BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017591
(369 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 27/301 (8%)
Query: 15 RFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEI 72
RF+L +L ++N+S K LG GGFG VYKG+ +G +A K LK + E QF E+
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 73 GTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEV---LKWEKLLDIAI 129
I H NL+RL GFC T+ LVY +M NGS+ L E L W K IA+
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG 189
G+ARG+AYLH+ C+ +IIH D+K ANILLD +F A V DFGLAKL + ++ H RG
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRG 205
Query: 190 TPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII-GRR-----KNAQDCSSDTLDWFPKQV 243
T G+ APE+L ++K DV+ +G++L E+I G+R + A D LDW
Sbjct: 206 TIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV---- 260
Query: 244 WDEYEKGELAAKVLGCGIEEN-----DREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
KG L K L ++ + EE E++ VAL C Q P RP MS VV+MLE
Sbjct: 261 -----KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 299 G 299
G
Sbjct: 316 G 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 167/301 (55%), Gaps = 27/301 (8%)
Query: 15 RFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEI 72
RF+L +L ++N+ K LG GGFG VYKG+ +G +A K LK + E QF E+
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 73 GTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEV---LKWEKLLDIAI 129
I H NL+RL GFC T+ LVY +M NGS+ L E L W K IA+
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG 189
G+ARG+AYLH+ C+ +IIH D+K ANILLD +F A V DFGLAKL + ++ H RG
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRG 197
Query: 190 TPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII-GRR-----KNAQDCSSDTLDWFPKQV 243
G+ APE+L ++K DV+ +G++L E+I G+R + A D LDW
Sbjct: 198 XIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV---- 252
Query: 244 WDEYEKGELAAKVLGCGIEEN-----DREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
KG L K L ++ + EE E++ VAL C Q P RP MS VV+MLE
Sbjct: 253 -----KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
Query: 299 G 299
G
Sbjct: 308 G 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 12/290 (4%)
Query: 15 RFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEI 72
R L L TNN+ K +G G FG VYKG +G K+A K +T + + +F EI
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-RRTPESSQGIEEFETEI 86
Query: 73 GTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTD---TEVLKWEKLLDIAI 129
T+ H +LV L GFC ++ + L+Y++MENG+L ++L+ T + WE+ L+I I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG 189
G ARG+ YLH + IIH D+K NILLD F K+ DFG++K + +G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 190 TPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
T GY PE+ ++ +T+K DVYSFG++LFE++ R + + + +
Sbjct: 204 TLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 250 GELAAKVLGCGIEENDREEAER-MSMVALWCVQDCPEARPPMSAVVKMLE 298
G+L +++ + + R E+ R A+ C+ E RP M V+ LE
Sbjct: 263 GQL-EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 153/290 (52%), Gaps = 12/290 (4%)
Query: 15 RFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEI 72
R L L TNN+ K +G G FG VYKG +G K+A K +T + + +F EI
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-RRTPESSQGIEEFETEI 86
Query: 73 GTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTD---TEVLKWEKLLDIAI 129
T+ H +LV L GFC ++ + L+Y++MENG+L ++L+ T + WE+ L+I I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG 189
G ARG+ YLH + IIH D+K NILLD F K+ DFG++K +G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 190 TPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
T GY PE+ ++ +T+K DVYSFG++LFE++ R + + + +
Sbjct: 204 TLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 250 GELAAKVLGCGIEENDREEAER-MSMVALWCVQDCPEARPPMSAVVKMLE 298
G+L +++ + + R E+ R A+ C+ E RP M V+ LE
Sbjct: 263 GQL-EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 143/296 (48%), Gaps = 21/296 (7%)
Query: 16 FTLEQLCSFTNNYS--------TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLN---KRV 64
F+ +L + TNN+ K+G GGFGVVYKG + N +A K L ++ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-DKYLFTD-TEVLKWE 122
+ QF EI + + H NLV L GF D LVY +M NGSL D+ D T L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
IA G A GI +LHE + IH DIK ANILLD F+AK++DFGLA+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
S GT Y APE L IT K D+YSFG++L EII + L
Sbjct: 191 MXSRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 246
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ ++ + + + + D E M VA C+ + RP + V ++L+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 140/296 (47%), Gaps = 21/296 (7%)
Query: 16 FTLEQLCSFTNNYS--------TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLN---KRV 64
F+ +L + TNN+ K+G GGFGVVYKG + N +A K L ++ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYL--FTDTEVLKWE 122
+ QF EI + + H NLV L GF D LVY +M NGSL L T L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
IA G A GI +LHE + IH DIK ANILLD F+AK++DFGLA+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
GT Y APE L IT K D+YSFG++L EII + L
Sbjct: 191 MXXRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 246
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ ++ + + + + D E M VA C+ + RP + V ++L+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 142/296 (47%), Gaps = 21/296 (7%)
