152/364 (41%), Positives = 222/364 (60%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 61
GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ ++
Sbjct: 53 GLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPK 112
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ + Q L+L PTRELA Q +V + LG +LG+ V GGT++R+D LQ VH+VVGT
Sbjct: 113 VSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGT 172
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D+ + MF++DEAD++LS F I + Q P QV +FSAT P
Sbjct: 173 PGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPI 232
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
E + K M P I + DELTL GI Q+Y VE+++ K+ L L+ L I QS+IF
Sbjct: 233 SVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQSIIF 290
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ +V+ L K+ ++ +H M Q R+ + +FR+G R L+ +DLL RGID+
Sbjct: 291 CNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDI 350
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGR+G G+AIN ++ +D L++I++ I+ +
Sbjct: 351 QAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLGTEIQPI 410
Query: 362 PSNV 365
PS +
Sbjct: 411 PSTI 414
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 153/363 (42%), Positives = 218/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+++ L
Sbjct: 53 LKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKL 112
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QAL++ PTRELA Q +V+R LG + G+ GGT++R+D L VH++VGTP
Sbjct: 113 NKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTP 172
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ R+ +F++DEAD+MLSR FK I I LP Q +FSAT P
Sbjct: 173 GRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLT 232
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
E K ++KP I + +ELTL+GI Q+Y VE+ + KL L L+ L I Q++IF
Sbjct: 233 VKEFMVKHLHKPYEINLM-EELTLKGITQYYAFVEERQ-KLHCLNTLFSKLQINQAIIFC 290
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL RGID+Q
Sbjct: 291 NSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQ 350
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG G+AIN + +D L+ I++ I +P
Sbjct: 351 AVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIP 410
Query: 363 SNV 365
+ +
Sbjct: 411 ATI 413
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 146/363 (40%), Positives = 221/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC +L+++D
Sbjct: 131 LKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNN 190
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA++L PTRELA Q +V + L YL ++V GGTS+R+D L VH++VGTP
Sbjct: 191 NVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTP 250
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D+ ++ M V+DEAD++LS F+ + ++ Q LP Q +FSAT P
Sbjct: 251 GRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVT 310
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+ + KP ++ D+LTL G+ Q+Y VE+ + K+ L L+ L I QS+IF
Sbjct: 311 VKAFKDRHLRKPY-VINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFC 368
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ H M Q+ R+ + EFR+G+ R L+ TDL RGID+Q
Sbjct: 369 NSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQ 428
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D ++ ++ I+ +P
Sbjct: 429 AVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 488
Query: 363 SNV 365
SN+
Sbjct: 489 SNI 491
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 143/363 (39%), Positives = 223/363 (61%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC +L+++D
Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTP
Sbjct: 198 NVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTP 257
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +FSAT P
Sbjct: 258 GRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVT 317
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+ +F+ P ++ DELTL+GI QFY VE+ + K+ L L+ L I QS+IF
Sbjct: 318 VKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVEERQ-KIHCLNTLFSKLQINQSIIFC 375
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q
Sbjct: 376 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 435
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++ I+++P
Sbjct: 436 AVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 495
Query: 363 SNV 365
++
Sbjct: 496 PHI 498
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 147/361 (40%), Positives = 220/361 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LLRGIY GFEKPS IQ+ I G D++ +A++GTGKT FC L+++D
Sbjct: 161 LKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPEN 220
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA++L PTRELA Q +V + L YL ++V GGTS+R+D L VH++VGTP
Sbjct: 221 NVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTP 280
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D+ ++ M V+DEAD++LS F+ I ++ Q LP Q+ +FSAT P
Sbjct: 281 GRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVT 340
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+++ KP I+ D+LTL G+ Q+Y VE+ + K+ L L+ L I QS+IF
Sbjct: 341 VKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFC 398
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q
Sbjct: 399 NSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 458
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D ++ ++ I+ +P
Sbjct: 459 AVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 518
Query: 363 S 363
S
Sbjct: 519 S 519
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 154/375 (41%), Positives = 224/375 (59%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQL 58
+GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F +L ++
Sbjct: 155 LGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTMLSRV 214
Query: 59 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
D + Q L L+PTRELA+Q +V+ +G + + V R V+
Sbjct: 215 DPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGSS----VNAQVL 270
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSA 177
VGTPG D++RR+ L +K+FVLDEAD ML ++G DQ + + LP VQ+ +FSA
Sbjct: 271 VGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQLVLFSA 330
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
T P E E + + + +K++EL ++GIKQ Y++ E+ K E LC+LY L I
Sbjct: 331 TFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLLTIGS 390
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
S+IFV + D L KM+ HTVS HG +D RD ++ +FR G S+VLITT++LAR
Sbjct: 391 SIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTNVLAR 450
Query: 298 GIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDI 350
GID+ VS+V+NYD+PT P YLHRIGR+GRFGR GV+I+F+ R +L I
Sbjct: 451 GIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFIHDRRSYDILMAI 510
Query: 351 QKFY-NVVIEELPSN 364
+ ++ NV + +P++
Sbjct: 511 KAYFGNVEMTRVPTD 525
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 167/383 (43%), Positives = 235/383 (61%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQ 57
+GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F IL +
Sbjct: 74 LGLDPRILQGLSAMNFRKPSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVLNILSR 132
Query: 58 LDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ--RIL 111
LD Q Q AL+LAPTRELA+QI V++ +G +L +H GT+V D R
Sbjct: 133 LDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLD-GLHI---GTAVPADTNARPT 188
Query: 112 QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKV 170
+ VVVGTPG V DM++++ + +K+ VLDEAD ML + G DQ + LLP +
Sbjct: 189 RMEASVVVGTPGTVMDMIKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLPRDI 248
Query: 171 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 230
QV +FSAT P + KF + ++ +ELT+EGIKQ Y++ EE K TL LY
Sbjct: 249 QVVLFSATFPAHVHQYASKFAPAANELTLQHEELTVEGIKQLYLDCASEEDKYRTLVQLY 308
Query: 231 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 290
L + S+IFV TR + +M + HTV++ G ++ + RD I+ +FR+G ++VLI
Sbjct: 309 GLLTVGSSIIFVKTRASAVEIERRMVAEGHTVASLTGGIEGSQRDQIIDQFRAGHAKVLI 368
Query: 291 TTDLLARGIDVQQVSLVINYDLPT--QPEN---------YLHRIGRSGRFGRKGVAINFV 339
TT++LARGIDV VS+VINYD+P QP N YLHRIGR+GRFGR GV+I+FV
Sbjct: 369 TTNVLARGIDVSTVSMVINYDIPELHQPPNRPRQADFQTYLHRIGRTGRFGRVGVSISFV 428
Query: 340 T-RDDERMLFDIQKFYNVVIEEL 361
+ R++ ML IQK++N I+ +
Sbjct: 429 SNREEWEMLNQIQKYFNTDIQRI 451
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 144/363 (39%), Positives = 221/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C +++++ L
Sbjct: 50 LGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPAL 109
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L VH+V+ TP
Sbjct: 110 KAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATP 169
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D++ + + ++ K VLDEAD++LS+ F+ + + LP + QV ++SAT P
Sbjct: 170 GRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNT 229
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+K M+KP I + +ELTL G+ Q+Y V++++ K+ L L+ L I QS+IF
Sbjct: 230 VTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQEKQ-KVHCLNTLFRKLQINQSIIFC 287
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ ++V+ L K+ ++ H M QN R+ + +FR G+ R L+ +DLL RGID+Q
Sbjct: 288 NSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQ 347
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++ IE +P
Sbjct: 348 AVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIP 407
Query: 363 SNV 365
V
Sbjct: 408 KTV 410
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 144/363 (39%), Positives = 221/363 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C +++++ L
Sbjct: 50 LGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPAL 109
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L VH+V+ TP
Sbjct: 110 KAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATP 169
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D++ + + ++ K VLDEAD++LS+ F+ + + LP + QV ++SAT P
Sbjct: 170 GRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNT 229
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+K M+KP I + +ELTL G+ Q+Y V++++ K+ L L+ L I QS+IF
Sbjct: 230 VTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQEKQ-KVHCLNTLFRKLQINQSIIFC 287
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ ++V+ L K+ ++ H M QN R+ + +FR G+ R L+ +DLL RGID+Q
Sbjct: 288 NSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQ 347
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++ IE +P
Sbjct: 348 AVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIP 407
Query: 363 SNV 365
V
Sbjct: 408 KTV 410
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 144/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + ++++M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 146/364 (40%), Positives = 223/364 (61%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L+++D
Sbjct: 95 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKK 154
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+VL PTRELA Q+ ++ + +LG +KV A GGT++R+D L VHV++ T
Sbjct: 155 DYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVHVIIAT 214
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D ++M V+DEAD++LS+ F I DI LP K Q+ ++SAT P
Sbjct: 215 PGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYSATFPI 274
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ K + KP I + DELTL+GI Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 275 SVQKFMTKHLQKPYEINLM-DELTLKGITQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 332
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 333 CNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDI 392
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L I+ I+ +
Sbjct: 393 QAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPI 452
Query: 362 PSNV 365
PS++
Sbjct: 453 PSSI 456
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 145/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 102 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 161
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 162 DCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 221
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + D+I+M VLDEAD++LS+ F + DI LP Q+ ++SAT P
Sbjct: 222 PGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLYSATFPL 281
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 282 SVQKFMTLHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 339
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 340 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 399
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 400 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 459
Query: 362 PSNV 365
PS++
Sbjct: 460 PSSI 463
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/364 (39%), Positives = 222/364 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VHVV+ T
Sbjct: 163 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIAT 222
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++++ + ++++M VLDEA+++LS+ F + DI LP Q+ ++SAT P
Sbjct: 223 PGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL 282
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+IF
Sbjct: 283 SVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSIIF 340
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID+
Sbjct: 341 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 400
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+ +
Sbjct: 401 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPI 460
Query: 362 PSNV 365
PSN+
Sbjct: 461 PSNI 464
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 146/363 (40%), Positives = 215/363 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L+++D
Sbjct: 51 LKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKK 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ Q L+L PTRELA Q +V + LG ++ VKV GGT++R+D L VH+VVGTP
Sbjct: 111 SKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTP 170
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ + FV+DEAD++LS F I + P Q+ ++SAT P
Sbjct: 171 GRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLI 230
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
K +NKP I + DELTL G+ Q+Y V++ + K+ L L+ L I QS+IF
Sbjct: 231 VKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVDESQ-KVHCLNTLFSKLQINQSIIFC 288
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ +H M Q+ R+ + FR+G R L+ +DLL RGID+Q
Sbjct: 289 NSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQ 348
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG +G+AI+F++ D L+ I+ I+ +P
Sbjct: 349 AVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRIENELGTEIQPIP 408
Query: 363 SNV 365
++
Sbjct: 409 PSI 411
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/352 (39%), Positives = 219/352 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D
Sbjct: 7 LGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDT 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q +V+APTRELA Q+ + + +G + V++ GG + R L+ H++VG
Sbjct: 67 HKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++LR ++ VLDEADEML+ GF + I I +P Q +FSATMP
Sbjct: 127 TPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FM +P I VK E+T+ I+QFY+ V++++ K + L L + + +++
Sbjct: 187 DPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 147/363 (40%), Positives = 211/363 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++
Sbjct: 46 IKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKS 105
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QAL+L PTRELA Q V + LG +LG+ V GGT + +D L VH++VGTP
Sbjct: 106 TKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTP 165
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ + FV+DEAD++LS F I + P QV +FSAT P
Sbjct: 166 GRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSATFPMI 225
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
+ M P I + DELTL GI Q+Y VE+++ K+ L L+ L I QS+IF
Sbjct: 226 VKSFKDRHMRNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQSIIFC 283
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ +H M Q R+ + +FR+G R L+ +DLL RGID+Q
Sbjct: 284 NSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQ 343
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG G+AIN + DD L+ I++ I+ +P
Sbjct: 344 AVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIP 403
Query: 363 SNV 365
N+
Sbjct: 404 QNI 406
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 153/372 (41%), Positives = 226/372 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDY 60
L+ LL+GIY+ F+KPS IQ++ + ++I Q+QSGTGKTA F +L ++D
Sbjct: 121 LKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDA 180
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ + QA+ LAP+RELA+QI V+ +G Y VK + SV + +I +V+G
Sbjct: 181 SVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKTAFGIKD-SVPKGAKI---DAQIVIG 236
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPG V D+++R+ L IK+FVLDEAD ML + G DQ I LLP Q+ +FSAT
Sbjct: 237 TPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATF 296
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
+ +F I +K +EL++EGIKQ Y++ + EE K L +LY L I QS+
Sbjct: 297 SERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSI 356
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF + + + +M + HTV+ G+++ RD IM FR G+S+VL+TT+++ARGI
Sbjct: 357 IFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGI 416
Query: 300 DVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQK 352
DV QV+LV+NYD+P P+ YLHRIGR+GRFGR GV+INFV + + IQ+
Sbjct: 417 DVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQE 476
Query: 353 FYNVVIEELPSN 364
++ I +P++
Sbjct: 477 YFQRPITRVPTD 488
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 140/360 (38%), Positives = 217/360 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LLRGI+ G+ KPS IQ++ I G D++ +A++GTGKTA+F L++ D
Sbjct: 56 LKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTK 115
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
Q L+L PTRELA Q +V + LG Y+ V+V A GGTS+++D L VH++V TP
Sbjct: 116 DVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPVHILVATP 175
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D+ ++ ++DEAD++LS+ F+ + + LP + Q+ +FSAT P
Sbjct: 176 GRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQILLFSATFPVT 235
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
++ + I + +ELTL+G+ Q+Y VE+ + K+ L L+ L I QS+IF
Sbjct: 236 VKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVEERQ-KIHCLNTLFSKLQINQSIIFC 293
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ H M Q R+ + +FR+G+ R L+++DL RGID+Q
Sbjct: 294 NSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQ 353
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L+ I++ I+ +P
Sbjct: 354 DVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELGTEIKPIP 413
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 139/352 (39%), Positives = 217/352 (61%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL + +++ I GFE+ + IQ + I + DVI QAQ+GTGKTA F I+++++
Sbjct: 7 LGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNV 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
QALV+APTRELA Q+ + + +G V+V GG + R L+ HV+VG
Sbjct: 67 KNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVG 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R +LR +++ VLDEADEML+ GF + I I +PA+ Q +FSATMP
Sbjct: 127 TPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
I +FMN+P + VK E+T+ I+Q+Y+ V +++ K + L L + A +++
Sbjct: 187 DPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKK-KFDILTRLLDIQAPELAIV 245
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+R+VD L + + R + HGD+ Q R ++R+F+ G+ +L+ TD+ ARG+D
Sbjct: 246 FGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLD 305
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
+ V+ V N+D+P PE+Y+HRIGR+GR G+ GVA+ FVT + L I++
Sbjct: 306 ISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIER 357
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 141/365 (38%), Positives = 221/365 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L+++D
Sbjct: 104 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKK 163
Query: 63 VQCQA-LVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVG 120
QA +V+ PTRELA Q+ ++ + ++G VKV A GGT++R+D L VHVV+
Sbjct: 164 DSIQAAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIA 223
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D++++ + ++M VLDEAD++LS+ F + +I L + Q+ ++SAT P
Sbjct: 224 TPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLYSATFP 283
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ + KP I + +ELTL+G+ Q+Y V + + K+ L L+ L I QS+I
Sbjct: 284 LSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQINQSII 341
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL RGID
Sbjct: 342 FCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGID 401
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 360
+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++ I+
Sbjct: 402 IQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKP 461
Query: 361 LPSNV 365
+PS++
Sbjct: 462 IPSSI 466
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 149/375 (39%), Positives = 232/375 (61%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQL 58
+GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F +L ++
Sbjct: 97 LGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRV 156
Query: 59 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
+ QA+ LAP+RELA+Q +V++ +G + + V S ++++I V+
Sbjct: 157 NPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPD-SFEKNKQI---NAQVI 212
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSA 177
VGTPG V D++RR+ ++ IK+FVLDEAD ML + G DQ + + LP Q+ +FSA
Sbjct: 213 VGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSA 272
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
T + +K + + ++ +E+ ++ IKQ Y++ + E K + L +LY + I
Sbjct: 273 TFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGS 332
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT++LAR
Sbjct: 333 SIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLAR 392
Query: 298 GIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDI 350
GID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +L I
Sbjct: 393 GIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAI 452
Query: 351 QKFY-NVVIEELPSN 364
QK++ ++ + +P++
Sbjct: 453 QKYFGDIEMTRVPTD 467
