BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017575
MGRALFAVTNVATEVNSVEQAQKRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGV
MIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITF
SKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLV
DVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDA
ELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCA
ELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLI
IEKFYEVFS

High Scoring Gene Products

Symbol, full name Information P value
CHLI2
magnesium chelatase i2
protein from Arabidopsis thaliana 1.1e-149
CHLI1 protein from Arabidopsis thaliana 9.3e-146
bchI
Magnesium chelatase, subunit BchI
protein from Pseudomonas protegens Pf-5 2.9e-54
ALB1
ALBINA 1
protein from Arabidopsis thaliana 1.9e-41

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017575
        (369 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2152405 - symbol:CHLI2 "magnesium chelatase i2...  1461  1.1e-149  1
TAIR|locus:2005500 - symbol:CHLI1 species:3702 "Arabidops...  1424  9.3e-146  1
UNIPROTKB|Q4KAH8 - symbol:bchI "Magnesium chelatase, subu...   425  2.9e-54   2
TAIR|locus:2201796 - symbol:ALB1 "ALBINA 1" species:3702 ...   446  1.9e-41   1


>TAIR|locus:2152405 [details] [associations]
            symbol:CHLI2 "magnesium chelatase i2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006779
            "porphyrin-containing compound biosynthetic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;ISS;IDA] [GO:0015979
            "photosynthesis" evidence=IEA] [GO:0015995 "chlorophyll
            biosynthetic process" evidence=IEA;ISS;IMP;TAS] [GO:0016851
            "magnesium chelatase activity" evidence=IEA;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0010007 "magnesium chelatase
            complex" evidence=NAS;TAS] [GO:0016887 "ATPase activity"
            evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
            evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
            process, mevalonate-independent pathway" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA]
            InterPro:IPR000523 InterPro:IPR003593 InterPro:IPR011775
            Pfam:PF01078 SMART:SM00382 UniPathway:UPA00668 GO:GO:0005524
            EMBL:CP002688 GO:GO:0009570 GO:GO:0016887 GO:GO:0015979
            EMBL:AB016870 GO:GO:0015995 GO:GO:0010007 GO:GO:0016851 KO:K03405
            ProtClustDB:CLSN2685429 TIGRFAMs:TIGR02030 EMBL:AY140022
            EMBL:BT015783 IPI:IPI00520566 RefSeq:NP_199405.2 UniGene:At.29985
            UniGene:At.70220 ProteinModelPortal:Q5XF33 SMR:Q5XF33 STRING:Q5XF33
            PRIDE:Q5XF33 EnsemblPlants:AT5G45930.1 GeneID:834633
            KEGG:ath:AT5G45930 TAIR:At5g45930 InParanoid:Q5XF33 OMA:FGLCVNI
            PhylomeDB:Q5XF33 Genevestigator:Q5XF33 Uniprot:Q5XF33
        Length = 418

 Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
 Identities = 291/364 (79%), Positives = 313/364 (85%)

Query:     7 AVTNVATEVNSVEQAQK-RSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGD 65
             +V NVATE+NSVEQA+K  SKES RPVYPF AIVGQ+EMKLCLLLNVIDPKIGGVMIMGD
Sbjct:    55 SVMNVATEINSVEQAKKIDSKESARPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGD 114

Query:    66 RGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINM 125
             RGTGKSTTVRSLVDLLP I VV GDPYNSDP DPE MG EVRE V KGEELS+  +KINM
Sbjct:   115 RGTGKSTTVRSLVDLLPEITVVSGDPYNSDPRDPECMGKEVREKVQKGEELSVIETKINM 174

Query:   126 VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYXXXXXXXXXXXXXXXXX 185
             VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILY                 
Sbjct:   175 VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLD 234

Query:   186 SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK 245
             SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK
Sbjct:   235 SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK 294

