Query 017588
Match_columns 369
No_of_seqs 284 out of 2698
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017588.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017588hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 5.9E-65 2E-69 487.8 38.6 360 1-362 40-423 (426)
2 2qfp_A Purple acid phosphatase 100.0 6.2E-64 2.1E-68 480.6 37.5 366 1-368 34-422 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 1.1E-36 3.7E-41 296.9 34.5 348 2-359 23-478 (527)
4 3tgh_A Glideosome-associated p 100.0 3.3E-37 1.1E-41 284.0 22.4 252 80-363 2-309 (342)
5 1ute_A Protein (II purple acid 100.0 6.6E-33 2.2E-37 254.4 19.8 258 79-363 4-305 (313)
6 3ib7_A ICC protein; metallopho 99.9 1.9E-25 6.4E-30 206.5 21.7 239 79-349 23-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 4.2E-24 1.4E-28 192.1 21.2 231 82-346 1-255 (274)
8 2nxf_A Putative dimetal phosph 99.9 3.4E-24 1.2E-28 196.9 17.8 224 79-344 3-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.9 2.3E-20 8E-25 179.4 23.7 199 79-280 37-289 (443)
10 1uf3_A Hypothetical protein TT 99.7 1.2E-17 4.2E-22 145.5 13.8 187 80-299 4-206 (228)
11 2yvt_A Hypothetical protein AQ 99.7 1.3E-16 4.6E-21 141.9 12.0 183 81-274 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.7 2.9E-16 1E-20 145.2 10.4 235 79-347 16-281 (336)
13 2a22_A Vacuolar protein sortin 99.6 3.3E-14 1.1E-18 122.8 17.6 187 81-360 25-215 (215)
14 1z2w_A Vacuolar protein sortin 99.6 1.2E-13 4.3E-18 117.0 19.8 178 81-360 10-191 (192)
15 3av0_A DNA double-strand break 99.6 4.8E-14 1.6E-18 132.7 15.7 229 79-345 18-264 (386)
16 3rl5_A Metallophosphoesterase 99.5 4.1E-14 1.4E-18 126.6 12.8 205 79-303 57-278 (296)
17 1nnw_A Hypothetical protein; s 99.5 5E-14 1.7E-18 124.7 11.7 187 82-303 2-198 (252)
18 3qfm_A SAPH, putative uncharac 99.5 1.6E-13 5.4E-18 122.6 13.7 219 79-345 9-229 (270)
19 3tho_B Exonuclease, putative; 99.5 3.7E-13 1.3E-17 126.2 14.5 230 82-344 1-260 (379)
20 3ck2_A Conserved uncharacteriz 99.5 2.1E-12 7.3E-17 107.8 17.1 163 81-355 6-169 (176)
21 2kkn_A Uncharacterized protein 99.4 1.6E-11 5.4E-16 102.5 17.2 62 80-152 21-85 (178)
22 1xm7_A Hypothetical protein AQ 99.4 1.1E-12 3.7E-17 111.5 8.6 153 82-299 2-171 (195)
23 3rqz_A Metallophosphoesterase; 99.4 2.2E-12 7.6E-17 113.7 10.2 179 80-303 2-194 (246)
24 4fbw_A DNA repair protein RAD3 99.3 9.4E-11 3.2E-15 109.8 20.3 244 79-360 11-317 (417)
25 4fbk_A DNA repair and telomere 99.3 1.9E-10 6.6E-15 108.5 22.4 242 79-358 74-378 (472)
26 1s3l_A Hypothetical protein MJ 99.3 1.4E-11 4.8E-16 104.0 12.5 141 81-302 25-167 (190)
27 3t1i_A Double-strand break rep 99.3 5.2E-10 1.8E-14 105.2 23.5 241 79-358 30-334 (431)
28 1ii7_A MRE11 nuclease; RAD50, 99.3 1.4E-11 4.9E-16 113.5 12.2 72 82-153 1-88 (333)
29 1su1_A Hypothetical protein YF 99.1 1.3E-09 4.3E-14 93.3 14.5 71 81-153 25-101 (208)
30 1hp1_A 5'-nucleotidase; metall 98.9 3.4E-09 1.2E-13 103.3 11.6 186 79-278 6-233 (516)
31 2z1a_A 5'-nucleotidase; metal- 98.9 2.5E-09 8.4E-14 105.0 8.0 173 79-278 27-244 (552)
32 3qfk_A Uncharacterized protein 98.9 1.6E-08 5.6E-13 98.7 13.2 203 79-302 17-269 (527)
33 2wdc_A SOXB, sulfur oxidation 98.7 3.8E-08 1.3E-12 96.5 11.3 150 99-277 110-291 (562)
34 4h2g_A 5'-nucleotidase; dimer, 98.7 2.5E-08 8.6E-13 97.7 9.9 175 79-277 23-245 (546)
35 1g5b_A Serine/threonine protei 98.7 7.5E-09 2.6E-13 89.4 5.1 68 79-153 10-79 (221)
36 3ive_A Nucleotidase; structura 98.7 5.2E-08 1.8E-12 94.7 11.5 188 80-276 5-237 (509)
37 3ztv_A NAD nucleotidase, NADN; 98.7 5.2E-08 1.8E-12 96.1 11.0 174 80-277 11-231 (579)
38 2z06_A Putative uncharacterize 98.5 3.3E-06 1.1E-10 73.3 15.2 180 82-296 1-189 (252)
39 1t71_A Phosphatase, conserved 98.5 3.4E-06 1.2E-10 74.6 15.1 185 80-296 3-202 (281)
40 1t70_A Phosphatase; crystal, X 98.5 6.1E-06 2.1E-10 72.0 15.9 180 82-296 1-192 (255)
41 3c9f_A 5'-nucleotidase; 2',3'- 98.4 3.4E-06 1.2E-10 82.4 15.3 181 79-277 13-243 (557)
42 3gve_A YFKN protein; alpha-bet 98.4 9.9E-07 3.4E-11 80.9 10.8 42 80-121 10-69 (341)
43 3jyf_A 2',3'-cyclic nucleotide 98.1 1.7E-05 5.8E-10 72.6 11.7 74 80-154 7-106 (339)
44 4h1s_A 5'-nucleotidase; hydrol 98.1 3.1E-05 1.1E-09 75.5 13.3 170 81-277 3-223 (530)
45 2dfj_A Diadenosinetetraphospha 97.6 3.3E-05 1.1E-09 68.8 4.0 67 82-153 1-69 (280)
46 2qjc_A Diadenosine tetraphosph 97.6 3.8E-05 1.3E-09 67.8 3.8 66 81-153 18-85 (262)
47 2ie4_C PP2A-alpha;, serine/thr 97.3 0.00016 5.6E-09 65.0 5.0 70 81-153 49-121 (309)
48 2z72_A Protein-tyrosine-phosph 97.3 0.00038 1.3E-08 63.8 6.8 72 79-153 68-153 (342)
49 1fjm_A Protein serine/threonin 97.1 0.00054 1.8E-08 62.1 6.1 69 82-153 57-128 (330)
50 3e7a_A PP-1A, serine/threonine 97.0 0.00079 2.7E-08 60.0 6.1 68 83-153 57-127 (299)
51 3icf_A PPT, serine/threonine-p 97.0 0.0013 4.4E-08 59.5 7.5 72 79-153 61-136 (335)
52 3h63_A Serine/threonine-protei 97.0 0.00097 3.3E-08 59.9 6.4 71 80-153 58-132 (315)
53 3e0j_A DNA polymerase subunit 97.0 0.015 5E-07 55.0 14.6 138 79-219 198-378 (476)
54 3ll8_A Serine/threonine-protei 96.9 0.0012 4.1E-08 60.1 6.0 69 82-153 70-141 (357)
55 1wao_1 Serine/threonine protei 96.8 0.0018 6.3E-08 62.1 6.5 70 80-152 211-284 (477)
56 1aui_A Calcineurin, serine/thr 96.7 0.0014 4.9E-08 62.2 4.9 69 82-153 83-154 (521)
57 2haz_A N-CAM 1, neural cell ad 96.2 0.0074 2.5E-07 44.6 5.7 32 46-77 66-104 (105)
58 1x5l_A Ephrin type-A receptor 95.3 0.043 1.5E-06 40.5 6.5 33 46-78 66-105 (111)
59 2kbg_A N-CAM 2, neural cell ad 95.2 0.014 4.6E-07 44.1 3.6 68 1-78 24-102 (114)
60 2edd_A Netrin receptor DCC; tu 95.1 0.065 2.2E-06 40.8 7.3 33 46-78 78-117 (123)
61 2ede_A Netrin receptor DCC; tu 95.0 0.061 2.1E-06 39.8 6.6 34 45-78 68-108 (114)
62 2dm4_A Sortilin-related recept 94.8 0.092 3.2E-06 38.5 7.2 31 47-77 64-101 (108)
63 2djs_A Ephrin type-B receptor 94.8 0.056 1.9E-06 39.7 5.9 33 46-78 63-102 (108)
64 1x5x_A Fibronectin type-III do 94.8 0.056 1.9E-06 39.8 5.9 32 47-78 65-103 (109)
65 1x5f_A Neogenin; RGM binding, 94.5 0.086 2.9E-06 39.4 6.4 34 45-78 74-114 (120)
66 1x4y_A Biregional cell adhesio 94.4 0.088 3E-06 39.2 6.3 33 46-78 69-108 (114)
67 1x4x_A Fibronectin type-III do 94.4 0.064 2.2E-06 39.4 5.3 32 47-78 62-100 (106)
68 2ed7_A Netrin receptor DCC; tu 94.1 0.11 3.6E-06 38.8 6.2 34 45-78 73-113 (119)
69 2e3v_A Neural cell adhesion mo 94.1 0.079 2.7E-06 40.1 5.5 33 46-78 67-106 (122)
70 2rb8_A Tenascin; beta sheet,lo 94.1 0.14 4.9E-06 37.4 6.7 33 46-78 56-94 (104)
71 2ic2_A CG9211-PA, GH03927P; IH 94.1 0.18 6.2E-06 37.7 7.4 21 45-65 70-90 (115)
72 3b83_A Ten-D3; beta sheet, com 94.0 0.16 5.5E-06 36.8 6.9 55 1-65 18-74 (100)
73 2dju_A Receptor-type tyrosine- 93.9 0.079 2.7E-06 38.5 4.9 32 47-78 62-100 (106)
74 1ujt_A KIAA1568 protein; fibro 93.7 0.13 4.4E-06 39.0 5.9 68 1-77 32-113 (120)
75 1x5a_A Ephrin type-A receptor 93.6 0.066 2.3E-06 39.5 4.1 31 48-78 64-101 (107)
76 2crz_A Fibronectin type-III do 93.5 0.09 3.1E-06 38.8 4.8 33 46-78 65-104 (110)
77 2dle_A Receptor-type tyrosine- 93.5 0.12 4E-06 38.1 5.3 33 46-78 59-97 (104)
78 1x5g_A Neogenin; RGM binding, 93.5 0.09 3.1E-06 39.0 4.7 33 46-78 71-110 (116)
79 2edy_A Receptor-type tyrosine- 93.4 0.044 1.5E-06 39.8 2.7 31 47-77 65-102 (103)
80 2cuh_A Tenascin-X; fibronectin 93.1 0.081 2.8E-06 39.5 3.8 33 46-78 59-97 (115)
81 2ed8_A Netrin receptor DCC; tu 93.0 0.15 5.2E-06 37.1 5.3 32 46-77 61-99 (106)
82 2ee2_A Contactin-1; neural cel 92.9 0.14 4.9E-06 38.2 5.1 33 46-78 74-113 (119)
83 2db8_A Tripartite motif protei 92.9 0.045 1.5E-06 40.7 2.1 32 47-78 66-104 (110)
84 1x5z_A Receptor-type tyrosine- 92.6 0.087 3E-06 39.0 3.4 33 46-78 70-109 (115)
85 3tes_A Tencon; fibronectin typ 92.5 0.23 7.9E-06 35.8 5.5 20 46-65 55-74 (98)
86 2vkw_A Neural cell adhesion mo 92.4 0.19 6.5E-06 41.5 5.8 32 46-77 68-106 (209)
87 3teu_A Fibcon; FN3 domain, fib 92.4 0.27 9.2E-06 35.2 5.8 55 1-65 18-74 (98)
88 1wfo_A Sidekick 2; FN3, cell a 92.4 0.097 3.3E-06 39.8 3.5 34 45-78 84-124 (130)
89 2dkm_A Collagen alpha-1(XX) ch 92.2 0.16 5.4E-06 37.1 4.4 19 47-65 62-80 (104)
90 1wk0_A KIAA0970 protein; fibro 92.2 0.065 2.2E-06 41.8 2.3 33 46-78 82-121 (137)
91 1x4z_A Biregional cell adhesio 92.1 0.16 5.3E-06 38.2 4.4 21 45-65 75-95 (121)
92 1bpv_A Titin, A71, connectin; 92.1 0.1 3.5E-06 38.9 3.2 56 1-66 27-88 (112)
93 2ed9_A Netrin receptor DCC; tu 91.9 0.17 5.7E-06 38.0 4.4 32 46-77 85-123 (124)
94 2cum_A Tenascin-X; hexabrachio 91.8 0.42 1.4E-05 34.9 6.4 33 45-77 58-96 (105)
95 2e7h_A Ephrin type-B receptor 91.8 0.095 3.2E-06 38.6 2.8 32 47-78 65-103 (109)
96 2h41_A Fibronectin; beta sandw 91.8 0.2 6.9E-06 36.2 4.4 55 1-65 22-78 (95)
97 2yuw_A Myosin binding protein 91.7 0.21 7.1E-06 36.7 4.5 20 46-65 65-84 (110)
98 3n1f_C Cell adhesion molecule- 91.6 0.36 1.2E-05 35.1 5.8 29 47-75 66-101 (102)
99 1qr4_A Protein (tenascin); fib 91.6 0.29 1E-05 39.5 5.9 32 46-77 147-184 (186)
100 1wfu_A Unnamed protein product 91.6 0.14 4.7E-06 38.9 3.5 32 47-78 76-114 (120)
101 2edx_A Protein tyrosine phosph 91.5 0.32 1.1E-05 36.9 5.7 34 45-78 78-118 (134)
102 3flo_A DNA polymerase alpha su 91.3 0.31 1E-05 45.8 6.1 74 80-153 146-247 (460)
103 3qht_C Monobody YSMB-1; fibron 91.2 0.29 1E-05 35.1 4.8 21 45-65 57-77 (97)
104 2ocf_D Fibronectin; estrogen r 91.2 0.4 1.4E-05 36.2 5.8 20 46-65 82-101 (121)
105 2ee3_A Collagen alpha-1(XX) ch 91.2 0.24 8.2E-06 36.6 4.4 66 1-77 24-97 (108)
106 1va9_A DOWN syndrome cell adhe 91.2 0.28 9.5E-06 36.5 4.9 34 44-77 76-116 (122)
107 3qwq_B Adnectin; cell surface 91.2 0.44 1.5E-05 35.5 6.0 55 1-65 20-76 (114)
108 1i1r_A GP130, interleukin-6 re 91.0 0.29 9.8E-06 43.2 5.5 32 46-77 260-301 (303)
109 3k2m_C Monobody HA4; engineere 90.9 0.41 1.4E-05 34.6 5.4 20 46-65 60-79 (101)
110 2cui_A Tenascin-X; fibronectin 90.9 0.3 1E-05 36.4 4.7 20 46-65 70-89 (112)
111 1x5j_A Neogenin; RGM binding, 90.8 0.1 3.5E-06 38.9 2.0 32 46-77 68-106 (113)
112 2ibg_A CG9211-PA, GH03927P; IH 90.7 0.6 2.1E-05 38.5 7.1 31 47-77 175-212 (214)
113 2dn7_A Receptor-type tyrosine- 90.6 0.42 1.5E-05 34.6 5.3 20 46-65 62-81 (107)
114 1x5y_A Myosin binding protein 90.5 0.19 6.6E-06 37.0 3.4 20 46-65 66-85 (111)
115 3mpc_A FN3-like protein; fibro 90.5 0.34 1.2E-05 35.5 4.6 17 49-65 60-76 (103)
116 1wis_A KIAA1514 protein; FNIII 90.5 0.32 1.1E-05 36.6 4.7 20 46-65 79-98 (124)
117 1bqu_A Protein (GP130); cytoki 90.3 0.3 1E-05 40.4 4.8 32 46-77 164-205 (215)
118 1oww_A FN, fibronectin first t 90.1 0.31 1.1E-05 34.5 3.8 63 3-75 25-96 (98)
119 1q38_A Fibronectin; amyloid fi 90.0 0.079 2.7E-06 36.3 0.7 64 3-77 2-75 (89)
120 1v5j_A KIAA1355 protein, RSGI 90.0 0.32 1.1E-05 36.0 4.2 66 2-77 24-101 (108)
121 2yux_A Myosin-binding protein 89.6 0.34 1.2E-05 36.2 4.2 20 47-66 75-94 (120)
122 1cd9_B G-CSF-R, protein (G-CSF 89.4 0.71 2.4E-05 38.2 6.4 33 45-77 171-213 (215)
123 2dmk_A Midline 2 isoform 2; mi 89.3 0.25 8.5E-06 37.6 3.2 31 47-77 81-117 (127)
124 3t04_D Monobody 7C12; engineer 89.2 0.34 1.2E-05 35.3 3.7 21 45-65 63-83 (103)
125 2qbw_A PDZ-fibronectin fusion 89.2 0.43 1.5E-05 39.3 4.8 20 46-65 157-176 (195)
126 2yrz_A Integrin beta-4; GP150, 89.1 0.31 1.1E-05 36.1 3.6 21 45-65 72-92 (118)
127 1uc6_A CNTF receptor, ciliary 88.9 0.96 3.3E-05 33.1 6.2 20 47-66 68-87 (109)
128 1x3d_A Fibronectin type-III do 88.9 0.4 1.4E-05 35.5 4.0 32 47-78 74-112 (118)
129 3mtr_A N-CAM-1, NCAM-1, neural 88.8 0.63 2.2E-05 38.4 5.7 33 46-78 173-212 (215)
130 3n06_B PRL-R, prolactin recept 88.8 1.2 4.1E-05 36.6 7.5 31 47-77 166-204 (210)
131 3p4l_A Neogenin; iron homeosta 88.7 0.85 2.9E-05 37.5 6.4 32 46-77 64-102 (211)
132 1k85_A Chitinase A1; fibronect 88.6 0.43 1.5E-05 33.3 3.9 19 47-65 52-70 (88)
133 2b5i_B Interleukin-2 receptor 88.3 0.93 3.2E-05 38.0 6.4 34 45-78 164-208 (214)
134 3f7q_A Integrin beta-4, GP150; 88.1 1.3 4.4E-05 37.2 7.2 31 47-77 59-96 (234)
135 1qr4_A Protein (tenascin); fib 88.0 0.6 2.1E-05 37.6 4.9 38 47-84 59-103 (186)
136 2gee_A Hypothetical protein; f 87.9 1.3 4.3E-05 36.4 6.9 20 46-65 77-96 (203)
137 1wf5_A Sidekick 2 protein; FNI 87.9 0.59 2E-05 34.7 4.5 21 45-65 75-95 (121)
138 1tdq_A Tenascin-R; extracellul 87.9 2.4 8.2E-05 36.5 9.1 21 45-65 159-179 (283)
139 2dlh_A Receptor-type tyrosine- 87.5 0.42 1.4E-05 35.5 3.4 33 46-78 76-115 (121)
140 2d9q_B Granulocyte colony-stim 87.2 1.1 3.7E-05 39.6 6.5 67 1-77 225-307 (313)
141 3lpw_A A77-A78 domain from tit 86.7 1.2 4E-05 35.9 6.0 19 47-65 159-177 (197)
142 3r8q_A Fibronectin; heparin, F 86.6 1.7 5.8E-05 37.7 7.4 43 46-88 165-214 (290)
143 2crm_A Fibronectin type-III do 86.6 0.3 1E-05 36.4 2.1 31 47-77 76-113 (120)
144 3p4l_A Neogenin; iron homeosta 86.6 1.2 4.1E-05 36.6 6.0 32 46-77 166-204 (211)
145 1uen_A KIAA0343 protein; immun 86.3 0.54 1.8E-05 35.1 3.4 33 46-78 80-119 (125)
146 1tdq_A Tenascin-R; extracellul 85.8 2.2 7.4E-05 36.7 7.6 44 45-88 67-117 (283)
147 1j8k_A Fibronectin; EDA, TYPEI 85.8 1.1 3.7E-05 31.6 4.7 22 45-66 54-75 (94)
148 1eer_B Epobp, erythropoietin r 85.6 2.3 7.8E-05 35.6 7.4 31 46-76 180-222 (227)
149 2gee_A Hypothetical protein; f 85.5 1.3 4.5E-05 36.3 5.7 21 45-65 167-187 (203)
150 2dbj_A Proto-oncogene tyrosine 85.5 0.66 2.3E-05 34.8 3.6 33 46-78 79-118 (124)
151 2ha1_A Fibronectin; beta sandw 85.5 1.3 4.5E-05 36.0 5.7 55 1-65 18-75 (201)
152 1x5h_A Neogenin; RGM binding, 85.4 0.55 1.9E-05 35.5 3.1 34 44-77 75-115 (132)
153 3fl7_A Ephrin receptor; ATP-bi 84.4 1.4 4.9E-05 42.5 6.1 32 47-78 496-534 (536)
154 1wfn_A Sidekick 2; FN3, cell a 83.9 0.68 2.3E-05 34.3 2.9 21 45-65 73-93 (119)
155 3r8q_A Fibronectin; heparin, F 83.7 3.2 0.00011 35.9 7.7 21 45-65 73-93 (290)
156 3lpw_A A77-A78 domain from tit 83.2 2 6.9E-05 34.4 5.9 19 47-65 63-81 (197)
157 2jll_A NCAM2, neural cell adhe 83.2 1.3 4.5E-05 40.1 5.2 33 46-78 349-387 (389)
158 1uey_A KIAA0343 protein; immun 83.1 1.6 5.3E-05 32.7 4.8 28 50-77 78-113 (127)
159 1cfb_A Drosophila neuroglian; 82.6 2.4 8E-05 34.6 6.1 21 45-65 163-183 (205)
160 3up1_A Interleukin-7 receptor 82.6 3.7 0.00013 34.6 7.3 33 46-78 172-215 (223)
161 3l5i_A Interleukin-6 receptor 81.6 1 3.5E-05 39.0 3.7 32 46-77 253-290 (290)
162 2vkw_A Neural cell adhesion mo 81.6 2.1 7.3E-05 35.0 5.5 20 46-65 165-184 (209)
163 1uem_A KIAA1568 protein; immun 81.3 0.94 3.2E-05 33.3 2.8 19 47-65 73-91 (117)
164 2ha1_A Fibronectin; beta sandw 81.1 1.6 5.3E-05 35.6 4.4 21 45-65 164-184 (201)
165 2ibg_A CG9211-PA, GH03927P; IH 80.6 2.5 8.5E-05 34.6 5.6 22 44-65 68-89 (214)
166 2w1n_A O-GLCNACASE NAGJ; hexos 80.2 2.8 9.7E-05 35.0 5.5 18 48-65 202-219 (238)
167 1cfb_A Drosophila neuroglian; 79.9 2.2 7.7E-05 34.7 5.0 29 48-77 65-101 (205)
168 1fnf_A Fibronectin; RGD, extra 79.1 4.8 0.00017 36.0 7.5 20 46-65 239-258 (368)
169 1axi_B HGHBP, growth hormone r 78.2 1.2 4E-05 37.9 2.7 31 46-76 195-234 (236)
170 3t1w_A Four-domain fibronectin 77.5 4.7 0.00016 36.2 6.9 20 46-65 331-350 (375)
171 3t1w_A Four-domain fibronectin 77.3 3.7 0.00013 36.9 6.1 56 1-65 20-78 (375)
172 3tgx_A Interleukin-21 receptor 75.9 4.4 0.00015 33.8 5.7 36 43-78 161-209 (219)
173 1fnf_A Fibronectin; RGD, extra 75.8 3.2 0.00011 37.2 5.2 56 1-65 19-77 (368)
174 3csg_A MBP, maltose-binding pr 74.7 1.9 6.4E-05 40.6 3.4 20 46-65 424-443 (461)
175 2q7n_A Leukemia inhibitory fac 73.5 1.7 6E-05 41.3 2.8 34 44-77 444-486 (488)
176 3l5i_A Interleukin-6 receptor 73.0 4.4 0.00015 34.9 5.2 21 45-65 156-176 (290)
177 3e0g_A Leukemia inhibitory fac 72.4 2.3 8E-05 40.4 3.4 70 1-77 398-481 (483)
178 1n26_A IL-6 receptor alpha cha 72.2 4.7 0.00016 35.7 5.3 20 46-65 256-275 (325)
179 2edb_A Netrin receptor DCC; tu 72.0 2 6.7E-05 31.7 2.3 20 46-65 71-90 (116)
180 2ekj_A Collagen alpha-1(XX) ch 70.8 1.1 3.6E-05 32.6 0.5 21 46-66 61-81 (105)
181 1iar_B Protein (interleukin-4 70.2 6.9 0.00024 32.2 5.6 36 43-78 156-201 (207)
182 4go6_B HCF C-terminal chain 1; 70.2 3.5 0.00012 34.7 3.7 31 47-77 47-84 (232)
183 3uto_A Twitchin; kinase, muscl 69.0 5.5 0.00019 38.7 5.3 53 1-65 26-84 (573)
184 3l5h_A Interleukin-6 receptor 67.3 1.9 6.6E-05 41.7 1.7 33 45-77 258-300 (589)
185 1x5i_A Neogenin; RGM binding, 66.5 2.3 7.7E-05 31.9 1.6 22 44-65 79-100 (126)
186 3v6o_A Leptin receptor; recept 66.2 5.5 0.00019 32.7 4.1 20 46-65 167-186 (206)
187 2gys_A Cytokine receptor commo 65.1 24 0.00082 32.3 8.7 45 45-89 170-229 (419)
188 3f7q_A Integrin beta-4, GP150; 64.5 3.4 0.00012 34.5 2.5 20 46-65 160-179 (234)
189 1zlg_A Anosmin 1; insulin-like 64.3 17 0.00059 35.9 8.0 35 44-78 592-632 (680)
190 2jll_A NCAM2, neural cell adhe 62.5 20 0.0007 31.9 7.6 32 46-77 252-290 (389)
191 1zlg_A Anosmin 1; insulin-like 62.0 17 0.00059 35.9 7.5 22 44-65 332-353 (680)
192 2erj_C Cytokine receptor commo 61.6 15 0.00053 31.1 6.2 52 2-65 154-208 (247)
193 3lqm_A Interleukin-10 receptor 60.1 8.1 0.00028 31.5 4.0 32 47-78 156-196 (201)
194 3bpo_C Interleukin-13 receptor 58.7 14 0.00048 32.3 5.6 22 44-65 265-286 (314)
195 4doh_B Interleukin-20 receptor 58.3 9.3 0.00032 31.4 4.1 19 47-65 161-179 (206)
196 3s98_A Interferon alpha/beta r 58.0 19 0.00065 31.5 6.4 30 47-76 160-198 (306)
197 2b5i_C Cytokine receptor commo 57.9 12 0.00042 30.3 4.8 52 2-65 116-170 (199)
198 3w01_A Heptaprenylglyceryl pho 56.3 51 0.0018 27.7 8.3 66 81-152 11-76 (235)
199 4doh_R Interleukin-20 receptor 53.8 12 0.00041 31.1 4.1 33 46-78 173-214 (221)
200 3se4_A Interferon alpha/beta r 52.2 22 0.00074 32.6 5.9 19 47-65 164-182 (414)
201 2v5y_A Receptor-type tyrosine- 49.8 12 0.00043 37.1 4.1 33 45-77 421-459 (731)
202 3fl7_A Ephrin receptor; ATP-bi 48.9 13 0.00046 35.6 4.0 21 45-65 399-419 (536)
203 3l5h_A Interleukin-6 receptor 48.6 14 0.00049 35.4 4.2 21 45-65 455-475 (589)
204 1wj3_A KIAA1496 protein; beta 45.7 13 0.00043 27.3 2.6 31 47-78 74-111 (117)
205 3vzx_A Heptaprenylglyceryl pho 45.5 54 0.0018 27.5 6.7 66 81-152 6-71 (228)
206 4go6_B HCF C-terminal chain 1; 42.0 43 0.0015 27.7 5.8 16 50-65 167-182 (232)
207 2fyw_A Conserved hypothetical 40.8 39 0.0013 29.0 5.4 42 229-274 62-103 (267)
208 2uvf_A Exopolygalacturonase; G 40.8 28 0.00097 34.0 4.9 35 45-79 112-154 (608)
209 2nzi_A Titin; IG-domain, FNIII 39.9 48 0.0016 28.1 6.0 20 46-65 254-273 (305)
210 2d1p_A TUSD, hypothetical UPF0 36.7 1.3E+02 0.0043 22.9 7.2 81 188-272 9-92 (140)
211 1bqu_A Protein (GP130); cytoki 34.7 24 0.00081 28.5 2.9 20 46-65 62-82 (215)
212 2yyb_A Hypothetical protein TT 31.7 58 0.002 27.5 4.9 41 229-275 60-100 (242)
213 1i1r_A GP130, interleukin-6 re 31.4 49 0.0017 28.4 4.6 20 46-65 158-178 (303)
214 2dtg_E Insulin receptor; IR ec 30.9 25 0.00087 36.0 2.9 32 46-77 549-592 (897)
215 2f6u_A GGGPS, (S)-3-O-geranylg 29.3 1.9E+02 0.0066 24.1 7.6 65 80-151 7-72 (234)
216 3s9d_B Interferon alpha/beta r 28.7 42 0.0014 27.4 3.4 22 44-65 158-179 (199)
217 2gys_A Cytokine receptor commo 28.4 20 0.00067 32.9 1.5 20 46-65 377-396 (419)
218 2gx8_A NIF3-related protein; s 26.3 69 0.0024 29.3 4.7 42 229-274 88-129 (397)
219 2nyd_A UPF0135 protein SA1388; 26.2 68 0.0023 29.1 4.5 41 229-274 64-104 (370)
220 1viz_A PCRB protein homolog; s 24.9 2E+02 0.0069 24.1 7.0 64 80-150 7-71 (240)
221 1nmo_A Hypothetical protein YB 22.6 1E+02 0.0035 26.0 4.8 40 229-274 59-99 (247)
222 2mcm_A Macromomycin; apoprotei 21.9 70 0.0024 23.3 3.0 25 41-65 13-37 (112)
223 1noa_A Neocarzinostatin; antib 21.1 70 0.0024 23.4 2.8 25 41-65 14-38 (113)
224 2hy5_A Putative sulfurtransfer 20.3 2.6E+02 0.0089 20.5 6.5 62 209-273 20-81 (130)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=5.9e-65 Score=487.83 Aligned_cols=360 Identities=43% Similarity=0.762 Sum_probs=304.7
Q ss_pred CEEEEEeC-C-CCCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC-CCCeeEEECCC
Q 017588 1 MRLSWITE-N-SSPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD-SAQERSFKTPP 77 (369)
Q Consensus 1 m~v~W~t~-~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~-~s~~~~F~t~~ 77 (369)
|+|+|.|. . ++.+.|+|+++++.+...+.++.++|.+.....+++|+|+|+||+|+|+|+|||+.+ +|+.++|+|+|
T Consensus 40 ~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p 119 (426)
T 1xzw_A 40 VIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (426)
T ss_dssp EEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCEEEEEECCCCccceeEEECCC
Confidence 79999999 5 489999999998888888888776666544567899999999999999999999865 68899999998
Q ss_pred C---CCCeEEEEEeeCCCCCCcHHHHHHHHhc--CCCeEEeccccCCCCCC----hHHHHHHHHhhHhhhcCCcEEEccC
Q 017588 78 A---QLPIKFAIVGDLGQTGWTNSTLQHVAKS--NYDMLLLPGDLSYADLD----QPLWDSFGRMVEPLASQRPWMVTQG 148 (369)
Q Consensus 78 ~---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vl~~GD~~~~~~~----~~~~~~~~~~~~~l~~~~P~~~v~G 148 (369)
. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.|.+.++++...+|+++++|
T Consensus 120 ~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~G 199 (426)
T 1xzw_A 120 KPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAG 199 (426)
T ss_dssp CCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCC
T ss_pred CCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecc
Confidence 5 5789999999998765456677777765 89999999999997654 4679989888998888899999999
Q ss_pred CCCCCCCCcc-ccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCe
Q 017588 149 NHEIEKLPII-HSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPW 227 (369)
Q Consensus 149 NHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~ 227 (369)
|||+...+.. ....+..|..+|.+|.+..+...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++.+|
T Consensus 200 NHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 279 (426)
T 1xzw_A 200 NHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPW 279 (426)
T ss_dssp GGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCE
T ss_pred ccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCE
Confidence 9999643210 123566778888888765555567899999999999999998877778999999999999986557889
Q ss_pred EEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCc-----------cCCCCceEEE
Q 017588 228 IVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGK-----------PDNCGPVHIT 296 (369)
Q Consensus 228 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~-----------~~~~g~~~i~ 296 (369)
+||++|+|+++....+..... .+++.|++++++++|+++|+||+|.++|..|++++. .+++|++||+
T Consensus 280 ~Iv~~H~P~~~~~~~~~~~~~--~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~ 357 (426)
T 1xzw_A 280 LIVLVHAPLYNSYEAHYMEGE--AMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYIT 357 (426)
T ss_dssp EEEECSSCSSCCBSTTTTTTH--HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEE
T ss_pred EEEEeccCceeCCCcccCCCH--HHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEE
Confidence 999999999987654333332 578999999999999999999999999999987654 2468999999
Q ss_pred ECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEEeCCCCCeeeEEEEEEecC
Q 017588 297 IGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHRNDDDKPIASDSIWLRSLT 362 (369)
Q Consensus 297 ~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~ 362 (369)
+|+||+.+++...+..++|+|++|+...+||++|++.|++++.|+|+++.+|++++.|+|||.|+.