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 152/378 (40%), Positives = 227/378 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L Q++
Sbjct: 101 LKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVE 159
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + H+V
Sbjct: 160 PANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---HIV 216
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 217 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 276
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 277 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIA 336
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 337 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCA 396
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 397 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 456
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 457 IQEHFNKKIERLDTDDLD 474
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 151/378 (39%), Positives = 227/378 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L Q++
Sbjct: 104 LKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVE 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + H+V
Sbjct: 163 PANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---HIV 219
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 220 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC++Y + I
Sbjct: 280 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIA 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 340 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 400 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 459
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 460 IQEHFNKKIERLDTDDLD 477
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 147/372 (39%), Positives = 214/372 (57%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ENLLR + G+EKP+ IQ I P G D++ QAQ+GTGKT F +L ++
Sbjct: 11 LGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTS 70
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
Q LVLAPTRELA Q+ + + ++ V GG S+++ L+ G V+V
Sbjct: 71 QTTP-QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIV 129
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRV D +RR +L+ + ++ VLDEADEML GF D I I + P + Q+ +FSATM
Sbjct: 130 GTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALFSATM 189
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + + K + I + T++ I+Q +V V + KLE L + E +
Sbjct: 190 PEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHN-KLEALVRVLEVENTEGII 248
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IFV TR L +K+ +R + S HGDM+Q R+ + + ++G +LI TD+ ARG+
Sbjct: 249 IFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAARGL 308
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV+++ V+NYD+P E Y+HRIGR+GR GR G+AI FVT + RML I++ N I
Sbjct: 309 DVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRIS 368
Query: 360 EL----PSNVAD 367
+ P VA+
Sbjct: 369 PMKVPSPETVAE 380
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 136/350 (38%), Positives = 213/350 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L +L + I GFE+ + IQ + I DVI QAQ+GTGKTA F ++++++
Sbjct: 10 LSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPES 69
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA+V+APTRELA Q+ + + +G +V GG + R L+ H++VGTP
Sbjct: 70 PNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVGTP 129
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D + R+++R + VLDEADEML+ GF + I I +PA+ Q +FSATMP
Sbjct: 130 GRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATMPAP 189
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
I +FM P + VK E+T+ I+QFY+ V + + K +TL L + + +++F
Sbjct: 190 IKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERK-KFDTLTRLLDIQSPELAIVFG 248
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
T+R+VD LT+ + R +T HGD+ Q R + +R+F+ G+ VL+ TD+ ARG+D+
Sbjct: 249 RTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDIS 308
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T ++ ML I++
Sbjct: 309 GVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQ 358
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 148/368 (40%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 59 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 118
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQA-GVHVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 119 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVG 178
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 179 TPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 238
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 239 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 297
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q+ R ++F+ R+L+ T+L RG
Sbjct: 298 VIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRG 357
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D R L D+Q + V
Sbjct: 358 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVN 417
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 418 ISELPEEI 425
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 146/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG +V++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 411 ISELPDEI 418
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 151/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L Q++
Sbjct: 104 LKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVE 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V
Sbjct: 163 PANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIV 219
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 220 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 280 ATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIA 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 340 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 400 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 459
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 460 IQEHFNKKIERLDTDDLD 477
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 151/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L Q++
Sbjct: 99 LKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVE 157
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V
Sbjct: 158 PANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIV 214
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 215 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 274
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 275 ATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIA 334
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 335 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 394
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 395 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 454
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 455 IQEHFNKKIERLDTDDLD 472
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 150/378 (39%), Positives = 227/378 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I + H+V
Sbjct: 157 PAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE---HIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 150/378 (39%), Positives = 227/378 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I + H+V
Sbjct: 157 PAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE---HIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 149/378 (39%), Positives = 227/378 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I + H+V
Sbjct: 157 PAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE---HIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC++Y + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 150/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q++ G +V
Sbjct: 157 PADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV---GEQIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV E K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 150/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q++ G +V
Sbjct: 157 PADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV---GEQIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV E K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 150/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 102 LKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 160
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q++ G +V
Sbjct: 161 PADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV---GEQIV 217
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 218 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 277
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV E K + LC+LY + I
Sbjct: 278 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIA 337
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 338 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 397
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 398 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 457
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 458 IQEHFNKKIERLDTDDLD 475
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 133/350 (38%), Positives = 215/350 (61%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L +L++ I GFE+ + IQ + I DVI QAQ+GTGKTA F ++++++
Sbjct: 10 LSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPES 69
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
QA+V+APTRELA Q+ + + +G KV GG + R L+ +++VGTP
Sbjct: 70 PNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTP 129
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D + R+++R + + V+DEADEML+ GF D I I +P++ Q +FSATMP
Sbjct: 130 GRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAP 189
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
I +FM +P + VK E+T+ I+QFY+ V++ + K +TL L + + +++F
Sbjct: 190 IKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERK-KFDTLTRLLDIQSPELAIVFG 248
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
T+R+VD L + + R + HGD+ Q R + +R+F+ G+ VL+ TD+ ARG+D+
Sbjct: 249 RTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDIS 308
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T ++ ML I++
Sbjct: 309 GVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQ 358
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 148/379 (39%), Positives = 229/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 105 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 163
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + + + ++
Sbjct: 164 ALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTK---QII 220
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP++ Q+ +FS
Sbjct: 221 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFS 280
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV E + K + LC++Y + I
Sbjct: 281 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIYGGITIG 340
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ A
Sbjct: 341 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCA 400
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 401 RGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 460
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q +N I++L P ++ ++
Sbjct: 461 QDHFNSNIKQLDPEDMDEI 479
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 140/361 (38%), Positives = 213/361 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+E+PS IQ+ I G DV+ +A++GTGKT +C +L+Q+D
Sbjct: 65 LKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTK 124
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILQAGVHVVVGT 121
QALV+ PTRELA Q ++ L +L ++V GGT +++D RI Q V +++ T
Sbjct: 125 DYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQK-VQLIIAT 183
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D++ ++ + ++ VLDEAD++LS F+ + + LP Q+ +FSAT P
Sbjct: 184 PGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPL 243
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
K + +P I + +ELTL+G+ Q+Y V++ + K+ L L+ L I QS+IF
Sbjct: 244 TVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIF 301
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
N+ ++V+ L K+ + H M Q R+ + +FR G R L+ +DL RGIDV
Sbjct: 302 CNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDV 361
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L I+K I+ +
Sbjct: 362 QAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPI 421
Query: 362 P 362
P
Sbjct: 422 P 422
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 145/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +SL +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 150/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V
Sbjct: 157 PSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 145/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++
Sbjct: 99 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 158
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 159 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 218
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +SL +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 219 TPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 278
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 279 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 337
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 338 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 397
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 398 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 457
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 458 VAELPEEI 465
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 149/379 (39%), Positives = 229/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 104 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVN 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + + + +V
Sbjct: 163 ALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTK---QIV 219
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP++ Q+ +FS
Sbjct: 220 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV E + K + LC++Y + I
Sbjct: 280 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQALCNIYGGITIG 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ A
Sbjct: 340 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 400 RGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 459
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q +N I++L P ++ ++
Sbjct: 460 QDHFNSSIKQLDPEDMDEI 478
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 149/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 98 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 156
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L L+PT ELA Q KV+ +G + +K+ V G + Q++ + +V
Sbjct: 157 PADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVSE---QIV 213
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 214 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFS 273
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV E K + LC+LY + I
Sbjct: 274 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIA 333
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 393
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L
Sbjct: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR 453
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ +N IE L ++ D
Sbjct: 454 IQEHFNKKIERLDTDDLD 471
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 143/368 (38%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+D++ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +SL +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ +D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 137/363 (37%), Positives = 215/363 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL GI+ G+EKPS IQ+ I G +++ +A++GTGKTA F +L++ +
Sbjct: 67 LKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEKCNTHK 126
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
Q L+L PTRELA Q +++ LG ++ V+ GGTS+RED L VH++ GTP
Sbjct: 127 NFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHILCGTP 186
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GR+ D+ + + V+DEAD++LS F+ + ++ + LP + Q+ ++SAT P
Sbjct: 187 GRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSATFPVT 246
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 242
E +++ I + DELTL+GI Q+Y V KE K+ L L+ L I Q++IF
Sbjct: 247 VKEFRAIYLSDAHEINLM-DELTLKGITQYYAFV-KERQKVHCLNTLFAKLQINQAIIFC 304
Query: 243 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 302
N+ +V+ L K+ ++ H M Q R+ + +FR+G+ R L+++DL RGID+Q
Sbjct: 305 NSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRGIDIQ 364
Query: 303 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 362
V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L+ I+ I+ +P
Sbjct: 365 SVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELGTEIQPIP 424
Query: 363 SNV 365
+ +
Sbjct: 425 NEI 427
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 148/379 (39%), Positives = 230/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 104 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + + + +V
Sbjct: 163 ALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK---QIV 219
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF+DQ I + LP++ Q+ +FS
Sbjct: 220 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSECQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV + K + LC++Y + I
Sbjct: 280 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIG 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ A
Sbjct: 340 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 400 RGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 459
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q +N I++L P ++ ++
Sbjct: 460 QDHFNSSIKQLDPEDMDEI 478
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 149/374 (39%), Positives = 224/374 (59%)
Query: 7 LLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLV 63
LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 12 LLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDR 70
Query: 64 QCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V+GTP
Sbjct: 71 YPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIVIGTP 127
Query: 123 GRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSATMP 180
G V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FSAT
Sbjct: 128 GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFE 187
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I Q++I
Sbjct: 188 DSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMI 247
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGID
Sbjct: 248 FCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGID 307
Query: 301 VQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKF 353
V+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L IQ+
Sbjct: 308 VEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEH 367
Query: 354 YNVVIEELPSNVAD 367
+N IE L ++ D
Sbjct: 368 FNKKIERLDTDDLD 381
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 149/374 (39%), Positives = 224/374 (59%)
Query: 7 LLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLV 63
LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 20 LLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDR 78
Query: 64 QCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V+GTP
Sbjct: 79 YPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIVIGTP 135
Query: 123 GRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSATMP 180
G V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FSAT
Sbjct: 136 GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFE 195
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I Q++I
Sbjct: 196 DSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMI 255
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGID
Sbjct: 256 FCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGID 315
Query: 301 VQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKF 353
V+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L IQ+
Sbjct: 316 VEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEH 375
Query: 354 YNVVIEELPSNVAD 367
+N IE L ++ D
Sbjct: 376 FNKKIERLDTDDLD 389
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 143/362 (39%), Positives = 210/362 (58%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +L+
Sbjct: 31 LALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNL 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
+ QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L++G H+VV
Sbjct: 91 SQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAHIVV 150
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FSATM
Sbjct: 151 GTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFSATM 210
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
PP EI +F+ P + V T+ ++Q Y V+ E K E + L ET S+
Sbjct: 211 PPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETDASI 269
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
+FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++ARG+
Sbjct: 270 VFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVARGL 329
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I++ +E
Sbjct: 330 DVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSSME 389
Query: 360 EL 361
E+
Sbjct: 390 EI 391
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 143/362 (39%), Positives = 210/362 (58%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +L+
Sbjct: 31 LALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNL 90
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
+ QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L++G H+VV
Sbjct: 91 SQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAHIVV 150
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FSATM
Sbjct: 151 GTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFSATM 210
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
PP EI +F+ P + V T+ ++Q Y V+ E K E + L ET S+
Sbjct: 211 PPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETDASI 269
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
+FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++ARG+
