Query 017590
Match_columns 369
No_of_seqs 244 out of 3819
Neff 10.5
Searched_HMMs 13730
Date Mon Mar 25 16:53:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017590.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017590hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 7.2E-24 5.2E-28 186.0 14.2 246 41-288 51-307 (313)
2 d1xkua_ c.10.2.7 (A:) Decorin 99.9 3.4E-22 2.5E-26 174.6 24.0 256 21-283 12-283 (305)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.7E-23 1.3E-27 183.6 11.4 248 18-267 49-307 (313)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.9 8.6E-21 6.3E-25 165.5 25.0 247 8-262 21-283 (305)
5 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.8E-21 3.5E-25 172.5 23.9 258 17-288 42-366 (384)
6 d2omza2 c.10.2.1 (A:33-416) In 99.9 5.1E-21 3.7E-25 172.3 19.9 261 8-281 55-382 (384)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 1.1E-19 7.8E-24 156.8 20.4 215 23-262 15-236 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 2.6E-20 1.9E-24 160.7 16.1 211 7-241 21-238 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.8 2.9E-19 2.1E-23 152.5 18.6 196 18-241 9-208 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.8 1.9E-18 1.4E-22 147.3 19.1 190 44-262 14-206 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 4.9E-18 3.6E-22 150.6 21.6 67 227-298 283-349 (353)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 4.1E-17 3E-21 135.5 14.8 123 131-259 103-225 (227)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 2E-15 1.4E-19 133.5 25.3 256 2-280 44-352 (353)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 2E-17 1.5E-21 137.4 10.4 207 18-237 18-226 (227)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.7 1.8E-17 1.3E-21 142.3 6.2 217 22-238 3-235 (284)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 3.8E-16 2.8E-20 130.9 13.9 213 22-258 11-232 (242)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.3E-15 9.2E-20 123.6 14.9 161 86-256 39-199 (199)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.2E-15 8.8E-20 124.8 13.8 165 86-260 45-209 (210)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 9.6E-16 7E-20 128.4 12.7 200 8-234 19-231 (242)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.6 7.1E-15 5.2E-19 119.1 14.3 161 62-233 39-199 (199)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.8E-14 1.3E-18 117.7 14.9 164 63-237 46-209 (210)
22 d2astb2 c.10.1.3 (B:2136-2419) 99.5 2.9E-15 2.1E-19 128.4 6.2 175 41-215 47-235 (284)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.5 1.2E-13 8.8E-18 111.0 10.8 127 21-148 10-139 (192)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.4 4.3E-13 3.1E-17 99.3 10.5 97 163-261 2-100 (124)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 1.3E-13 9.3E-18 110.9 6.9 128 43-172 11-139 (192)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 6.4E-13 4.6E-17 103.3 9.8 128 12-142 11-146 (162)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.4 9.9E-13 7.2E-17 97.3 9.8 116 138-256 1-122 (124)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2.3E-13 1.7E-17 105.9 6.4 104 157-261 16-122 (162)
29 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.3 1.6E-13 1.2E-17 120.8 2.6 221 41-261 32-312 (344)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.2 2.4E-13 1.8E-17 124.0 -1.4 81 17-98 25-123 (460)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.2 6.2E-13 4.5E-17 117.0 0.0 228 54-282 22-312 (344)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 8.8E-14 6.4E-18 112.1 -8.1 113 148-262 37-151 (198)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 2E-12 1.5E-16 117.8 0.0 103 20-123 3-124 (460)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 2.1E-12 1.5E-16 103.9 -3.4 101 41-146 49-151 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.0 8.7E-10 6.3E-14 84.6 9.6 102 161-262 10-114 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 1.3E-08 9.5E-13 77.8 9.5 101 45-146 13-114 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.0 5.5E-07 4E-11 69.0 0.5 37 85-121 63-101 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.8 1.5E-07 1.1E-11 72.2 -4.7 59 204-262 64-126 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.7 1.7E-05 1.2E-09 60.7 4.9 87 58-144 39-140 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 6.8E-06 4.9E-10 63.0 0.5 62 180-241 42-113 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.0 0.00023 1.7E-08 54.0 3.7 62 61-122 15-85 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.0 0.00037 2.7E-08 52.8 4.9 104 41-144 18-141 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.90 E-value=7.2e-24 Score=186.05 Aligned_cols=246 Identities=22% Similarity=0.269 Sum_probs=203.4
Q ss_pred CeeEEEcCCcccc---ccCcccCCCCCCCEEeCcCc-ccccccchhhccCCcCcEEecCCCcCcccCchhhhccCcccee
Q 017590 41 NVVELNLMCTPIE---EVPLSIECLPNLETLEMSFC-NSLKRLSTSICKLKSLRSLDLSYCINLESFPEILEKMELLEEI 116 (369)
Q Consensus 41 ~L~~L~l~~~~~~---~l~~~~~~l~~L~~L~l~~~-~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L 116 (369)
+++.|+++++.+. .+|..++.+++|++|++++| ...+.+|..++++++|++|++++|......+..+..+.+|+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 7999999887776 57888999999999999874 5556889999999999999999988777778889999999999
Q ss_pred cccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcch-hhhccCcccCCC-CCccccCCCCCcEEEeccCC-
Q 017590 117 NLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSL-ERLHAGLLAIPQ-APSSIVDLNKLETLSLFECR- 193 (369)
Q Consensus 117 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L-~~L~l~~~~~~~-~~~~~~~~~~L~~L~l~~~~- 193 (369)
++++|.....+|..+.+++.++.+++++|...+.+|..+..+.++ +.+.+.+|.++. .+..+..+. ...+++.++.
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 999888888888999999999999999987777788878777775 778888888774 344555544 4468888776
Q ss_pred CcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCC-ccchhhccCCCCCEeccccccccc-cCCCc-
Q 017590 194 GLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIE-SLPTSISQLSRLRWLYLVNCVKLQ-SLPEL- 270 (369)
Q Consensus 194 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~l~-~~~~~- 270 (369)
...++..+..+++++.++++++.+...+..+..+++|++|++++|+++ .+|..++.+++|++|++++| .++ .+|+.
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N-~l~g~iP~~~ 288 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN-NLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS-EEEEECCCST
T ss_pred cccccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCC-cccccCCCcc
Confidence 455667778889999999999998876666888899999999999999 89999999999999999998 454 67764
Q ss_pred -CcccceecccCCcccccC
Q 017590 271 -PLLLVMLGASDCKRLQFL 288 (369)
Q Consensus 271 -~~~L~~L~l~~c~~L~~l 288 (369)
..+|+.+++.+++.+.-.
T Consensus 289 ~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 289 NLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TGGGSCGGGTCSSSEEEST
T ss_pred cCCCCCHHHhCCCccccCC
Confidence 357788888887766543
No 2
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90 E-value=3.4e-22 Score=174.58 Aligned_cols=256 Identities=20% Similarity=0.200 Sum_probs=152.4
Q ss_pred ccEEecCCCCCccccCCccC-CeeEEEcCCccccccCc-ccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCCc
Q 017590 21 SIKIDCYKCVNLREFPRISG-NVVELNLMCTPIEEVPL-SIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCI 98 (369)
Q Consensus 21 L~~L~l~~~~~~~~~~~~~~-~L~~L~l~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 98 (369)
.+.++.++.. ++.+|..++ ++++|++++|+++.++. .|.++++|++|++++|......+..|.++++|++|++++|.
T Consensus 12 ~~~~~C~~~~-L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~ 90 (305)
T d1xkua_ 12 LRVVQCSDLG-LEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90 (305)
T ss_dssp TTEEECTTSC-CCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCC-CCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc
Confidence 4556666555 666665444 67777777777776664 46667777777777766555445556667777777777654
Q ss_pred CcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCC--CCCCcccCCCcchhhhccCcccCCCCCc
Q 017590 99 NLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKL--GSLPESLGNLKSLERLHAGLLAIPQAPS 176 (369)
Q Consensus 99 ~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 176 (369)
. +.+|.. ....++.|++.++......+..+........+....+... ...+..+..+++|+.+++.++.+..++.
T Consensus 91 l-~~l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~ 167 (305)
T d1xkua_ 91 L-KELPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ 167 (305)
T ss_dssp C-SBCCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCS
T ss_pred c-CcCccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCc
Confidence 3 334432 2345666666654433333334445555556655543322 1222334556666666777766666554
Q ss_pred cccCCCCCcEEEeccCCCc-CCCcccCCCCCCcEEeccCCCCccC-CCCCCCCCCCCEEEcCCCCCCccchhhccCCCCC
Q 017590 177 SIVDLNKLETLSLFECRGL-VLPPLLSGLSSLKKLELGDCEIMEI-PPDIGCLSSLESLNLSGNNIESLPTSISQLSRLR 254 (369)
Q Consensus 177 ~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~ 254 (369)
.+ +++|++|++++|... ..+..+..++.++.|++++|.+.++ +.++..+++|++|++++|+++.+|..+..+++|+
T Consensus 168 ~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~ 245 (305)
T d1xkua_ 168 GL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 245 (305)
T ss_dssp SC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCC
T ss_pred cc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCC
Confidence 33 466777777766633 3344566666777777777777663 3445666777777777777777776667777777
Q ss_pred EeccccccccccCCC----------cCcccceecccCCc
Q 017590 255 WLYLVNCVKLQSLPE----------LPLLLVMLGASDCK 283 (369)
Q Consensus 255 ~L~l~~~~~l~~~~~----------~~~~L~~L~l~~c~ 283 (369)
+|++++| +++.++. ...+|+.+++.+++
T Consensus 246 ~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 246 VVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp EEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred EEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 7777776 4555532 12446666666654
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.89 E-value=1.7e-23 Score=183.60 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=204.9
Q ss_pred CCCccEEecCCCCCcc--ccCCccC---CeeEEEcCC-cccc-ccCcccCCCCCCCEEeCcCcccccccchhhccCCcCc
Q 017590 18 FISSIKIDCYKCVNLR--EFPRISG---NVVELNLMC-TPIE-EVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLR 90 (369)
Q Consensus 18 ~~~L~~L~l~~~~~~~--~~~~~~~---~L~~L~l~~-~~~~-~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~ 90 (369)
..+++.|+++++.... .+|..++ +|++|++++ +.+. .+|..++++++|++|++++|......+..+..+.+|+
T Consensus 49 ~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 49 TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred cEEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhc
Confidence 3469999999987333 4676555 999999964 7776 7999999999999999999988777777788899999
Q ss_pred EEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCC-CeEeecCCCCCCCCCcccCCCcchhhhccCcc
Q 017590 91 SLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGL-KQLKLTGCTKLGSLPESLGNLKSLERLHAGLL 169 (369)
Q Consensus 91 ~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 169 (369)
++++++|.....+|..+..+++++++++++|...+.+|..+..+..+ +.+.++++...+..+..+..+..+ .+++..+
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~ 207 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSS
T ss_pred ccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 99999998888899999999999999999888777888888888776 778888766555566656555443 5777766
Q ss_pred cCC-CCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCcc-CCCCCCCCCCCCEEEcCCCCCC-ccchh
Q 017590 170 AIP-QAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIME-IPPDIGCLSSLESLNLSGNNIE-SLPTS 246 (369)
Q Consensus 170 ~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~L~~L~l~~~~l~-~~~~~ 246 (369)
... .++..+..+++++.+++.++.....+..+..+++|+.|++++|++++ +|..++.+++|++|++++|+++ .+|.