Query: 16 FTLEQLCSFTNNYS--------TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLN---KRV 64
F+ +L + TNN+ K+G GGFGVVYKG + N +A K L ++ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-DKYLFTD-TEVLKWE 122
+ QF EI + + H NLV L GF D LVY +M NGSL D+ D T L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
IA G A GI +LHE + IH DIK ANILLD F+AK++DFGLA+
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
GT Y APE L IT K D+YSFG++L EII + L
Sbjct: 185 MXXRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 240
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ ++ + + + + D E M VA C+ + RP + V ++L+
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 115/220 (52%), Gaps = 19/220 (8%)
Query: 16 FTLEQLCSFTNNYS--------TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLN---KRV 64
F+ +L + TNN+ K G GGFGVVYKG + N +A K L ++ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-DKYLFTD-TEVLKWE 122
+ QF EI + H NLV L GF D LVY + NGSL D+ D T L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
IA G A GI +LHE + IH DIK ANILLD F+AK++DFGLA+
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
S GT Y APE L IT K D+YSFG++L EII
Sbjct: 182 XXSRIVGTTAYXAPEAL--RGEITPKSDIYSFGVVLLEII 219
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 27/286 (9%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLV 84
N K+GAG FG V++ ++ +G +A KIL + +RV +F+ E+ + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIV 97
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTD--TEVLKWEKLLDIAIGTARGIAYLHEEC 142
G ++V E++ GSL + L E L + L +A A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
N I+H ++K N+L+D K++ KV DFGL++L +T S+ GTP + APE +LR+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSKSAAGTPEWMAPE-VLRD 213
Query: 203 YPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV-LGCGI 261
P +K DVYSFG++L+E+ TL +Q W ++ A V C
Sbjct: 214 EPSNEKSDVYSFGVILWELA------------TL----QQPWGNLNPAQVVAAVGFKCKR 257
Query: 262 EENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPP 307
E R +++ + C + P RP + ++ +L ++ PP
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 141/286 (49%), Gaps = 27/286 (9%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLV 84
N K+GAG FG V++ ++ +G +A KIL + +RV +F+ E+ + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIV 97
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTD--TEVLKWEKLLDIAIGTARGIAYLHEEC 142
G ++V E++ GSL + L E L + L +A A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
N I+H D+K N+L+D K++ KV DFGL++L + GTP + APE +LR+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPE-VLRD 213
Query: 203 YPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV-LGCGI 261
P +K DVYSFG++L+E+ TL +Q W ++ A V C
Sbjct: 214 EPSNEKSDVYSFGVILWELA------------TL----QQPWGNLNPAQVVAAVGFKCKR 257
Query: 262 EENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPP 307
E R +++ + C + P RP + ++ +L ++ PP
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 88 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 143
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 200
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 245
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 246 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 83 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 138
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 195
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 240
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 241 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 139
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 196
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 241
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 73 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 128
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 185
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 230
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 231 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K +K E F+ E + + H LV+L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKE--GSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV+EFME+G L YL T + E LL + + G+AYL E C +
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 201
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 246
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 247 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 139
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 196
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 241
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 86 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 141
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 198
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 243
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 244 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 87 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 142
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 199
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 244
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 245 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 80 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 135
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 192
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 237
