Query 017586
Match_columns 369
No_of_seqs 469 out of 3503
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 16:49:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 100.0 5.7E-33 1.9E-37 249.6 19.1 223 1-264 30-278 (280)
2 3ddj_A CBS domain-containing p 100.0 5.5E-33 1.9E-37 252.0 15.7 227 1-270 46-288 (296)
3 3t4n_C Nuclear protein SNF4; C 100.0 9.5E-31 3.3E-35 240.2 19.7 231 1-268 58-321 (323)
4 2yzq_A Putative uncharacterize 100.0 7.9E-31 2.7E-35 236.0 16.3 219 1-265 27-277 (282)
5 2qrd_G Protein C1556.08C; AMPK 100.0 9.3E-29 3.2E-33 228.0 21.8 232 1-269 50-317 (334)
6 2v8q_E 5'-AMP-activated protei 100.0 1.4E-28 4.7E-33 226.5 20.8 234 1-267 63-323 (330)
7 3ddj_A CBS domain-containing p 100.0 1.5E-28 5.1E-33 222.8 17.8 200 35-267 14-214 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 3.6E-27 1.2E-31 211.7 17.3 194 44-265 7-203 (280)
9 2yzq_A Putative uncharacterize 99.9 2.8E-26 9.5E-31 206.2 14.7 178 41-263 1-180 (282)
10 3t4n_C Nuclear protein SNF4; C 99.9 3.3E-25 1.1E-29 203.2 16.4 206 39-267 28-248 (323)
11 2v8q_E 5'-AMP-activated protei 99.9 8.4E-25 2.9E-29 201.1 15.6 202 40-265 34-249 (330)
12 2qrd_G Protein C1556.08C; AMPK 99.9 1.2E-23 4E-28 193.8 18.5 207 40-266 21-242 (334)
13 3k6e_A CBS domain protein; str 99.9 3.9E-22 1.3E-26 162.8 13.7 129 141-271 14-146 (156)
14 3hf7_A Uncharacterized CBS-dom 99.9 6.1E-22 2.1E-26 156.7 10.4 126 142-269 2-129 (130)
15 3lv9_A Putative transporter; C 99.9 3.4E-21 1.2E-25 156.0 14.2 126 139-269 20-147 (148)
16 3lhh_A CBS domain protein; str 99.9 2.3E-21 7.8E-26 161.1 13.1 130 139-273 39-170 (172)
17 3lfr_A Putative metal ION tran 99.9 4.9E-22 1.7E-26 158.6 8.5 129 142-273 3-133 (136)
18 3i8n_A Uncharacterized protein 99.9 1.9E-21 6.6E-26 153.8 10.4 125 139-267 3-129 (130)
19 3jtf_A Magnesium and cobalt ef 99.8 4.3E-21 1.5E-25 151.6 11.2 123 141-269 4-128 (129)
20 3oco_A Hemolysin-like protein 99.8 4.7E-21 1.6E-25 156.0 10.9 131 139-274 17-150 (153)
21 3ocm_A Putative membrane prote 99.8 1.2E-20 4.2E-25 156.7 12.8 131 138-274 32-164 (173)
22 3nqr_A Magnesium and cobalt ef 99.8 4.6E-21 1.6E-25 151.0 9.4 122 142-267 3-126 (127)
23 4esy_A CBS domain containing m 99.8 4.5E-21 1.6E-25 159.0 7.6 144 38-198 15-159 (170)
24 4esy_A CBS domain containing m 99.8 8.6E-21 2.9E-25 157.3 9.1 127 137-267 13-162 (170)
25 2ef7_A Hypothetical protein ST 99.8 2.4E-19 8.3E-24 142.1 15.6 125 141-269 3-127 (133)
26 3gby_A Uncharacterized protein 99.8 1.1E-19 3.7E-24 143.3 11.7 122 141-266 4-125 (128)
27 2rc3_A CBS domain; in SITU pro 99.8 1.2E-19 4.3E-24 144.2 12.0 124 143-267 7-131 (135)
28 3ctu_A CBS domain protein; str 99.8 1.5E-19 5.3E-24 147.5 12.7 132 138-271 11-146 (156)
29 3lqn_A CBS domain protein; csg 99.8 1.5E-19 5E-24 146.6 11.6 130 138-270 11-146 (150)
30 3fv6_A YQZB protein; CBS domai 99.8 9E-19 3.1E-23 143.4 15.9 133 134-270 9-147 (159)
31 2yzi_A Hypothetical protein PH 99.8 4.2E-19 1.4E-23 141.7 13.2 128 139-270 4-132 (138)
32 1pbj_A Hypothetical protein; s 99.8 3.7E-19 1.3E-23 139.4 12.5 121 143-267 2-122 (125)
33 3fhm_A Uncharacterized protein 99.8 9.1E-20 3.1E-24 150.3 9.3 131 138-269 20-152 (165)
34 3kpb_A Uncharacterized protein 99.8 3.2E-19 1.1E-23 139.2 11.9 117 143-266 2-119 (122)
35 3l2b_A Probable manganase-depe 99.8 5.4E-19 1.8E-23 155.4 14.6 218 40-264 6-241 (245)
36 2rih_A Conserved protein with 99.8 8E-19 2.8E-23 140.6 14.4 121 142-267 5-128 (141)
37 2p9m_A Hypothetical protein MJ 99.8 5.7E-19 1.9E-23 140.9 13.4 127 138-268 4-137 (138)
38 3oi8_A Uncharacterized protein 99.8 9.6E-20 3.3E-24 148.8 8.8 120 138-262 34-155 (156)
39 4fry_A Putative signal-transdu 99.8 2.3E-19 8E-24 146.5 11.0 129 142-271 7-139 (157)
40 3k2v_A Putative D-arabinose 5- 99.8 3.9E-19 1.3E-23 144.0 11.4 121 141-263 27-148 (149)
41 3lv9_A Putative transporter; C 99.8 2.1E-18 7.3E-23 139.4 15.1 136 20-200 4-144 (148)
42 4gqw_A CBS domain-containing p 99.8 4.2E-19 1.5E-23 143.9 10.3 127 142-269 5-145 (152)
43 2emq_A Hypothetical conserved 99.8 1.6E-18 5.4E-23 141.5 13.4 130 139-271 8-143 (157)
44 1y5h_A Hypothetical protein RV 99.8 2.7E-19 9.1E-24 141.9 8.1 121 142-265 8-129 (133)
45 3sl7_A CBS domain-containing p 99.8 1.3E-18 4.6E-23 145.2 11.8 129 142-270 4-159 (180)
46 3kxr_A Magnesium transporter, 99.8 5.4E-18 1.8E-22 144.5 15.7 122 139-269 51-176 (205)
47 2nyc_A Nuclear protein SNF4; b 99.8 2.4E-18 8.3E-23 138.1 12.7 124 141-267 7-141 (144)
48 2o16_A Acetoin utilization pro 99.8 2.4E-18 8.1E-23 141.0 12.8 126 141-269 4-137 (160)
49 1yav_A Hypothetical protein BS 99.8 2.1E-18 7.2E-23 141.2 11.9 129 139-270 11-145 (159)
50 1o50_A CBS domain-containing p 99.8 5.5E-18 1.9E-22 138.4 14.0 124 143-269 17-155 (157)
51 1pvm_A Conserved hypothetical 99.8 3.4E-18 1.2E-22 143.5 12.5 124 142-267 9-133 (184)
52 2uv4_A 5'-AMP-activated protei 99.8 9.1E-18 3.1E-22 136.3 13.6 121 142-266 23-150 (152)
53 3lhh_A CBS domain protein; str 99.8 1.2E-17 4E-22 138.6 14.5 141 16-201 19-164 (172)
54 1vr9_A CBS domain protein/ACT 99.8 4.8E-18 1.6E-22 146.0 12.0 161 40-251 12-175 (213)
55 3i8n_A Uncharacterized protein 99.7 8.5E-18 2.9E-22 132.7 11.3 122 37-200 2-128 (130)
56 2j9l_A Chloride channel protei 99.7 9.8E-18 3.3E-22 140.6 12.1 131 138-269 7-167 (185)
57 3fhm_A Uncharacterized protein 99.7 3.9E-17 1.3E-21 134.5 13.6 127 37-202 20-150 (165)
58 1pbj_A Hypothetical protein; s 99.7 6.2E-17 2.1E-21 126.6 13.6 119 41-198 1-119 (125)
59 3k6e_A CBS domain protein; str 99.7 2.9E-17 9.8E-22 133.9 11.9 123 40-199 14-140 (156)
60 3gby_A Uncharacterized protein 99.7 1.7E-17 5.7E-22 130.6 9.8 121 39-200 3-124 (128)
61 3nqr_A Magnesium and cobalt ef 99.7 6.8E-18 2.3E-22 132.7 7.5 117 40-198 2-123 (127)
62 3kpb_A Uncharacterized protein 99.7 5.4E-17 1.8E-21 126.4 12.5 116 41-200 1-118 (122)
63 2pfi_A Chloride channel protei 99.7 4.5E-17 1.6E-21 133.7 12.5 127 139-269 10-149 (164)
64 3jtf_A Magnesium and cobalt ef 99.7 2.9E-17 1E-21 129.4 10.6 118 39-200 3-125 (129)
65 2ef7_A Hypothetical protein ST 99.7 9.7E-17 3.3E-21 127.0 13.6 122 39-200 2-124 (133)
66 3ocm_A Putative membrane prote 99.7 1E-16 3.4E-21 133.0 13.9 138 18-201 15-157 (173)
67 3oco_A Hemolysin-like protein 99.7 5.6E-17 1.9E-21 131.8 11.7 121 37-200 16-142 (153)
68 4fry_A Putative signal-transdu 99.7 3.3E-17 1.1E-21 133.7 10.2 137 41-216 7-149 (157)
69 2o16_A Acetoin utilization pro 99.7 1.6E-16 5.5E-21 130.0 14.4 128 40-198 4-132 (160)
70 3hf7_A Uncharacterized CBS-dom 99.7 8.6E-17 3E-21 126.9 12.3 120 41-200 2-126 (130)
71 1vr9_A CBS domain protein/ACT 99.7 1.4E-16 4.8E-21 136.8 14.2 117 142-267 13-130 (213)
72 3fv6_A YQZB protein; CBS domai 99.7 2.1E-16 7.1E-21 129.3 14.4 125 38-200 14-143 (159)
73 2rc3_A CBS domain; in SITU pro 99.7 1.5E-16 5.2E-21 126.2 12.7 120 42-199 7-129 (135)
74 3lfr_A Putative metal ION tran 99.7 1.9E-17 6.5E-22 131.8 7.1 117 40-197 2-123 (136)
75 2yvy_A MGTE, Mg2+ transporter 99.7 1.3E-16 4.4E-21 142.7 13.3 122 139-269 132-259 (278)
76 1o50_A CBS domain-containing p 99.7 1.8E-16 6.1E-21 129.3 13.0 141 34-199 9-151 (157)
77 2oux_A Magnesium transporter; 99.7 1.4E-16 4.9E-21 142.9 12.9 121 140-269 135-261 (286)
78 3kxr_A Magnesium transporter, 99.7 1.8E-16 6.2E-21 135.0 12.9 121 34-199 47-172 (205)
79 3oi8_A Uncharacterized protein 99.7 1.3E-17 4.5E-22 136.0 5.4 119 35-196 32-155 (156)
80 2yzi_A Hypothetical protein PH 99.7 3.7E-16 1.3E-20 124.4 13.1 125 37-202 3-129 (138)
81 3k2v_A Putative D-arabinose 5- 99.7 3.6E-16 1.2E-20 126.4 12.9 117 41-196 28-147 (149)
82 2rih_A Conserved protein with 99.7 7.8E-16 2.7E-20 123.1 14.3 116 40-196 4-123 (141)
83 2pfi_A Chloride channel protei 99.7 4.9E-16 1.7E-20 127.5 12.5 131 37-200 9-146 (164)
84 3lqn_A CBS domain protein; csg 99.7 3.5E-16 1.2E-20 126.5 11.2 127 38-200 12-142 (150)
85 2p9m_A Hypothetical protein MJ 99.7 6.2E-16 2.1E-20 123.1 12.5 121 38-198 5-133 (138)
86 4gqw_A CBS domain-containing p 99.7 4E-16 1.4E-20 126.2 11.5 132 40-200 4-142 (152)
87 2d4z_A Chloride channel protei 99.7 2.8E-15 9.4E-20 131.0 17.1 161 37-201 9-245 (250)
88 2nyc_A Nuclear protein SNF4; b 99.7 8.5E-16 2.9E-20 123.1 12.3 127 38-200 5-140 (144)
89 2j9l_A Chloride channel protei 99.7 1.1E-15 3.8E-20 128.0 13.2 148 38-200 8-164 (185)
90 2d4z_A Chloride channel protei 99.7 7.1E-16 2.4E-20 134.8 12.3 125 140-267 11-246 (250)
91 2emq_A Hypothetical conserved 99.7 1.5E-15 5.2E-20 123.7 13.2 128 37-200 7-138 (157)
92 1y5h_A Hypothetical protein RV 99.6 3.9E-16 1.3E-20 123.5 9.2 119 40-196 7-126 (133)
93 3sl7_A CBS domain-containing p 99.6 4.8E-16 1.6E-20 129.6 10.1 149 40-200 3-155 (180)
94 3ctu_A CBS domain protein; str 99.6 1E-15 3.5E-20 124.6 11.6 126 38-200 12-141 (156)
95 1pvm_A Conserved hypothetical 99.6 1.9E-15 6.5E-20 126.6 12.1 119 40-196 8-128 (184)
96 2uv4_A 5'-AMP-activated protei 99.6 2.2E-15 7.5E-20 122.1 11.6 124 37-198 19-148 (152)
97 2zy9_A Mg2+ transporter MGTE; 99.6 2.3E-15 8E-20 143.9 13.6 121 140-269 153-279 (473)
98 3org_A CMCLC; transporter, tra 99.6 1.9E-16 6.4E-21 156.9 5.4 123 140-264 451-622 (632)
99 3pc3_A CG1753, isoform A; CBS, 99.6 1.2E-15 4.2E-20 148.2 11.0 124 141-269 383-513 (527)
100 1yav_A Hypothetical protein BS 99.6 2.2E-15 7.4E-20 123.1 10.7 128 37-200 10-141 (159)
101 3usb_A Inosine-5'-monophosphat 99.6 1.3E-15 4.3E-20 146.6 10.4 115 144-266 115-233 (511)
102 4af0_A Inosine-5'-monophosphat 99.6 9.2E-18 3.1E-22 157.0 -4.5 150 100-263 100-254 (556)
103 2oux_A Magnesium transporter; 99.6 3.7E-15 1.3E-19 133.7 11.5 121 34-199 130-257 (286)
104 4fxs_A Inosine-5'-monophosphat 99.6 2.3E-16 8E-21 151.1 2.5 114 143-264 90-206 (496)
105 2yvy_A MGTE, Mg2+ transporter 99.6 9.7E-15 3.3E-19 130.5 12.5 118 37-200 131-255 (278)
106 4avf_A Inosine-5'-monophosphat 99.5 4.9E-16 1.7E-20 148.8 -2.5 115 143-265 89-205 (490)
107 2zy9_A Mg2+ transporter MGTE; 99.5 1.2E-13 4.1E-18 132.1 12.6 120 35-199 149-275 (473)
108 3l2b_A Probable manganase-depe 99.5 1.1E-13 3.9E-18 121.2 11.4 167 1-196 33-239 (245)
109 3pc3_A CG1753, isoform A; CBS, 99.5 1.2E-13 3.9E-18 134.4 11.9 122 38-200 381-510 (527)
110 1zfj_A Inosine monophosphate d 99.5 2.6E-13 8.9E-18 130.9 13.6 115 144-266 92-210 (491)
111 1me8_A Inosine-5'-monophosphat 99.5 1.7E-15 6E-20 145.8 -1.9 116 146-268 100-222 (503)
112 3usb_A Inosine-5'-monophosphat 99.5 2.3E-13 8E-18 130.8 11.5 160 42-250 114-279 (511)
113 1me8_A Inosine-5'-monophosphat 99.4 1.2E-14 4.2E-19 139.9 1.7 167 42-254 97-269 (503)
114 3org_A CMCLC; transporter, tra 99.4 9.6E-14 3.3E-18 137.5 7.8 156 39-196 451-620 (632)
115 3ghd_A A cystathionine beta-sy 99.4 4.7E-13 1.6E-17 92.7 8.5 69 154-222 2-70 (70)
116 1vrd_A Inosine-5'-monophosphat 99.4 2.5E-14 8.5E-19 138.0 0.3 117 144-268 97-216 (494)
117 4fxs_A Inosine-5'-monophosphat 99.4 5.4E-13 1.8E-17 127.8 7.7 114 41-196 89-204 (496)
118 4avf_A Inosine-5'-monophosphat 99.3 4.4E-13 1.5E-17 128.4 4.8 115 41-197 88-203 (490)
119 2cu0_A Inosine-5'-monophosphat 99.3 1.1E-13 3.9E-18 132.8 0.2 112 144-265 95-206 (486)
120 1vrd_A Inosine-5'-monophosphat 99.3 1.3E-12 4.4E-17 126.0 4.7 116 42-199 96-213 (494)
121 1zfj_A Inosine monophosphate d 99.3 6.9E-11 2.3E-15 114.0 16.1 116 42-200 91-210 (491)
122 1jcn_A Inosine monophosphate d 99.3 1.1E-13 3.8E-18 134.0 -4.5 117 143-265 109-231 (514)
123 2cu0_A Inosine-5'-monophosphat 99.2 4.4E-12 1.5E-16 121.8 2.2 162 43-257 95-258 (486)
124 4af0_A Inosine-5'-monophosphat 99.1 1.1E-11 3.6E-16 116.4 3.2 108 44-196 141-253 (556)
125 3ghd_A A cystathionine beta-sy 99.1 2E-11 6.8E-16 84.4 2.8 53 1-54 18-70 (70)
126 3fio_A A cystathionine beta-sy 99.1 4.1E-10 1.4E-14 77.9 8.5 69 154-222 2-70 (70)
127 1jcn_A Inosine monophosphate d 99.1 1E-11 3.4E-16 120.3 -0.5 115 42-196 109-228 (514)
128 3fio_A A cystathionine beta-sy 98.6 1.2E-07 4.1E-12 65.2 6.5 48 218-266 1-48 (70)
129 2pli_A Uncharacterized protein 97.4 5.4E-05 1.8E-09 54.7 2.1 55 289-351 32-87 (91)
130 3llb_A Uncharacterized protein 97.4 3.9E-05 1.3E-09 54.4 1.1 55 289-351 23-78 (83)
131 3lae_A UPF0053 protein HI0107; 97.3 4.3E-05 1.5E-09 53.9 0.9 54 288-349 22-76 (81)
132 2pls_A CBS domain protein; APC 97.3 7.4E-05 2.5E-09 53.3 1.3 45 299-351 37-82 (86)
133 2oai_A Hemolysin; PFAM03471, x 97.2 7E-05 2.4E-09 54.4 0.8 45 299-351 45-90 (94)
134 2p13_A CBS domain; alpha-beta 97.2 9.2E-05 3.1E-09 53.3 1.4 54 290-351 30-86 (90)
135 2r2z_A Hemolysin; APC85144, en 97.2 0.00011 3.7E-09 53.3 1.8 55 289-351 30-87 (93)
136 2p3h_A Uncharacterized CBS dom 97.2 9.4E-05 3.2E-09 54.3 1.4 53 290-351 27-85 (101)
137 2p4p_A Hypothetical protein HD 97.1 0.00012 4.1E-09 52.2 1.4 56 288-351 22-80 (86)
138 2o3g_A Putative protein; APC85 97.1 8E-05 2.7E-09 53.9 0.4 55 289-351 31-88 (92)
139 2rk5_A Putative hemolysin; str 97.0 0.00011 3.9E-09 52.4 0.4 56 288-351 21-83 (87)
140 2nqw_A CBS domain protein; PFA 97.0 0.00021 7E-09 51.8 1.8 45 299-351 44-89 (93)
141 3ded_A Probable hemolysin; str 96.8 0.00022 7.5E-09 53.6 0.6 44 299-350 64-108 (113)
142 1tif_A IF3-N, translation init 57.3 16 0.00055 24.8 4.3 24 240-263 13-36 (78)
143 1tif_A IF3-N, translation init 56.4 20 0.00069 24.2 4.7 34 5-38 12-45 (78)
144 1p0z_A Sensor kinase CITA; tra 27.7 43 0.0015 24.7 3.1 16 243-258 106-121 (131)
145 3by8_A Sensor protein DCUS; hi 27.2 43 0.0015 25.2 3.0 88 161-262 41-130 (142)
146 3fan_A Non-structural protein; 25.5 36 0.0012 27.8 2.3 25 239-263 125-149 (213)
147 1svj_A Potassium-transporting 24.8 75 0.0025 24.6 4.0 34 163-196 121-154 (156)
148 1svj_A Potassium-transporting 24.3 69 0.0024 24.8 3.7 33 60-92 121-153 (156)
149 2w5e_A Putative serine proteas 21.7 53 0.0018 25.6 2.6 22 237-258 123-144 (163)
150 3tjo_A Serine protease HTRA1; 20.5 55 0.0019 27.1 2.6 20 239-258 187-206 (231)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=5.7e-33 Score=249.63 Aligned_cols=223 Identities=17% Similarity=0.265 Sum_probs=188.5
Q ss_pred CccCCcCEEEEEcC-CCcEEEEEehhHHHHHHHhc--------cC-----CCCccccccccccCCeEEeCCCcHHHHHHH
Q 017586 1 MAARRVDALLLTDS-NALLCGILTDKDIATRVIAR--------EL-----NLEETPVSKVMTRNPTFVLSDTLAVEALQK 66 (369)
Q Consensus 1 M~~~~~~~~~V~d~-~~~~~Givt~~di~~~~~~~--------~~-----~~~~~~v~dim~~~~i~v~~~~~l~ea~~~ 66 (369)
|.+++++++||+|+ +|+++|++|.+|+++.+... .. ...+.+++++|.++++++++++++.+|++.