T Consensus 358 ~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 358 IGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp ECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred eCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 999999876654666788999999999999999999999999999999999998899999999974
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=6.2e-64 Score=480.64 Aligned_cols=366 Identities=42% Similarity=0.749 Sum_probs=304.6
Q ss_pred CEEEEEeCC-CCCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC-CCCeeEEECCCC
Q 017588 1 MRLSWITEN-SSPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD-SAQERSFKTPPA 78 (369)
Q Consensus 1 m~v~W~t~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~-~s~~~~F~t~~~ 78 (369)
|+|+|.|.. ++.+.|+||++++.+...+.++.++|......++++|+|+|+||+|+|+|+|||+.+ +|+.++|+|+|.
T Consensus 34 ~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~ 113 (424)
T 2qfp_A 34 MIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQ 113 (424)
T ss_dssp EEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEEEEEECCSSSCEEEEEECCCC
T ss_pred EEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEEEEEECCCCccceEEEECCCC
Confidence 799999977 579999999998878888888766665433567899999999999999999999976 688999999985
Q ss_pred ---CCCeEEEEEeeCCCCCCcHHHHHHHHhc--CCCeEEeccccCCCCCC----hHHHHHHHHhhHhhhcCCcEEEccCC
Q 017588 79 ---QLPIKFAIVGDLGQTGWTNSTLQHVAKS--NYDMLLLPGDLSYADLD----QPLWDSFGRMVEPLASQRPWMVTQGN 149 (369)
Q Consensus 79 ---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vl~~GD~~~~~~~----~~~~~~~~~~~~~l~~~~P~~~v~GN 149 (369)
..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.|.+.++++...+|+++++||
T Consensus 114 ~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GN 193 (424)
T 2qfp_A 114 TGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGN 193 (424)
T ss_dssp CCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCH
T ss_pred CCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCC
Confidence 4689999999999765445567777654 89999999999997543 45788888888888878999999999
Q ss_pred CCCCCCCcc-ccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeE
Q 017588 150 HEIEKLPII-HSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWI 228 (369)
Q Consensus 150 HD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~ 228 (369)
||+...+.. ....+..|..+|.+|........+.||+|++|+++||+||+...++...+|++||+++|+++++++.+|+
T Consensus 194 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 273 (424)
T 2qfp_A 194 HEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 273 (424)
T ss_dssp HHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEE
T ss_pred cccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEE
Confidence 999643211 1124566777888887654445678999999999999999987776678999999999999866567899
Q ss_pred EEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCc-----------cCCCCceEEEE
Q 017588 229 VVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGK-----------PDNCGPVHITI 297 (369)
Q Consensus 229 iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~-----------~~~~g~~~i~~ 297 (369)
||++|+|+++....+..... .+++.|++++++++|+++|+||+|.|+|..|+++.. .++++++||++
T Consensus 274 Iv~~H~P~~~~~~~~~~~~~--~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~ 351 (424)
T 2qfp_A 274 IVLMHSPLYNSYNHHFMEGE--AMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITI 351 (424)
T ss_dssp EEECSSCSSCCBSTTTTTTH--HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEE
T ss_pred EEEeCcCceecCcccccccH--HHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEe
Confidence 99999999986543322222 578899999999999999999999999999876532 24679999999
Q ss_pred CCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEEeCCCCCeeeEEEEEEecCCCCCCC
Q 017588 298 GDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHRNDDDKPIASDSIWLRSLTSDPTCK 368 (369)
Q Consensus 298 G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 368 (369)
|+||+.+++...+..++|+|++|+...+||++|++.|++++.|+|+++.+|++++.|+|||.|+...|.|.
T Consensus 352 G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~~ 422 (424)
T 2qfp_A 352 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDD 422 (424)
T ss_dssp CCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCCCCC
T ss_pred cCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecccccccc
Confidence 99999887655566788999999999999999999999999999999999997678999999999888885
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-36 Score=296.87 Aligned_cols=348 Identities=20% Similarity=0.248 Sum_probs=228.4
Q ss_pred EEEEEeCCC----------CCCEEEEeccCCCC--CceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC--C
Q 017588 2 RLSWITENS----------SPATVKYGTSPGVY--DNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD--S 67 (369)
Q Consensus 2 ~v~W~t~~~----------~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~--~ 67 (369)
.|.|....+ ....|+|..+.+.. .....++... .....++|+|.|+||+|+|.|+||+..+ .
T Consensus 23 vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a----~~~~~~t~~v~v~gL~P~t~Y~Yr~~~~~~~ 98 (527)
T 2yeq_A 23 VVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMA----KPSLAHSVHVEADGLEPNKVYYYRFKTGHEL 98 (527)
T ss_dssp EEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEE----CGGGTTEEEEEECSCCTTCEEEEEEEETTEE
T ss_pred EEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEe----cCCCceEEEeecCCcCCCCEEEEEEEeCCCc
Confidence 588998864 24567766554332 2333443321 1357899999999999999999999875 5
Q ss_pred CCeeEEECCCC----CCCeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCCh-------------------
Q 017588 68 AQERSFKTPPA----QLPIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQ------------------- 124 (369)
Q Consensus 68 s~~~~F~t~~~----~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~------------------- 124 (369)
|+.++|+|+|. ..+++|+++||.+.......++..|.+.+|||||++||++|.+...
T Consensus 99 S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~t 178 (527)
T 2yeq_A 99 SPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIIT 178 (527)
T ss_dssp CCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCS
T ss_pred CCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccccccCCcccccC
Confidence 88999999987 2689999999998643344677888888999999999999986431
Q ss_pred -----HHHHHHH--HhhHhhhcCCcEEEccCCCCCCCCCccc-ccc------c-----ccccccc-ccCcCC----CCCC
Q 017588 125 -----PLWDSFG--RMVEPLASQRPWMVTQGNHEIEKLPIIH-STK------F-----TSYNARW-RMPFEE----SGSN 180 (369)
Q Consensus 125 -----~~~~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~-~~~------~-----~~~~~~~-~~p~~~----~~~~ 180 (369)
..|..+. ..++.+.+.+|+++++||||+.++-... .+. | ..++.+| .||... .+..
T Consensus 179 l~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~ 258 (527)
T 2yeq_A 179 LQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPD 258 (527)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTB
T ss_pred HHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCC
Confidence 1122221 2356677789999999999996432100 000 0 1122222 244321 1123
Q ss_pred CceeEEEEeCc-EEEEEecCCCCCC----------------------CChhHHHHHHHHhccccCCCCCeEEEEeccCcc
Q 017588 181 SNLYYSFDAAG-VHVVMLGSYTDFD----------------------QNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWY 237 (369)
Q Consensus 181 ~~~~ys~~~g~-~~~i~lds~~~~~----------------------~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~ 237 (369)
...||+|++|+ ++||+||++.... .+.+|++||++.|+++ +++|+||++|+|++
T Consensus 259 ~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---~a~W~Iv~s~~p~~ 335 (527)
T 2yeq_A 259 MQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAHWNVLAQQIFFA 335 (527)
T ss_dssp CCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---CSSEEEEECSSCCS
T ss_pred ceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---CCCeEEEEeCCccc
Confidence 46899999999 9999999964211 3689999999999985 46899999999998
Q ss_pred ccCCCC--------CCCcchHHHHHHHHHHHHhcCce--EEEecccccceeeeeccCCccCCC----CceEEEECC--CC
Q 017588 238 NTNTAH--------QGEVESEGMRKAMEGLIHQARVG--VVFAGHVHAYERFTRVSNGKPDNC----GPVHITIGD--GG 301 (369)
Q Consensus 238 ~~~~~~--------~~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~~~r~~~~~~~~~~~~----g~~~i~~G~--gG 301 (369)
...... ..+......|+.|.++|++++|+ ++|+||+|.+++.....+. .++. ++.+++++. +|
T Consensus 336 ~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~-~~p~~~~~~~ef~~ssi~s~~ 414 (527)
T 2yeq_A 336 KWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF-EKTSSKIFGAEFVGTSITSGG 414 (527)
T ss_dssp CCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST-TCTTSCEEEEEEECCCSSTTC
T ss_pred ccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc-cCCCCCceEEEEEcCCeeCCC
Confidence 653211 11122356799999999999984 9999999999998643221 1222 344443332 11
Q ss_pred CCCCcc---ccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEEeCC-----CCCeeeEEEEEE
Q 017588 302 NREGLA---SRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHRNDD-----DKPIASDSIWLR 359 (369)
Q Consensus 302 ~~~~~~---~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~-----g~~~~~d~~~~~ 359 (369)
...... ..+...+|. ..|.+...||.+|+|. .+.++.+|+...+ +.....-+|.+.
T Consensus 415 ~g~~~~~~~~~~~~~np~-~~~~~~~~Gy~~v~vt-~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~ 478 (527)
T 2yeq_A 415 NGADKRADTDQILKENPH-IQFFNDYRGYVRCTVT-PHQWKADYRVMPFVTEPGAAISTRASFVYQ 478 (527)
T ss_dssp SCBSBCTTHHHHHHHCTT-EEEEEBCEEEEEEEEE-TTEEEEEEEEESCSSSSCCCCEEEEEEEEC
T ss_pred CcccchhhhhhhhhcCCc-ceeeeCCCCEEEEEEe-ccEEEEEEEEeCCccCCCCcceeeeEEEEe
Confidence 111000 011123444 3455578899999994 5678888876553 443344455553
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.3e-37 Score=284.04 Aligned_cols=252 Identities=16% Similarity=0.258 Sum_probs=184.6
Q ss_pred CCeEEEEEeeCCCCCCcHHH-----HHHHHhcCCCeEEeccccCCCCCC---hHHHHH-HHHhhHhh--hcCCcEEEccC
Q 017588 80 LPIKFAIVGDLGQTGWTNST-----LQHVAKSNYDMLLLPGDLSYADLD---QPLWDS-FGRMVEPL--ASQRPWMVTQG 148 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~~~~-----~~~i~~~~~d~vl~~GD~~~~~~~---~~~~~~-~~~~~~~l--~~~~P~~~v~G 148 (369)
.+++|+++||+|.+...+.. .+.+++.+|||||++||++|.+.. ...|.. |...+..+ ...+|++.++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 57999999999976543322 223346899999999999998432 445654 33333332 23699999999
Q ss_pred CCCCCCCCccccc------------------cccccccccccCcCCCCCCCceeEEE----Ee---------C----cEE
Q 017588 149 NHEIEKLPIIHST------------------KFTSYNARWRMPFEESGSNSNLYYSF----DA---------A----GVH 193 (369)
Q Consensus 149 NHD~~~~~~~~~~------------------~~~~~~~~~~~p~~~~~~~~~~~ys~----~~---------g----~~~ 193 (369)
|||+..+...+.. .......+|.|| ..||++ .. | .++
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P--------~~yY~~~~~f~~~~~~~~~~~g~~~~~v~ 153 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMP--------NYWYHYFTHFTVSSGPSIVKTGHKDLAAA 153 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECS--------SSSEEEEEEEEEC---------CEEEEEE
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCC--------cceEEEEEEeeccccccccccCCCCceEE
Confidence 9999654221000 011234677787 467765 32 3 399
Q ss_pred EEEecCCCCCC----------CChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhc
Q 017588 194 VVMLGSYTDFD----------QNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQA 263 (369)
Q Consensus 194 ~i~lds~~~~~----------~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 263 (369)
||+|||..... ...+|++||+++|++ .+|+||++|+|+|+... +... ..+++.|.++|+++
T Consensus 154 fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~-~~~~---~~l~~~l~~ll~~~ 224 (342)
T 3tgh_A 154 FIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY-SRGS---SYLAYYLLPLLKDA 224 (342)
T ss_dssp EEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST-TCCC---HHHHHHTHHHHHHT
T ss_pred EEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC-CCCc---HHHHHHHHHHHHHc
Confidence 99999964321 125899999999943 47999999999998753 2221 25688999999999
Q ss_pred CceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEE
Q 017588 264 RVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWH 343 (369)
Q Consensus 264 ~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~ 343 (369)
+|+++|+||.|.+++..+ .|+.||++|+||...+. .. ..++|+.|+...+||.++++ +++.++++|+
T Consensus 225 ~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~ 291 (342)
T 3tgh_A 225 EVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHEL-SNNGIVTKFV 291 (342)
T ss_dssp TCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEE-ETTEEEEEEE
T ss_pred CCCEEEECCCcceeEEee--------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEE-ECCEEEEEEE
Confidence 999999999999999983 57999999998876421 11 24567889988999999999 4678999999
Q ss_pred EeCCCCCeeeEEEEEEecCC
Q 017588 344 RNDDDKPIASDSIWLRSLTS 363 (369)
Q Consensus 344 ~~~~g~~~~~d~~~~~~~~~ 363 (369)
.+.+|+ ++|+|+|.|+..
T Consensus 292 ~~~~G~--vld~~~i~k~~~ 309 (342)
T 3tgh_A 292 SSKKGE--VIYTHKLNIKKK 309 (342)
T ss_dssp ETTTTE--EEEEEEEECCCC
T ss_pred ECCCCc--EEEEEEEECCCC
Confidence 867998 999999999854
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=100.00 E-value=6.6e-33 Score=254.38 Aligned_cols=258 Identities=18% Similarity=0.261 Sum_probs=173.9
Q ss_pred CCCeEEEEEeeCCCCCCc----------HHHHHH-HHhcCCCeEEeccccCCCCCC----hHHHHHH-HHhhHhh-hcCC
Q 017588 79 QLPIKFAIVGDLGQTGWT----------NSTLQH-VAKSNYDMLLLPGDLSYADLD----QPLWDSF-GRMVEPL-ASQR 141 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~----------~~~~~~-i~~~~~d~vl~~GD~~~~~~~----~~~~~~~-~~~~~~l-~~~~ 141 (369)
.++++|+++||+|..... .+.+.. ++..+|||||++||++|..+. ...|... ...+... ...+
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 83 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCC
Confidence 478999999999986421 122322 446799999999999886432 2233222 1222211 1268
Q ss_pred cEEEccCCCCCCCCCccccccccccccccccCcCCCCCCCceeEEEEe------CcEEEEEecCCCC-------------
Q 017588 142 PWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEESGSNSNLYYSFDA------AGVHVVMLGSYTD------------- 202 (369)
Q Consensus 142 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~~~~i~lds~~~------------- 202 (369)
|+++++||||...... ....+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 84 p~~~v~GNHD~~~~~~-~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~ 154 (313)
T 1ute_A 84 PWHVLAGNHDHLGNVS-AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE 154 (313)
T ss_dssp CEEECCCHHHHHSCHH-HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCC
T ss_pred CEEEECCCCccCCCcc-ccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccC
Confidence 9999999999943211 000121222344444 46888887 4899999998531
Q ss_pred ----CCCChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEeccccccee
Q 017588 203 ----FDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYER 278 (369)
Q Consensus 203 ----~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r 278 (369)
.....+|++||++.|+++. .+|+|+++|+|+++.... ... ...++.+.+++++++|+++|+||+|.+++
T Consensus 155 ~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~-~~~---~~~~~~l~~~l~~~~v~~~l~GH~H~~~~ 227 (313)
T 1ute_A 155 RPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH-GPT---HCLVKQLLPLLTTHKVTAYLCGHDHNLQY 227 (313)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS-CCC---HHHHHHTHHHHHHTTCSEEEECSSSSEEE
T ss_pred CccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC-CCc---HHHHHHHHHHHHHcCCcEEEECChhhhhh
Confidence 0124689999999999874 378999999999876532 111 24578899999999999999999999998
Q ss_pred eeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCceeeEec----ccceEEEEEEeCceEEEEEEEeCCCCCeeeE
Q 017588 279 FTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISVFREA----SFGHGQLEVVNATHAQWTWHRNDDDKPIASD 354 (369)
Q Consensus 279 ~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d 354 (369)
..+ .+|+.||++|++|.............+++..|... ..||.+|++ +++.++++|+.. +|+ ++|
T Consensus 228 ~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g~--~~~ 296 (313)
T 1ute_A 228 LQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SGK--SLF 296 (313)
T ss_dssp EEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TSC--EEE
T ss_pred ccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CCc--EEE
Confidence 863 35899999999886432111000011123444433 279999999 456899999975 887 899
Q ss_pred EEEEEecCC
Q 017588 355 SIWLRSLTS 363 (369)
Q Consensus 355 ~~~~~~~~~ 363 (369)
+|+|.|...
T Consensus 297 ~~~l~~~~~ 305 (313)
T 1ute_A 297 KTKLPRRAR 305 (313)
T ss_dssp EEEECCCC-
T ss_pred EEEeccccC
Confidence 999998854
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.94 E-value=1.9e-25 Score=206.46 Aligned_cols=239 Identities=15% Similarity=0.157 Sum_probs=163.5
Q ss_pred CCCeEEEEEeeCCCCCC-------------cHHHHHHHHh--cCCCeEEeccccCCCCCChHHHHHHHHhhHhhhc--CC
Q 017588 79 QLPIKFAIVGDLGQTGW-------------TNSTLQHVAK--SNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLAS--QR 141 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~--~~ 141 (369)
..++||+++||+|.... ..++++.+.+ .++|+||++||+++.+. ...+..+.+.++++.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHHhhcCC
Confidence 57899999999997422 1345556655 79999999999998665 3566666677776643 68
Q ss_pred cEEEccCCCCCCCCCccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCC----CCCChhHHHHHHHHh
Q 017588 142 PWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTD----FDQNSDQYKWLEADL 217 (369)
Q Consensus 142 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~----~~~~~~q~~Wl~~~L 217 (369)
|++.++||||.. ..+....... + ......+|++++++++|++||+... .....+|++||++.|
T Consensus 102 pv~~v~GNHD~~-------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l 168 (330)
T 3ib7_A 102 ELVWVMGNHDDR-------AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEEL 168 (330)
T ss_dssp EEEECCCTTSCH-------HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHT
T ss_pred CEEEeCCCCCCH-------HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHH
Confidence 999999999983 1221111100 0 1123678999999999999998653 224689999999999
Q ss_pred ccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEE
Q 017588 218 NKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITI 297 (369)
Q Consensus 218 ~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~ 297 (369)
++... . .+|+++|||++......... .....++.+.+++++++++++|+||+|..+... -+|+.++++
T Consensus 169 ~~~~~--~-~~iv~~Hh~p~~~~~~~~~~-~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~ 236 (330)
T 3ib7_A 169 ATPAP--D-GTILALHHPPIPSVLDMAVT-VELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVA 236 (330)
T ss_dssp TSCCT--T-CEEEECSSCSSCCSSGGGGG-GSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEEC
T ss_pred Hhccc--C-CeEEEEECCCCCCCcccccc-ccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEec
Confidence 98754 2 38999999987653221111 001245788899999999999999999988654 258888888
Q ss_pred CCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEEeCCCC
Q 017588 298 GDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHRNDDDK 349 (369)
Q Consensus 298 G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~ 349 (369)
|+.+.... ...+. ..........||.++++. +..+.++++..+.+.
T Consensus 237 gs~~~~~~----~~~~~-g~~~~~~~~~gy~iv~i~-~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 237 SATCYTQD----LTVAA-GGTRGRDGAQGCNLVHVY-PDTVVHSVIPLGGGE 282 (330)
T ss_dssp CCSSCEEC----TTSCT-TCCCEESCSCEEEEEEEC-SSCEEEEEEECSCCC
T ss_pred CcceeccC----CCCCC-cceeccCCCCceEEEEEE-CCCeEEEEeccCCCC
Confidence 87765321 11111 111223345689999995 456899999865544
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.92 E-value=4.2e-24 Score=192.14 Aligned_cols=231 Identities=13% Similarity=0.147 Sum_probs=152.8
Q ss_pred eEEEEEeeCCCCCC-------------cHHHHHHHHhc--CCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEc
Q 017588 82 IKFAIVGDLGQTGW-------------TNSTLQHVAKS--NYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVT 146 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-------------~~~~~~~i~~~--~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 146 (369)
+||+++||+|.... .+++++.+.+. ++|+||++||+++.+. ...|+.+.+.++.+ .+|++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhc--CCCEEEE
Confidence 58999999998641 13345555543 6899999999998654 34566666666665 5899999
Q ss_pred cCCCCCCCCCcccccccc-cccccc-ccCcCCCCCCCceeEEEEeCcEEEEEecCCCC----CCCChhHHHHHHHHhccc
Q 017588 147 QGNHEIEKLPIIHSTKFT-SYNARW-RMPFEESGSNSNLYYSFDAAGVHVVMLGSYTD----FDQNSDQYKWLEADLNKV 220 (369)
Q Consensus 147 ~GNHD~~~~~~~~~~~~~-~~~~~~-~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~----~~~~~~q~~Wl~~~L~~~ 220 (369)
+||||... .+. .+...| ..+.+ .+..+|+++.++++|++||+... .....+|++||++.|++.
T Consensus 78 ~GNHD~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~ 146 (274)
T 3d03_A 78 PGNHDDKA-------LFLEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG 146 (274)
T ss_dssp CCTTSCHH-------HHHHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHH-------HHHHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhC
Confidence 99999831 111 111111 11110 02467899999999999998643 234689999999999986
Q ss_pred cCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhc-CceEEEecccccceeeeeccCCccCCCCceEEEECC
Q 017588 221 DRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQA-RVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGD 299 (369)
Q Consensus 221 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~ 299 (369)
. .+++|+++|+|++......... ......+.+.++++++ +++++|+||+|..+... ..|+.++++++
T Consensus 147 ~---~~~~iv~~H~p~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------~~g~~~~~~pg 214 (274)
T 3d03_A 147 G---DKPATIFMHHPPLPLGNAQMDP-IACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------YRQALISTLPG 214 (274)
T ss_dssp T---TSCEEEEESSCSSCCSCTTTGG-GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--------ETTEEEEECCC
T ss_pred C---CCCEEEEECCCCcccCCcccCc-ccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe--------ECCEEEEEcCC
Confidence 3 3469999999998654322111 1012356788999998 89999999999987654 24655555543
Q ss_pred -CCCCCCccccCCCCCCCc-eeeEecccceEEEEEEeCceEEEEEEEeC
Q 017588 300 -GGNREGLASRFMNPQPAI-SVFREASFGHGQLEVVNATHAQWTWHRND 346 (369)
Q Consensus 300 -gG~~~~~~~~~~~~~p~~-~~~~~~~~g~~~l~v~~~~~~~~~~~~~~ 346 (369)
++... .. .+.+ ..+.....||.++++.++ .++++++...