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~- 286 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-
Confidence 655 45666778899999999999855555567888999999999999995 8989999999999999999999 7774
Q ss_pred hccCCCCCEeccccccccccC
Q 017590 247 ISQLSRLRWLYLVNCVKLQSL 267 (369)
Q Consensus 247 ~~~~~~L~~L~l~~~~~l~~~ 267 (369)
++.+++|+.+++++|..+...
T Consensus 287 ~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp STTGGGSCGGGTCSSSEEEST
T ss_pred cccCCCCCHHHhCCCccccCC
Confidence 578899999999999766654
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.88 E-value=8.6e-21 Score=165.55 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=198.5
Q ss_pred CCccCCCCcCCCCccEEecCCCCCccccCC-ccC---CeeEEEcCCcccccc-CcccCCCCCCCEEeCcCcccccccchh
Q 017590 8 SLRCFPQNIHFISSIKIDCYKCVNLREFPR-ISG---NVVELNLMCTPIEEV-PLSIECLPNLETLEMSFCNSLKRLSTS 82 (369)
Q Consensus 8 ~l~~~p~~~~~~~L~~L~l~~~~~~~~~~~-~~~---~L~~L~l~~~~~~~l-~~~~~~l~~L~~L~l~~~~~~~~~~~~ 82 (369)
+++++|..+ .+++++|++++|. ++.+++ .+. +|++|+++++.+..+ +..+..+++|++|++++|.. +.+|..
T Consensus 21 ~L~~lP~~l-~~~l~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l-~~l~~~ 97 (305)
T d1xkua_ 21 GLEKVPKDL-PPDTALLDLQNNK-ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEK 97 (305)
T ss_dssp CCCSCCCSC-CTTCCEEECCSSC-CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC-SBCCSS
T ss_pred CCCccCCCC-CCCCCEEECcCCc-CCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCcc-CcCccc
Confidence 589999877 4789999999998 888875 333 999999999999877 45689999999999999754 455643
Q ss_pred hccCCcCcEEecCCCcCcccCchhhhccCccceeccccccccc--ccchhhhcccCCCeEeecCCCCCCCCCcccCCCcc
Q 017590 83 ICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIK--ELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKS 160 (369)
Q Consensus 83 ~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 160 (369)
....++.|++..+......+..+.....++.++...+.... ..+..+..+++|+.+++.+|. +..++.. ..++
T Consensus 98 --~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~-l~~l~~~--~~~~ 172 (305)
T d1xkua_ 98 --MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN-ITTIPQG--LPPS 172 (305)
T ss_dssp --CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC-CCSCCSS--CCTT
T ss_pred --hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCC-ccccCcc--cCCc
Confidence 35789999999876665555667778888888887654333 344567888999999999865 4455543 3678
Q ss_pred hhhhccCcccCCCC-CccccCCCCCcEEEeccCCCcCC-CcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCC
Q 017590 161 LERLHAGLLAIPQA-PSSIVDLNKLETLSLFECRGLVL-PPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGN 238 (369)
Q Consensus 161 L~~L~l~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~ 238 (369)
+++|++.++..... +..+..++.++.|++++|....+ +..+.++++|++|++++|+++++|.++..+++|++|++++|
T Consensus 173 L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N 252 (305)
T d1xkua_ 173 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNN 252 (305)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSS
T ss_pred cCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCCEEECCCC
Confidence 99999999987743 56788899999999999986665 45778899999999999999999988999999999999999
Q ss_pred CCCccchh-------hccCCCCCEecccccc
Q 017590 239 NIESLPTS-------ISQLSRLRWLYLVNCV 262 (369)
Q Consensus 239 ~l~~~~~~-------~~~~~~L~~L~l~~~~ 262 (369)
+++.++.. ....++|+.|++++|+
T Consensus 253 ~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 253 NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 99977643 2356789999999996
No 5
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88 E-value=4.8e-21 Score=172.52 Aligned_cols=258 Identities=21% Similarity=0.294 Sum_probs=168.0
Q ss_pred CCCCccEEecCCCCCccccCC--ccCCeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccccchhhccCCcCcEEec
Q 017590 17 HFISSIKIDCYKCVNLREFPR--ISGNVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDL 94 (369)
Q Consensus 17 ~~~~L~~L~l~~~~~~~~~~~--~~~~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l 94 (369)
.+.+|++|+++++. ++++.. .+.+|++|++++|.++.++. ++.+++|++|++++|.... +++ ++++++|+.|++
T Consensus 42 ~l~~l~~L~l~~~~-I~~l~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~-i~~-l~~l~~L~~L~~ 117 (384)
T d2omza2 42 DLDQVTTLQADRLG-IKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGLTL 117 (384)
T ss_dssp HHTTCCEEECCSSC-CCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred HhCCCCEEECCCCC-CCCccccccCCCCCEEeCcCCcCCCCcc-ccCCccccccccccccccc-ccc-cccccccccccc
Confidence 45567777777666 555532 23377777777777766654 6667777777777765432 332 566677777766
Q ss_pred CCCcCccc---------------------------------------------------------------CchhhhccC
Q 017590 95 SYCINLES---------------------------------------------------------------FPEILEKME 111 (369)
Q Consensus 95 ~~~~~~~~---------------------------------------------------------------~~~~~~~l~ 111 (369)
+++..... .......++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (384)
T d2omza2 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 197 (384)
T ss_dssp CSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 55432110 012345567
Q ss_pred ccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEecc
Q 017590 112 LLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFE 191 (369)
Q Consensus 112 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~ 191 (369)
++++++++++... .++. ...+++|+.+++++|. +..++ .+..+++|+.+++.+|.+..++ .+..+++|++|++++
T Consensus 198 ~~~~l~l~~n~i~-~~~~-~~~~~~L~~L~l~~n~-l~~~~-~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~L~~L~l~~ 272 (384)
T d2omza2 198 NLESLIATNNQIS-DITP-LGILTNLDELSLNGNQ-LKDIG-TLASLTNLTDLDLANNQISNLA-PLSGLTKLTELKLGA 272 (384)
T ss_dssp TCSEEECCSSCCC-CCGG-GGGCTTCCEEECCSSC-CCCCG-GGGGCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCS
T ss_pred ccceeeccCCccC-CCCc-ccccCCCCEEECCCCC-CCCcc-hhhcccccchhccccCccCCCC-cccccccCCEeeccC
Confidence 7888888865433 3322 4567788888888864 44443 4677888888888888887764 367788888888888
Q ss_pred CCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCccchhhccCCCCCEeccccccccccCCC--
Q 017590 192 CRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPTSISQLSRLRWLYLVNCVKLQSLPE-- 269 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~~-- 269 (369)
+....++. +..++.++.+.+.+|.+.++. .+..++++++|++++|+++.++ .+..+++|++|++++| .+++++.
T Consensus 273 ~~l~~~~~-~~~~~~l~~l~~~~n~l~~~~-~~~~~~~l~~L~ls~n~l~~l~-~l~~l~~L~~L~L~~n-~l~~l~~l~ 348 (384)
T d2omza2 273 NQISNISP-LAGLTALTNLELNENQLEDIS-PISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANN-KVSDVSSLA 348 (384)
T ss_dssp SCCCCCGG-GTTCTTCSEEECCSSCCSCCG-GGGGCTTCSEEECCSSCCSCCG-GGGGCTTCCEEECCSS-CCCCCGGGG
T ss_pred cccCCCCc-ccccccccccccccccccccc-ccchhcccCeEECCCCCCCCCc-ccccCCCCCEEECCCC-CCCCChhHc
Confidence 87665554 566777788888877776643 2566777888888888777665 3677788888888877 5555543
Q ss_pred cCcccceecccCCcccccC
Q 017590 270 LPLLLVMLGASDCKRLQFL 288 (369)
Q Consensus 270 ~~~~L~~L~l~~c~~L~~l 288 (369)
..++|++|+++++ +++.+
T Consensus 349 ~l~~L~~L~l~~N-~l~~l 366 (384)
T d2omza2 349 NLTNINWLSAGHN-QISDL 366 (384)
T ss_dssp GCTTCCEEECCSS-CCCBC
T ss_pred CCCCCCEEECCCC-cCCCC
Confidence 2356777777665 34444
No 6
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.86 E-value=5.1e-21 Score=172.33 Aligned_cols=261 Identities=21% Similarity=0.306 Sum_probs=174.6
Q ss_pred CCccCCCCcCCCCccEEecCCCCCccccCCcc--CCeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccc-------
Q 017590 8 SLRCFPQNIHFISSIKIDCYKCVNLREFPRIS--GNVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKR------- 78 (369)
Q Consensus 8 ~l~~~p~~~~~~~L~~L~l~~~~~~~~~~~~~--~~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~------- 78 (369)
++++++....+++|++|++++|. ++.++... .+|++|+++++.+..++. ++.+++|+.|+++++.....
T Consensus 55 ~I~~l~gl~~L~nL~~L~Ls~N~-l~~l~~l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~~~~~~~~~~~~~~~ 132 (384)
T d2omza2 55 GIKSIDGVEYLNNLTQINFSNNQ-LTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDPLKNLT 132 (384)
T ss_dssp CCCCCTTGGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGTTCT
T ss_pred CCCCccccccCCCCCEEeCcCCc-CCCCccccCCcccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 35566544477888888888886 77776433 278888888888776654 67778888888776442210
Q ss_pred --------------------------------------------------------cchhhccCCcCcEEecCCCcCccc
Q 017590 79 --------------------------------------------------------LSTSICKLKSLRSLDLSYCINLES 102 (369)
Q Consensus 79 --------------------------------------------------------~~~~~~~l~~L~~L~l~~~~~~~~ 102 (369)
.......+++++.++++++.....
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~ 212 (384)
T d2omza2 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDI 212 (384)
T ss_dssp TCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCC
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCC
Confidence 012234466777777777644332
Q ss_pred CchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCC
Q 017590 103 FPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLN 182 (369)
Q Consensus 103 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 182 (369)
.+ ...+++|++|++++|. ++.++ .+..+++|+.+++++|.. ..++ .+..+++|++++++++.+..++ .+..+.