T Consensus 30 m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~ 109 (280)
T 3kh5_A 30 MNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIET 109 (280)
T ss_dssp HHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHH
T ss_pred HHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHH
Confidence 56889999999996 78999999999998644110 00 112568999999999999999999999999
Q ss_pred HHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCcc
Q 017586 67 MVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLS 145 (369)
Q Consensus 67 m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 145 (369)
|.+++++++||+| +|+++|+++..|+++..... .....+++
T Consensus 110 ~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~--------------------------------------~~~~~~v~ 151 (280)
T 3kh5_A 110 FLTKNVGGAPIVNDENQLISLITERDVIRALLDK--------------------------------------IDENEVID 151 (280)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG--------------------------------------SCTTCBSG
T ss_pred HHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc--------------------------------------CCCCCCHH
Confidence 9999999999998 69999999999987652110 01123688
Q ss_pred ccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCC-----------Cccccccccc
Q 017586 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-----------PADSTLVEKV 214 (369)
Q Consensus 146 ~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~-----------~~~~~~v~~~ 214 (369)
++|. +++.++++++++.++++.|.+++++++||+++|+++|++|.+|++ +.+..+. .....++.++
T Consensus 152 ~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (280)
T 3kh5_A 152 DYIT--RDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFI-KLLGSDWAFNHMQTGNVREITNVRMEEI 228 (280)
T ss_dssp GGCB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHTSHHHHHHHHSCCTHHHHHCBHHHH
T ss_pred HHhC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH-HHHhhhhhhhhhcccchhhhhCCcHHHH
Confidence 9998 578999999999999999999999999999989999999999998 4443211 0125689999
Q ss_pred cccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHH
Q 017586 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 215 m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~ 264 (369)
|++++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||+++
T Consensus 229 m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 229 MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 99999999999999999999999999999999999999999999999874
No 2
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=5.5e-33 Score=251.98 Aligned_cols=227 Identities=20% Similarity=0.211 Sum_probs=192.3
Q ss_pred CccCCcCEEEEEcCCCcEEEEEehhHHHHHHHhcc---------CCCCccccccccccCCeEEeCCCcHHHHHHHHHhCC
Q 017586 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE---------LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK 71 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~di~~~~~~~~---------~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~ 71 (369)
|.+++++++||+| ++++|++|.+||++.+.... ......+++++|+++++++.+++++.+|++.|.+++
T Consensus 46 m~~~~~~~~~V~d--~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~ 123 (296)
T 3ddj_A 46 INEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRN 123 (296)
T ss_dssp TTGGGCCEEEEES--SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHT
T ss_pred HHHCCCceEEEEC--CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcC
Confidence 7889999999998 89999999999986543211 112357899999999999999999999999999999
Q ss_pred CcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccC
Q 017586 72 FRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPE 150 (369)
Q Consensus 72 ~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~ 150 (369)
++++||+| +++++|+++..|++.... ......+++++|.
T Consensus 124 ~~~lpVvd~~~~lvGivt~~dl~~~~~---------------------------------------~~~~~~~v~~~m~- 163 (296)
T 3ddj_A 124 FGSLPVVDINDKPVGIVTEREFLLLYK---------------------------------------DLDEIFPVKVFMS- 163 (296)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHGGGGG---------------------------------------GSCCCCBHHHHSB-
T ss_pred CCEEEEEcCCCcEEEEEeHHHHHHhhh---------------------------------------cccccccHHHhhc-
Confidence 99999998 689999999999875410 0122346888887
Q ss_pred CCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcC-----CCccccccccccccCceeecC
Q 017586 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-----LPADSTLVEKVMTPNPECATI 224 (369)
Q Consensus 151 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~-----~~~~~~~v~~~m~~~~~~v~~ 224 (369)
+++.++++++++.++++.|.+++++++||++ +|+++|++|.+|+++.+.... ......++.++|.++++++++
T Consensus 164 -~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~ 242 (296)
T 3ddj_A 164 -TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDE 242 (296)
T ss_dssp -CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCT
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECC
Confidence 5789999999999999999999999999999 899999999999984433110 001246899999999999999
Q ss_pred CCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhc
Q 017586 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 225 ~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~ 270 (369)
++++.+|++.|.+++.+++||+|++|+++|+||+.||++++.....
T Consensus 243 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 243 LASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998877653
No 3
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.97 E-value=9.5e-31 Score=240.19 Aligned_cols=231 Identities=16% Similarity=0.182 Sum_probs=185.4
Q ss_pred CccCCcCEEEEEcCCC-cEEEEEehhHHHHHHHhc---cC------CCCccc------cccccccCCeEEeCCCcHHHHH
Q 017586 1 MAARRVDALLLTDSNA-LLCGILTDKDIATRVIAR---EL------NLEETP------VSKVMTRNPTFVLSDTLAVEAL 64 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~-~~~Givt~~di~~~~~~~---~~------~~~~~~------v~dim~~~~i~v~~~~~l~ea~ 64 (369)
|.+++++++||+|+++ +++|++|.+|++..+... .. ...... +.++|.++++++++++++.+|+
T Consensus 58 m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~ 137 (323)
T 3t4n_C 58 LLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEAC 137 (323)
T ss_dssp HHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHH
T ss_pred HHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHH
Confidence 5689999999999754 899999999999765421 00 011122 3345578899999999999999
Q ss_pred HHHHhCCCcEeeEee-CCe-----EEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHH
Q 017586 65 QKMVQGKFRHLPVVE-NGE-----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRER 138 (369)
Q Consensus 65 ~~m~~~~~~~lpVvd-~~~-----~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 138 (369)
+.|.+++++++||+| ++. ++|+++..|+++........ ..
T Consensus 138 ~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~----------------------------------~~ 183 (323)
T 3t4n_C 138 LKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE----------------------------------TH 183 (323)
T ss_dssp HHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG----------------------------------GG
T ss_pred HHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc----------------------------------hh
Confidence 999999999999998 453 99999999998763321100 11
Q ss_pred hcCCCcccc---ccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-Ccccccccc
Q 017586 139 MFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEK 213 (369)
Q Consensus 139 ~~~~~v~~i---m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~-~~~~~~v~~ 213 (369)
....+++++ |. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....++.+
T Consensus 184 ~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~v~~ 260 (323)
T 3t4n_C 184 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGE 260 (323)
T ss_dssp GCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHH-HHHHTTHHHHTTSBHHH
T ss_pred hhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHH-HHHhhchhhhccCCHHH
Confidence 334568888 76 6799999999999999999999999999999 79999999999998 4444332 223568999
Q ss_pred cccc------CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHH
Q 017586 214 VMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 214 ~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~ 268 (369)
+|++ +++++++++++.+|++.|.+++++++||+|++|+++|+||..||+++++++
T Consensus 261 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 261 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 9987 789999999999999999999999999999999999999999999988764
No 4
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=7.9e-31 Score=235.99 Aligned_cols=219 Identities=18% Similarity=0.246 Sum_probs=174.3
Q ss_pred CccCCcCEEEEEcCCCcEEEEEehhHHHHHHHhccCCCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-
Q 017586 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE- 79 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~di~~~~~~~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd- 79 (369)
|.+++++++||+|++|+++|++|.+|+++. +.+.+++++|.++++++++++++.+|++.|.+++++.+||+|
T Consensus 27 ~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~-------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 27 FKKYKVRSFPVVNKEGKLVGIISVKRILVN-------PDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp -----CCEEEEECTTCCEEEEEESSCC-----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHcCCCeEEEEcCCCcEEEEEEHHHHHhh-------hccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 567899999999988999999999999843 235789999999899999999999999999999999999998
Q ss_pred CCeEEEEEehHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEEC
Q 017586 80 NGEVIALLDIAKCLY-DAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTIS 158 (369)
Q Consensus 80 ~~~~vGiv~~~dil~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~ 158 (369)
+|+++|+++..|+++ ..... ......+++++|. .++.+++
T Consensus 100 ~~~~~Giit~~di~~~~~~~~-------------------------------------~~~~~~~v~~~m~--~~~~~v~ 140 (282)
T 2yzq_A 100 KGKPVGILTVGDIIRRYFAKS-------------------------------------EKYKGVEIEPYYQ--RYVSIVW 140 (282)
T ss_dssp TSCEEEEEEHHHHHHHTTTTC-------------------------------------SGGGGCBSTTTSB--SCCCCEE
T ss_pred CCEEEEEEEHHHHHHHHHhcc-------------------------------------CCcccCcHHHHhC--CCCEEEC
Confidence 589999999999886 31100 0012345788997 5788999
Q ss_pred CCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH------HHHH------hc-----------------CCCccc
Q 017586 159 PTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL------MRVI------SQ-----------------NLPADS 208 (369)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll------~~~~------~~-----------------~~~~~~ 208 (369)
+++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+. .. ......
T Consensus 141 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T 2yzq_A 141 EGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPN 220 (282)
T ss_dssp TTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CC
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhcc
Confidence 999999999999999999999998 78999999999997 2221 00 011135
Q ss_pred cccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 209 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
.+++++|++++.++++++++.+|+++|.+++++++||+|++|+++|+||+.||++++
T Consensus 221 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~ 277 (282)
T 2yzq_A 221 KPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVL 277 (282)
T ss_dssp CBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGG
T ss_pred CCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHH
Confidence 689999999999999999999999999999999999999888999999999999743
No 5
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.96 E-value=9.3e-29 Score=227.97 Aligned_cols=232 Identities=15% Similarity=0.164 Sum_probs=185.6
Q ss_pred CccCCcCEEEEEcCC-CcEEEEEehhHHHHHHHhccC---CC------Ccccccc-------ccccCC--eEEeCCCcHH
Q 017586 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIAREL---NL------EETPVSK-------VMTRNP--TFVLSDTLAV 61 (369)
Q Consensus 1 M~~~~~~~~~V~d~~-~~~~Givt~~di~~~~~~~~~---~~------~~~~v~d-------im~~~~--i~v~~~~~l~ 61 (369)
|.+++++++||+|++ ++++|++|.+|+++.+..... .. ...++.+ +|.+++ +++.+++++.
T Consensus 50 ~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~ 129 (334)
T 2qrd_G 50 LTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLM 129 (334)
T ss_dssp HHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHH
T ss_pred HHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHH
Confidence 467889999999976 789999999999865432100 11 1333333 466667 8999999999
Q ss_pred HHHHHHHhCCCcEeeEee-C-Ce----EEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHH
Q 017586 62 EALQKMVQGKFRHLPVVE-N-GE----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135 (369)
Q Consensus 62 ea~~~m~~~~~~~lpVvd-~-~~----~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 135 (369)
+|++.|.+++++++||+| + ++ ++|+++..|+++.......
T Consensus 130 ~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~---------------------------------- 175 (334)
T 2qrd_G 130 DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK---------------------------------- 175 (334)
T ss_dssp HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG----------------------------------
T ss_pred HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc----------------------------------
Confidence 999999999999999998 3 34 9999999999876322100
Q ss_pred HHHhcCCCccc---cccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-Cccccc
Q 017586 136 RERMFRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTL 210 (369)
Q Consensus 136 ~~~~~~~~v~~---im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~-~~~~~~ 210 (369)
.......++++ +|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....+
T Consensus 176 ~~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~ 252 (334)
T 2qrd_G 176 ETAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVM-HLIQDGDYSNLDLS 252 (334)
T ss_dssp GGGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHH-HHHTTSCGGGGGSB
T ss_pred chhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHH-HHhhccccccccCc
Confidence 00123456777 476 6788999999999999999999999999999 78999999999998 5444332 223578
Q ss_pred ccccccc------CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 211 VEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 211 v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
+.++|.+ ++.++++++++.+|++.|.+++++++||+|++|+++|+||..||++++....
T Consensus 253 v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 253 VGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp HHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred HHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 9999984 8899999999999999999999999999999999999999999999876544
No 6
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.96 E-value=1.4e-28 Score=226.48 Aligned_cols=234 Identities=18% Similarity=0.217 Sum_probs=183.6
Q ss_pred CccCCcCEEEEEcCC-CcEEEEEehhHHHHHHHhcc-------CCCCccc-------cccccccCCeEEeCCCcHHHHHH
Q 017586 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIARE-------LNLEETP-------VSKVMTRNPTFVLSDTLAVEALQ 65 (369)
Q Consensus 1 M~~~~~~~~~V~d~~-~~~~Givt~~di~~~~~~~~-------~~~~~~~-------v~dim~~~~i~v~~~~~l~ea~~ 65 (369)
|.+++++++||+|++ ++++|++|.+|+++.+.... ..+...+ +.++|.++++++++++++.+|++
T Consensus 63 ~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~ 142 (330)
T 2v8q_E 63 LVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVS 142 (330)
T ss_dssp HHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHH
T ss_pred HHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHH
Confidence 467899999999977 68999999999996554321 0111222 35678999999999999999999
Q ss_pred HHHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCC
Q 017586 66 KMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPS 143 (369)
Q Consensus 66 ~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 143 (369)
.|.+++++++||+| +|+++|+++..|+++...... +.. ... . ....+
T Consensus 143 ~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~---------------------~~~-~~~-~--------~~~~~ 191 (330)
T 2v8q_E 143 SLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFI---------------------TEF-PKP-E--------FMSKS 191 (330)
T ss_dssp HHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHS---------------------CSS-SCC-G--------GGGSB
T ss_pred HHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHh---------------------hcc-Cch-h--------hhcCC
Confidence 99999999999998 589999999999987532110 000 000 0 01122
Q ss_pred cccc--ccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcC-CCcccccccccc----
Q 017586 144 LSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVM---- 215 (369)
Q Consensus 144 v~~i--m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~-~~~~~~~v~~~m---- 215 (369)
++++ |. ..++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +..... ......++.++|
T Consensus 192 v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~-~~~~~~~~~~~~~~v~~~~~~~~ 269 (330)
T 2v8q_E 192 LEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRS 269 (330)
T ss_dssp HHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTG-GGGGSSCCCCCSSBHHHHGGGCC
T ss_pred HHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHH-HHHhccccccccCcHHHHHhccc
Confidence 3333 32 14688999999999999999999999999999 89999999999997 444332 222256788888
Q ss_pred --ccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 216 --TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 216 --~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
.+++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 270 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 270 HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 4789999999999999999999999999999999999999999999997654
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.96 E-value=1.5e-28 Score=222.76 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=167.9
Q ss_pred cCCCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 35 ~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+.+....+|+|+|+++++++++++++.+|++.|.+++++++||++ ++++|++|..|+++.......
T Consensus 14 ~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~------------- 79 (296)
T 3ddj_A 14 NLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCK------------- 79 (296)
T ss_dssp CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC--------------
T ss_pred hhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhccccc-------------
Confidence 335667899999999999999999999999999999999999999 999999999999875221000
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehH
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (369)
...+...+. .....+++++|. +++.++.+++++.++++.|.+++++++||++ +++++|++|.+
T Consensus 80 -------------~~~~~~~~~-~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~ 143 (296)
T 3ddj_A 80 -------------DSCSQGDLY-HISTTPIIDYMT--PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTER 143 (296)
T ss_dssp ---------------CCHHHHH-HHHTSBGGGTSE--ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred -------------ccccchhhH-HHhcccHHHhcc--CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 001111111 123567999998 5788999999999999999999999999998 78999999999
Q ss_pred HHHHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 194 dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
|++ +.+..... ..++.++|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++..
T Consensus 144 dl~-~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 144 EFL-LLYKDLDE--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp HHG-GGGGGSCC--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHH-Hhhhcccc--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 997 54443322 458999999999999999999999999999999999999999999999999999987653
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.95 E-value=3.6e-27 Score=211.70 Aligned_cols=194 Identities=19% Similarity=0.290 Sum_probs=157.4
Q ss_pred ccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Q 017586 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (369)
Q Consensus 44 ~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (369)
..+|+++++++++++|+.+|++.|.+++++++||+| +++++|+++..|++......... . .. +...
T Consensus 7 ~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~------~---~~---~~~~ 74 (280)
T 3kh5_A 7 KIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKY------N---LI---REKH 74 (280)
T ss_dssp GTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGG------H---HH---HTTS
T ss_pred HHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchh------h---hh---hhcc
Confidence 446778999999999999999999999999999998 59999999999998752110000 0 00 0000
Q ss_pred CCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHH
Q 017586 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 200 (369)
Q Consensus 122 g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~ 200 (369)
...+.. ....+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+
T Consensus 75 ----------~~~~~~-~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~ 140 (280)
T 3kh5_A 75 ----------ERNFLA-AINEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI-RAL 140 (280)
T ss_dssp ----------TTCHHH-HTTSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HHH
T ss_pred ----------ccchhH-HhhhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH-HHH
Confidence 000111 12467999998 5789999999999999999999999999998 89999999999998 554
Q ss_pred hcCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 201 ~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
...... ..++.++|.+++.++++++++.++++.|.+++.+++||+ ++|+++|+||..|+++++
T Consensus 141 ~~~~~~-~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 141 LDKIDE-NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp GGGSCT-TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHH
T ss_pred hhcCCC-CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHH
Confidence 443332 458999999999999999999999999999999999999 589999999999999865
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.94 E-value=2.8e-26 Score=206.22 Aligned_cols=178 Identities=27% Similarity=0.378 Sum_probs=140.0
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 017586 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
++++++|+++++++++++++.+|++.|.+++++++||+| +|+++|+++..|++..
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~------------------------ 56 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVN------------------------ 56 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC---------------------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhh------------------------
Confidence 368899999999999999999999999999999999999 7999999999998743
Q ss_pred hcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHH
Q 017586 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~ 198 (369)
....+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|.+|++++
T Consensus 57 -------------------~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~ 115 (282)
T 2yzq_A 57 -------------------PDEEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRR 115 (282)
T ss_dssp --------------------------CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred -------------------hccCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 01235788898 4688999999999999999999999999999 6899999999999841
Q ss_pred HHhcCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHH
Q 017586 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 199 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~ 263 (369)
.+..+......++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||..|+++
T Consensus 116 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 116 YFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp TTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGG
T ss_pred HHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhh
Confidence 55432222356889999989999999999999999999999999999999999999999999983
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.93 E-value=3.3e-25 Score=203.23 Aligned_cols=206 Identities=16% Similarity=0.233 Sum_probs=156.8
Q ss_pred Ccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 39 EETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+.++.|+|.+ ++++++.++|+.+|++.|.+++++++||+|+ ++++|+++..|++..+......... .
T Consensus 28 ~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~--------~ 99 (323)
T 3t4n_C 28 NSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDK--------F 99 (323)
T ss_dssp HHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGG--------G
T ss_pred HhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcch--------h
Confidence 57799999985 6789999999999999999999999999983 5999999999998764432211000 0
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCE-----EEE
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK-----PRG 188 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~-----~~G 188 (369)
..+.. .. ...+.+.+ ++.++|. ++++++++++++.+|++.|.+++++++||++ ++. ++|
T Consensus 100 ~~l~~-------~~---~~~v~~i~---~~~~~~~--~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~G 164 (323)
T 3t4n_C 100 ELVDK-------LQ---LDGLKDIE---RALGVDQ--LDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVS 164 (323)
T ss_dssp GGGGG-------CB---HHHHHHHH---HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEE
T ss_pred HHHHH-------HH---HHHHHHHH---HHhCCCC--CCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEE
Confidence 00000 00 01111111 1334555 5788999999999999999999999999999 553 999
Q ss_pred EeehHHHHHHHHhcC--CCccccccccc---cccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHH
Q 017586 189 ILTSKDILMRVISQN--LPADSTLVEKV---MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 189 ivt~~dll~~~~~~~--~~~~~~~v~~~---m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~ 263 (369)
++|.+|+++.+.... ......++.++ |.++++++++++++.+|++.|.+++++++||+|++|+++|+||..|+++
T Consensus 165 ivt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~ 244 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLG 244 (323)
T ss_dssp EEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHH
T ss_pred EecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 999999984433221 11224588999 8889999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 017586 264 AAVA 267 (369)
Q Consensus 264 ~~~~ 267 (369)
++..
T Consensus 245 ~~~~ 248 (323)
T 3t4n_C 245 LIKG 248 (323)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 6643
No 11
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.92 E-value=8.4e-25 Score=201.15 Aligned_cols=202 Identities=21% Similarity=0.190 Sum_probs=155.7
Q ss_pred cccccccc--ccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 40 ETPVSKVM--TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim--~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+++|+| .++++++++++++.+|++.|.+++++++||++ + ++++|+++..|++.............
T Consensus 34 ~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~--------- 104 (330)
T 2v8q_E 34 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQ--------- 104 (330)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTT---------
T ss_pred cCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccc---------
Confidence 56999999 77899999999999999999999999999998 4 69999999999987644322110000
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeehH
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSK 193 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~ 193 (369)
... ........+.. .++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+
T Consensus 105 ------~~~--l~~~~~~~~~~-----~~~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~ 169 (330)
T 2v8q_E 105 ------IYE--LEEHKIETWRE-----VYLQDSF--KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHK 169 (330)
T ss_dssp ------CCC--GGGCBHHHHHH-----HHSSSSC--CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHH
T ss_pred ------hhH--HhhccHHHHHH-----HHhhccc--CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHH
Confidence 000 00000111111 2457787 5799999999999999999999999999998 68999999999
Q ss_pred HHHHHHHhcCCC-----ccccccccc--cc-cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 194 DILMRVISQNLP-----ADSTLVEKV--MT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 194 dll~~~~~~~~~-----~~~~~v~~~--m~-~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
|+++.+...... ....++.++ |. +++.++++++++.++++.|.+++.+++||+|++|+++|+||..|++++.
T Consensus 170 dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~ 249 (330)
T 2v8q_E 170 RILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLA 249 (330)
T ss_dssp HHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGG
T ss_pred HHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHH
Confidence 998443322111 112345554 54 6889999999999999999999999999999999999999999999743
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.91 E-value=1.2e-23 Score=193.77 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=154.8
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
..+++|+|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|++.............. ...