Sbjct: 270 VFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVARGL 329
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I++ +E
Sbjct: 330 DVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSSME 389
Query: 360 EL 361
E+
Sbjct: 390 EI 391
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 144/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +SL +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ +D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 144/368 (39%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPIN 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +SL +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ +D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 147/379 (38%), Positives = 229/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 83 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 141
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + + + ++
Sbjct: 142 TLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK---QII 198
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP++ Q+ +FS
Sbjct: 199 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFS 258
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV E + K + LC++Y + I
Sbjct: 259 ATFEDSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIG 318
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++
Sbjct: 319 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVSR 378
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 379 RGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 438
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q +N I++L P ++ ++
Sbjct: 439 QDHFNSSIKQLDPEDMDEI 457
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 148/378 (39%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 99 LKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE 157
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
G Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V
Sbjct: 158 PGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIV 214
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 215 IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFS 274
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + +K + P I +KR+E TL+ IKQ+YV + K LC++Y + I
Sbjct: 275 ATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFRALCNIYGAITIA 334
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q+++F +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 335 QAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCA 394
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN V ++ +L
Sbjct: 395 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNR 454
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ+ ++ I +L ++ D
Sbjct: 455 IQEHFSKKINKLDTDDLD 472
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 143/372 (38%), Positives = 222/372 (59%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +LQ++
Sbjct: 7 LGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQR 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
G + Q L++ PTRELA Q+ + LG YL V+ A GG ++ R L+ GV V+VG
Sbjct: 67 GK-KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVG 125
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++ IK+ +LDEADEML GF D I I L + Q +FSAT+P
Sbjct: 126 TPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLP 185
Query: 181 PEALEITRKFMN--KPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
I +KF+ K V+ LV R++ T+ I+Q Y + + E K+E L + + Q+
Sbjct: 186 APIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSELPIQA 242
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
++F T+++VD + +++ R + HGDM Q R ++ F++G + +L+ TD+ ARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I++ N +
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRL 362
Query: 359 --EELPSNVADL 368
E LP V DL
Sbjct: 363 KREILPEPV-DL 373
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 143/372 (38%), Positives = 222/372 (59%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +LQ++
Sbjct: 7 LGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQR 66
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
G + Q L++ PTRELA Q+ + LG YL V+ A GG ++ R L+ GV V+VG
Sbjct: 67 GK-KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVG 125
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
TPGR+ D + R++ IK+ +LDEADEML GF D I I L + Q +FSAT+P
Sbjct: 126 TPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLP 185
Query: 181 PEALEITRKFMN--KPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
I +KF+ K V+ LV R++ T+ I+Q Y + + E K+E L + + Q+
Sbjct: 186 APIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSELPIQA 242
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
++F T+++VD + +++ R + HGDM Q R ++ F++G + +L+ TD+ ARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I++ N +
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRL 362
Query: 359 --EELPSNVADL 368
E LP V DL
Sbjct: 363 KREILPEPV-DL 373
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 142/368 (38%), Positives = 215/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ HVVVG
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R +S +K FVLDE D+ML + + + +IF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
+ + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
+IFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 148/379 (39%), Positives = 228/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 83 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 141
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + I + ++
Sbjct: 142 ALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK---QII 198
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP+ Q+ +FS
Sbjct: 199 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFS 258
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV + K + LC++Y + I
Sbjct: 259 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIG 318
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ A
Sbjct: 319 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLITTNVCA 378
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 379 RGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 438
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q +N I++L P ++ ++
Sbjct: 439 QDHFNSNIKQLDPEDMDEI 457
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 142/368 (38%), Positives = 216/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+D++ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ ++R ++L +K FVLDE D+ML + + + DIF+L P + Q +FSAT+
Sbjct: 171 TPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+Y ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L+ + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ + D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 147/379 (38%), Positives = 229/379 (60%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 104 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + + + +V
Sbjct: 163 ALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK---QIV 219
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP++ Q+ +FS
Sbjct: 220 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALPSECQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I ++++ELTL I+Q+YV + K + LC++Y + I
Sbjct: 280 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIG 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ A
Sbjct: 340 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L I
Sbjct: 400 RGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKI 459
Query: 351 QKFYNVVIEEL-PSNVADL 368
Q ++ I++L P ++ ++
Sbjct: 460 QDHFSENIKQLDPEDMDEI 478
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 143/372 (38%), Positives = 217/372 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +QQ I G D+I QA+SG GKTA F LQQ++
Sbjct: 59 LKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVA 118
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVV 118
+C LV+ TRELA QI Y+ +K GGT +++D +L + H++
Sbjct: 119 GECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHII 178
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSA 177
VGTPGR+ ++R + LR +++FVLDE D+ML + + + +IF+ P + QV +FSA
Sbjct: 179 VGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSA 238
Query: 178 TMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
T+ E I +KFM P V D +LTL G++Q++V +E++E K L +L + L
Sbjct: 239 TLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKE-KNRKLNELLDDLQFN 297
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q +IFV + + L +R + A H + Q R +EF+ + R+ + TD+
Sbjct: 298 QVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFG 357
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYN 355
RGID+++++L INYD+P ++YLHR+GR+GRFG KG+A++FVT D D+ +L I+K +
Sbjct: 358 RGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFE 417
Query: 356 VVIEELPSNVAD 367
V I E P + D
Sbjct: 418 VPIPEFPKDGID 429
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 145/371 (39%), Positives = 217/371 (58%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL ENLL + + GF + IQ I P G DV+ +AQ+GTGKTA F L ++D
Sbjct: 20 LGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDT 79
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALG-DYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
+ + Q +VLAPTRELA Q+ + + + G D G++V GG S + L+ G VVV
Sbjct: 80 SIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVV 139
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGR+ D LRR+SL+ D +++ VLDEADEML+ GF + I I +P Q+ +FSATM
Sbjct: 140 GTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSATM 199
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
PP +I +F+ P I V + I Q+ V K+ L + E + +
Sbjct: 200 PPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGIT-KMTALERIAEVVEYDAMI 258
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IFV TR + +K+ + A +GD++Q R+ + + +SG S +L+ TD++ARG+
Sbjct: 259 IFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGL 318
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN--VV 357
D+ ++SLVINYDLP E Y+HRIGR+GR GR+G++I FV + + ++ N V+
Sbjct: 319 DIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPREMYSIRHYERLTNGTVL 378
Query: 358 IEELPSNVADL 368
+LP N+ D+
Sbjct: 379 NYDLP-NIQDI 388
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 149/378 (39%), Positives = 224/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 104 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 162
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + I + ++
Sbjct: 163 ALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK---QII 219
Query: 119 VGTPGRVFDMLRRQSLRP-DYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + L I++FVLDEAD M+ ++GF D I + LP++ Q+ +FS
Sbjct: 220 IGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFS 279
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + P I ++++ELTL I+Q+YV E + K + LC++Y ++ I
Sbjct: 280 ATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIG 339
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ A
Sbjct: 340 QAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCA 399
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+ L I
Sbjct: 400 RGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKI 459
Query: 351 QKFYNVVIEELPSNVADL 368
Q +N I++L N D+
Sbjct: 460 QDHFNSSIKQL--NAEDM 475
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 147/378 (38%), Positives = 227/378 (60%)
Query: 4 QENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY 60
+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNA 59
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVVV 119
+ Q L LAPT ELA Q +V+ +G + + V+V + G + I + +++
Sbjct: 60 LELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK---QIII 116
Query: 120 GTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSA 177
GTPG V D +R+ + I++FVLDEAD M+ ++GF DQ I + LP+ Q+ +FSA
Sbjct: 117 GTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFSA 176
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
T + + + P I ++++ELTL I+Q+YV + K + LC++Y + I Q
Sbjct: 177 TFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQ 236
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ AR
Sbjct: 237 AIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCAR 296
Query: 298 GIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 351
GIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ
Sbjct: 297 GIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQ 356
Query: 352 KFYNVVIEEL-PSNVADL 368
+N I++L P ++ ++
Sbjct: 357 DHFNSNIKQLDPEDMDEI 374
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 142/368 (38%), Positives = 215/368 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+D++ QA+SG GKTA F LQQ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VK A GG S+++D+ +L+ H+VVG
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKDEDVLKKNCPHIVVG 170
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R ++L +K FVLDE D+ML + + + DIF+L P + Q +FSAT+
Sbjct: 171 TPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATL 230
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ + V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + + L+ + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 290 VIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYNVV 357
+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ + D ++L D+Q + V
Sbjct: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVIFVSDETDAKILNDVQDRFEVN 409
Query: 358 IEELPSNV 365
+ ELP +
Sbjct: 410 VAELPEEI 417
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 147/378 (38%), Positives = 226/378 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDY 60
L+ +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F +L +++
Sbjct: 80 LKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNV 139
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVV 119
L Q L L+PT ELA Q +V +G + +K+ V G V ++I + H+++
Sbjct: 140 CLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEE---HILI 196
Query: 120 GTPGRVFDM-LRRQSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSA 177
GTPG++ D ++ + I +FVLDEAD M++ +G DQ I ++L Q+ FSA
Sbjct: 197 GTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSA 256
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
T E ++ R + P I + R+E +LE IKQ+YV + EE K + ++Y +++ Q
Sbjct: 257 TYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQ 316
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
++IF +T+R WL KM S H+V+ GD+ R ++ FRSG +VLITT++L+R
Sbjct: 317 AIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSR 376
Query: 298 GIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLF--D 349
GID++Q+ +V+N+DLP E YLHRIGR+GRFG+ G+AIN +T D++ M D
Sbjct: 377 GIDIEQLQVVVNFDLPVDLDGMADCETYLHRIGRTGRFGKSGIAINLIT-DEKTMKVCSD 435
Query: 350 IQKFYNVVIEELPSNVAD 367
I+K +N IE L ++ AD
Sbjct: 436 IEKHFNKKIEVLNTDSAD 453
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 141/372 (37%), Positives = 220/372 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LR I GFE PS +Q I G+D++ QA+SG GKTA F LQQL+
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 63 VQ-CQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGV-HVVV 119
C LV+ TRELA QI K Y+ VKV GG ++++D+ L++G H+VV
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSAT 178
GTPGR+ ++R + L +K FVLDE D+ML + + + +IF+ P QV +FSAT
Sbjct: 168 GTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSAT 227
Query: 179 MPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
+ + + +KFM P+ + V + +LTL G++Q YVN+++ E K + L +L + L Q
Sbjct: 228 LSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENE-KNKKLFELLDVLEFNQ 286
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
VIFV + ++ L+ + ++ H M Q R ++F+ R+L+ T+L R
Sbjct: 287 VVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGR 346
Query: 298 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNV 356
G+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L ++Q ++V
Sbjct: 347 GMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDV 406
Query: 357 VIEELPSNVADL 368
I ELP + DL
Sbjct: 407 NISELPEEI-DL 417
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 148/364 (40%), Positives = 216/364 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+Y GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +D
Sbjct: 91 LKPQLLKGVYEMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVD 149
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
Q L ++PT ELA Q KV+ +G Y V + V G + RI +V
Sbjct: 150 PACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVRIKD---QIV 206
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D ++ + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 207 IGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQMLLFS 266
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + + P I +KR+E TL+ IKQ+YV +E K LC++Y + I
Sbjct: 267 ATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIYGAITIA 326
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ +WL +M H V+ G+M R ++ FR G +VLITT++ A
Sbjct: 327 QAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLITTNVCA 386
Query: 297 RGIDVQQVSLVINYDLP----TQPEN--YLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QVS+VIN+DLP + P+N YLHRIGR+GRFG++G+AIN V D +R + +I
Sbjct: 387 RGIDVEQVSVVINFDLPLDKDSNPDNETYLHRIGRTGRFGKRGLAINMV--DSQRSM-EI 443
Query: 351 QKFY 354
K Y
Sbjct: 444 LKTY 447
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 145/370 (39%), Positives = 206/370 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F +LQ LD
Sbjct: 11 LGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDP 70
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
L Q LVLAPTRELA Q+ + M ++ GV V A GG R L+ G +VV
Sbjct: 71 ELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVV 130
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGR+ D L+R +L + VLDEADEML GF + + I +P Q +FSATM
Sbjct: 131 GTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATM 190
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P ITR+FM +P + ++ T I Q Y V K E L E ++
Sbjct: 191 PEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMR-KNEALVRFLEAEDFDAAI 249
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IFV T+ + + + + +A +GDM+Q R+ + + G +LI TD+ ARG+
Sbjct: 250 IFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGL 309
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV+++SLV+NYD+P E+Y+HRIGR+GR GR G A+ FV + R+L +I++ + I
Sbjct: 310 DVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIP 369
Query: 360 ELPSNVADLL 369
E+ A+LL
Sbjct: 370 EVELPNAELL 379
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 146/368 (39%), Positives = 208/368 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q ALVL TRELA QI YL KV GG +++ + +L+ H+VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGRV + R + L ++ F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + +KFM P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q
Sbjct: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQV 291
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 351
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVV 357
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + D +L +Q+ + V
Sbjct: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVD 411
Query: 358 IEELPSNV 365
I+ELP +
Sbjct: 412 IKELPEQI 419
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 507 (183.5 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 114/314 (36%), Positives = 185/314 (58%)
Query: 59 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAG--V 115
D V+C L LA TRELA QI+ YL V+ GG S+ + ++ +
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGV 174
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
FSATM E ++ +KF+ PV I + + +L L G+ Q YV +++++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITT 292
Q +IFV + + L DK+ + + S A HG ++Q R +F+ +R+L++T
Sbjct: 317 EFNQVIIFVKSVTRAITL-DKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVST 375
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQ 351
DL RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ ++D L ++Q
Sbjct: 376 DLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQ 435
Query: 352 KFYNVVIEELPSNV 365
+ V I E+P+ +
Sbjct: 436 TRFEVAISEMPNKI 449
Score = 133 (51.9 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LLR I GFE PS +QQ I G D++ QA+SG GKTA F ILQQLD
Sbjct: 62 LKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLD 118
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 507 (183.5 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 114/314 (36%), Positives = 185/314 (58%)
Query: 59 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAG--V 115
D V+C L LA TRELA QI+ YL V+ GG S+ + ++ +
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGV 174
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
FSATM E ++ +KF+ PV I + + +L L G+ Q YV +++++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITT 292
Q +IFV + + L DK+ + + S A HG ++Q R +F+ +R+L++T
Sbjct: 317 EFNQVIIFVKSVTRAITL-DKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVST 375
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQ 351
DL RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ ++D L ++Q
Sbjct: 376 DLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQ 435
Query: 352 KFYNVVIEELPSNV 365
+ V I E+P+ +
Sbjct: 436 TRFEVAISEMPNKI 449
Score = 133 (51.9 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LLR I GFE PS +QQ I G D++ QA+SG GKTA F ILQQLD
Sbjct: 62 LKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLD 118
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 144/365 (39%), Positives = 217/365 (59%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 107 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 165
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVV 118
+ Q L LAPT ELA Q +V+ +G + + V+V + G + I + ++
Sbjct: 166 ALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK---QII 222
Query: 119 VGTPGRVFDMLRRQSLRP-DYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D + L I++FVLDEAD M+ ++GF D I + LP++ Q+ +FS
Sbjct: 223 IGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFS 282