T Consensus 215 ~~~~~~-----~~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~~ 255 (274)
T 3d03_A 215 TVHQVP-----YC--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSLA 255 (274)
T ss_dssp SSCBCC-----CC--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEECS
T ss_pred cceeec-----cC--CCccccccccCCCceEEEEEeCC-cEEEEEEecC
Confidence 33321 11 1111 234445679999999654 7888888764
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.92 E-value=3.4e-24 Score=196.92 Aligned_cols=224 Identities=17% Similarity=0.186 Sum_probs=148.9
Q ss_pred CCCeEEEEEeeCCCCCCc--------------------HHHHHHHHhcCCCeEEeccccCCCCCC-----hHHHHHHHHh
Q 017588 79 QLPIKFAIVGDLGQTGWT--------------------NSTLQHVAKSNYDMLLLPGDLSYADLD-----QPLWDSFGRM 133 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~--------------------~~~~~~i~~~~~d~vl~~GD~~~~~~~-----~~~~~~~~~~ 133 (369)
...+||+++||+|..... .++++.+.+.+||+||++||+++.+.. ...++.+.+.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 357999999999976521 234445556899999999999986431 1223334444
Q ss_pred hHhhhcCCcEEEccCCCCCCCCCccccccccccccccc-------------cCcCCCCCCCceeEEEEe-CcEEEEEecC
Q 017588 134 VEPLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWR-------------MPFEESGSNSNLYYSFDA-AGVHVVMLGS 199 (369)
Q Consensus 134 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-------------~p~~~~~~~~~~~ys~~~-g~~~~i~lds 199 (369)
++.+ .+|+++++||||...... ..+.+.+. +|. .+..+|+++. ++++||+||+
T Consensus 83 l~~~--~~p~~~v~GNHD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~ 149 (322)
T 2nxf_A 83 LDAC--SVDVHHVWGNHEFYNFSR------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDA 149 (322)
T ss_dssp HHTT--CSEEEECCCHHHHHHCCH------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCT
T ss_pred HHhc--CCcEEEecCCCCcccCCH------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcC
Confidence 4433 589999999999942111 11111111 121 1357899998 8999999998
Q ss_pred CCC----------------------------------------------CCCChhHHHHHHHHhccccCCCCCeEEEEec
Q 017588 200 YTD----------------------------------------------FDQNSDQYKWLEADLNKVDRGKTPWIVVLIH 233 (369)
Q Consensus 200 ~~~----------------------------------------------~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H 233 (369)
... .....+|++||++.|+++.+ +..++||++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~H 228 (322)
T 2nxf_A 150 YDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSH 228 (322)
T ss_dssp TSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEES
T ss_pred ceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEEc
Confidence 541 01237899999999998753 1345899999
Q ss_pred cCccccCCCCCCCcchHHHHHHHHHHHHhc-CceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCC
Q 017588 234 APWYNTNTAHQGEVESEGMRKAMEGLIHQA-RVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMN 312 (369)
Q Consensus 234 ~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~ 312 (369)
+|++...... ......++.+.++++++ +|+++|+||+|.+++... ..|+.|+++|+.-. .
T Consensus 229 ~p~~~~~~~~---~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~~-------~-- 289 (322)
T 2nxf_A 229 LPVHPCAADP---ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVIE-------T-- 289 (322)
T ss_dssp SCCCTTSSCG---GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGGG-------C--
T ss_pred cCCCCCCCCc---cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchhh-------C--
Confidence 9998754321 11011457889999999 799999999999988651 35788888775411 0
Q ss_pred CCCCceeeEecccceEEEEEEeCceEEEEEEE
Q 017588 313 PQPAISVFREASFGHGQLEVVNATHAQWTWHR 344 (369)
Q Consensus 313 ~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~ 344 (369)
+ ....||.++++. +..+.++.+.
T Consensus 290 ~--------~~~~~y~~v~~~-~~~~~~~~~~ 312 (322)
T 2nxf_A 290 P--------PHSHAFATAYLY-EDRMVMKGRG 312 (322)
T ss_dssp C--------TTSCEEEEEEEC-SSEEEEEEEE
T ss_pred C--------CCCCcEEEEEEE-CCeEEEEecc
Confidence 1 113579999985 4467776554
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.87 E-value=2.3e-20 Score=179.35 Aligned_cols=199 Identities=14% Similarity=0.197 Sum_probs=127.9
Q ss_pred CCCeEEEEEeeCCCCCCc---------------------------HHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHH
Q 017588 79 QLPIKFAIVGDLGQTGWT---------------------------NSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFG 131 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~---------------------------~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~ 131 (369)
..++||++++|+|..... +++++.+.+.+||+||++||+++.+. ...++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE-KTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC-HHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHH
Confidence 578999999999975321 22444455678999999999998665 33456666
Q ss_pred HhhHhhhc-CCcEEEccCCCCCCCCCccc--c--------ccccccccccccCcCC-C---CCCCceeEEEEeCcEEEEE
Q 017588 132 RMVEPLAS-QRPWMVTQGNHEIEKLPIIH--S--------TKFTSYNARWRMPFEE-S---GSNSNLYYSFDAAGVHVVM 196 (369)
Q Consensus 132 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~--~--------~~~~~~~~~~~~p~~~-~---~~~~~~~ys~~~g~~~~i~ 196 (369)
+.++.+.. .+|+++++||||........ . .....|.+.|...... . ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995321100 0 0011112222110000 0 0011234445578999999
Q ss_pred ecCCCC------------CCCChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcC
Q 017588 197 LGSYTD------------FDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQAR 264 (369)
Q Consensus 197 lds~~~------------~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 264 (369)
||+... .....+|++||++.|+++.. +...+|+++|+|++........... ...++.+.+++++++
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~-~~~~~~l~~ll~~~~ 273 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYT-INYNQQVIDALTEGA 273 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSB-CTTHHHHHHHHHHTT
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccc-cccHHHHHHHHHHcC
Confidence 998642 12357999999999988754 2345899999999765432211111 124678889999999
Q ss_pred ceEEEecccccceeee
Q 017588 265 VGVVFAGHVHAYERFT 280 (369)
Q Consensus 265 v~lvl~GH~H~~~r~~ 280 (369)
|+++|+||+|......
T Consensus 274 v~lvl~GH~H~~~~~~ 289 (443)
T 2xmo_A 274 MDFSLSGHIHTQNIRS 289 (443)
T ss_dssp CCEEEECSSCSCEEEE
T ss_pred CeEEEECCcccCchhh
Confidence 9999999999977643
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.75 E-value=1.2e-17 Score=145.49 Aligned_cols=187 Identities=11% Similarity=-0.009 Sum_probs=109.6
Q ss_pred CCeEEEEEeeCCCCCCc-HHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCcc
Q 017588 80 LPIKFAIVGDLGQTGWT-NSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPII 158 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 158 (369)
..+||+++||+|.+... +++++.+.+.++|+||++||+++.+.....+..+.+.++.+ ..|+++++||||....
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~--- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW--- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH---
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH---
Confidence 35899999999976322 34445555568999999999998764444444455555443 5799999999998421
Q ss_pred cccccccccccc----ccCcCCCCCCCceeEEEEeC-cEEEEEecCCC--CCCCChhH--------HHHHHHHhccccCC
Q 017588 159 HSTKFTSYNARW----RMPFEESGSNSNLYYSFDAA-GVHVVMLGSYT--DFDQNSDQ--------YKWLEADLNKVDRG 223 (369)
Q Consensus 159 ~~~~~~~~~~~~----~~p~~~~~~~~~~~ys~~~g-~~~~i~lds~~--~~~~~~~q--------~~Wl~~~L~~~~~~ 223 (369)
......+ ..|... .-....+.++ +++|+.++... .+....+| .+|+++.|++...
T Consensus 79 -----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 148 (228)
T 1uf3_A 79 -----EYLREAANVELVHPEMR----NVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD- 148 (228)
T ss_dssp -----HHHHHHHHHHHHCTTEE----ECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS-
T ss_pred -----HHHHhhhhhhccCcceE----EcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCC-
Confidence 0011110 011100 0001124556 79999887521 11112222 2344555555432
Q ss_pred CCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECC
Q 017588 224 KTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGD 299 (369)
Q Consensus 224 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~ 299 (369)
...|+++|+|++....... ....+.+++++++++++++||+|... .. .+++.++..|+
T Consensus 149 --~~~il~~H~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~GH~H~~~-~~--------~~~~~~in~Gs 206 (228)
T 1uf3_A 149 --YPKIFLFHTMPYHKGLNEQ-------GSHEVAHLIKTHNPLLVLVAGKGQKH-EM--------LGASWVVVPGD 206 (228)
T ss_dssp --CCEEEEESSCBCBTTTBTT-------SBHHHHHHHHHHCCSEEEECCSSCEE-EE--------ETTEEEEECCB
T ss_pred --CCeEEEEccCcccCCcccc-------CHHHHHHHHHHhCCCEEEEcccccCc-cc--------cCCceEEEecc
Confidence 2489999999876411111 12456677888899999999999322 11 13566666554
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.69 E-value=1.3e-16 Score=141.93 Aligned_cols=183 Identities=12% Similarity=0.104 Sum_probs=102.0
Q ss_pred CeEEEEEeeCCCCCCc-HHHHHHHHhcCCCeEEeccccCCCCCChHH-----------------------HHHHHHhhHh
Q 017588 81 PIKFAIVGDLGQTGWT-NSTLQHVAKSNYDMLLLPGDLSYADLDQPL-----------------------WDSFGRMVEP 136 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~-----------------------~~~~~~~~~~ 136 (369)
++||+++||+|.+... .++++.+...++|+||++||+++.+..... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 6899999999976543 456666667799999999999975532100 0223334444
Q ss_pred hhc-CCcEEEccCCCCCCCCCccccccccccccccc-cCcCCCCCCCceeEEEEeCcEEEEEecCCCCC-CCChhHH---
Q 017588 137 LAS-QRPWMVTQGNHEIEKLPIIHSTKFTSYNARWR-MPFEESGSNSNLYYSFDAAGVHVVMLGSYTDF-DQNSDQY--- 210 (369)
Q Consensus 137 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~-~~~~~q~--- 210 (369)
+.. .+|+++++||||..... .+........ .|.. . .-.....+.+++++|++++..... ....+++
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~-----~~~~~~~~~~~~~~~--~-~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 156 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI-----FLRAAYEAETAYPNI--R-VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKY 156 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH-----HHHHHHHTTTTCTTE--E-ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEE
T ss_pred HHhcCCcEEEEcCCCCchhhh-----hHHHHhhhccCCcce--E-EecCcceEEECCEEEEecCCCcCCCCcCHHHHhhc
Confidence 443 48999999999984210 0001110000 0000 0 001112377889999999853211 1112222
Q ss_pred -HHHH----HHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccc
Q 017588 211 -KWLE----ADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVH 274 (369)
Q Consensus 211 -~Wl~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 274 (369)
.|+. +.|++.. + ...|+++|+|++..................+.+++++++++++++||+|
T Consensus 157 ~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 157 PRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred chhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 2432 3333332 2 2369999999875311110000000122467778888999999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.65 E-value=2.9e-16 Score=145.22 Aligned_cols=235 Identities=13% Similarity=0.110 Sum_probs=125.3
Q ss_pred CCCeEEEEEeeCCCC----CC-------------cHHHHHHHHhcCCCeEEeccc-cCCCCCCh-HHHHHHHHhhHhhhc
Q 017588 79 QLPIKFAIVGDLGQT----GW-------------TNSTLQHVAKSNYDMLLLPGD-LSYADLDQ-PLWDSFGRMVEPLAS 139 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~----~~-------------~~~~~~~i~~~~~d~vl~~GD-~~~~~~~~-~~~~~~~~~~~~l~~ 139 (369)
...+||+++||+|.+ .. .+++++.+.+.+||+||++|| +++..... .....+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 468999999999976 21 123445556789999999999 77655432 234445566666643
Q ss_pred CCcEEEccCCCCCCCCCccccccccccccc----cccCcCCCCCCCceeEEEEeCcEEEEEecCCCCC-------CCChh
Q 017588 140 QRPWMVTQGNHEIEKLPIIHSTKFTSYNAR----WRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDF-------DQNSD 208 (369)
Q Consensus 140 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~-------~~~~~ 208 (369)
.+|+++++||||... .. .+..+... +..-.+. .......++.+++.|++++..... ....+
T Consensus 96 ~~pv~~i~GNHD~~~-~~----~~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~ 167 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-LK----LFGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 167 (336)
T ss_dssp HSCEEECCC-------CH----HHHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEECCC-------CCSSHHHH
T ss_pred cCCEEEECCCCCccc-cc----cHHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHH
Confidence 389999999999943 11 11111110 1111000 000011122356888888643221 11245
Q ss_pred HHHHHHHHhcccc-CCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCcc
Q 017588 209 QYKWLEADLNKVD-RGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKP 287 (369)
Q Consensus 209 q~~Wl~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~ 287 (369)
|.+|+.+.|...- . ...+.|+++|.|+....... +... .....+...+.+.++|++++||+|..+...
T Consensus 168 ~~~~~~~~l~~~~~~-~~~~~Ill~H~~~~~~~~~~-~~~~--~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~------- 236 (336)
T 2q8u_A 168 FLESRLNKLYEEALK-KEDFAIFMGHFTVEGLAGYA-GIEQ--GREIIINRALIPSVVDYAALGHIHSFREIQ------- 236 (336)
T ss_dssp HHHHHHHHHHHHHHT-CSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEEE-------
T ss_pred HHHHHHHHHHHhccC-CCCCEEEEECccccCCCCCC-Cccc--hhhcccCHHHccccCCEEEEccccCceEeC-------
Confidence 7788887776531 1 23579999999986432110 0000 000001112334689999999999988654
Q ss_pred CCCCceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEEeCC
Q 017588 288 DNCGPVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHRNDD 347 (369)
Q Consensus 288 ~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~ 347 (369)
.++..+.+|+.... .+... ....||..+++.++...+++++....
T Consensus 237 --~~~~i~y~GS~~~~-----s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 237 --KQPLTIYPGSLIRI-----DFGEE--------ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp --ETTEEEECCCSSCC-----SGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred --CCccEEECCCCcCC-----Ccccc--------CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 12333555543211 11110 01358999999765568899988644
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.60 E-value=3.3e-14 Score=122.76 Aligned_cols=187 Identities=14% Similarity=0.177 Sum_probs=113.2
Q ss_pred CeEEEEEeeCCCCCC---cHHHHHH-HHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCC
Q 017588 81 PIKFAIVGDLGQTGW---TNSTLQH-VAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLP 156 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 156 (369)
.+||+++||+|.... ..+.+.. +...++|+|+++||+++ . ...+.++.+ ..|++.|+||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~----~----~~l~~l~~~--~~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS----Q----EYVEMLKNI--TKNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC----H----HHHHHHHHH--CSCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC----H----HHHHHHHHc--CCCEEEecCCCcCcccc
Confidence 589999999997542 2233333 34678999999999985 2 223444544 36999999999984211
Q ss_pred ccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCc
Q 017588 157 IIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPW 236 (369)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~ 236 (369)
. ...+.. .+| .. ...+. ...+|+++|.++
T Consensus 95 ~-----~~~~~~--~lp---------~~-------------------------------~~~~~----~~~~i~l~Hg~~ 123 (215)
T 2a22_A 95 P-----DPESNG--VFP---------EY-------------------------------VVVQI----GEFKIGLMHGNQ 123 (215)
T ss_dssp C-----CGGGTB--CCC---------SE-------------------------------EEEEE----TTEEEEEECSTT
T ss_pred c-----ChhhHh--hCC---------ce-------------------------------EEEec----CCeEEEEEcCCc
Confidence 0 000000 000 00 00001 124799999655
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCC
Q 017588 237 YNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPA 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~ 316 (369)
+.... ..+.+..++++.+++++++||+|...... .+++.+++.|+.+.+.. . ...
T Consensus 124 ~~~~~----------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~-~~~--- 178 (215)
T 2a22_A 124 VLPWD----------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS---A-LTP--- 178 (215)
T ss_dssp SSSTT----------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC---T-TST---
T ss_pred cCCCC----------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCC---C-CCC---
Confidence 43211 12456667777899999999999865433 24788899888655311 0 000
Q ss_pred ceeeEecccceEEEEEEeCceEEEEEEEeCCCCCeeeEEEEEEe
Q 017588 317 ISVFREASFGHGQLEVVNATHAQWTWHRNDDDKPIASDSIWLRS 360 (369)
Q Consensus 317 ~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d~~~~~~ 360 (369)
....+|.++++.+ ..++++++...+++ ..+.+..+.|
T Consensus 179 -----~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~~ 215 (215)
T 2a22_A 179 -----DAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFSK 215 (215)
T ss_dssp -----TCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred -----CCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEeeC
Confidence 1135799999864 57889988876665 3566665543
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.59 E-value=1.2e-13 Score=117.02 Aligned_cols=178 Identities=13% Similarity=0.152 Sum_probs=112.7
Q ss_pred CeEEEEEeeCCCCCC---cHHHHHH-HHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCC
Q 017588 81 PIKFAIVGDLGQTGW---TNSTLQH-VAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLP 156 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 156 (369)
-+||+++||+|.... ..+.+.. +...++|+|+++||+++ .+ ..+.++.+ ..|++.++||||...
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~----~~----~~~~l~~~--~~~~~~v~GNhD~~~-- 77 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----KE----SYDYLKTL--AGDVHIVRGDFDENL-- 77 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----HH----HHHHHHHH--CSEEEECCCTTCCCT--
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC----HH----HHHHHHhc--CCCEEEEcCCcCccc--
Confidence 479999999997532 2233333 33567999999999984 22 22344444 368999999999831
Q ss_pred ccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCc
Q 017588 157 IIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPW 236 (369)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~ 236 (369)
.+|. ...++. ..+.|+++|.++
T Consensus 78 --------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~~ 99 (192)
T 1z2w_A 78 --------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGHQ 99 (192)
T ss_dssp --------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSCC
T ss_pred --------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCCc
Confidence 1121 111110 124789999655
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCC
Q 017588 237 YNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPA 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~ 316 (369)
+.... ..+.+..++++.+++++++||+|...... .+++.++..|+.+.+.. .. ..
T Consensus 100 ~~~~~----------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~~-~~--- 154 (192)
T 1z2w_A 100 VIPWG----------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYN---AL-ET--- 154 (192)
T ss_dssp CCBTT----------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCC---SS-CS---
T ss_pred CCCCC----------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCC---CC-Cc---
Confidence 43211 12456667777899999999999865433 25788899888655321 00 00
Q ss_pred ceeeEecccceEEEEEEeCceEEEEEEEeCCCCCeeeEEEEEEe
Q 017588 317 ISVFREASFGHGQLEVVNATHAQWTWHRNDDDKPIASDSIWLRS 360 (369)
Q Consensus 317 ~~~~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d~~~~~~ 360 (369)
....+|+++++.+ ..++++++....++ ..+.++.+.|
T Consensus 155 -----~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 155 -----NIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp -----CCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred -----CCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 1235899999864 57889998876665 4677777765
No 15
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.56 E-value=4.8e-14 Score=132.66 Aligned_cols=229 Identities=9% Similarity=-0.025 Sum_probs=122.8
Q ss_pred CCCeEEEEEeeCCCCCC--------------cHHHHHHHHhcCCCeEEeccccCCCCCC-hHHHHHHHHhhHhhhc-CCc
Q 017588 79 QLPIKFAIVGDLGQTGW--------------TNSTLQHVAKSNYDMLLLPGDLSYADLD-QPLWDSFGRMVEPLAS-QRP 142 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~~~~~d~vl~~GD~~~~~~~-~~~~~~~~~~~~~l~~-~~P 142 (369)
..++||+++||+|.+.. ..++++.+...+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 57899999999998742 1234455557899999999999986643 2344556666777654 489
Q ss_pred EEEccCCCCCCCCCccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccC
Q 017588 143 WMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDR 222 (369)
Q Consensus 143 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~ 222 (369)
+++++||||....... ......+...+..-. ....+..+-+++.+++++...... .....+||+..-.+...
T Consensus 98 v~~v~GNHD~~~~~~~-~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~~ 169 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGE-ESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAKN 169 (386)
T ss_dssp EEECCCGGGSCSSTTS-CCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCccccc-cCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhccc
Confidence 9999999998532110 000000100000000 011221112458888888643221 12223343321111111
Q ss_pred CCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCC
Q 017588 223 GKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGN 302 (369)
Q Consensus 223 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~ 302 (369)
..+.|+++|+|+.......... . +.. +. ++|++++||+|..+... ..++..+.+|+...
T Consensus 170 --~~~~Ill~H~~~~~~~~~~~~~-~-------~~~-l~--~~d~v~~GH~H~~~~~~--------~~~~~i~ypGS~~~ 228 (386)
T 3av0_A 170 --YKKKILMLHQGINPYIPLDYEL-E-------HFD-LP--KFSYYALGHIHKRILER--------FNDGILAYSGSTEI 228 (386)
T ss_dssp --CSSEEEEECCCCTTTSSSSCSS-C-------GGG-SC--CCSEEEECSCCSCEEEE--------CSSSEEEECCCSSC
T ss_pred --CCCEEEEECcCccccCCCCccc-C-------HHH-hh--hCCeEEccCCCCCcccc--------CCCceEEECCcccc
Confidence 2348999999875321110000 0 001 11 38999999999875332 23566666665422
Q ss_pred CCCccccCCCCCCCceeeEecccceEEEEEEeC--ceEEEEEEEe
Q 017588 303 REGLASRFMNPQPAISVFREASFGHGQLEVVNA--THAQWTWHRN 345 (369)
Q Consensus 303 ~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~--~~~~~~~~~~ 345 (369)
. .+. +...+.....||.++++.+. ...+++++..
T Consensus 229 ~-----~~~----e~~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l 264 (386)
T 3av0_A 229 I-----YRN----EYEDYKKEGKGFYLVDFSGNDLDISDIEKIDI 264 (386)
T ss_dssp C-----SGG----GTHHHHHHCSEEEEEECCSSSCCGGGEEEEEC
T ss_pred c-----Ccc----hhccccCCCCEEEEEEEecCcCCCceEEEEEC
Confidence 1 111 00000112357889998541 4567888876
No 16
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.54 E-value=4.1e-14 Score=126.58 Aligned_cols=205 Identities=15% Similarity=0.062 Sum_probs=113.6
Q ss_pred CCCeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCcc
Q 017588 79 QLPIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPII 158 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 158 (369)
...+||+++||+|...... ...++|+||++||+++.+. ......+.+.++.+. ..|+++++||||.......
T Consensus 57 ~~~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g~-~~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELGL-PSEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSCC-HHHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCCC-HHHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 4669999999999765321 2368999999999998665 334555556666552 2569999999999533210
Q ss_pred cc----ccccccccccccCcC---CCCC-CCcee----EEEEeCcEEEEEecCCCCCCC---ChhHHHHHHHHhccccCC
Q 017588 159 HS----TKFTSYNARWRMPFE---ESGS-NSNLY----YSFDAAGVHVVMLGSYTDFDQ---NSDQYKWLEADLNKVDRG 223 (369)
Q Consensus 159 ~~----~~~~~~~~~~~~p~~---~~~~-~~~~~----ys~~~g~~~~i~lds~~~~~~---~~~q~~Wl~~~L~~~~~~ 223 (369)
.. +.+..+...-..+.. .... ..+.. -+..+++++|++..-...+.. ..++.+++.+.+.....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 00 000000000000000 0000 00111 235678899988654322221 12222344333343322
Q ss_pred CCCeEEEEeccCccccCCCCC-CCcchHHHHHHHHHHH-HhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCC
Q 017588 224 KTPWIVVLIHAPWYNTNTAHQ-GEVESEGMRKAMEGLI-HQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGG 301 (369)
Q Consensus 224 ~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~~~l~~l~-~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG 301 (369)
+. .|+++|.|++....... .... ...+.+.+.+ ++.+++++++||+|....... .+++++|+.|+-|
T Consensus 208 ~~--dILvTH~PP~g~~D~~~~~~~~--~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~ 276 (296)
T 3rl5_A 208 GT--DILMTHGPPLGFRDWVPKELQR--VGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCT 276 (296)
T ss_dssp TC--SEEEESSCBTTSSCEEGGGTEE--CSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSC
T ss_pred CC--eEEEECCCccccccccccccCc--CChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCC
Confidence 23 59999999987533110 0000 1234566666 688999999999997543221 3578889988876
Q ss_pred CC
Q 017588 302 NR 303 (369)
Q Consensus 302 ~~ 303 (369)
..
T Consensus 277 ~~ 278 (296)
T 3rl5_A 277 VS 278 (296)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.52 E-value=5e-14 Score=124.70 Aligned_cols=187 Identities=8% Similarity=-0.041 Sum_probs=103.6
Q ss_pred eEEEEEeeCCCCCC-cHHHHHHHH---hc--CCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCC
Q 017588 82 IKFAIVGDLGQTGW-TNSTLQHVA---KS--NYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKL 155 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-~~~~~~~i~---~~--~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 155 (369)
+||+++||+|.... ..++++.+. .. ++|+||++||+++.+..... ..+.++.+....|++.++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~---~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKE---VIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHH---HHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHH---HHHHHHhhHhhcCeeEEecchHHHhh
Confidence 58999999996432 234555555 55 79999999999976643222 23344444323689999999998321
Q ss_pred CccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecC--CCCCCCChhHHHHHHHHhccccCCCCCeEEEEec
Q 017588 156 PIIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGS--YTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIH 233 (369)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds--~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H 233 (369)
... .....+. +. .. ++..... ... ........+|++||++........-....|+++|
T Consensus 79 ~~~--~~~~~~~-----~~-------~~---~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H 138 (252)
T 1nnw_A 79 MSD--PHATDPG-----YI-------DK---LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVY 138 (252)
T ss_dssp HSC--TTCSSSG-----GG-------GG---SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEES
T ss_pred ccc--cccCCcc-----cc-------cc---hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEc
Confidence 000 0000000 00 00 0000000 000 0000113578889886443321100123788999
Q ss_pred cCccccCC-CCCCCcchHHHHHHHHHHHHhc-CceEEEecccccceeeeeccCCccCCCCceEEEECCCCCC
Q 017588 234 APWYNTNT-AHQGEVESEGMRKAMEGLIHQA-RVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNR 303 (369)
Q Consensus 234 ~P~~~~~~-~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~ 303 (369)
++++.... ..... ...+.+.++++++ +++++|+||+|...... .+++.+|+.|+.|.+
T Consensus 139 ~~p~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~~ 198 (252)
T 1nnw_A 139 GSPINPFDGEVLAE----QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFP 198 (252)
T ss_dssp SCSSCTTTCCCCSS----CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSC
T ss_pred CCCCCCcccccCCC----CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccCC
Confidence 88743221 11111 1235677788888 99999999999866543 247888999987654
No 18
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.51 E-value=1.6e-13 Score=122.62 Aligned_cols=219 Identities=15% Similarity=0.085 Sum_probs=122.2
Q ss_pred CCCeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCc
Q 017588 79 QLPIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPI 157 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 157 (369)
....|++++||+|.... .+++++.+...++|.|+++||+++.+.... .+.+.++.+ .|++.++||||......
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~---~~~~~l~~~---~~~~~v~GNhD~~~~~~ 82 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRR---RILDLLDQL---PITARVLGNWEDSLWHG 82 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSH---HHHHHHHTS---CEEEECCCHHHHHHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH---HHHHHHHcc---CCEEEEcCChHHHHHHh
Confidence 46899999999995432 245666666778999999999997654321 223333333 47899999999831100
Q ss_pred cccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCcc
Q 017588 158 IHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWY 237 (369)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~ 237 (369)
. . ... .+..|. ..+.. . ...+.......++++||+.........-....|++.|..+.
T Consensus 83 ~-~-~~~----~~~~~~-------~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 83 V-R-KEL----DSTRPS-------QRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp H-T-TCS----CTTSHH-------HHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred h-c-ccc----CCCcHH-------HHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 0 0 000 000000 00000 0 00000112357889999865443211002346888897654
Q ss_pred ccCCC-CCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCC
Q 017588 238 NTNTA-HQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPA 316 (369)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~ 316 (369)
..... .... ...+.+..++++.+++++|+||+|....... .++..+|+.|+-|.+... .+.++
T Consensus 141 ~~~~~~~~~~----~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~~-----~~~~~ 204 (270)
T 3qfm_A 141 KNWGRELIHT----GKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFFL-----DAQLR 204 (270)
T ss_dssp BSSSSTTSTT----CCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCCS-----STTGG
T ss_pred CCCCceecCC----CcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCCC-----Ccccc
Confidence 32111 0111 1235677777788999999999996543321 358899999998876321 11000
Q ss_pred ceeeEecccceEEEEEEeCceEEEEEEEe
Q 017588 317 ISVFREASFGHGQLEVVNATHAQWTWHRN 345 (369)
Q Consensus 317 ~~~~~~~~~g~~~l~v~~~~~~~~~~~~~ 345 (369)
.+....|++|++.++...+++|++.