T Consensus 21 ~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~-----~~~ 95 (334)
T 2qrd_G 21 SRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPE-----AIA 95 (334)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGG-----GGG
T ss_pred cCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCcc-----HHH
Confidence 5799999975 5789999999999999999999999999984 799999999999876433211000000 000
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CE----EEEE
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NK----PRGI 189 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~----~~Gi 189 (369)
.+. . .....+.+. .+++|.+..+++++++++++.++++.|.+++++++||++ + ++ ++|+
T Consensus 96 ~~~-------~---~~~~~i~~~-----l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 96 EID-------K---FRLLGLREV-----ERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp GGG-------S---CBHHHHHHH-----HHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHh-------h---hchhhHHHH-----HHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 000 0 001111111 134565323348999999999999999999999999998 4 34 9999
Q ss_pred eehHHHHHHHHhcCC--Ccccccccc---ccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHH
Q 017586 190 LTSKDILMRVISQNL--PADSTLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 190 vt~~dll~~~~~~~~--~~~~~~v~~---~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~ 264 (369)
+|.+|+++.+..... .....++.+ +|.+++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++++
T Consensus 161 vt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~ 240 (334)
T 2qrd_G 161 LTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHL 240 (334)
T ss_dssp EEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHH
T ss_pred eeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHH
Confidence 999999844332110 112357788 588899999999999999999999999999999999999999999999986
Q ss_pred HH
Q 017586 265 AV 266 (369)
Q Consensus 265 ~~ 266 (369)
+.
T Consensus 241 ~~ 242 (334)
T 2qrd_G 241 IQ 242 (334)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 13
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.88 E-value=3.9e-22 Score=162.85 Aligned_cols=129 Identities=19% Similarity=0.250 Sum_probs=112.9
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCC---ccccccccccc
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP---ADSTLVEKVMT 216 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~---~~~~~v~~~m~ 216 (369)
..++.++|+|+.++.++.+++|+.+|++.|.+++++++||++ +++++|++|.+|+++........ ....++.++|.
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~ 93 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCB
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhc
Confidence 346899999999999999999999999999999999999999 79999999999998555443322 12568999999
Q ss_pred cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcc
Q 017586 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRN 271 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~ 271 (369)
+++.++++++++.+|++.|.+++ .+||||++|+++|+||+.||++++.+.+.+
T Consensus 94 ~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 94 TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp CSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC
T ss_pred CCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhcc
Confidence 99999999999999999998876 499999999999999999999998776644
No 14
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=6.1e-22 Score=156.73 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=110.3
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeehHHHHHHHHhcCCCccccccccccccCc
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|+|+.+++++++++++.+|++.|.+++++++||++ +++++|++|.+|++ +.+..+......++.++| +++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~-~~~~~~~~~~~~~v~~~m-~~~ 79 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAY-RLMTEKKEFTKEIMLRAA-DEI 79 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHH-HHHTSSSCCCHHHHHHHS-BCC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHH-HHHhccCccchhhHHHhc-cCC
Confidence 35889998767899999999999999999999999999996 47999999999997 555444333346789999 688
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++++++++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 80 YFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp CEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred eEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999988764
No 15
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.86 E-value=3.4e-21 Score=155.98 Aligned_cols=126 Identities=18% Similarity=0.211 Sum_probs=114.1
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+++.++.++++++++.+|++.|.+++++++||++ + |+++|++|.+|+++...... ..++.++|
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 94 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL- 94 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-
Confidence 55678999999766899999999999999999999999999999 5 89999999999984443332 46899999
Q ss_pred cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
+++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++++
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 89999999999999999999999999999999999999999999999998865
No 16
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.86 E-value=2.3e-21 Score=161.12 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=113.1
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +....+. ..++.++|
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~---~~~v~~im- 113 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL-SESIAGE---RLELVDLV- 113 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH-HHHHTTC---CCCGGGGC-
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH-HHHhhcC---cccHHHHh-
Confidence 45567999999877899999999999999999999999999999 5 8999999999998 4444332 56899999
Q ss_pred cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcccC
Q 017586 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRNTA 273 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~~~ 273 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||+.||++++++++.++.
T Consensus 114 ~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de~ 170 (172)
T 3lhh_A 114 KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQED 170 (172)
T ss_dssp BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC---
T ss_pred cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCcccc
Confidence 899999999999999999999999999999999999999999999999998886554
No 17
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.86 E-value=4.9e-22 Score=158.58 Aligned_cols=129 Identities=19% Similarity=0.212 Sum_probs=108.3
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccCc
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|+|+.++.++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +.+.... ....++.++|. ++
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~-~~~~~v~~~m~-~~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLL-PLILKAD-GDSDDVKKLLR-PA 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGGSSS-GGGCCGGGTCB-CC
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHhcc-CCCcCHHHHcC-CC
Confidence 46889999777899999999999999999999999999999 5 7999999999997 4443222 23678999996 58
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcccC
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRNTA 273 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~~~ 273 (369)
.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++++.++.
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de~ 133 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEH 133 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--------
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCcc
Confidence 999999999999999999999999999999999999999999999988876554
No 18
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.85 E-value=1.9e-21 Score=153.83 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=109.0
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+++..++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +....+.. ..++.++|
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~~~~--~~~v~~~m- 78 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELF-KMQQSGSG--QKQLGAVM- 78 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHH-HHHHTTTT--TSBHHHHS-
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHH-HHHhcCCC--cCCHHHHh-
Confidence 34567999999877788999999999999999999999999999 5 8999999999998 44443332 56899999
Q ss_pred cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
+++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++
T Consensus 79 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 79 RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 578999999999999999999999999999999999999999999998765
No 19
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.85 E-value=4.3e-21 Score=151.62 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=109.6
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccC
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~ 218 (369)
..+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +.... ...++.++|. +
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~----~~~~v~~~m~-~ 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLL-RYMLE----PALDIRSLVR-P 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGG-GGGTC----TTSCGGGGCB-C
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHH-hHhcc----CCcCHHHHhC-C
Confidence 456899999877889999999999999999999999999999 4 8999999999997 44332 2567999995 6
Q ss_pred ceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
+.++++++++.+|++.|.+++.+++||+|++|+++|+||+.|+++++++++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 889999999999999999999999999999999999999999999998865
No 20
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.85 E-value=4.7e-21 Score=156.04 Aligned_cols=131 Identities=15% Similarity=0.179 Sum_probs=111.5
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEE-e--CCEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~-~--~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
+...+++++|+++.+++++++++++.+|++.|.+++++++||+ + +++++|++|.+|+++.+.... ..++.++|
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m 92 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KAKISTIM 92 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TSBGGGTC
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CCcHHHHh
Confidence 3456799999976689999999999999999999999999999 5 489999999999984443332 56899999
Q ss_pred ccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcccCC
Q 017586 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRNTAG 274 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~~~~ 274 (369)
+++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++++.++.+
T Consensus 93 -~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~~ 150 (153)
T 3oco_A 93 -RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQD 150 (153)
T ss_dssp -BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-------
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCccc
Confidence 8999999999999999999999999999999999999999999999999988866543
No 21
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.84 E-value=1.2e-20 Score=156.67 Aligned_cols=131 Identities=15% Similarity=0.176 Sum_probs=115.0
Q ss_pred HhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017586 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|+|+++++++++++++.+|++.|.+++++++||++ + ++++|+||.+|++....... ..++. +|
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----~~~v~-~~ 106 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----RVRRN-RL 106 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----SCCGG-GS
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----cchhH-hc
Confidence 456778999999767899999999999999999999999999998 5 79999999999984443321 35677 44
Q ss_pred ccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcccCC
Q 017586 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRNTAG 274 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~~~~ 274 (369)
++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++++++++.++.+
T Consensus 107 -~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~ 164 (173)
T 3ocm_A 107 -RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDE 164 (173)
T ss_dssp -BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTS
T ss_pred -CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCccc
Confidence 7889999999999999999999999999999999999999999999999998876554
No 22
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.84 E-value=4.6e-21 Score=151.02 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=106.7
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccCc
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|.++.++.++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +.+.... ...+++++|. ++
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~--~~~~v~~~m~-~~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDA--EAFSMDKVLR-TA 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGSTTC--CCCCHHHHCB-CC
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhccC--CCCCHHHHcC-CC
Confidence 46889999755689999999999999999999999999999 5 7999999999997 4443322 2568999995 58
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
.++++++++.+|++.|.+++.+++||+|++|+++|+||+.||++++++
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999999999999999999997765
No 23
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.83 E-value=4.5e-21 Score=159.00 Aligned_cols=144 Identities=23% Similarity=0.301 Sum_probs=114.0
Q ss_pred CCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+.+.+|+|+|+++++++++++++.+|++.|.+++++++||+| +|+++|++|.+|+++............ .
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~---------~ 85 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASE---------I 85 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHH---------H
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhh---------h
Confidence 456899999999999999999999999999999999999998 799999999999986532111000000 0
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll 196 (369)
. .............+.....+++++|+ ++++++++++++.+|++.|.+++++++||+++|+++|+||.+|++
T Consensus 86 ----~--~~~~~~~~~~~~~~~~~~~~v~~im~--~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil 157 (170)
T 4esy_A 86 ----L--SRAIPAPEVEHLFETGRKLTASAVMT--QPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLL 157 (170)
T ss_dssp ----H--TTTSCHHHHHHHHHHHTTCBHHHHCB--CCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ----h--hhccchhhHHhhhccccccchhhhcc--cCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHH
Confidence 0 00111122333445566778999998 689999999999999999999999999999999999999999998
Q ss_pred HH
Q 017586 197 MR 198 (369)
Q Consensus 197 ~~ 198 (369)
+.
T Consensus 158 ~~ 159 (170)
T 4esy_A 158 KL 159 (170)
T ss_dssp TT
T ss_pred HH
Confidence 33
No 24
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.83 E-value=8.6e-21 Score=157.32 Aligned_cols=127 Identities=24% Similarity=0.251 Sum_probs=109.4
Q ss_pred HHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-----------
Q 017586 137 ERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL----------- 204 (369)
Q Consensus 137 ~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~----------- 204 (369)
..+...+++++|+ ++++++++++++.+|++.|.+++++++||+| +|+++|+||.+|+++. .....
T Consensus 13 ~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~-~~~~~~~~~~~~~~~~ 89 (170)
T 4esy_A 13 RAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRG-SIPFWIYEASEILSRA 89 (170)
T ss_dssp HHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGG-TCCTTHHHHHHHHTTT
T ss_pred HHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHH-Hhhccccchhhhhhhc
Confidence 3455678999998 6899999999999999999999999999999 8999999999999732 11110
Q ss_pred -----------CccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 205 -----------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 205 -----------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
.....++.++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||+.||+++++.
T Consensus 90 ~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 90 IPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp SCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred cchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 0114578999999999999999999999999999999999998 6999999999999986643
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.82 E-value=2.4e-19 Score=142.14 Aligned_cols=125 Identities=28% Similarity=0.410 Sum_probs=111.8
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCce
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
..+++++|. +++.++++++++.+|++.|.+++++.+||+++|+++|++|.+|++ +.+..+.. ...++.++|.+++.
T Consensus 3 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 3 EEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKS-LETKAEEFMTASLI 78 (133)
T ss_dssp CCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCC-TTCBGGGTSEECCC
T ss_pred cccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCC-cccCHHHHcCCCCE
Confidence 457899998 468899999999999999999999999999988999999999997 55544332 25789999998999
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
++++++++.++++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876654
No 26
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.81 E-value=1.1e-19 Score=143.30 Aligned_cols=122 Identities=13% Similarity=0.082 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCce
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
..+++++|. +++.++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +.+..+.. ...+++++|.+++.
T Consensus 4 s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWPT-VKEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSCC-TTCBCCGGGCBCCC
T ss_pred ceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCCc-ccCcHHHHccCCCc
Confidence 456899998 578999999999999999999999999999999999999999997 44433322 13679999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++.
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998764
No 27
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.81 E-value=1.2e-19 Score=144.25 Aligned_cols=124 Identities=27% Similarity=0.464 Sum_probs=109.7
Q ss_pred CccccccCC-CceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCcee
Q 017586 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (369)
Q Consensus 143 ~v~~im~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 221 (369)
+++++|.|+ +++.++++++++.+|++.|.+++++++||+++++++|++|.+|+++.+...+......++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 578888743 5689999999999999999999999999999899999999999974455444333467899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 222 v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
+++++++.+|++.|.+++.+++||+| +|+++|+||..|+++++..
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999 7999999999999987654
No 28
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.81 E-value=1.5e-19 Score=147.47 Aligned_cols=132 Identities=19% Similarity=0.253 Sum_probs=113.3
Q ss_pred HhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCC---cccccccc
Q 017586 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP---ADSTLVEK 213 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~---~~~~~v~~ 213 (369)
.+...+++++|+|..++.++++++++.+|++.|.+++++++||++ +|+++|++|.+|+++........ ....++.+
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~ 90 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH 90 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH
Confidence 344567999999877899999999999999999999999999999 89999999999998444432211 11468999
Q ss_pred ccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcc
Q 017586 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRN 271 (369)
Q Consensus 214 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~ 271 (369)
+|.+++.++++++++.+|++.|.+++ ++||+|++|+++|+||..||++++...+..
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 91 MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 99999999999999999999999886 699999999999999999999988877644
No 29
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.81 E-value=1.5e-19 Score=146.56 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=112.5
Q ss_pred HhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-----Ccccccc
Q 017586 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLV 211 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~-----~~~~~~v 211 (369)
.+...+++++|.+..++.++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v 89 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMIL-DGILGLERIEFERLEEMKV 89 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHTBCSSSBCGGGGGGCBG
T ss_pred hhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHH-HHHHhhcccchhHHhcCCH
Confidence 344567999999755799999999999999999999999999999 89999999999997 4443211 1235789
Q ss_pred ccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhc
Q 017586 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 212 ~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~ 270 (369)
.++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+.
T Consensus 90 ~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 90 EQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp GGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred HHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhH
Confidence 99999999999999999999999999986 9999999999999999999998877664
No 30
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.81 E-value=9e-19 Score=143.42 Aligned_cols=133 Identities=20% Similarity=0.218 Sum_probs=115.9
Q ss_pred HHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccc
Q 017586 134 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (369)
Q Consensus 134 ~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~ 212 (369)
.+...+...+++++|.+ ++++.+++++.+|++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++.
T Consensus 9 ~l~~~l~~~~v~~im~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~ 84 (159)
T 3fv6_A 9 LLADKLKKLQVKDFQSI---PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLL-RASIGQQELTSVPVH 84 (159)
T ss_dssp HHHHHHTTCBGGGSCBC---CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHTSCSCTTTCBGG
T ss_pred HHHHHHhhCCHHHHcCC---CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH-HHhhccCcccCcCHH
Confidence 35566777889999983 55999999999999999999999999999 89999999999998 444333333467899
Q ss_pred ccccc--CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCC---cEEEEEehhHHHHHHHHHhc
Q 017586 213 KVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 213 ~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g---~~~Givt~~Di~~~~~~~~~ 270 (369)
++|.+ ++.++++++++.+|++.|.+++.+++||+|++| +++|+||..||++++.....
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhh
Confidence 99988 889999999999999999999999999999888 99999999999998776543
No 31
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.80 E-value=4.2e-19 Score=141.71 Aligned_cols=128 Identities=24% Similarity=0.446 Sum_probs=113.0
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
+...+++++|. +++.++++++++.+|++.|.+++++.+||++ +|+++|++|.+|++++++..+. ....++.++|.+
T Consensus 4 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~ 80 (138)
T 2yzi_A 4 DMKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTR 80 (138)
T ss_dssp CTTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBC
T ss_pred hhhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhC
Confidence 34567999998 5799999999999999999999999999999 8999999999999745554433 236789999999
Q ss_pred CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhc
Q 017586 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~ 270 (369)
++.++++++++.+|++.|.+++.+++ |+|++|+++|+||..||++++...+.
T Consensus 81 ~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 81 NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSC
T ss_pred CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHH
Confidence 99999999999999999999999999 99989999999999999998776553
No 32
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.80 E-value=3.7e-19 Score=139.38 Aligned_cols=121 Identities=22% Similarity=0.240 Sum_probs=107.4
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCceee
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+++++|. +++.++++++++.+|++.|.+++++.+||+++|+++|++|.+|++ +.+..+......++.++|.+++.++
T Consensus 2 ~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEE
Confidence 4678887 578999999999999999999999999999989999999999997 5554444334678999999899999
Q ss_pred cCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 223 ~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++++..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999998 999999999999986643
No 33
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=9.1e-20 Score=150.34 Aligned_cols=131 Identities=21% Similarity=0.348 Sum_probs=113.6
Q ss_pred HhcCCCccccccCC-CceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017586 138 RMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|.+. .++.++++++++.+|++.|.+++++.+||++ +|+++|+||.+|+++.+..........++.++|
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 99 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAM 99 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTS
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHh
Confidence 45667889999852 3689999999999999999999999999999 789999999999985544432233367899999
Q ss_pred ccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
.+++.++++++++.+|++.|.+++.+++||+|+ |+++|+||..||++++....
T Consensus 100 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 100 TKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp BSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 99999999999999766544
No 34
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.80 E-value=3.2e-19 Score=139.21 Aligned_cols=117 Identities=25% Similarity=0.295 Sum_probs=105.8
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCcee
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 221 (369)
+++++|. +++.++++++++.++++.|.+++++.+||++ +|+++|++|.+|++ +.+..+ ..++.++|.+++.+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~----~~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIA-KALAQN----KKTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHH-HHHHTT----CCBGGGTSBSSCCC
T ss_pred chHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHH-HHHHhc----ccCHHHHhcCCCeE
Confidence 4778888 5788999999999999999999999999999 89999999999997 444433 24899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 222 v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
+++++++.++++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 999999999999999999999999999899999999999998654
No 35
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.80 E-value=5.4e-19 Score=155.36 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=139.5
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHH--HHhhhHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERA--AEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~--~~~~~~~~~~~~~ 116 (369)
..+++|+|+++++++.+++++.+|+++|.+++++++||+| +|+++|+++..|+++.+....... ......+......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 6799999999999999999999999999999999999998 699999999999998754211000 0000001111110
Q ss_pred HHHhcCCCCCChhhHHHH-HHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCC-----------
Q 017586 117 VEKHWGTSISGPNTFIET-LRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN----------- 184 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~----------- 184 (369)
+....-............ ....+....+.+.+.+ ..++.+.. -.++...+.+.+.++++++.+.
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~-~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISE-GDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCT-TCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCC-CCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence 000000000000000000 0000011122333443 44555533 3677777889999999888521
Q ss_pred --EEEEEeehHHHHHHHHhcCCCccccccccccc-cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHH
Q 017586 185 --KPRGILTSKDILMRVISQNLPADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261 (369)
Q Consensus 185 --~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di 261 (369)
.+..+.+..|.. ....... ...+++++|+ +++.++++++++.+|++.|.+++++++||+|++|+++|+||..|+
T Consensus 162 ~~~~~~i~t~~d~~-~~~~~~~--~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl 238 (245)
T 3l2b_A 162 KNNITVITTPHDSF-TASRLIV--QSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHL 238 (245)
T ss_dssp HHTCEEEECSSCHH-HHHHHGG--GGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC--
T ss_pred HcCCeEEEeCCChH-HHHHHHh--cCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHh
Confidence 234567777764 2221111 2568999999 899999999999999999999999999999999999999999999
Q ss_pred HHH
Q 017586 262 THA 264 (369)
Q Consensus 262 ~~~ 264 (369)
+++
T Consensus 239 l~~ 241 (245)
T 3l2b_A 239 IST 241 (245)
T ss_dssp ---
T ss_pred hch
Confidence 974
No 36
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.80 E-value=8e-19 Score=140.65 Aligned_cols=121 Identities=21% Similarity=0.352 Sum_probs=107.7
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CC--EEEEEeehHHHHHHHHhcCCCccccccccccccC
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~--~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~ 218 (369)
.+++++|. +++.++++++++.+|++.|.+++++++||++ ++ +++|++|.+|++ +.+..+... ..++.++|.++
T Consensus 5 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDIL-RAVAQRLDL-DGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHH-HHHHTTCCT-TSBSGGGCBCC
T ss_pred eEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHH-HHHhcCCCC-CCCHHHHcCCC
Confidence 46899998 5799999999999999999999999999999 56 899999999997 444443322 57899999999
Q ss_pred ceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
+.+++++ ++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999999986543
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.80 E-value=5.7e-19 Score=140.90 Aligned_cols=127 Identities=27% Similarity=0.353 Sum_probs=110.4
Q ss_pred HhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH-HHHHHhcCCCcccccccccc
Q 017586 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl-l~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|. +++.++++++++.++++.|.+++++.+||++ +++++|++|.+|+ + +.+..+.. ...++.++|
T Consensus 4 ~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~~-~~~~v~~~m 79 (138)
T 2p9m_A 4 TLKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKYT-LETTIGDVM 79 (138)
T ss_dssp -CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCCC-SSCBHHHHS
T ss_pred ccccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhccc-CCcCHHHHh
Confidence 355678999998 5788999999999999999999999999999 7999999999999 7 44443322 357899999
Q ss_pred ccCceeecCCCCHHHHHHHhHhCC-----CcEeeEEcCCCcEEEEEehhHHHHHHHHH
Q 017586 216 TPNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~-----~~~l~Vvd~~g~~~Givt~~Di~~~~~~~ 268 (369)
.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||..|+++++..+
T Consensus 80 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 80 TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 989999999999999999999999 99999999899999999999999876543
No 38
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.80 E-value=9.6e-20 Score=148.76 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=107.2
Q ss_pred HhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017586 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|+++.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +.+..+ ...++.++|
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~---~~~~v~~im 109 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNP---EQFHLKSIL 109 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGSSCG---GGCCHHHHC
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHcC---CcccHHHHc
Confidence 466788999999766899999999999999999999999999999 5 5999999999997 443322 357899999
Q ss_pred ccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHH
Q 017586 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~ 262 (369)
. ++.++++++++.+|++.|.+++.+++||+|++|+++|+||+.||+
T Consensus 110 ~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 R-PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp B-CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred C-CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 6 589999999999999999999999999999999999999999986
No 39
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.80 E-value=2.3e-19 Score=146.54 Aligned_cols=129 Identities=22% Similarity=0.378 Sum_probs=112.9
Q ss_pred CCccccccCC----CceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017586 142 PSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 142 ~~v~~im~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
.+++++|.++ +++.++++++++.+|++.|.+++++.+||.++++++|++|.+|+++.+..........++.++|.+
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 86 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA 86 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC
Confidence 3588899865 567999999999999999999999999997789999999999998544444433346789999999
Q ss_pred CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcc
Q 017586 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRN 271 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~ 271 (369)
++.++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++......