T Consensus 213 ~~--~~~~~~L~~L~l~~n~-l~~~~-~l~~l~~L~~L~l~~n~l-~~~~-~~~~~~~L~~L~l~~~~l~~~~-~~~~~~ 285 (384)
T d2omza2 213 TP--LGILTNLDELSLNGNQ-LKDIG-TLASLTNLTDLDLANNQI-SNLA-PLSGLTKLTELKLGANQISNIS-PLAGLT 285 (384)
T ss_dssp GG--GGGCTTCCEEECCSSC-CCCCG-GGGGCTTCSEEECCSSCC-CCCG-GGTTCTTCSEEECCSSCCCCCG-GGTTCT
T ss_pred Cc--ccccCCCCEEECCCCC-CCCcc-hhhcccccchhccccCcc-CCCC-cccccccCCEeeccCcccCCCC-cccccc
Confidence 22 4566778888888664 33333 466778888888887653 3333 3667778888888888777664 356677
Q ss_pred CCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCccchhhccCCCCCEecccccc
Q 017590 183 KLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPTSISQLSRLRWLYLVNCV 262 (369)
Q Consensus 183 ~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~ 262 (369)
.++.+.+..+....++. +..+++++.|++++|.+.+++. +..+++|++|++++|.++.++ .+..+++|++|++++|
T Consensus 286 ~l~~l~~~~n~l~~~~~-~~~~~~l~~L~ls~n~l~~l~~-l~~l~~L~~L~L~~n~l~~l~-~l~~l~~L~~L~l~~N- 361 (384)
T d2omza2 286 ALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFANNKVSDVS-SLANLTNINWLSAGHN- 361 (384)
T ss_dssp TCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSS-
T ss_pred ccccccccccccccccc-cchhcccCeEECCCCCCCCCcc-cccCCCCCEEECCCCCCCCCh-hHcCCCCCCEEECCCC-
Confidence 78888888777655443 5667788888888888877643 667788888888888887766 4777888888888877
Q ss_pred ccccCCC--cCcccceecccC
Q 017590 263 KLQSLPE--LPLLLVMLGASD 281 (369)
Q Consensus 263 ~l~~~~~--~~~~L~~L~l~~ 281 (369)
.++++++ ..++|+.|++++
T Consensus 362 ~l~~l~~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 362 QISDLTPLANLTRITQLGLND 382 (384)
T ss_dssp CCCBCGGGTTCTTCSEEECCC
T ss_pred cCCCChhhccCCCCCEeeCCC
Confidence 5666543 224566666554
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.1e-19 Score=156.79 Aligned_cols=215 Identities=25% Similarity=0.277 Sum_probs=136.8
Q ss_pred EEecCCCCCccccCCccC-CeeEEEcCCccccccCc-ccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCc
Q 017590 23 KIDCYKCVNLREFPRISG-NVVELNLMCTPIEEVPL-SIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINL 100 (369)
Q Consensus 23 ~L~l~~~~~~~~~~~~~~-~L~~L~l~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 100 (369)
.++.+++. ++.+|..++ .+++|++++|.++.++. .+..+++|++|+++++......+..+..+..++.+....+...
T Consensus 15 ~v~c~~~~-L~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 15 TTSCPQQG-LQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp EEECCSSC-CSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EEEcCCCC-CCccCCCCCCCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 34555544 777776555 77777777777777664 4667777777777776554444445555666666665544333
Q ss_pred ccC-chhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCC-ccc
Q 017590 101 ESF-PEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAP-SSI 178 (369)
Q Consensus 101 ~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~ 178 (369)
..+ +..+.++++|++|++++| ......+..+...++|+.+++.+|.++.++ ..+
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n------------------------~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f 149 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRC------------------------GLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTS------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccccchhhcccccCCEEecCCc------------------------ccccccccccchhcccchhhhccccccccChhHh
Confidence 332 344455555555555543 322222233444555555666666665554 345
Q ss_pred cCCCCCcEEEeccCCCcCCC-cccCCCCCCcEEeccCCCCcc-CCCCCCCCCCCCEEEcCCCCCCccc-hhhccCCCCCE
Q 017590 179 VDLNKLETLSLFECRGLVLP-PLLSGLSSLKKLELGDCEIME-IPPDIGCLSSLESLNLSGNNIESLP-TSISQLSRLRW 255 (369)
Q Consensus 179 ~~~~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~L~~L~l~~~~l~~~~-~~~~~~~~L~~ 255 (369)
..+++|++|++++|....++ ..+.++++|+.+++++|.+.. .+..+..+++|++|++++|.+..++ ..++.+++|++
T Consensus 150 ~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~ 229 (284)
T d1ozna_ 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (284)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCE
Confidence 56677778888777755554 466777888888888888877 4566777888888888888888655 55677888888
Q ss_pred ecccccc
Q 017590 256 LYLVNCV 262 (369)
Q Consensus 256 L~l~~~~ 262 (369)
|++++|+
T Consensus 230 L~l~~N~ 236 (284)
T d1ozna_ 230 LRLNDNP 236 (284)
T ss_dssp EECCSSC
T ss_pred EEecCCC
Confidence 8888774
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.6e-20 Score=160.69 Aligned_cols=211 Identities=21% Similarity=0.243 Sum_probs=136.5
Q ss_pred CCCccCCCCcCCCCccEEecCCCCCccccCCc-cC---CeeEEEcCCccccccCc-ccCCCCCCCEEeCcCccccccc-c
Q 017590 7 ESLRCFPQNIHFISSIKIDCYKCVNLREFPRI-SG---NVVELNLMCTPIEEVPL-SIECLPNLETLEMSFCNSLKRL-S 80 (369)
Q Consensus 7 ~~l~~~p~~~~~~~L~~L~l~~~~~~~~~~~~-~~---~L~~L~l~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~-~ 80 (369)
.+++++|..+ .+++++|++++|. ++.++.. +. +|++|+++++.+..++. .+..+..++.+.+..+.....+ +
T Consensus 21 ~~L~~iP~~i-p~~~~~L~Ls~N~-i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~ 98 (284)
T d1ozna_ 21 QGLQAVPVGI-PAASQRIFLHGNR-ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98 (284)
T ss_dssp SCCSSCCTTC-CTTCSEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCT
T ss_pred CCCCccCCCC-CCCCCEEECcCCc-CCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3488898876 4679999999998 7888753 33 89999999999987665 4667788999988766665555 5
Q ss_pred hhhccCCcCcEEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcc
Q 017590 81 TSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKS 160 (369)
Q Consensus 81 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 160 (369)
..++++++|++|++++|......+..+..+.+|+.+++.+|......+..+..+++|+.|++++|......+..+..+++
T Consensus 99 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~ 178 (284)
T d1ozna_ 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178 (284)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccc
Confidence 56888999999999998765555566777888888888865543333445566666777766665432222333444444
Q ss_pred hhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCC-CCCCCCCCCCEEEcCCCC
Q 017590 161 LERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIP-PDIGCLSSLESLNLSGNN 239 (369)
Q Consensus 161 L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~ 239 (369)
|+.+.+.+|.+..+ .|..+..+++|++|++++|.+.+++ ..+..+++|++|++++|.
T Consensus 179 L~~l~l~~N~l~~i----------------------~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 179 LDRLLLHQNRVAHV----------------------HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CCEEECCSSCCCEE----------------------CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred cchhhhhhcccccc----------------------ChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 44444444444422 1334445555555555555555432 234455555556655554
Q ss_pred CC
Q 017590 240 IE 241 (369)
Q Consensus 240 l~ 241 (369)
+.
T Consensus 237 l~ 238 (284)
T d1ozna_ 237 WV 238 (284)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.9e-19 Score=152.50 Aligned_cols=196 Identities=23% Similarity=0.221 Sum_probs=123.4
Q ss_pred CCCccEEecCCCCCccccCCccC-CeeEEEcCCccccccCc-ccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecC
Q 017590 18 FISSIKIDCYKCVNLREFPRISG-NVVELNLMCTPIEEVPL-SIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLS 95 (369)
Q Consensus 18 ~~~L~~L~l~~~~~~~~~~~~~~-~L~~L~l~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~ 95 (369)
...+...+.+++. ++.+|+.++ ++++|++++|.++.++. .|..+++|++|++++|.. ..++. ++.+++|++|+++
T Consensus 9 ~~~~~~v~C~~~~-L~~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l-~~l~~-~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 9 VASHLEVNCDKRN-LTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQV-DGTLPVLGTLDLS 85 (266)
T ss_dssp STTCCEEECTTSC-CSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCC-CEEEC-CSCCTTCCEEECC
T ss_pred cCCCeEEEccCCC-CCeeCcCcCcCCCEEECcCCcCCCcCHHHhhccccccccccccccc-ccccc-ccccccccccccc
Confidence 3445556777666 777776554 77788887777776663 567777777787777644 34443 4567777777777
Q ss_pred CCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCC
Q 017590 96 YCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAP 175 (369)
Q Consensus 96 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 175 (369)
+|.. ...+..+..+++|++|+++++......+ ..+..+.+++.+++.+|.+..++
T Consensus 86 ~N~l-~~~~~~~~~l~~L~~L~l~~~~~~~~~~------------------------~~~~~l~~l~~L~l~~n~l~~l~ 140 (266)
T d1p9ag_ 86 HNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPL------------------------GALRGLGELQELYLKGNELKTLP 140 (266)
T ss_dssp SSCC-SSCCCCTTTCTTCCEEECCSSCCCCCCS------------------------STTTTCTTCCEEECTTSCCCCCC
T ss_pred cccc-cccccccccccccccccccccccceeec------------------------cccccccccccccccccccceec
Confidence 7543 3334445555555555555443333222 33344455555555555555444
Q ss_pred c-cccCCCCCcEEEeccCCCcCCC-cccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCC
Q 017590 176 S-SIVDLNKLETLSLFECRGLVLP-PLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIE 241 (369)
Q Consensus 176 ~-~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~ 241 (369)
. .+..+++++.+++++|....++ ..+..+++|++|++++|++..+|..+..+++|+.|+|++|.+.