T Consensus 205 ----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 205 ----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp ----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred ----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 0112468999986544467888764
No 19
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.48 E-value=3.7e-13 Score=126.19 Aligned_cols=230 Identities=15% Similarity=0.151 Sum_probs=122.8
Q ss_pred eEEEEEeeCCCCCC----c-------------HHHHHHHHhcCCCeEEeccccC-CCCCC-hHHHHHHHHhhHhhhcCCc
Q 017588 82 IKFAIVGDLGQTGW----T-------------NSTLQHVAKSNYDMLLLPGDLS-YADLD-QPLWDSFGRMVEPLASQRP 142 (369)
Q Consensus 82 ~~f~~~gD~~~~~~----~-------------~~~~~~i~~~~~d~vl~~GD~~-~~~~~-~~~~~~~~~~~~~l~~~~P 142 (369)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999998754 1 2334444578999999999999 54433 3345555666666653489
Q ss_pred EEEccCCCCCCCCCccccccccccccccccCcCCCCCCCceeEEEE--eC-cEEEEEecCCCCCC----CChhHHHHHHH
Q 017588 143 WMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEESGSNSNLYYSFD--AA-GVHVVMLGSYTDFD----QNSDQYKWLEA 215 (369)
Q Consensus 143 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~--~g-~~~~i~lds~~~~~----~~~~q~~Wl~~ 215 (369)
+++++||||..... .+..... .++.+.........+.+. .| .+.++.+.-..... ....+.+|+.+
T Consensus 81 v~~i~GNHD~~~~~-----~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 81 VVVLPGNQDWKGLK-----LFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES 153 (379)
T ss_dssp EEECCCTTSCTTHH-----HHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHH
T ss_pred EEEEcCCCccccCc-----ccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHH
Confidence 99999999973110 0111100 011100000001112222 23 37777775322111 12456789988
Q ss_pred Hhc----cccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCC
Q 017588 216 DLN----KVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCG 291 (369)
Q Consensus 216 ~L~----~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g 291 (369)
.|+ +..+ .....|+++|.++.........+.. ....+...+...++|++++||.|..+... ++
T Consensus 154 ~l~~~~~~~~~-~~~~~I~l~H~~v~g~~~~~~se~~---~~~~v~~~~~~~~~dyvalGH~H~~q~~~---------~~ 220 (379)
T 3tho_B 154 RLNKLYEEALK-KEDFAIFMGHFTVEGLAGYAGIEQG---REIIINRALIPSVVDYAALGHIHSFREIQ---------KQ 220 (379)
T ss_dssp HHHHHHHHHHT-CSSEEEEEEESCBSCCCC----------CSCCBCGGGSCTTSSEEEEESCSSCEEEE---------ET
T ss_pred HHHHHHHHhcC-CCCCeEEEEeccccCCccCCCCccc---cccccCHHHcCcCCCEEEcccccCCeEeC---------CC
Confidence 887 2211 2356899999987532210000000 00111112234579999999999987543 12
Q ss_pred ceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeCceEEEEEEE
Q 017588 292 PVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNATHAQWTWHR 344 (369)
Q Consensus 292 ~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~~~~~~~~~~ 344 (369)
...+.+|+-... .+... ....||.++++.++...+++++.
T Consensus 221 ~~i~y~GS~~~~-----~f~E~--------~~~k~~~lv~~~~~~~~~v~~i~ 260 (379)
T 3tho_B 221 PLTIYPGSLIRI-----DFGEE--------ADEKGAVFVELKRGEPPRYERID 260 (379)
T ss_dssp TEEEECCCSSCC-----SGGGS--------SSCCEEEEEECCSSSCCEEEEEE
T ss_pred CcEEecCCCCCC-----Ccccc--------cCCCEEEEEEEcCCCcceEEEeC
Confidence 333444442111 22111 11357888888665567788876
No 20
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.47 E-value=2.1e-12 Score=107.77 Aligned_cols=163 Identities=12% Similarity=0.148 Sum_probs=104.3
Q ss_pred CeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCccc
Q 017588 81 PIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPIIH 159 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 159 (369)
.+|++++||+|.... .+++++.+.. ++|+|+++||+.. +.++.+. .|++.++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 589999999994321 1234444433 8999999999842 1233333 29999999999831
Q ss_pred cccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCcccc
Q 017588 160 STKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNT 239 (369)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~ 239 (369)
.+|. .. .+ .. ....|+++|.|++..
T Consensus 66 -----------~~p~---------~~--------~~-----------------------~~----~~~~i~~~Hg~~~~~ 90 (176)
T 3ck2_A 66 -----------GYPE---------RL--------VT-----------------------EL----GSTKIIQTHGHLFDI 90 (176)
T ss_dssp -----------TCCS---------EE--------EE-----------------------EE----TTEEEEEECSGGGTT
T ss_pred -----------cCCc---------EE--------EE-----------------------EE----CCeEEEEECCCccCC
Confidence 1121 00 00 00 124799999988643
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCcee
Q 017588 240 NTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISV 319 (369)
Q Consensus 240 ~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~ 319 (369)
.. ..+.+.+++++.+++++++||+|...... .+++.++..|+.|.+. . ..+
T Consensus 91 ~~----------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~----~---~~~---- 141 (176)
T 3ck2_A 91 NF----------NFQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR----G---TIR---- 141 (176)
T ss_dssp TT----------CSHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC----T---TCC----
T ss_pred CC----------CHHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCC----C---CCC----
Confidence 21 11356677788899999999999876543 2478889998876541 0 111
Q ss_pred eEecccceEEEEEEeCceEEEEEEEeCCCCCeeeEE
Q 017588 320 FREASFGHGQLEVVNATHAQWTWHRNDDDKPIASDS 355 (369)
Q Consensus 320 ~~~~~~g~~~l~v~~~~~~~~~~~~~~~g~~~~~d~ 355 (369)
..+|.++++. +..+++++++. +|+ .+.+
T Consensus 142 ----~~~y~il~~~-~~~~~v~~~~~-~~~--~~~~ 169 (176)
T 3ck2_A 142 ----ECLYARVEID-DSYFKVDFLTR-DHE--VYPG 169 (176)
T ss_dssp ----SCCEEEEEEC-SSEEEEEEECT-TSC--BCTT
T ss_pred ----CCeEEEEEEc-CCEEEEEEEEE-CCE--Ecch
Confidence 2479999985 45788999875 566 4443
No 21
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.40 E-value=1.6e-11 Score=102.51 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCeEEEEEeeCCCC---CCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCC
Q 017588 80 LPIKFAIVGDLGQT---GWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEI 152 (369)
Q Consensus 80 ~~~~f~~~gD~~~~---~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 152 (369)
+-+|++++||+|.. ....++++.+. .++|+|+++||+++. ...+.++.+ ..|++.++||||.
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~GNhD~ 85 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVHGNMDY 85 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECCCSSSC
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEECCCCc
Confidence 34899999999942 22345555554 789999999999851 223344444 3699999999998
No 22
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.37 E-value=1.1e-12 Score=111.46 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=90.9
Q ss_pred eEEEEEeeCCCCCCc--------------HHHHHHHHh--cCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEE
Q 017588 82 IKFAIVGDLGQTGWT--------------NSTLQHVAK--SNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMV 145 (369)
Q Consensus 82 ~~f~~~gD~~~~~~~--------------~~~~~~i~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 145 (369)
++|+++||+|.+... +.+++.+.+ .++|+|+++||+++.+.. +..+.+.++.+ ..|++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~---~~~~~~~l~~l--~~~~~~ 76 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND---KNEYLRIWKAL--PGRKIL 76 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC---TTSHHHHHHHS--SSEEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchh---HHHHHHHHHHC--CCCEEE
Confidence 689999999975432 123344443 489999999999976411 12233445554 358999
Q ss_pred ccCCCCCCCCCccccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCC
Q 017588 146 TQGNHEIEKLPIIHSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKT 225 (369)
Q Consensus 146 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~ 225 (369)
++||||... ..+...|. . + .+..|| .+. .
T Consensus 77 v~GNhD~~~---------~~~~~~~~--------------~----------l----------~~~~~l----~~~----~ 105 (195)
T 1xm7_A 77 VMGNHDKDK---------ESLKEYFD--------------E----------I----------YDFYKI----IEH----K 105 (195)
T ss_dssp ECCTTCCCH---------HHHTTTCS--------------E----------E----------ESSEEE----EEE----T
T ss_pred EeCCCCCch---------hhhhhhhh--------------c----------h----------hHHHHH----Hhc----C
Confidence 999999831 01111110 0 0 011111 111 1
Q ss_pred CeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCC-CceEEEECC
Q 017588 226 PWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNC-GPVHITIGD 299 (369)
Q Consensus 226 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~-g~~~i~~G~ 299 (369)
...|+++|+|++....... ....+.+.+++++++++++|+||+|...... .++ .-+ |+.|+.+|+
T Consensus 106 ~~~i~~~H~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g--~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 106 GKRILLSHYPAKDPITERY-----PDRQEMVREIYFKENCDLLIHGHVHWNREGI--KCA--CKDYRIECINANV 171 (195)
T ss_dssp TEEEEEESSCSSCSSCCSC-----HHHHHHHHHHHHHTTCSEEEECCCCCCSCC----CC--TTSSSCCEEECBG
T ss_pred CcEEEEEccCCcCCCcccc-----cchHHHHHHHHHHcCCcEEEECCcCCCCccc--ccc--cccCCcceEEEeE
Confidence 2479999999876432211 1345788888999999999999999865432 111 112 566777765
No 23
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.36 E-value=2.2e-12 Score=113.68 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=100.2
Q ss_pred CCeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCcc
Q 017588 80 LPIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPII 158 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 158 (369)
..+|++++||+|.... ..++++.+. ++|.++++||+++.+..... ..+.++.+ .+++.++||||.......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~---~~~~l~~~---~~~~~v~GNhD~~~~~~~ 73 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRE---CVELVRVL---APNISVIGNHDWACIGRL 73 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHH---HHHHHHHH---CSSEECCCHHHHHHTCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHH---HHHHHHhc---CCCEEEeCchHHHHhccC
Confidence 4689999999994422 123344443 89999999999976653222 23334443 235899999998422110
Q ss_pred ccccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCccc
Q 017588 159 HSTKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYN 238 (369)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~ 238 (369)
... .+. +... .... ........++++||+........ . .++++|.++..
T Consensus 74 ---~~~----~~~-~~~~----~~~~---------------~~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~ 122 (246)
T 3rqz_A 74 ---SLD----EFN-PVAR----FASY---------------WTTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRH 122 (246)
T ss_dssp ---CCC------C-GGGG----CHHH---------------HHHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSS
T ss_pred ---Ccc----ccC-HHHH----HHHH---------------HHHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCC
Confidence 000 000 0000 0000 00011347889999975544332 1 47888987654
Q ss_pred cCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeee----------cc--CCcc-CCCCceEEEECCCCCC
Q 017588 239 TNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTR----------VS--NGKP-DNCGPVHITIGDGGNR 303 (369)
Q Consensus 239 ~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~----------~~--~~~~-~~~g~~~i~~G~gG~~ 303 (369)
.... ... ....+.+++++++++++|+||+|....... .. .... -+.|..+|+.||-|.+
T Consensus 123 ~~~~-~~~-----~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 123 PIWE-YIY-----NARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQP 194 (246)
T ss_dssp TTTC-CCC-----SHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCC
T ss_pred cccc-ccC-----ChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCC
Confidence 3211 111 125667788999999999999997432220 00 0000 0235788999998886
No 24
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.34 E-value=9.4e-11 Score=109.81 Aligned_cols=244 Identities=14% Similarity=0.051 Sum_probs=127.4
Q ss_pred CCCeEEEEEeeCCCCCCc-------------HHHHHHHHhcCCCeEEeccccCCCCCChH-HHHHHHHhhHh--------
Q 017588 79 QLPIKFAIVGDLGQTGWT-------------NSTLQHVAKSNYDMLLLPGDLSYADLDQP-LWDSFGRMVEP-------- 136 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GD~~~~~~~~~-~~~~~~~~~~~-------- 136 (369)
...+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.+++
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~ 90 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 90 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 578999999999987431 34555666889999999999998765532 22333333333
Q ss_pred ----hh----------------------cCCcEEEccCCCCCCCCCccccccccccccccccCcC----CCC-CCCc---
Q 017588 137 ----LA----------------------SQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFE----ESG-SNSN--- 182 (369)
Q Consensus 137 ----l~----------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~----~~~-~~~~--- 182 (369)
|. ..+|++++.||||..... .+......+..|.. +.. ...+
T Consensus 91 ~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~-----~~~s~~~lL~~~g~v~l~g~~~~~~~i~~ 165 (417)
T 4fbw_A 91 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD-----GRYSALDILQVTGLVNYFGRVPENDNIVV 165 (417)
T ss_dssp CCEECC------------CCGGGCTTBCBSSCEEECCCGGGC----------CCCHHHHHHHTTSCEECCCCC---CEEE
T ss_pred cceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc-----ccccHHHHhccCCeEEEeCCcccCCceeE
Confidence 21 268999999999994321 11000111111110 000 0000
Q ss_pred eeEEEEeCc--EEEEEecCCCCCCCChhHH-HHHHHHhcc-cc---CCCCCeEEEEeccCccccCCCCCCCcchHHHHHH
Q 017588 183 LYYSFDAAG--VHVVMLGSYTDFDQNSDQY-KWLEADLNK-VD---RGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKA 255 (369)
Q Consensus 183 ~~ys~~~g~--~~~i~lds~~~~~~~~~q~-~Wl~~~L~~-~~---~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~ 255 (369)
....+.-|+ +.+.++.- .. .+.+ .++.+...+ .. .....+.|++.|........ .....
T Consensus 166 ~pv~l~~g~~~valyG~~~----~~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~--~~yip------- 231 (417)
T 4fbw_A 166 SPILLQKGFTKLALYGISN----VR-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP--TSYLP------- 231 (417)
T ss_dssp CCEEEEETTEEEEEEEECC----CC-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSS--SSSCC-------
T ss_pred EeEEEEecCceEEEEeccC----Cc-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCC--cccCc-------
Confidence 012234444 45555542 11 2221 333322221 11 12345789999987643211 11100
Q ss_pred HHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeC
Q 017588 256 MEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNA 335 (369)
Q Consensus 256 l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~ 335 (369)
.-+...++|+++.||+|..+...... ..+++..+..|+.... .+... .....||.+|++.+
T Consensus 232 --~~l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~~-----s~~e~-------E~~~kg~~lvei~~- 292 (417)
T 4fbw_A 232 --ESFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSPG-------ETAPKHCGILNITG- 292 (417)
T ss_dssp --GGGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCHH-------HHSCCEEEEEEEET-
T ss_pred --hhHhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCcC-----CCccc-------cCCCCEEEEEEEEC-
Confidence 11445689999999999877552100 0235555666654322 11100 01245899999864
Q ss_pred ceEEEEEEEeCCCCCeeeEEEEEEe
Q 017588 336 THAQWTWHRNDDDKPIASDSIWLRS 360 (369)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~d~~~~~~ 360 (369)
..+.++++....-.+-+..++.+..
T Consensus 293 ~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 293 KDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CEEEEEEEECCCcccEEEEEEEeec
Confidence 4688898886554444555555543
No 25
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.34 E-value=1.9e-10 Score=108.55 Aligned_cols=242 Identities=15% Similarity=0.062 Sum_probs=126.5
Q ss_pred CCCeEEEEEeeCCCCCCc-------------HHHHHHHHhcCCCeEEeccccCCCCCChH-HHHHHHHhhHh--------
Q 017588 79 QLPIKFAIVGDLGQTGWT-------------NSTLQHVAKSNYDMLLLPGDLSYADLDQP-LWDSFGRMVEP-------- 136 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GD~~~~~~~~~-~~~~~~~~~~~-------- 136 (369)
...+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 578999999999986431 34556666889999999999998766532 22333333332
Q ss_pred ----h----------------------hcCCcEEEccCCCCCCCCCccccccccccccccccCcC----CCC-CCCc---
Q 017588 137 ----L----------------------ASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFE----ESG-SNSN--- 182 (369)
Q Consensus 137 ----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~----~~~-~~~~--- 182 (369)
| ...+|++++.||||..... .+......+..|.. +.. ...+
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~-----~~~s~~~LL~~~g~v~l~g~~~~~d~i~~ 228 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD-----GRYSALDILQVTGLVNYFGRVPENDNIVV 228 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC-------CCCHHHHHHHTTSCEECCCCSCSSSEEE
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccc-----ccccHHHHhccCCcEEEeCCcccCCceeE
Confidence 1 1268999999999994321 11000111111110 000 0000
Q ss_pred eeEEEEeCc--EEEEEecCCCCCCCChhH-HHHHHHHhcc-ccC---CCCCeEEEEeccCccccCCCCCCCcchHHHHHH
Q 017588 183 LYYSFDAAG--VHVVMLGSYTDFDQNSDQ-YKWLEADLNK-VDR---GKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKA 255 (369)
Q Consensus 183 ~~ys~~~g~--~~~i~lds~~~~~~~~~q-~~Wl~~~L~~-~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~ 255 (369)
....+.-|+ +.+.++.- .. .+. ..++.+.... ... ....+.|++.|......... ....
T Consensus 229 ~pv~l~kg~~~valyGl~y----~~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~--~yip------- 294 (472)
T 4fbk_A 229 SPILLQKGFTKLALYGISN----VR-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT--SYLP------- 294 (472)
T ss_dssp CCEEEEETTEEEEEEECCC----CC-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTT--SSCC-------
T ss_pred EEEEEEeCCceEEEEecCC----Cc-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCcc--ccCC-------
Confidence 012334454 44444432 11 222 1333322221 111 12346899999876433211 0000
Q ss_pred HHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEeC
Q 017588 256 MEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVNA 335 (369)
Q Consensus 256 l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~~ 335 (369)
.-+...++|+|+.||+|..+...... ..++...+..|+.... .+... + ....||.+|++.+
T Consensus 295 --e~ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~~~-----s~~e~--E-----~~~kg~~lveI~~- 355 (472)
T 4fbk_A 295 --ESFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSPG--E-----TAPKHCGILNITG- 355 (472)
T ss_dssp --GGGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCGG--G-----CSCCEEEEEEEET-
T ss_pred --hhhhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCcccc-----ccCcc--C-----CCCCEEEEEEEEC-
Confidence 11344579999999999877643100 0235555666653221 11100 0 0245899999864
Q ss_pred ceEEEEEEEeCCCCCeeeEEEEE
Q 017588 336 THAQWTWHRNDDDKPIASDSIWL 358 (369)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~d~~~~ 358 (369)
..+.++++....-.+-+..++.+
T Consensus 356 ~~v~ve~I~L~t~Rpf~~~~i~L 378 (472)
T 4fbk_A 356 KDFHLEKIRLRTVRPFIMKDIIL 378 (472)
T ss_dssp TEEEEEEEECSSSCCEEEEEEEG
T ss_pred CEEEEEEEECCCcccEEEEEEEE
Confidence 46889999876545445555554
No 26
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.32 E-value=1.4e-11 Score=103.97 Aligned_cols=141 Identities=16% Similarity=0.133 Sum_probs=85.5
Q ss_pred CeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCccc
Q 017588 81 PIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPIIH 159 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 159 (369)
.+||+++||+|.... .+++++.+...++|+|+++||+++. + ..+.++.+ ..|++.|+||||....
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~----~----~~~~l~~l--~~~~~~V~GNhD~~~~---- 90 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFENL--NANIIATYGNNDGERC---- 90 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGGC--SSEEEEECCTTCCCHH----
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH----H----HHHHHHhc--CCCEEEEeCCCcchHH----
Confidence 499999999994321 2345556666799999999999852 1 23334433 4799999999998411
Q ss_pred cccccccccccccCcCCCCCCCceeEEEEeCcEEEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEEEEeccCcccc
Q 017588 160 STKFTSYNARWRMPFEESGSNSNLYYSFDAAGVHVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNT 239 (369)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~ 239 (369)
.+ .+.+ .|.. ... + +.. . ..... ..++|+++|.|++.
T Consensus 91 --~~---~~~~-~~~~------~~~---------l--~~~-------~----------~~~~~--~~~~ill~Hg~~~~- 127 (190)
T 1s3l_A 91 --KL---KEWL-KDIN------EEN---------I--IDD-------F----------ISVEI--DDLKFFITHGHHQS- 127 (190)
T ss_dssp --HH---HHHH-HHHC------TTC---------E--EES-------E----------EEEEE--TTEEEEEEESCCHH-
T ss_pred --HH---HHHh-cccC------hhh---------h--ccc-------c----------eEEee--CCcEEEEECCChHH-
Confidence 11 1111 1110 000 0 000 0 00111 23589999988642
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhc-CceEEEecccccceeeeeccCCccCCCCceEEEECCCCC
Q 017588 240 NTAHQGEVESEGMRKAMEGLIHQA-RVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGN 302 (369)
Q Consensus 240 ~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~ 302 (369)
+.+.+.+. +++++++||+|..+... .+++.+|+.|+.|.
T Consensus 128 ----------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~~~ 167 (190)
T 1s3l_A 128 ----------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCG 167 (190)
T ss_dssp ----------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSC
T ss_pred ----------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcccc
Confidence 23345555 89999999999876554 25788899888654
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.31 E-value=5.2e-10 Score=105.24 Aligned_cols=241 Identities=12% Similarity=0.071 Sum_probs=126.8
Q ss_pred CCCeEEEEEeeCCCCCCc-------------HHHHHHHHhcCCCeEEeccccCCCCCC-hHHHHHHHHhhHhhh------
Q 017588 79 QLPIKFAIVGDLGQTGWT-------------NSTLQHVAKSNYDMLLLPGDLSYADLD-QPLWDSFGRMVEPLA------ 138 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GD~~~~~~~-~~~~~~~~~~~~~l~------ 138 (369)
...+||++++|+|.+... .++++.+.+.+||+||++||+++.... ......+.+.++++.
T Consensus 30 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~ 109 (431)
T 3t1i_A 30 ENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPV 109 (431)
T ss_dssp GGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCC
T ss_pred CCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcc
Confidence 678999999999976431 345556668899999999999987654 333444555555431
Q ss_pred ----------------------------cCCcEEEccCCCCCCCCCccccccccccc------cccccCcCCCCCCCc--
Q 017588 139 ----------------------------SQRPWMVTQGNHEIEKLPIIHSTKFTSYN------ARWRMPFEESGSNSN-- 182 (369)
Q Consensus 139 ----------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~-- 182 (369)
..+|++.+.||||...... .-....++ ..|.... ....
T Consensus 110 ~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~--~l~~~~lL~~~glv~~fg~~~----~~e~i~ 183 (431)
T 3t1i_A 110 QFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGAD--ALCALDILSCAGFVNHFGRSM----SVEKID 183 (431)
T ss_dssp CCEECSCC------------------CCBCSCEEECCCSSSCCBTTT--TBCHHHHHHHHTSEEECCCCC----CSSCEE
T ss_pred cceeccchhhccccccccccccccccccCCCcEEEEccCCCCccccc--ccCHHHHhccCCcEEEECCcC----ccccee
Confidence 2599999999999843211 00111111 1111000 0001
Q ss_pred -eeEEEEeCc--EEEEEecCCCCCCCChhHHH-HHHH-HhccccC---CCCCeEEEEeccCccccCCCCCCCcchHHHHH
Q 017588 183 -LYYSFDAAG--VHVVMLGSYTDFDQNSDQYK-WLEA-DLNKVDR---GKTPWIVVLIHAPWYNTNTAHQGEVESEGMRK 254 (369)
Q Consensus 183 -~~ys~~~g~--~~~i~lds~~~~~~~~~q~~-Wl~~-~L~~~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~ 254 (369)
....+.-|+ +.+.++.- .. .+.+. .+.+ .+..... ....+.|+++|......+.. ... .
T Consensus 184 ~~Pv~l~~g~~~valyGl~~----~~-~~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~---~~i----p- 250 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGLGS----IP-DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGST---NFI----P- 250 (431)
T ss_dssp ECCEEEEETTEEEEEEEECC----CC-HHHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSS---SSC----C-
T ss_pred eEEEEEecCCEeEEEEeCCC----CC-HHHHhhhhccccceeecccccCCCceEEEEECCCccCCCcc---ccC----C-
Confidence 012233354 55666632 11 22211 1111 1111111 12346899999875321110 100 0
Q ss_pred HHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEEECCCCCCCCccccCCCCCCCceeeEecccceEEEEEEe
Q 017588 255 AMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGNREGLASRFMNPQPAISVFREASFGHGQLEVVN 334 (369)
Q Consensus 255 ~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~g~~~l~v~~ 334 (369)
.-+...++|+++.||+|..+...... ..+++..+..|+.... .+... .....||.+|++.+
T Consensus 251 ---~~l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~~-----s~~e~-------E~~~k~~~lvei~~ 311 (431)
T 3t1i_A 251 ---EQFLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVVT-----SLSPG-------EAVKKHVGLLRIKG 311 (431)
T ss_dssp ---GGGSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSCC-----SCCHH-------HHSCCEEEEEEEET
T ss_pred ---HhHhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCccc-----CcCcc-------cCCCCEEEEEEEEC
Confidence 11334579999999999987643111 0135555666653221 11100 01235899999864
Q ss_pred CceEEEEEEEeCCCCCeeeEEEEE
Q 017588 335 ATHAQWTWHRNDDDKPIASDSIWL 358 (369)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~d~~~~ 358 (369)
..+.++++....-..-+..++.+
T Consensus 312 -~~~~ve~i~l~~~R~f~~~~v~l 334 (431)
T 3t1i_A 312 -RKMNMHKIPLHTVRQFFMEDIVL 334 (431)
T ss_dssp -TEEEEEEEECSSSCCEEEEEEEG
T ss_pred -CEEEEEEEECCCcceEEEEEEEE
Confidence 47889999865444334444444
No 28
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.30 E-value=1.4e-11 Score=113.45 Aligned_cols=72 Identities=21% Similarity=0.273 Sum_probs=53.7
Q ss_pred eEEEEEeeCCCCCCc--------------HHHHHHHHhcCCCeEEeccccCCCCCC-hHHHHHHHHhhHhhhc-CCcEEE
Q 017588 82 IKFAIVGDLGQTGWT--------------NSTLQHVAKSNYDMLLLPGDLSYADLD-QPLWDSFGRMVEPLAS-QRPWMV 145 (369)
Q Consensus 82 ~~f~~~gD~~~~~~~--------------~~~~~~i~~~~~d~vl~~GD~~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 145 (369)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 589999999987531 234445557899999999999986533 3345556666777654 589999
Q ss_pred ccCCCCCC
Q 017588 146 TQGNHEIE 153 (369)
Q Consensus 146 v~GNHD~~ 153 (369)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999984
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.12 E-value=1.3e-09 Score=93.35 Aligned_cols=71 Identities=17% Similarity=0.149 Sum_probs=48.4
Q ss_pred CeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCC---hHH--HHHHHHhhHhhhcCCcEEEccCCCCCC
Q 017588 81 PIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLD---QPL--WDSFGRMVEPLASQRPWMVTQGNHEIE 153 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~---~~~--~~~~~~~~~~l~~~~P~~~v~GNHD~~ 153 (369)
-++++++||+|.... .+++++.+...++|+|+++||+++.+.. ... -..+.+.++.+ ..|++.++||||..
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 489999999996432 2345555656789999999999975432 111 12334444444 25999999999983
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.95 E-value=3.4e-09 Score=103.33 Aligned_cols=186 Identities=15% Similarity=0.160 Sum_probs=93.5
Q ss_pred CCCeEEEEEeeCCCCCCc-----------HHHHHHHHhc----CC-CeEEeccccCCCCCChH--HHHHHHHhhHhhhcC
Q 017588 79 QLPIKFAIVGDLGQTGWT-----------NSTLQHVAKS----NY-DMLLLPGDLSYADLDQP--LWDSFGRMVEPLASQ 140 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~-----------~~~~~~i~~~----~~-d~vl~~GD~~~~~~~~~--~~~~~~~~~~~l~~~ 140 (369)
...++|++++|+|..... ...++++.+. ++ +++|.+||++....... ......+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---
Confidence 356899999999975321 2344555332 46 79999999985432111 112233445554
Q ss_pred CcEEEccCCCCCCCCCccccccccccccccccCcCC-------CC-CCCceeEEEEeCc--EEEEEecCCCC--CC-C--
Q 017588 141 RPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEE-------SG-SNSNLYYSFDAAG--VHVVMLGSYTD--FD-Q-- 205 (369)
Q Consensus 141 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~-~~~~~~ys~~~g~--~~~i~lds~~~--~~-~-- 205 (369)
-+-+.++||||+..... .+....+....|... .+ .....|..++.++ +.++.+.+... +. +
T Consensus 83 g~d~~~~GNHEfd~g~~----~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 83 GYDAMAIGNHEFDNPLT----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp TCCEEECCGGGGSSCHH----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred CCCEEeeccccccCCHH----HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 24467899999953211 111111111111110 00 0113455677887 45555544221 11 0
Q ss_pred --------ChhH-HHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccc
Q 017588 206 --------NSDQ-YKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAY 276 (369)
Q Consensus 206 --------~~~q-~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~ 276 (369)
..+. .+|+++ |++. .+.+.+|+++|.|............. ...+.+.+...++|++|+||.|..
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~----~~~la~~~~~~~iDlilgGHtH~~ 231 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEHGSNAPG----DVEMARALPAGSLAMIVGGHSQDP 231 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCCTTSCCC----HHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcccccCch----HHHHHHhCCCCceeEEECCCCCcc
Confidence 0122 234433 3321 13567999999997543221100011 123333333445999999999976
Q ss_pred ee
Q 017588 277 ER 278 (369)
Q Consensus 277 ~r 278 (369)
..