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + P I ++++ELTL I+Q+YV E + K + LC++Y ++ I
Sbjct: 283 ATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIG 342
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ A
Sbjct: 343 QAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCA 402
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+ L I
Sbjct: 403 RGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKI 462
Query: 351 QKFYN 355
Q ++
Sbjct: 463 QDHFS 467
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 141/372 (37%), Positives = 216/372 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDY 60
L+ LLRGIYA GF +PS IQ+ + ++I Q+QSGTGKTA F +L ++D
Sbjct: 104 LKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDA 163
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
Q + L+PT ELA Q KV+ +G + G++V + G + R L+A +V+
Sbjct: 164 NKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSR-LEA--QIVI 220
Query: 120 GTPGRVFDM-LRRQSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSA 177
GTPG V D + + + + I +FVLDEAD M++ +G D + + +P Q+ +FSA
Sbjct: 221 GTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQMLLFSA 280
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
T + + P I +K++ELTL+ I+QFY E +E K LC+LY + I Q
Sbjct: 281 TFEDSVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYGVITIAQ 340
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
+++F TR+ WL+ K+ H V+ G++ R +++ FR G +VL+TT++ AR
Sbjct: 341 AIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCAR 400
Query: 298 GIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 351
GIDV+QVS+V+N+DLP E YLHRIGR+GRFG+KG+A++ + ML +I+
Sbjct: 401 GIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVYMLKEIE 460
Query: 352 KFYNVVIEELPS 363
+N I +L S
Sbjct: 461 DHFNTKITKLNS 472
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 141/369 (38%), Positives = 207/369 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
+ +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L ++D
Sbjct: 20 IHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITS 79
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGT 121
QALVL PTRELA Q+ + G YL + V GG+S L+ G VVVGT
Sbjct: 80 KVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D L R +L + VLDEADEML+ GF D + I P QV +FSATMPP
Sbjct: 140 PGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPP 199
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
+++ K+++ P + K E I Q Y+ V + K++ L + E ++F
Sbjct: 200 AIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEVEPFEAMIVF 256
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
V T++ + + +K+R+R + +A GD+ Q R+ + R G +L+ TD+ ARG+DV
Sbjct: 257 VRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDV 316
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE- 360
+++S V+NYD+P E+Y+HRIGR+GR GR G A+ FV+ + +L I+K + E
Sbjct: 317 ERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQTLTEA 376
Query: 361 -LPSNVADL 368
LP+ V D+
Sbjct: 377 QLPT-VEDV 384
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 144/378 (38%), Positives = 221/378 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+ LL+G+YA GF +PS IQ+ + P ++I Q+QS TGKTA F +L +D
Sbjct: 107 LKPQLLQGVYAMGFNRPSKIQETAL-PMMLAEPPQNLIAQSQSRTGKTAAFVLAMLSHVD 165
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVV 118
+ L + PT ELA Q KV+ +G Y V++ + G + ++ + +V
Sbjct: 166 TENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGAKLQE---QIV 222
Query: 119 VGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG V D ++ + + P IK+FVLDEAD M++ +G +DQ I ++LP Q+ +FS
Sbjct: 223 IGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTCQMLLFS 282
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT ++ + P I +KR+E TL+ IKQ+YV +E K + LC++Y + I
Sbjct: 283 ATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIYGAITIA 342
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ A
Sbjct: 343 QAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCA 402
Query: 297 RGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN ++ L
Sbjct: 403 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMADSKFSMNTLNR 462
Query: 350 IQKFYNVVIEELPSNVAD 367
IQ +N IE+L ++ D
Sbjct: 463 IQDHFNKKIEKLDTDDLD 480
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 138/372 (37%), Positives = 210/372 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA F LQQLD
Sbjct: 69 LKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVP 128
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ---AGVHVV 118
+ +V+ RELA QI Y+ VK GGT + +D +L+ H+V
Sbjct: 129 GEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIV 188
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSA 177
V TPGR+ ++R + + ++K FV+DE D++L + + +IF+ P QV +FSA
Sbjct: 189 VATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSA 248
Query: 178 TMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
T+ E I R+F+ P+ I V + +LTL G++Q+Y+ +E+ E K L L + L
Sbjct: 249 TLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEERE-KNRKLAQLLDDLEFN 307
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q +IFV + + + LT + + + HG M Q R + F+ R+ ++TD+
Sbjct: 308 QVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFG 367
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYN 355
RGID+++++L INYDL + + YLHR+GR+GRFG KG+AI+FV+ ++DE +L IQ+ ++
Sbjct: 368 RGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFD 427
Query: 356 VVIEELPSNVAD 367
V I E P D
Sbjct: 428 VKIAEFPEEGID 439
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 138/368 (37%), Positives = 213/368 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ-RILQAGVHVVVG 120
+ + + TRELA QI K YL GVKV GG ++++D+ R+ H+VVG
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R L+ D +K FVLDE D+M+ + + +I ++ P + QV +FSAT+
Sbjct: 168 TPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATL 227
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
P E + ++FM P+ + V + +LTL G++Q YV +++ E K L +L + L Q
Sbjct: 228 PKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQV 286
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV ++ + L + ++ A H M Q R + F+ R+L+ TDL RG
Sbjct: 287 VIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRG 346
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVV 357
+D+++V++V NYD+P ++YLHR+ R+GRFG KG+AI FV+ +D + L +Q +++
Sbjct: 347 MDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDIS 406
Query: 358 IEELPSNV 365
I ELP +
Sbjct: 407 ITELPEKI 414
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 329 (120.9 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 85/224 (37%), Positives = 121/224 (54%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q ALVL TRELA QI YL KV GG +++ + +L+ H+VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGRV + R + L ++ F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL 223
E + +KFM ++ + ++ ++ F VE EW+L
Sbjct: 233 SKEIRPVCKKFMQD----FLENETVS---VRLFSFGVENSEWRL 269
Score = 308 (113.5 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 67/174 (38%), Positives = 101/174 (58%)
Query: 194 PVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLT 252
P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q VIFV + + L
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 364
Query: 253 DKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 312
+ + H M Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+
Sbjct: 365 KLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDM 424
Query: 313 PTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNV 365
P + YLHR+GR+GRFG KG+AI FV + D +L +Q+ + V I+ELP +
Sbjct: 425 PDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 478
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 142/370 (38%), Positives = 214/370 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA F LQQ++
Sbjct: 58 LKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVD 117
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ---AGVHVV 118
+ LVL TRELA QI+ YL V+ GG ++++D + H+V
Sbjct: 118 GEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIV 177
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSA 177
V TPGR+ ++R + L+ + +K FVLDE D++L S + I ++F+ P + QV +FSA
Sbjct: 178 VATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSA 237
Query: 178 TMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
T+ E I +KFM P+ I V + +LTL G++Q YV +E E+ K + DL ++L
Sbjct: 238 TLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRKINDLLDSLEFN 296
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q VIFV + + + L +R + HG + Q R + F+ R+ + TD+
Sbjct: 297 QVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFG 356
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD-IQKFYN 355
RGID+++V++VINYD+P P++YLHR+GR+GRFG KG+AI F + +++ + D IQ+ +
Sbjct: 357 RGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFE 416
Query: 356 VVIEELPSNV 365
V I ELP +
Sbjct: 417 VNITELPDEI 426
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 122/167 (73%), Positives = 136/167 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 48 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 107
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 108 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 167
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL 166
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 168 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL 214
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 142/380 (37%), Positives = 228/380 (60%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD-VIQQAQSGTGKTATFCSGILQQLD 59
+GL+ LL+G+YA G+ KPS IQ+ + + + +I Q+QSGTGKTA F G+L +D
Sbjct: 75 LGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLNCVD 134
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
+ QA+ ++PT+ELA Q +V+ +G + +K + + + + + V++
Sbjct: 135 PSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYI--SEIEVPKNVTN---QVII 189
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSAT 178
GTPG++ + + ++ L ++KM VLDEAD ++ + +QI I +LLP+ V+V +FSAT
Sbjct: 190 GTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCLFSAT 249
Query: 179 MPPEALEITRKFMNKP-VRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
E+ +K + P I +KR EL++E I Q++++ E+ K L D+Y +++ Q
Sbjct: 250 FSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIYGFISVGQ 309
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHG-DMDQNTRDIIMREFRSGSSRVLITTDLLA 296
S++FV+T + KM H+VS +G D+ R +++F+ G S+VLITT++LA
Sbjct: 310 SIVFVHTIATAKSVHQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDGKSKVLITTNVLA 369
Query: 297 RGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFD 349
RGID+ QVSLVINYD+P P +YLHRIGR GRFGR GVA++FV + L +
Sbjct: 370 RGIDIPQVSLVINYDVPLDEMGKPDPVHYLHRIGRVGRFGRSGVALSFVYDQQSTNKLMN 429
Query: 350 IQKFYNVVIEELPSNVADLL 369
I V ++EL S+ + L
Sbjct: 430 ISTHLGVPLKELKSSEIESL 449
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 140/367 (38%), Positives = 220/367 (59%)
Query: 15 GFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLA 71
GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++ + Q L LA
Sbjct: 2 GFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCLCLA 60
Query: 72 PTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDM-L 129
PT ELA Q +V+ +G + + V+V + G + + + +++GTPG V D
Sbjct: 61 PTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK---QIIIGTPGTVLDWCF 117
Query: 130 RRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITR 188
+R+ + I++FVLDEAD M+ ++GF DQ I + LP++ Q+ +FSAT +
Sbjct: 118 KRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAE 177
Query: 189 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKV 248
+ + P I ++++ELTL I+Q+YV E + K + LC++Y + I Q++IF TRR
Sbjct: 178 RIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 237
Query: 249 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 308
WLT +M H VS G++ + R I++ FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 238 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 297
Query: 309 NYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL- 361
N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L
Sbjct: 298 NFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQLD 357
Query: 362 PSNVADL 368
P ++ ++
Sbjct: 358 PEDMDEI 364
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 142/379 (37%), Positives = 219/379 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 69 LSRPVLEGLRAVGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLE 127
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 128 NLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 186
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 187 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 246
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P K+M +P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 247 PEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQELFSK 306
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + S+ G+MDQN R M + + RVLI+T
Sbjct: 307 IPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCRVLIST 366
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+ I
Sbjct: 367 DLTSRGIDAEKVNLVVNLDVPLDCETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIA 426
Query: 352 KFYNVVIEELPSNVA-DLL 369
+ + + LP + DL+
Sbjct: 427 QKCTINLLPLPDPIPPDLM 445
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 141/363 (38%), Positives = 209/363 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ L R I GFE PS +Q I G DVI QA+SG GKTA F LQQ+D
Sbjct: 55 LKPELERVIGDCGFEHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNP 114
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL-QAGVHVVVG 120
LVL TRELA QI YL VK GG V+ + ++ + ++++G
Sbjct: 115 NGITTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIKEKKPNIIIG 174
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + +L IK F+LDE D ML S + + IF+L+PA QV +FSAT+
Sbjct: 175 TPGRILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATL 234
Query: 180 PPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
I +KFMN P+ I + +LTL G++Q+YV + +E+ K + L +L ++L Q+
Sbjct: 235 SDTIRPICKKFMNNPLEIYINDGSKLTLHGLQQYYVPITEEQ-KNKKLIELLDSLDFNQA 293
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + R+ D L ++ H D+DQ R R+F++ SR+++ T++ RG
Sbjct: 294 VIFVKSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRG 353
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
ID+++V++VINYD+ + YLHR+GR+GRFG KG+AI+FV ++ +L +Q + V I
Sbjct: 354 IDIERVNVVINYDMAESADTYLHRVGRAGRFGTKGLAISFVPSKEDPVLEQVQSKFVVSI 413
Query: 359 EEL 361
+EL
Sbjct: 414 KEL 416
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 140/374 (37%), Positives = 216/374 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 69 LSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLE 127
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 128 NLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 186
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 187 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 246
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P K+M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 247 PEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQELFSR 306
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + S+ G+M+QN R M + + RVLI+T
Sbjct: 307 IPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLIST 366
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+ I
Sbjct: 367 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIA 426
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 427 QKCNINLLPLPDPI 440
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 145/379 (38%), Positives = 216/379 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L++ LL+G+Y GF +PS IQ + P ++I Q+QSGTGKTA F +L ++
Sbjct: 37 LKKELLQGVYTMGFNRPSKIQANAL-PILMAHPPQNLIAQSQSGTGKTAAFVLAMLSRVK 95
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVV 118
Q L LAPT ELA QI V +G + ++V V G V +L+ +V
Sbjct: 96 GAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGT-VLEE--QIV 152
Query: 119 VGTPGRVFDM-LRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFS 176
+GTPG + D +R+ L I MFVLDEAD M+ ++GF Q I + LP Q+ +FS
Sbjct: 153 IGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALPKDCQMLLFS 212
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT + + +++P+ I ++++ELTL I+Q+Y E K E LC+LY ++ I
Sbjct: 213 ATFKETLWKFALQIVSRPIIIKLRQEELTLTNIRQYYFVCRNWEQKYEALCNLYGSITIG 272
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF TRR DWL+ KM H V+ ++ R +++ FR G +VLITT++ A
Sbjct: 273 QAMIFCQTRRSADWLSVKMIQDGHQVAMLTAELSIVQRADVIQRFRDGKEKVLITTNVCA 332
Query: 297 RGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
RGIDV QV++V+N+ LP QP E YLHRIGR+GRFG++G+A N V ++ I
Sbjct: 333 RGIDVAQVTIVVNFGLPINRQKQPDFETYLHRIGRTGRFGKRGIAFNMVDSHSAHLVRCI 392
Query: 351 QKFYNVVIEELPSNVADLL 369
++ + I+ L + D L
Sbjct: 393 EEHFQTKIKRLDPDCMDKL 411
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 137/343 (39%), Positives = 207/343 (60%)
Query: 35 DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGV 93
++I Q+QSGTGKTA F +L +++ Q L L+PT ELA Q KV+ +G Y +
Sbjct: 101 NLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 160
Query: 94 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLS 152
K+ V G + Q+I + +V+GTPG V D + + + P IK+FVLDEAD M++
Sbjct: 161 KLAYAVRGNKLERGQKISE---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIA 217
Query: 153 -RGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 211
+G +DQ I ++LP Q+ +FSAT + +K + P I +KR+E TL+ IKQ
Sbjct: 218 TQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQ 277
Query: 212 FYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 271
+YV + K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M
Sbjct: 278 YYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMV 337
Query: 272 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGR 325
R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR
Sbjct: 338 EQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR 397
Query: 326 SGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 367
+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D
Sbjct: 398 TGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 440
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 119/163 (73%), Positives = 133/163 (81%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDI 162
GTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDI
Sbjct: 121 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI 163
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 139/374 (37%), Positives = 215/374 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 70 LSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILE 128
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 129 NYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 187
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 188 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 247
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P ++M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 248 PEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSK 307
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + S+ G+M+QN R M + + RVLI+T
Sbjct: 308 VPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLIST 367
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+ I
Sbjct: 368 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIA 427
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 428 QKCNINLLPLPDPI 441
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 139/374 (37%), Positives = 215/374 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 69 LSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILE 127
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 128 NYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 186
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 187 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 246
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P ++M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 247 PEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSK 306
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + S+ G+M+QN R M + + RVLI+T
Sbjct: 307 IPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLIST 366
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+ I
Sbjct: 367 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIA 426
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 427 QKCNINLLPLPDPI 440
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 139/374 (37%), Positives = 217/374 (58%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 76 LSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLE 134
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 135 NLSTQILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 193
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 194 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 253
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P K+M +P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 254 PEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQELFSK 313
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + S+ G+M+QN R M + + RVLI+T
Sbjct: 314 IPFNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCRVLIST 373
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+ I
Sbjct: 374 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIA 433
Query: 352 KFYNVVIEELPSNV 365
+ ++ + LP +
Sbjct: 434 QKCHINLLLLPDPI 447
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 140/366 (38%), Positives = 208/366 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD--Y 60
L +L I G+ KP+AIQQ+ I G D+I AQ+GTGKTA+F +L+QL+ Y
Sbjct: 8 LSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQY 67
Query: 61 ---G----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA 113
G + +AL+L PTRELA Q+E + YL + A GG +E ++ L
Sbjct: 68 KETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRLIW 127
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
GV ++V TPGR+ DM ++ L D + M VLDEAD ML GF D I I + LP Q
Sbjct: 128 GVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNL 187