Query:   246 IVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVD 305
             IVEERARFD NPKEFR++Y+ EQ KLQ+QI +ARS+L AVQID DLKVKISKVCAEL+VD
Sbjct:   295 IVEERARFDSNPKEFRETYQEEQLKLQEQITTARSNLSAVQIDQDLKVKISKVCAELDVD 354

Query:   306 GLRGDIVSNRXXXXXXXXXGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFY 365
             GLRGD+V NR         GRD+V+AED+  V+PNCLRHRLRKDPLES+DSG+L+ EKFY
Sbjct:   355 GLRGDMVINRAARALAALQGRDQVTAEDVGIVIPNCLRHRLRKDPLESMDSGILVTEKFY 414

Query:   366 EVFS 369
             EVF+
Sbjct:   415 EVFT 418


>TAIR|locus:2005500 [details] [associations]
            symbol:CHLI1 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006779 "porphyrin-containing compound
            biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
            [GO:0015995 "chlorophyll biosynthetic process"
            evidence=IEA;RCA;TAS] [GO:0016851 "magnesium chelatase activity"
            evidence=IEA;ISS;NAS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0010007 "magnesium chelatase complex"
            evidence=TAS] [GO:0005618 "cell wall" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0006364 "rRNA processing"
            evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
            process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
            biosynthetic process" evidence=RCA] [GO:0010103 "stomatal complex
            morphogenesis" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
            biosynthetic process, mevalonate-independent pathway" evidence=RCA]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            InterPro:IPR000523 InterPro:IPR003593 InterPro:IPR011775
            Pfam:PF01078 SMART:SM00382 UniPathway:UPA00668 GO:GO:0005524
            GO:GO:0005618 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0016887 EMBL:AL161548 GO:GO:0015979 GO:GO:0015995
            eggNOG:COG1239 GO:GO:0010007 GO:GO:0016851 EMBL:X51799 EMBL:X91411
            EMBL:AL021710 EMBL:AY093192 EMBL:BT010129 EMBL:AK227146
            IPI:IPI00530817 PIR:S12785 RefSeq:NP_193583.1 UniGene:At.27665
            ProteinModelPortal:P16127 SMR:P16127 STRING:P16127
            SWISS-2DPAGE:P16127 PaxDb:P16127 PRIDE:P16127 ProMEX:P16127
            EnsemblPlants:AT4G18480.1 GeneID:827580 KEGG:ath:AT4G18480
            TAIR:At4g18480 HOGENOM:HOG000225091 InParanoid:P16127 KO:K03405
            OMA:PRGMAKS PhylomeDB:P16127 ProtClustDB:CLSN2685429
            BioCyc:MetaCyc:MONOMER1F-75 Genevestigator:P16127
            GermOnline:AT4G18480 TIGRFAMs:TIGR02030 Uniprot:P16127
        Length = 424

 Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
 Identities = 280/365 (76%), Positives = 311/365 (85%)

Query:     7 AVTNVATEVNSVEQAQKR--SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMG 64
             +V NVATE+NS EQ   +  SK+S RPVYPF AIVGQ+EMKLCLLLNVIDPKIGGVMIMG
Sbjct:    60 SVMNVATEINSTEQVVGKFDSKKSARPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMG 119

Query:    65 DRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKIN 124
             DRGTGKSTTVRSLVDLLP I VV GDPYNSDP DPE MG+EVRE V KGE++ +  +KIN
Sbjct:   120 DRGTGKSTTVRSLVDLLPEINVVAGDPYNSDPIDPEFMGVEVRERVEKGEQVPVIATKIN 179

Query:   125 MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYXXXXXXXXXXXXXXXX 184
             MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILY                
Sbjct:   180 MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLL 239

Query:   185 XSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRV 244
              SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDA+LRV
Sbjct:   240 DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDADLRV 299

Query:   245 KIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNV 304
             KIVEERARFD NPK+FRD+YK EQ KLQ QI++AR++L +VQID +LKVKIS+VC+ELNV
Sbjct:   300 KIVEERARFDSNPKDFRDTYKTEQDKLQDQISTARANLSSVQIDRELKVKISRVCSELNV 359