T Consensus 232 ~~ 233 (516)
T 1hp1_A 232 VC 233 (516)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 31
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.88 E-value=2.5e-09 Score=105.05 Aligned_cols=173 Identities=17% Similarity=0.112 Sum_probs=92.3
Q ss_pred CCCeEEEEEeeCCCCCC------------------cHHHHHHHHhcCCC-eEEeccccCCCCCChHH--HHHHHHhhHhh
Q 017588 79 QLPIKFAIVGDLGQTGW------------------TNSTLQHVAKSNYD-MLLLPGDLSYADLDQPL--WDSFGRMVEPL 137 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~------------------~~~~~~~i~~~~~d-~vl~~GD~~~~~~~~~~--~~~~~~~~~~l 137 (369)
...++|++++|+|.... ....++++.+.+|+ +++.+||++........ .....+.+..+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 46799999999995421 13355666667788 89999999975432111 12223333333
Q ss_pred hcCCcEEEccCCCCCCCCCccccccccccccccccCcCCC-----C-----CCCceeEEEEeCc--EEEEEecCCCC---
Q 017588 138 ASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEES-----G-----SNSNLYYSFDAAG--VHVVMLGSYTD--- 202 (369)
Q Consensus 138 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~-----~~~~~~ys~~~g~--~~~i~lds~~~--- 202 (369)
-+-+.++||||+..... .+..+.+....|.-.. . .....|..++.++ +.++.+.+...
T Consensus 107 ---g~d~~~lGNHEfd~g~~----~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~ 179 (552)
T 2z1a_A 107 ---RYRAMALGNHEFDLGPG----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREI 179 (552)
T ss_dssp ---TCCEEECCGGGGTTCHH----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHH
T ss_pred ---CCCccccccccccCCHH----HHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhc
Confidence 34478999999953211 1211111111111100 0 0123566678887 55555544210
Q ss_pred --CC------CChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh-cCceEEEeccc
Q 017588 203 --FD------QNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ-ARVGVVFAGHV 273 (369)
Q Consensus 203 --~~------~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~ 273 (369)
.. ...++.+...+.|++ .+.+.+|+++|.|.... ..+.++ .+||++|+||+
T Consensus 180 ~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d-----------------~~la~~~~gvDlIlgGHt 239 (552)
T 2z1a_A 180 SNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED-----------------LKLARRLVGVQVIVGGHS 239 (552)
T ss_dssp SCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH-----------------HHHHTTCSSCCEEEECSS
T ss_pred cCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH-----------------HHHHHhCCCccEEEeCCc
Confidence 00 011233333333443 13566999999985210 122233 48999999999
Q ss_pred cccee
Q 017588 274 HAYER 278 (369)
Q Consensus 274 H~~~r 278 (369)
|....
T Consensus 240 H~~~~ 244 (552)
T 2z1a_A 240 HTLLG 244 (552)
T ss_dssp CCCBS
T ss_pred Ccccc
Confidence 98654
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.87 E-value=1.6e-08 Score=98.65 Aligned_cols=203 Identities=18% Similarity=0.131 Sum_probs=101.8
Q ss_pred CCCeEEEEEeeCCCCCC-----------------cHHHHHHHHhcCCC-eEEeccccCCCCCChHH-------HHHHHHh
Q 017588 79 QLPIKFAIVGDLGQTGW-----------------TNSTLQHVAKSNYD-MLLLPGDLSYADLDQPL-------WDSFGRM 133 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vl~~GD~~~~~~~~~~-------~~~~~~~ 133 (369)
...++|+.++|+|.... ....++++.+.+++ ++|.+||++........ .....+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46899999999995421 12355666666676 77889999975422110 1223333
Q ss_pred hHhhhcCCcEEEccCCCCCCCCCccccccccccccccccCcCCC-----C--CCCceeEEEEeCcE--EEEEecCCCC--
Q 017588 134 VEPLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEES-----G--SNSNLYYSFDAAGV--HVVMLGSYTD-- 202 (369)
Q Consensus 134 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~--~~~~~~ys~~~g~~--~~i~lds~~~-- 202 (369)
+..+ -+-+.++||||+..... .+..+.+....|.... + .....|..++.+++ -||.+.+...
T Consensus 97 ln~l---g~D~~t~GNHefd~G~~----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~ 169 (527)
T 3qfk_A 97 YNRM---AFDFGTLGNHEFNYGLP----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPH 169 (527)
T ss_dssp HHHT---CCCEECCCGGGGTTCHH----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGG
T ss_pred HHhc---CCcEEeccccccccCHH----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCccc
Confidence 3333 23456899999853211 2222222111221100 0 01134666788884 4555544211
Q ss_pred CCC--------ChhHHHHHHHHhccccCCCCCeEEEEeccCccccCC-CC-----CCCcchHHHHHHHHHHHHhcCceEE
Q 017588 203 FDQ--------NSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNT-AH-----QGEVESEGMRKAMEGLIHQARVGVV 268 (369)
Q Consensus 203 ~~~--------~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~-----~~~~~~~~~~~~l~~l~~~~~v~lv 268 (369)
+.. .....+.+++.+++.+ .+.+.+|+++|.+.-.... .. .++.. ...+.+-+ ..+||++
T Consensus 170 ~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~----~~~la~~~-~~giDlI 243 (527)
T 3qfk_A 170 WEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE----GYAMLEAF-SKDIDIF 243 (527)
T ss_dssp TSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC----HHHHHHHH-GGGCSEE
T ss_pred ccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH----HHHHHHhc-CCCCcEE
Confidence 110 0122334444443333 2467799999977532210 00 11111 11222222 2589999
Q ss_pred EecccccceeeeeccCCccCCCCceEEEECCCCC
Q 017588 269 FAGHVHAYERFTRVSNGKPDNCGPVHITIGDGGN 302 (369)
Q Consensus 269 l~GH~H~~~r~~~~~~~~~~~~g~~~i~~G~gG~ 302 (369)
|+||+|...... -+++..+.+|+-|.
T Consensus 244 lgGHtH~~~~~~--------v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 244 ITGHQHRQIAER--------FKQTAVIQPGTRGT 269 (527)
T ss_dssp ECCSSCCEEEEE--------ETTEEEEEECSTTS
T ss_pred EECCCCcccceE--------ECCEEEeccChhhC
Confidence 999999865421 13566666665544
No 33
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.75 E-value=3.8e-08 Score=96.52 Aligned_cols=150 Identities=14% Similarity=0.084 Sum_probs=76.8
Q ss_pred HHHHHHhc--C--CC-eEEeccccCCCCCChHHH---HHHHHhhHhhhcCCcEEEccCCCCCCCCCcccccccccccccc
Q 017588 99 TLQHVAKS--N--YD-MLLLPGDLSYADLDQPLW---DSFGRMVEPLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARW 170 (369)
Q Consensus 99 ~~~~i~~~--~--~d-~vl~~GD~~~~~~~~~~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 170 (369)
.++++++. + || ++|.+||++..... ..+ ....+.+..+ ..+++ + ||||+.... +.+..+.+..
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~----~~l~~~l~~~ 180 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR----ERVEELLGLF 180 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH----HHHHHHHHHC
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCH----HHHHHHHHhC
Confidence 34555443 3 88 89999999975431 111 2334455555 46665 7 999994321 1222222222
Q ss_pred ccCcCCC-------C-CCCceeEEEEeCc--EEEEEecCCC-----------C--CCCChhHHHHHHHHhccccCCCCCe
Q 017588 171 RMPFEES-------G-SNSNLYYSFDAAG--VHVVMLGSYT-----------D--FDQNSDQYKWLEADLNKVDRGKTPW 227 (369)
Q Consensus 171 ~~p~~~~-------~-~~~~~~ys~~~g~--~~~i~lds~~-----------~--~~~~~~q~~Wl~~~L~~~~~~~~~~ 227 (369)
..|.-.. + .....|..++.++ +.++.+.+.. . +....+..+-+-+.|++ .+.+.
T Consensus 181 ~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~ 257 (562)
T 2wdc_A 181 RGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANA 257 (562)
T ss_dssp CSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSE
T ss_pred CCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCE
Confidence 2221110 0 0113455677887 5555554321 0 11112233222223332 24567
Q ss_pred EEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh-cCceEEEecccccce
Q 017588 228 IVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ-ARVGVVFAGHVHAYE 277 (369)
Q Consensus 228 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~~~ 277 (369)
+|+++|.|... . . .+.++ .+||++|+||.|...
T Consensus 258 iIvLsH~g~~~-------------d-~---~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 258 VVLLSHNGMQL-------------D-A---ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEEEECSCHHH-------------H-H---HHHTTSSSCCEEEECSSCCCC
T ss_pred EEEEeCCCCcc-------------h-H---HHHhcCCCCcEEEeCCCCCCC
Confidence 99999998521 0 1 23333 489999999999854
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.75 E-value=2.5e-08 Score=97.69 Aligned_cols=175 Identities=16% Similarity=0.173 Sum_probs=92.0
Q ss_pred CCCeEEEEEeeCCCCCC---------------------cHHHHHHHHhcCC-CeEEeccccCCCCCChHH--HHHHHHhh
Q 017588 79 QLPIKFAIVGDLGQTGW---------------------TNSTLQHVAKSNY-DMLLLPGDLSYADLDQPL--WDSFGRMV 134 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~-d~vl~~GD~~~~~~~~~~--~~~~~~~~ 134 (369)
..+++|+.++|+|.... ....++++.+.+| +++|.+||++........ .....+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45799999999985321 1234556666666 599999999975432111 12233444
Q ss_pred HhhhcCCcEEEccCCCCCCCCCcccccccc-ccccccccCcCCCC----C--------CCceeEEEEeCcEEE--EEecC
Q 017588 135 EPLASQRPWMVTQGNHEIEKLPIIHSTKFT-SYNARWRMPFEESG----S--------NSNLYYSFDAAGVHV--VMLGS 199 (369)
Q Consensus 135 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~~~p~~~~~----~--------~~~~~ys~~~g~~~~--i~lds 199 (369)
..+ ... +.++||||+.... +.+. .+.+....|..... . ....|.-++.+++++ |.+.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~----~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~ 175 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGV----EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTS 175 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHH----HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEEC
T ss_pred Hhc--CCc-EEeccCcccccCH----HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecc
Confidence 444 233 5789999994321 1121 22222222211000 0 123566678888554 45443
Q ss_pred CCC--C-CC-----ChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh-cCceEEEe
Q 017588 200 YTD--F-DQ-----NSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ-ARVGVVFA 270 (369)
Q Consensus 200 ~~~--~-~~-----~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~ 270 (369)
... + .+ .....+.+++.+++.+..+.+.+|+++|.+... ... +.++ .++|++|+
T Consensus 176 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------------d~~---la~~~~giDlIlg 238 (546)
T 4h2g_A 176 KETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------------DKL---IAQKVRGVDVVVG 238 (546)
T ss_dssp TTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------------HHH---HHHHSTTCCEEEC
T ss_pred cccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------------hHH---HHHhCCCCcEEEe
Confidence 210 0 00 012234444444433222456799999987421 111 2222 37999999
Q ss_pred cccccce
Q 017588 271 GHVHAYE 277 (369)
Q Consensus 271 GH~H~~~ 277 (369)
||+|...
T Consensus 239 GHtH~~~ 245 (546)
T 4h2g_A 239 GHSNTFL 245 (546)
T ss_dssp CSSCCCC
T ss_pred CCcCccc
Confidence 9999854
No 35
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.73 E-value=7.5e-09 Score=89.39 Aligned_cols=68 Identities=22% Similarity=0.213 Sum_probs=45.3
Q ss_pred CCCeEEEEEeeCCCCCC-cHHHHHHHHh-cCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCC
Q 017588 79 QLPIKFAIVGDLGQTGW-TNSTLQHVAK-SNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIE 153 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 153 (369)
....+++++||+|.... ..++++.+.. .++|.++++||+++.+.... +.++.+. ..+++.+.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~------~~~~~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLELIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHGGGG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH------HHHHHHh-cCCEEEEccCcHHH
Confidence 34688999999994422 1234444433 37899999999998665432 1222222 35899999999983
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.73 E-value=5.2e-08 Score=94.66 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=91.1
Q ss_pred CCeEEEEEeeCCCCCCc-------------------HHHHHHHHhcCCCeEEe-ccccCCCCCChH--HHHHHHHhhHhh
Q 017588 80 LPIKFAIVGDLGQTGWT-------------------NSTLQHVAKSNYDMLLL-PGDLSYADLDQP--LWDSFGRMVEPL 137 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~-------------------~~~~~~i~~~~~d~vl~-~GD~~~~~~~~~--~~~~~~~~~~~l 137 (369)
..++|+.++|+|..... ...++++.+.+++.+++ +||++....... ......+.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~- 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNT- 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTT-
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHh-
Confidence 46899999999853210 23556666778887766 999997421111 01122222222
Q ss_pred hcCCcEEEccCCCCCCCCCccccccccccccccccCcCC-------CCCC--CceeEEEEeCcE--EEEEecCC-----C
Q 017588 138 ASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEE-------SGSN--SNLYYSFDAAGV--HVVMLGSY-----T 201 (369)
Q Consensus 138 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~--~~~~ys~~~g~~--~~i~lds~-----~ 201 (369)
--+-++++||||+..... .+..+.+....|.-. .+.+ ...|..++.+++ -|+.+-+. .
T Consensus 84 --lg~D~~tlGNHEfd~G~~----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~ 157 (509)
T 3ive_A 84 --MPFDAVTIGNHEFDHGWD----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDT 157 (509)
T ss_dssp --SCCSEECCCGGGGTTCHH----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred --cCCcEEeecccccccCHH----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccc
Confidence 245567899999853211 121111111111110 0100 234566788884 55555321 0
Q ss_pred CC---C---CChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh-cCceEEEecccc
Q 017588 202 DF---D---QNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ-ARVGVVFAGHVH 274 (369)
Q Consensus 202 ~~---~---~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H 274 (369)
.+ . ......+.+++.+++.+. +.+.+|+++|.+.-............... ..-..+.++ .++|++|+||.|
T Consensus 158 ~~~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~-~~d~~la~~~~giDlIlgGHtH 235 (509)
T 3ive_A 158 VSAATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRAL-DKDIQTASQVKGLDILITGHAH 235 (509)
T ss_dssp SCGGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCC-HHHHHHHHHCSSCCEEEEESSC
T ss_pred cccccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCcccccccccccccc-chHHHHHhcCCCCcEEEeCCcC
Confidence 00 0 012234445554444443 36779999998742211100000000000 011223333 379999999999
Q ss_pred cc
Q 017588 275 AY 276 (369)
Q Consensus 275 ~~ 276 (369)
..
T Consensus 236 ~~ 237 (509)
T 3ive_A 236 VG 237 (509)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 37
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.71 E-value=5.2e-08 Score=96.06 Aligned_cols=174 Identities=16% Similarity=0.154 Sum_probs=90.9
Q ss_pred CCeEEEEEeeCCCCCCc----------------------HHHHHHHHhcCCC-eEEeccccCCCCCChH--HHHHHHHhh
Q 017588 80 LPIKFAIVGDLGQTGWT----------------------NSTLQHVAKSNYD-MLLLPGDLSYADLDQP--LWDSFGRMV 134 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~----------------------~~~~~~i~~~~~d-~vl~~GD~~~~~~~~~--~~~~~~~~~ 134 (369)
-+++|+.++|+|..... ...++++.+.+++ ++|.+||++....... ......+.|
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 35899999999854211 2345556556666 8999999997542111 112223444
Q ss_pred HhhhcCCcEEEccCCCCCCCCCccccccccccccccccCcCC------CCC----CCceeEEEEeCc--EEEEEecC-C-
Q 017588 135 EPLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEE------SGS----NSNLYYSFDAAG--VHVVMLGS-Y- 200 (369)
Q Consensus 135 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~----~~~~~ys~~~g~--~~~i~lds-~- 200 (369)
..+ -+-++++||||+.... +.+..+.+....|... .+. ....|--++.++ +-||.+.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~ 163 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNK 163 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHH
T ss_pred Hhc---CcCeeeccccccccCH----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCc
Confidence 444 2335789999995321 1222222221222110 000 113456678888 55566633 1
Q ss_pred ----CCCCC---ChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh-cCceEEEecc
Q 017588 201 ----TDFDQ---NSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ-ARVGVVFAGH 272 (369)
Q Consensus 201 ----~~~~~---~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH 272 (369)
..... .....+-+++.+++.+..+.+.+|+++|.+... .. .+.++ .+||++|+||
T Consensus 164 ~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------------d~---~la~~~~giDlIlgGH 226 (579)
T 3ztv_A 164 TVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------------NI---EIAQKVNDIDVIVTGD 226 (579)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------------HH---HHHHHCSSCCEEEECS
T ss_pred cccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------------hH---HHHHhCCCCCEEEeCC
Confidence 00011 112233444444444333456799999987421 11 12222 3799999999
Q ss_pred cccce
Q 017588 273 VHAYE 277 (369)
Q Consensus 273 ~H~~~ 277 (369)
+|...
T Consensus 227 tH~~~ 231 (579)
T 3ztv_A 227 SHYLY 231 (579)
T ss_dssp SCCEE
T ss_pred CCccc
Confidence 99866
No 38
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.50 E-value=3.3e-06 Score=73.32 Aligned_cols=180 Identities=14% Similarity=0.199 Sum_probs=94.6
Q ss_pred eEEEEEeeCCCCCCc----HHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCc
Q 017588 82 IKFAIVGDLGQTGWT----NSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPI 157 (369)
Q Consensus 82 ~~f~~~gD~~~~~~~----~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 157 (369)
+|++++||.= +... ...++++.+.. |++|..|..+..+..-. ....+.+..+ ..-.+ +.||||++...
T Consensus 1 m~ilfiGDi~-g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~--G~D~~-T~GNHefD~~~- 72 (252)
T 2z06_A 1 MRVLFIGDVM-AEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREA--GVDLV-SLGNHAWDHKE- 72 (252)
T ss_dssp CEEEEECCBC-HHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHH--TCCEE-ECCTTTTSCTT-
T ss_pred CEEEEEEecC-CcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhC--CCCEE-EeccEeeECch-
Confidence 5899999982 1112 34555665566 99888777765443211 1222334433 34554 78999996421
Q ss_pred cccccccccccc--cccCcCC-CCCCCceeEEEEeCcEEEEEec--CCCCCCCChhHHHHHHHHhccccCCCCCeEEEEe
Q 017588 158 IHSTKFTSYNAR--WRMPFEE-SGSNSNLYYSFDAAGVHVVMLG--SYTDFDQNSDQYKWLEADLNKVDRGKTPWIVVLI 232 (369)
Q Consensus 158 ~~~~~~~~~~~~--~~~p~~~-~~~~~~~~ys~~~g~~~~i~ld--s~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~ 232 (369)
...|.+. .-.|.+- .+.+...|..++.++.++-+++ +.........-.+-+++.+++.+ .+.+|+.+
T Consensus 73 -----l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~ 144 (252)
T 2z06_A 73 -----VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEV 144 (252)
T ss_dssp -----HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEE
T ss_pred -----HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 1112211 1112221 1122356777888886665554 32211112222333455555442 56799999
Q ss_pred ccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEE
Q 017588 233 HAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHIT 296 (369)
Q Consensus 233 H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~ 296 (369)
|.-. . ...+.+. ..-..+||+|+.||+|.......+ -++|+.||+
T Consensus 145 H~g~-----------t--sek~~la-~~~dg~Vd~VvGgHTHv~t~d~~i-----l~~gt~~it 189 (252)
T 2z06_A 145 HAEA-----------T--SEKMALA-HYLDGRASAVLGTHTHVPTLDATR-----LPKGTLYQT 189 (252)
T ss_dssp ECSC-----------H--HHHHHHH-HHHBTTBSEEEEESSCSCBSCCEE-----CTTSCEEES
T ss_pred CCCc-----------H--HHHHHHH-HhCCCCeEEEEcCCCCcCCCccEE-----cCCCcEeec
Confidence 9532 1 1112222 222346999999999985433222 257888876
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.49 E-value=3.4e-06 Score=74.60 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=97.9
Q ss_pred CCeEEEEEeeCCCCCCc---HHHHHHHHhc-CCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCC
Q 017588 80 LPIKFAIVGDLGQTGWT---NSTLQHVAKS-NYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKL 155 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~---~~~~~~i~~~-~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 155 (369)
..+||+++||.+..... ...++++.+. ++|+++..||.+..+..- .....+.+..+ ..-. .++||||++..
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~--G~Da-~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEA--GVNY-ITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHH--TCCE-EECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhc--CCCE-EEEccCcccCC
Confidence 36899999999733211 2234444433 689999999998755321 12223334433 2333 57899999643
Q ss_pred Cccccccccccccc--c----ccCcCCCC-CCCceeEEEEeCcE--EEEEecCCCCCC--CChhHHHHHHHHhccccCCC
Q 017588 156 PIIHSTKFTSYNAR--W----RMPFEESG-SNSNLYYSFDAAGV--HVVMLGSYTDFD--QNSDQYKWLEADLNKVDRGK 224 (369)
Q Consensus 156 ~~~~~~~~~~~~~~--~----~~p~~~~~-~~~~~~ys~~~g~~--~~i~lds~~~~~--~~~~q~~Wl~~~L~~~~~~~ 224 (369)
.. ...|.+. . +.|..... ..+..|..++.+++ .+|.+-+...+. ....-.+.+++.++ +.+
T Consensus 78 ~~-----~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~ 149 (281)
T 1t71_A 78 LD-----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRD 149 (281)
T ss_dssp GG-----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCC
T ss_pred cc-----HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcC
Confidence 11 1111111 1 12221100 02345667888874 455554432122 12233445666665 235
Q ss_pred CCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEE
Q 017588 225 TPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHIT 296 (369)
Q Consensus 225 ~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~ 296 (369)
.+.+|+.+|.-. . ...+.+.. .-..+||+++.||+|.......+. ++|+.||+
T Consensus 150 ~diIIv~~H~g~-----------t--~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~il-----~~gt~~i~ 202 (281)
T 1t71_A 150 CDLHIVDFHAET-----------T--SEKNAFCM-AFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYIT 202 (281)
T ss_dssp CSEEEEEEECSC-----------H--HHHHHHHH-HHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEES
T ss_pred CCEEEEEeCCCc-----------h--HHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEe-----cCCcEEEe
Confidence 778999999521 1 11122222 123469999999999765432221 46888876
No 40
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=98.46 E-value=6.1e-06 Score=71.96 Aligned_cols=180 Identities=19% Similarity=0.174 Sum_probs=95.5
Q ss_pred eEEEEEeeCCCCCCc----HHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCc
Q 017588 82 IKFAIVGDLGQTGWT----NSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPI 157 (369)
Q Consensus 82 ~~f~~~gD~~~~~~~----~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 157 (369)
+|++++||.= +... ...++++.+.. |++|..|+.+..+..-. ....+.+..+ ..-. .+.||||++...
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~--G~Da-~TlGNHefD~~~- 72 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEA--GAGC-LTLGNHAWHHKD- 72 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHH--TCSE-EECCTTTTSSTT-
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhC--CCCE-EEeccccccCch-
Confidence 5899999982 2222 33455555555 99988888886553211 1122333333 3444 477999996321
Q ss_pred ccccccccccc----ccccCcCC--CCCCCceeEEEEeCcE--EEEEecCCCCCCCChhHHHHHHHHhccccCCCCCeEE
Q 017588 158 IHSTKFTSYNA----RWRMPFEE--SGSNSNLYYSFDAAGV--HVVMLGSYTDFDQNSDQYKWLEADLNKVDRGKTPWIV 229 (369)
Q Consensus 158 ~~~~~~~~~~~----~~~~p~~~--~~~~~~~~ys~~~g~~--~~i~lds~~~~~~~~~q~~Wl~~~L~~~~~~~~~~~i 229 (369)
...+.+ +.-.|.+- .+.++..|.-++.++. .++.|-+.........-.+-+++.+++. +.+.+|
T Consensus 73 -----l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~II 144 (255)
T 1t70_A 73 -----IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVF 144 (255)
T ss_dssp -----HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEE
T ss_pred -----HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEE
Confidence 111111 11112221 1223356667888874 4555544322112233344566666655 467799
Q ss_pred EEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccccceeeeeccCCccCCCCceEEE
Q 017588 230 VLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHAYERFTRVSNGKPDNCGPVHIT 296 (369)
Q Consensus 230 v~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~~~r~~~~~~~~~~~~g~~~i~ 296 (369)
+.+|.-. . ...+.+.. .-..+||+++.||+|.......+. ++|+.|++
T Consensus 145 v~~H~e~-----------t--~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~ 192 (255)
T 1t70_A 145 VDFHAEA-----------T--SEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQT 192 (255)
T ss_dssp EEEECSC-----------H--HHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEES
T ss_pred EEeCCCC-----------h--HHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEE
Confidence 9999421 1 11222222 223469999999999765432221 46888776
No 41
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.44 E-value=3.4e-06 Score=82.40 Aligned_cols=181 Identities=18% Similarity=0.133 Sum_probs=88.7
Q ss_pred CCCeEEEEEeeCCCCCC--------------cHHHHHHHH----hcCCC-eEEeccccCCCCCChH----HHHHHHHhhH
Q 017588 79 QLPIKFAIVGDLGQTGW--------------TNSTLQHVA----KSNYD-MLLLPGDLSYADLDQP----LWDSFGRMVE 135 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~----~~~~d-~vl~~GD~~~~~~~~~----~~~~~~~~~~ 135 (369)
...++|+.++|+|.... ..++...++ +.+++ ++|.+||++....... ......+.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 46899999999986421 112223332 35788 5799999996432111 0111122233
Q ss_pred hhhcCCcEEEccCCCCCCCCCccccccccccccccccCcCCC--------CC---CCceeEEEEe--Cc--EEEEEecCC
Q 017588 136 PLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFEES--------GS---NSNLYYSFDA--AG--VHVVMLGSY 200 (369)
Q Consensus 136 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~---~~~~~ys~~~--g~--~~~i~lds~ 200 (369)
.+ -.=++++||||+...... ...+....+....|.... +. ....|.-++. ++ +.||.+.+.
T Consensus 93 ~l---g~Da~tlGNHEfD~G~~~-l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~ 168 (557)
T 3c9f_A 93 KQ---DYDLLTIGNHELYLWENS-KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFD 168 (557)
T ss_dssp TS---CCSEECCCGGGSSSHHHH-HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCC
T ss_pred hc---CCCEEeecchhcccchHH-HHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecC
Confidence 22 234568999999532110 001111111111121110 10 1134556777 77 455555432
Q ss_pred CCCC------CChhH--H-HHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHh--cCceE-E
Q 017588 201 TDFD------QNSDQ--Y-KWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQ--ARVGV-V 268 (369)
Q Consensus 201 ~~~~------~~~~q--~-~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~v~l-v 268 (369)
.... ....+ . +|+++.+++ +.+.+|+++|.+.-... . .. ......+.+ .++|+ +
T Consensus 169 ~~~~~~~~~~~d~~e~i~~~~v~~l~~~----~~D~IIvL~H~G~~~~~----d-----~~-~~~~~~lA~~~~giDilI 234 (557)
T 3c9f_A 169 FKRFNSGTRVTPMAETIHEPWFQEALKH----EVDLIIIVGHTPISHNW----G-----EF-YQVHQYLRQFFPDTIIQY 234 (557)
T ss_dssp CCCCCTTEEECCHHHHTTSHHHHHHTTS----CCSEEEEECSSCCCTTT----C-----HH-HHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCcEECCHHHHHHHHHHHHHHhc----CCCEEEEecccCccccC----c-----cc-cHHHHHHHHhCCCCCEEE
Confidence 1100 01111 1 466665432 46779999998852000 0 11 222223333 48994 9
Q ss_pred Eecccccce
Q 017588 269 FAGHVHAYE 277 (369)
Q Consensus 269 l~GH~H~~~ 277 (369)
|.||.|...
T Consensus 235 lgGHtH~~~ 243 (557)
T 3c9f_A 235 FGGHSHIRD 243 (557)
T ss_dssp EECSSCCEE
T ss_pred ECCCCCCCC
Confidence 999999874
No 42
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.44 E-value=9.9e-07 Score=80.91 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=28.4
Q ss_pred CCeEEEEEeeCCCCCCc-----------------HHHHHHHHhcCCC-eEEeccccCCCC
Q 017588 80 LPIKFAIVGDLGQTGWT-----------------NSTLQHVAKSNYD-MLLLPGDLSYAD 121 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~-----------------~~~~~~i~~~~~d-~vl~~GD~~~~~ 121 (369)
-.++|+..+|+|..... ...++++.+..++ ++|.+||++...