Query: 174 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
+FSATM E + ++ ++KPV I + D+ + I+Q+ V V+K K L + T
Sbjct: 188 LFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKAN-KSALLSHIITTQ 246
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 293
Q++IF+ T+ L ++ R + H Q+ R+ I+ +F+SG + L+ T
Sbjct: 247 NWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATA 306
Query: 294 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 353
+ ARG+D+ ++S VINYDLP Q ++Y+HRIGR+GR G G AI+ V++D+ R L I+
Sbjct: 307 IAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFRELCAIESR 366
Query: 354 YNVVIE 359
+IE
Sbjct: 367 LGHIIE 372
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 131/356 (36%), Positives = 204/356 (57%)
Query: 7 LLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ-LDYGLVQC 65
++ G+ A G+++P+ IQ + I P +G DVI AQ+GTGKTA + ++Q+ L +
Sbjct: 12 VMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQKMLSTPRGRV 71
Query: 66 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 125
+ LVLAPTRELA QI + R+LG ++ + GG ++ + R L++GV VVV PGR+
Sbjct: 72 RTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRL 131
Query: 126 FDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALE 185
D + R ++ ++ ++DEAD M GF+ I I + L Q +FSATMPPE +
Sbjct: 132 LDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRK 191
Query: 186 ITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTR 245
+T + PV I + + + V+ + K L ++ +T +IF T+
Sbjct: 192 LTLETQTNPVTIQIGT-QAPASSVSHSVYPVKNHQ-KTPLLIEILKTTETKSVLIFARTK 249
Query: 246 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 305
+ L D++ T ++ G++ QN R +M FR G+ ++L+ TD+ ARG+D+ +S
Sbjct: 250 YGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHIS 309
Query: 306 LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
VINYD+P PE+Y HRIGR+GRF R G A++ VT D M+ DIQK N I+ L
Sbjct: 310 HVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRDIQKLINSPIQRL 365
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 134/363 (36%), Positives = 206/363 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL L + + G++ PS IQ + I G DV+ AQ+GTGKTA F +L+ L
Sbjct: 6 LGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAK 65
Query: 61 GLV----QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
G Q +ALVL PTRELA Q+ + + G YL ++ GG + L+ GV
Sbjct: 66 GHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
V+V TPGR+ D++++ +++ + +++ VLDEAD ML GF I I LLPAK Q +FS
Sbjct: 126 VLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT E E+ + +N PV I V +KQ+ V+K + K L L +
Sbjct: 186 ATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQ-KSALLIQLIKQENWQ 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q ++F T+ + L + + + +A HG+ Q R + +F+SG RVL+ TD+ A
Sbjct: 245 QVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAA 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RG+D+ Q+ V+N+DLP PE+Y+HRIGR+GR G G A++ V+ ++ ++L DI++ N
Sbjct: 305 RGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIERLINR 364
Query: 357 VIE 359
V+E
Sbjct: 365 VLE 367
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 138/374 (36%), Positives = 215/374 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 71 LSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLE 129
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 130 NQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 188
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 189 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 248
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P K+M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 249 PEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSR 308
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + ++ G+M+QN R M + + RVLI+T
Sbjct: 309 IPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLIST 368
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E ++ I
Sbjct: 369 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIA 428
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 429 QKCNINLLPLPDPI 442
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 138/374 (36%), Positives = 215/374 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 71 LSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLE 129
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 130 NQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 188
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 189 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 248
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P K+M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 249 PEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSR 308
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L D + ++ G+M+QN R M + + RVLI+T
Sbjct: 309 IPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLIST 368
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E ++ I
Sbjct: 369 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIA 428
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 429 QKCNINLLPLPDPI 442
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 139/376 (36%), Positives = 216/376 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 69 LSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILE 127
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 128 NYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVG 186
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L P I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 187 SPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATY 246
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFY--VN----VEKE-EWKLETLCDLYET 232
P ++M P + + + +L G+KQ+Y VN K E K + L +L+
Sbjct: 247 PEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSK 306
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT--HGDMDQNTRDIIMREFRSGSSRVLI 290
+ Q+++F N + L D + S+ +G+M+QN R M + + RVLI
Sbjct: 307 IPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFHCRVLI 366
Query: 291 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFD 349
+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M+
Sbjct: 367 STDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMK 426
Query: 350 IQKFYNVVIEELPSNV 365
I + N+ + LP +
Sbjct: 427 IAQKCNINLLPLPDPI 442
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 130/360 (36%), Positives = 202/360 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L N++ + A G+E+PSAIQQ+ I G D+I QAQ+GTGKTA F IL ++D
Sbjct: 13 LHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDPSK 72
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ QAL+LAPTRELA Q+ + GV V A GG + + ++ G +VV T
Sbjct: 73 REPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQIVVAT 132
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D LRR + VLDEADEML GF D + IF+ +P Q +FSAT+P
Sbjct: 133 PGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSATLPQ 192
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
I + + P + ++ T+ I+Q ++ V ++ K + L E ++F
Sbjct: 193 SIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQ-KTSAVLSLLEVEDFDALIMF 251
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
V T++ L + ++ + +A +GD+ QN R+ ++ + G +++ TD+ ARG+DV
Sbjct: 252 VRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAARGLDV 311
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
+++ V N D+P PE+Y+HRIGR+GR GR+G A+ VT + RML I++ + E+
Sbjct: 312 PRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKVAEV 371
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 129/357 (36%), Positives = 206/357 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + + +++
Sbjct: 11 LSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEE 70
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QALVL PTRELA Q+++ + +G + +K A G + + L+ H+VVGTP
Sbjct: 71 NKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTP 130
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D + + +L + +K V+DEADEML+ GF DQ+ I LP K +FSAT+P +
Sbjct: 131 GRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPED 190
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS-VIF 241
++R +MN P I +K +T + I+ V +EE KL L D+ T+ S +IF
Sbjct: 191 VERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENPDSCIIF 248
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
T+ VD + ++ ++ HG M Q R +M +FR G R L+ TD+ ARGID+
Sbjct: 249 CRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDI 308
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
++ VINYD+P + E+Y+HR GR+GR G G AI F+T ++R L +I+ + I
Sbjct: 309 DNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIGFAI 365
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 129/357 (36%), Positives = 206/357 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + + +++
Sbjct: 11 LSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEE 70
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 122
+ QALVL PTRELA Q+++ + +G + +K A G + + L+ H+VVGTP
Sbjct: 71 NKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTP 130
Query: 123 GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPE 182
GRV D + + +L + +K V+DEADEML+ GF DQ+ I LP K +FSAT+P +
Sbjct: 131 GRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPED 190
Query: 183 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS-VIF 241
++R +MN P I +K +T + I+ V +EE KL L D+ T+ S +IF
Sbjct: 191 VERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENPDSCIIF 248
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
T+ VD + ++ ++ HG M Q R +M +FR G R L+ TD+ ARGID+
Sbjct: 249 CRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDI 308
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
++ VINYD+P + E+Y+HR GR+GR G G AI F+T ++R L +I+ + I
Sbjct: 309 DNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIGFAI 365
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 130/360 (36%), Positives = 204/360 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+G+ E + G + + IQ++ I G D+I QA++GTGKT F IL+++D
Sbjct: 10 LGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDP 69
Query: 61 GLVQCQALVLAPTRELAQQIE-KVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
QAL++APTRELA QI ++ + L + V A GG V + R L+ H+VV
Sbjct: 70 ESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVV 129
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ D +RR+++ + VLDEAD+ML GF I DI P Q +FSAT+
Sbjct: 130 ATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATI 189
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + ++ +++M++P I V+ +E+T++ I+Q + + K + L + + +V
Sbjct: 190 PKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMDRDQPFLAV 248
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI TD+ ARG+
Sbjct: 249 IFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGL 308
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV DE+ L +I+K I+
Sbjct: 309 DVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQ 368
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 130/360 (36%), Positives = 204/360 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+G+ E + G + + IQ++ I G D+I QA++GTGKT F IL+++D
Sbjct: 10 LGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDP 69
Query: 61 GLVQCQALVLAPTRELAQQIE-KVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
QAL++APTRELA QI ++ + L + V A GG V + R L+ H+VV
Sbjct: 70 ESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVV 129
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ D +RR+++ + VLDEAD+ML GF I DI P Q +FSAT+
Sbjct: 130 ATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATI 189
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + ++ +++M++P I V+ +E+T++ I+Q + + K + L + + +V
Sbjct: 190 PKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMDRDQPFLAV 248
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI TD+ ARG+
Sbjct: 249 IFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGL 308
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV DE+ L +I+K I+
Sbjct: 309 DVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQ 368
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 130/347 (37%), Positives = 201/347 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ +LR + + G+ + + IQ + G DVI +A++G+GKTA F G+L +LD
Sbjct: 11 LKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALS 70
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ QALVL PTRELA Q+ K +R L + +K+ GG L+ G HVV+GT
Sbjct: 71 FRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGT 130
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D LRR SL ++ VLDEAD ML GF+D I + P K Q +FSAT P
Sbjct: 131 PGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFSATYPD 190
Query: 182 EALEITRKFMNKPVRILVKRDELTLEG-IKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
++ +PV + V DE+ EG I+Q + V+ + ++E + + ++I
Sbjct: 191 SIAAMSAGVQREPVEVSV--DEVHGEGAIEQVFYEVDSGQ-RIEAVERILGHYRPESALI 247
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F NT+ + + + + R + A HGD+DQ RD ++ F + S+ VL+ TD+ ARG+D
Sbjct: 248 FCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLD 307
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 347
++++S VINY+L PE + HRIGR+GR G +G+A++ VT + R++
Sbjct: 308 IKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLI 354
>UNIPROTKB|E9PR46 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 IPI:IPI00984425 Ensembl:ENST00000526875
ArrayExpress:E9PR46 Bgee:E9PR46 Uniprot:E9PR46
Length = 407
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 146/376 (38%), Positives = 217/376 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLD 59
L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 48 LKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 106
Query: 60 YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
+ Q L LAPT ELA Q +V+ +G + CV D +++ A +
Sbjct: 107 ALELFPQCLCLAPTYELALQTGRVVEQMGKF-------CV-------DVQVMYA----IR 148
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPAKVQVGVFSAT 178
G F L+ L I++FVLDEAD M+ ++GF D I + LP++ Q+ +FSAT
Sbjct: 149 GNRNWCFK-LKLIDLTK--IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSAT 205
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
+ + P I ++++ELTL I+Q+YV E + K + LC++Y ++ I Q+
Sbjct: 206 FEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQA 265
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
+IF TRR WLT +M H VS G++ R I++ FR G +VLITT++ ARG
Sbjct: 266 IIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARG 325
Query: 299 IDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
IDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+ L IQ
Sbjct: 326 IDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQD 385
Query: 353 FYNVVIEELPSNVADL 368
+N I++L N D+
Sbjct: 386 HFNSSIKQL--NAEDM 399
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 133/366 (36%), Positives = 199/366 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L+ LL + GF + IQ + + KG DVI Q ++G+GKTA F G+L L+
Sbjct: 9 LNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSNLNV 68
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
+ QALVL PTRELA Q+ +R LG + +KV GG + L+ G H++V
Sbjct: 69 KRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGAHILV 128
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGR+ D L + + + VLDEAD ML GF++ + I PA+ Q +FSAT
Sbjct: 129 GTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLFSATY 188
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P +I + + I V+ T I+Q++ VE + E L L T SV
Sbjct: 189 PASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALETLLLHHQPTSSV 247
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
+F NT+R+V + D + +V HGDM+Q RD + +F + S +L+ TD+ ARG+
Sbjct: 248 VFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAARGL 307
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
DV + V NYDL PE ++HRIGR+GR G KG+A +F + ++ + I ++ ++ IE
Sbjct: 308 DVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMDIAIE 367
Query: 360 ELPSNV 365
PS +
Sbjct: 368 --PSTL 371
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 130/368 (35%), Positives = 205/368 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+GL ++LR + G+ +P+ IQQ+ I +G D++ AQ+GTGKTA F +LQ L
Sbjct: 6 LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLIT 65
Query: 59 ----DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
G +AL+L PTRELA QI + +R YL ++ GG S+ L+ G
Sbjct: 66 RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGG 125
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
V V+V TPGR+ D+ + +++ D +++ VLDEAD ML GF I + LPAK Q +
Sbjct: 126 VDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLL 185
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT + + K ++ P+ I V R + + Q V+K+ K E L +
Sbjct: 186 FSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR-KRELLSHMIGKGN 244
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q ++F T+ + L +++ +A HG+ Q R + +F+SG RVL+ TD+
Sbjct: 245 WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDI 304
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 354
ARG+D++++ V+NY+LP PE+Y+HRIGR+GR G A++ V D+ ++L DI+K
Sbjct: 305 AARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLL 364
Query: 355 NVVIEELP 362
+E+P
Sbjct: 365 K---KEIP 369
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 130/374 (34%), Positives = 197/374 (52%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 61
GL EN+L+ + G+ P+ IQ+ I G DV AQ+GTGKTA F ++Q+L G
Sbjct: 10 GLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQRLSTG 69
Query: 62 LVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
+ + L+L PTRELA Q+ + G YL + + +GG S +E + +LQ GV V+
Sbjct: 70 RARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVDVL 129
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSAT 178
+ TPGR+ D R L ++ ++DEAD ML GF I I LPA Q +FSAT
Sbjct: 130 IATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLLFSAT 189
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLE--TLCDLYETLAIT 236
P + + + F P +I V R T E I QF V + + K L + E +
Sbjct: 190 FPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVIEATNVK 249
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
++F N + +VD + + H + HGD+ Q+ R ++ FR G ++L+ +D+ A
Sbjct: 250 NGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVASDVAA 309
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYN 355
RG+D+ V V N+ P + E+Y+HRIGR+GR GR G + VT DD+ F ++
Sbjct: 310 RGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKSWGFVVKMIKK 369
Query: 356 VVIEELPSNVADLL 369
V E +P + + L
Sbjct: 370 DVPEFMPEGLLEEL 383
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 132/374 (35%), Positives = 213/374 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+ L E +++G+ GF + IQ++ + G DV QAQ+GTGKTA F + +L
Sbjct: 6 LNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTKLLR 65
Query: 59 -DYGLVQC--QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 115
G + +A++LAPTREL QIEK + LG + G + A GG + + L+ G
Sbjct: 66 SGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALKEGA 125
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPA--KVQVG 173
VVVGTPGR+ D L+++ I+M V+DEAD M GF + I + LP K Q
Sbjct: 126 DVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKRQNL 185
Query: 174 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
+FSAT+ +E+ +FMN P ++ V +++T E ++Q +V ++E K L L
Sbjct: 186 MFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKE-KFPLLLGLLRKE 244
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 293
+ +++IFVNT+R+ ++L +++ + D GD++Q R I+ +F+SG ++I TD
Sbjct: 245 GMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATD 304
Query: 294 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 353
+ +RG+ + VS VINYDLP E+Y+HRIGR+ R G +G AI+ DE F ++
Sbjct: 305 VASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMA---DEDGAFHLEAI 361
Query: 354 YNVVIEELPSNVAD 367
+ + +++P A+
Sbjct: 362 HEYIKDKIPVEWAE 375
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 134/376 (35%), Positives = 203/376 (53%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD- 59
+GL E LL+ + G+E PS IQ + I G DV+ AQ+GTGKTA F +LQ+L
Sbjct: 11 LGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQRLSS 70
Query: 60 -----YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
+AL+L PTRELA QI + + G YL + GG + L+ G
Sbjct: 71 SKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARLRQG 130
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
V V+V TPGR+ D+ +++++ +++F+LDEAD ML GF I + LP Q +
Sbjct: 131 VDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQNLL 190
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT PE + + +N P+ I V + T E + Q+ V+K+ K L L +
Sbjct: 191 FSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKR-KPAVLTHLIKENN 249
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q ++F T+ + LT + + T +A HG+ Q R + F+ GS ++L+ TD+
Sbjct: 250 WQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVATDI 309
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI---- 350
ARGID+ + V+N+DLP PE+Y+HRIGR+ R G G A++ V D+ +L+ I
Sbjct: 310 AARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADELDLLWGIEHVI 369
Query: 351 -QKFYNVVIEE-LPSN 364
Q VIE+ +P+N
Sbjct: 370 QQHIERKVIEKFIPAN 385
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 134/374 (35%), Positives = 210/374 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 28 LSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDALLLD 86
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ +G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 87 SPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-CHIAVG 145
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSATM 179
+PGR+ ++ L I++F+LDEAD++L G F++QI I+ LPA Q+ SAT
Sbjct: 146 SPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSATY 205
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKE-------EWKLETLCDLYET 232
P +M +P + + + +L G+KQ+Y V E K + L +L+
Sbjct: 206 PESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSK 265
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
+ Q+++F N + L + + SR G M+Q+ R M + + RVLI+T
Sbjct: 266 IPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLIST 325
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQ 351
DL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R ++E M+ I