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 238 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 79 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 134
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 191
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 236
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 237 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L +N + G + ++APE + NY T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAI--NYGTFTIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K ++ E F+ E + + H LV+L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV+EFME+G L YL T + E LL + + G+AYL E C +
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 184
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 229
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K ++ E F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV+EFME+G L YL T + E LL + + G+AYL E C +
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 181
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 226
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K ++ E F+ E + + H LV+L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV+EFME+G L YL T + E LL + + G+AYL E C +
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 179
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 224
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 74 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 129
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
+++ ANIL+ S K+ADFGLA+L +N + + G + ++APE + NY T K
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI--NYGTFTIK 186
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 231
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 232 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K ++ E F+ E + + H LV+L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV EFME+G L YL T + E LL + + G+AYL E C +
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 182
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 227
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 24/272 (8%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ ++G+G FG+V+ G + N K+A K ++ E F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C +Q LV+EFME+G L YL T + E LL + + G+AYL E +
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASV 124
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLRNYPI 205
IH D+ N L+ KV+DFG+ + ++ + S++G + +++PE F Y
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRY-- 181
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
+ K DV+SFG+L++E+ K + S++ +V ++ G K
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYK---------P 226
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKML 297
R + + + C ++ PE RP S +++ L
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 32 LGAGGFGVVYKGQFPNG-----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+GAG FG VYKG V +A K LK ++ F+ E G +G+ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G ++ E+MENG+LDK+L +L+ + G A G+ YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNY 168
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNY 203
+H D+ NIL+++ KV+DFGL+++ +PE T+ +TSG + ++APE + R +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY-TTSGGKIPIRWTAPEAISYRKF 227
Query: 204 PITQKCDVYSFGMLLFEII 222
T DV+SFG++++E++
Sbjct: 228 --TSASDVWSFGIVMWEVM 244
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 9/197 (4%)
Query: 29 STKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
ST++G+G FG VYKG++ V A KILK + Q F E+ + +T H+N++
Sbjct: 41 STRIGSGSFGTVYKGKWHGDV--AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G+ + A+V ++ E SL K+L + +L+DIA TA+G+ YLH + II
Sbjct: 99 GYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNII 154
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR--NYPI 205
H D+K NI L + K+ DFGLA + + + G+ + APE + N P
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 206 TQKCDVYSFGMLLFEII 222
+ + DVYS+G++L+E++
Sbjct: 215 SFQSDVYSYGIVLYELM 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG G V+ G + K+A K LK F+AE + + H LVRLY
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Q ++ E+MENGSL +L T + + L KLLD+A A G+A++ E + IH
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ S K+ADFGLA+L + + G + ++APE + NY T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAI--NYGTFTIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + ++ +V E+G + C
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMVRPDNC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C ++ PE RP + +LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + +KL+DIA TARG+ YLH + IIH D
Sbjct: 78 -TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF--LLRNYPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + + P + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 194 SDVYAFGIVLYELM 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 12/195 (6%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLGAG FG V+ G + N K+A K LK V+A F+ E + H LVRLY
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQA-FLEEANLMKTLQHDKLVRLYAVV 76
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT--EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ ++ EFM GSL +L +D +VL KL+D + A G+AY+ + IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYP-ITQ 207