T Consensus 141 ~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCCC
Confidence 3 3345667777777777765555 3466677788888888887777777777788888888877554
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.9e-18 Score=147.35 Aligned_cols=190 Identities=23% Similarity=0.267 Sum_probs=130.9
Q ss_pred EEEcCCccccccCcccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCcccCchhhhccCccceeccccccc
Q 017590 44 ELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASN 123 (369)
Q Consensus 44 ~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 123 (369)
+++.++++++.+|..+. +++++|+|++|......+..|.++++|++|++++|.. +.++
T Consensus 14 ~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l-~~l~------------------- 71 (266)
T d1p9ag_ 14 EVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQ------------------- 71 (266)
T ss_dssp EEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCC-CEEE-------------------
T ss_pred EEEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccc-cccc-------------------
Confidence 34555555555554332 3556666665443322223455555555555555432 2222
Q ss_pred ccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCC-ccccCCCCCcEEEeccCCCcCCCc-cc
Q 017590 124 IKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAP-SSIVDLNKLETLSLFECRGLVLPP-LL 201 (369)
Q Consensus 124 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~-~~ 201 (369)
. +..+++|+.|++++|. +...+..+..+++|+.++++++.+..++ ..+..+.++++|.+++|....++. .+
T Consensus 72 -----~-~~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~ 144 (266)
T d1p9ag_ 72 -----V-DGTLPVLGTLDLSHNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL 144 (266)
T ss_dssp -----C-CSCCTTCCEEECCSSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred -----c-cccccccccccccccc-ccccccccccccccccccccccccceeeccccccccccccccccccccceeccccc
Confidence 1 2345556666666543 3344445666777777777777776554 455678899999999999777764 56
Q ss_pred CCCCCCcEEeccCCCCccCCC-CCCCCCCCCEEEcCCCCCCccchhhccCCCCCEecccccc
Q 017590 202 SGLSSLKKLELGDCEIMEIPP-DIGCLSSLESLNLSGNNIESLPTSISQLSRLRWLYLVNCV 262 (369)
Q Consensus 202 ~~~~~L~~L~l~~~~~~~~~~-~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~ 262 (369)
..+++++.+++++|++..++. .+..+++|++|++++|+++.+|..+..+++|+.|++++|+
T Consensus 145 ~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred cccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCC
Confidence 678999999999999999654 4788999999999999999999999999999999999985
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.79 E-value=4.9e-18 Score=150.55 Aligned_cols=67 Identities=34% Similarity=0.451 Sum_probs=51.3
Q ss_pred CCCCCEEEcCCCCCCccchhhccCCCCCEeccccccccccCCCcCcccceecccCCcccccCCCchhhhHHh
Q 017590 227 LSSLESLNLSGNNIESLPTSISQLSRLRWLYLVNCVKLQSLPELPLLLVMLGASDCKRLQFLPELTSCLEEL 298 (369)
Q Consensus 227 ~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~L~~L~l~~c~~L~~l~~~~~~l~~l 298 (369)
+++|++|++++|.++.+|. .+++|+.|++++| .++++|+.+.+|++|++++|+ |+.++..+.++++|
T Consensus 283 ~~~L~~L~Ls~N~l~~lp~---~~~~L~~L~L~~N-~L~~l~~~~~~L~~L~L~~N~-L~~lp~~~~~L~~L 349 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLIELPA---LPPRLERLIASFN-HLAEVPELPQNLKQLHVEYNP-LREFPDIPESVEDL 349 (353)
T ss_dssp CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSS-CCSCCCCCCTTCCEEECCSSC-CSSCCCCCTTCCEE
T ss_pred CCCCCEEECCCCccCcccc---ccCCCCEEECCCC-cCCccccccCCCCEEECcCCc-CCCCCccccccCee
Confidence 5678888888888887774 3678888888877 677888777788888888886 88877666555544
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=4.1e-17 Score=135.53 Aligned_cols=123 Identities=29% Similarity=0.400 Sum_probs=72.5
Q ss_pred hhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEE
Q 017590 131 IENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKL 210 (369)
Q Consensus 131 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L 210 (369)
+..+++|+.+.++++..... ..+...+.+..+.+..+.+... ..+..+++|++|++++|.....+. +.++++|+.|
T Consensus 103 l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~~~-l~~l~~L~~L 178 (227)
T d1h6ua2 103 IAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI-SPLAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTL 178 (227)
T ss_dssp GTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEE
T ss_pred cccccccccccccccccccc--chhccccchhhhhchhhhhchh-hhhccccccccccccccccccchh-hcccccceec
Confidence 33444555555544332211 1233444455555555544433 234556677777777766544333 5667777777
Q ss_pred eccCCCCccCCCCCCCCCCCCEEEcCCCCCCccchhhccCCCCCEeccc
Q 017590 211 ELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPTSISQLSRLRWLYLV 259 (369)
Q Consensus 211 ~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~ 259 (369)
++++|++.+++. ++.+++|++|++++|+++.++ .++.+++|+.|+++
T Consensus 179 ~Ls~n~l~~l~~-l~~l~~L~~L~Ls~N~lt~i~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 179 KADDNKISDISP-LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVTLT 225 (227)
T ss_dssp ECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG-GGTTCTTCCEEEEE
T ss_pred ccCCCccCCChh-hcCCCCCCEEECcCCcCCCCc-ccccCCCCCEEEee
Confidence 777777766543 566777777777777777766 36677777777775
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.71 E-value=2e-15 Score=133.46 Aligned_cols=256 Identities=20% Similarity=0.166 Sum_probs=157.1
Q ss_pred CCCCCCCCccCCCCcCCCCccEEecCCCCCccccCCccCCeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccccch
Q 017590 2 IMAGCESLRCFPQNIHFISSIKIDCYKCVNLREFPRISGNVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLST 81 (369)
Q Consensus 2 ~l~~c~~l~~~p~~~~~~~L~~L~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~ 81 (369)
++.++ +++++|.. .++|++|++++|. ++.+|+.+++|++|+++++.++.++.. .+.|++|++++|.. ..+|.
T Consensus 44 dLs~~-~L~~lp~~--~~~L~~L~Ls~N~-l~~lp~~~~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n~l-~~lp~ 115 (353)
T d1jl5a_ 44 ELNNL-GLSSLPEL--PPHLESLVASCNS-LTELPELPQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQL-EKLPE 115 (353)
T ss_dssp ECTTS-CCSCCCSC--CTTCSEEECCSSC-CSSCCCCCTTCCEEECCSSCCSCCCSC---CTTCCEEECCSSCC-SSCCC
T ss_pred EeCCC-CCCCCCCC--CCCCCEEECCCCC-Ccccccchhhhhhhhhhhcccchhhhh---cccccccccccccc-ccccc
Confidence 45555 47888863 5789999999987 899999888999999999998877642 24799999999754 46665
Q ss_pred hhccCCcCcEEecCCCcCcccCc------------------hhhhccCccceeccccccccccc----------------
Q 017590 82 SICKLKSLRSLDLSYCINLESFP------------------EILEKMELLEEINLEEASNIKEL---------------- 127 (369)
Q Consensus 82 ~~~~l~~L~~L~l~~~~~~~~~~------------------~~~~~l~~L~~L~l~~~~~~~~~---------------- 127 (369)
++.+++|++|+++++....... ..+..++.++.+++.++......
T Consensus 116 -~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~ 194 (353)
T d1jl5a_ 116 -LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNIL 194 (353)
T ss_dssp -CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCC
T ss_pred -hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccccccccccccccccccccc
Confidence 5779999999998865432211 11223344444444433211100
Q ss_pred --chhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCC-----------
Q 017590 128 --PSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRG----------- 194 (369)
Q Consensus 128 --~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~----------- 194 (369)
...+..++.++.++++++.. ...+. ...++..+.+..+.+...+.. ...+...++..+..
T Consensus 195 ~~~~~~~~l~~L~~l~l~~n~~-~~~~~---~~~~l~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~l~~l~~~~~ 267 (353)
T d1jl5a_ 195 EELPELQNLPFLTTIYADNNLL-KTLPD---LPPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGLSELPPNLY 267 (353)
T ss_dssp SSCCCCTTCTTCCEEECCSSCC-SSCCS---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEESCCCTTCC
T ss_pred cccccccccccccccccccccc-ccccc---ccccccccccccccccccccc---cccccccccccccccccccccchhc
Confidence 00112233334444433221 11111 111222222222222211111 11222222222211
Q ss_pred ------cCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCccchhhccCCCCCEeccccccccccCC
Q 017590 195 ------LVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPTSISQLSRLRWLYLVNCVKLQSLP 268 (369)
Q Consensus 195 ------~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~ 268 (369)
..+......+++|++|++++|.+..+|.. +++|+.|++++|+++.+|. .+++|++|++++|+ ++.+|
T Consensus 268 ~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~L~~l~~---~~~~L~~L~L~~N~-L~~lp 340 (353)
T d1jl5a_ 268 YLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLAEVPE---LPQNLKQLHVEYNP-LREFP 340 (353)
T ss_dssp EEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSC-CSSCC
T ss_pred ccccccCccccccccCCCCCEEECCCCccCccccc---cCCCCEEECCCCcCCcccc---ccCCCCEEECcCCc-CCCCC
Confidence 01112223457899999999999988753 6799999999999998885 35689999999995 99999
Q ss_pred CcCcccceeccc
Q 017590 269 ELPLLLVMLGAS 280 (369)
Q Consensus 269 ~~~~~L~~L~l~ 280 (369)
..+.+|+.|++.
T Consensus 341 ~~~~~L~~L~~~ 352 (353)
T d1jl5a_ 341 DIPESVEDLRMN 352 (353)
T ss_dssp CCCTTCCEEECC
T ss_pred ccccccCeeECc
Confidence 988899999874
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=2e-17 Score=137.42 Aligned_cols=207 Identities=20% Similarity=0.271 Sum_probs=156.1
Q ss_pred CCCccEEecCCCCCccccCCc--cCCeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecC
Q 017590 18 FISSIKIDCYKCVNLREFPRI--SGNVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLS 95 (369)
Q Consensus 18 ~~~L~~L~l~~~~~~~~~~~~--~~~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~ 95 (369)
+.++..++++.+. +.++... +.+|+.|++.+++++.++ .+..+++|++|++++|.... +.+ +..+++|++++++
T Consensus 18 l~~~~~~~l~~~~-~~d~~~~~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~-~~~-l~~l~~l~~l~~~ 93 (227)
T d1h6ua2 18 LANAIKIAAGKSN-VTDTVTQADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELS 93 (227)
T ss_dssp HHHHHHHHTTCSS-TTSEECHHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECC
T ss_pred HHHHHHHHhCCCC-cCCcCCHHHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCceeec-ccc-ccccccccccccc
Confidence 4444455665555 4443322 238999999999998885 47889999999999976543 333 7889999999999
Q ss_pred CCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCC
Q 017590 96 YCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAP 175 (369)
Q Consensus 96 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 175 (369)
+|... .++ .+..+++|++++++++.... . ..+...+.++.+.+..+..... ..+..+++|+.+++.++.+...+
T Consensus 94 ~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~ 167 (227)
T d1h6ua2 94 GNPLK-NVS-AIAGLQSIKTLDLTSTQITD-V-TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT 167 (227)
T ss_dssp SCCCS-CCG-GGTTCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG
T ss_pred ccccc-ccc-cccccccccccccccccccc-c-chhccccchhhhhchhhhhchh--hhhccccccccccccccccccch
Confidence 87543 443 46789999999998765433 2 2355678888998877654332 23677888999999999887654
Q ss_pred ccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCC
Q 017590 176 SSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSG 237 (369)
Q Consensus 176 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~ 237 (369)
.+.++++|++|++++|....++. +..+++|++|++++|++++++. +..+++|++|++++
T Consensus 168 -~l~~l~~L~~L~Ls~n~l~~l~~-l~~l~~L~~L~Ls~N~lt~i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 168 -PLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp -GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEE
T ss_pred -hhcccccceecccCCCccCCChh-hcCCCCCCEEECcCCcCCCCcc-cccCCCCCEEEeeC
Confidence 47889999999999998777765 7888999999999999988764 78899999999874
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.8e-17 Score=142.34 Aligned_cols=217 Identities=15% Similarity=0.140 Sum_probs=114.7
Q ss_pred cEEecCCCCCccccCC-ccC-CeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccc-cchhhccCCcCcEEecCCCc
Q 017590 22 IKIDCYKCVNLREFPR-ISG-NVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKR-LSTSICKLKSLRSLDLSYCI 98 (369)
Q Consensus 22 ~~L~l~~~~~~~~~~~-~~~-~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~l~~~~ 98 (369)
+.+|++++.....+.. ... .+..+.+....+...........+|++|++++|..... +...+.++++|++|++++|.