T Consensus 87 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 87 KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCC
T ss_pred CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 79999999999999988766543
No 40
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.79 E-value=3.9e-19 Score=143.96 Aligned_cols=121 Identities=20% Similarity=0.231 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCc
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
..+++++|.++.++.++++++++.+|++.|.+++++.+||++ +|+++|+||.+|++ +.+..+......++.++|.+++
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEESC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCCC
Confidence 357999999544899999999999999999999999999999 88999999999997 6665544434678999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHH
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~ 263 (369)
.++++++++.+|++.|.+++.+.+||+|++ +++|+||..||++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999965 9999999999975
No 41
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.79 E-value=2.1e-18 Score=139.38 Aligned_cols=136 Identities=18% Similarity=0.336 Sum_probs=107.5
Q ss_pred EEEehhHHHHHHHhccCCCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC--CeEEEEEehHHHHHH
Q 017586 20 GILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYD 95 (369)
Q Consensus 20 Givt~~di~~~~~~~~~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~ 95 (369)
|.++..+ +..+.....+...+++++|++ +++++++++++.+|++.|.+++++++||+|+ |+++|+++..|+++.
T Consensus 4 g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 4 GLIDESE--QRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CccCHHH--HHHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 5566444 344555557788999999998 9999999999999999999999999999984 899999999998865
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCC
Q 017586 96 AIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175 (369)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~ 175 (369)
.... ...+++++|. ++.++++++++.++++.|.+++.
T Consensus 82 ~~~~----------------------------------------~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~ 118 (148)
T 3lv9_A 82 KINE----------------------------------------NKIELEEILR---DIIYISENLTIDKALERIRKEKL 118 (148)
T ss_dssp HHHH----------------------------------------SCCCGGGTCB---CCEEEETTSBHHHHHHHHHHHTC
T ss_pred HhcC----------------------------------------CCccHHHhcC---CCeEECCCCCHHHHHHHHHhcCC
Confidence 2210 1456889994 48899999999999999999999
Q ss_pred cEEEEEe-CCEEEEEeehHHHHHHHH
Q 017586 176 SSAVVTV-ENKPRGILTSKDILMRVI 200 (369)
Q Consensus 176 ~~~~V~~-~~~~~Givt~~dll~~~~ 200 (369)
+.+||++ +|+++|++|..|+++.+.
T Consensus 119 ~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 119 QLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp SEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 9999999 699999999999985554
No 42
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.79 E-value=4.2e-19 Score=143.93 Aligned_cols=127 Identities=28% Similarity=0.398 Sum_probs=108.2
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcC-------------CCcc
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------------LPAD 207 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~-------------~~~~ 207 (369)
.+++++|.++.+++++++++++.+|++.|.+++++++||++ +++++|++|.+|++ .+.... ....
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL-ALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHT-TCC----CCHHHHHHHTC-----
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHH-HhhcccCcccchHHHHHHHHHhc
Confidence 46899999655799999999999999999999999999999 68999999999996 321100 1122
Q ss_pred ccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 208 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
..++.++|.++++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC--
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcc
Confidence 46899999988999999999999999999999999999999999999999999999876543
No 43
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.78 E-value=1.6e-18 Score=141.52 Aligned_cols=130 Identities=15% Similarity=0.198 Sum_probs=111.5
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-----Cccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~-----~~~~~~v~ 212 (369)
+...+++++|.+..++.++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMM-DAILGLERIEFERLETMKVE 86 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHH-HHSBCSSSBCGGGGGTCBGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHH-HHHhcccccchHHhcCCcHH
Confidence 45677999998544789999999999999999999999999999 79999999999997 5443311 12356899
Q ss_pred cccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhcc
Q 017586 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVRN 271 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~~ 271 (369)
++|.+++.++++++++.+|++.|.+++. +||+|++|+++|+||..||++++......
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCC
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 99999999999999999999988776643
No 44
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.78 E-value=2.7e-19 Score=141.91 Aligned_cols=121 Identities=17% Similarity=0.320 Sum_probs=107.4
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCce
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
.+++++|. +++.++++++++.++++.|.+++++++||++ +++++|++|.+|++++++..+......++.++|.+++.
T Consensus 8 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 8 TTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIY 85 (133)
T ss_dssp CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCC
T ss_pred cCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCE
Confidence 46889998 5788999999999999999999999999997 89999999999997445544433335789999998999
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
++++++++.+|++.|.+++.+++||+|+ |+++|+||..||++++
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 9999999999999999999999999997 9999999999999854
No 45
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.78 E-value=1.3e-18 Score=145.23 Aligned_cols=129 Identities=22% Similarity=0.331 Sum_probs=110.1
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcC-----------------
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN----------------- 203 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~----------------- 203 (369)
.+++++|.++.+++++++++++.+|++.|.+++++++||++ +++++|+||.+|+++.....+
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 45789998544799999999999999999999999999999 799999999999962111000
Q ss_pred ---------CCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhc
Q 017586 204 ---------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 204 ---------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~ 270 (369)
......++.++|++++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++.....
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhh
Confidence 0112568999999889999999999999999999999999999999999999999999998877654
No 46
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.77 E-value=5.4e-18 Score=144.53 Aligned_cols=122 Identities=16% Similarity=0.236 Sum_probs=110.0
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHc---CCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 214 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~---~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~ 214 (369)
+...+++++|+ ++++++++++|+.+|++.|.+. +++.+||++ +++++|++|.+|++ .. ....+++++
T Consensus 51 ~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIF-KH------EPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHT-TS------CTTSBGGGG
T ss_pred CCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHH-hC------CCcchHHHH
Confidence 45668999999 5799999999999999999987 789999999 89999999999996 21 125689999
Q ss_pred cccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 215 m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
|++++.++++++++.+|++.|.+++.+.+||||++|+++|+||..|+++.+..+.
T Consensus 122 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 122 LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 9989999999999999999999999999999999999999999999999876655
No 47
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.77 E-value=2.4e-18 Score=138.14 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=105.0
Q ss_pred CCCccc---cccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCC-Ccccccccccc
Q 017586 141 RPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKVM 215 (369)
Q Consensus 141 ~~~v~~---im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~-~~~~~~v~~~m 215 (369)
..++++ +|. +++.++++++++.+|++.|.+++++.+||++ +++++|++|.+|++ +.+..+. .....++.++|
T Consensus 7 ~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 7 KIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp GSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHTC----CCSBHHHHH
T ss_pred hcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHH-HHhcccccccCCccHHHHH
Confidence 445777 776 6789999999999999999999999999999 78999999999997 4443321 22356899999
Q ss_pred cc------CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 216 TP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 216 ~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
.+ ++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 75 68999999999999999999999999999999999999999999997754
No 48
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.77 E-value=2.4e-18 Score=141.05 Aligned_cols=126 Identities=19% Similarity=0.191 Sum_probs=108.6
Q ss_pred CCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhc-------CCCccccccc
Q 017586 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ-------NLPADSTLVE 212 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~-------~~~~~~~~v~ 212 (369)
..+++++|. ++++++++++++.+|++.|.+++++.+||++ +|+++|+||.+|+++.+... .......++.
T Consensus 4 ~~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 356899998 5788999999999999999999999999999 79999999999997443321 1112357899
Q ss_pred cccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
++|.+++.++++++++.+|+..|.+++.+.+||+|+ |+++|+||..||++++...+
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997 99999999999999876544
No 49
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.77 E-value=2.1e-18 Score=141.16 Aligned_cols=129 Identities=15% Similarity=0.191 Sum_probs=111.3
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCC-----ccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP-----ADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~-----~~~~~v~ 212 (369)
+...+++++|.++.++.++++++++.+|++.|.+++++.+||++ +++++|++|.+|++ ..+..... ....++.
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIM-NSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHH-HHHBCSSSBCGGGTTTSBHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHH-HHhhhhcccchhhhccCCHH
Confidence 45577999998544799999999999999999999999999999 78999999999997 54433211 2357899
Q ss_pred cccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHhc
Q 017586 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVR 270 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~~ 270 (369)
++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+.
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~ 145 (159)
T 1yav_A 90 EVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIR 145 (159)
T ss_dssp HHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred HhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHH
Confidence 9999999999999999999999999876 9999999999999999999998877664
No 50
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.77 E-value=5.5e-18 Score=138.37 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=107.3
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcE-EEEEeCCEEEEEeehHHHHHHHHhc--------------CCCcc
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ--------------NLPAD 207 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~-~~V~~~~~~~Givt~~dll~~~~~~--------------~~~~~ 207 (369)
+++++|. +++.++++++++.+|++.|.+++++. +||+++++++|++|.+|+++..... .....
T Consensus 17 ~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (157)
T 1o50_A 17 DVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLI 94 (157)
T ss_dssp HHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCS
T ss_pred cHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHc
Confidence 4789998 57999999999999999999999999 9999944999999999998443210 01223
Q ss_pred ccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 208 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
..++.++|.+ +.++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++++...+
T Consensus 95 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 95 AKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp SCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred CCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 5789999998 999999999999999999999999999998999999999999999776543
No 51
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.76 E-value=3.4e-18 Score=143.47 Aligned_cols=124 Identities=24% Similarity=0.278 Sum_probs=109.0
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCce
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
.+++++|. ++++++++++++.+|++.|.+++++.+||++ +|+++|++|.+|++..+..........++.++|.+++.
T Consensus 9 ~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~~ 86 (184)
T 1pvm_A 9 MRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIP 86 (184)
T ss_dssp CBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSCC
T ss_pred cCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCCc
Confidence 56899998 6799999999999999999999999999998 78999999999997433322222336789999998999
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 87 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 87 KVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp EEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999988999999999999985443
No 52
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.76 E-value=9.1e-18 Score=136.30 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccc----
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT---- 216 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~---- 216 (369)
.+++++ +++.++++++++.+|++.|.+++++.+||++ +|+++|++|.+|+++............++.++|.
T Consensus 23 ~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 98 (152)
T 2uv4_A 23 LQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSH 98 (152)
T ss_dssp HTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCH
T ss_pred ccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhc
Confidence 346666 3588899999999999999999999999999 7999999999999743332221223568999996
Q ss_pred --cCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 217 --PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 217 --~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
+++.++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 78899999999999999999999999999999899999999999998653
No 53
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.76 E-value=1.2e-17 Score=138.61 Aligned_cols=141 Identities=14% Similarity=0.242 Sum_probs=102.8
Q ss_pred CcEEEEEehhHHHHHHHhccCCCCccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHH
Q 017586 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAK 91 (369)
Q Consensus 16 ~~~~Givt~~di~~~~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~d 91 (369)
+.-.|.++..+ +..+.....+...+++++|+ ++++++++++++.+|++.|.+++++++||++ + ++++|+++..|
T Consensus 19 ~~~~g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~d 96 (172)
T 3lhh_A 19 GSSAGVIEHNE--HAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQ 96 (172)
T ss_dssp --------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHHcCCCCHHH--HHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHH
Confidence 33457777555 24444555778899999999 7889999999999999999999999999998 4 89999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHH
Q 017586 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (369)
Q Consensus 92 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~ 171 (369)
+++.... -...+++++|. ++.++++++++.++++.|.
T Consensus 97 l~~~~~~----------------------------------------~~~~~v~~im~---~~~~v~~~~~l~~a~~~m~ 133 (172)
T 3lhh_A 97 LLSESIA----------------------------------------GERLELVDLVK---NCNFVPNSLSGMELLEHFR 133 (172)
T ss_dssp HHHHHHT----------------------------------------TCCCCGGGGCB---CCEEEETTCCHHHHHHHHH
T ss_pred HHHHHhh----------------------------------------cCcccHHHHhc---CCeEeCCCCCHHHHHHHHH
Confidence 8865110 01456899993 5889999999999999999
Q ss_pred HcCCcEEEEEe-CCEEEEEeehHHHHHHHHh
Q 017586 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 172 ~~~~~~~~V~~-~~~~~Givt~~dll~~~~~ 201 (369)
+++.+.+||++ +|+++|+||..|+++.+..
T Consensus 134 ~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 134 TTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 99999999999 6999999999999955543
No 54
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.75 E-value=4.8e-18 Score=145.95 Aligned_cols=161 Identities=16% Similarity=0.103 Sum_probs=103.7
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..++.++|.++++++.+++++.+|+++|.+++++++||+| +++++|+++..|+.+.
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~----------------------- 68 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL----------------------- 68 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS-----------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 4689999999999999999999999999999999999998 7999999999997642
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
....+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|+++
T Consensus 69 --------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~ 126 (213)
T 1vr9_A 69 --------------------DLDSSVFNKVS--LPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLE 126 (213)
T ss_dssp --------------------CTTSBSGGGCB--CTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred --------------------cCCCcHHHHcc--CCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 11346899998 5788999999999999999999999999999 699999999999984
Q ss_pred HHHhcCCCccccccccccccC-ceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCc
Q 017586 198 RVISQNLPADSTLVEKVMTPN-PECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (369)
Q Consensus 198 ~~~~~~~~~~~~~v~~~m~~~-~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~ 251 (369)
.+. ... ...+.+.+- +.+.....++.++.+.|.+++.+.++|++.+|.
T Consensus 127 ~~~-~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 127 ALI-EAL-----AMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp HHH-HSC-----C------------------------------------------
T ss_pred HHH-HHh-----cCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 443 222 112222211 111133445999999999999999999876554
No 55
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.75 E-value=8.5e-18 Score=132.72 Aligned_cols=122 Identities=19% Similarity=0.203 Sum_probs=100.5
Q ss_pred CCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHH
Q 017586 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~ 112 (369)
.+.+.+++++|++ +++++++++++.+|++.|.+++++++||+| + ++++|+++..|+++....
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-------------- 67 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS-------------- 67 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT--------------
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc--------------
Confidence 3557899999994 567999999999999999999999999998 4 899999999998865211
Q ss_pred HHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEee
Q 017586 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (369)
Q Consensus 113 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (369)
.....+++++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|++|
T Consensus 68 -------------------------~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt 119 (130)
T 3i8n_A 68 -------------------------GSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVT 119 (130)
T ss_dssp -------------------------TTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEE
T ss_pred -------------------------CCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEE
Confidence 012345788885 378999999999999999999999999999 799999999
Q ss_pred hHHHHHHHH
Q 017586 192 SKDILMRVI 200 (369)
Q Consensus 192 ~~dll~~~~ 200 (369)
..|+++.+.
T Consensus 120 ~~dil~~l~ 128 (130)
T 3i8n_A 120 LEDIFEHLV 128 (130)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999985543
No 56
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.74 E-value=9.8e-18 Score=140.62 Aligned_cols=131 Identities=11% Similarity=0.163 Sum_probs=110.7
Q ss_pred HhcCCCccccccCCCc--eeEE--CCCCcHHHHHHHHHHcCCcEEEEE--e-CCEEEEEeehHHHHHHHHhcC-------
Q 017586 138 RMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------- 203 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~--~~~v--~~~~~l~~~~~~~~~~~~~~~~V~--~-~~~~~Givt~~dll~~~~~~~------- 203 (369)
.+...+++++|.+..+ ++++ ++++++.+|++.|.+++++.+||+ + +|+++|+||.+|+++.+....
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 3556789999996422 7778 999999999999999999999999 6 789999999999984443210
Q ss_pred ----------------CCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 204 ----------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 204 ----------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
......++.++|.+++.++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01235689999998999999999999999999999999999999 8999999999999998776
Q ss_pred Hh
Q 017586 268 TV 269 (369)
Q Consensus 268 ~~ 269 (369)
..
T Consensus 166 ~~ 167 (185)
T 2j9l_A 166 MA 167 (185)
T ss_dssp HC
T ss_pred hh
Confidence 55
No 57
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=3.9e-17 Score=134.48 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=109.2
Q ss_pred CCCcccccccccc---CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHH
Q 017586 37 NLEETPVSKVMTR---NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (369)
Q Consensus 37 ~~~~~~v~dim~~---~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~ 112 (369)
.+..++++++|.+ +++++.+++++.+|++.|.+++++.+||+| +|+++|+|+..|+++......
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------ 87 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG------------ 87 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG------------
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC------------
Confidence 5667899999985 699999999999999999999999999999 689999999999987633210
Q ss_pred HHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeh
Q 017586 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTS 192 (369)
Q Consensus 113 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~ 192 (369)
......+++++|. +++.++++++++.++++.|.+++++++||+++|+++|+||.
T Consensus 88 ------------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~ 141 (165)
T 3fhm_A 88 ------------------------AASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISI 141 (165)
T ss_dssp ------------------------GGGGTSBGGGTSB--SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred ------------------------CccccCCHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEH
Confidence 0123456899998 57899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 017586 193 KDILMRVISQ 202 (369)
Q Consensus 193 ~dll~~~~~~ 202 (369)
.|++ +.+..
T Consensus 142 ~dil-~~~~~ 150 (165)
T 3fhm_A 142 GDVV-KARIG 150 (165)
T ss_dssp HHHH-HHTTC
T ss_pred HHHH-HHHHH
Confidence 9998 44433
No 58
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=6.2e-17 Score=126.59 Aligned_cols=119 Identities=19% Similarity=0.242 Sum_probs=102.8
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 017586 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
++++++|.+++.++++++++.+|++.|.+++++.+||+|+|+++|+++..|+++.....
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~--------------------- 59 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG--------------------- 59 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT---------------------
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC---------------------
Confidence 36889999999999999999999999999999999999999999999999987542110
Q ss_pred cCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHH
Q 017586 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~ 198 (369)
......+++++|. +++.++++++++.++++.|.+++.+.+||+++|+++|++|.+|+++.
T Consensus 60 ----------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~ 119 (125)
T 1pbj_A 60 ----------------DDLAEVKVWEVME--RDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRA 119 (125)
T ss_dssp ----------------CCTTTSBHHHHCB--CGGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ----------------CcccccCHHHHcC--CCCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHH
Confidence 0012346788887 57899999999999999999999999999999999999999999843
No 59
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.72 E-value=2.9e-17 Score=133.87 Aligned_cols=123 Identities=20% Similarity=0.217 Sum_probs=102.6
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|++ +++++.+++|+.+|+++|.+++++++||+| +++++|+++.+|+++......
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~---------------- 77 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHD---------------- 77 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHT----------------
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcc----------------
Confidence 3578999984 789999999999999999999999999998 699999999999987633210
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (369)
.........+++++|. +++.++++++++.+|++.|.+++ .+||++ +|+++|+||.+|+
T Consensus 78 -----------------~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Di 136 (156)
T 3k6e_A 78 -----------------LSQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp -----------------CCHHHHTTSBGGGTCB--CSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHH
T ss_pred -----------------cccccccccCHHHhhc--CCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHH
Confidence 0012345567999998 68999999999999999998765 499998 8999999999999
Q ss_pred HHHH
Q 017586 196 LMRV 199 (369)
Q Consensus 196 l~~~ 199 (369)
++.+
T Consensus 137 l~~~ 140 (156)
T 3k6e_A 137 LKAV 140 (156)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9544
No 60
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.7e-17 Score=130.64 Aligned_cols=121 Identities=11% Similarity=0.178 Sum_probs=104.9
Q ss_pred CccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 39 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
.+.+++++|.+++.++++++++.+|++.|.+++++++||+|+|+++|+++..|+++....
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~-------------------- 62 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG-------------------- 62 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSS--------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhh--------------------
Confidence 467999999999999999999999999999999999999999999999999998753100
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
+ .....+++++|. +++.++++++++.++++.|.+++.+++||+| +|+++|++|..|++
T Consensus 63 ---~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll- 121 (128)
T 3gby_A 63 ---W---------------PTVKEKLGEELL--ETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRIL- 121 (128)
T ss_dssp ---S---------------CCTTCBCCGGGC--BCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHH-
T ss_pred ---C---------------CcccCcHHHHcc--CCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHH-
Confidence 0 001245889998 5788999999999999999999999999998 89999999999998
Q ss_pred HHH
Q 017586 198 RVI 200 (369)
Q Consensus 198 ~~~ 200 (369)
+.+
T Consensus 122 ~~l 124 (128)
T 3gby_A 122 GFL 124 (128)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 61
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.72 E-value=6.8e-18 Score=132.72 Aligned_cols=117 Identities=17% Similarity=0.186 Sum_probs=100.1
Q ss_pred ccccccccccC--CeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 40 ETPVSKVMTRN--PTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~~~--~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+++++|+++ ++++++++++.+|++.|.+++++++||++ + |+++|+++..|+++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 56899999954 99999999999999999999999999998 4 799999999998754110
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHH
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (369)
.....+++++|.+ +.++++++++.++++.|.+++.+.+||++ +|+++|++|..|
T Consensus 65 ----------------------~~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 65 ----------------------DAEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ----------------------TCCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ----------------------cCCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 0123457888863 77899999999999999999999999999 899999999999
Q ss_pred HHHH
Q 017586 195 ILMR 198 (369)
Q Consensus 195 ll~~ 198 (369)
+++.
T Consensus 120 ll~~ 123 (127)
T 3nqr_A 120 ILEL 123 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9844
No 62
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.72 E-value=5.4e-17 Score=126.43 Aligned_cols=116 Identities=22% Similarity=0.357 Sum_probs=102.9
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 017586 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
++++++|.+++.++++++++.+|++.|.+++++++||+| +|+++|+++..|+++....