Sbjct: 326 DLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMKIA 385
Query: 352 KFYNVVIEELPSNV 365
+ N+ + LP +
Sbjct: 386 QKCNLQLLPLPEPI 399
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 134/373 (35%), Positives = 210/373 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQQL +
Sbjct: 12 LDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQL-ISV 70
Query: 63 VQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
C+ ALVL PTRELAQQ+ K G + V + GG S ++ L+ GV ++
Sbjct: 71 QPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDIL 130
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSAT 178
+ TPGR+ D+LR +S+ I+ V DEAD ML GFK++I I Q LP Q +FSAT
Sbjct: 131 IATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSAT 190
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
+ ++++ + +P + + + ++Q V+ + K E L + Q
Sbjct: 191 FADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGSRNWKQV 249
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
++F T++ D L +M ++D S A HGD Q R+ + EF+ G R LI TD+ AR
Sbjct: 250 LVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAAR 308
Query: 298 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV- 356
GID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ +E +L I++ ++
Sbjct: 309 GIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDIQ 368
Query: 357 VIEE-LPSNVADL 368
++++ LP DL
Sbjct: 369 LLQQWLPGYELDL 381
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 134/373 (35%), Positives = 210/373 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQQL +
Sbjct: 12 LDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQL-ISV 70
Query: 63 VQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
C+ ALVL PTRELAQQ+ K G + V + GG S ++ L+ GV ++
Sbjct: 71 QPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDIL 130
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSAT 178
+ TPGR+ D+LR +S+ I+ V DEAD ML GFK++I I Q LP Q +FSAT
Sbjct: 131 IATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSAT 190
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
+ ++++ + +P + + + ++Q V+ + K E L + Q
Sbjct: 191 FADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGSRNWKQV 249
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
++F T++ D L +M ++D S A HGD Q R+ + EF+ G R LI TD+ AR
Sbjct: 250 LVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAAR 308
Query: 298 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV- 356
GID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ +E +L I++ ++
Sbjct: 309 GIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDIQ 368
Query: 357 VIEE-LPSNVADL 368
++++ LP DL
Sbjct: 369 LLQQWLPGYELDL 381
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 142/384 (36%), Positives = 213/384 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+ L + L + G IQ+ +VP +G D+I +A++GTGKT F I+++L
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 59 ---DYGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 109
DY + LVLAPTRELA+Q+EK ++ YL CV GG S Q
Sbjct: 167 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQS 223
Query: 110 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAK 169
L GV VVVGTPGR+ D++ +SL+ ++ VLDEAD+ML+ GF++ + I + LP K
Sbjct: 224 ALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTK 283
Query: 170 VQVGVFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFYVNVEKEEWKLETLC 227
Q +FSATMP ++ RK+++ P+ I LV +DE EGIK + + K L
Sbjct: 284 RQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTS-KRTILS 342
Query: 228 DLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 286
DL A ++++F T+R D ++ + S A HGD+ Q+ R+ + FR G
Sbjct: 343 DLITVYAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKF 401
Query: 287 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 346
VL+ TD+ +RG+D+ V LVI+Y+LP PE ++HR GR+GR G++G AI T +R
Sbjct: 402 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRT 461
Query: 347 LFDIQKFYNVVIEEL-PSNVADLL 369
+ +++ E + P V DLL
Sbjct: 462 VRSLERDVGCHFEFISPPTVGDLL 485
>RGD|735141 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
Genevestigator:Q812C4 Uniprot:Q812C4
Length = 138
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 105/138 (76%), Positives = 122/138 (88%)
Query: 142 FVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKR 201
FVLDEADEMLSRGFKDQIYDIFQ L + QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 1 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 60
Query: 202 DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 261
+ELTLEGI+QFY+NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 61 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 120
Query: 262 VSATHGDMDQNTRDIIMR 279
VSA HGDMDQ RD+IMR
Sbjct: 121 VSAMHGDMDQKERDVIMR 138
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 134/377 (35%), Positives = 214/377 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L + +L G+ A GF++PS IQ + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 61 LSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALDSLILE 119
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q LVLAPTRE+A QI V+ A+G + G++ H +GG + +D++ L+ H+ +G
Sbjct: 120 NATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-CHIAIG 178
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEML----SRGFKDQIYDIFQLLPAKVQVGVFS 176
+PGR+ ++ +L I++FVLDEAD++L S F++QI I+ LPA Q+ S
Sbjct: 179 SPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQMLALS 238
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKE-------EWKLETLCDL 229
AT P + ++M +P + + + L G+KQ+Y V E K+++L +L
Sbjct: 239 ATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQSLLEL 298
Query: 230 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 289
+ + Q+++F N + L D + S+ G + Q+ R M + + RVL
Sbjct: 299 FSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVL 358
Query: 290 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLF 348
I+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG GVA+ + ++E +
Sbjct: 359 ISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEEENKMM 418
Query: 349 DIQKFYNVVIEELPSNV 365
I + ++ + LP +
Sbjct: 419 AIAQKCSLDLMHLPDPI 435
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 130/363 (35%), Positives = 206/363 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL++L
Sbjct: 6 LGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQ 65
Query: 61 GLVQ----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
G Q +AL+L PTRELA Q+ + + G G+K A GG + ++ L GV
Sbjct: 66 GQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
V+V TPGR+ D+ ++++ + I+M VLDEAD ML GF + I I LP++VQ +FS
Sbjct: 126 VLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT+ + E+ + + P I + ++ + I Q+ + V+K+ K L L
Sbjct: 186 ATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINEQQWD 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF+ T+ L ++ R A H Q R ++ +F+SG + L+ T + A
Sbjct: 245 QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAA 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 305 RGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGH 364
Query: 357 VIE 359
+IE
Sbjct: 365 LIE 367
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 131/364 (35%), Positives = 203/364 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL LL + + +P+ IQ R I G D+I A +G+GKTATF +LQ+L
Sbjct: 13 LGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQKLRE 72
Query: 61 GLVQ---------CQALVLAPTRELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQR 109
+ LVL PTRELA+Q+ +++ + +K A GG SV
Sbjct: 73 DISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVNIQML 132
Query: 110 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAK 169
L+ GV ++V TPGR+ D++ +++ D +K VLDEAD MLS GF +++ + L P K
Sbjct: 133 ALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTPKK 192
Query: 170 VQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLETLCD 228
Q +FSAT P + +T++ +N P+ I L D TL +++ + V K E K L
Sbjct: 193 KQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTL--VQRVFT-VNKGE-KTAVLAH 248
Query: 229 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 288
L + Q++IFVN + + L +K+ R T + HGD Q+ R ++ F++G V
Sbjct: 249 LIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEV 308
Query: 289 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 348
LI TD+ ARG+D++++ +VIN++LP P +Y+HRIGRSGR G G+AI+ + +D
Sbjct: 309 LIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDHEDYHHFS 368
Query: 349 DIQK 352
I+K
Sbjct: 369 VIEK 372
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 128/362 (35%), Positives = 205/362 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD--- 59
L ++L+ + A G+ +P+ +Q + + +D++ AQ+GTGKTA F LQ+L
Sbjct: 8 LAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQRLSSPP 67
Query: 60 YGLVQC-QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 118
G + + LVL PTRELAQQ+ +R G ++ V+ A +GG R+L A V +
Sbjct: 68 QGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLSAPVDFI 127
Query: 119 VGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSAT 178
V TPGR+ D+L R+SL +++ VLDEAD ML GF D + I PA Q +F+AT
Sbjct: 128 VATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQTLLFTAT 187
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
M + + + +P RI + + T E I+Q + K L L ++ ++
Sbjct: 188 MDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLITDESLRRA 247
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
+IF T+R + L +++++ H+ +A HGDM QN R+ + + G R+L+ TD+ ARG
Sbjct: 248 IIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATDVAARG 307
Query: 299 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 358
+DV +S VIN+DLP E+Y+HRIGR+GR G G+AI+F + ++ L I+++ +
Sbjct: 308 LDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARIERYIGQTL 367
Query: 359 EE 360
E
Sbjct: 368 PE 369
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 140/373 (37%), Positives = 197/373 (52%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L +L+ I G+E P+ IQ I P +G DV+ AQ+GTGKTA+F ++ L
Sbjct: 7 LNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITLLAR 66
Query: 61 GLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 117
G + + +LVL PTRELA Q+ + +L + +GG S +E ++ GV V
Sbjct: 67 GRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRGVDV 126
Query: 118 VVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSA 177
++ TPGR+ D R L +++ V+DEAD ML GF I IF L P Q FSA
Sbjct: 127 LIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSA 186
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYV-------NVEKEEWK--LETLCD 228
TM PE IT F++ P RI V R E I+Q V + E E + L L D
Sbjct: 187 TMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRALID 246
Query: 229 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 288
E T ++IF N + VD + ++ + + HGD+DQ+ R + FR G R+
Sbjct: 247 A-EGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGKLRL 305
Query: 289 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 348
L+ +D+ ARG+DV VS V N+D+P PE+Y+HRIGR+GR GR G AI DE+ L
Sbjct: 306 LVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEKALD 365
Query: 349 DIQKFYNVVIEEL 361
I+K I L
Sbjct: 366 AIEKLIQKDIPRL 378
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 130/363 (35%), Positives = 206/363 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL++L
Sbjct: 6 LGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQ 65
Query: 61 GLVQ----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
G Q +AL+L PTRELA Q+ + + G G+K A GG + ++ L GV
Sbjct: 66 GQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
V+V TPGR+ D+ ++++ + I+M VLDEAD ML GF + I I LP++VQ +FS
Sbjct: 126 VLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT+ + E+ + + P I + ++ + I Q+ + V+K+ K L L
Sbjct: 186 ATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINEQQWD 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF+ T+ L ++ R A H Q R ++ +F+SG + L+ T + A
Sbjct: 245 QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAA 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 305 RGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGH 364
Query: 357 VIE 359
+IE
Sbjct: 365 LIE 367
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 132/361 (36%), Positives = 202/361 (55%)
Query: 15 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--------GLVQCQ 66
G+ P+ +Q I G DV+ A +G+GKTA F +LQ+L G+V+C
Sbjct: 28 GYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRC- 86
Query: 67 ALVLAPTRELAQQI-EKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGTPGR 124
LVL PTRELAQQ+ + + + G +K+ A GG SV + L+AG V+V TPGR
Sbjct: 87 -LVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGR 145
Query: 125 VFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEAL 184
+ D+L +L+ + FVLDEAD MLS GF +++ + LP + Q +FSAT P E
Sbjct: 146 LLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVR 205
Query: 185 EITRKFMNKPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVN 243
+T K +++P+ L E T+E Q + V +E+ K L L + +Q++IFV+
Sbjct: 206 ALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTALLAHLIKQHQWSQALIFVS 261
Query: 244 TRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQ 303
+ + L K+ R + HGD Q R ++ F++G VLI TD+ ARGID+ +
Sbjct: 262 AKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDK 321
Query: 304 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV--VIEEL 361
+ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++ I+K + V E++
Sbjct: 322 LPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHFGVIEKKNKIKLVREQI 381
Query: 362 P 362
P
Sbjct: 382 P 382
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 132/361 (36%), Positives = 202/361 (55%)
Query: 15 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--------GLVQCQ 66
G+ P+ +Q I G DV+ A +G+GKTA F +LQ+L G+V+C
Sbjct: 28 GYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRC- 86
Query: 67 ALVLAPTRELAQQI-EKVMRALGDYLG-VKVHACVGGTSVREDQRILQAGVHVVVGTPGR 124
LVL PTRELAQQ+ + + + G +K+ A GG SV + L+AG V+V TPGR
Sbjct: 87 -LVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGR 145
Query: 125 VFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEAL 184
+ D+L +L+ + FVLDEAD MLS GF +++ + LP + Q +FSAT P E
Sbjct: 146 LLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVR 205
Query: 185 EITRKFMNKPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVN 243
+T K +++P+ L E T+E Q + V +E+ K L L + +Q++IFV+
Sbjct: 206 ALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTALLAHLIKQHQWSQALIFVS 261
Query: 244 TRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQ 303
+ + L K+ R + HGD Q R ++ F++G VLI TD+ ARGID+ +
Sbjct: 262 AKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDK 321
Query: 304 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV--VIEEL 361
+ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++ I+K + V E++
Sbjct: 322 LPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHFGVIEKKNKIKLVREQI 381
Query: 362 P 362
P
Sbjct: 382 P 382
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 132/360 (36%), Positives = 201/360 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKTA F +LQ+L
Sbjct: 15 LGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74
Query: 61 GLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 112
Q AL+L PTRELA Q+ + +RA G YL +K GG S++ L+
Sbjct: 75 SRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLR 134
Query: 113 AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 172
GV ++V TPGR+ D++ + L ++ FVLDEAD ML GF I I +LLP Q
Sbjct: 135 RGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQN 194
Query: 173 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 232
+FSAT E E+T K ++ P I V R I V+++ K E L + +
Sbjct: 195 LLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR-KRELLSFMIGS 253
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
Q ++F T+ + L+ ++ S + +A HG+ Q R + +F+ G RVL+ T
Sbjct: 254 KNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVAT 313
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
D+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V+ D+ R+L DI+K
Sbjct: 314 DVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEK 373
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 132/360 (36%), Positives = 201/360 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKTA F +LQ+L
Sbjct: 15 LGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74
Query: 61 GLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 112
Q AL+L PTRELA Q+ + +RA G YL +K GG S++ L+
Sbjct: 75 SRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLR 134
Query: 113 AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 172
GV ++V TPGR+ D++ + L ++ FVLDEAD ML GF I I +LLP Q
Sbjct: 135 RGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQN 194
Query: 173 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 232
+FSAT E E+T K ++ P I V R I V+++ K E L + +
Sbjct: 195 LLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR-KRELLSFMIGS 253
Query: 233 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 292
Q ++F T+ + L+ ++ S + +A HG+ Q R + +F+ G RVL+ T
Sbjct: 254 KNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVAT 313
Query: 293 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
D+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V+ D+ R+L DI+K
Sbjct: 314 DVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEK 373
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 138/385 (35%), Positives = 222/385 (57%)
Query: 1 MGLQENLLRGIYA-YGFEKPSAIQQRGI----VPFCKGLDVIQQAQSGTGKTATFCSGIL 55
+ L L++G+Y FEKPS IQ + P K L I QA +G+GKT F G+L
Sbjct: 96 LNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHL--IAQAHNGSGKTTCFVLGML 153
Query: 56 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS--VREDQRILQA 113
++D L + QAL + PTRELA Q +V++ +G + G+ V ++ R
Sbjct: 154 SRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPV 213
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQ----IYDIFQLLPA 168
HVV+GTPG + + + L +++K+ V DEAD ML+ GF+D + DI ++ P
Sbjct: 214 SAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNP- 272
Query: 169 KVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCD 228
QV +FSAT + + + P ++ VKR++L L+ +KQ+ V KE+ K+E + D
Sbjct: 273 NFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKD 332
Query: 229 -LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 287
+ E I Q++IFV T+ + + + V++ HG++ ++ RD I++EF+ ++
Sbjct: 333 QIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQ 392
Query: 288 VLITTDLLARGIDVQQVSLVINYDLPT-----QP--ENYLHRIGRSGRFGRKGVAINFVT 340
VLI TD++ARG D Q+V+LV+NY+LPT +P E YLHR+GR+GRFGRKG N +
Sbjct: 393 VLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLL 452
Query: 341 RD--DERMLFDIQKFYNVVIEELPS 363
D D+ ++ I+K++ ++E+ S
Sbjct: 453 DDGWDKEVMEKIEKYFEANVKEIKS 477
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 134/376 (35%), Positives = 210/376 (55%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLDYG 61
L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L L
Sbjct: 12 LSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDALLLD 70
Query: 62 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVG 120
Q L+LAPTRE+A QI V+ +G + G++ H +GGT + +D+ L+ H+ VG
Sbjct: 71 SPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-CHIAVG 129
Query: 121 TP--GRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG-FKDQIYDIFQLLPAKVQVGVFSA 177
+P GR+ ++ L I++F+LDEAD++L G F++QI I+ LPA Q+ SA
Sbjct: 130 SPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSA 189
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKE-------EWKLETLCDLY 230
T P +M +P + + + +L G+KQ+Y V E K + L +L+
Sbjct: 190 TYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELF 249
Query: 231 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 290
+ Q+++F N + L + + SR G M+Q+ R M + + RVLI
Sbjct: 250 SKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLI 309
Query: 291 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFD 349
+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R ++E M+
Sbjct: 310 STDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMK 369
Query: 350 IQKFYNVVIEELPSNV 365
I + N+ + LP +
Sbjct: 370 IAQKCNLQLLPLPEPI 385
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 132/360 (36%), Positives = 191/360 (53%)
Query: 7 LLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQC- 65
+LR I G++K + IQQ+ I +G DV+ AQ+GTGKTA F ILQ++ +
Sbjct: 12 ILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMVENPSETL 71
Query: 66 ----QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ L+L PTRELA Q+ + + A YL V GG V + L+ G ++V T
Sbjct: 72 KSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVAT 131
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ + L +L + VLDEAD ML GF I I Q + K Q +FSAT
Sbjct: 132 PGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQNLLFSATFSS 191
Query: 182 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIF 241
++ + M KP I + T + + Q VE+ K E L +L Q ++F
Sbjct: 192 AVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRR-KRELLSELIGKKNWQQVLVF 250
Query: 242 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 301
TR D L ++ HG+ Q +R +REF SG RVL+ T++ ARG+D+
Sbjct: 251 TATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARGLDI 310
Query: 302 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
+ V+N+DLP E+Y+HRIGR+GR G+ GVAI+FV+R++ER L DI+K I +
Sbjct: 311 PSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQKIRRI 370
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 126/324 (38%), Positives = 186/324 (57%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVG 120
Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVG
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATM 179
TPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 180 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS 238
E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 239 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 298
VIFV + ++ L + ++ A H M Q R ++F+ R+L+ T+L RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 299 IDVQQVSLVINYDLPTQPENYLHR 322
+D+++V++ NYD+P + YLHR
Sbjct: 351 MDIERVNIAFNYDMPEDSDTYLHR 374