Query:   305 DGLRGDIVSNRXXXXXXXXXGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKF 364
             DGLRGDIV+NR         G+D+V+ +D+ATV+PNCLRHRLRKDPLESIDSG+L+ EKF
Sbjct:   360 DGLRGDIVTNRAAKALAALKGKDRVTPDDVATVIPNCLRHRLRKDPLESIDSGVLVSEKF 419

Query:   365 YEVFS 369
              E+FS
Sbjct:   420 AEIFS 424


>UNIPROTKB|Q4KAH8 [details] [associations]
            symbol:bchI "Magnesium chelatase, subunit BchI"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0005524 "ATP
            binding" evidence=ISS] [GO:0016851 "magnesium chelatase activity"
            evidence=ISS] [GO:0030494 "bacteriochlorophyll biosynthetic
            process" evidence=ISS] InterPro:IPR003593 InterPro:IPR011704
            Pfam:PF07728 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
            GO:GO:0016887 EMBL:CP000076 eggNOG:COG1239 GO:GO:0016851
            GO:GO:0030494 HOGENOM:HOG000225091 KO:K03405 RefSeq:YP_260755.2
            GeneID:3475569 KEGG:pfl:PFL_3653 PATRIC:19876675
            ProtClustDB:CLSK867643 BioCyc:PFLU220664:GIX8-3668-MONOMER
            Uniprot:Q4KAH8
        Length = 335

 Score = 425 (154.7 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 98/261 (37%), Positives = 142/261 (54%)

Query:    97 EDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEP 156
             E P  M    + ++ +G  L+   +    V LPLGATE+R+ GT+D++ AL +G   F P
Sbjct:    37 EGPRGMA---KSTLARG--LADLLASGQFVTLPLGATEERLVGTLDLDAALGQGRAQFSP 91

Query:   157 GLLAKANRGILYXXXXXXXXXXXXXXXXXSAASGWNTVEREGISISHPARFILIGSGNPE 216
             G+LAKA+ G+LY                  AASG N +ER+GIS  H A+F+LIG+ NPE
Sbjct:    92 GVLAKADGGVLYVDEVNLLPDHLVDLLLDVAASGTNLIERDGISHRHSAKFVLIGTMNPE 151

Query:   217 EGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIA 276
             EGELRPQLLDRFG++  +      + R +I+  R  FD +P+ F   +   Q  L+++  
Sbjct:   152 EGELRPQLLDRFGLNVALSGQPAPQERGQIIRRRLDFDSDPQGFCAQWAEPQTALRERCQ 211

Query:   277 SARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRXXXXXXXXXGRDKVSAEDIAT 336
              AR++L ++ +D      I++ C    VDGLR D+V  R         G   ++ EDI  
Sbjct:   212 QARAALASIPLDDQALALITERCFAAAVDGLRADLVWLRAARAHAAWRGAPAIAEEDIDA 271

Query:   337 VMPNCLRHRLRKDPLESIDSG 357
             V    LRHR R+ P  +  SG
Sbjct:   272 VAEFALRHRRRETPPSAPQSG 292

 Score = 153 (58.9 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 31/54 (57%), Positives = 36/54 (66%)

Query:    28 SQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLL 81
             S  P +P +A+VG E +KL L L  IDPKIGGV+I G RG  KST  R L DLL
Sbjct:     2 SDTPHFPLSAVVGAEALKLALCLTAIDPKIGGVLIEGPRGMAKSTLARGLADLL 55