D++ AN+L+ K+ADFGLA++ +N + + G + ++APE + N+ T
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFGCFTI 189
Query: 208 KCDVYSFGMLLFEII 222
K +V+SFG+LL+EI+
Sbjct: 190 KSNVWSFGILLYEIV 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 12/195 (6%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LGAG FG V+ G + N K+A K LK V+A F+ E + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQA-FLEEANLMKTLQHDKLVRLYAVV 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT--EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ ++ E+M GSL +L +D +VL KL+D + A G+AY+ + IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYP-ITQ 207
D++ AN+L+ K+ADFGLA++ +N + + G + ++APE + N+ T
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFGCFTI 190
Query: 208 KCDVYSFGMLLFEII 222
K DV+SFG+LL+EI+
Sbjct: 191 KSDVWSFGILLYEIV 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 89
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + +KL+DIA TARG+ YLH + IIH D
Sbjct: 90 -TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF--LLRNYPITQK 208
+K NI L + K+ DFGLA + + G+ + APE + + P + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 206 SDVYAFGIVLYELM 219
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 89
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ A+V ++ E SL +L + +KL+DIA TARG+ YLH + IIH D
Sbjct: 90 -TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF--LLRNYPITQK 208
+K NI L + K+ DFGLA + + G+ + APE + + P + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 206 SDVYAFGIVLYELM 219
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 22/268 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LG+G FGVV G++ +A K++K E +F E T+ + H LV+ YG C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ +V E++ NG L YL + + L+ +LL++ G+A+L + + IH D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRD 129
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCD 210
+ N L+D KV+DFG+ + ++ + S+ G + +SAPE + + + K D
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPE-VFHYFKYSSKSD 187
Query: 211 VYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREEAE 270
V++FG+L++E+ K +D Y E+ KV ++
Sbjct: 188 VWAFGILMWEVFS---------------LGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD 232
Query: 271 RMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ + C + PE RP ++ +E
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 100
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 101 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 217 SDVYAFGIVLYELM 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 101
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 218 SDVYAFGIVLYELM 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 29/205 (14%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FGVV K ++ +A K +++ ++ F+ E+ + R H N+V+LYG C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL 72
Query: 92 DQTKAALVYEFMENGSLDKYL--------FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
+ LV E+ E GSL L +T + W + ++G+AYLH
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQP 124
Query: 144 QRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLR 201
+ +IH D+KP N+LL A + K+ DFG A C+ + TH + + +G+ + APE F
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ-THMTNN--KGSAAWMAPEVFEGS 179
Query: 202 NYPITQKCDVYSFGMLLFEIIGRRK 226
NY ++KCDV+S+G++L+E+I RRK
Sbjct: 180 NY--SEKCDVFSWGIILWEVITRRK 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 78
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 195 SDVYAFGIVLYELM 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 78
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 195 SDVYAFGIVLYELM 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 29/205 (14%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FGVV K ++ +A K +++ ++ F+ E+ + R H N+V+LYG C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL 71
Query: 92 DQTKAALVYEFMENGSLDKYL--------FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
+ LV E+ E GSL L +T + W + ++G+AYLH
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQP 123
Query: 144 QRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE-FLLR 201
+ +IH D+KP N+LL A + K+ DFG A C+ + TH + + +G+ + APE F
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ-THMTNN--KGSAAWMAPEVFEGS 178
Query: 202 NYPITQKCDVYSFGMLLFEIIGRRK 226
NY ++KCDV+S+G++L+E+I RRK
Sbjct: 179 NY--SEKCDVFSWGIILWEVITRRK 201
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 75
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 76 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 192 SDVYAFGIVLYELM 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 73
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 190 SDVYAFGIVLYELM 203
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLGAG FG V+ + K+A K +K + VEA F+AE + H LV+L+
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA-FLAEANVMKTLQHDKLVKLHAVV 79
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ ++ EFM GSL +L +D KL+D + A G+A++ + + IH
Sbjct: 80 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHR 135
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ A K+ADFGLA++ +N + + G + ++APE + N+ T K
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFGSFTIK 192
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + S+ +V E+G + C
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALERGYRMPRPENC--------- 237