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~ 82 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR 82 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCB
T ss_pred CEEECCCCCCCchHHHHHHhccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccC
Confidence 4667776542211111 111 34444444333332222233445788888887655433 34456677888888888876
Q ss_pred CcccCchhhhccCccceecccccccccc--cchhhhcccCCCeEeecCCCCCCCC--Cccc-CCCcchhhhccCccc--C
Q 017590 99 NLESFPEILEKMELLEEINLEEASNIKE--LPSSIENLEGLKQLKLTGCTKLGSL--PESL-GNLKSLERLHAGLLA--I 171 (369)
Q Consensus 99 ~~~~~~~~~~~l~~L~~L~l~~~~~~~~--~~~~~~~~~~L~~L~l~~~~~~~~~--~~~~-~~l~~L~~L~l~~~~--~ 171 (369)
.....+..+..+++|++|++++|..+++ +...+.++++|++|++++|..+... ...+ ..+++|+.|++.++. +
T Consensus 83 l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i 162 (284)
T d2astb2 83 LSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNL 162 (284)
T ss_dssp CCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGS
T ss_pred CCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccc
Confidence 5555556667778888888887766653 2333456778888888777654321 1111 123455555555432 2
Q ss_pred C--CCCccccCCCCCcEEEeccCC-Cc-CCCcccCCCCCCcEEeccCCC-Ccc-CCCCCCCCCCCCEEEcCCC
Q 017590 172 P--QAPSSIVDLNKLETLSLFECR-GL-VLPPLLSGLSSLKKLELGDCE-IME-IPPDIGCLSSLESLNLSGN 238 (369)
Q Consensus 172 ~--~~~~~~~~~~~L~~L~l~~~~-~~-~~~~~~~~~~~L~~L~l~~~~-~~~-~~~~~~~~~~L~~L~l~~~ 238 (369)
+ .+......+++|++|++++|. .+ .....+..+++|++|++++|. +++ ....++.+++|++|++++|
T Consensus 163 ~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 163 QKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 1 111223345666666666654 11 222344555666666666653 332 2223445566666666665
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.8e-16 Score=130.91 Aligned_cols=213 Identities=20% Similarity=0.223 Sum_probs=113.6
Q ss_pred cEEecCCCCCccccCCccC-CeeEEEcCCccccccCc-ccCCCCCCCEEeCcCcccccccc-hhhccCCcCcEEecCCCc
Q 017590 22 IKIDCYKCVNLREFPRISG-NVVELNLMCTPIEEVPL-SIECLPNLETLEMSFCNSLKRLS-TSICKLKSLRSLDLSYCI 98 (369)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~-~L~~L~l~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~ 98 (369)
+.++.++.. ++.+|..+. ++++|+++++.++.++. .|..+++|++|++++|.....++ ..+.++++++++.+..++
T Consensus 11 ~~i~c~~~~-l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 11 RVFLCQESK-VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp SEEEEESCS-CSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred CEEEEeCCC-CCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 456666655 667765544 77777777777776665 46667777777777765554433 345666777777665433
Q ss_pred Cc-ccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCC-c
Q 017590 99 NL-ESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAP-S 176 (369)
Q Consensus 99 ~~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~ 176 (369)
.. ...+..+..+++|+++++.++... ..+. +..+.+++. +..+...++.+..++ .
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~-~~~~-~~~~~~l~~---------------------l~~~~~~n~~l~~i~~~ 146 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIK-HLPD-VHKIHSLQK---------------------VLLDIQDNINIHTIERN 146 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCC-SCCC-CTTTCBSSC---------------------EEEEEESCTTCCEECTT
T ss_pred cccccccccccccccccccccchhhhc-cccc-ccccccccc---------------------ccccccccccccccccc
Confidence 22 223344555666666666544322 1111 111222222 222222222222221 1
Q ss_pred cccC-CCCCcEEEeccCCCcCCCcccCCCCCCcEE-eccCCCCccCCCC-CCCCCCCCEEEcCCCCCCccchh-hccCCC
Q 017590 177 SIVD-LNKLETLSLFECRGLVLPPLLSGLSSLKKL-ELGDCEIMEIPPD-IGCLSSLESLNLSGNNIESLPTS-ISQLSR 252 (369)
Q Consensus 177 ~~~~-~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L-~l~~~~~~~~~~~-~~~~~~L~~L~l~~~~l~~~~~~-~~~~~~ 252 (369)
.+.. ...++.+++.++....++..+....+++++ .+.+|.+.+++.. +..+++|++|++++|+++.+|.. +..+++
T Consensus 147 ~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 226 (242)
T d1xwdc1 147 SFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 226 (242)
T ss_dssp SSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred ccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcc
Confidence 2222 235666677666655555444444454444 4566667666543 56677888888888777776642 344444
Q ss_pred CCEecc
Q 017590 253 LRWLYL 258 (369)
Q Consensus 253 L~~L~l 258 (369)
|+.+++
T Consensus 227 L~~l~~ 232 (242)
T d1xwdc1 227 LRARST 232 (242)
T ss_dssp EESSSE
T ss_pred cccCcC
Confidence 444443
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=1.3e-15 Score=123.62 Aligned_cols=161 Identities=23% Similarity=0.374 Sum_probs=89.6
Q ss_pred CCcCcEEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhc
Q 017590 86 LKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLH 165 (369)
Q Consensus 86 l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~ 165 (369)
+.++++|+++++... .+ ..+..+++|++|++++|. ++.++. +.++++|+.|++++|. ...++ .+..+++|+.++
T Consensus 39 l~~l~~L~l~~~~i~-~l-~~l~~l~nL~~L~Ls~N~-l~~~~~-l~~l~~L~~L~l~~n~-~~~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQ-LTDITP-LKNLTKLVDILMNNNQ-IADIT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSSC-CCCCG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCC-Cc-cccccCCCcCcCcccccc-ccCccc-ccCCcccccccccccc-ccccc-cccccccccccc
Confidence 455555555554322 22 234455555555555443 233322 4555556666655543 22222 245555566666
Q ss_pred cCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCccch
Q 017590 166 AGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPT 245 (369)
Q Consensus 166 l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~ 245 (369)
++++..... ..+..+++|+.|++++|....++ .+..+++++.|++.+|.+.+++. ++.+++|++|++++|++++++
T Consensus 113 l~~~~~~~~-~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~l~~l~~-l~~l~~L~~L~ls~N~i~~i~- 188 (199)
T d2omxa2 113 LFNNQITDI-DPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQVTDLKP-LANLTTLERLDISSNKVSDIS- 188 (199)
T ss_dssp CCSSCCCCC-GGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-
T ss_pred ccccccccc-cccchhhhhHHhhhhhhhhcccc-cccccccccccccccccccCCcc-ccCCCCCCEEECCCCCCCCCc-
Confidence 555554443 23555666777777766654443 35566677777777776666542 566677777777777776665
Q ss_pred hhccCCCCCEe
Q 017590 246 SISQLSRLRWL 256 (369)
Q Consensus 246 ~~~~~~~L~~L 256 (369)
.++.+++|++|
T Consensus 189 ~l~~L~~L~~L 199 (199)
T d2omxa2 189 VLAKLTNLESL 199 (199)
T ss_dssp GGGGCTTCSEE
T ss_pred cccCCCCCCcC
Confidence 35666666654
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64 E-value=1.2e-15 Score=124.81 Aligned_cols=165 Identities=27% Similarity=0.338 Sum_probs=96.8
Q ss_pred CCcCcEEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhc
Q 017590 86 LKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLH 165 (369)
Q Consensus 86 l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~ 165 (369)
+.+|++|++++|... .++ .+..+++|++|++++|. ++.++ .+..+++|+.|++++|. ++.++ .+..+++|+.++
T Consensus 45 L~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~L~~n~-i~~l~-~~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNK-LTDIK-PLANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSC-CCCCG-GGTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCC-Cch-hHhhCCCCCEEeCCCcc-ccCcc-ccccCcccccccccccc-ccccc-cccccccccccc
Confidence 344555555554322 222 24445555555555443 22222 23445555555555533 33333 345555666666
Q ss_pred cCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCccch
Q 017590 166 AGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIESLPT 245 (369)
Q Consensus 166 l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~ 245 (369)
+.++.+..+ ..+..+++++.++++++.....+ .+..+++|+.+++++|.+.+++. +..+++|++|++++|.++.++
T Consensus 119 l~~~~~~~~-~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N~i~~l~- 194 (210)
T d1h6ta2 119 LEHNGISDI-NGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR- 194 (210)
T ss_dssp CTTSCCCCC-GGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-
T ss_pred ccccccccc-ccccccccccccccccccccccc-ccccccccccccccccccccccc-ccCCCCCCEEECCCCCCCCCh-
Confidence 666655544 24556677777777777654433 35567778888888887776543 667788888888888887776
Q ss_pred hhccCCCCCEecccc
Q 017590 246 SISQLSRLRWLYLVN 260 (369)
Q Consensus 246 ~~~~~~~L~~L~l~~ 260 (369)
.+..+++|++|++++
T Consensus 195 ~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 195 ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGTTCTTCSEEEEEE
T ss_pred hhcCCCCCCEEEccC
Confidence 477788888888763
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=9.6e-16 Score=128.43 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=117.2
Q ss_pred CCccCCCCcCCCCccEEecCCCCCccccCCc-cC---CeeEEEcCCccccc-cCc-ccCCCCCCCEEeCcCccccc-ccc
Q 017590 8 SLRCFPQNIHFISSIKIDCYKCVNLREFPRI-SG---NVVELNLMCTPIEE-VPL-SIECLPNLETLEMSFCNSLK-RLS 80 (369)
Q Consensus 8 ~l~~~p~~~~~~~L~~L~l~~~~~~~~~~~~-~~---~L~~L~l~~~~~~~-l~~-~~~~l~~L~~L~l~~~~~~~-~~~ 80 (369)
+++++|..+ .+++++|++++|. ++.++.. +. +|++|+++++.+.. ++. .+..+++++++.+..+.... ..+
T Consensus 19 ~l~~iP~~l-~~~l~~L~Ls~n~-i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~ 96 (242)
T d1xwdc1 19 KVTEIPSDL-PRNAIELRFVLTK-LRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINP 96 (242)
T ss_dssp SCSSCCSCS-CSCCSEEEEESCC-CCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECT
T ss_pred CCCCcCCCC-CCCCCEEECcCCc-CCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccc
Confidence 678898766 4689999999998 8888752 33 99999998888764 443 57789999999987655444 445
Q ss_pred hhhccCCcCcEEecCCCcCcccCc-hhhhccCccceeccccccccccc-chhhhccc-CCCeEeecCCCCCCCCCcccCC
Q 017590 81 TSICKLKSLRSLDLSYCINLESFP-EILEKMELLEEINLEEASNIKEL-PSSIENLE-GLKQLKLTGCTKLGSLPESLGN 157 (369)
Q Consensus 81 ~~~~~l~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~ 157 (369)
..+.++++|++++++++......+ ..+..+..+..+... +..+..+ +..+.+++ .++.+++
T Consensus 97 ~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~-n~~l~~i~~~~~~~~~~~l~~L~l--------------- 160 (242)
T d1xwdc1 97 EAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD-NINIHTIERNSFVGLSFESVILWL--------------- 160 (242)
T ss_dssp TSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEES-CTTCCEECTTSSTTSBSSCEEEEC---------------
T ss_pred ccccccccccccccchhhhccccccccccccccccccccc-ccccccccccccccccccceeeec---------------
Confidence 667889999999999975443222 223334444443333 2222222 22222222 3444444
Q ss_pred CcchhhhccCcccCCCCCccccCCCCCcEEE-eccCCCcCCCc-ccCCCCCCcEEeccCCCCccCCCC-CCCCCCCCEEE
Q 017590 158 LKSLERLHAGLLAIPQAPSSIVDLNKLETLS-LFECRGLVLPP-LLSGLSSLKKLELGDCEIMEIPPD-IGCLSSLESLN 234 (369)
Q Consensus 158 l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~-l~~~~~~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~L~~L~ 234 (369)
.++.+..++.......+++++. +.++....+|. .+.++++|++|++++|++.+++.. +..++.|+.++
T Consensus 161 ---------~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~ 231 (242)
T d1xwdc1 161 ---------NKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 231 (242)
T ss_dssp ---------CSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSS
T ss_pred ---------ccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCc
Confidence 4444443333333334444443 33444555543 355666677777777666665442 33344444333
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=7.1e-15 Score=119.09 Aligned_cols=161 Identities=22% Similarity=0.338 Sum_probs=87.3
Q ss_pred CCCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEe
Q 017590 62 LPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLK 141 (369)
Q Consensus 62 l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 141 (369)
++++++|++++|... .+. .+..+++|++|++++|.. +.++. +..+++|++|++++|.. ..++ .+.+++.|+.++
T Consensus 39 l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l-~~~~~-l~~l~~L~~L~l~~n~~-~~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQL-TDITP-LKNLTKLVDILMNNNQI-ADIT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCC-CCCGG-GTTCTTCCEEECCSSCC-CCCG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccc-cCccc-ccCCccccccccccccc-cccc-cccccccccccc
Confidence 344555555554322 222 244455555555555432 22222 44555555555554332 2222 244555666666
Q ss_pred ecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCC
Q 017590 142 LTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIP 221 (369)
Q Consensus 142 l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 221 (369)
++++.... . ..+..+++|+.+++++|.+..++ .+..+++|+.|++.+|....++. ++++++|++|++++|++++++
T Consensus 113 l~~~~~~~-~-~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~l~~l~~-l~~l~~L~~L~ls~N~i~~i~ 188 (199)
T d2omxa2 113 LFNNQITD-I-DPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQVTDLKP-LANLTTLERLDISSNKVSDIS 188 (199)