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 122/357 (34%), Positives = 197/357 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ---- 56
+ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 6 LSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMA 65
Query: 57 --QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
Q D+ +ALVL PTRELA Q+++ ++V GG S+ Q + AG
Sbjct: 66 DNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAG 125
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +PA+ Q +
Sbjct: 126 IDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLL 185
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT+ ++ + P RI V + T I+Q ++ + K E + L +
Sbjct: 186 FSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLVRSKN 244
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q +IF T++ VD LT ++ + HGD+ Q R+ +++EF+ G +VL+ TD+
Sbjct: 245 WQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDV 304
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 351
ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L +++
Sbjct: 305 AARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVE 361
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 122/357 (34%), Positives = 197/357 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ---- 56
+ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 6 LSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMA 65
Query: 57 --QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
Q D+ +ALVL PTRELA Q+++ ++V GG S+ Q + AG
Sbjct: 66 DNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAG 125
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +PA+ Q +
Sbjct: 126 IDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLL 185
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT+ ++ + P RI V + T I+Q ++ + K E + L +
Sbjct: 186 FSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLVRSKN 244
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q +IF T++ VD LT ++ + HGD+ Q R+ +++EF+ G +VL+ TD+
Sbjct: 245 WQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDV 304
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 351
ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L +++
Sbjct: 305 AARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVE 361
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 122/316 (38%), Positives = 187/316 (59%)
Query: 55 LQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQA 113
LQQL+ Q LV+ TRELA QI K Y+ VKV GG S+++D+ +L+
Sbjct: 4 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKK 63
Query: 114 GV-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQ 171
H+VVGTPGR+ + R +SL +IK F+LDE D+ML + + + +IF++ P + Q
Sbjct: 64 NCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ 123
Query: 172 VGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLY 230
V +FSAT+ E + RKFM P+ I V + +LTL G++Q+YV ++ E K L DL
Sbjct: 124 VMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLL 182
Query: 231 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 290
+ L Q VIFV + ++ L + ++ A H M Q R ++F+ R+L+
Sbjct: 183 DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILV 242
Query: 291 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFD 349
T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D
Sbjct: 243 ATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILND 302
Query: 350 IQKFYNVVIEELPSNV 365
+Q + V I ELP +
Sbjct: 303 VQDRFEVNISELPDEI 318
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 128/366 (34%), Positives = 202/366 (55%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L +LD
Sbjct: 8 LKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKR 67
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ Q LVL PTRELA Q+ + +R L + VKV GG + L+ G H++VGT
Sbjct: 68 FRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGT 127
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D L R L + M VLDEAD ML GF+ Q+ I + P + Q +FSAT P
Sbjct: 128 PGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPE 187
Query: 182 EALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
+ I ++ M PV + V ++ T+E + FY ++ ++ +++ L L +V
Sbjct: 188 QIQSIAKQIMYNPVMVKAAVTHEKNTIE--QHFY-QLDDDKSRMQALQLLLLEHKPESAV 244
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD+ ARG+
Sbjct: 245 VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGL 304
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN--VV 357
D+ + V NY + E ++HRIGR+GR G KG A F D + ++++ + +
Sbjct: 305 DIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREIT 364
Query: 358 IEELPS 363
E LPS
Sbjct: 365 SESLPS 370
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 128/366 (34%), Positives = 202/366 (55%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L+ LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L +LD
Sbjct: 8 LKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKR 67
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGT 121
+ Q LVL PTRELA Q+ + +R L + VKV GG + L+ G H++VGT
Sbjct: 68 FRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGT 127
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ D L R L + M VLDEAD ML GF+ Q+ I + P + Q +FSAT P
Sbjct: 128 PGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPE 187
Query: 182 EALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
+ I ++ M PV + V ++ T+E + FY ++ ++ +++ L L +V
Sbjct: 188 QIQSIAKQIMYNPVMVKAAVTHEKNTIE--QHFY-QLDDDKSRMQALQLLLLEHKPESAV 244
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD+ ARG+
Sbjct: 245 VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGL 304
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN--VV 357
D+ + V NY + E ++HRIGR+GR G KG A F D + ++++ + +
Sbjct: 305 DIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREIT 364
Query: 358 IEELPS 363
E LPS
Sbjct: 365 SESLPS 370
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 135/373 (36%), Positives = 208/373 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+G+ +++ + G EK IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 59 ---DYGLVQC-QALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 113
+G + Q LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
G+ V VGTPGR+ D+++R +L ++ VLDEAD+ML GF + + I Q LPAK Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 174 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 231
+FSATMP +T+K++N P+ I LV D+ +GI + + + + + L +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYG-RASIIGPLVK 356
Query: 232 TLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 290
+ ++F T+R D L + ++ + A HGD+ Q R+ + FR G+ +L+
Sbjct: 357 EHGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILV 415
Query: 291 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
TD+ ARG+DV V LVI+Y+LP E ++HR GR+GR G+KG AI +D R + I
Sbjct: 416 ATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMI 475
Query: 351 QKFYNVVIEELPS 363
+K ELPS
Sbjct: 476 EKEVGSRFNELPS 488
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 124/337 (36%), Positives = 195/337 (57%)
Query: 34 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-G 92
L +QQ + TG+ + +L + + V LV+ TRELA QI K Y+
Sbjct: 101 LATLQQLEPVTGQV--YLGRVLGR-GFWCVFVSVLVMCHTRELAFQISKEYERFSKYMPN 157
Query: 93 VKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML 151
VKV GG S+++D+ +L+ H+VVGTPGR+ + R +SL +IK F+LDE D+ML
Sbjct: 158 VKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKML 217
Query: 152 SR-GFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGI 209
+ + + +IF++ P + QV +FSAT+ E + RKFM P+ I V + +LTL G+
Sbjct: 218 EQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGL 277
Query: 210 KQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDM 269
+Q+YV ++ E K L DL + L Q VIFV + ++ L + ++ A H M
Sbjct: 278 QQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 336
Query: 270 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 329
Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRF
Sbjct: 337 PQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRF 396
Query: 330 GRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPSNV 365
G KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 397 GTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 433
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 51/126 (40%), Positives = 65/126 (51%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD--- 59
L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA F LQQL+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 60 ---Y-GLVQ-----C---QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 106
Y G V C LV+ TRELA QI K Y+ VKV GG S+++
Sbjct: 112 GQVYLGRVLGRGFWCVFVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 171
Query: 107 DQRILQ 112
D+ +L+
Sbjct: 172 DEEVLK 177
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 127/362 (35%), Positives = 199/362 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+ L
Sbjct: 6 LGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAK 65
Query: 61 G----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
G Q +AL+L PTRELA QI+ + G +L +K GG + + + G
Sbjct: 66 GPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGAD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
++V TPGR+ D+ + +++ D +++ VLDEAD ML GF I+ I +LLP K Q +FS
Sbjct: 126 ILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT E E+ + +N PV I V T ++Q + ++ K + L L +
Sbjct: 186 ATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEGNWQ 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q ++F+ T+ + L + + T +A HG+ Q R + +F++G R+L+ TD+ A
Sbjct: 245 QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAA 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + LF I++
Sbjct: 305 RGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERLTQA 364
Query: 357 VI 358
++
Sbjct: 365 LL 366
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 127/362 (35%), Positives = 199/362 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+ L
Sbjct: 6 LGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAK 65
Query: 61 G----LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
G Q +AL+L PTRELA QI+ + G +L +K GG + + + G
Sbjct: 66 GPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGAD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
++V TPGR+ D+ + +++ D +++ VLDEAD ML GF I+ I +LLP K Q +FS
Sbjct: 126 ILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT E E+ + +N PV I V T ++Q + ++ K + L L +
Sbjct: 186 ATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEGNWQ 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q ++F+ T+ + L + + T +A HG+ Q R + +F++G R+L+ TD+ A
Sbjct: 245 QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAA 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + LF I++
Sbjct: 305 RGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERLTQA 364
Query: 357 VI 358
++
Sbjct: 365 LL 366
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 133/373 (35%), Positives = 207/373 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 59
+G+ +++ + + G EK IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 60 YGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 113
Y + LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRQLDY 225
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
GV V VGTPGRV D+++R +L ++ VLDEAD+ML GF + + I + LP K Q
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 174 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFYVNVEKEEWKLETLCDLY- 230
+FSATMP +T+K++N P+ + LV D+ +GI + + + + + L
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI-IADSYGRASIIGPLVT 344
Query: 231 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 290
E + ++F T+R D L+ + +R A HGD+ Q+ R+ + FR G +L+
Sbjct: 345 EHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILV 403
Query: 291 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 350
TD+ ARG+DV V L+I+Y+LP E ++HR GR+GR G+KG AI ++D R + I
Sbjct: 404 ATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKII 463
Query: 351 QKFYNVVIEELPS 363
++ ELPS
Sbjct: 464 EREVGSRFTELPS 476
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 110/154 (71%), Positives = 124/154 (80%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 35 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 94
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVV 119
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 95 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 154
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR 153
GTPGRVFDML R+ L P YIKMFVLDEADEMLSR
Sbjct: 155 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR 188
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 129/363 (35%), Positives = 199/363 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+GL E L+R I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL++L
Sbjct: 6 LGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFP 65
Query: 59 ----D----YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 109
D +G Q + LVL PTRELA Q+ + + L V AC+ GG + +
Sbjct: 66 NGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKF-VSACIFGGVGMNPQVQ 124
Query: 110 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAK 169
+ GV V+V PGR+ D+ + S+ ++++ VLDEAD ML GF + + LPAK
Sbjct: 125 AMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAK 184
Query: 170 VQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 229
Q +FSAT + + K ++ P RI V T+E I+Q + K L L
Sbjct: 185 RQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH-KRSLLAHL 243
Query: 230 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 289
A Q ++F T+ + L + + A HG+ QN R + +F++G R++
Sbjct: 244 ITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIM 303
Query: 290 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 349
+ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+E++L
Sbjct: 304 VATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKS 363
Query: 350 IQK 352
I++
Sbjct: 364 IER 366
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 454 (164.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 100/296 (33%), Positives = 157/296 (53%)
Query: 66 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 125
+AL+L PTRELA Q+ ++ YL +K GG + ++L+ G+ V+V TPGR+
Sbjct: 93 RALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQGLDVLVATPGRL 152
Query: 126 FDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALE 185
+ L +++ +K VLDEAD ML GF I + + K Q +FSAT
Sbjct: 153 LEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKS 212
Query: 186 ITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTR 245
+ + + P I V ++ T IKQ V EE K E L +L Q ++F T+
Sbjct: 213 LANQLLKSPKTISVSKENTTSGKIKQAVYWVT-EERKRELLSELIGVNNWQQVLVFAGTK 271
Query: 246 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 305
+ L +++ + HGD Q R+ + +F G RVL+ TD+ ARG+D+ ++
Sbjct: 272 ESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLA 331
Query: 306 LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 361
V+N+ LP PE+Y+HR+GR+GR G+ G AI+ V+ DER L +I++ E +
Sbjct: 332 FVVNFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDERFLENIEQLIERKFERI 387
Score = 109 (43.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
+GL +LL+ + A G++ + IQQ I +G+D++ AQ+GTGKTA F IL +
Sbjct: 6 IGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAI 63
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 124/357 (34%), Positives = 191/357 (53%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+GL +L + G+ P+ IQ++ I +G D++ AQ+GTGKT F + IL +L
Sbjct: 12 LGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSR 71
Query: 61 GLVQC-----QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 115
+ LVLAPTRELA QI G L ++V GG + R L+ G
Sbjct: 72 NASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGA 131
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVF 175
H++V TPGR+ D++ ++++ D ++ +LDEAD+ML GF + I + +P+K Q F
Sbjct: 132 HILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKRQTLFF 191
Query: 176 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 235
SATMP + F+ P + V T I+Q VE+ E K L + +
Sbjct: 192 SATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE-KASLLIEKIRDPEL 250
Query: 236 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 295
+++F T+ D + ++ D A HG+ Q+ R+ + F++G +L+ TD+
Sbjct: 251 RSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIA 310
Query: 296 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 352
ARGI V ++ VINYDLP PE ++HRIGR+ R G GVAI+F +RD+ L I+K
Sbjct: 311 ARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEK 367
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 129/363 (35%), Positives = 199/363 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 58
+GL E L+ I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL++L
Sbjct: 6 LGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFP 65
Query: 59 ----D----YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 109
D +G Q + LVL PTRELA Q+ + L V AC+ GG + +
Sbjct: 66 NGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKF-VSACIFGGVGMNPQVQ 124
Query: 110 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAK 169
+ GV V+V PGR+ D+ + S+ ++++ VLDEAD ML GF + + LPAK
Sbjct: 125 AMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAK 184
Query: 170 VQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 229
Q +FSAT + ++ K ++ P RI V T+E I+Q + K L L
Sbjct: 185 RQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH-KRALLAHL 243
Query: 230 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 289
A Q ++F T+ + L + + + A HG+ QN R + +F++G R+L
Sbjct: 244 ITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRIL 303
Query: 290 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 349
+ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+E++L
Sbjct: 304 VATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKS 363
Query: 350 IQK 352
I++
Sbjct: 364 IER 366
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 121/340 (35%), Positives = 191/340 (56%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 62
L +L + + G+ + + IQ + + KG+D+I QA++G+GKTA F G+L ++
Sbjct: 13 LSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPINPRY 72
Query: 63 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGT 121
CQALV+ PTRELA Q+ K +R L +KV GG S L+ G H++VGT
Sbjct: 73 FGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAHIIVGT 132
Query: 122 PGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 181
PGR+ LR+ SL D + VLDEAD ML GF D I DI + P++ Q +FSAT P
Sbjct: 133 PGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFSATYPV 192
Query: 182 EALEITRKFMNKPVRILVK--RDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
++ KFM P + + D+ +E ++FY + EE ++ + + V
Sbjct: 193 GIKQLASKFMRDPQTVKAEAFHDDTQIE--QRFY-EISPEE-RMSAVTKVLHHFRPASCV 248
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
F T+++V D + ++ + HGD++Q RD ++ F + S+ VL+ TD+ ARG+
Sbjct: 249 AFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGL 308
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 339
D+ + +VIN +L E ++HR+GR+GR G KG+A++ V
Sbjct: 309 DIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLV 348
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 432 (157.1 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 106/294 (36%), Positives = 155/294 (52%)
Query: 66 QALVLAPTRELAQQIEKVMRALGDYL--G------------VKVHACVGGTSVREDQRIL 111
+ALV+ PTREL Q+ + G YL G + V + GG L
Sbjct: 86 RALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRPYEPQIEAL 145
Query: 112 QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQ 171
+AG VVVGTPGR+ D+ ++ L+ + + VLDEADEML GF I I + +PA Q
Sbjct: 146 RAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQ 205
Query: 172 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTL--EGIKQFYVNVEKEEWKLETLCDL 229
+FSATMP + + R FM +P I + + + +QF + K+E + +
Sbjct: 206 SMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHALD-KVELVSRV 264
Query: 230 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 289
+ ++IF T+R + D++ R V A HGD+ Q R+ ++ FR+G VL
Sbjct: 265 LQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVL 324
Query: 290 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 343
+ TD+ ARGID+ V+ VINY P + Y+HRIGR+GR GR GVA+ V D+
Sbjct: 325 VATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDE 378
Score = 128 (50.1 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+G+++ ++R + G ++P AIQ+ + G DVI QA++G GKT F +LQ++
Sbjct: 15 LGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQRITS 74
Query: 61 G-----LVQC-QALVLAPTRELAQQIEKVMRALGDYL 91
G L +ALV+ PTREL Q+ + G YL
Sbjct: 75 GDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYL 111
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/366 (33%), Positives = 204/366 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L+++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L +L+
Sbjct: 15 LSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLNKLEV 74
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
+ Q++V+ PTRELA Q+ K +R L + +K+ GGT L+ G HV+V
Sbjct: 75 KKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAHVIV 134
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGR+ + + + +L+ D + + VLDEAD ML GF+ + +I P Q +FSAT
Sbjct: 135 GTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFSATF 194
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + I+ M PV + + E I Q + V ++ +L+ L L + +
Sbjct: 195 PDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQVESTA 253
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+ ARG+
Sbjct: 254 IFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGL 313
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI- 358
D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ + VI
Sbjct: 314 DIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEAVIT 373
Query: 359 -EELPS 363
E LPS
Sbjct: 374 PEPLPS 379
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/363 (33%), Positives = 202/363 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 59
+GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L + D
Sbjct: 6 LGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFAD 65
Query: 60 YGLVQ---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
++ ++++L PTRELA Q+E+ + YL + A GG ++ L GV