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + + C ++ PE RP + +L+
Sbjct: 238 PEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLGAG FG V+ + K+A K +K + VEA F+AE + H LV+L+
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA-FLAEANVMKTLQHDKLVKLHAVV 252
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLK-WEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ ++ EFM GSL +L +D + KL+D + A G+A++ + + IH
Sbjct: 253 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHR 308
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ A K+ADFGLA++ +N + + G + ++APE + N+ T K
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFGSFTIK 365
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + S+ +V E+G + C
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALERGYRMPRPENC--------- 410
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + + C ++ PE RP + +L+
Sbjct: 411 PEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 34/300 (11%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A KIL + +FM E + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T LV + M +G L +Y+ + + + LL+ + A+G+ YL E +R+
Sbjct: 83 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ + K+ DFGLA+L + + G + + A E + T
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE-CIHYRKFT 197
Query: 207 QKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP-KQVWDEYEKGELAAKVLGCGIEEND 265
+ DV+S+G+ ++E++ D P +++ D EKGE + C I+
Sbjct: 198 HQSDVWSYGVTIWELMT-------FGGKPYDGIPTREIPDLLEKGERLPQPPICTID--- 247
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPK-PFRYLYSIGMDALKSP 324
M MV W + ++RP K E E + P RYL G D +K P
Sbjct: 248 ----VYMVMVKCWMID--ADSRP------KFKELAAEFSRMARDPQRYLVIQGDDRMKLP 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A KIL + +FM E + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T LV + M +G L +Y+ + + + LL+ + A+G+ YL E +R+
Sbjct: 106 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 161
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPI 205
+H D+ N+L+ + K+ DFGLA+L + + G + + A E + R +
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF-- 219
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP-KQVWDEYEKGELAAKVLGCGIEEN 264
T + DV+S+G+ ++E++ D P +++ D EKGE + C I+
Sbjct: 220 THQSDVWSYGVTIWELM-------TFGGKPYDGIPTREIPDLLEKGERLPQPPICTID-- 270
Query: 265 DREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPK-PFRYLYSIGMDALKS 323
M MV W + ++RP K E E + P RYL G D +K
Sbjct: 271 -----VYMVMVKCWMID--ADSRP------KFKELAAEFSRMARDPQRYLVIQGDDRMKL 317
Query: 324 P 324
P
Sbjct: 318 P 318
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 73
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + + G+ + APE + P + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 190 SDVYAFGIVLYELM 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 93
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 94 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + G+ + APE + P + +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 210 SDVYAFGIVLYELM 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 101
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + G+ + APE + P + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 218 SDVYAFGIVLYELM 231
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G+G FG VYKG++ V + + ++++A F E+G + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYS 73
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ + A+V ++ E SL +L + KL+DIA TA+G+ YLH + IIH D
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN--YPITQK 208
+K NI L + K+ DFGLA + + G+ + APE + P + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 209 CDVYSFGMLLFEII 222
DVY+FG++L+E++
Sbjct: 190 SDVYAFGIVLYELM 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 15/200 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVK----IAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V +G+ K +A K LK +R +F++E +G+ H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ EFMENG+LD +L + +L+ + G A G+ YL E +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYV 140
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS----GYRGTPGYSAPEFL-LRN 202
H D+ NIL+++ KV+DFGL++ EN+ D T G + ++APE + R
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLE-ENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ T D +S+G++++E++
Sbjct: 200 F--TSASDAWSYGIVMWEVM 217
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 49/304 (16%)
Query: 16 FTLEQLCSFTNN---YSTKLGAGGFGVVYKGQF---PNGVKIAAKIL-----KTCLNKRV 64
F +L + +N Y ++G GGFG+V+KG+ + V I + IL +T + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL 124
+ +F E+ + H N+V+LYG ++ + +V EF+ G L L +KW
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LDIAIGTARGIAYLHEECNQRIIHYDIKPANILL-----DAKFSAKVADFGLAKLCNPEN 179
L + + A GI Y+ + N I+H D++ NI L +A AKVADFGL++ ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QS 179
Query: 180 THDSTSGYRGTPGYSAPEFL-LRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW 238
H S SG G + APE + T+K D YSF M+L+ I+
Sbjct: 180 VH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG-------------- 224
Query: 239 FPKQVWDEYEKGELAAKVLGCGIEENDREE-----AERMSMVALWCVQDCPEARPPMSAV 293
+ +DEY G++ K + EE R R+ V C P+ RP S +
Sbjct: 225 --EGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 294 VKML 297
VK L