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs 69 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN 69 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc
Confidence 46899999999864221 2345555555565 678899999643
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.14 E-value=1.7e-05 Score=72.55 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=41.8
Q ss_pred CCeEEEEEeeCCCCCCc-----------------HHHHHHHHhcCCC-eEEeccccCCCCCChHHHHHHH-------Hhh
Q 017588 80 LPIKFAIVGDLGQTGWT-----------------NSTLQHVAKSNYD-MLLLPGDLSYADLDQPLWDSFG-------RMV 134 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~-----------------~~~~~~i~~~~~d-~vl~~GD~~~~~~~~~~~~~~~-------~~~ 134 (369)
-.++|+..+|+|..... ...++++.+..++ ++|.+||++..... ..+.... ..+
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 36899999999864221 2355666666665 77899999964321 1111110 011
Q ss_pred HhhhcC-CcEEEccCCCCCCC
Q 017588 135 EPLASQ-RPWMVTQGNHEIEK 154 (369)
Q Consensus 135 ~~l~~~-~P~~~v~GNHD~~~ 154 (369)
-.++.. -.=+.++||||+..
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTT
T ss_pred HHHHHhcCCCEEecchhhhhc
Confidence 122222 23356789999953
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=98.09 E-value=3.1e-05 Score=75.50 Aligned_cols=170 Identities=16% Similarity=0.179 Sum_probs=85.2
Q ss_pred CeEEEEEeeCCCCCC---------------------cHHHHHHHHhcCCC-eEEeccccCCCCCChHHH--HHHHHhhHh
Q 017588 81 PIKFAIVGDLGQTGW---------------------TNSTLQHVAKSNYD-MLLLPGDLSYADLDQPLW--DSFGRMVEP 136 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~d-~vl~~GD~~~~~~~~~~~--~~~~~~~~~ 136 (369)
.++|+..+|+|..-. ....++++.+.+++ ++|.+||++......... ....+.|..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999984321 02345555555665 678899999754321111 111223333
Q ss_pred hhcCCcEEEccCCCCCCCCCccccccc-cccccccccCcCCC------------CCCCceeEEEEeCcEE--EEEecCCC
Q 017588 137 LASQRPWMVTQGNHEIEKLPIIHSTKF-TSYNARWRMPFEES------------GSNSNLYYSFDAAGVH--VVMLGSYT 201 (369)
Q Consensus 137 l~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~~~p~~~~------------~~~~~~~ys~~~g~~~--~i~lds~~ 201 (369)
+ -.=..++||||+..... .+ ..+.+....|.-.. ...-..|.-++.++++ ||.+-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~----~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~ 155 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKE 155 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH----HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTT
T ss_pred c---CCCEEEEchhhhccCHH----HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccc
Confidence 2 23357899999964322 11 11111111221100 0111356667888855 45544311
Q ss_pred -----C------CCCChhHHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhc-CceEEE
Q 017588 202 -----D------FDQNSDQYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQA-RVGVVF 269 (369)
Q Consensus 202 -----~------~~~~~~q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl 269 (369)
. +...-+..+..-+.|++ .+.+.+|+++|...- .-. .+.++. ++|++|
T Consensus 156 ~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------------~d~---~la~~v~giD~Il 215 (530)
T 4h1s_A 156 TPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------------MDK---LIAQKVRGVDVVV 215 (530)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------------HHH---HHHHHSTTCCEEE
T ss_pred eeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------------HHH---HHHhcCCCCCeec
Confidence 0 01111222223333433 245669999996531 001 223333 899999
Q ss_pred ecccccce
Q 017588 270 AGHVHAYE 277 (369)
Q Consensus 270 ~GH~H~~~ 277 (369)
.||+|..-
T Consensus 216 gGHsH~~~ 223 (530)
T 4h1s_A 216 GGHSNTFL 223 (530)
T ss_dssp CCSSCCCB
T ss_pred cCCcccee
Confidence 99999754
No 45
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.62 E-value=3.3e-05 Score=68.78 Aligned_cols=67 Identities=24% Similarity=0.239 Sum_probs=43.7
Q ss_pred eEEEEEeeCCCCCC-cHHHHHHHHh-cCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCC
Q 017588 82 IKFAIVGDLGQTGW-TNSTLQHVAK-SNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIE 153 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 153 (369)
++++++||+|.... ..++++.+.. .++|.++++||+++.+..... ..+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~---~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLD---VLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHH---HHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHH---HHHHHHhCC--CceEEEECCCcHH
Confidence 47899999995422 2334444433 468999999999987654322 223333332 3899999999983
No 46
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.58 E-value=3.8e-05 Score=67.78 Aligned_cols=66 Identities=24% Similarity=0.217 Sum_probs=43.2
Q ss_pred CeEEEEEeeCCCCCC-cHHHHHHHHhcCC-CeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCCC
Q 017588 81 PIKFAIVGDLGQTGW-TNSTLQHVAKSNY-DMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEIE 153 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 153 (369)
..+++++||+|.... ..++++.+....+ |.+|++||+++.+..... ..+.+.. .+++.++||||..
T Consensus 18 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~---~l~~l~~----~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 18 TGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFG---VVRLLKR----LGAYSVLGNHDAK 85 (262)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHH---HHHHHHH----HTCEECCCHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHH---HHHHHHH----CCCEEEeCcChHH
Confidence 348999999994321 2334444444444 999999999987654321 2222322 4799999999983
No 47
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.35 E-value=0.00016 Score=64.99 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=44.3
Q ss_pred CeEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhc--CCcEEEccCCCCCC
Q 017588 81 PIKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLAS--QRPWMVTQGNHEIE 153 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 153 (369)
..+++++||+|.... ..++++.+.....+.++++||+++.+....+. ...+..+.. ...++.+.||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~ev---l~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVET---VTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHHH---HHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHHH---HHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 356899999995422 23344444345668899999999977653321 222333221 23599999999985
No 48
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.29 E-value=0.00038 Score=63.76 Aligned_cols=72 Identities=14% Similarity=-0.009 Sum_probs=45.1
Q ss_pred CCCeEEEEEeeCCCCCC-cHHHHHHHHhc--------CCCeEEeccccCCCCCChHHHHHHHHhhHhh-----hcCCcEE
Q 017588 79 QLPIKFAIVGDLGQTGW-TNSTLQHVAKS--------NYDMLLLPGDLSYADLDQPLWDSFGRMVEPL-----ASQRPWM 144 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~--------~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l-----~~~~P~~ 144 (369)
....+++++||+|.... ..++++.+... ++|.++++||+++.+..... ....+..+ ....+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 45789999999994422 12233332211 47999999999987764322 12222222 1235799
Q ss_pred EccCCCCCC
Q 017588 145 VTQGNHEIE 153 (369)
Q Consensus 145 ~v~GNHD~~ 153 (369)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999983
No 49
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=97.15 E-value=0.00054 Score=62.08 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=43.8
Q ss_pred eEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhh--hcCCcEEEccCCCCCC
Q 017588 82 IKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPL--ASQRPWMVTQGNHEIE 153 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 153 (369)
.+++++||+|.... ..++++.+.....+-+|++||+++.+....+ ....+..+ .....++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceEEecCCchHh
Confidence 46899999995432 2334444444556889999999997764322 12222222 1234689999999984
No 50
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=97.04 E-value=0.00079 Score=59.99 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=42.9
Q ss_pred EEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhh--hcCCcEEEccCCCCCC
Q 017588 83 KFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPL--ASQRPWMVTQGNHEIE 153 (369)
Q Consensus 83 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 153 (369)
+++++||+|.... ..++++.+.....+-++++||+++.+....+- ...+..+ .....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~ev---l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLET---ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHH---HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHH---HHHHHHHHhhCCCcEEEEecCchhh
Confidence 5899999995532 23344444345567899999999987653221 1222222 2234689999999983
No 51
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.0013 Score=59.54 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=44.4
Q ss_pred CCCeEEEEEeeCCCCCC-cHHHHHHHHhcCC-CeEEeccccCCCCCChHHHHHHHHhhHhhh--cCCcEEEccCCCCCC
Q 017588 79 QLPIKFAIVGDLGQTGW-TNSTLQHVAKSNY-DMLLLPGDLSYADLDQPLWDSFGRMVEPLA--SQRPWMVTQGNHEIE 153 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 153 (369)
....+++++||+|.... ..++++.+..... +.+|++||+++.+....+- ...+..+. ....++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~ev---l~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEV---ALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHH---HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHH---HHHHHHHhhhCCCcEEEecCchhhh
Confidence 36789999999995532 2334444333323 4699999999987653221 12222221 124589999999973
No 52
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=97.01 E-value=0.00097 Score=59.88 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=43.0
Q ss_pred CCeEEEEEeeCCCCCC-cHHHHHHHHhc-CCCeEEeccccCCCCCChHHHHHHHHhhHhhh--cCCcEEEccCCCCCC
Q 017588 80 LPIKFAIVGDLGQTGW-TNSTLQHVAKS-NYDMLLLPGDLSYADLDQPLWDSFGRMVEPLA--SQRPWMVTQGNHEIE 153 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 153 (369)
...+++++||+|.... ..++++.+... ..+.++++||+++.+....+- ...+..+. ....++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~ev---l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEV---ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHH---HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHH---HHHHHHhhhhcCCcEEEEecCcccc
Confidence 4678999999995522 22333333222 235699999999987653221 12222221 124688999999973
No 53
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.01 E-value=0.015 Score=54.97 Aligned_cols=138 Identities=14% Similarity=0.142 Sum_probs=79.8
Q ss_pred CCCeEEEEEeeCCCCCCc---HH----HHHHHH-----------hcCCCeEEeccccCCCCCC-----------------
Q 017588 79 QLPIKFAIVGDLGQTGWT---NS----TLQHVA-----------KSNYDMLLLPGDLSYADLD----------------- 123 (369)
Q Consensus 79 ~~~~~f~~~gD~~~~~~~---~~----~~~~i~-----------~~~~d~vl~~GD~~~~~~~----------------- 123 (369)
..+..++++||.|.+... .. +++.+. ..+...+|++||.+...+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 356799999999987753 11 222221 3467899999999976421
Q ss_pred --hHHHHHHHHhhHhhhcCCcEEEccCCCCCCCCCccccccccccccccccCcC-CCCCCCceeEEEEeCcEEEEEecCC
Q 017588 124 --QPLWDSFGRMVEPLASQRPWMVTQGNHEIEKLPIIHSTKFTSYNARWRMPFE-ESGSNSNLYYSFDAAGVHVVMLGSY 200 (369)
Q Consensus 124 --~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~~~~i~lds~ 200 (369)
....+.+.+.+..+...+|+..+|||||-... ...++.+.. ..|..... ..-..-..-|.+++++++|++....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCC
Confidence 02334455667777788999999999998532 211112111 01100000 0000012345689999999988652
Q ss_pred C-----CCCCChhHHHHHHHHhcc
Q 017588 201 T-----DFDQNSDQYKWLEADLNK 219 (369)
Q Consensus 201 ~-----~~~~~~~q~~Wl~~~L~~ 219 (369)
. .+...+.-++.++..|+.
T Consensus 355 nidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 355 NVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHH
Confidence 1 122234567788888876
No 54
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.90 E-value=0.0012 Score=60.13 Aligned_cols=69 Identities=14% Similarity=0.110 Sum_probs=43.3
Q ss_pred eEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhh--cCCcEEEccCCCCCC
Q 017588 82 IKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLA--SQRPWMVTQGNHEIE 153 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 153 (369)
.+++++||+|.... ..++++.......+-++++||+++.+....+- ...+..+. ....++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Ev---l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIEC---VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHH---HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHH---HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999986532 23344433345668899999999987653221 12222221 124589999999983
No 55
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.75 E-value=0.0018 Score=62.07 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=43.3
Q ss_pred CCeEEEEEeeCCCCCC-cHHHHHHHHhcC-CCeEEeccccCCCCCChHHHHHHHHhhHh--hhcCCcEEEccCCCCC
Q 017588 80 LPIKFAIVGDLGQTGW-TNSTLQHVAKSN-YDMLLLPGDLSYADLDQPLWDSFGRMVEP--LASQRPWMVTQGNHEI 152 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~-~d~vl~~GD~~~~~~~~~~~~~~~~~~~~--l~~~~P~~~v~GNHD~ 152 (369)
...+++++||+|.... ..++++.+.... .+.+|++||+++.+..... . ...+.. +.....++.+.||||.
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e--~-~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE--V-ILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH--H-HHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHH--H-HHHHHHHHhhCCCceEeecCCccH
Confidence 4688999999995422 223333333222 3569999999997764322 1 122222 2224679999999997
No 56
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.67 E-value=0.0014 Score=62.23 Aligned_cols=69 Identities=14% Similarity=0.110 Sum_probs=42.2
Q ss_pred eEEEEEeeCCCCCC-cHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhh--cCCcEEEccCCCCCC
Q 017588 82 IKFAIVGDLGQTGW-TNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLA--SQRPWMVTQGNHEIE 153 (369)
Q Consensus 82 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 153 (369)
.+++++||+|.... ..++++.......+-+|++||+++.+....+- ...+..+. ..-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Ev---l~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIEC---VLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHH---HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHH---HHHHHHHhhhCCCeEEEecCCccHH
Confidence 46899999995432 22333322234468899999999987653321 12222221 124589999999973
No 57
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.24 E-value=0.0074 Score=44.59 Aligned_cols=32 Identities=34% Similarity=0.400 Sum_probs=26.3
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..++|++|+|+|.|.+||..- .|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 457899999999999999752 46777888876
No 58
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.30 E-value=0.043 Score=40.52 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=27.0
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|++|+|++.|.+||..- .|....|+|++.
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCT
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCC
Confidence 357899999999999999752 567888998775
No 59
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.24 E-value=0.014 Score=44.13 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=41.3
Q ss_pred CEEEEEeCCC-----CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC------CCC
Q 017588 1 MRLSWITENS-----SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD------SAQ 69 (369)
Q Consensus 1 m~v~W~t~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~------~s~ 69 (369)
|+|.|..... ..-.|+|.......+...... ++-...++|.+|+|++.|.+||... ...
T Consensus 24 v~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS 93 (114)
T 2kbg_A 24 FKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKV----------QGNKDHIILEHLQWTMGYEVQITAANRLGYSEPT 93 (114)
T ss_dssp EEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEE----------ETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEc----------CCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCc
Confidence 4788975432 334778887643333322111 1122357899999999999999863 122
Q ss_pred eeEEECCCC
Q 017588 70 ERSFKTPPA 78 (369)
Q Consensus 70 ~~~F~t~~~ 78 (369)
...|+|.+.
T Consensus 94 ~~~~~T~~~ 102 (114)
T 2kbg_A 94 VYEFSMPPK 102 (114)
T ss_dssp EEEECCCCC
T ss_pred CCEEEcCCC
Confidence 457888664
No 60
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.15 E-value=0.065 Score=40.76 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=26.4
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|+||+|+|.|.++|..- +|....|+|.+.
T Consensus 78 ~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 78 LSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred eEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 357899999999999999752 567778888653
No 61
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.95 E-value=0.061 Score=39.84 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=27.1
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
...++|++|+|+|.|.+||..- .|....|+|.+.
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 68 RLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred ceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 3457899999999999999752 467778888764
No 62
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=94.84 E-value=0.092 Score=38.52 Aligned_cols=31 Identities=23% Similarity=0.158 Sum_probs=25.0
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
.++|++|+|+|.|.+||..- .|....++|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 67899999999999999762 46677788754
No 63
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.79 E-value=0.056 Score=39.70 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|++|+|+|.|.++|..- .|....|+|++.
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCC
Confidence 356789999999999999763 466778888775
No 64
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.78 E-value=0.056 Score=39.83 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=24.8
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.++|++|+|++.|.|||..- .|....++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 46788999999999999863 355667777653
No 65
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.48 E-value=0.086 Score=39.44 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=26.6
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
...+.|++|+|+|.|.+||..- .+....|+|.+.
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 4467899999999999999752 366777888653
No 66
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.44 E-value=0.088 Score=39.15 Aligned_cols=33 Identities=15% Similarity=0.009 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|++|+|+|.|.++|..- .|....++|.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 357899999999999999752 466778888764
No 67
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.36 E-value=0.064 Score=39.38 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=25.4
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.+.|+||+|+|.|.+||..- .|+...++|.+.
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 46789999999999999752 466777888664
No 68
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.13 E-value=0.11 Score=38.78 Aligned_cols=34 Identities=32% Similarity=0.478 Sum_probs=26.5
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
...+.|++|+|++.|.+||..- .+....++|.+.
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 4567899999999999999752 466777888653
No 69
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=94.12 E-value=0.079 Score=40.08 Aligned_cols=33 Identities=33% Similarity=0.389 Sum_probs=25.4
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|++|+|+|.|.+||..- .|....|+|.+.
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 357899999999999999762 456667776553
No 70
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=94.10 E-value=0.14 Score=37.42 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=23.7
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~ 78 (369)
..+.|+||+|+|.|.++|..- ....-.|+|.+.
T Consensus 56 ~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 56 NQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC-
T ss_pred CEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCC
Confidence 457899999999999999763 223446777653
No 71
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=94.07 E-value=0.18 Score=37.73 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.4
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|++|+|++.|.+||..
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEE
Confidence 346889999999999999985
No 72
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=94.04 E-value=0.16 Score=36.76 Aligned_cols=55 Identities=20% Similarity=0.288 Sum_probs=32.8
Q ss_pred CEEEEEeCCC--CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS--SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|.-... ..-.|+|............ ....-...++|+||+|+|.|.++|..
T Consensus 18 v~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V~A 74 (100)
T 3b83_A 18 AVVTWQPPILPIEGILVTFGRKNDPSDETTV----------DLTSSITSLTLTNLEPNTTYEIRIVA 74 (100)
T ss_dssp EEEEEECCSSCCSEEEEEEEESSCTTTCEEE----------EECTTEEEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEcCCcccCCEEEEEEEECCCCCCceEE----------EECCcceEEEECCCCCCCEEEEEEEE
Confidence 3677865542 3345667654321111100 01234456889999999999999986
No 73
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.88 E-value=0.079 Score=38.53 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=24.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.+.|++|+|++.|.+||..- .|....++|.+.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 62 RYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 46788999999999999752 456667777653
No 74
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.68 E-value=0.13 Score=38.98 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=41.3
Q ss_pred CEEEEEeCCC----CCCEEEEeccCCC---CCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC-------
Q 017588 1 MRLSWITENS----SPATVKYGTSPGV---YDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD------- 66 (369)
Q Consensus 1 m~v~W~t~~~----~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~------- 66 (369)
+.|.|..... ..-.|.|+..... ..... .+ ....-...++|+||+|+|.|.++|..-
T Consensus 32 i~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~-~~--------v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp 102 (120)
T 1ujt_A 32 VQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN-LD--------AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp EEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE-EE--------CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred EEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE-EE--------ecCCCcCEEEECCCCCCCEEEEEEEEECCCccCC
Confidence 4789996432 2346788876531 11110 00 012223568899999999999999742
Q ss_pred CCCeeEEECCC
Q 017588 67 SAQERSFKTPP 77 (369)
Q Consensus 67 ~s~~~~F~t~~ 77 (369)
.|....|+|+.
T Consensus 103 ~S~~v~~~T~e 113 (120)
T 1ujt_A 103 DSESKTVRTTE 113 (120)
T ss_dssp CCCCEEEEECS
T ss_pred CCCCEEEECCC
Confidence 46667788764
No 75
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.61 E-value=0.066 Score=39.54 Aligned_cols=31 Identities=29% Similarity=0.549 Sum_probs=26.1
Q ss_pred EEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 48 VVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 48 ~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
++|+||+|+|.|.++|... .|....|+|.+.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCC
Confidence 8999999999999999752 567778888775
No 76
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.55 E-value=0.09 Score=38.75 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=25.1
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|++|+|++.|.+||... .|....++|.+.
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~ 104 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPG 104 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCC
Confidence 346788999999999999752 456667777653
No 77
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=93.54 E-value=0.12 Score=38.12 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=24.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~ 78 (369)
..++|+||+|||.|.++|... .+....++|.|.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCC
Confidence 357899999999999998863 123445677654
No 78
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.48 E-value=0.09 Score=39.04 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=25.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|++|+|+|.|.++|..- .|....|+|.+.
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 357899999999999999752 355667887653
No 79
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.38 E-value=0.044 Score=39.79 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=23.2
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
.+.|+||+|+|.|.++|..- .|....|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 46789999999999999752 35555666654
No 80
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.06 E-value=0.081 Score=39.51 Aligned_cols=33 Identities=21% Similarity=0.055 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~ 78 (369)
..+.|+||+|+|.|.++|..- ......|+|.+.
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 467899999999999999763 223456777653
No 81
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.00 E-value=0.15 Score=37.10 Aligned_cols=32 Identities=22% Similarity=0.072 Sum_probs=24.7
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..+.|++|+|+|.|.++|..- .+....|+|..
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCC
Confidence 346789999999999999753 35666777754
No 82
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.94 E-value=0.14 Score=38.20 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=26.0
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|+||+|+|.|.++|..- .|....|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKA 113 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCC
Confidence 467899999999999999752 466677888654
No 83
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.86 E-value=0.045 Score=40.66 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=24.9
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.++|+||+|++.|.|||..- .|+...++|.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEG 104 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCC
Confidence 46788999999999999752 466677887654
No 84
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.61 E-value=0.087 Score=39.02 Aligned_cols=33 Identities=33% Similarity=0.506 Sum_probs=25.9
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|+||+|+|.|.+||..- .|....|+|.+.
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCC
Confidence 457889999999999999752 466677888654
No 85
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=92.47 E-value=0.23 Score=35.84 Aligned_cols=20 Identities=25% Similarity=0.167 Sum_probs=17.8
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
-.++|+||+|+|.|.++|..
T Consensus 55 t~~~l~gL~P~t~Y~~~V~A 74 (98)
T 3tes_A 55 RSYDLTGLKPGTEYTVSIYG 74 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEE
Confidence 35789999999999999986
No 86
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=92.44 E-value=0.19 Score=41.54 Aligned_cols=32 Identities=34% Similarity=0.400 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..++|++|+|+|.|.|+|..- .+....++|.+
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 68 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred ceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccC
Confidence 357889999999999999752 34556677754
No 87
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=92.38 E-value=0.27 Score=35.22 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=32.3
Q ss_pred CEEEEEeCCC--CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS--SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|..... ..-.|+|....+....... . ...-...++|+||+|+|.|.++|..
T Consensus 18 v~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V~A 74 (98)
T 3teu_A 18 ITVSWTPPSATITGYRITYTPSNGPGEPKEL------T----VPPSSTSVTITGLTPGVEYVVSVYA 74 (98)
T ss_dssp EEEEEECCSSCCSEEEEEEEETTSCSCCEEE------E----ECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEeCCCCcccEEEEEEEECCCCCceEEE------E----cCCCcCEEEecCCCCCCEEEEEEEE
Confidence 4678876642 3345677654321111100 0 1123345789999999999999976
No 88
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.36 E-value=0.097 Score=39.80 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=25.6
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
...+.|++|+|+|.|.++|..- .+....|+|.+.
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 84 ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp CCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 4567889999999999999763 345556777653
No 89
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.23 E-value=0.16 Score=37.13 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=17.7
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.+.|+||+|+|.|.++|..
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A 80 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQS 80 (104)
T ss_dssp EEEEESCCTTCCEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 7899999999999999986
No 90
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.18 E-value=0.065 Score=41.78 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=27.0
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|+||+|+|.|..||..- .|....|+|.+.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 457899999999999999752 467778999764
No 91
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=92.14 E-value=0.16 Score=38.16 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=18.0
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|++|+|++.|.|||..
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRA 95 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEE
Confidence 345788899999999999986
No 92
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.06 E-value=0.1 Score=38.92 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=33.0
Q ss_pred CEEEEEeCC-----C-CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC
Q 017588 1 MRLSWITEN-----S-SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD 66 (369)
Q Consensus 1 m~v~W~t~~-----~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~ 66 (369)
++|.|.... + ..-.|+|....+..+..+... ....-.++++||+|++.|.|||...
T Consensus 27 v~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 27 VTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp EEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred EEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEEE
Confidence 467887432 1 345677776543323222110 1112246789999999999999863
No 93
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.91 E-value=0.17 Score=38.01 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=25.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..+.|++|+|+|.|.++|..- .|....|+|+.
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 457889999999999999752 46677788764
No 94
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.83 E-value=0.42 Score=34.85 Aligned_cols=33 Identities=27% Similarity=0.191 Sum_probs=24.4
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPP 77 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~ 77 (369)
...+.|+||+|+|.|.++|..- ......|+|..
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCC
Confidence 3467899999999999999763 22345677754
No 95
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.83 E-value=0.095 Score=38.60 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=26.2
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.+.|+||+|++.|.+||..- .|....|+|.+.
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 67889999999999999752 466778888764
No 96
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=91.77 E-value=0.2 Score=36.16 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=34.9
Q ss_pred CEEEEEeCCC--CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS--SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|..... ..-.|+|....+.... . + . ..++-...+.|+||.|+|.|...|..
T Consensus 22 ~~lsW~~p~~~v~~Y~I~y~~~~g~~~~-~--~---~----~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 22 FVVSWVSASDTVSGFRVEYELSEEGDEP-Q--Y---L----DLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp EEEECCCSCTTEEEEEEEEEETTTCCCC-E--E---E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEECCCCCCccEEEEEEEeCCCCCcc-e--E---E----ECCCCccEEEECCCCCCCEEEEEEEE
Confidence 4688877653 5567778776432110 0 0 0 11233456789999999999998875
No 97
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.66 E-value=0.21 Score=36.68 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=17.6
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|++|+|++.|.|||..
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEE
Confidence 35778999999999999986
No 98
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=91.64 E-value=0.36 Score=35.06 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=22.2
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEEC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKT 75 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t 75 (369)
.+.|++|+|+|.|.++|..- .|....++|
T Consensus 66 ~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 66 WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 46899999999999999752 355555665
No 99
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=91.62 E-value=0.29 Score=39.51 Aligned_cols=32 Identities=16% Similarity=0.025 Sum_probs=22.4
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~ 77 (369)
..+.|+||+|++.|.++|... ......|+|.|
T Consensus 147 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~p 184 (186)
T 1qr4_A 147 TRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTAL 184 (186)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC--
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecC
Confidence 457899999999999999853 12344566765
No 100
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=91.58 E-value=0.14 Score=38.87 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=25.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.++++||+|+|.|.+||... .|+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 47899999999999999863 356677888654
No 101
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.55 E-value=0.32 Score=36.85 Aligned_cols=34 Identities=12% Similarity=-0.048 Sum_probs=26.0
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
...++|+||+|+|.|.++|..- .+....++|...
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 4567899999999999999752 456667887643
No 102
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=91.27 E-value=0.31 Score=45.83 Aligned_cols=74 Identities=7% Similarity=0.091 Sum_probs=49.1
Q ss_pred CCeEEEEEeeCCCCCCc------HHHHHHHHhc-CCCeEEeccccCCCCCC----------------hHHHHH-HHHh--
Q 017588 80 LPIKFAIVGDLGQTGWT------NSTLQHVAKS-NYDMLLLPGDLSYADLD----------------QPLWDS-FGRM-- 133 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~------~~~~~~i~~~-~~d~vl~~GD~~~~~~~----------------~~~~~~-~~~~-- 133 (369)
.++++++.+.......+ ..+++.++.. +||.+|++|.+++.... ...++. |...
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67999999988654432 3455555554 79999999999986531 112233 2233
Q ss_pred --hHhhhcCCcEEEccCCCCCC
Q 017588 134 --VEPLASQRPWMVTQGNHEIE 153 (369)
Q Consensus 134 --~~~l~~~~P~~~v~GNHD~~ 153 (369)
++.+...+.++++||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 33333457799999999995
No 103
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=91.21 E-value=0.29 Score=35.08 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=18.3
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|+||+|+|.|.++|..
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYA 77 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEE
Confidence 346889999999999999986
No 104
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=91.19 E-value=0.4 Score=36.19 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=18.0
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|+||+|+|.|.++|..
T Consensus 82 t~~~l~gL~P~t~Y~~~V~A 101 (121)
T 2ocf_D 82 STATISGLKPGVDYTITVYA 101 (121)
T ss_dssp CEEEECCCCTTCEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEE
Confidence 46889999999999999986
No 105
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.19 E-value=0.24 Score=36.64 Aligned_cols=66 Identities=21% Similarity=0.297 Sum_probs=37.7
Q ss_pred CEEEEEeCCC--CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC----CC--CeeE
Q 017588 1 MRLSWITENS--SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD----SA--QERS 72 (369)
Q Consensus 1 m~v~W~t~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~----~s--~~~~ 72 (369)
|.|.|.-... ..-.|+|....+....... ..+-...+.|+||+|+|.|..+|..- .+ ....