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------------- 59 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------------------- 59 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT---------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh---------------------
Confidence 478999999999999999999999999999999999999 7999999999998765211
Q ss_pred hcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHH
Q 017586 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~ 198 (369)
...+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|.+|++ +
T Consensus 60 --------------------~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~-~ 116 (122)
T 3kpb_A 60 --------------------NKKTIEEIMT--RNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDIS-R 116 (122)
T ss_dssp --------------------TCCBGGGTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-H
T ss_pred --------------------cccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHH-H
Confidence 1236889998 5788999999999999999999999999999 69999999999998 4
Q ss_pred HH
Q 017586 199 VI 200 (369)
Q Consensus 199 ~~ 200 (369)
.+
T Consensus 117 ~l 118 (122)
T 3kpb_A 117 LF 118 (122)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 63
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.72 E-value=4.5e-17 Score=133.72 Aligned_cols=127 Identities=10% Similarity=0.155 Sum_probs=107.9
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeehHHHHHHHHhcCCC----cccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP----ADSTLV 211 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dll~~~~~~~~~----~~~~~v 211 (369)
....+++++|. +++.++++++++.+|++.|.+++++++||++ +++++|++|.+|++ +.+..+.. ....++
T Consensus 10 ~~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~v 86 (164)
T 2pfi_A 10 SHHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLV-QALQAEPPSRAPGHQQCL 86 (164)
T ss_dssp CCSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHC-------CCCCBH
T ss_pred ccCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHH-HHHHhhccccCCcccchh
Confidence 34567899998 5788999999999999999999999999998 48999999999997 44433211 123578
Q ss_pred ccccccC------ceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 212 EKVMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 212 ~~~m~~~------~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
.++|.++ +.++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++....
T Consensus 87 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 87 QDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp HHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred hhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 8999766 78999999999999999999999999999 799999999999999877655
No 64
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.72 E-value=2.9e-17 Score=129.43 Aligned_cols=118 Identities=16% Similarity=0.237 Sum_probs=101.5
Q ss_pred Cccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+.+++++|+ ++++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 4678999999 67899999999999999999999999999984 89999999999875310
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehH
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (369)
-...+++++|.+ +.++++++++.++++.|.+++.+.+||++ +|+++|++|..
T Consensus 66 ------------------------~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 66 ------------------------EPALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp ------------------------CTTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred ------------------------cCCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 013458889863 88999999999999999999999999999 69999999999
Q ss_pred HHHHHHH
Q 017586 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 119 Dil~~l~ 125 (129)
T 3jtf_A 119 DVLEQIV 125 (129)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9985554
No 65
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.72 E-value=9.7e-17 Score=127.02 Aligned_cols=122 Identities=15% Similarity=0.186 Sum_probs=105.6
Q ss_pred CccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 39 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
.+.+++++|.+++.++++++++.+|++.|.+++++++||+|+|+++|+++..|+++.....
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG------------------- 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT-------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC-------------------
Confidence 4679999999999999999999999999999999999999999999999999987642100
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
.....+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|..|+++
T Consensus 63 -------------------~~~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 63 -------------------KSLETKAEEFMT--ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp -------------------CCTTCBGGGTSE--ECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred -------------------CCcccCHHHHcC--CCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 012356889997 4688999999999999999999999999999 899999999999984
Q ss_pred HHH
Q 017586 198 RVI 200 (369)
Q Consensus 198 ~~~ 200 (369)
.+.
T Consensus 122 ~~~ 124 (133)
T 2ef7_A 122 AID 124 (133)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 66
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.71 E-value=1e-16 Score=132.96 Aligned_cols=138 Identities=16% Similarity=0.197 Sum_probs=111.0
Q ss_pred EEEEEehhHHHHHHHhccCCCCccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHH
Q 017586 18 LCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCL 93 (369)
Q Consensus 18 ~~Givt~~di~~~~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil 93 (369)
--|.++..+- ..+.....+...+|+++|+ ++++++++++++.+|++.|.+++++++||++ + ++++|+|+.+|++
T Consensus 15 ~~g~l~~~e~--~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~ 92 (173)
T 3ocm_A 15 AVPAFGVEER--NMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV 92 (173)
T ss_dssp ---CCCHHHH--HHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred hcCCcCHHHH--HHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH
Confidence 4488886552 3444444677889999997 4688999999999999999999999999997 4 7999999999998
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHc
Q 017586 94 YDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL 173 (369)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~ 173 (369)
...... ...+++ +| +++.++++++++.++++.|.++
T Consensus 93 ~~~~~~----------------------------------------~~~~v~-~~---~~~~~v~~~~~l~~al~~m~~~ 128 (173)
T 3ocm_A 93 ADLITE----------------------------------------GRVRRN-RL---RDPIIVHESIGILRLMDTLKRS 128 (173)
T ss_dssp HHHHHH----------------------------------------SSCCGG-GS---BCCCEECGGGCHHHHHHHHHHS
T ss_pred HHHhcC----------------------------------------CcchhH-hc---CCCeEECCCCcHHHHHHHHHHc
Confidence 752210 123466 44 4588999999999999999999
Q ss_pred CCcEEEEEe-CCEEEEEeehHHHHHHHHh
Q 017586 174 RLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 174 ~~~~~~V~~-~~~~~Givt~~dll~~~~~ 201 (369)
+.+.+||++ +|+++|+||..|++..+..
T Consensus 129 ~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 129 RGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp TTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred CCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 999999998 7999999999999955543
No 67
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.71 E-value=5.6e-17 Score=131.76 Aligned_cols=121 Identities=21% Similarity=0.289 Sum_probs=105.2
Q ss_pred CCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEe-e--CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHH
Q 017586 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVV-E--NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVv-d--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~ 111 (369)
.+...+++++|++ +++++++++++.+|++.|.+++++++||+ + +++++|+++..|+++.....
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~------------ 83 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID------------ 83 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH------------
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC------------
Confidence 4557899999996 89999999999999999999999999999 5 38999999999998752211
Q ss_pred HHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEe
Q 017586 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Giv 190 (369)
...+++++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|+|
T Consensus 84 ----------------------------~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGiv 132 (153)
T 3oco_A 84 ----------------------------DKAKISTIMR---DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGII 132 (153)
T ss_dssp ----------------------------TTSBGGGTCB---CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEE
T ss_pred ----------------------------CCCcHHHHhC---CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEe
Confidence 1346889993 588999999999999999999999999999 79999999
Q ss_pred ehHHHHHHHH
Q 017586 191 TSKDILMRVI 200 (369)
Q Consensus 191 t~~dll~~~~ 200 (369)
|..|+++.+.
T Consensus 133 t~~dil~~l~ 142 (153)
T 3oco_A 133 TDKDVYEELF 142 (153)
T ss_dssp CHHHHHHHHH
T ss_pred eHHHHHHHHh
Confidence 9999985544
No 68
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.71 E-value=3.3e-17 Score=133.72 Aligned_cols=137 Identities=17% Similarity=0.238 Sum_probs=106.2
Q ss_pred cccccccc------cCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 41 TPVSKVMT------RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 41 ~~v~dim~------~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+++|+|. ++++++++++++.+|++.|.+++++++||.++++++|+++..|+++.....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~--------------- 71 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQ--------------- 71 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGG---------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhc---------------
Confidence 57999998 456999999999999999999999999997789999999999998652210
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHH
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~d 194 (369)
+ ......+++++|. +++.++++++++.++++.|.+++++++||+++|+++|++|..|
T Consensus 72 -------~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~d 128 (157)
T 4fry_A 72 -------E--------------RSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGD 128 (157)
T ss_dssp -------T--------------CCSSSCBHHHHSB--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHH
T ss_pred -------c--------------CCccccCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHH
Confidence 0 0013456888888 5788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccccccc
Q 017586 195 ILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 195 ll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+++.+.. ........+.+++.
T Consensus 129 il~~l~~-~~~~~~~~~~~~i~ 149 (157)
T 4fry_A 129 LVKSVIA-DQQFTISQLEHYIH 149 (157)
T ss_dssp HHHHHHT-TCCCCCC-------
T ss_pred HHHHHHH-HHHhhHHHHHhhcc
Confidence 9854443 33322344555554
No 69
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=1.6e-16 Score=130.05 Aligned_cols=128 Identities=20% Similarity=0.307 Sum_probs=105.8
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
.++++++|.++++++.+++++.+|++.|.+++++++||+| +|+++|+|+..|+++.....+...
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~--------------- 68 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRS--------------- 68 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC-----------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhccc---------------
Confidence 5689999999999999999999999999999999999998 699999999999987643211000
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~ 198 (369)
..........+++++|. +++.++++++++.++++.|.+.+.+.+||+++|+++|+||..|+++.
T Consensus 69 --------------~~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~ 132 (160)
T 2o16_A 69 --------------AQGDSLAFETPLFEVMH--TDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTI 132 (160)
T ss_dssp ---------------------CCCBHHHHSC--SCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHH
T ss_pred --------------ccccchhcccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 00011233556889998 57999999999999999999999999999999999999999999843
No 70
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.71 E-value=8.6e-17 Score=126.92 Aligned_cols=120 Identities=9% Similarity=0.126 Sum_probs=98.9
Q ss_pred ccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 41 ~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
.+++++|++ +++++++++++.+|++.|.+++++++||++ +++++|+++..|+++.....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----------------- 64 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----------------- 64 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS-----------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc-----------------
Confidence 579999974 689999999999999999999999999996 38999999999998752110
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (369)
.. ....+++++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|++|.+|+
T Consensus 65 ------~~--------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 65 ------KE--------------FTKEIMLRAAD---EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp ------SC--------------CCHHHHHHHSB---CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHH
T ss_pred ------Cc--------------cchhhHHHhcc---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHH
Confidence 00 00112556663 478999999999999999999999999998 7999999999999
Q ss_pred HHHHH
Q 017586 196 LMRVI 200 (369)
Q Consensus 196 l~~~~ 200 (369)
++.+.
T Consensus 122 l~~l~ 126 (130)
T 3hf7_A 122 LEEIV 126 (130)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 85544
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=1.4e-16 Score=136.76 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=106.0
Q ss_pred CCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCce
Q 017586 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
.+++++|. ++++++++++++.+|++.|.+++++.+||++ +++++|++|.+|+. +.. ...++.++|.+++.
T Consensus 13 ~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~-~~~------~~~~v~~im~~~~~ 83 (213)
T 1vr9_A 13 MKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLL-DLD------LDSSVFNKVSLPDF 83 (213)
T ss_dssp CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGT-TSC------TTSBSGGGCBCTTC
T ss_pred cCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHH-hhc------CCCcHHHHccCCCE
Confidence 45788888 6899999999999999999999999999999 89999999999996 322 14689999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
++++++++.+|++.|.+++++++||+|++|+++|+||..|+++++..
T Consensus 84 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 84 FVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp CEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999987654
No 72
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=2.1e-16 Score=129.26 Aligned_cols=125 Identities=15% Similarity=0.248 Sum_probs=106.1
Q ss_pred CCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+..++++++|++ ++++.+++++.+|++.|.+++++++||+| +|+++|+++..|+++.....
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 75 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ----------------- 75 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-----------------
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-----------------
Confidence 456799999987 56999999999999999999999999999 79999999999988752100
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CC---EEEEEeeh
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN---KPRGILTS 192 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~---~~~Givt~ 192 (369)
......+++++|.+..++.++++++++.++++.|.+++++++||++ +| +++|+||.
T Consensus 76 --------------------~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~ 135 (159)
T 3fv6_A 76 --------------------QELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTK 135 (159)
T ss_dssp --------------------SCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEH
T ss_pred --------------------CcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEH
Confidence 0123456899998544789999999999999999999999999999 66 99999999
Q ss_pred HHHHHHHH
Q 017586 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
.|+++.+.
T Consensus 136 ~dil~~l~ 143 (159)
T 3fv6_A 136 TNMTKILV 143 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984443
No 73
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.70 E-value=1.5e-16 Score=126.25 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=103.7
Q ss_pred ccccccc---cCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 42 PVSKVMT---RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~---~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
+++++|+ ++++++++++++.+|++.|.+++++++||+|+|+++|+++..|+++.....
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 67 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLL------------------- 67 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGS-------------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHc-------------------
Confidence 8999999 899999999999999999999999999999999999999999987531100
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~ 198 (369)
+ ......+++++|. +++.++++++++.++++.|.+++.+.+||+++|+++|++|..|+++.
T Consensus 68 ---~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 68 ---D--------------KPVKDTQVKEIMT--RQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKD 128 (135)
T ss_dssp ---S--------------SCGGGSBGGGTSB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ---C--------------CCcccCCHHHhcc--CCCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHH
Confidence 0 0022456899998 57899999999999999999999999999998999999999999844
Q ss_pred H
Q 017586 199 V 199 (369)
Q Consensus 199 ~ 199 (369)
+
T Consensus 129 ~ 129 (135)
T 2rc3_A 129 A 129 (135)
T ss_dssp H
T ss_pred H
Confidence 3
No 74
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=1.9e-17 Score=131.80 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=100.6
Q ss_pred ccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 40 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+++++|+ ++++++++++++.+|++.|.+++++++||++ + ++++|+++..|+++....
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----------------- 64 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----------------
Confidence 568999999 6789999999999999999999999999998 4 799999999998764110
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHH
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (369)
......+++++|.+ +.++++++++.++++.|.+++.+.+||++ +|+++|++|.+|
T Consensus 65 ---------------------~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 65 ---------------------ADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ---------------------SSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 00123468899963 88999999999999999999999999998 799999999999
Q ss_pred HHH
Q 017586 195 ILM 197 (369)
Q Consensus 195 ll~ 197 (369)
+++
T Consensus 121 il~ 123 (136)
T 3lfr_A 121 VLE 123 (136)
T ss_dssp HHT
T ss_pred HHH
Confidence 983
No 75
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.70 E-value=1.3e-16 Score=142.71 Aligned_cols=122 Identities=21% Similarity=0.287 Sum_probs=107.3
Q ss_pred hcCCCccccccCCCceeEECCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccc
Q 017586 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~ 212 (369)
....+++++|+ ++++++++++++.++++.|.++ +++++||++ +++++|+||.+|++ .. ....++.
T Consensus 132 ~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~ 202 (278)
T 2yvy_A 132 YEEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVA 202 (278)
T ss_dssp SCTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHH-HS------CTTCBST
T ss_pred CCcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHh-cC------CCCCcHH
Confidence 45667999998 5799999999999999999987 789999999 79999999999997 32 1257899
Q ss_pred cccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+.+..
T Consensus 203 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 203 EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp TTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred HHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 999989999999999999999999999999999999999999999999998766544
No 76
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=1.8e-16 Score=129.34 Aligned_cols=141 Identities=17% Similarity=0.223 Sum_probs=109.0
Q ss_pred ccCCCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcE-eeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHH
Q 017586 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH-LPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (369)
Q Consensus 34 ~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~-lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~ 112 (369)
++......+++++|+++++++++++++.+|++.|.+++++. +||+|+++++|+++..|+++.....+
T Consensus 9 ~~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~------------ 76 (157)
T 1o50_A 9 HHHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF------------ 76 (157)
T ss_dssp -CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHH------------
T ss_pred hhhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhH------------
Confidence 34466778999999999999999999999999999999999 99999559999999999987633211
Q ss_pred HHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEee
Q 017586 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (369)
Q Consensus 113 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (369)
. .. ......+ ..........+++++|. + +.++++++++.++++.|.+++++++||++ +|+++|+||
T Consensus 77 --~---~~----~~~~~~~-~~~~~~~~~~~v~~im~--~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit 143 (157)
T 1o50_A 77 --F---GF----IPKEELI-RSSMKRLIAKNASEIML--D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLN 143 (157)
T ss_dssp --H---CC----CC--------CCCCCSSCBHHHHCB--C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEE
T ss_pred --H---hh----hccHHHH-HHHHHHHcCCcHHHHcC--C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEE
Confidence 0 00 0000000 00000123456889998 4 88999999999999999999999999999 899999999
Q ss_pred hHHHHHHH
Q 017586 192 SKDILMRV 199 (369)
Q Consensus 192 ~~dll~~~ 199 (369)
..|+++.+
T Consensus 144 ~~dll~~l 151 (157)
T 1o50_A 144 SLEILLAL 151 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998444
No 77
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.69 E-value=1.4e-16 Score=142.86 Aligned_cols=121 Identities=21% Similarity=0.287 Sum_probs=109.0
Q ss_pred cCCCccccccCCCceeEECCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccc
Q 017586 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~ 213 (369)
...+++++|+ ++++++++++++.+|++.|.++ +++++||++ +++++|+||.+|++ .. ....++.+
T Consensus 135 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll-~~------~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLI-VN------DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHT-TS------CTTSBHHH
T ss_pred ChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHH-cC------CCCCcHHH
Confidence 4567899998 5799999999999999999987 788899999 89999999999997 21 12578999
Q ss_pred ccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 214 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
+|.+++.++++++++.+|++.|.+++.+.+||||++|+++|+||..|+++.+....
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999776554
No 78
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.69 E-value=1.8e-16 Score=135.04 Aligned_cols=121 Identities=11% Similarity=0.042 Sum_probs=106.5
Q ss_pred ccCCCCccccccccccCCeEEeCCCcHHHHHHHHHhC---CCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhH
Q 017586 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG---KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (369)
Q Consensus 34 ~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~---~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~ 109 (369)
....+.+.+++++|+++++++++++++.+|++.|.++ +++.+||+| +++++|+++.+|++..
T Consensus 47 ~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~-------------- 112 (205)
T 3kxr_A 47 LYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH-------------- 112 (205)
T ss_dssp HHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS--------------
T ss_pred HHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC--------------
Confidence 3335667899999999999999999999999999997 899999998 6999999999997642
Q ss_pred HHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEE
Q 017586 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (369)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~G 188 (369)
....+++++|. +++.++++++++.++++.|.+++++.+||+| +|+++|
T Consensus 113 -----------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvG 161 (205)
T 3kxr_A 113 -----------------------------EPHEPLISLLS--EDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIG 161 (205)
T ss_dssp -----------------------------CTTSBGGGGCC--SSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEE
T ss_pred -----------------------------CCcchHHHHhc--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEE
Confidence 12346899998 5789999999999999999999999999999 799999
Q ss_pred EeehHHHHHHH
Q 017586 189 ILTSKDILMRV 199 (369)
Q Consensus 189 ivt~~dll~~~ 199 (369)
+||..|++..+
T Consensus 162 iIT~~Dil~~i 172 (205)
T 3kxr_A 162 RVTLRAATALV 172 (205)
T ss_dssp EEEHHHHHHHH
T ss_pred EEEHHHHHHHH
Confidence 99999998444
No 79
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=1.3e-17 Score=135.99 Aligned_cols=119 Identities=18% Similarity=0.227 Sum_probs=102.4
Q ss_pred cCCCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHHhhhHH
Q 017586 35 ELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAI 110 (369)
Q Consensus 35 ~~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~ 110 (369)
...+...+++++|++ +++++++++++.+|++.|.+++++++||++ + ++++|+++..|+++....
T Consensus 32 ~~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~------------ 99 (156)
T 3oi8_A 32 VLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN------------ 99 (156)
T ss_dssp HHHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC------------
T ss_pred HhccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc------------
Confidence 335678899999996 789999999999999999999999999998 4 599999999998754100
Q ss_pred HHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEE
Q 017586 111 AAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (369)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Gi 189 (369)
. ...+++++|.+ +.++++++++.++++.|.+++.+.+||+| +|+++|+
T Consensus 100 ---------------------------~-~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Gi 148 (156)
T 3oi8_A 100 ---------------------------P-EQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGL 148 (156)
T ss_dssp ---------------------------G-GGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEE
T ss_pred ---------------------------C-CcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEE
Confidence 0 23457888863 88999999999999999999999999999 7999999
Q ss_pred eehHHHH
Q 017586 190 LTSKDIL 196 (369)
Q Consensus 190 vt~~dll 196 (369)
+|..|++
T Consensus 149 vt~~Dil 155 (156)
T 3oi8_A 149 VTFEDII 155 (156)
T ss_dssp EEHHHHC
T ss_pred EEHHHhc
Confidence 9999985
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.68 E-value=3.7e-16 Score=124.44 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=106.6
Q ss_pred CCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
.+...+++++|.++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+++..+..
T Consensus 3 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------- 66 (138)
T 2yzi_A 3 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP---------------- 66 (138)
T ss_dssp CCTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT----------------
T ss_pred chhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc----------------
Confidence 4567899999999999999999999999999999999999998 79999999999987431100
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHH
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (369)
+ .....+++++|. +++.++++++++.++++.|.+++.+++ |++ +|+++|++|..|
T Consensus 67 ------~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~d 122 (138)
T 2yzi_A 67 ------G---------------LPYDIPVERIMT--RNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSD 122 (138)
T ss_dssp ------C---------------CCTTSBGGGTCB--CSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHH
T ss_pred ------C---------------CcccCCHHHHhh--CCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHH
Confidence 0 012356889998 578999999999999999999999999 999 899999999999
Q ss_pred HHHHHHhc
Q 017586 195 ILMRVISQ 202 (369)
Q Consensus 195 ll~~~~~~ 202 (369)
++ +.+..
T Consensus 123 il-~~~~~ 129 (138)
T 2yzi_A 123 LL-EASRR 129 (138)
T ss_dssp HH-HHHHC
T ss_pred HH-HHHHH
Confidence 98 44433
No 81
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.68 E-value=3.6e-16 Score=126.37 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=102.0
Q ss_pred ccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 017586 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (369)
Q Consensus 41 ~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~ 117 (369)
++++++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|+|+..|+++....
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~------------------- 88 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT------------------- 88 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS-------------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc-------------------
Confidence 589999998 999999999999999999999999999999 7999999999998864110
Q ss_pred HHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHH
Q 017586 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 118 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll 196 (369)
+. .....+++++|. +++.++++++++.++++.|.+++++.+||+++++++|+||..|++
T Consensus 89 ----~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 89 ----GV--------------DMRDASIADVMT--RGGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp ----SS--------------CCTTCBHHHHSE--ESCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ----CC--------------CcccCcHHHHcC--CCCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 00 012456788887 568899999999999999999999999999966999999999996
No 82
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.68 E-value=7.8e-16 Score=123.11 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=101.3
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC-C--eEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-G--EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~-~--~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|.+++.++++++++.+|++.|.+++++++||+|+ + +++|+++..|+++.....