>TAIR|locus:2201796 [details] [associations]
            symbol:ALB1 "ALBINA 1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
            [GO:0015995 "chlorophyll biosynthetic process" evidence=IEA;TAS]
            [GO:0016851 "magnesium chelatase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0010007 "magnesium chelatase complex" evidence=TAS] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
            stroma" evidence=IDA] [GO:0009690 "cytokinin metabolic process"
            evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
            process, mevalonate-independent pathway" evidence=RCA]
            InterPro:IPR000523 InterPro:IPR002035 InterPro:IPR003593
            InterPro:IPR011776 Pfam:PF01078 PROSITE:PS50234 SMART:SM00327
            SMART:SM00382 UniPathway:UPA00668 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0017111
            GO:GO:0009534 EMBL:AC006932 GO:GO:0015979 GO:GO:0015995
            EMBL:AY063821 EMBL:AY091402 EMBL:AK226535 EMBL:AF083555
            IPI:IPI00519030 PIR:B86218 RefSeq:NP_563821.2 UniGene:At.11572
            ProteinModelPortal:Q9SJE1 SMR:Q9SJE1 STRING:Q9SJE1 PaxDb:Q9SJE1
            PRIDE:Q9SJE1 EnsemblPlants:AT1G08520.1 GeneID:837374
            KEGG:ath:AT1G08520 TAIR:At1g08520 eggNOG:COG1239
            HOGENOM:HOG000225092 InParanoid:Q9SJE1 KO:K03404 OMA:FGLTVEV
            PhylomeDB:Q9SJE1 ProtClustDB:CLSN2918034
            BioCyc:ARA:AT1G08520-MONOMER BioCyc:MetaCyc:AT1G08520-MONOMER
            Genevestigator:Q9SJE1 GO:GO:0010007 GO:GO:0016851
            TIGRFAMs:TIGR02031 Uniprot:Q9SJE1
        Length = 760

 Score = 446 (162.1 bits), Expect = 1.9e-41, P = 1.9e-41
 Identities = 107/308 (34%), Positives = 157/308 (50%)

Query:    30 RPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVG 89
             R  +P  A+VGQE +K  LLL  +D +IGG+ I G RGT K+   R L ++LP I+VVVG
Sbjct:    80 RQFFPLAAVVGQEGIKTALLLGAVDREIGGIAISGRRGTAKTVMARGLHEILPPIEVVVG 139

Query:    90 DPYNSDPEDPEAMGIEVRESVVKGEELSITFS--KINMVDLPLGATEDRVCGTIDIEKAL 147
                N+DP  P+    ++ E +    + +I     K   + +PLG TEDR+ G++D+E+++
Sbjct:   140 SISNADPACPDEWEDDLDERIEYNADNTIKTEIVKSPFIQIPLGVTEDRLIGSVDVEESV 199

Query:   148 TEGVKAFEPGLLAKANRGILYXXXXXXXXXXXXXXXXXSAASGWNTVEREGISISHPARF 207
               G   F+PGLLA+A+RG+LY                     G N VEREGIS  HP + 
Sbjct:   200 KRGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTDGVNIVEREGISFRHPCKP 259

Query:   208 ILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAE 267
             +LI + NPEEG +R  LLDR  ++         E RV  V    +F +   E       E
Sbjct:   260 LLIATYNPEEGAVREHLLDRVAINLSADLPMSFEDRVAAVGIATQFQERCNEVFRMVNEE 319

Query:   268 QAKLQQQIASARSSLPAVQIDHD-LKVKISKVCAELNVDGLRGDIVSNRXXXXXXXXXGR 326
                 + QI  AR  L  V+I  + LK  + +      V G R ++ + R         GR
Sbjct:   320 TETAKTQIILAREYLKDVKISREQLKYLVLEAVRG-GVQGHRAELYAARVAKCLAAIEGR 378

Query:   327 DKVSAEDI 334
             +KV+ +D+
Sbjct:   379 EKVTIDDL 386


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      369       343   0.00096  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  188 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.58u 0.12s 27.70t   Elapsed:  00:00:02
  Total cpu time:  27.58u 0.12s 27.70t   Elapsed:  00:00:02
  Start:  Mon May 20 18:13:34 2013   End:  Mon May 20 18:13:36 2013

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