T Consensus 24 i~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~ 92 (108)
T 2ee3_A 24 ARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGR 92 (108)
T ss_dssp EEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCE
Confidence 4677865442 4446777765432111110 01122357899999999999999752 11 1235
Q ss_pred EECCC
Q 017588 73 FKTPP 77 (369)
Q Consensus 73 F~t~~ 77 (369)
|+|.+
T Consensus 93 ~~T~~ 97 (108)
T 2ee3_A 93 VTTKK 97 (108)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 88863
No 106
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.18 E-value=0.28 Score=36.54 Aligned_cols=34 Identities=18% Similarity=-0.002 Sum_probs=26.3
Q ss_pred eEEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
-...+.|++|+|+|.|.++|..- .|....|+|..
T Consensus 76 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 76 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 35678899999999999999752 45666777755
No 107
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=91.16 E-value=0.44 Score=35.49 Aligned_cols=55 Identities=20% Similarity=0.386 Sum_probs=33.5
Q ss_pred CEEEEEeCCC--CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS--SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|..... ..-.|+|....+..... + .. ..+-...++|+||+|+|.|.++|..
T Consensus 20 v~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 20 LLISWDSGRGSYQYYRITYGETGGNSPVQ---E---FT----VPGPVHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp EEEEEECCSCCCSEEEEEEEESSCSSCCE---E---EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEcCCcCcccEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 4688887542 34567777654321100 0 11 1122345889999999999999875
No 108
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=90.96 E-value=0.29 Score=43.19 Aligned_cols=32 Identities=31% Similarity=0.200 Sum_probs=25.5
Q ss_pred EEEEeCCCCCCCEEEEEeCCC----------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD----------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~----------~s~~~~F~t~~ 77 (369)
..+.|++|+|+|.|.+||... +|+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 457899999999999999752 46677888865
No 109
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=90.93 E-value=0.41 Score=34.64 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=18.0
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|+||+|+|.|.++|..
T Consensus 60 t~~~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 60 STATISGLSPGVDYTITVYA 79 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEE
Confidence 46889999999999999976
No 110
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.91 E-value=0.3 Score=36.43 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=18.0
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|+||.|+|.|..+|..
T Consensus 70 t~~~l~gL~PgT~Y~~~V~A 89 (112)
T 2cui_A 70 HSAVLRDLRSGTLYSLTLYG 89 (112)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEE
Confidence 37899999999999999876
No 111
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.79 E-value=0.1 Score=38.94 Aligned_cols=32 Identities=25% Similarity=0.175 Sum_probs=25.1
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..++|+||+|+|.|.++|..- +|....++|.+
T Consensus 68 ~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~ 106 (113)
T 1x5j_A 68 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106 (113)
T ss_dssp SEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred CEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccC
Confidence 457899999999999999752 46666777755
No 112
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=90.74 E-value=0.6 Score=38.49 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=24.5
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
.++|+||+|++.|.|+|..- .|....++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 56889999999999999752 46667777754
No 113
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.57 E-value=0.42 Score=34.59 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|++|+|++.|.++|..
T Consensus 62 ~~~~i~~L~p~t~Y~~~V~A 81 (107)
T 2dn7_A 62 QHFTVTGLHKGTTYIFRLAA 81 (107)
T ss_dssp CEEEEECCCTTCEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEE
Confidence 35778999999999999986
No 114
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=90.51 E-value=0.19 Score=36.96 Aligned_cols=20 Identities=15% Similarity=0.122 Sum_probs=17.4
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|++|+|++.|.|||..
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEE
Confidence 35678899999999999986
No 115
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=90.48 E-value=0.34 Score=35.49 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=14.8
Q ss_pred EeCCCCCCCEEEEEeCC
Q 017588 49 VVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 49 ~l~~L~p~t~Y~Y~v~~ 65 (369)
+.++|++|+.|+|+|..
T Consensus 60 ~d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSA 76 (103)
T ss_dssp EETTCCTTCCCEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 45799999999999975
No 116
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.46 E-value=0.32 Score=36.65 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=17.7
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|++|+|++.|.+||..
T Consensus 79 ~~~~v~~L~p~t~Y~frV~A 98 (124)
T 1wis_A 79 RSMEVPDLNPFTCYSFRMRQ 98 (124)
T ss_dssp SEEEECSCCTTSEECCCCEE
T ss_pred eEEEeCCCCCCCEEEEEEEE
Confidence 46789999999999999975
No 117
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=90.30 E-value=0.3 Score=40.45 Aligned_cols=32 Identities=31% Similarity=0.200 Sum_probs=24.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC----------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD----------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~----------~s~~~~F~t~~ 77 (369)
..++|++|+|+|.|.+||... +|....++|.+
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp SEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred ceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 467899999999999999752 34556677754
No 118
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.09 E-value=0.31 Score=34.53 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=41.7
Q ss_pred EEEEeCCC---CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC----C--CCeeEE
Q 017588 3 LSWITENS---SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD----S--AQERSF 73 (369)
Q Consensus 3 v~W~t~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~----~--s~~~~F 73 (369)
|.|..... .+-.++|+..... +.-.... -++.+...+|+||+||..|.=+|.+- + ...+.|
T Consensus 25 iqW~~~s~s~I~eyiL~~R~k~~~------g~Wke~~----Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~F 94 (98)
T 1oww_A 25 IQWNAPQPSHISKYILRWRPKNSV------GRWKEAT----IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDF 94 (98)
T ss_dssp EEEECCSSSCEEEEEEEEEETTCS------SCCEEEE----ECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEE
T ss_pred eEEecCCCCCceEEEEEEEEcCCC------CceeEEE----ecCccceEEEecCCCCcEEEEEEEEeeccCcccceEEEE
Confidence 78888884 5666778876432 1111111 24567778899999999999998763 2 126777
Q ss_pred EC
Q 017588 74 KT 75 (369)
Q Consensus 74 ~t 75 (369)
.|
T Consensus 95 tT 96 (98)
T 1oww_A 95 TT 96 (98)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 119
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.05 E-value=0.079 Score=36.30 Aligned_cols=64 Identities=17% Similarity=0.140 Sum_probs=40.4
Q ss_pred EEEEeCCC---CCCEEEEeccCCCC-CceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC------CCCeeE
Q 017588 3 LSWITENS---SPATVKYGTSPGVY-DNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD------SAQERS 72 (369)
Q Consensus 3 v~W~t~~~---~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~ 72 (369)
|.|..... +.-.++|.++.... +..+. .++..+.-+|.||+||.+|.=++.+- +...+.
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~-----------IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfd 70 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFD 70 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEE-----------ECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEE-----------cCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEE
Confidence 56775443 45566788776443 22221 34555666789999999999887642 345667
Q ss_pred EECCC
Q 017588 73 FKTPP 77 (369)
Q Consensus 73 F~t~~ 77 (369)
|+|..
T Consensus 71 fTT~~ 75 (89)
T 1q38_A 71 FTTTS 75 (89)
T ss_dssp ECSSS
T ss_pred EEecc
Confidence 77644
No 120
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.99 E-value=0.32 Score=35.99 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=37.8
Q ss_pred EEEEEeCCC-----CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC-------CCC
Q 017588 2 RLSWITENS-----SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD-------SAQ 69 (369)
Q Consensus 2 ~v~W~t~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~-------~s~ 69 (369)
++.|.-... ..-.|+|.. .+..+...... ...-...++|.+|.|++.|.+||.+- .|+
T Consensus 24 ~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---------~~~~~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~ 93 (108)
T 1v5j_A 24 LLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---------VAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSN 93 (108)
T ss_dssp EEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---------ECSSCCEEECCCCCTTSCEECCBEEEETTEEEEECS
T ss_pred EEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---------cCCCcCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCC
Confidence 577877653 233567776 22223322211 11223456799999999999999762 245
Q ss_pred eeEEECCC
Q 017588 70 ERSFKTPP 77 (369)
Q Consensus 70 ~~~F~t~~ 77 (369)
...++|..
T Consensus 94 ~~~v~T~~ 101 (108)
T 1v5j_A 94 TANVSTSG 101 (108)
T ss_dssp CCCCCCSS
T ss_pred CEEEEeCC
Confidence 55555544
No 121
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=89.63 E-value=0.34 Score=36.19 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=17.5
Q ss_pred EEEeCCCCCCCEEEEEeCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD 66 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~ 66 (369)
.++|++|+|++.|.|||...
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp CCEECCCCSSEEEEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEe
Confidence 45789999999999999874
No 122
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=89.36 E-value=0.71 Score=38.19 Aligned_cols=33 Identities=9% Similarity=-0.007 Sum_probs=25.4
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC----------CCCeeEEECCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD----------SAQERSFKTPP 77 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~----------~s~~~~F~t~~ 77 (369)
...+.|.+|+|+|.|.+||... +|....|+|+.
T Consensus 171 ~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 171 KDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp EEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 3567899999999999998741 46666777754
No 123
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.33 E-value=0.25 Score=37.58 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=23.8
Q ss_pred EEEeCCCCCCCEEEEEeCCC------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~ 77 (369)
.++|+||+|++.|.|||..- .+....++|++
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~ 117 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNS 117 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCC
Confidence 45788999999999999863 35566677765
No 124
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=89.19 E-value=0.34 Score=35.25 Aligned_cols=21 Identities=19% Similarity=0.235 Sum_probs=18.3
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|+||+|+|.|.++|..
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYA 83 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEE
Confidence 356889999999999999876
No 125
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=89.18 E-value=0.43 Score=39.26 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=18.0
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|+||+|+|.|.++|..
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYA 176 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEE
Confidence 46799999999999999986
No 126
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.14 E-value=0.31 Score=36.11 Aligned_cols=21 Identities=38% Similarity=0.553 Sum_probs=18.0
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|++|+|++.|.+||..
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEE
Confidence 345788999999999999986
No 127
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.94 E-value=0.96 Score=33.09 Aligned_cols=20 Identities=5% Similarity=0.066 Sum_probs=17.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD 66 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~ 66 (369)
.+.|.+|+||+.|..||...
T Consensus 68 ~~~l~~L~p~t~Y~~~VRa~ 87 (109)
T 1uc6_A 68 AHTITDAYAGKEYIIQVAAK 87 (109)
T ss_dssp EEEETTCCSSSCEEEEEECC
T ss_pred EEEEeCCCCCCEEEEEEEEE
Confidence 56889999999999999863
No 128
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.87 E-value=0.4 Score=35.55 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=24.7
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.++|++|+|++.|.|||..- .+..-.++|.+.
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 46889999999999999852 456667777653
No 129
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=88.84 E-value=0.63 Score=38.38 Aligned_cols=33 Identities=33% Similarity=0.389 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
....|.+|+|++.|.|+|... .|....|+|+|.
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 457789999999999999753 466778999875
No 130
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=88.83 E-value=1.2 Score=36.65 Aligned_cols=31 Identities=13% Similarity=0.219 Sum_probs=25.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC--------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD--------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~--------~s~~~~F~t~~ 77 (369)
.+.|.+|+|++.|..||... +|+...|+|+.
T Consensus 166 ~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 166 EFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp EEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred EEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 57899999999999999742 57788899965
No 131
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=88.71 E-value=0.85 Score=37.52 Aligned_cols=32 Identities=25% Similarity=0.175 Sum_probs=25.0
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..+.|++|+|+|.|.++|..- .+....++|..
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 357799999999999999752 35567788854
No 132
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=88.63 E-value=0.43 Score=33.34 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=16.8
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+++|+|++.|.|+|..
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKA 70 (88)
T ss_dssp EEEECCCCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 4578999999999999986
No 133
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=88.29 E-value=0.93 Score=37.96 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=26.8
Q ss_pred EEEEEeCCCCCCCEEEEEeCC-----------CCCCeeEEECCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP-----------DSAQERSFKTPPA 78 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~-----------~~s~~~~F~t~~~ 78 (369)
...+.|.+|.|||.|..||.. ++|....|+|.+.
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 346778999999999999973 2577788999774
No 134
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=88.06 E-value=1.3 Score=37.23 Aligned_cols=31 Identities=19% Similarity=0.104 Sum_probs=24.0
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
.+.|++|+|+|.|.++|..- .+....++|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 59 SVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 57789999999999999752 35566777754
No 135
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=88.05 E-value=0.6 Score=37.59 Aligned_cols=38 Identities=16% Similarity=0.102 Sum_probs=25.5
Q ss_pred EEEeCCCCCCCEEEEEeCCC----C--CCeeEEECCCC-CCCeEE
Q 017588 47 DVVVGPLKPNTVYYYRCGPD----S--AQERSFKTPPA-QLPIKF 84 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~----~--s~~~~F~t~~~-~~~~~f 84 (369)
.+.|++|+|++.|.++|... . .....++|.|. ...+++
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P~~l~~ 103 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSPKGISF 103 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCCSCEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCCCccEE
Confidence 46789999999999999863 1 22445666654 344444
No 136
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=87.91 E-value=1.3 Score=36.38 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|++|+|++.|.++|..
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a 96 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYT 96 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEE
Confidence 35788999999999999975
No 137
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=87.89 E-value=0.59 Score=34.67 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.1
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|++|+|++.|.|||..
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1wf5_A 75 ATSVTVKGLVPARSYQFRLCA 95 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEE
T ss_pred ccEEEECCcCCCCEEEEEEEE
Confidence 345788999999999999986
No 138
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=87.89 E-value=2.4 Score=36.45 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=18.9
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|++|+|++.|.++|..
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A 179 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISA 179 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEE
T ss_pred cceEEEecCCCCCEEEEEEEE
Confidence 567889999999999999986
No 139
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.53 E-value=0.42 Score=35.47 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=25.9
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|++|+|+|.|.+||..- .+....|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 357899999999999999752 466778888653
No 140
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=87.16 E-value=1.1 Score=39.63 Aligned_cols=67 Identities=13% Similarity=0.056 Sum_probs=40.7
Q ss_pred CEEEEEeCCC-----CCCEEEEe-ccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC--------
Q 017588 1 MRLSWITENS-----SPATVKYG-TSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD-------- 66 (369)
Q Consensus 1 m~v~W~t~~~-----~~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~-------- 66 (369)
|.|.|..... -.-.|+|. ...+..+..+.. .......+.|.+|.|+|.|..||...
T Consensus 225 l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 225 LQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP----------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp EEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE----------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred EEEEECCCCCCCceeEEEEEEEccCCCCCCcEEccc----------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 4678877542 13456676 443322322211 12234678899999999999999741
Q ss_pred --CCCeeEEECCC
Q 017588 67 --SAQERSFKTPP 77 (369)
Q Consensus 67 --~s~~~~F~t~~ 77 (369)
+|....++|+.
T Consensus 295 S~wS~~~~~~T~~ 307 (313)
T 2d9q_B 295 SDWSPSLELRTTE 307 (313)
T ss_dssp CCCCCCEEECCCC
T ss_pred CCCCCccceeCCc
Confidence 45666777754
No 141
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=86.71 E-value=1.2 Score=35.89 Aligned_cols=19 Identities=16% Similarity=0.347 Sum_probs=17.1
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.+.|++|+|++.|.++|..
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp EEEECCCCTTCEEEEEEEE
T ss_pred EEEeCCcCCCCEEEEEEEE
Confidence 4688999999999999986
No 142
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=86.65 E-value=1.7 Score=37.69 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC-CCCeEEEEEe
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA-QLPIKFAIVG 88 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~-~~~~~f~~~g 88 (369)
..+.|+||+|++.|.++|..- ......+.|.|. ...+++..++
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~~ 214 (290)
T 3r8q_A 165 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFLATT 214 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEEEeeC
Confidence 357899999999999999753 122334556553 3344444333
No 143
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=86.60 E-value=0.3 Score=36.45 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=23.3
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
.++|++|+|++.|.|||..- .+....++|.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCC
Confidence 46889999999999999862 34555566654
No 144
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=86.56 E-value=1.2 Score=36.61 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=23.9
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..+.|++|+|++.|.++|..- .|+...|+|..
T Consensus 166 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 166 LTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred eEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 457899999999999999752 45566666644
No 145
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=86.27 E-value=0.54 Score=35.11 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=25.6
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..+.|+||+|+|.|.++|..- .|....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 467899999999999999752 356667887653
No 146
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=85.83 E-value=2.2 Score=36.74 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=28.5
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC-CCCeEEEEEe
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA-QLPIKFAIVG 88 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~-~~~~~f~~~g 88 (369)
...+.|++|+|++.|.++|... ......|.|+|. ...+++..++
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~ 117 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRT 117 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEC
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEecC
Confidence 3457889999999999999863 223445777654 3334444333
No 147
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=85.76 E-value=1.1 Score=31.61 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=19.0
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD 66 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~ 66 (369)
...++|+||+|+|.|.++|..-
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~ 75 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVAL 75 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEEC
T ss_pred ccEEEeCCCCCCCEEEEEEEEE
Confidence 4578899999999999999863
No 148
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=85.58 E-value=2.3 Score=35.65 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=23.0
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------------CCCeeEEECC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------------SAQERSFKTP 76 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------------~s~~~~F~t~ 76 (369)
..+.|.+|+||+.|..||... +|....|+|+
T Consensus 180 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 180 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred eEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 357889999999999998741 4555667763
No 149
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=85.54 E-value=1.3 Score=36.29 Aligned_cols=21 Identities=29% Similarity=0.325 Sum_probs=18.3
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|+||+|+|.|.++|..
T Consensus 167 ~~~~~i~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 167 DNAVVLTNLLPGTEYVVSVSS 187 (203)
T ss_dssp CCEEEECSCCTTCEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEE
Confidence 446789999999999999986
No 150
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.51 E-value=0.66 Score=34.80 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=26.6
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
..++|++|+|++.|.+||..- .|....|+|++.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 356789999999999999752 567788888765
No 151
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=85.47 E-value=1.3 Score=36.04 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=32.6
Q ss_pred CEEEEEeCCC---CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS---SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|..... ..-.|+|....+...... .. ...-...+.|+||+|++.|.++|..
T Consensus 18 i~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~------~~----~~~~~~~~~i~~L~p~t~Y~~~V~a 75 (201)
T 2ha1_A 18 HPIQWNAPQPSHISKYILRWRPKNSVGRWKE------AT----IPGHLNSYTIKGLKPGVVYEGQLIS 75 (201)
T ss_dssp EEEEEECCSSTTCCEEEEEEEETTCSSCCEE------EE----ECTTCCEEEECSCCTTEEEEEEEEE
T ss_pred EEEEEeCCCCCCceEEEEEEEECCCCCceEE------Ee----cCCCccEEEecCCCCCCEEEEEEEE
Confidence 4688887642 344566775432111110 00 1112236789999999999999986
No 152
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=85.36 E-value=0.55 Score=35.48 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=27.0
Q ss_pred eEEEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
-...++|++|+|+|.|.++|..- .|....|+|.+
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 34567899999999999999863 46667888865
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=84.39 E-value=1.4 Score=42.46 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=25.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.++|+||+|+|.|.++|..- .|+...|+|.+.
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 57899999999999999752 467778888764
No 154
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=83.87 E-value=0.68 Score=34.28 Aligned_cols=21 Identities=19% Similarity=0.131 Sum_probs=18.2
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|++|+|++.|.++|..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEE
T ss_pred ceEEEEcCCCCCCEEEEEEEE
Confidence 446788999999999999986
No 155
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=83.74 E-value=3.2 Score=35.89 Aligned_cols=21 Identities=29% Similarity=0.143 Sum_probs=18.2
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|++|+|++.|.++|..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a 93 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYA 93 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEE
Confidence 346789999999999999985
No 156
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=83.24 E-value=2 Score=34.38 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=17.0
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.+.|++|+|++.|.|+|..
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp EEEECCCCTTCEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEE
Confidence 4678999999999999975
No 157
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=83.20 E-value=1.3 Score=40.07 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=24.5
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~ 78 (369)
..+.|++|+|++.|.+||..- ......|+|++.
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEECCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEecCCCC
Confidence 457899999999999999853 122347888764
No 158
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=83.15 E-value=1.6 Score=32.71 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=20.7
Q ss_pred eCCCCCCCEEEEEeCCC-------CCCe-eEEECCC
Q 017588 50 VGPLKPNTVYYYRCGPD-------SAQE-RSFKTPP 77 (369)
Q Consensus 50 l~~L~p~t~Y~Y~v~~~-------~s~~-~~F~t~~ 77 (369)
+.+|+|++.|.|||..- .+.. ..|+|.+
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCC
Confidence 56999999999999852 2344 4677755
No 159
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=82.65 E-value=2.4 Score=34.56 Aligned_cols=21 Identities=10% Similarity=0.173 Sum_probs=18.1
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|++|+|++.|.++|..
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A 183 (205)
T 1cfb_A 163 QNNIVIADQPTFVKYLIKVVA 183 (205)
T ss_dssp CCEEEECSCCSSCEEEEEEEE
T ss_pred ccEEEEcCCCCCcEEEEEEEE
Confidence 346789999999999999975
No 160
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=82.61 E-value=3.7 Score=34.59 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=25.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC-----------CCCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP-----------DSAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~-----------~~s~~~~F~t~~~ 78 (369)
..+.+.+|.|+|.|..||.. +||....|+|++.
T Consensus 172 ~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 172 LTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp EEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred eEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 34667899999999999963 1567788988763
No 161
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=81.63 E-value=1 Score=39.01 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=25.6
Q ss_pred EEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~ 77 (369)
..++|+||+|++.|.++|..- .+....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 357899999999999999752 46677888864
No 162
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=81.58 E-value=2.1 Score=34.95 Aligned_cols=20 Identities=20% Similarity=0.137 Sum_probs=17.6
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|++|+|++.|.++|..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEE
Confidence 35689999999999999986
No 163
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=81.26 E-value=0.94 Score=33.28 Aligned_cols=19 Identities=32% Similarity=0.525 Sum_probs=17.2
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.+.|++|+|++.|.|||..
T Consensus 73 ~~~i~~L~p~t~Y~frV~A 91 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp EEEECSCCTTCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 5689999999999999986
No 164
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=81.05 E-value=1.6 Score=35.58 Aligned_cols=21 Identities=19% Similarity=0.184 Sum_probs=18.3
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.|+||+|++.|.++|..
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEE
Confidence 346789999999999999986
No 165
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=80.58 E-value=2.5 Score=34.59 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=18.8
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
-...+.|++|+|+|.|.|||..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEE
Confidence 3456789999999999999875
No 166
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=80.22 E-value=2.8 Score=34.98 Aligned_cols=18 Identities=17% Similarity=0.407 Sum_probs=16.2
Q ss_pred EEeCCCCCCCEEEEEeCC
Q 017588 48 VVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 48 ~~l~~L~p~t~Y~Y~v~~ 65 (369)
.+++||+|+|.|-|+|..
T Consensus 202 yt~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp EEECSCCTTCEEEEEEEE
T ss_pred EEecCCCCCCEEEEEEEE
Confidence 568899999999999985
No 167
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=79.86 E-value=2.2 Score=34.68 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=20.2
Q ss_pred EEeCCCCCCCEEEEEeCCC-------CC-CeeEEECCC
Q 017588 48 VVVGPLKPNTVYYYRCGPD-------SA-QERSFKTPP 77 (369)
Q Consensus 48 ~~l~~L~p~t~Y~Y~v~~~-------~s-~~~~F~t~~ 77 (369)
..+ +|+|+|.|.|||..- .+ ....++|.+
T Consensus 65 ~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~ 101 (205)
T 1cfb_A 65 FVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQP 101 (205)
T ss_dssp EEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECC
T ss_pred EEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCC
Confidence 345 899999999999752 23 345666654
No 168
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=79.14 E-value=4.8 Score=35.97 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.4
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|+||+|++.|.++|..
T Consensus 239 ~~~~i~~L~p~t~Y~~~V~A 258 (368)
T 1fnf_A 239 NSITLTNLTPGTEYVVSIVA 258 (368)
T ss_dssp CEEEEESCCTTCEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEE
Confidence 35678899999999999986
No 169
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=78.17 E-value=1.2 Score=37.92 Aligned_cols=31 Identities=23% Similarity=0.179 Sum_probs=23.5
Q ss_pred EEEEeCCCCCCCEEEEEeCCC---------CCCeeEEECC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD---------SAQERSFKTP 76 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~---------~s~~~~F~t~ 76 (369)
..+.|.+|+||+.|..||... +|....|+|+
T Consensus 195 ~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 195 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 457788999999999999852 4556666664
No 170
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=77.49 E-value=4.7 Score=36.18 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.7
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|+||+|++.|.++|..
T Consensus 331 ~~~~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 331 NSITLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEE
Confidence 35789999999999999986
No 171
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=77.34 E-value=3.7 Score=36.94 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=33.4
Q ss_pred CEEEEEeCCC---CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS---SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|.-... ..-.|+|....+......... ...-...+.|++|+|++.|.++|..
T Consensus 20 v~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 20 LTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp EEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCEEEEEEE
T ss_pred EEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEEEEEEEE
Confidence 4688887652 344677766543221111100 1122345788999999999999976
No 172
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=75.92 E-value=4.4 Score=33.77 Aligned_cols=36 Identities=8% Similarity=0.145 Sum_probs=27.6
Q ss_pred ceEEEEEeCCCCCCCEEEEEeCC-------------CCCCeeEEECCCC
Q 017588 43 GEIHDVVVGPLKPNTVYYYRCGP-------------DSAQERSFKTPPA 78 (369)
Q Consensus 43 ~~~~~~~l~~L~p~t~Y~Y~v~~-------------~~s~~~~F~t~~~ 78 (369)
.....+.+.+|.|++.|..||.. ++|+...|.|++.
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 34566778899999999999953 1477888999775
No 173
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=75.76 E-value=3.2 Score=37.16 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=32.8
Q ss_pred CEEEEEeCCC---CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS---SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
++|.|..... ..-.|+|....+......... .......+.|++|+|++.|.|+|..
T Consensus 19 v~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (368)
T 1fnf_A 19 LTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNVSVYT 77 (368)
T ss_dssp EEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEEEEEEE
T ss_pred EEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEEEEEEE
Confidence 4677877542 344666665443211111100 1122346789999999999999985
No 174
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=74.75 E-value=1.9 Score=40.59 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|+||+|||.|-.+|..
T Consensus 424 ~~~~i~~L~p~t~Y~~~v~a 443 (461)
T 3csg_A 424 STATISGLSPGVDYTITVYA 443 (461)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred ceEEecCCCCCCEEEEEEEE
Confidence 56899999999999999986
No 175
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=73.51 E-value=1.7 Score=41.35 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=26.1
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC---------CCCCeeEEECCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP---------DSAQERSFKTPP 77 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~---------~~s~~~~F~t~~ 77 (369)
..+.+.|.+|+|+|.|..||.. ++|+...|+|++
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 4566799999999999999863 256666777765
No 176
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=72.97 E-value=4.4 Score=34.89 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=17.9
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...+.+++|+|++.|.++|..
T Consensus 156 ~~~~~~~~L~p~t~Y~~~V~A 176 (290)
T 3l5i_A 156 HRTYLRGNLAESKCYLITVTP 176 (290)
T ss_dssp SEEECCSCCCTTCEEEEEEEE
T ss_pred cceEEecCcCCccEEEEEEEE
Confidence 445678999999999999985
No 177
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=72.35 E-value=2.3 Score=40.39 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=40.3
Q ss_pred CEEEEEeCCC-----CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCCC---------
Q 017588 1 MRLSWITENS-----SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGPD--------- 66 (369)
Q Consensus 1 m~v~W~t~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~--------- 66 (369)
+.|.|..... -.-.|+|........... .... ....-.+.+.|.+|+|+|.|..||...
T Consensus 398 l~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~------vsv~-~~~~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSe 470 (483)
T 3e0g_A 398 VKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRN------VTIQ-GVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSK 470 (483)
T ss_dssp CCEEEECCSCCTTSBCCCEEEEECSSSCCCEEE------CCCB-CCSSSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCC
T ss_pred EEEEECCCCCCCCceEEEEEEEEECCCCCceEE------EEEe-ccCCceeEEEEeccCCCcEEEEEEEEeeCCCCCcCC
Confidence 3577876642 245677776543211110 0000 011223457799999999999999752
Q ss_pred CCCeeEEECCC
Q 017588 67 SAQERSFKTPP 77 (369)
Q Consensus 67 ~s~~~~F~t~~ 77 (369)
+|+...|+|+.
T Consensus 471 WS~~~~f~T~E 481 (483)
T 3e0g_A 471 WSNKKQHLTTE 481 (483)
T ss_dssp CCCCCCCCCCC
T ss_pred CCCceeeECCC
Confidence 45666777754
No 178
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=72.18 E-value=4.7 Score=35.68 Aligned_cols=20 Identities=10% Similarity=-0.022 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|.+|.|++.|.+||..