Sbjct: 281 VKEL 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 19/202 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVK----IAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V +G+ K +A K LK +R +F++E +G+ H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ EFMENG+LD +L + +L+ + G A G+ YL E +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYV 138
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG------YSAPEFL-L 200
H D+ NIL+++ KV+DFGL++ EN+ D T Y + G ++APE +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLE-ENSSDPT--YTSSLGGKIPIRWTAPEAIAF 195
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
R + T D +S+G++++E++
Sbjct: 196 RKF--TSASDAWSYGIVMWEVM 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ +H
Sbjct: 75 VSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 188
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 189 SDVWSFGILLTELTTK 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 16 FTLEQLCSFTNN---YSTKLGAGGFGVVYKGQF---PNGVKIAAKIL-----KTCLNKRV 64
F +L + +N Y ++G GGFG+V+KG+ + V I + IL +T + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL 124
+ +F E+ + H N+V+LYG ++ + +V EF+ G L L +KW
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LDIAIGTARGIAYLHEECNQRIIHYDIKPANILL-----DAKFSAKVADFGLAKLCNPEN 179
L + + A GI Y+ + N I+H D++ NI L +A AKVADFG ++ ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QS 179
Query: 180 THDSTSGYRGTPGYSAPEFL-LRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW 238
H S SG G + APE + T+K D YSF M+L+ I+
Sbjct: 180 VH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG-------------- 224
Query: 239 FPKQVWDEYEKGELAAKVLGCGIEENDREE-----AERMSMVALWCVQDCPEARPPMSAV 293
+ +DEY G++ K + EE R R+ V C P+ RP S +
Sbjct: 225 --EGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 294 VKML 297
VK L
Sbjct: 281 VKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 16 FTLEQLCSFTNN---YSTKLGAGGFGVVYKGQF---PNGVKIAAKIL-----KTCLNKRV 64
F +L + +N Y ++G GGFG+V+KG+ + V I + IL +T + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL 124
+ +F E+ + H N+V+LYG ++ + +V EF+ G L L +KW
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LDIAIGTARGIAYLHEECNQRIIHYDIKPANILL-----DAKFSAKVADFGLAKLCNPEN 179
L + + A GI Y+ + N I+H D++ NI L +A AKVADF L++ ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QS 179
Query: 180 THDSTSGYRGTPGYSAPEFL-LRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW 238
H S SG G + APE + T+K D YSF M+L+ I+
Sbjct: 180 VH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG-------------- 224
Query: 239 FPKQVWDEYEKGELAAKVLGCGIEENDREE-----AERMSMVALWCVQDCPEARPPMSAV 293
+ +DEY G++ K + EE R R+ V C P+ RP S +
Sbjct: 225 --EGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 294 VKML 297
VK L
Sbjct: 281 VKEL 284
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ +H
Sbjct: 72 VSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + G + ++APE L T K
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGR-FTIK 185
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 186 SDVWSFGILLTELTTK 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ E N +H
Sbjct: 332 SEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 387
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 445
Query: 210 DVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 446 DVWSFGILLTELTTK 460
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G + +A K LK+ ++ F++E +G+ H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G T ++ EFMENGSLD +L + +L+ + G A G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYV 157
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPEN---THDSTSGYRGTPGYSAPEFLLRNYP 204
H D+ NIL+++ KV+DFGL++ + T+ S G + ++APE ++
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-AIQYRK 216
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 217 FTSASDVWSYGIVMWEVM 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ E N +H
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 304
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 210 DVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 363 DVWSFGILLTELTTK 377
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ +H
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 210 DVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 363 DVWSFGILLTELTTK 377
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGLA++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L +T + L+ +L+D++ A G+AY+ +H
Sbjct: 79 VSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 192
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 193 SDVWSFGILLTELTTK 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 33/288 (11%)
Query: 32 LGAGGFGVVYKGQF----PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G+G G V G+ V +A K LK +R F++E +G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G A +V E+MENGSLD +L T +L+ + G G+ YL + +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYV 173
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPE-NTHDSTSGYRGTPGYSAPEFL-LRNYPI 205
H D+ N+L+D+ KV+DFGL+++ + + +T+G + ++APE + R +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF-- 231
Query: 206 TQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEE 263
+ DV+SFG++++E++ G R + D + E+G +GC
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--------SSVEEGYRLPAPMGC---- 279
Query: 264 NDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFR 311