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~----------------- 66 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR----------------- 66 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----------------
Confidence 46899999999999999999999999999999999999994 6 999999999987652110
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (369)
.....+++++|. +++.+++++ ++.++++.|.+++.+.+||++ +|+++|++|..|+
T Consensus 67 ---------------------~~~~~~v~~~m~--~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 67 ---------------------LDLDGPAMPIAN--SPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp ---------------------CCTTSBSGGGCB--CCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred ---------------------CCCCCCHHHHcC--CCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHH
Confidence 012356889998 578999999 999999999999999999999 8999999999999
Q ss_pred H
Q 017586 196 L 196 (369)
Q Consensus 196 l 196 (369)
+
T Consensus 123 l 123 (141)
T 2rih_A 123 C 123 (141)
T ss_dssp H
T ss_pred H
Confidence 7
No 83
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=4.9e-16 Score=127.51 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=103.3
Q ss_pred CCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHH
Q 017586 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.....+++++|+++++++++++++.+|++.|.+++++++||+| +++++|+++..|+++........
T Consensus 9 ~~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~----------- 77 (164)
T 2pfi_A 9 GSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPS----------- 77 (164)
T ss_dssp -CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------------
T ss_pred cccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccc-----------
Confidence 4557899999999999999999999999999999999999998 48999999999988653211000
Q ss_pred HHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCC----CceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEE
Q 017586 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Gi 189 (369)
.......++.++|.+. ..+.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 78 ----------------------~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Gi 135 (164)
T 2pfi_A 78 ----------------------RAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGC 135 (164)
T ss_dssp -------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEE
T ss_pred ----------------------cCCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEE
Confidence 0001123355555521 11688999999999999999999999999999999999
Q ss_pred eehHHHHHHHH
Q 017586 190 LTSKDILMRVI 200 (369)
Q Consensus 190 vt~~dll~~~~ 200 (369)
||..|+++.+.
T Consensus 136 it~~dil~~~~ 146 (164)
T 2pfi_A 136 VSWVEMKKAIS 146 (164)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999984443
No 84
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.67 E-value=3.5e-16 Score=126.50 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=104.3
Q ss_pred CCccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+++++|+ ++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|+++.....
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~--------------- 76 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGL--------------- 76 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCS---------------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhh---------------
Confidence 44679999999 4699999999999999999999999999998 79999999999998752100
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehH
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (369)
.. .. .......+++++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||..
T Consensus 77 --------~~-~~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 77 --------ER-IE--------FERLEEMKVEQVMK--QDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp --------SS-BC--------GGGGGGCBGGGTCB--SSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHH
T ss_pred --------cc-cc--------hhHHhcCCHHHHhc--CCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHH
Confidence 00 00 01123456899998 578999999999999999999886 99999 89999999999
Q ss_pred HHHHHHH
Q 017586 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 136 dil~~l~ 142 (150)
T 3lqn_A 136 AILKLLN 142 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9984443
No 85
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.67 E-value=6.2e-16 Score=123.08 Aligned_cols=121 Identities=26% Similarity=0.352 Sum_probs=103.4
Q ss_pred CCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHH-HHHHHHHHHHHHHhhhHHHHHHH
Q 017586 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKC-LYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~di-l~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+.+++++|++++.++.+++++.+|++.|.+++++++||+| +++++|+++..++ ++....
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----------------- 67 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----------------
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----------------
Confidence 457899999999999999999999999999999999999998 6999999999998 653110
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcC-----CcEEEEEe-CCEEEEE
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR-----LSSAVVTV-ENKPRGI 189 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~-----~~~~~V~~-~~~~~Gi 189 (369)
......+++++|. +++.++++++++.++++.|.+++ .+.+||++ +|+++|+
T Consensus 68 ---------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 124 (138)
T 2p9m_A 68 ---------------------KYTLETTIGDVMT--KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGI 124 (138)
T ss_dssp ---------------------CCCSSCBHHHHSC--SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEE
T ss_pred ---------------------cccCCcCHHHHhC--CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEE
Confidence 0112345788887 56889999999999999999999 99999999 8999999
Q ss_pred eehHHHHHH
Q 017586 190 LTSKDILMR 198 (369)
Q Consensus 190 vt~~dll~~ 198 (369)
+|..|+++.
T Consensus 125 it~~dll~~ 133 (138)
T 2p9m_A 125 ISDGDIIRT 133 (138)
T ss_dssp EEHHHHHHH
T ss_pred EEHHHHHHH
Confidence 999999843
No 86
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.67 E-value=4e-16 Score=126.23 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=104.3
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|++ +++++++++++.+|++.|.+++++++||+| +++++|+++..|++.......
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~---------------- 67 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDS---------------- 67 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC--------------------
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccC----------------
Confidence 5789999998 899999999999999999999999999998 589999999999875311000
Q ss_pred HHHhcCCCCCChhhHHH---HHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeh
Q 017586 117 VEKHWGTSISGPNTFIE---TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~---~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (369)
...... .........+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|+||.
T Consensus 68 -----------~~~~~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 68 -----------TWKTFNAVQKLLSKTNGKLVGDLMT--PAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp -----------CCHHHHHHHTC-----CCBHHHHSE--ESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEH
T ss_pred -----------cccchHHHHHHHHHhccccHHHhcC--CCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEH
Confidence 000000 0111223456889998 4678899999999999999999999999999 8999999999
Q ss_pred HHHHHHHH
Q 017586 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
+|+++.+.
T Consensus 135 ~dil~~~~ 142 (152)
T 4gqw_A 135 GNVVRAAL 142 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984443
No 87
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.66 E-value=2.8e-15 Score=131.02 Aligned_cols=161 Identities=17% Similarity=0.151 Sum_probs=110.3
Q ss_pred CCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC---CeEEEEEehHHHHHHHHHHHHHHHHh-------
Q 017586 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN---GEVIALLDIAKCLYDAIARMERAAEK------- 106 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~---~~~vGiv~~~dil~~~~~~~~~~~~~------- 106 (369)
....++|+|+|+++++++.+++++.+|.++|.+++++++||+|+ ++++|+|+..|+++............
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 45578999999999999999999999999999999999999984 58999999999998654332111000
Q ss_pred ----------------hhHHHHHHHHHH----HhcC------------------------------------------CC
Q 017586 107 ----------------GKAIAAAVEGVE----KHWG------------------------------------------TS 124 (369)
Q Consensus 107 ----------------~~~~~~~~~~~~----~~~g------------------------------------------~~ 124 (369)
............ .+.| ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 000000000000 0000 00
Q ss_pred C-CChhhHHHHHHHHhcCCCc--c-ccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHH
Q 017586 125 I-SGPNTFIETLRERMFRPSL--S-TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200 (369)
Q Consensus 125 ~-~~~~~~~~~~~~~~~~~~v--~-~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~ 200 (369)
. ....+ ...+.+.....++ + .+|. ..++++.+++++.++..+|...|.+++||++.|+++||||.+|++ +++
T Consensus 169 ~~i~~~~-~~~~~~~~l~~~Vdl~~~~md--~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~-kai 244 (250)
T 2d4z_A 169 EMLTLEE-IYRWEQREKNVVVNFETCRID--QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQ-AAI 244 (250)
T ss_dssp SCCBHHH-HHHHHHHHTTCBCCTTSSCEE--CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred cccChhh-hhhHHHHhcCceecccccccc--CCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHH-HHH
Confidence 0 00001 1112222233445 3 3687 679999999999999999999999999999999999999999998 555
Q ss_pred h
Q 017586 201 S 201 (369)
Q Consensus 201 ~ 201 (369)
.
T Consensus 245 ~ 245 (250)
T 2d4z_A 245 E 245 (250)
T ss_dssp H
T ss_pred H
Confidence 4
No 88
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=8.5e-16 Score=123.14 Aligned_cols=127 Identities=18% Similarity=0.272 Sum_probs=102.0
Q ss_pred CCcccccc---ccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHH
Q 017586 38 LEETPVSK---VMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 38 ~~~~~v~d---im~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
+.+.++++ +|.++++++.+++++.+|++.|.+++++++||+| +++++|+++..|+++......
T Consensus 5 ~~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------- 71 (144)
T 2nyc_A 5 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI------------- 71 (144)
T ss_dssp GGGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------
T ss_pred hhhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc-------------
Confidence 34567888 8889999999999999999999999999999998 789999999999876522100
Q ss_pred HHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCC----CceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEE
Q 017586 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~G 188 (369)
......+++++|.+. .++.++++++++.++++.|.+++.+.+||++ +|+++|
T Consensus 72 -----------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~G 128 (144)
T 2nyc_A 72 -----------------------YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVG 128 (144)
T ss_dssp --------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred -----------------------cccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEE
Confidence 001234566777632 1588999999999999999999999999999 799999
Q ss_pred EeehHHHHHHHH
Q 017586 189 ILTSKDILMRVI 200 (369)
Q Consensus 189 ivt~~dll~~~~ 200 (369)
++|..|+++.+.
T Consensus 129 iit~~dil~~l~ 140 (144)
T 2nyc_A 129 VLTLSDILKYIL 140 (144)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999985443
No 89
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.65 E-value=1.1e-15 Score=127.96 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=106.8
Q ss_pred CCccccccccccC----CeEE--eCCCcHHHHHHHHHhCCCcEeeEe--e-CCeEEEEEehHHHHHHHHHHHHHHHHhhh
Q 017586 38 LEETPVSKVMTRN----PTFV--LSDTLAVEALQKMVQGKFRHLPVV--E-NGEVIALLDIAKCLYDAIARMERAAEKGK 108 (369)
Q Consensus 38 ~~~~~v~dim~~~----~i~v--~~~~~l~ea~~~m~~~~~~~lpVv--d-~~~~vGiv~~~dil~~~~~~~~~~~~~~~ 108 (369)
+...+++++|++. ++++ .+++++.+|++.|.+++++++||+ | +|+++|+|+..|+++......... ...
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~-~~~- 85 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQ-DGV- 85 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSC-SCC-
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccC-CCc-
Confidence 3467999999986 7888 999999999999999999999999 5 689999999999987633210000 000
Q ss_pred HHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEE
Q 017586 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188 (369)
Q Consensus 109 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~G 188 (369)
..+........ .... ........+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|
T Consensus 86 -----~~~~~~~~~~~-~~~~-----~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vG 152 (185)
T 2j9l_A 86 -----VSTSIIYFTEH-SPPL-----PPYTPPTLKLRNILD--LSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLG 152 (185)
T ss_dssp -----CTTCEEECSSS-CCCC-----CTTCCCCEECGGGEE--SSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEE
T ss_pred -----cccceeecccC-Cccc-----ccccccCccHHHhhC--cCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEE
Confidence 00000000000 0000 000122346889997 5789999999999999999999999999999999999
Q ss_pred EeehHHHHHHHH
Q 017586 189 ILTSKDILMRVI 200 (369)
Q Consensus 189 ivt~~dll~~~~ 200 (369)
+||..|+++.+.
T Consensus 153 iit~~dll~~l~ 164 (185)
T 2j9l_A 153 IITKKDVLKHIA 164 (185)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999985444
No 90
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.65 E-value=7.1e-16 Score=134.76 Aligned_cols=125 Identities=15% Similarity=0.092 Sum_probs=103.5
Q ss_pred cCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeC---CEEEEEeehHHHHHHHHhc---CCC--------
Q 017586 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQ---NLP-------- 205 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~---~~~~Givt~~dll~~~~~~---~~~-------- 205 (369)
...+++++|+ ++++++.+++++.+|.++|.+++++.+||+++ ++++|+||.+||++.+... ...
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 4567999998 68999999999999999999999999999983 5799999999998432211 000
Q ss_pred ----------------------c---------------------------------------------------------
Q 017586 206 ----------------------A--------------------------------------------------------- 206 (369)
Q Consensus 206 ----------------------~--------------------------------------------------------- 206 (369)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-cccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHH
Q 017586 207 ---------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 207 ---------------~~~~v--~-~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~ 267 (369)
...++ . .+|++.|+++.+++++.++..+|...+++++||++ .|+++||||+.||++++.+
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01122 2 36888999999999999999999999999999998 7999999999999998764
No 91
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.65 E-value=1.5e-15 Score=123.68 Aligned_cols=128 Identities=13% Similarity=0.236 Sum_probs=103.6
Q ss_pred CCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHH
Q 017586 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.+...+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|+++.....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~-------------- 72 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGL-------------- 72 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCS--------------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcc--------------
Confidence 4567899999997 899999999999999999999999999998 69999999999987641100
Q ss_pred HHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeh
Q 017586 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (369)
... . .......+++++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 73 ---------~~~----~-----~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 73 ---------ERI----E-----FERLETMKVEEVMN--RNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTR 130 (157)
T ss_dssp ---------SSB----C-----GGGGGTCBGGGTCB--CCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEH
T ss_pred ---------ccc----c-----hHHhcCCcHHHHhC--CCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEH
Confidence 000 0 01133557899998 578999999999999999999887 99999 7999999999
Q ss_pred HHHHHHHH
Q 017586 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
.|+++.+.
T Consensus 131 ~dil~~~~ 138 (157)
T 2emq_A 131 REVLKQLN 138 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984443
No 92
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.65 E-value=3.9e-16 Score=123.52 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=101.2
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
-.+++++|.+++.++++++++.+|++.|.+++++++||+| +++++|+++..|+++..+..
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------------------- 67 (133)
T 1y5h_A 7 MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA------------------- 67 (133)
T ss_dssp -CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG-------------------
T ss_pred hcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc-------------------
Confidence 3589999999999999999999999999999999999997 79999999999987421100
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll 196 (369)
+. .....+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|..|++
T Consensus 68 ---~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil 126 (133)
T 1y5h_A 68 ---GL--------------DPNTATAGELAR--DSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIA 126 (133)
T ss_dssp ---TC--------------CTTTSBHHHHHT--TCCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH
T ss_pred ---CC--------------CccccCHHHHhc--CCCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH
Confidence 00 012345788887 478899999999999999999999999999989999999999998
No 93
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.65 E-value=4.8e-16 Score=129.60 Aligned_cols=149 Identities=17% Similarity=0.209 Sum_probs=107.7
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
.++++++|++ +++++.+++++.+|++.|.+++++++||+| +++++|+++..|+++............ ....
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~-----~~~~- 76 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDT-----NLFP- 76 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC---------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcc-----cccc-
Confidence 4689999998 899999999999999999999999999998 699999999999975311100000000 0000
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (369)
..+.... ...............+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+|+
T Consensus 77 ---~~~~~~~-~~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 77 ---DVDSTWK-TFNELQKLISKTYGKVVGDLMT--PSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp -------CCC-SHHHHHHHHHTTTTCBHHHHSE--ESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHH
T ss_pred ---cccchhh-hhHHHHHHHhccccccHHHHhC--CCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHH
Confidence 0000000 0111122222344567999998 5688999999999999999999999999999 8999999999999
Q ss_pred HHHHH
Q 017586 196 LMRVI 200 (369)
Q Consensus 196 l~~~~ 200 (369)
++.+.
T Consensus 151 l~~~~ 155 (180)
T 3sl7_A 151 VRAAL 155 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 85544
No 94
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.64 E-value=1e-15 Score=124.63 Aligned_cols=126 Identities=19% Similarity=0.210 Sum_probs=104.0
Q ss_pred CCccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+++++|+ ++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+++......
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~-------------- 77 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHD-------------- 77 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHT--------------
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhcc--------------
Confidence 33568999999 6899999999999999999999999999998 799999999999987633210
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehH
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (369)
. ........+++++|. +++.++++++++.++++.|.+++ ++||++ +|+++|++|.+
T Consensus 78 -----------~--------~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~ 134 (156)
T 3ctu_A 78 -----------L--------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp -----------C--------CHHHHTTSBGGGGCB--CSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETT
T ss_pred -----------c--------cccccccCcHHHhcc--CCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHH
Confidence 0 011234567999998 57889999999999999999876 699999 89999999999
Q ss_pred HHHHHHH
Q 017586 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 135 dil~~l~ 141 (156)
T 3ctu_A 135 SILKAVN 141 (156)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9984443
No 95
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.63 E-value=1.9e-15 Score=126.60 Aligned_cols=119 Identities=20% Similarity=0.199 Sum_probs=103.3
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..+++++|+++++++.+++++.+|+++|.+++++++||+| +|+++|+++..|++......
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~------------------- 68 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR------------------- 68 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG-------------------
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc-------------------
Confidence 4799999999999999999999999999999999999998 69999999999988641100
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll 196 (369)
.......+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|+||..|++
T Consensus 69 -----------------~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll 128 (184)
T 1pvm_A 69 -----------------NKKPDEVPIRLVMR--KPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLS 128 (184)
T ss_dssp -----------------CCCGGGSBGGGTSB--SSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHT
T ss_pred -----------------ccCcccCCHHHHhC--CCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHH
Confidence 00012346889998 5789999999999999999999999999999 59999999999997
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.63 E-value=2.2e-15 Score=122.13 Aligned_cols=124 Identities=23% Similarity=0.301 Sum_probs=101.6
Q ss_pred CCCccccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 017586 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
.+...+++++ ++++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|+++.....
T Consensus 19 ~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~---------------- 80 (152)
T 2uv4_A 19 SLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK---------------- 80 (152)
T ss_dssp BHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS----------------
T ss_pred hHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch----------------
Confidence 4456788888 7888999999999999999999999999998 69999999999987642100
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCC----CceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEe
Q 017586 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Giv 190 (369)
. . .....++.++|.++ .++.++++++++.++++.|.+++.+++||++ +|+++|+|
T Consensus 81 ------~--~------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGii 140 (152)
T 2uv4_A 81 ------T--Y------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIV 140 (152)
T ss_dssp ------S--C------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred ------h--h------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEE
Confidence 0 0 01123577888532 4688999999999999999999999999999 69999999
Q ss_pred ehHHHHHH
Q 017586 191 TSKDILMR 198 (369)
Q Consensus 191 t~~dll~~ 198 (369)
|..|+++.
T Consensus 141 t~~dil~~ 148 (152)
T 2uv4_A 141 SLSDILQA 148 (152)
T ss_dssp EHHHHHHH
T ss_pred EHHHHHHH
Confidence 99999843
No 97
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.63 E-value=2.3e-15 Score=143.94 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=108.6
Q ss_pred cCCCccccccCCCceeEECCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccc
Q 017586 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~ 213 (369)
...+++++|+ ++++++++++++.++++.|.++ +++++||+| +++++|++|.+|++ .. ..+.++++
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll-~~------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHH-HS------CTTSBGGG
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHh-cC------CCCCcHHH
Confidence 4567899999 5899999999999999999986 478999999 78999999999997 31 12578999
Q ss_pred ccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHHh
Q 017586 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 214 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~~ 269 (369)
+|++++.++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+..+.
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e~ 279 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 279 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHHh
Confidence 99989999999999999999999999999999999999999999999999876543
No 98
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.62 E-value=1.9e-16 Score=156.93 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=104.2
Q ss_pred cCCCccccccCCCceeEECCCCcHHHHHHHHH-HcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCC------------
Q 017586 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------ 205 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~-~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~------------ 205 (369)
...+++++|+|++++.++++++++.++.+.|. +++++.+||+| +++++|+||.+|++ +.+.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~-~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIV-DRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHT-TTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHH-HHHHHHhhhcccccccccce
Confidence 34568999998889999999999999999999 79999999999 79999999999997 43322110
Q ss_pred -----------------------------------ccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCC
Q 017586 206 -----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (369)
Q Consensus 206 -----------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g 250 (369)
....+++++|++++.++++++++.++++.|.+++.+++||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00113788999999999999999999999999999999999 689
Q ss_pred cEEEEEehhHHHHH
Q 017586 251 DVVDVVDVIHITHA 264 (369)
Q Consensus 251 ~~~Givt~~Di~~~ 264 (369)
+++|+||+.|++++
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999873
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.62 E-value=1.2e-15 Score=148.23 Aligned_cols=124 Identities=11% Similarity=0.099 Sum_probs=108.5
Q ss_pred CCCccccccCCCceeEECCC-CcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017586 141 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~-~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
..+++++|+ ++++++.++ +++.++++.|.+++++++||++ +++++|+||.+|+++.+.... .....++.++|++
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~-~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN-RQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC-CCTTSBGGGGEET
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc-CcCCCcHHHHhcC
Confidence 467999998 679999999 9999999999999999999998 789999999999985555432 2336789999999
Q ss_pred CceeecCCCCHHHHHHHhHhCCCcEeeEEcCC----CcEEEEEehhHHHHHHHHHh
Q 017586 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~----g~~~Givt~~Di~~~~~~~~ 269 (369)
++.++++++++.+++++|.++++ +||||++ |+++||||+.||++++....
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 99999999999999999977765 7999984 99999999999999876544
No 100
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.62 E-value=2.2e-15 Score=123.10 Aligned_cols=128 Identities=15% Similarity=0.210 Sum_probs=104.0
Q ss_pred CCCcccccccccc--CCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHH
Q 017586 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.+...+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++......
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~-------------- 75 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGL-------------- 75 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCS--------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhh--------------
Confidence 4567899999998 899999999999999999999999999998 68999999999987652100
Q ss_pred HHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeh
Q 017586 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (369)
... -.......+++++|. +++.++.+++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 76 ---------~~~---------~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 76 ---------ERI---------EFEKLDQITVEEVML--TDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp ---------SSB---------CGGGTTTSBHHHHSB--CSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred ---------ccc---------chhhhccCCHHHhcC--CCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 000 000123456888898 478999999999999999998876 99999 8999999999
Q ss_pred HHHHHHHH
Q 017586 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
.|+++.+.
T Consensus 134 ~dil~~~~ 141 (159)
T 1yav_A 134 RVVLKELN 141 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984433
No 101
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.61 E-value=1.3e-15 Score=146.58 Aligned_cols=115 Identities=25% Similarity=0.309 Sum_probs=103.4
Q ss_pred ccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeehHHHHHHHHhcCCCcccccccccccc-Cc
Q 017586 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 219 (369)
.++.|. .+++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|++ ++
T Consensus 115 ~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~ 186 (511)
T 3usb_A 115 SESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQL 186 (511)
T ss_dssp SSSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCC
T ss_pred cccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCC
Confidence 456676 5789999999999999999999999999998 57999999999995 2 12236789999997 89
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
+++++++++.++++.|.+++.+.+||||++|+++|+||+.||++++.