T ss_dssp CCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG
T ss_pred cccccccc-c-cccchhhhhHHhhhhhhhhcccc-cccccccccccccccccccCCcc-ccCCCCCCEEECCCCCCCCCc
Confidence 65543322 1 23555666666666666665543 45666777777777776655543 567777777777777777654
Q ss_pred CCCCCCCCCCEE
Q 017590 222 PDIGCLSSLESL 233 (369)
Q Consensus 222 ~~~~~~~~L~~L 233 (369)
.++.+++|++|
T Consensus 189 -~l~~L~~L~~L 199 (199)
T d2omxa2 189 -VLAKLTNLESL 199 (199)
T ss_dssp -GGGGCTTCSEE
T ss_pred -cccCCCCCCcC
Confidence 35666677654
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.58 E-value=1.8e-14 Score=117.75 Aligned_cols=164 Identities=26% Similarity=0.308 Sum_probs=88.6
Q ss_pred CCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCcccCchhhhccCccceecccccccccccchhhhcccCCCeEee
Q 017590 63 PNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKL 142 (369)
Q Consensus 63 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 142 (369)
.+|+.|++++|... .++. +..+++|++|++++|... .++ .+..+++|++|++++|. ++.++ .+..+++|+.+++
T Consensus 46 ~~L~~L~l~~~~i~-~l~~-l~~l~~L~~L~L~~n~i~-~l~-~~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 46 NSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLT-DIK-PLANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCG-GGTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEEC
T ss_pred cCccEEECcCCCCC-Cchh-HhhCCCCCEEeCCCcccc-Ccc-ccccCcccccccccccc-ccccc-ccccccccccccc
Confidence 34455555544322 2221 444555555555554322 222 23445555555555432 23332 2445555555555
Q ss_pred cCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCC
Q 017590 143 TGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPP 222 (369)
Q Consensus 143 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 222 (369)
.+|.. ..+ ..+..+++++.+++.++.+... ..+..+++|+.+++++|....++. +.++++|++|++++|.+.+++
T Consensus 120 ~~~~~-~~~-~~l~~l~~l~~l~~~~n~l~~~-~~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N~i~~l~- 194 (210)
T d1h6ta2 120 EHNGI-SDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR- 194 (210)
T ss_dssp TTSCC-CCC-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-
T ss_pred ccccc-ccc-cccccccccccccccccccccc-cccccccccccccccccccccccc-ccCCCCCCEEECCCCCCCCCh-
Confidence 55432 222 2345555666666666655543 234556777777777777655543 666777777888777777665
Q ss_pred CCCCCCCCCEEEcCC
Q 017590 223 DIGCLSSLESLNLSG 237 (369)
Q Consensus 223 ~~~~~~~L~~L~l~~ 237 (369)
.+..+++|++|++++
T Consensus 195 ~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 195 ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGTTCTTCSEEEEEE
T ss_pred hhcCCCCCCEEEccC
Confidence 367777888877753
No 22
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.9e-15 Score=128.39 Aligned_cols=175 Identities=22% Similarity=0.267 Sum_probs=127.6
Q ss_pred CeeEEEcCCcccc--ccCcccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCccc--CchhhhccCcccee
Q 017590 41 NVVELNLMCTPIE--EVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINLES--FPEILEKMELLEEI 116 (369)
Q Consensus 41 ~L~~L~l~~~~~~--~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~--~~~~~~~l~~L~~L 116 (369)
+|++|+++++.+. .+...+..+++|++|++++|......+..+.++++|++|++++|...+. +...+..+++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 8999999887775 3555678889999999999876666667788889999999999876653 33445778999999
Q ss_pred cccccccccc--cchhhh-cccCCCeEeecCCCC-CCC--CCcccCCCcchhhhccCccc-CC-CCCccccCCCCCcEEE
Q 017590 117 NLEEASNIKE--LPSSIE-NLEGLKQLKLTGCTK-LGS--LPESLGNLKSLERLHAGLLA-IP-QAPSSIVDLNKLETLS 188 (369)
Q Consensus 117 ~l~~~~~~~~--~~~~~~-~~~~L~~L~l~~~~~-~~~--~~~~~~~l~~L~~L~l~~~~-~~-~~~~~~~~~~~L~~L~ 188 (369)
++++|..+++ +...+. .+++|+.|++++|.. ++. +...+..+++|++|++++|. ++ .....+..+++|++|+
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~ 206 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLS 206 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred ccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEE
Confidence 9998766542 222233 357899999987632 222 22234568889999998865 44 3445677889999999
Q ss_pred eccCCC--cCCCcccCCCCCCcEEeccCC
Q 017590 189 LFECRG--LVLPPLLSGLSSLKKLELGDC 215 (369)
Q Consensus 189 l~~~~~--~~~~~~~~~~~~L~~L~l~~~ 215 (369)
+++|.. ......+..+++|+.|++.+|
T Consensus 207 L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 207 LSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 999862 222335677899999999988
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.47 E-value=1.2e-13 Score=111.01 Aligned_cols=127 Identities=21% Similarity=0.197 Sum_probs=101.6
Q ss_pred ccEEecCCCCCccccCCccC-CeeEEEcCCccccc-cC-cccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCC
Q 017590 21 SIKIDCYKCVNLREFPRISG-NVVELNLMCTPIEE-VP-LSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYC 97 (369)
Q Consensus 21 L~~L~l~~~~~~~~~~~~~~-~L~~L~l~~~~~~~-l~-~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 97 (369)
.+.++.+++. ++.+|..++ ++++|++++|.++. ++ ..|..+++|+.|++++|......+..+..+++|++|++++|
T Consensus 10 ~~~v~Cs~~~-L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 10 GTTVDCTGRG-LKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TTEEECTTSC-CSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCEEEEeCCC-cCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 3578888877 888887665 89999999999874 43 35788899999999998777777778888999999999998
Q ss_pred cCcccCchhhhccCccceecccccccccccchhhhcccCCCeEeecCCCCC
Q 017590 98 INLESFPEILEKMELLEEINLEEASNIKELPSSIENLEGLKQLKLTGCTKL 148 (369)
Q Consensus 98 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 148 (369)
......+..|.++++|++|++++|...+..+.+|..+++|++++++++...
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 666556677889999999999977665555667888899999999886543
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.43 E-value=4.3e-13 Score=99.27 Aligned_cols=97 Identities=24% Similarity=0.281 Sum_probs=62.9
Q ss_pred hhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCCCCCCEEEcCCCCCCc
Q 017590 163 RLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCLSSLESLNLSGNNIES 242 (369)
Q Consensus 163 ~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~ 242 (369)
.|++++|.++.++ .+..+++|++|++++|....+|..+..+++|+.|++++|.+.+++. +..+++|++|++++|.++.
T Consensus 2 ~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l~~L~~L~l~~N~i~~ 79 (124)
T d1dcea3 2 VLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG-VANLPRLQELLLCNNRLQQ 79 (124)
T ss_dssp EEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCCS
T ss_pred EEEcCCCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCc-cccccccCeEECCCCccCC
Confidence 4556666666554 3566666777777776666666656666677777777776666543 5666677777777776665
Q ss_pred cc--hhhccCCCCCEeccccc
Q 017590 243 LP--TSISQLSRLRWLYLVNC 261 (369)
Q Consensus 243 ~~--~~~~~~~~L~~L~l~~~ 261 (369)
++ ..+..+++|++|++++|
T Consensus 80 ~~~~~~l~~~~~L~~L~l~~N 100 (124)
T d1dcea3 80 SAAIQPLVSCPRLVLLNLQGN 100 (124)
T ss_dssp SSTTGGGGGCTTCCEEECTTS
T ss_pred CCCchhhcCCCCCCEEECCCC
Confidence 54 34566677777777766
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.41 E-value=1.3e-13 Score=110.88 Aligned_cols=128 Identities=19% Similarity=0.145 Sum_probs=82.6
Q ss_pred eEEEcCCccccccCcccCCCCCCCEEeCcCccccccc-chhhccCCcCcEEecCCCcCcccCchhhhccCccceeccccc
Q 017590 43 VELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRL-STSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEA 121 (369)
Q Consensus 43 ~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 121 (369)
++++.++++++.+|..+. +++++|++++|.....+ +..|.++++|++|++++|......+..+..+++|++|++++|
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 456777777888876542 57888888887665433 345677888888888877666666677777777777777766
Q ss_pred ccccccchhhhcccCCCeEeecCCCCCCCCCcccCCCcchhhhccCcccCC
Q 017590 122 SNIKELPSSIENLEGLKQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIP 172 (369)
Q Consensus 122 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 172 (369)
+.....+.+|.++++|++|++++|......+..+..+++|+++++++|.+.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 544444445666677777777665433333334455555555555555543
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=6.4e-13 Score=103.30 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=88.1
Q ss_pred CCCCcCCCCccEEecCCCCCccccCCccC---CeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccccchhhccCCc
Q 017590 12 FPQNIHFISSIKIDCYKCVNLREFPRISG---NVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKS 88 (369)
Q Consensus 12 ~p~~~~~~~L~~L~l~~~~~~~~~~~~~~---~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~ 88 (369)
.|...++..+++|++++|. +..++.... +|+.|++++|.++.++. +..+++|++|++++|......+..+..+++
T Consensus 11 ~~~~~n~~~lr~L~L~~n~-I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~-~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 11 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIRKLDG-FPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp SCEEECTTSCEEEECTTSC-CCSCCCGGGGTTCCSEEECCSSCCCEECC-CCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hHhccCcCcCcEEECCCCC-CCccCccccccccCCEEECCCCCCCccCC-cccCcchhhhhcccccccCCCccccccccc
Confidence 4444567778888888887 777765433 88888888888887753 777888888888887654433344566888
Q ss_pred CcEEecCCCcCcccCc--hhhhccCccceeccccccccccc---chhhhcccCCCeEee
Q 017590 89 LRSLDLSYCINLESFP--EILEKMELLEEINLEEASNIKEL---PSSIENLEGLKQLKL 142 (369)
Q Consensus 89 L~~L~l~~~~~~~~~~--~~~~~l~~L~~L~l~~~~~~~~~---~~~~~~~~~L~~L~l 142 (369)
|++|++++|.... ++ ..+..+++|++|++++|...... +..+..+++|+.|+-
T Consensus 89 L~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 89 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred cccceeccccccc-cccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 8888888875433 32 35677888888888877543211 124566777777763
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.38 E-value=9.9e-13 Score=97.28 Aligned_cols=116 Identities=20% Similarity=0.187 Sum_probs=86.8
Q ss_pred CeEeecCCCCCCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCC
Q 017590 138 KQLKLTGCTKLGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEI 217 (369)
Q Consensus 138 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 217 (369)
|.|+++++. ++.++ .++.+++|++|++++|.++.+|+.+..+++|+.|++++|....++. +..+++|+.|++++|++
T Consensus 1 R~L~Ls~n~-l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKD-LTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG-VANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSC-CSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCC-CCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCc-cccccccCeEECCCCcc
Confidence 456777743 44554 3677788888888888888887778888888888888888777764 77888899999999988
Q ss_pred ccCCC--CCCCCCCCCEEEcCCCCCCccc---h-hhccCCCCCEe
Q 017590 218 MEIPP--DIGCLSSLESLNLSGNNIESLP---T-SISQLSRLRWL 256 (369)
Q Consensus 218 ~~~~~--~~~~~~~L~~L~l~~~~l~~~~---~-~~~~~~~L~~L 256 (369)
..++. .+..+++|++|++++|.++..+ . ....+|+|+.+
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 87653 4677889999999998876433 2 23557777665
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=2.3e-13 Score=105.89 Aligned_cols=104 Identities=20% Similarity=0.216 Sum_probs=63.5
Q ss_pred CCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCC-CCCCCCCCEEEc
Q 017590 157 NLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPD-IGCLSSLESLNL 235 (369)
Q Consensus 157 ~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~L~~L~l 235 (369)
++.++++|++++|.++.++..+..+++|+.|++++|....++ .+..+++|++|++++|.+..++.. +..+++|++|++
T Consensus 16 n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp CTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 444555666666666655544455666666666666655553 255666666777777666665443 244666777777
Q ss_pred CCCCCCccch--hhccCCCCCEeccccc
Q 017590 236 SGNNIESLPT--SISQLSRLRWLYLVNC 261 (369)
Q Consensus 236 ~~~~l~~~~~--~~~~~~~L~~L~l~~~ 261 (369)
++|.++.+++ .+..+++|++|++++|
T Consensus 95 ~~N~i~~~~~l~~l~~l~~L~~L~l~~N 122 (162)
T d1a9na_ 95 TNNSLVELGDLDPLASLKSLTYLCILRN 122 (162)
T ss_dssp CSCCCCCGGGGGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccccccccchhhcCCC
Confidence 7776665542 4556667777777766
No 29
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.32 E-value=1.6e-13 Score=120.80 Aligned_cols=221 Identities=20% Similarity=0.172 Sum_probs=113.7
Q ss_pred CeeEEEcCCcccc-----ccCcccCCCCCCCEEeCcCccccc----------ccchhhccCCcCcEEecCCCcCccc---
Q 017590 41 NVVELNLMCTPIE-----EVPLSIECLPNLETLEMSFCNSLK----------RLSTSICKLKSLRSLDLSYCINLES--- 102 (369)
Q Consensus 41 ~L~~L~l~~~~~~-----~l~~~~~~l~~L~~L~l~~~~~~~----------~~~~~~~~l~~L~~L~l~~~~~~~~--- 102 (369)
.++.|+++++.+. .+...+...++|+.++++++.... .+...+..+++|++|++++|.....