+ + L C RP S +V +L+ ++ P+ R
Sbjct: 280 -----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA---LIRSPESLR 319
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 35/289 (12%)
Query: 32 LGAGGFGVVYKGQF----PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G+G G V G+ V +A K LK +R F++E +G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G A +V E+MENGSLD +L T +L+ + G G+ YL + +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYV 173
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ N+L+D+ KV+DFGL+++ +P+ + +T G + ++APE + R +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG-KIPIRWTAPEAIAFRTF- 231
Query: 205 ITQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIE 262
+ DV+SFG++++E++ G R + D + E+G +GC
Sbjct: 232 -SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--------SSVEEGYRLPAPMGC--- 279
Query: 263 ENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFR 311
+ + L C RP S +V +L+ ++ P+ R
Sbjct: 280 ------PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA---LIRSPESLR 319
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LG G FG V+ G + K+A K LK F+ E + + H LV+LY
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKP--GTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 91 YDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L + LK L+D+A A G+AY+ IH
Sbjct: 74 SEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ K+ADFGLA+L +N + G + ++APE L T K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 187
Query: 210 DVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREEA 269
DV+SFG+LL E++ + + ++ ++V ++ E+G C I ++
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNN------REVLEQVERGYRMPCPQDCPISLHE---- 237
Query: 270 ERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ + C + PE RP + LE
Sbjct: 238 -----LMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L +T + L+ +L+D+A A G+AY+ E N +H
Sbjct: 249 SEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 304
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 210 DVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 363 DVWSFGILLTELTTK 377
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 157
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 158 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 215
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 216 -TSASDVWSYGIVLWEVM 232
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE +
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYR-KF 198
Query: 206 TQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 199 TSASDVWSYGIVLWEVM 215
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 167
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 225
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 226 -TSASDVWSYGIVLWEVM 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 71 VSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 184
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 185 SDVWSFGILLTELTTK 200
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 73 VSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 186
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 187 SDVWSFGILLTELTTK 202
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L +T + L+ +L+D++ A G+AY+ +H
Sbjct: 79 VSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + G + ++APE L T K
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGR-FTIK 192
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 193 SDVWSFGILLTELTTK 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLGAG FG V+ + K+A K +K + VEA F+AE + H LV+L+
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA-FLAEANVMKTLQHDKLVKLHAVV 246
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLK-WEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ ++ EFM GSL +L +D + KL+D + A G+A++ + + IH
Sbjct: 247 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHR 302
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQK 208
D++ ANIL+ A K+ADFGLA++ G + ++APE + N+ T K
Sbjct: 303 DLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAI--NFGSFTIK 349
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV+SFG+LL EI+ + S+ +V E+G + C
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALERGYRMPRPENC--------- 394
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + + C ++ PE RP + +L+
Sbjct: 395 PEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL ++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Query: 30 TKLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV K Q P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + E L ++I RG+AYL E+ +I+H
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMH 138
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y APE L + Q
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMAPERLQGTHYSVQ- 193
Query: 209 CDVYSFGMLLFEI-IGR 224
D++S G+ L E+ +GR
Sbjct: 194 SDIWSMGLSLVELAVGR 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 24/269 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G FG V+ G + ++A K LK N EA F+ E + + H LV+LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 249
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ E N +H
Sbjct: 250 SEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 305
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D++ ANIL+ KVADFGL +L +N + + G + ++APE L T K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 363