T Consensus 187 vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 187 ITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999764
No 102
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.61 E-value=9.2e-18 Score=157.01 Aligned_cols=150 Identities=22% Similarity=0.251 Sum_probs=21.7
Q ss_pred HHHHHHhhhHHHHHHHHHHHhcCCCCCChhh-HHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEE
Q 017586 100 MERAAEKGKAIAAAVEGVEKHWGTSISGPNT-FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178 (369)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~ 178 (369)
|+++++..+++..+..| |..++|.+. ..++..+.-.-.+-...|. .+++++.|+.++.+++++|.+++++.+
T Consensus 100 MDTVTe~~MAIamAr~G-----GiGvIH~n~sie~Qa~~V~~VKr~e~g~i--~dPvtl~P~~Tv~da~~l~~~~~isgv 172 (556)
T 4af0_A 100 MDTVTEDRMAIALALHG-----GLGIIHHNCSAEEQAAMVRRVKKYENGFI--TDPLCLGPDATVGDVLEIKAKFGFCGV 172 (556)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHHHHCCC--------------------------------
T ss_pred cccccCHHHHHHHHHCC-----CeEEEcCCCCHHHHHHHHHHHHhcccCcc--CCCeEcCCCCCHHHHHHHHHHhCCCcc
Confidence 44556677777777776 788887763 2222222111111233444 579999999999999999999999999
Q ss_pred EEEe----CCEEEEEeehHHHHHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEE
Q 017586 179 VVTV----ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254 (369)
Q Consensus 179 ~V~~----~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~G 254 (369)
||++ +++++||+|.+|+ ++. + ...+++++|++++++++++.++.+|.++|.++++..+||||++|+++|
T Consensus 173 pVvd~g~~~~kLvGIvT~RD~--rf~----d-~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvG 245 (556)
T 4af0_A 173 PITETGEPDSKLLGIVTGRDV--QFQ----D-AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVS 245 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCcCCEEEEEEecccc--ccc----c-cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEE
Confidence 9998 3689999999998 331 1 257899999999999999999999999999999999999999999999
Q ss_pred EEehhHHHH
Q 017586 255 VVDVIHITH 263 (369)
Q Consensus 255 ivt~~Di~~ 263 (369)
+||+.|+.+
T Consensus 246 lIT~kDi~k 254 (556)
T 4af0_A 246 LVARSDLLK 254 (556)
T ss_dssp ---------
T ss_pred EEEechhhh
Confidence 999999998
No 103
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.60 E-value=3.7e-15 Score=133.66 Aligned_cols=121 Identities=14% Similarity=0.234 Sum_probs=106.1
Q ss_pred ccCCCCccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhh
Q 017586 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKG 107 (369)
Q Consensus 34 ~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~ 107 (369)
.-......+++++|+++++++++++++.+|++.|.++ +++++||+| +++++|+|+..|++..
T Consensus 130 ~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~------------ 197 (286)
T 2oux_A 130 ELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN------------ 197 (286)
T ss_dssp HHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS------------
T ss_pred HHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC------------
Confidence 3346678899999999999999999999999999987 889999998 7999999999998642
Q ss_pred hHHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEE
Q 017586 108 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKP 186 (369)
Q Consensus 108 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~ 186 (369)
....+++++|. +++.++++++++.++++.|.+++.+++||++ +|++
T Consensus 198 -------------------------------~~~~~v~~im~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 244 (286)
T 2oux_A 198 -------------------------------DDDTLIADILN--ERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHL 244 (286)
T ss_dssp -------------------------------CTTSBHHHHSB--SCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBE
T ss_pred -------------------------------CCCCcHHHHcC--CCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 12345788887 5688999999999999999999999999999 7999
Q ss_pred EEEeehHHHHHHH
Q 017586 187 RGILTSKDILMRV 199 (369)
Q Consensus 187 ~Givt~~dll~~~ 199 (369)
+|+||..|++..+
T Consensus 245 vGiIT~~Dil~~i 257 (286)
T 2oux_A 245 LGIVTVDDIIDVI 257 (286)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998433
No 104
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.59 E-value=2.3e-16 Score=151.12 Aligned_cols=114 Identities=17% Similarity=0.178 Sum_probs=90.1
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccc-c-Cc
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NP 219 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~-~-~~ 219 (369)
++.++|. .+++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|+ + ++
T Consensus 90 ~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~-~-----~~~~~~~v~diM~p~~~~ 161 (496)
T 4fxs_A 90 IFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR-F-----VTDLTKSVAAVMTPKERL 161 (496)
T ss_dssp HCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT-T-----CCCTTSBGGGTSEEGGGC
T ss_pred ccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh-h-----cccCCCcHHHHhcCCCCC
Confidence 4577888 6899999999999999999999999999999 89999999999994 1 1223678999998 4 58
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHH
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~ 264 (369)
+++++++++.++++.|.+++.+.+||||++|+++|+||+.||++.
T Consensus 162 vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 162 ATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp CEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHh
Confidence 999999999999999999999999999999999999999999985
No 105
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.58 E-value=9.7e-15 Score=130.49 Aligned_cols=118 Identities=21% Similarity=0.262 Sum_probs=104.8
Q ss_pred CCCccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHH
Q 017586 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAI 110 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~ 110 (369)
.....+++++|+++++++++++++.+|++.|.++ ++.++||+| +++++|+++..|++..
T Consensus 131 ~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp HSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 4557899999999999999999999999999987 789999998 6999999999998742
Q ss_pred HHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEE
Q 017586 111 AAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (369)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Gi 189 (369)
....+++++|. ++++++++++++.++++.|.+++.+.+||++ +|+++|+
T Consensus 196 ----------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGi 245 (278)
T 2yvy_A 196 ----------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGI 245 (278)
T ss_dssp ----------------------------CTTCBSTTTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred ----------------------------CCCCcHHHHhC--CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEE
Confidence 12346899997 5789999999999999999999999999999 7999999
Q ss_pred eehHHHHHHHH
Q 017586 190 LTSKDILMRVI 200 (369)
Q Consensus 190 vt~~dll~~~~ 200 (369)
||..|++ ..+
T Consensus 246 vT~~Dil-~~i 255 (278)
T 2yvy_A 246 VTVDDVL-DVL 255 (278)
T ss_dssp EEHHHHH-HHC
T ss_pred EEHHHHH-HHH
Confidence 9999998 443
No 106
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.51 E-value=4.9e-16 Score=148.84 Aligned_cols=115 Identities=22% Similarity=0.251 Sum_probs=2.7
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccc-c-Cce
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPE 220 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~-~-~~~ 220 (369)
+++++|. .+++++++++++.+++++|.+++++.+||+++++++|+||.+|+. .. .....++.++|+ + +++
T Consensus 89 ~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~-~~-----~~~~~~V~~vMtp~~~~v 160 (490)
T 4avf_A 89 KHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLR-VK-----PNAGDTVAAIMTPKDKLV 160 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhh-hc-----cccCCcHHHHhccCCCCE
Confidence 3678888 678999999999999999999999999999988999999999994 21 112578999998 4 699
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
++++++++.+++++|.+++.+.+||||++|+++|+||+.||+++.
T Consensus 161 tv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 161 TAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 999999999999999999999999999999999999999999864
No 107
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.50 E-value=1.2e-13 Score=132.11 Aligned_cols=120 Identities=20% Similarity=0.221 Sum_probs=105.7
Q ss_pred cCCCCccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhh
Q 017586 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK 108 (369)
Q Consensus 35 ~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~ 108 (369)
.....+.+++++|+++++++++++++.+|++.|.++ +++++||+| +++++|+++.+|++..
T Consensus 149 ~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~------------- 215 (473)
T 2zy9_A 149 LARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------------- 215 (473)
T ss_dssp HHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-------------
T ss_pred HhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-------------
Confidence 335667899999999999999999999999999986 589999998 6899999999998742
Q ss_pred HHHHHHHHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEE
Q 017586 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPR 187 (369)
Q Consensus 109 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~ 187 (369)
....+++++|. +++.++++++++.++++.|.+++...+||+| +|+++
T Consensus 216 ------------------------------~~~~~v~dim~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lv 263 (473)
T 2zy9_A 216 ------------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 263 (473)
T ss_dssp ------------------------------CTTSBGGGTSB--SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEE
T ss_pred ------------------------------CCCCcHHHHhC--CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEE
Confidence 12346899997 5789999999999999999999999999999 89999
Q ss_pred EEeehHHHHHHH
Q 017586 188 GILTSKDILMRV 199 (369)
Q Consensus 188 Givt~~dll~~~ 199 (369)
|+||.+|+++.+
T Consensus 264 GiIT~~Dil~~i 275 (473)
T 2zy9_A 264 GIVTVDDVLDVL 275 (473)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEehHhhHHHH
Confidence 999999998443
No 108
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.49 E-value=1.1e-13 Score=121.24 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=108.8
Q ss_pred CccCCcCEEEEEcCCCcEEEEEehhHHHHHHHhccCC---------------------------------------CCcc
Q 017586 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN---------------------------------------LEET 41 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~di~~~~~~~~~~---------------------------------------~~~~ 41 (369)
|.+++++++||+|++|+++|++|..|+++.+...... ....
T Consensus 33 m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~ 112 (245)
T 3l2b_A 33 MRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAE 112 (245)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGG
T ss_pred HHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChH
Confidence 6789999999999889999999999999776532100 0011
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Q 017586 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (369)
.+.+.+.++.+.+-.+ -.++...+.++++..+++.++..+ ..++... .. ...
T Consensus 113 ~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~-----~~~v~~~-a~--------------------~~~ 164 (245)
T 3l2b_A 113 SLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTP-----SKEIIEL-AK--------------------KNN 164 (245)
T ss_dssp GGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCC-----CHHHHHH-HH--------------------HHT
T ss_pred HHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCC-----CHHHHHH-HH--------------------HcC
Confidence 1222333333333322 477888888999998888753221 0111110 00 000
Q ss_pred CCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH
Q 017586 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 122 g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll 196 (369)
...+..+.+.+..........+++++|+| +++.++++++++.++++.|.+++++++||+| +|+++|++|.+|++
T Consensus 165 ~~~i~t~~d~~~~~~~~~~~~~v~~im~~-~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll 239 (245)
T 3l2b_A 165 ITVITTPHDSFTASRLIVQSLPVDYVMTK-DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLI 239 (245)
T ss_dssp CEEEECSSCHHHHHHHGGGGSBHHHHSBC-TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC---
T ss_pred CeEEEeCCChHHHHHHHhcCCceeeEecC-CccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhh
Confidence 00111122333333444455679999987 6799999999999999999999999999999 79999999999997
No 109
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.49 E-value=1.2e-13 Score=134.37 Aligned_cols=122 Identities=12% Similarity=0.204 Sum_probs=103.2
Q ss_pred CCccccccccccCCeEEeCC-CcHHHHHHHHHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHH
Q 017586 38 LEETPVSKVMTRNPTFVLSD-TLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~-~~l~ea~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+|+++|+++++++.++ +++.+|+++|.+++++++||+| +++++|+|+..|+++.....
T Consensus 381 l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~--------------- 445 (527)
T 3pc3_A 381 WWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM--------------- 445 (527)
T ss_dssp TTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH---------------
T ss_pred ccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc---------------
Confidence 34688999999999999999 9999999999999999999998 68999999999998763311
Q ss_pred HHHHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeC-----CEEEEE
Q 017586 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRGI 189 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~-----~~~~Gi 189 (369)
......+++++|. +++.++++++++.++++.|.++++ +||+++ |+++||
T Consensus 446 ----------------------~~~~~~~V~~im~--~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGI 499 (527)
T 3pc3_A 446 ----------------------NRQQSDPAIKALN--KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKAL 499 (527)
T ss_dssp ----------------------CCCTTSBGGGGEE--TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEE
T ss_pred ----------------------cCcCCCcHHHHhc--CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEE
Confidence 0122456899998 679999999999999999976654 699984 899999
Q ss_pred eehHHHHHHHH
Q 017586 190 LTSKDILMRVI 200 (369)
Q Consensus 190 vt~~dll~~~~ 200 (369)
||..|+++.+.
T Consensus 500 VT~~Dll~~l~ 510 (527)
T 3pc3_A 500 ATKLDVTTFIA 510 (527)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999984443
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.48 E-value=2.6e-13 Score=130.90 Aligned_cols=115 Identities=21% Similarity=0.304 Sum_probs=104.0
Q ss_pred ccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeehHHHHHHHHhcCCCcccccccccccc-Cc
Q 017586 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 219 (369)
++++|. .+++++++++++.++++.|.+++++.+||++ +++++|+||.+|++ .. . ....++.++|++ ++
T Consensus 92 ~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~ 163 (491)
T 1zfj_A 92 SENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR-FI--S---DYNAPISEHMTSEHL 163 (491)
T ss_dssp HTTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHH-HC--S---CSSSBTTTSCCCSCC
T ss_pred HHhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHh-hh--c---cCCCcHHHHcCCCCC
Confidence 467888 5788999999999999999999999999997 68999999999996 32 1 136789999988 89
Q ss_pred eeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
+++++++++.++++.|.+++.+.+||||++|+++|+||..||++.+.
T Consensus 164 ~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp CCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999765
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=1.7e-15 Score=145.80 Aligned_cols=116 Identities=21% Similarity=0.184 Sum_probs=1.3
Q ss_pred cc-ccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-C---CEEEEEeehHHHHHHHHhcCCCccccccccccccC--
Q 017586 146 TI-IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN-- 218 (369)
Q Consensus 146 ~i-m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~---~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~-- 218 (369)
++ |. ++++++++++++.++++.|.+++++++||++ + ++++|+||.+|++ .. . .....++.++|+++
T Consensus 100 e~gM~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~-~~-~---~~~~~~V~diM~~~~~ 172 (503)
T 1me8_A 100 KAGFV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYP-ID-L---TQTETKVSDMMTPFSK 172 (503)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred ccCcc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHH-hh-h---ccccCcHHHHhCCCCC
Confidence 44 77 5799999999999999999999999999999 5 7999999999996 32 1 12357899999876
Q ss_pred ceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHH
Q 017586 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~ 268 (369)
++++++++++.+|+++|.+++.+.+||+|++|+++|+||..||++++...
T Consensus 173 ~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 173 LVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -------------------------------------------------C
T ss_pred CEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999987643
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.46 E-value=2.3e-13 Score=130.85 Aligned_cols=160 Identities=13% Similarity=0.190 Sum_probs=123.2
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
+..+.|.++++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~----------------------- 170 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI----------------------- 170 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC-----------------------
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh-----------------------
Confidence 45677888999999999999999999999999999998 5799999999997521
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
.....+++++|++ .+++++++++++.++++.|.+++.+.+||+| +|+++|++|.+|++
T Consensus 171 -------------------~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil- 229 (511)
T 3usb_A 171 -------------------QDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIE- 229 (511)
T ss_dssp -------------------CCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHH-
T ss_pred -------------------ccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHH-
Confidence 0123458889984 4799999999999999999999999999999 89999999999998
Q ss_pred HHHhcCCCccccccccccccCc--eeecCCCCHHHHHHHhHhCCCcEeeEEcCCC
Q 017586 198 RVISQNLPADSTLVEKVMTPNP--ECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (369)
Q Consensus 198 ~~~~~~~~~~~~~v~~~m~~~~--~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g 250 (369)
+.+... ....+.+.+.. ..+.......+.++.+.+.+...+.|-..++
T Consensus 230 ~~~~~p-----~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 230 KVIEFP-----NSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp HHHHCT-----TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred Hhhhcc-----cchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 444331 12233333322 2333344456667778888988777655554
No 113
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.45 E-value=1.2e-14 Score=139.88 Aligned_cols=167 Identities=14% Similarity=0.089 Sum_probs=26.0
Q ss_pred ccccc-cccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 017586 42 PVSKV-MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 42 ~v~di-m~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~----~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+..++ |+++++++++++++.+|+++|.+++++++||+|+ ++++|+|+.+|++.. .
T Consensus 97 ~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~------------------ 156 (503)
T 1me8_A 97 KNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L------------------ 156 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h------------------
Confidence 34455 9999999999999999999999999999999984 799999999998742 0
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHH
Q 017586 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (369)
.....+++++|++..+++++++++++.++++.|.+++++.+||+| +++++|+||.+|+
T Consensus 157 ---------------------~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Di 215 (503)
T 1me8_A 157 ---------------------TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDY 215 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHH
Confidence 011235889998544599999999999999999999999999999 8999999999999
Q ss_pred HHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEE
Q 017586 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254 (369)
Q Consensus 196 l~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~G 254 (369)
++.+. ..... ..+...++. ...++. ....+.++.|.+.+.+.++|-..+|...|
T Consensus 216 l~~~~-~~~~~-~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 216 DRSQV-CHNEL-VDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp -------CCCC-BCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred HHhhh-cccch-hcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 84443 22211 112223332 123444 56667788888888887655233444433
No 114
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.44 E-value=9.6e-14 Score=137.52 Aligned_cols=156 Identities=13% Similarity=0.096 Sum_probs=102.4
Q ss_pred Cccccccccc--cCCeEEeCCCcHHHHHHHHH-hCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhh--HHHH
Q 017586 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMV-QGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK--AIAA 112 (369)
Q Consensus 39 ~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~-~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~--~~~~ 112 (369)
.+++++|+|+ +++.++++++++.++.+.|. +++++++||+| +++++|+++.+|+.+.............. ....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 5789999999 89999999999999999999 89999999999 69999999999998653221100000000 0000
Q ss_pred --HHHHHHHhcCCCCCC-h----hhHHHHHHHH-hcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCC
Q 017586 113 --AVEGVEKHWGTSISG-P----NTFIETLRER-MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN 184 (369)
Q Consensus 113 --~~~~~~~~~g~~~~~-~----~~~~~~~~~~-~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~ 184 (369)
....+.+........ + ....+..... -...+++++|+ +++.++++++++.++++.|.+++.+++||+++|
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt--~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G 608 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCD--VSPIVVTSYSLVRQLHFLFVMLMPSMIYVTERG 608 (632)
T ss_dssp ----------------------------------------CCSCC--CCCCEEETTCBHHHHHHHHHHTCCSEEEEEETT
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhc--CCCceecCCCcHHHHHHHHHhcCCCEEEEEECC
Confidence 000000000000000 0 0000000000 01124789998 678999999999999999999999999999999
Q ss_pred EEEEEeehHHHH
Q 017586 185 KPRGILTSKDIL 196 (369)
Q Consensus 185 ~~~Givt~~dll 196 (369)
+++|+||.+|++
T Consensus 609 ~lvGIVT~~Dll 620 (632)
T 3org_A 609 KLVGIVEREDVA 620 (632)
T ss_dssp EEEEEEEGGGTE
T ss_pred EEEEEEehhhHH
Confidence 999999999997
No 115
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.43 E-value=4.7e-13 Score=92.67 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=62.6
Q ss_pred eeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCceee
Q 017586 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 154 ~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+++++|++++.+|++.|.+++++++||+++|+++||+|.+|+++++...+.+..+.+++++|++++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 689999999999999999999999999999999999999999877777777666789999999988764
No 116
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.40 E-value=2.5e-14 Score=138.03 Aligned_cols=117 Identities=25% Similarity=0.327 Sum_probs=6.1
Q ss_pred ccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccccc--Cce
Q 017586 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPE 220 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~--~~~ 220 (369)
+.++|. ++++++++++++.++++.|.+++++.+||+| +++++|+||.+|+. +. . ....++.++|++ ++.
T Consensus 97 ~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 97 TENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR-FE--K---NLSKKIKDLMTPREKLI 168 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHH-hh--c---CCCCcHHHHhCCCCCCe
Confidence 577887 5799999999999999999999999999999 78999999999996 32 1 125789999997 899
Q ss_pred eecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHHHH
Q 017586 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~~~ 268 (369)
++++++++.++++.|.+++++.+||||++|+++|+||..|+++.+...
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ----------------------------------------CHHHHTCT
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 999999999999999999999999999999999999999999976543
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.37 E-value=5.4e-13 Score=127.84 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=89.5
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 017586 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
.++.++|+++++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------------------------ 144 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------------------------ 144 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC------------------------
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc------------------------
Confidence 356788999999999999999999999999999999998 7999999999997521
Q ss_pred hcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH
Q 017586 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll 196 (369)
.....+++++|+|+.++++++++.++.++++.|.+++...+||+| +|+++|+||.+|++
T Consensus 145 ------------------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 145 ------------------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFH 204 (496)
T ss_dssp ------------------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC---
T ss_pred ------------------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHH
Confidence 012346899998534699999999999999999999999999999 89999999999998
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.34 E-value=4.4e-13 Score=128.37 Aligned_cols=115 Identities=24% Similarity=0.296 Sum_probs=3.4
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 017586 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
.+++++|.++++++++++++.+|+++|.+++++++||+|+++++|+|+.+|+...
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~------------------------- 142 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVK------------------------- 142 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhc-------------------------
Confidence 3578899999999999999999999999999999999999999999999997521
Q ss_pred cCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
.....+++++|+|+.+++++++++++.++++.|.+++.+.+||+| +++++|+||.+|+++
T Consensus 143 -----------------~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~ 203 (490)
T 4avf_A 143 -----------------PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEK 203 (490)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -----------------cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhh
Confidence 011235888998534699999999999999999999999999999 899999999999983
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.33 E-value=1.1e-13 Score=132.84 Aligned_cols=112 Identities=29% Similarity=0.408 Sum_probs=0.9
Q ss_pred ccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCceeec
Q 017586 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~ 223 (369)
..+.|. .+++++++++++.++++.|.+++++++||+++++++|+||.+|++ . . ...++.++|++++.+++
T Consensus 95 ~~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~-~---~----~~~~v~~im~~~~~~v~ 164 (486)
T 2cu0_A 95 AERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIA-A---R----EGKLVKELMTKEVITVP 164 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhc-c---C----CCCCHHHHccCCCeEEC
Confidence 355676 679999999999999999999999999999889999999999996 3 1 25689999998899999
Q ss_pred CCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 224 ~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
+++++.++++.|.+++.+.+||||++|+++|+||..||++..
T Consensus 165 ~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 165 ESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------
T ss_pred CcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 999999999999999999999999999999999999999864
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=1.3e-12 Score=126.02 Aligned_cols=116 Identities=22% Similarity=0.361 Sum_probs=4.3
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 017586 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
++.++|+++++++++++++.+|++.|.+++++.+||+| +++++|+|+..|+... .