T Consensus 256 ~~~~l~~L~p~t~Y~~rVrA 275 (325)
T 1n26_A 256 HHCVIHDAWSGLRHVVQLRA 275 (325)
T ss_dssp SEEEESSCCTTCCEEEEEEE
T ss_pred eEEEEeCCCCCCeEEEEEEE
Confidence 45789999999999999975
No 179
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.04 E-value=2 Score=31.74 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=17.8
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..++|++|+|+|.|.++|..
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKA 90 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEE
Confidence 45789999999999999986
No 180
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.78 E-value=1.1 Score=32.56 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEeCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD 66 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~ 66 (369)
..++|+||+|+|.|.++|..-
T Consensus 61 ~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 61 SHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp SEEEECSCCSSCCCBCBBCBB
T ss_pred CEEEeCCCCCCCEEEEEEEEE
Confidence 467899999999999999863
No 181
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=70.19 E-value=6.9 Score=32.16 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=20.1
Q ss_pred ceEEEEEeCCCCCCCEEEEEeCCC----------CCCeeEEECCCC
Q 017588 43 GEIHDVVVGPLKPNTVYYYRCGPD----------SAQERSFKTPPA 78 (369)
Q Consensus 43 ~~~~~~~l~~L~p~t~Y~Y~v~~~----------~s~~~~F~t~~~ 78 (369)
.....+.+.+|.||+.|..||... +|....|+|.+.
T Consensus 156 ~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 156 EPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 445556777999999999999842 577788888653
No 182
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=70.16 E-value=3.5 Score=34.69 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=22.2
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..++++|+|+|.|.|||..- .+....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 46778999999999999863 35556666644
No 183
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=68.98 E-value=5.5 Score=38.69 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=35.5
Q ss_pred CEEEEEeCCC------CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 1 MRLSWITENS------SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 1 m~v~W~t~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
+++.|..... ..-.|++...++..|..+. .. .. . ..+++||.||+.|.|||..
T Consensus 26 v~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~--------~~-t--~~~V~~L~~g~~Y~FRV~A 84 (573)
T 3uto_A 26 VILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS--------RY-T--YTTIEGLRAGKQYEFRIIA 84 (573)
T ss_dssp EEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE--------SS-S--EEEECCCCTTCEEEEEEEE
T ss_pred EEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc--------cC-C--EEEeCCCCCCCcEeEEEEE
Confidence 4789987642 2345677777666665553 21 11 1 3578999999999999985
No 184
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=67.32 E-value=1.9 Score=41.66 Aligned_cols=33 Identities=30% Similarity=0.169 Sum_probs=24.3
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC----------CCCeeEEECCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD----------SAQERSFKTPP 77 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~----------~s~~~~F~t~~ 77 (369)
...+.|++|+|+|.|.+||... +|....++|.+
T Consensus 258 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~ 300 (589)
T 3l5h_A 258 RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 300 (589)
T ss_dssp CSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCC
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCc
Confidence 3467899999999999999752 24555666654
No 185
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=66.53 E-value=2.3 Score=31.94 Aligned_cols=22 Identities=14% Similarity=0.205 Sum_probs=18.6
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
-...++|++|+|+|.|.++|..
T Consensus 79 ~~~~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 79 KQRYYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp TCCEEEECSCCSSCEECCEEEE
T ss_pred CeeEEEEeCCCCCCEEEEEEEE
Confidence 3456789999999999999975
No 186
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=66.25 E-value=5.5 Score=32.70 Aligned_cols=20 Identities=15% Similarity=0.034 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|.+|+|+|.|..||..
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEE
T ss_pred eeEEeecCCCCCEEEEEEEE
Confidence 35789999999999999975
No 187
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=65.14 E-value=24 Score=32.31 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=28.8
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC-------------CCCeeEEECCCC--CCCeEEEEEee
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD-------------SAQERSFKTPPA--QLPIKFAIVGD 89 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~-------------~s~~~~F~t~~~--~~~~~f~~~gD 89 (369)
...+.+.+|.|++.|..||... +|+...|+|++. ..+..+-.+.+
T Consensus 170 ~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~ 229 (419)
T 2gys_A 170 QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFD 229 (419)
T ss_dssp EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEEC
T ss_pred EEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEEC
Confidence 3344445999999999998731 356677888765 33444444433
No 188
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=64.52 E-value=3.4 Score=34.48 Aligned_cols=20 Identities=15% Similarity=0.346 Sum_probs=17.8
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|+||+|++.|.++|..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A 179 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKA 179 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEE
Confidence 46789999999999999975
No 189
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=64.33 E-value=17 Score=35.89 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=26.1
Q ss_pred eEEEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPPA 78 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~~ 78 (369)
-...++|+||+|+|.|.++|..- ......|+|++.
T Consensus 592 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~~~~~~~T~~~ 632 (680)
T 1zlg_A 592 DHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTPEL 632 (680)
T ss_pred cccEEEecCCCCCceEEEEEEEEcCCCcCCCcceEEECCCC
Confidence 35678999999999999999752 224567887643
No 190
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=62.53 E-value=20 Score=31.88 Aligned_cols=32 Identities=34% Similarity=0.457 Sum_probs=24.3
Q ss_pred EEEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~ 77 (369)
..+.|.+|+|++.|.|+|... .+....|+|.+
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecC
Confidence 457899999999999999752 34556777754
No 191
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=61.98 E-value=17 Score=35.92 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=19.1
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
-...++|+||+|+|.|.++|..
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQA 353 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEE
Confidence 3467889999999999999975
No 192
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=61.60 E-value=15 Score=31.09 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=30.7
Q ss_pred EEEEEeCCCC---CCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 2 RLSWITENSS---PATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 2 ~v~W~t~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.|.|....+. .-.|+|....+..+..... .......|.+|.|++.|..||..
T Consensus 154 ~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~------------~~~~~~~l~~L~p~~~Y~vqVR~ 208 (247)
T 2erj_C 154 ELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTFRVRS 208 (247)
T ss_dssp EEEEECSSCCTTEEEEEEEECSSCSSCEEEEE------------CSSCEEEESCCCTTSCEEEEEEE
T ss_pred EEEECCCCCCCcEEEEEEEeeCCCCCCEEEec------------CCceEEEecCCCCCCEEEEEEEE
Confidence 4677776532 2246776654333332211 01235667899999999999974
No 193
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=60.06 E-value=8.1 Score=31.54 Aligned_cols=32 Identities=19% Similarity=0.055 Sum_probs=24.5
Q ss_pred EEEeCCCCCCCEEEEEeCCC---------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD---------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~---------~s~~~~F~t~~~ 78 (369)
.++|.+|+|+|.|..+|..- .|+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 47899999999999998742 456667777553
No 194
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=58.74 E-value=14 Score=32.26 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=18.9
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
....+.|.+|+|+|.|.+||..
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra 286 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRV 286 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEE
T ss_pred CceEEEEccCCCCCEEEEEEEe
Confidence 4567889999999999999875
No 195
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=58.26 E-value=9.3 Score=31.42 Aligned_cols=19 Identities=16% Similarity=0.405 Sum_probs=16.9
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.++|.+|+|+|.|..+|..
T Consensus 161 ~~~i~~L~p~t~Ycv~Vra 179 (206)
T 4doh_B 161 PVHLETMEPGAAYCVKAQT 179 (206)
T ss_dssp EEEEEECCSSSCEEEEEEE
T ss_pred EEEEeCCCCCCcEEEEEEE
Confidence 5789999999999999875
No 196
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=58.03 E-value=19 Score=31.47 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=22.8
Q ss_pred EEEeCCCCCCCEEEEEeCCC---------CCCeeEEECC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD---------SAQERSFKTP 76 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~---------~s~~~~F~t~ 76 (369)
.++|.+|+|+|.|..+|..- .|+...++|.
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~ 198 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT 198 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECC
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEec
Confidence 57899999999999998641 3555666664
No 197
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=57.88 E-value=12 Score=30.30 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=31.7
Q ss_pred EEEEEeCCC---CCCEEEEeccCCCCCceEeeeeEEEeeeecccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 2 RLSWITENS---SPATVKYGTSPGVYDNSANGTTSSYHYVLYKSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 2 ~v~W~t~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.|.|....+ -.-.|+|....+..+..... .....+.|.+|.|++.|..||..
T Consensus 116 ~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y~vqVR~ 170 (199)
T 2b5i_C 116 ELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTFRVRS 170 (199)
T ss_dssp EEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCEEEEEEE
T ss_pred EEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEEEEEEEE
Confidence 567777653 23347777654433322210 01235677899999999999974
No 198
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=56.33 E-value=51 Score=27.74 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=43.7
Q ss_pred CeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCC
Q 017588 81 PIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEI 152 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 152 (369)
.++.+..+|.-.. .....++.+.....|+|+..|.. +-..+.-....+.++. ..+|++.-+||.|.
T Consensus 11 ~w~h~~~~DPdk~-~~~~~l~~~~~~GtDaI~vGgs~---gvt~~~~~~~v~~ik~--~~~Piil~p~~~~~ 76 (235)
T 3w01_A 11 KWRHIFKLDPAKH-ISDDDLDAICMSQTDAIMIGGTD---DVTEDNVIHLMSKIRR--YPLPLVLEISNIES 76 (235)
T ss_dssp TCCEEEEECTTSC-CCHHHHHHHHTSSCSEEEECCSS---CCCHHHHHHHHHHHTT--SCSCEEEECCCSTT
T ss_pred cceEEEeECCCCc-CCHHHHHHHHHcCCCEEEECCcC---CcCHHHHHHHHHHhcC--cCCCEEEecCCHHH
Confidence 4677888898432 24556777778899999999943 2223333333344444 36899999999866
No 199
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=53.76 E-value=12 Score=31.14 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=25.3
Q ss_pred EEEEeCCCCCCCEEEEEeCCC---------CCCeeEEECCCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGPD---------SAQERSFKTPPA 78 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~~---------~s~~~~F~t~~~ 78 (369)
+.+.|.+|+|+|.|..+|..- .|....|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 367899999999999998642 356677787664
No 200
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=52.16 E-value=22 Score=32.55 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=17.0
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017588 47 DVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.++|++|.|+|.|..+|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A 182 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKA 182 (414)
T ss_dssp EEEECCCCTTCEEEEEEEE
T ss_pred EEEEcCCCCCCeEEEEEEE
Confidence 4789999999999999874
No 201
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=49.79 E-value=12 Score=37.14 Aligned_cols=33 Identities=18% Similarity=0.014 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCCCEEEEEeCCC------CCCeeEEECCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGPD------SAQERSFKTPP 77 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~~------~s~~~~F~t~~ 77 (369)
...+.|++|+|+|.|.++|..- .+....++|..
T Consensus 421 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 421 HPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp SCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred cceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 4467899999999999999752 25556677754
No 202
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=48.93 E-value=13 Score=35.64 Aligned_cols=21 Identities=24% Similarity=0.411 Sum_probs=18.2
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
...++|++|+|+|.|.++|..
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A 419 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEA 419 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEE
T ss_pred cceeEeCCCCCCCEEEEEEEE
Confidence 456789999999999999975
No 203
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=48.64 E-value=14 Score=35.38 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=17.6
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.....+++|+|++.|.++|..
T Consensus 455 ~~~~~~~~L~p~t~Y~~~V~A 475 (589)
T 3l5h_A 455 HRTYLRGNLAESKCYLITVTP 475 (589)
T ss_dssp CEEECCSCCCSSSEEEEEECB
T ss_pred ceEEehhccccCcEEEEEEEE
Confidence 345567999999999999986
No 204
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=45.70 E-value=13 Score=27.29 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=22.6
Q ss_pred EEEeCCCCCCCEEEEEeCCC-------CCCeeEEECCCC
Q 017588 47 DVVVGPLKPNTVYYYRCGPD-------SAQERSFKTPPA 78 (369)
Q Consensus 47 ~~~l~~L~p~t~Y~Y~v~~~-------~s~~~~F~t~~~ 78 (369)
.+.+. |+|+|.|.++|..- .|+...|+|...
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 45666 99999999999752 355667777553
No 205
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=45.45 E-value=54 Score=27.47 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=42.6
Q ss_pred CeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhhcCCcEEEccCCCCC
Q 017588 81 PIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLASQRPWMVTQGNHEI 152 (369)
Q Consensus 81 ~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 152 (369)
.++.+..+|.-... ....++.+.....|+|+..|=. +-..+.-....+.+++ ..+|++.-+||++.
T Consensus 6 ~w~h~~~iDPdk~~-~~~~~~~~~~~GtD~i~vGGs~---gvt~~~~~~~v~~ik~--~~~Pvvlfp~~~~~ 71 (228)
T 3vzx_A 6 EWKHVFKLDPNKDL-PDEQLEILCESGTDAVIIGGSD---GVTEDNVLRMMSKVRR--FLVPCVLEVSAIEA 71 (228)
T ss_dssp GCCEEEEECTTSCC-CTTHHHHHHTSSCSEEEECCCS---CCCHHHHHHHHHHHTT--SSSCEEEECSCGGG
T ss_pred ceeEEEeECCCCCC-CHHHHHHHHHcCCCEEEECCcC---CCCHHHHHHHHHHhhc--cCCCEEEeCCCHHH
Confidence 46777888885432 2356777778889999999922 1223333333333443 36999999999865
No 206
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=42.05 E-value=43 Score=27.67 Aligned_cols=16 Identities=6% Similarity=0.046 Sum_probs=14.1
Q ss_pred eCCCCCCCEEEEEeCC
Q 017588 50 VGPLKPNTVYYYRCGP 65 (369)
Q Consensus 50 l~~L~p~t~Y~Y~v~~ 65 (369)
+.+|.+++.|.|||..
T Consensus 167 ~~~L~~~t~Y~frV~A 182 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAA 182 (232)
T ss_dssp CBEESSSEEEEEEEEE
T ss_pred eecCccCCceEEEEEE
Confidence 5689999999999986
No 207
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=40.82 E-value=39 Score=29.03 Aligned_cols=42 Identities=5% Similarity=0.033 Sum_probs=23.0
Q ss_pred EEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccc
Q 017588 229 VVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVH 274 (369)
Q Consensus 229 iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 274 (369)
++++|||++-......... .........+.++++ .+++-|+-
T Consensus 62 lIitHHP~~f~~~~~~~~~---~~~~~~i~~li~~~I-~lya~Ht~ 103 (267)
T 2fyw_A 62 LIIVKHAPIFRPIKDLLAS---RPQNQIYIDLIKHDI-AVYVSHTN 103 (267)
T ss_dssp EEEESSCSCCSCCCCCCTT---SHHHHHHHHHHHTTC-EEEECSHH
T ss_pred EEEECCccccCCccccccC---chHHHHHHHHHHCCC-eEEEeecc
Confidence 7888999754322211111 123444555566777 46777764
No 208
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=40.79 E-value=28 Score=33.96 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=25.1
Q ss_pred EEEEEeCCCCCCCEEEEEeCC----C----CCCeeEEECCCCC
Q 017588 45 IHDVVVGPLKPNTVYYYRCGP----D----SAQERSFKTPPAQ 79 (369)
Q Consensus 45 ~~~~~l~~L~p~t~Y~Y~v~~----~----~s~~~~F~t~~~~ 79 (369)
.+...+++|+|+|+|.|+|.. . .++.-..+|++..
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~~ 154 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKP 154 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccCC
Confidence 367889999999999999965 1 2445556665543
No 209
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=39.91 E-value=48 Score=28.09 Aligned_cols=20 Identities=25% Similarity=0.159 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
....|.+|+|++.|.|+|..
T Consensus 254 ~~~~i~~l~~~~~y~~~~~A 273 (305)
T 2nzi_A 254 TRYTVINLFGKTSYQFRVIA 273 (305)
T ss_dssp SEEEECSCCSSCEEEEEEEE
T ss_pred ceEEecCCCCCCeEEEEEEE
Confidence 35689999999999999986
No 210
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=36.66 E-value=1.3e+02 Score=22.89 Aligned_cols=81 Identities=12% Similarity=0.156 Sum_probs=45.3
Q ss_pred EeCcEEEEEecCCCCCCCC--hhHHHHHHHHhccccCCCCCe-EEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcC
Q 017588 188 DAAGVHVVMLGSYTDFDQN--SDQYKWLEADLNKVDRGKTPW-IVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQAR 264 (369)
Q Consensus 188 ~~g~~~~i~lds~~~~~~~--~~q~~Wl~~~L~~~~~~~~~~-~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 264 (369)
..|.+++.++=+...++.. ..-++..+..++. ..+- .|+++....+................+.|..+...++
T Consensus 9 ~~~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~----g~eV~~VFf~~DGV~~a~~~q~p~~~~~~l~~~~~~La~~~g 84 (140)
T 2d1p_A 9 HHGSMRFAIVVTGPAYGTQQASSAFQFAQALIAD----GHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHG 84 (140)
T ss_dssp --CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHT----TCEEEEEEECGGGGGGGBTTCCCCTTSCCHHHHHHHHHHHHC
T ss_pred cCCceEEEEEEcCCCCCcHHHHHHHHHHHHHHHC----CCccCEEEEechHHHHHhcCCCCccccCChHHHHHHHHHHcC
Confidence 3456667666665555432 2334555555544 2333 5788887776554432221111134556777768999
Q ss_pred ceEEEecc
Q 017588 265 VGVVFAGH 272 (369)
Q Consensus 265 v~lvl~GH 272 (369)
+++++|+-
T Consensus 85 v~l~vC~~ 92 (140)
T 2d1p_A 85 VALNICVA 92 (140)
T ss_dssp CEEEEEHH
T ss_pred CEEEEeHH
Confidence 99999974
No 211
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=34.70 E-value=24 Score=28.48 Aligned_cols=20 Identities=5% Similarity=-0.300 Sum_probs=17.7
Q ss_pred EEEEeCCC-CCCCEEEEEeCC
Q 017588 46 HDVVVGPL-KPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L-~p~t~Y~Y~v~~ 65 (369)
..+.|++| .|++.|.++|..
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEE
T ss_pred ceEEEcCCccccccEEEEEEE
Confidence 46789999 999999999976
No 212
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=31.65 E-value=58 Score=27.47 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=24.8
Q ss_pred EEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEeccccc
Q 017588 229 VVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVHA 275 (369)
Q Consensus 229 iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 275 (369)
++++|||++- +.... .. .........+.++++ .+++-|+-.
T Consensus 60 lIitHHp~~f-~~~~~--~~--~~~~~~i~~li~~~I-~ly~~Ht~l 100 (242)
T 2yyb_A 60 FLIVHHGLFW-GKPFP--IV--GHHKRRLETLFQGGI-NLYAAHLPL 100 (242)
T ss_dssp EEEEEECSCS-SCCCC--SC--HHHHHHHHHHHHTTC-EEEECSHHH
T ss_pred EEEECCCcCc-Ccccc--cc--cHHHHHHHHHHHCCC-eEEEeccHH
Confidence 7888999754 33222 11 234455556667788 577888753
No 213
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=31.38 E-value=49 Score=28.37 Aligned_cols=20 Identities=5% Similarity=-0.300 Sum_probs=17.8
Q ss_pred EEEEeCCC-CCCCEEEEEeCC
Q 017588 46 HDVVVGPL-KPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L-~p~t~Y~Y~v~~ 65 (369)
..+.|++| .|++.|.++|..
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A 178 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEA 178 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEE
T ss_pred eEEEECCcCcccccEEEEEEE
Confidence 46789999 999999999986
No 214
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=30.91 E-value=25 Score=36.04 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=24.3
Q ss_pred EEEEeCCCCCCCEEEEEeCC-C-----------CCCeeEEECCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP-D-----------SAQERSFKTPP 77 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~-~-----------~s~~~~F~t~~ 77 (369)
..+.|++|+|+|.|.|+|.. - .|....++|.+
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~ 592 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDA 592 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCC
Confidence 56789999999999999976 1 24455677754
No 215
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=29.29 E-value=1.9e+02 Score=24.13 Aligned_cols=65 Identities=17% Similarity=0.250 Sum_probs=43.2
Q ss_pred CCeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhh-cCCcEEEccCCCC
Q 017588 80 LPIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLA-SQRPWMVTQGNHE 151 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD 151 (369)
+..+++..||.... .+.+.++.+.+...|+|.+.| . .+... +..++.++.+. ..+|++..+++.+
T Consensus 7 ~~~~~it~gDP~~~-~t~~~~~~l~~~GaD~IelG~--S-~g~t~---~~~~~~v~~ir~~~~Pivl~~y~~n 72 (234)
T 2f6u_A 7 RKWRHITKLDPDRT-NTDEIIKAVADSGTDAVMISG--T-QNVTY---EKARTLIEKVSQYGLPIVVEPSDPS 72 (234)
T ss_dssp GGCCEEEEECTTSC-CCHHHHHHHHTTTCSEEEECC--C-TTCCH---HHHHHHHHHHTTSCCCEEECCSSCC
T ss_pred CcceEEEeeCCCcc-ccHHHHHHHHHcCCCEEEECC--C-CCCCH---HHHHHHHHHhcCCCCCEEEecCCcc
Confidence 35688999998543 446677888888999999999 2 22222 22334444443 2599999998853
No 216
>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*
Probab=28.66 E-value=42 Score=27.42 Aligned_cols=22 Identities=23% Similarity=0.217 Sum_probs=18.8
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 017588 44 EIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 44 ~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+..+|.+|.|+|.|.-+|..
T Consensus 158 ~~~~~vi~~L~P~T~YCv~V~~ 179 (199)
T 3s9d_B 158 GNFTYIIDKLIPNTNYCVSVYL 179 (199)
T ss_dssp SEEEEEECSCCSSCEEEEEEEE
T ss_pred CcceEEEeccCCCCcEEEEEEE
Confidence 3468999999999999999864
No 217
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=28.43 E-value=20 Score=32.89 Aligned_cols=20 Identities=30% Similarity=0.576 Sum_probs=17.6
Q ss_pred EEEEeCCCCCCCEEEEEeCC
Q 017588 46 HDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 46 ~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
..+.|.+|.|+|.|..||..
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa 396 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRV 396 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEE
T ss_pred cEEEeccCCCCCeEEEEEEE
Confidence 36789999999999999875
No 218
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=26.28 E-value=69 Score=29.30 Aligned_cols=42 Identities=12% Similarity=0.149 Sum_probs=24.2
Q ss_pred EEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccc
Q 017588 229 VVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVH 274 (369)
Q Consensus 229 iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 274 (369)
++++|||++-.....-... .........+.++++ .+++-|+-
T Consensus 88 lIItHHPlif~~lk~i~~~---~~~~r~i~~li~~~I-avya~HTn 129 (397)
T 2gx8_A 88 VIIAHHPLIFNPLKAIHTD---KAYGKIIEKCIKNDI-AIYAAHTN 129 (397)
T ss_dssp EEEESSCSCCSCCSCCCTT---SHHHHHHHHHHHTTC-EEEECCHH
T ss_pred EEEECCccccCCccccCcC---cHHHHHHHHHHHCCC-eEEEeech
Confidence 7888999754322211111 234455555666778 57788875
No 219
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=26.22 E-value=68 Score=29.07 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=23.6
Q ss_pred EEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccc
Q 017588 229 VVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVH 274 (369)
Q Consensus 229 iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 274 (369)
++++|||++-.....-.... . ......+.++++ .+++-|+-
T Consensus 64 lIItHHPlif~~~k~i~~~~---~-~r~i~~li~~~I-alya~HTn 104 (370)
T 2nyd_A 64 TIISHHPLIFKGVTSLKANG---Y-GLIIRKLIQHDI-NLIAMHTN 104 (370)
T ss_dssp EEEESSCSSCSCCSCCCSST---H-HHHHHHHHHTTC-EEEECCHH
T ss_pred EEEECCCcccCCccccCcCC---H-HHHHHHHHHCCC-eEEEeech
Confidence 78889997543322221222 2 444555566778 57788875
No 220
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=24.91 E-value=2e+02 Score=24.10 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=41.8
Q ss_pred CCeEEEEEeeCCCCCCcHHHHHHHHhcCCCeEEeccccCCCCCChHHHHHHHHhhHhhh-cCCcEEEccCCC
Q 017588 80 LPIKFAIVGDLGQTGWTNSTLQHVAKSNYDMLLLPGDLSYADLDQPLWDSFGRMVEPLA-SQRPWMVTQGNH 150 (369)
Q Consensus 80 ~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNH 150 (369)
+..+++..||.... .+.+.++.+.+...|++...| . .+... +..++.++.+. ..+|++..+++.
T Consensus 7 ~~~~~i~~gDP~~~-~t~~~~~~l~~~GaD~ielG~--S-~Gvt~---~~~~~~v~~ir~~~~Pivlm~y~~ 71 (240)
T 1viz_A 7 TEWKHVFKLDPNKD-LPDEQLEILCESGTDAVIIGG--S-DGVTE---DNVLRMMSKVRRFLVPCVLEVSAI 71 (240)
T ss_dssp GGCCEEEEECTTSC-CCHHHHHHHHTSCCSEEEECC-------CH---HHHHHHHHHHTTSSSCEEEECSCG
T ss_pred CcceEEEeeCCCcc-ccHHHHHHHHHcCCCEEEECC--C-CCCCH---HHHHHHHHHhhCcCCCEEEecCcc
Confidence 35688999998544 456678888888999999999 2 12211 22334444433 258999988884
No 221
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=22.64 E-value=1e+02 Score=26.01 Aligned_cols=40 Identities=10% Similarity=0.209 Sum_probs=22.3
Q ss_pred EEEeccCccc-cCCCCCCCcchHHHHHHHHHHHHhcCceEEEecccc
Q 017588 229 VVLIHAPWYN-TNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHVH 274 (369)
Q Consensus 229 iv~~H~P~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 274 (369)
++++|||++- .... .-.. ........+.++++ .+++-|+-
T Consensus 59 lIitHHP~~f~~~~~-~i~~----~~~~~i~~li~~~I-~ly~~Htn 99 (247)
T 1nmo_A 59 AVIVHHGYFWKGESP-VIRG----MKRNRLKTLLANDI-NLYGWHLP 99 (247)
T ss_dssp EEEEEECSCCTTSCC-CCCT----HHHHHHHHHHHTTC-EEEECCHH
T ss_pred EEEECCchhccCCCc-cccc----hHHHHHHHHHHCCC-EEEEeeec
Confidence 7888999754 2221 1111 12444555566777 56777763
No 222
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=21.94 E-value=70 Score=23.33 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=21.0
Q ss_pred ccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 41 KSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 41 ~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.++-.-.|..+||.|++.|+--...
T Consensus 13 ~DGq~VtV~~tGl~p~~~y~v~~Ca 37 (112)
T 2mcm_A 13 SNGQTVTVSATGLTPGTVYHVGQCA 37 (112)
T ss_dssp CTTEEEEEEEESCCTTCEEEEEEEE
T ss_pred CCCCEEEEEEEccCCCCeEEEEEcc
Confidence 5677888999999999999987654
No 223
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=21.10 E-value=70 Score=23.37 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=20.9
Q ss_pred ccceEEEEEeCCCCCCCEEEEEeCC
Q 017588 41 KSGEIHDVVVGPLKPNTVYYYRCGP 65 (369)
Q Consensus 41 ~~~~~~~~~l~~L~p~t~Y~Y~v~~ 65 (369)
.++-.-.|..+||.|++.|+--...
T Consensus 14 ~DGq~VtV~~tGl~p~~~y~v~~Ca 38 (113)
T 1noa_A 14 SDGTVVKVAGAGLQAGTAYDVGQCA 38 (113)
T ss_dssp CTTCEEEEEEESCCTTCEEEEEEEE
T ss_pred CCCCEEEEEEEccCCCCeEEEEEcc
Confidence 4677888999999999999987654
No 224
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=20.29 E-value=2.6e+02 Score=20.46 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=36.0
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccCccccCCCCCCCcchHHHHHHHHHHHHhcCceEEEeccc
Q 017588 209 QYKWLEADLNKVDRGKTPWIVVLIHAPWYNTNTAHQGEVESEGMRKAMEGLIHQARVGVVFAGHV 273 (369)
Q Consensus 209 q~~Wl~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~ 273 (369)
-+......++.- ...+.|++.....+................+.|..+.+++++.+++|+..
T Consensus 20 al~~a~a~~~~g---~~v~~vff~~dGV~~~~~~~~p~~~~~~l~~~~~~L~~~~gv~l~vC~~~ 81 (130)
T 2hy5_A 20 AYQFAKAALEKG---HEIFRVFFYHDGVNNSTRLTTPPQDDRHIVNRWAELAEQYELDMVVCVAA 81 (130)
T ss_dssp HHHHHHHHHHTT---CEEEEEEECGGGGGGGBSCCCCCTTSCCHHHHHHHHHHHHTCCEEEEHHH
T ss_pred HHHHHHHHHhcC---CeeCEEEEechHHHHHhcCCCCCcccCCHHHHHHHHHHHcCCeEEEeHHH
Confidence 345555555442 12237888887776544332111111135567888888889999999864
Done!