Sbjct: 66 APKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q +FS
Sbjct: 126 LLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT+ + + + + + I + R I Q+ V+K+ K L L +
Sbjct: 186 ATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKENNWA 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF+ T+ L ++ R A H Q R+ ++ +F++G L+ T +++
Sbjct: 245 QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVS 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I++
Sbjct: 305 RGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGH 364
Query: 357 VIE 359
+IE
Sbjct: 365 IIE 367
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/366 (33%), Positives = 204/366 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 60
+ L+++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L +L+
Sbjct: 15 LSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLNKLEV 74
Query: 61 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119
+ Q++V+ PTRELA Q+ K +R L + +K+ GGT L+ G HV+V
Sbjct: 75 KKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAHVIV 134
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 179
GTPGR+ + + + +L+ D + + VLDEAD ML GF+ + +I P Q +FSAT
Sbjct: 135 GTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFSATF 194
Query: 180 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 239
P + I+ M PV + + E I Q + V ++ +L+ L L + +
Sbjct: 195 PDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQVESTA 253
Query: 240 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 299
IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+ ARG+
Sbjct: 254 IFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGL 313
Query: 300 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI- 358
D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ + VI
Sbjct: 314 DIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEAVIT 373
Query: 359 -EELPS 363
E LPS
Sbjct: 374 PEPLPS 379
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/363 (33%), Positives = 202/363 (55%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 59
+GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L + D
Sbjct: 6 LGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFAD 65
Query: 60 YGLVQ---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
++ ++++L PTRELA Q+E+ + YL + A GG ++ L GV
Sbjct: 66 APKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVD 125
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 176
++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q +FS
Sbjct: 126 LLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFS 185
Query: 177 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 236
AT+ + + + + + I + R I Q+ V+K+ K L L +
Sbjct: 186 ATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKENNWA 244
Query: 237 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
Q++IF+ T+ L ++ R A H Q R+ ++ +F++G L+ T +++
Sbjct: 245 QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVS 304
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I++
Sbjct: 305 RGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGH 364
Query: 357 VIE 359
+IE
Sbjct: 365 IIE 367
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 120/338 (35%), Positives = 186/338 (55%)
Query: 8 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQA 67
L + G+ + +Q + G DV QA++G+GKTA F G+LQQ+D L Q QA
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74
Query: 68 LVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 126
LVL PTRELA Q+ +R L +L K+ GG + LQ H++V TPGR+
Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLL 134
Query: 127 DMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEI 186
D L++ ++ D + V+DEAD ML GF D I D+ + PA Q +FSAT P I
Sbjct: 135 DHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAI 194
Query: 187 TRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL-ETLCDLYETLAITQSVIFVNTR 245
+ + P+ I + + +QFY K + L + L L++ + V+F NT+
Sbjct: 195 SGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQP---SSCVVFCNTK 251
Query: 246 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 305
+ + D + + + HGD++Q RD + F +GS+RVL+ TD+ ARG+D++ +
Sbjct: 252 KDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLE 311
Query: 306 LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 343
LV+N++L PE ++HRIGR+ R G G+AI+F ++
Sbjct: 312 LVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 119/361 (32%), Positives = 195/361 (54%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ----- 57
L E+++ + G+++P+ IQ+ I G D++ AQ+GTGKTA F I+ +
Sbjct: 9 LLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNK 68
Query: 58 LDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 117
+D ++L+L PTRELA QI + + D LG+K GG + ++ G+ +
Sbjct: 69 IDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDI 128
Query: 118 VVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSA 177
+V TPGR+ D++ + +++FVLDEAD ML GF + I LP Q +FSA
Sbjct: 129 LVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSA 188
Query: 178 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
TMP E + + P +I + + +T++ + Q +++K K+ L ++ +
Sbjct: 189 TMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN-KVPLLFNILTKADYEK 247
Query: 238 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 297
+IF T+ D + + T ++ H Q R+ ++ F+ + RVL+ TD+ AR
Sbjct: 248 VLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAAR 307
Query: 298 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 357
GIDV ++LVINY+LP P NY+HRIGR+ R G+ G+AI+F +D R L +I+ V
Sbjct: 308 GIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIENSIGQV 367
Query: 358 I 358
I
Sbjct: 368 I 368
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 135/373 (36%), Positives = 198/373 (53%)
Query: 5 ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG--L 62
+N+L I GF +P+ IQ +G KG D+I A++G+GKT + L + L
Sbjct: 174 DNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRL 233
Query: 63 VQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVV 119
Q L+LAPTRELA QI++ R G GV+ GG R L+ GV +V+
Sbjct: 234 GQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVI 293
Query: 120 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPAKVQVGVFSAT 178
TPGR+ DML Q + VLDEAD ML GF+ QI I Q+ P + Q ++SAT
Sbjct: 294 ATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR-QTLLWSAT 352
Query: 179 MPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCDLYETLAITQ 237
P E + R+F+ P + ++ +L + I Q V E K L L + L
Sbjct: 353 WPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE-KYNRLLTLLKQLMDGS 411
Query: 238 SV-IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 296
+ IFV T+R D +T ++R A HGD Q+ RD ++ EF+SG S ++ TD+ A
Sbjct: 412 KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAA 471
Query: 297 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 356
RG+DV+ + V+NYD P E+Y+HRIGR+GR G KG+A F T D+ + ++ K
Sbjct: 472 RGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQE 531
Query: 357 VIEELPSNVADLL 369
+ +P ++ L+
Sbjct: 532 AGQVVPPTLSALV 544
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 124/362 (34%), Positives = 197/362 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ---- 56
+GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F ++Q
Sbjct: 11 LGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQRFIE 70
Query: 57 ---QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA 113
Q + + +ALVL PTRELAQQ+ ++A +K+ A GGTS++ L+
Sbjct: 71 QPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRG 130
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
GV +++ TPGR+ D +SL +++ VLDEAD ML GF + + + L Q
Sbjct: 131 GVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTL 190
Query: 174 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
FSAT + + + M P+ + V T E ++Q V+K+ K E L L +
Sbjct: 191 FFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KRELLSYLIGSK 249
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 293
Q ++F TR+ D L ++++ + +GD Q R + +F++G R LI TD
Sbjct: 250 NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATD 309
Query: 294 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 353
+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D++ L I++
Sbjct: 310 VAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERL 369
Query: 354 YN 355
N
Sbjct: 370 LN 371
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 124/362 (34%), Positives = 197/362 (54%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ---- 56
+GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F ++Q
Sbjct: 11 LGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQRFIE 70
Query: 57 ---QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA 113
Q + + +ALVL PTRELAQQ+ ++A +K+ A GGTS++ L+
Sbjct: 71 QPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRG 130
Query: 114 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
GV +++ TPGR+ D +SL +++ VLDEAD ML GF + + + L Q
Sbjct: 131 GVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTL 190
Query: 174 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
FSAT + + + M P+ + V T E ++Q V+K+ K E L L +
Sbjct: 191 FFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KRELLSYLIGSK 249
Query: 234 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 293
Q ++F TR+ D L ++++ + +GD Q R + +F++G R LI TD
Sbjct: 250 NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATD 309
Query: 294 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 353
+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D++ L I++
Sbjct: 310 VAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERL 369
Query: 354 YN 355
N
Sbjct: 370 LN 371
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 130/359 (36%), Positives = 189/359 (52%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 61
G + GI A G+E P+ IQ + I G DV+ AQ+GTGKTA F IL +L G
Sbjct: 7 GFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRLQQG 66
Query: 62 -LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVG 120
+ +ALV+APTRELA+QI LG ++ GG V + L+AG VVV
Sbjct: 67 ERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVA 126
Query: 121 TPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 180
PGR+ D + + ++ +++ VLDEAD+M GF I + + LP + Q +FSATMP
Sbjct: 127 CPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMP 186
Query: 181 PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVI 240
+ + + + PV + V + Y VE + K L +L +I
Sbjct: 187 IDIRTLAQDILVDPVTVQVGTVAPAVTVAHALYP-VE-QHLKTPLLLELLRHTDTESVLI 244
Query: 241 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 300
F T+ + L +++ + ++ G++ QN R + FR G+ ++L+ TD+ ARGID
Sbjct: 245 FTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGID 304
Query: 301 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIE 359
V QVS VINYD+P E Y+HRIGR+GR R G A VT DD M+ I++ IE
Sbjct: 305 VSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLGAPIE 363
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 136/373 (36%), Positives = 203/373 (54%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGILQ---- 56
G + +L+ + GF KP+ IQ +G G D+I A +G+GKT ++C I+
Sbjct: 133 GFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQ 192
Query: 57 -QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ-RILQAG 114
QL YG LVLAPTRELA QI+ G ++ + CV G + + Q R L G
Sbjct: 193 PQLQYGDGPI-VLVLAPTRELAVQIQTECSKFGKSSRIR-NTCVYGGAPKGPQIRDLARG 250
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPAKVQVG 173
V + + TPGR+ DML + VLDEAD ML GF+ QI I Q+ P + Q
Sbjct: 251 VEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTL 309
Query: 174 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETL 233
++SAT P E ++TR ++N P+++ + EL V V E K + L E+
Sbjct: 310 MWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLES- 368
Query: 234 AITQS----VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 289
A+ + ++F +T+R D +T +RS A HGD +QN RD ++ EFR G + ++
Sbjct: 369 ALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIM 428
Query: 290 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 349
+ TD+ ARGIDV+ ++ VINYD+P E+Y+HRIGR+GR G G AI+F T + ++ D
Sbjct: 429 VATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGD 488
Query: 350 IQKFYNVVIEELP 362
+ K + +P
Sbjct: 489 LCKIMREANQTVP 501
>UNIPROTKB|K9J6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00660000095549 EMBL:AAEX03008212
Ensembl:ENSCAFT00000000797 Uniprot:K9J6N8
Length = 310
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 115/298 (38%), Positives = 178/298 (59%)
Query: 73 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLR 130
TRELA QI K Y+ VKV GG S+++D+ +L+ H+VVGTPGR+ + R
Sbjct: 4 TRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALAR 63
Query: 131 RQSLRPDYIKMFVLDEADEMLSR-GFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRK 189
+SL +IK F+LDE D+ML + + + +IF++ P + QV +FSAT+ E + RK
Sbjct: 64 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 123
Query: 190 FMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKV 248
FM P+ I V + +LTL G++Q+YV ++ E K L DL + L Q VIFV + ++
Sbjct: 124 FMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRC 182
Query: 249 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 308
L + ++ A H M Q R ++F+ R+L+ T+L RG+D+++V++
Sbjct: 183 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 242
Query: 309 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPSNV 365
NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 243 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 300
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 128/371 (34%), Positives = 211/371 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQL- 58
+GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+QL
Sbjct: 6 LGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLEQLA 64
Query: 59 ----DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
D L++ ALV+ PTRELA Q+ ++ +L +K A GG ++ ++ ++ G
Sbjct: 65 AKPADKPLLR--ALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 122
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
V ++V TPGR+FD++ + +L + V+DEAD ML GF I + +L+ Q +
Sbjct: 123 VDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTML 182
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT +++ K +N+P + V + T ++Q V+K K E L +L
Sbjct: 183 FSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRNN 240
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q ++F +T+ + L ++ + HGD Q R+ ++ +F++G RVL+ TD+
Sbjct: 241 WRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDV 300
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 354
ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ D+ ML +I+
Sbjct: 301 AARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA-- 358
Query: 355 NVVIEELPSNV 365
++ E+LP V
Sbjct: 359 -LIGEKLPVTV 368
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 128/371 (34%), Positives = 211/371 (56%)
Query: 1 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQL- 58
+GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+QL
Sbjct: 6 LGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLEQLA 64
Query: 59 ----DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 114
D L++ ALV+ PTRELA Q+ ++ +L +K A GG ++ ++ ++ G
Sbjct: 65 AKPADKPLLR--ALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 122
Query: 115 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGV 174
V ++V TPGR+FD++ + +L + V+DEAD ML GF I + +L+ Q +
Sbjct: 123 VDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTML 182
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 234
FSAT +++ K +N+P + V + T ++Q V+K K E L +L
Sbjct: 183 FSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRNN 240
Query: 235 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 294
Q ++F +T+ + L ++ + HGD Q R+ ++ +F++G RVL+ TD+
Sbjct: 241 WRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDV 300
Query: 295 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 354
ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ D+ ML +I+
Sbjct: 301 AARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA-- 358
Query: 355 NVVIEELPSNV 365
++ E+LP V
Sbjct: 359 -LIGEKLPVTV 368
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 145/382 (37%), Positives = 209/382 (54%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL------Q 56
L + +++ I G++ P+AIQ +G G + + A++G+GKT + + Q
Sbjct: 288 LPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQ 347
Query: 57 QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGV 115
L G ALVLAPTRELAQQI++V G V+ + CV GG R LQ G
Sbjct: 348 PLQRGDGPI-ALVLAPTRELAQQIQQVATEFGSSSYVR-NTCVFGGAPKGGQMRDLQRGC 405
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPAKVQVGV 174
+V+ TPGR+ D L S VLDEAD ML GF+ QI I Q+ P + Q +
Sbjct: 406 EIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR-QTLM 464
Query: 175 FSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFYVNV----EKEEWKLETLC-D 228
+SAT P E ++ F+ ++I + EL+ I+Q V+V KEE KL+TL D
Sbjct: 465 WSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQV-VDVCDEFSKEE-KLKTLLSD 522
Query: 229 LYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 287
+Y+T + +IFV T+R+VD L +RS A HGD Q+ RD ++REFRSG S
Sbjct: 523 IYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSN 582
Query: 288 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM- 346
+L+ TD+ ARG+DV + VIN+D P E+Y+HRIGR+GR KG + F T+++ +
Sbjct: 583 ILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQA 642
Query: 347 --LFDIQKFYNVVIEELPSNVA 366
L D+ + N I N+A
Sbjct: 643 KALVDVLREANQEINPALENLA 664
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/381 (33%), Positives = 207/381 (54%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 61
G + +L + A GFEKP+AIQ +G G DV+ A++G+GKT ++C + ++
Sbjct: 146 GFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQ 205
Query: 62 LVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGV 115
+ L+LAPTRELA QI+ + G ++ + CV GG R L GV
Sbjct: 206 PLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYGGVPKGPQIRDLSRGV 264
Query: 116 HVVVGTPGRVFDMLR--RQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPAKVQV 172
V + TPGR+ DML R +LR + VLDEAD ML GF+ QI I Q+ P + Q
Sbjct: 265 EVCIATPGRLIDMLEAGRTNLRR--VTYLVLDEADRMLDMGFEPQIRKIISQIRPDR-QT 321
Query: 173 GVFSATMPPEALEITRKFMNKPVRILVKRDELT----LEGIKQFYVNVEKEEWKLETLCD 228
++SAT P E ++ F+N +++ + +L+ + I + EK + ++ L
Sbjct: 322 CMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK 381
Query: 229 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 288
+ E + ++F T+R D +T +R + HGD Q RD ++ EF++G S +
Sbjct: 382 IMENRG-NKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPI 440
Query: 289 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 348
++ TD+ +RGIDV+ ++ VINYD P E+Y+HRIGR+GR G KG AI F T D+ +
Sbjct: 441 MVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQAR 500
Query: 349 DIQKFYNVVIEELPSNVADLL 369
D+ + +++ +A+++
Sbjct: 501 DLVTILSEAKQQIDPRLAEMV 521
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 536 (193.7 bits), Expect = 1.0e-50, P = 1.0e-50
Identities = 129/380 (33%), Positives = 204/380 (53%)
Query: 2 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DY 60
GL + I + G+EKP++IQ + I G DVI A++G+GKT F + + + D
Sbjct: 424 GLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQ 483
Query: 61 GLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 116
++ A+++ PTRELA QI + + L ++ GG +++ L+ G
Sbjct: 484 RPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAE 543
Query: 117 VVVGTPGRVFDMLRRQSLRPDYIKM---FVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 173
+VV TPGR+ D+L + R + VLDEAD M GF+ Q+ I + Q
Sbjct: 544 IVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603
Query: 174 VFSATMPPEALE-ITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWK----LETLCD 228
+FSAT P A+E + RK + KPV I V + ++Q V V EE K LE L +
Sbjct: 604 LFSATFP-RAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELLGE 661
Query: 229 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 288
LY ++++FV+ + D L + R +T ++ HG DQ+ RD + ++++G V
Sbjct: 662 LYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDV 721
Query: 289 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 348
LI T ++ARG+DV+ + LV+NYD P E+Y+HR+GR+GR G GVA+ F+T + E+
Sbjct: 722 LIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAV 781
Query: 349 DIQKFYNVVIEELPSNVADL 368
DI K + + +P + L
Sbjct: 782 DIAKALKMSKQPVPKELQTL 801
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 534 (193.0 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 131/359 (36%), Positives = 199/359 (55%)
Query: 3 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG- 61
L +++ + GF KP+AIQ +G G D++ AQ+G+GKT + + +
Sbjct: 244 LPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP 303
Query: 62 -LVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKV-HACV-GGTSVREDQRILQAGV 115
+++ + ALVLAPTRELAQQI+ V+R G ++ H C+ GG+S R L GV
Sbjct: 304 PIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGV 363
Query: 116 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVF 175
V++ TPGR+ D L ++ VLDEAD ML GF+ QI I + + QV ++
Sbjct: 364 EVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMW 423
Query: 176 SATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFYVNVEKEEWKLETL-CDLYETL 233
SAT P E + F+N ++I + L+ I+Q V + E K + L C L E
Sbjct: 424 SATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQI-VEICTEIEKPQRLVCLLNEIS 482
Query: 234 AITQS-------VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 286
I S ++FV T+ KV+ + +R+ + ++ HGD QN RD ++++FR+G S
Sbjct: 483 PIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKS 542
Query: 287 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 345
+LI TD+ +RG+DV+ + VINYD P ENY+HRIGR+GR + G A F T D+ +
Sbjct: 543 NILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAK 601
WARNING: HSPs involving 705 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 369 369 0.00085 117 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 955
No. of states in DFA: 609 (65 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.07u 0.18s 33.25t Elapsed: 00:00:01
Total cpu time: 33.11u 0.18s 33.29t Elapsed: 00:00:01
Start: Mon May 20 18:05:18 2013 End: Mon May 20 18:05:19 2013
WARNINGS ISSUED: 2