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~--~---------------------- 151 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE--K---------------------- 151 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh--c----------------------
Confidence 46889999999999999999999999999999999998 6899999999998642 0
Q ss_pred cCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHH
Q 017586 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 199 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~ 199 (369)
-...+++++|++..++.++++++++.++++.|.+++++.+||+| +++++|++|..|+++..
T Consensus 152 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 152 ------------------NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVI 213 (494)
T ss_dssp ---------------------------------------------------------------------------CHHHH
T ss_pred ------------------CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhh
Confidence 01234788888433799999999999999999999999999999 89999999999998443
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.28 E-value=6.9e-11 Score=113.96 Aligned_cols=116 Identities=17% Similarity=0.249 Sum_probs=101.2
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 017586 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
++.++|+++++++++++++.++++.|.+++++++||+| +++++|+|+.+|++..
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~----------------------- 147 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI----------------------- 147 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----------------------
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----------------------
Confidence 45789999999999999999999999999999999997 5899999999998642
Q ss_pred HhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHH
Q 017586 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~ 197 (369)
.-...+++++|++ .++.++++++++.++++.|.+++.+.+||+| +++++|++|..|+++
T Consensus 148 -------------------~~~~~~v~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~ 207 (491)
T 1zfj_A 148 -------------------SDYNAPISEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEK 207 (491)
T ss_dssp -------------------SCSSSBTTTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred -------------------ccCCCcHHHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHH
Confidence 0123468999983 2688999999999999999999999999999 899999999999984
Q ss_pred HHH
Q 017586 198 RVI 200 (369)
Q Consensus 198 ~~~ 200 (369)
...
T Consensus 208 ~~~ 210 (491)
T 1zfj_A 208 VIE 210 (491)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.26 E-value=1.1e-13 Score=134.01 Aligned_cols=117 Identities=24% Similarity=0.303 Sum_probs=69.8
Q ss_pred CccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEeC----CEEEEEeehHHHHHHHHhcCCCcccccccccccc-
Q 017586 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP- 217 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~----~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~- 217 (369)
++.++|. ++++++++++++.++++.|.+++++.+||+|+ ++++|+||.+|+. .... .....++.++|++
T Consensus 109 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~ 182 (514)
T 1jcn_A 109 NFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPR 182 (514)
T ss_dssp TCCTTSC--SSCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------CC
T ss_pred hhhhccc--cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCC
Confidence 4778888 57889999999999999999999999999984 7999999999995 3211 1125689999998
Q ss_pred -CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHH
Q 017586 218 -NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 218 -~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~ 265 (369)
++.++++++++.++++.|.+++.+.+||||++|+++|+||+.|+++++
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 899999999999999999999999999999999999999999988743
No 123
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.18 E-value=4.4e-12 Score=121.82 Aligned_cols=162 Identities=16% Similarity=0.166 Sum_probs=23.1
Q ss_pred cccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcC
Q 017586 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122 (369)
Q Consensus 43 v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 122 (369)
+.++|..+++++++++++.++++.|.+++++++||+++++++|+|+.+|++..
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~--------------------------- 147 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------------------------- 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccC---------------------------
Confidence 46689899999999999999999999999999999988999999999997630
Q ss_pred CCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHHHHHHh
Q 017586 123 TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll~~~~~ 201 (369)
...+++++|. +++.++++++++.++++.|.+++.+.+||++ +++++|++|.+|++ +...
T Consensus 148 -----------------~~~~v~~im~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil-~~~~ 207 (486)
T 2cu0_A 148 -----------------EGKLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV-ARKK 207 (486)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------CCCCHHHHcc--CCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHH-Hhhh
Confidence 0124778887 4688999999999999999999999999999 88999999999998 4433
Q ss_pred cCCCccccccccccccCceeecCCCCHHHHHHHhHhCCCcEeeEEc-CCCcEEEEEe
Q 017586 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVD 257 (369)
Q Consensus 202 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Givt 257 (369)
.... .......++.. ..++.. . .+.+..+.+.+...+ |++ ..|...++++
T Consensus 208 ~~~~-~~~~~g~~~v~--~~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 208 YKNA-VRDENGELLVA--AAVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp CTTC-CBCTTSCBCCE--EEECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred cccc-ccccCCceeec--ceechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 2110 00001111111 122233 3 556777888888865 555 4565555543
No 124
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.15 E-value=1.1e-11 Score=116.38 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=0.9
Q ss_pred ccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 017586 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 44 ~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~----~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
+..|..+++++.|+.++.+|+.+|.+++++.+||+++ ++++|+++.+|+-..
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------ 196 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------ 196 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc------------------------
Confidence 3457778999999999999999999999999999974 689999999996321
Q ss_pred hcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH
Q 017586 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll 196 (369)
-...+++++|+ +++++++...++.+|.++|.++++..+||+| +++++|+||.+|+.
T Consensus 197 -------------------d~~~~V~evMT--~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~ 253 (556)
T 4af0_A 197 -------------------DAETPIKSVMT--TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLL 253 (556)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -------------------ccceEhhhhcc--cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhh
Confidence 01235889999 5799999999999999999999999999999 89999999999997
No 125
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.12 E-value=2e-11 Score=84.42 Aligned_cols=53 Identities=25% Similarity=0.525 Sum_probs=48.3
Q ss_pred CccCCcCEEEEEcCCCcEEEEEehhHHHHHHHhccCCCCccccccccccCCeEE
Q 017586 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFV 54 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~di~~~~~~~~~~~~~~~v~dim~~~~i~v 54 (369)
|.+++++++||+| +|+++||+|++|+++++...+.++.+.+++++|+++++++
T Consensus 18 M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 18 LSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp HHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred HHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 7889999999998 6899999999999988888888888999999999998764
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.09 E-value=4.1e-10 Score=77.88 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=58.0
Q ss_pred eeEECCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCceee
Q 017586 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 154 ~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+.++++++++.+|++.|.+++++++||+++++++|++|.+|+++.+...+......+++++|++++.++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 678999999999999999999999999999999999999999844444433344678999998877653
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.08 E-value=1e-11 Score=120.31 Aligned_cols=115 Identities=11% Similarity=0.190 Sum_probs=68.0
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 017586 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~----~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~ 117 (369)
++.++|.++++++.+++++.+|+++|.+++++.+||+|+ ++++|+|+..|+.... .
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~--~------------------ 168 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA--E------------------ 168 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC------------------------
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh--h------------------
Confidence 678999999999999999999999999999999999985 7999999999875420 0
Q ss_pred HHhcCCCCCChhhHHHHHHHHhcCCCccccccCCCceeEECCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeehHHHH
Q 017586 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 118 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dll 196 (369)
.....+++++|.+..++.++++++++.++++.|.+++...+||+| +|+++|++|.+|++
T Consensus 169 --------------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 169 --------------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLK 228 (514)
T ss_dssp --------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCS
T ss_pred --------------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHH
Confidence 011235788888323799999999999999999999999999999 89999999999997
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.57 E-value=1.2e-07 Score=65.16 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=44.1
Q ss_pred CceeecCCCCHHHHHHHhHhCCCcEeeEEcCCCcEEEEEehhHHHHHHH
Q 017586 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~Di~~~~~ 266 (369)
++.++++++++.+|++.|.+++++.+||+|+ |+++|+||..|+++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 4678999999999999999999999999997 99999999999998543
No 129
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.41 E-value=5.4e-05 Score=54.68 Aligned_cols=55 Identities=9% Similarity=0.056 Sum_probs=44.0
Q ss_pred HHhhcCCCCCCCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 289 DSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 289 ~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
+..+.+..++++++|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 32 ~~~l~~~l~~~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~~--------f~V~~~d~~rI~~v~v 87 (91)
T 2pli_A 32 NTFFGTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQ--------FTVARADNRRLHTLMA 87 (91)
T ss_dssp HHHHCCCCCCSSCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEEE
T ss_pred HHHhCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEEE
Confidence 3444555555679999999999999999999999998888 9999987 55655543
No 130
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=97.38 E-value=3.9e-05 Score=54.36 Aligned_cols=55 Identities=11% Similarity=0.068 Sum_probs=44.2
Q ss_pred HHhhcCCCCCCCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCCC-ceeEEec
Q 017586 289 DSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFTC 351 (369)
Q Consensus 289 ~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~g-~~~~~~~ 351 (369)
+..+.+..++++|+|++|++...++++|..|+.+.+.++. |+|.+++| ++.+.++
T Consensus 23 ~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 78 (83)
T 3llb_A 23 NDFFGSEFSDEEFDTVGGLVMSAFGHLPKRNEVVELGEFR--------FRVLNADSRRVHLLRL 78 (83)
T ss_dssp HHHHCCCCCTTTCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEEE
T ss_pred HHHhCCCCCCCCCcCHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 3444555566679999999999999999999999999888 99999976 5544443
No 131
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=97.35 E-value=4.3e-05 Score=53.90 Aligned_cols=54 Identities=6% Similarity=0.040 Sum_probs=43.5
Q ss_pred HHHhhcCCCCCCCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCCC-ceeEE
Q 017586 288 WDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRF 349 (369)
Q Consensus 288 ~~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~g-~~~~~ 349 (369)
.+..+.+..++++++|++|++...++++|+.|+.+.+.++. |+|.+++| ++.+.
T Consensus 22 l~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v 76 (81)
T 3lae_A 22 LNKMFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLL--------ITILEVGDNMIKQA 76 (81)
T ss_dssp HHHHHCCCCCCSSCSBHHHHHHHHCSSCCCTTCEEEETTEE--------EEEEEEETTEEEEE
T ss_pred HHHHhCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEE
Confidence 34445555566679999999999999999999999999888 99999975 44443
No 132
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=97.26 E-value=7.4e-05 Score=53.35 Aligned_cols=45 Identities=9% Similarity=-0.038 Sum_probs=38.6
Q ss_pred CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 37 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 82 (86)
T 2pls_A 37 GVYHTLSGMIMWLLGRLPQTGDITFWENWR--------LEVIDMDSKRIDKVLA 82 (86)
T ss_dssp CSCCBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 578999999999999999999999998888 9999986 55555443
No 133
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=97.22 E-value=7e-05 Score=54.43 Aligned_cols=45 Identities=4% Similarity=0.118 Sum_probs=38.7
Q ss_pred CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 45 ~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 90 (94)
T 2oai_A 45 NNYHTLAGMCISYFGRIPHVGEYFDWAGWR--------IEIVDLDGARIDXLLL 90 (94)
T ss_dssp CCCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEcCCEEEEEEE
Confidence 568999999999999999999999998888 9999986 55555544
No 134
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=97.21 E-value=9.2e-05 Score=53.33 Aligned_cols=54 Identities=6% Similarity=-0.061 Sum_probs=42.4
Q ss_pred HhhcCCCCC--CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 290 SAMALSPND--DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 290 ~~~~~~~~~--~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
..+.+..++ ++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.|.++
T Consensus 30 ~~l~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~v~v 86 (90)
T 2p13_A 30 NLLEHDLVDEAERYSTLGGYLLWQFGYIPAAGEQITVDGLI--------FEIVSVNKHNIGKVRV 86 (90)
T ss_dssp HHHTSCCCCTTCCCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEECCBCSSSBCEEEE
T ss_pred HHHCCCCCCcCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEEE
Confidence 334444444 578999999999999999999999998888 9999997 55555443
No 135
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=97.21 E-value=0.00011 Score=53.33 Aligned_cols=55 Identities=5% Similarity=0.014 Sum_probs=43.2
Q ss_pred HHhhcCCCCCCCcccccccccccccCCCCcccccCC--CCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 289 DSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSY--PSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 289 ~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
+..+.+..++++++|++|++...++++|..|+.+.+ .++. |+|.+++ +++.+.++
T Consensus 30 ~~~l~~~l~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~~--------f~V~~~~~~rI~~v~v 87 (93)
T 2r2z_A 30 NEVFETDLHMSDVDTMAGYLITALGTIPDEGEKPSFEVGNIK--------LTAEEMEGTRLLVLRV 87 (93)
T ss_dssp HHHHTCCCCCTTCCBHHHHHHHHHSSCCCTTCCCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HHHhCCCCCCCCcccHHHHHHHHhCCCCCCCCEEEEecCCEE--------EEEEEeeCCEEEEEEE
Confidence 334445555567999999999999999999999877 8888 9999986 55655544
No 136
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=97.21 E-value=9.4e-05 Score=54.27 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=43.0
Q ss_pred HhhcCCCCCCCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCCCc------eeEEec
Q 017586 290 SAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGL------MHRFTC 351 (369)
Q Consensus 290 ~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~g~------~~~~~~ 351 (369)
..+.+..++++|+|++|++...++++|..|+.+.++ +. |+|.+++|+ +.+.++
T Consensus 27 ~~lg~~l~~e~~dTlgGli~~~lg~iP~~Gd~v~~~-~~--------f~V~~~d~~~~~r~rI~~V~v 85 (101)
T 2p3h_A 27 RAIGYELPEGDYETISGLLFDHANALLKTGDVIEIP-LD--------FEPEDYLNNTSPTQRILRITV 85 (101)
T ss_dssp HHHTSCCCCSSCCBHHHHHHHHHCSCCCTTCEEEEE-CC--------CCGGGGTTCSSCCCCEEEEEE
T ss_pred HHhCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEEe-EE--------EEEEEEeCCCCcCCEEEEEEE
Confidence 334445555679999999999999999999999988 99 999999865 666554
No 137
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=97.14 E-value=0.00012 Score=52.20 Aligned_cols=56 Identities=7% Similarity=0.062 Sum_probs=43.5
Q ss_pred HHHhhcCC-CCC-CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 288 WDSAMALS-PND-DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 288 ~~~~~~~~-~~~-~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
.+..+.+. .++ ++++|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 22 l~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 80 (86)
T 2p4p_A 22 VMRALNIHTFPRDENYETIGGFMMYMLRXIPXXTDFVLYDXYX--------FEIIDTENFRIDQLMV 80 (86)
T ss_dssp HHHHTTCCCSCCSCSSCBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HHHHhCCCCCCcCCCCccHHHHHHHHhCCCCCCCcEEEEeeEE--------EEEEEccCCEEEEEEE
Confidence 34445553 443 569999999999999999999999998888 9999986 55555443
No 138
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.13 E-value=8e-05 Score=53.89 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=43.5
Q ss_pred HHhhcCC-CC-CCCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 289 DSAMALS-PN-DDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 289 ~~~~~~~-~~-~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
+..+.+. .+ +++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 31 ~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~V~v 88 (92)
T 2o3g_A 31 APQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWR--------FEVVEKEGQRIERVKI 88 (92)
T ss_dssp TTTTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HHHhCCCCCCcCCCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 4444554 45 4579999999999999999999999998888 9999986 55555443
No 139
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=97.03 E-value=0.00011 Score=52.45 Aligned_cols=56 Identities=11% Similarity=0.046 Sum_probs=42.8
Q ss_pred HHHhhcCCCCCCCcccccccccccccCCCCccc--ccCCCC----CCCCCCCceeEEeeCCC-CceeEEec
Q 017586 288 WDSAMALSPNDDEEDNRSEGSLKFASEGADTAR--YLSYPS----PSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 288 ~~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~--~~~~~~----~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
.+..+.+..++++|+|++|++...++++|..|+ .+.+.+ +. |+|.+++ +++.+.++
T Consensus 21 l~~~l~~~l~~~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~~~~~~~--------f~V~~~~~~rI~~v~v 83 (87)
T 2rk5_A 21 FNEYFETDLESDNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLE--------LINDKVKDGRVTKLKI 83 (87)
T ss_dssp HHHHHTCCCCCTTCCBHHHHHHHHHCSCCCSSSCCEEEEEETTEEEE--------EEEEEEETTEEEEEEE
T ss_pred HHHHhCCCCCCCCcccHHHHHHHHhCcCCCCCCcEEEEECCceEEEE--------EEEEEEeCCEEEEEEE
Confidence 344445555666799999999999999999999 887776 66 9999986 55555443
No 140
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=97.03 E-value=0.00021 Score=51.81 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=39.1
Q ss_pred CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCC-CceeEEec
Q 017586 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~-g~~~~~~~ 351 (369)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.+.++
T Consensus 44 ~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 89 (93)
T 2nqw_A 44 DEVDTLSGLFLEIKQELPHVGDTAVYEPFR--------FQVTQMDKRRIIEIKI 89 (93)
T ss_dssp TTCSBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEECSSSEEEEEE
T ss_pred CCcccHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 468999999999999999999999998888 9999987 56666554
No 141
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=96.84 E-value=0.00022 Score=53.57 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=38.0
Q ss_pred CCcccccccccccccCCCCcccccCCCCCCCCCCCceeEEeeCCCC-ceeEEe
Q 017586 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFT 350 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~~~~g-~~~~~~ 350 (369)
++|+|++|++...++++|..|+.+.+.++. |+|.+++| +|.+.+
T Consensus 64 ~~~dTlgGlil~~lg~iP~~Gd~v~~~g~~--------f~V~~~d~~RI~~V~ 108 (113)
T 3ded_A 64 GNIHTLAGVMLYQLGRVPSVTDRFEWNGFS--------FEVVDMDRTRVDKIL 108 (113)
T ss_dssp TCCCBHHHHHHHHHCSSCCTTCEEEETTEE--------EEEEEEETTEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCeEEEEE
Confidence 568999999999999999999999999888 99999975 444443
No 142
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=57.28 E-value=16 Score=24.76 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=20.8
Q ss_pred CcEeeEEcCCCcEEEEEehhHHHH
Q 017586 240 FLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 240 ~~~l~Vvd~~g~~~Givt~~Di~~ 263 (369)
.+.+-++|++|..+|+++..+-++
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~ 36 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALE 36 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHH
Confidence 345778999999999999999886
No 143
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=56.36 E-value=20 Score=24.25 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=25.7
Q ss_pred CcCEEEEEcCCCcEEEEEehhHHHHHHHhccCCC
Q 017586 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNL 38 (369)
Q Consensus 5 ~~~~~~V~d~~~~~~Givt~~di~~~~~~~~~~~ 38 (369)
+.+-+=+++++|..+|+++..+-++..-..++++
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LDL 45 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAARRNLDL 45 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHHHcCCCE
Confidence 3455888999999999999999886555554433
No 144
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=27.70 E-value=43 Score=24.72 Aligned_cols=16 Identities=38% Similarity=0.735 Sum_probs=13.7
Q ss_pred eeEEcCCCcEEEEEeh
Q 017586 243 LPVVDRDGDVVDVVDV 258 (369)
Q Consensus 243 l~Vvd~~g~~~Givt~ 258 (369)
.||.|++|+++|+|+.
T Consensus 106 ~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EeEECCCCCEEEEEEE
Confidence 5898878999999964
No 145
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=27.17 E-value=43 Score=25.20 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHH-cCCcEEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHhHhC
Q 017586 161 DTVLMATKKMLE-LRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238 (369)
Q Consensus 161 ~~l~~~~~~~~~-~~~~~~~V~~-~~~~~Givt~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~ 238 (369)
..+...++.+.+ .+...+.|+| +|..+ +..+= ..+..... .......+....++.....+... .
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~~---~~~~~--~~iG~~~~--~~~~~~al~G~~~~~~~~~~~g~-------~ 106 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLRY---SHPEA--QRIGQPFK--GDDILKALNGEENVAINRGFLAQ-------A 106 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBBS---CCSSG--GGTTSBCC--CGGGTGGGGTCCEEEEECSSSSC-------E
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcEE---ECCCh--HHCCCcCC--CCCHHHHhCCCeEEEEecCccEE-------E
Confidence 457777777664 5778888888 55321 11110 11111111 12333344333322222111100 0
Q ss_pred CCcEeeEEcCCCcEEEEEehhHHH
Q 017586 239 KFLHLPVVDRDGDVVDVVDVIHIT 262 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~~Di~ 262 (369)
=.-..||.|++|+++|+|+..--+
T Consensus 107 ~~~~~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 107 LRVFTPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEH
T ss_pred EEEEEeEEcCCCCEEEEEEEeEEH
Confidence 011359988789999999754443
No 146
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=25.53 E-value=36 Score=27.85 Aligned_cols=25 Identities=20% Similarity=0.157 Sum_probs=17.6
Q ss_pred CCcEeeEEcCCCcEEEEEehhHHHH
Q 017586 239 KFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~~Di~~ 263 (369)
+-..-||+|.+|+++||-|..|=..
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCccCCCCCcEEEEEeccCCcc
Confidence 5556799999999999998877543
No 147
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=24.84 E-value=75 Score=24.58 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=27.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCEEEEEeehHHHH
Q 017586 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 163 l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dll 196 (369)
+.+.++.+.+.+.+.+.|..+++++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 6666777778888888887799999999988753
No 148
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=24.30 E-value=69 Score=24.77 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCcEeeEeeCCeEEEEEehHHH
Q 017586 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 92 (369)
Q Consensus 60 l~ea~~~m~~~~~~~lpVvd~~~~vGiv~~~di 92 (369)
+.+.+..+.+.+-+-+.|..+++++|++.+.|-
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~ 153 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecC
Confidence 566677778889888888889999999987763
No 149
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=21.71 E-value=53 Score=25.61 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=17.9
Q ss_pred hCCCcEeeEEcCCCcEEEEEeh
Q 017586 237 DGKFLHLPVVDRDGDVVDVVDV 258 (369)
Q Consensus 237 ~~~~~~l~Vvd~~g~~~Givt~ 258 (369)
..+...-|++|.+|+++||.+.
T Consensus 123 ~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 123 QDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp SSCCTTCEEECTTSCEEEEEEE
T ss_pred CCCCchhhEEcCCCEEEEEEcc
Confidence 4455678999999999999863
No 150
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=20.50 E-value=55 Score=27.08 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=16.7
Q ss_pred CCcEeeEEcCCCcEEEEEeh
Q 017586 239 KFLHLPVVDRDGDVVDVVDV 258 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~ 258 (369)
+-..-|++|.+|+++||++.
T Consensus 187 G~SGGPLv~~~G~vVGI~s~ 206 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTL 206 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeE
Confidence 55567999989999999975
Done!