T Consensus 32 ~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 111 (344)
T d2ca6a1 32 SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQE 111 (344)
T ss_dssp CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHH
T ss_pred CCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccccc
Confidence 5666666666553 233345566677777776543211 1223344566777777777644332
Q ss_pred -CchhhhccCccceecccccccccc----cch---------hhhcccCCCeEeecCCCCCCC----CCcccCCCcchhhh
Q 017590 103 -FPEILEKMELLEEINLEEASNIKE----LPS---------SIENLEGLKQLKLTGCTKLGS----LPESLGNLKSLERL 164 (369)
Q Consensus 103 -~~~~~~~l~~L~~L~l~~~~~~~~----~~~---------~~~~~~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L 164 (369)
+...+..+++|++|++++|..... +.. .....+.|+.+.++++..... +...+...+.++.+
T Consensus 112 ~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L 191 (344)
T d2ca6a1 112 PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTV 191 (344)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEE
T ss_pred chhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhccc
Confidence 233445566777777775542111 000 112345666776666432211 11123344556666
Q ss_pred ccCcccCCC------CCccccCCCCCcEEEeccCCCc-----CCCcccCCCCCCcEEeccCCCCcc-----CCCCC--CC
Q 017590 165 HAGLLAIPQ------APSSIVDLNKLETLSLFECRGL-----VLPPLLSGLSSLKKLELGDCEIME-----IPPDI--GC 226 (369)
Q Consensus 165 ~l~~~~~~~------~~~~~~~~~~L~~L~l~~~~~~-----~~~~~~~~~~~L~~L~l~~~~~~~-----~~~~~--~~ 226 (369)
++.+|.+.. +...+..+++|+.|++++|..+ .+...+..+++|++|++++|.+.+ +...+ ..
T Consensus 192 ~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~ 271 (344)
T d2ca6a1 192 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLE 271 (344)
T ss_dssp ECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCS
T ss_pred ccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhcc
Confidence 666665541 1223445666777777666532 122345556667777777776654 11111 12
Q ss_pred CCCCCEEEcCCCCCCc-----cchhh-ccCCCCCEeccccc
Q 017590 227 LSSLESLNLSGNNIES-----LPTSI-SQLSRLRWLYLVNC 261 (369)
Q Consensus 227 ~~~L~~L~l~~~~l~~-----~~~~~-~~~~~L~~L~l~~~ 261 (369)
.+.|++|++++|.++. +...+ ..+++|++|++++|
T Consensus 272 ~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 272 NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 312 (344)
T ss_dssp SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred CCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCC
Confidence 3456777777766651 22223 24566666766665
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.4e-13 Score=124.04 Aligned_cols=81 Identities=21% Similarity=0.301 Sum_probs=47.0
Q ss_pred CCCCccEEecCCCCCccc-----cCC---ccCCeeEEEcCCccccc-----cCcccC-CCCCCCEEeCcCcccccc----
Q 017590 17 HFISSIKIDCYKCVNLRE-----FPR---ISGNVVELNLMCTPIEE-----VPLSIE-CLPNLETLEMSFCNSLKR---- 78 (369)
Q Consensus 17 ~~~~L~~L~l~~~~~~~~-----~~~---~~~~L~~L~l~~~~~~~-----l~~~~~-~l~~L~~L~l~~~~~~~~---- 78 (369)
.+++++.|++++|. ++. ++. ..++|++|++++|.++. +...+. ...+|++|++++|.....
T Consensus 25 ~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~ 103 (460)
T d1z7xw1 25 LLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 103 (460)
T ss_dssp HHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCcccccccc
Confidence 46677777777776 432 222 22367777777777642 222222 234677777777764332
Q ss_pred cchhhccCCcCcEEecCCCc
Q 017590 79 LSTSICKLKSLRSLDLSYCI 98 (369)
Q Consensus 79 ~~~~~~~l~~L~~L~l~~~~ 98 (369)
++..+..+++|++|++++|.
T Consensus 104 l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 104 LSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp HHHHTTSCTTCCEEECCSSB
T ss_pred ccchhhcccccccccccccc
Confidence 33445667777777777764
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.21 E-value=6.2e-13 Score=117.03 Aligned_cols=228 Identities=17% Similarity=0.083 Sum_probs=149.9
Q ss_pred ccCcccCCCCCCCEEeCcCccccc----ccchhhccCCcCcEEecCCCcCccc----------CchhhhccCccceeccc
Q 017590 54 EVPLSIECLPNLETLEMSFCNSLK----RLSTSICKLKSLRSLDLSYCINLES----------FPEILEKMELLEEINLE 119 (369)
Q Consensus 54 ~l~~~~~~l~~L~~L~l~~~~~~~----~~~~~~~~l~~L~~L~l~~~~~~~~----------~~~~~~~l~~L~~L~l~ 119 (369)
.+...+.....|+.|++++|.... .+...+...++|+.|+++++..... +...+..+++|++|+++
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 444456678899999999986543 2334566789999999987643211 22345678899999999
Q ss_pred cccccc----ccchhhhcccCCCeEeecCCCCCCC----CCc---------ccCCCcchhhhccCcccCCC-----CCcc
Q 017590 120 EASNIK----ELPSSIENLEGLKQLKLTGCTKLGS----LPE---------SLGNLKSLERLHAGLLAIPQ-----APSS 177 (369)
Q Consensus 120 ~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~~----~~~---------~~~~l~~L~~L~l~~~~~~~-----~~~~ 177 (369)
+|.... .+...+...++|++|++++|..... +.. .....+.|+.+.++++.+.. +...
T Consensus 102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~ 181 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181 (344)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred ccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccch
Confidence 876433 2344566788999999998753211 000 11345567778887776652 2233
Q ss_pred ccCCCCCcEEEeccCCCcC------CCcccCCCCCCcEEeccCCCCcc-----CCCCCCCCCCCCEEEcCCCCCCc----
Q 017590 178 IVDLNKLETLSLFECRGLV------LPPLLSGLSSLKKLELGDCEIME-----IPPDIGCLSSLESLNLSGNNIES---- 242 (369)
Q Consensus 178 ~~~~~~L~~L~l~~~~~~~------~~~~~~~~~~L~~L~l~~~~~~~-----~~~~~~~~~~L~~L~l~~~~l~~---- 242 (369)
+..++.|++|++++|.... +...+..+++|+.|++++|.+.. +...+..+++|++|++++|.++.
T Consensus 182 l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~ 261 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261 (344)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred hhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhH
Confidence 4567889999998887432 22346677889999999988754 33345678889999999998872
Q ss_pred -cchhhc--cCCCCCEecccccccccc-----CCC----cCcccceecccCC
Q 017590 243 -LPTSIS--QLSRLRWLYLVNCVKLQS-----LPE----LPLLLVMLGASDC 282 (369)
Q Consensus 243 -~~~~~~--~~~~L~~L~l~~~~~l~~-----~~~----~~~~L~~L~l~~c 282 (369)
+-..+. ..+.|++|++++|. ++. +.. ..++|++|++.++
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGN 312 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCC
Confidence 222332 34678999999884 432 111 2356788887664
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.14 E-value=8.8e-14 Score=112.13 Aligned_cols=113 Identities=22% Similarity=0.232 Sum_probs=77.0
Q ss_pred CCCCCcccCCCcchhhhccCcccCCCCCccccCCCCCcEEEeccCCCcCCCcccCCCCCCcEEeccCCCCccCCCCCCCC
Q 017590 148 LGSLPESLGNLKSLERLHAGLLAIPQAPSSIVDLNKLETLSLFECRGLVLPPLLSGLSSLKKLELGDCEIMEIPPDIGCL 227 (369)
Q Consensus 148 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 227 (369)
+..++..+..+++|++|++++|.++.++ .+..+++|+.|++++|....++.....+++|+.|++++|.+..++ .+..+
T Consensus 37 i~~l~~sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l 114 (198)
T d1m9la_ 37 IEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKL 114 (198)
T ss_dssp CCCCHHHHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHH
T ss_pred hhhhhhHHhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccccccccc-ccccc
Confidence 3444445566667777777777776663 466677777777777776666654444556777777777777653 25566
Q ss_pred CCCCEEEcCCCCCCccc--hhhccCCCCCEecccccc
Q 017590 228 SSLESLNLSGNNIESLP--TSISQLSRLRWLYLVNCV 262 (369)
Q Consensus 228 ~~L~~L~l~~~~l~~~~--~~~~~~~~L~~L~l~~~~ 262 (369)
++|++|++++|.++.++ ..+..+++|+.|++++|+
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred ccccccccccchhccccccccccCCCccceeecCCCc
Confidence 77888888888877665 356778888888888875
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2e-12 Score=117.84 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=73.9
Q ss_pred CccEEecCCCCCccc-----cCCccCCeeEEEcCCcccc-----ccCcccCCCCCCCEEeCcCcccccc----cchhhc-
Q 017590 20 SSIKIDCYKCVNLRE-----FPRISGNVVELNLMCTPIE-----EVPLSIECLPNLETLEMSFCNSLKR----LSTSIC- 84 (369)
Q Consensus 20 ~L~~L~l~~~~~~~~-----~~~~~~~L~~L~l~~~~~~-----~l~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~- 84 (369)
+|+.|+++++. +.. +.....++++|++++++++ .+...+..+++|+.|++++|..... +...+.
T Consensus 3 ~l~~ld~~~~~-i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEE-LSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCC-CCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCc-CChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 68999999887 544 2234449999999888876 3344567899999999999865432 222222
Q ss_pred cCCcCcEEecCCCcCccc----CchhhhccCccceeccccccc
Q 017590 85 KLKSLRSLDLSYCINLES----FPEILEKMELLEEINLEEASN 123 (369)
Q Consensus 85 ~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~~ 123 (369)
...+|++|++++|..... ++..+..+++|++|++++|..
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence 235899999999875433 345677899999999997753
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.06 E-value=2.1e-12 Score=103.88 Aligned_cols=101 Identities=22% Similarity=0.251 Sum_probs=62.7
Q ss_pred CeeEEEcCCccccccCcccCCCCCCCEEeCcCcccccccchhhccCCcCcEEecCCCcCcccCchhhhccCccceecccc
Q 017590 41 NVVELNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLSTSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEE 120 (369)
Q Consensus 41 ~L~~L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 120 (369)
+|++|+++++.++.++ .+..+++|++|++++|.. ..++.....+++|++|++++|... .+ ..+..+++|++|++++
T Consensus 49 ~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i-~~i~~~~~~~~~L~~L~l~~N~i~-~l-~~~~~l~~L~~L~L~~ 124 (198)
T d1m9la_ 49 ACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLI-KKIENLDAVADTLEELWISYNQIA-SL-SGIEKLVNLRVLYMSN 124 (198)
T ss_dssp TCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEE-CSCSSHHHHHHHCCEEECSEEECC-CH-HHHHHHHHSSEEEESE
T ss_pred ccceeECcccCCCCcc-cccCCccccChhhccccc-cccccccccccccccccccccccc-cc-cccccccccccccccc
Confidence 6777777777777665 366677777777777543 344444444566777777775433 33 3456677777777775
Q ss_pred cccccccc--hhhhcccCCCeEeecCCC
Q 017590 121 ASNIKELP--SSIENLEGLKQLKLTGCT 146 (369)
Q Consensus 121 ~~~~~~~~--~~~~~~~~L~~L~l~~~~ 146 (369)
|.. +.++ ..+..+++|+.|++++|+
T Consensus 125 N~i-~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 125 NKI-TNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EEC-CCHHHHHHHTTTTTCSEEEECSSH
T ss_pred chh-ccccccccccCCCccceeecCCCc
Confidence 543 3222 346667777777777754
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=8.7e-10 Score=84.59 Aligned_cols=102 Identities=22% Similarity=0.119 Sum_probs=68.7
Q ss_pred hhhhccCcccCCCCCccccCCCCCcEEEeccCC-CcCCC-cccCCCCCCcEEeccCCCCccCC-CCCCCCCCCCEEEcCC
Q 017590 161 LERLHAGLLAIPQAPSSIVDLNKLETLSLFECR-GLVLP-PLLSGLSSLKKLELGDCEIMEIP-PDIGCLSSLESLNLSG 237 (369)
Q Consensus 161 L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~-~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~L~~L~l~~ 237 (369)
.+.+++.++.+...|..+..+++|++|++.++. ...++ ..|.++++|+.|++++|++..++ ..+..+++|++|+|++
T Consensus 10 ~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 344556666666666666667777777776554 55554 35667777777777777777753 4466777777777777
Q ss_pred CCCCccchhhccCCCCCEecccccc
Q 017590 238 NNIESLPTSISQLSRLRWLYLVNCV 262 (369)
Q Consensus 238 ~~l~~~~~~~~~~~~L~~L~l~~~~ 262 (369)
|+++.++.......+|++|++++|+
T Consensus 90 N~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 90 NALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred CCCcccChhhhccccccccccCCCc
Confidence 7777777655555567777777764
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.3e-08 Score=77.84 Aligned_cols=101 Identities=19% Similarity=0.119 Sum_probs=47.5
Q ss_pred EEcCCccccccCcccCCCCCCCEEeCcCcccccccc-hhhccCCcCcEEecCCCcCcccCchhhhccCccceeccccccc
Q 017590 45 LNLMCTPIEEVPLSIECLPNLETLEMSFCNSLKRLS-TSICKLKSLRSLDLSYCINLESFPEILEKMELLEEINLEEASN 123 (369)
Q Consensus 45 L~l~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 123 (369)
++.+.+.+...|..+..+++|++|++.+++..+.++ ..|.++++|+.|++++|......+..|..+++|++|++++|+.
T Consensus 13 l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l 92 (156)
T d2ifga3 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (156)
T ss_dssp EECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred EEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCC
Confidence 344444444444444555555555555444333332 3355555555555555443333344455555555555554432
Q ss_pred ccccchhhhcccCCCeEeecCCC
Q 017590 124 IKELPSSIENLEGLKQLKLTGCT 146 (369)
Q Consensus 124 ~~~~~~~~~~~~~L~~L~l~~~~ 146 (369)
+.++.......+|+.|++++|.
T Consensus 93 -~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 93 -ESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp -SCCCSTTTCSCCCCEEECCSSC
T ss_pred -cccChhhhccccccccccCCCc
Confidence 2333222223345555555543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97 E-value=5.5e-07 Score=68.98 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=16.1
Q ss_pred cCCcCcEEecCCCcCccc--CchhhhccCccceeccccc
Q 017590 85 KLKSLRSLDLSYCINLES--FPEILEKMELLEEINLEEA 121 (369)
Q Consensus 85 ~l~~L~~L~l~~~~~~~~--~~~~~~~l~~L~~L~l~~~ 121 (369)
.+++|++|++++|..... ++..+..+++|++|++++|
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N 101 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN 101 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC
Confidence 344555555555433221 1233444555555555543
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.85 E-value=1.5e-07 Score=72.18 Aligned_cols=59 Identities=24% Similarity=0.278 Sum_probs=26.5
Q ss_pred CCCCcEEeccCCCCccCC---CCCCCCCCCCEEEcCCCCCCccch-hhccCCCCCEecccccc
Q 017590 204 LSSLKKLELGDCEIMEIP---PDIGCLSSLESLNLSGNNIESLPT-SISQLSRLRWLYLVNCV 262 (369)
Q Consensus 204 ~~~L~~L~l~~~~~~~~~---~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~ 262 (369)
+++|++|++++|+++.+. ..+..+++|+.|++++|.++++++ ......+|+++++++|+
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCC
Confidence 344444444444444321 112334555555555555554442 11223345555555553
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.69 E-value=1.7e-05 Score=60.66 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=43.7
Q ss_pred ccCCCCCCCEEeCcCccccc----ccchhhccCCcCcEEecCCCcCccc----CchhhhccCccceecccccccc--c--
Q 017590 58 SIECLPNLETLEMSFCNSLK----RLSTSICKLKSLRSLDLSYCINLES----FPEILEKMELLEEINLEEASNI--K-- 125 (369)
Q Consensus 58 ~~~~l~~L~~L~l~~~~~~~----~~~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~~~--~-- 125 (369)
.+...+.|++|++++|.... .+...+...+.|++|++++|..... +...+...+.|++|+++++... +
T Consensus 39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~ 118 (167)
T d1pgva_ 39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 118 (167)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHH
Confidence 34455566666666654432 2223344456666666666544322 2234455556666666644211 1
Q ss_pred ---ccchhhhcccCCCeEeecC
Q 017590 126 ---ELPSSIENLEGLKQLKLTG 144 (369)
Q Consensus 126 ---~~~~~~~~~~~L~~L~l~~ 144 (369)
.+...+...++|+.|+++.
T Consensus 119 ~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 119 VEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HHHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHHHhCCCccEeeCcC
Confidence 1233444556666666544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.54 E-value=6.8e-06 Score=63.02 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=29.9
Q ss_pred CCCCCcEEEeccCCCc-----CCCcccCCCCCCcEEeccCCCCcc-----CCCCCCCCCCCCEEEcCCCCCC
Q 017590 180 DLNKLETLSLFECRGL-----VLPPLLSGLSSLKKLELGDCEIME-----IPPDIGCLSSLESLNLSGNNIE 241 (369)
Q Consensus 180 ~~~~L~~L~l~~~~~~-----~~~~~~~~~~~L~~L~l~~~~~~~-----~~~~~~~~~~L~~L~l~~~~l~ 241 (369)
..+.|++|++++|..+ .+...+...+.|++|++++|.+.. +...+...++|++|++++|.+.
T Consensus 42 ~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 42 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred hCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence 3445555555555422 111223334556666666665544 2223444556666666665433
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.98 E-value=0.00023 Score=54.01 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=27.2
Q ss_pred CCCCCCEEeCcCccccc-----ccchhhccCCcCcEEecCCCcCccc----CchhhhccCccceecccccc
Q 017590 61 CLPNLETLEMSFCNSLK-----RLSTSICKLKSLRSLDLSYCINLES----FPEILEKMELLEEINLEEAS 122 (369)
Q Consensus 61 ~l~~L~~L~l~~~~~~~-----~~~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~ 122 (369)
+.+.|++|+++++...+ .+...+...++|++|++++|..... +...+...+.++.+++.+|.
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~ 85 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 85 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccc
Confidence 34555555555432211 1223334455555555555533222 22333444555555555443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.97 E-value=0.00037 Score=52.82 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=57.5
Q ss_pred CeeEEEcCC-cccc-----ccCcccCCCCCCCEEeCcCcccccc----cchhhccCCcCcEEecCCCcCccc----Cchh
Q 017590 41 NVVELNLMC-TPIE-----EVPLSIECLPNLETLEMSFCNSLKR----LSTSICKLKSLRSLDLSYCINLES----FPEI 106 (369)
Q Consensus 41 ~L~~L~l~~-~~~~-----~l~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~~~~~----~~~~ 106 (369)
.|++|++++ +.++ .+-..+...++|++|++++|..... +...+.....++.+++++|..... +...
T Consensus 18 ~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~ 97 (166)
T d1io0a_ 18 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA 97 (166)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG
T ss_pred CCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHH
Confidence 555666643 3343 2333455667777777777654332 233445567777777777654432 2345
Q ss_pred hhccCccceecccc--ccccc----ccchhhhcccCCCeEeecC
Q 017590 107 LEKMELLEEINLEE--ASNIK----ELPSSIENLEGLKQLKLTG 144 (369)
Q Consensus 107 ~~~l~~L~~L~l~~--~~~~~----~~~~~~~~~~~L~~L~l~~ 144 (369)
+...+.|+.+++.. +.... .+...+...+.|+.|++..
T Consensus 98 l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 98 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcC
Confidence 55666777655542 22211 2334455677777777754
Done!