Query: 210 DVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREEA 269
DV+SFG+LL E+ + + + ++V D+ E+G C
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGYRMPCPPEC---------P 408
Query: 270 ERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E + + C + PE RP + LE
Sbjct: 409 ESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ V +A K LK ++ F+ E +G+ H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V EFMENG+LD +L +L+ + G A G+ YL + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYV 167
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
H D+ NIL+++ KV+DFGL+++ +PE + +T G + ++APE ++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG-KIPVRWTAPE-AIQYRKF 225
Query: 206 TQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 226 TSASDVWSYGIVMWEVM 242
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 198
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 199 -TSASDVWSYGIVLWEVM 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
++G G FG V+ G+ + +A K + L ++A+F+ E + + H N+VRL G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
C + +V E ++ G +L T+ L+ + LL + A G+ YL +C IH
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY-PITQ 207
D+ N L+ K K++DFG+++ + + ++ G R P ++APE L NY +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 208 KCDVYSFGMLLFE 220
+ DV+SFG+LL+E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E MENGSLD +L +L+ + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + +++PE + R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKF- 227
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++L+E++
Sbjct: 228 -TSASDVWSYGIVLWEVM 244
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M GSL +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M G L +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G + +A K LK+ ++ F++E +G+ H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G T ++ EFMENGSLD +L + +L+ + G A G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYV 131
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPEN---THDSTSGYRGTPGYSAPEFLLRNYP 204
H + NIL+++ KV+DFGL++ + T+ S G + ++APE ++
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-AIQYRK 190
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 191 FTSASDVWSYGIVMWEVM 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 32/276 (11%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+GAG FG V G+ + +A K LK ++ F+ E +G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G +V E+MENGSLD +L + +L+ + G + G+ YL + +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYV 146
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFGL+++ +PE + +T G + ++APE + R +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIAFRKF- 204
Query: 205 ITQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIE 262
T DV+S+G++++E++ G R + + D + E+G + C
Sbjct: 205 -TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI--------KAVEEGYRLPSPMDC--- 252
Query: 263 ENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ + L C Q +RP +V ML+
Sbjct: 253 ------PAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG V+ G + ++A K LK F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-EVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
++ +V E+M G L +L + + L+ +L+D+A A G+AY+ +H
Sbjct: 82 VSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D++ ANIL+ KVADFGLA+L +N + + G + ++APE L T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 209 CDVYSFGMLLFEIIGR 224
DV+SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTTK 211
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
++G G FG V+ G+ + +A K + L ++A+F+ E + + H N+VRL G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
C + +V E ++ G +L T+ L+ + LL + A G+ YL +C IH
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY-PITQ 207
D+ N L+ K K++DFG+++ + ++ G R P ++APE L NY +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 208 KCDVYSFGMLLFE 220
+ DV+SFG+LL+E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYS-KFS 184
Query: 207 QKCDVYSFGMLLFEI 221
K D+++FG+L++EI
Sbjct: 185 SKSDIWAFGVLMWEI 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFS 183
Query: 207 QKCDVYSFGMLLFEI 221
K D+++FG+L++EI
Sbjct: 184 SKSDIWAFGVLMWEI 198
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFS 179
Query: 207 QKCDVYSFGMLLFEI 221
K D+++FG+L++EI
Sbjct: 180 SKSDIWAFGVLMWEI 194
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 7/191 (3%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+LG G FGVV G++ +A K++K E +F+ E + H LV+LYG C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
Q ++ E+M NG L YL + ++LL++ + YL +++ +H D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCD 210
+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + + K D
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 203
Query: 211 VYSFGMLLFEI 221
+++FG+L++EI
Sbjct: 204 IWAFGVLMWEI 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFS 190
Query: 207 QKCDVYSFGMLLFEI 221
K D+++FG+L++EI
Sbjct: 191 SKSDIWAFGVLMWEI 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N L++ + KV+DFGL++ ++ + S+ G + +S PE L+ + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFS 184
Query: 207 QKCDVYSFGMLLFEI 221
K D+++FG+L++EI
Sbjct: 185 SKSDIWAFGVLMWEI 199
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ +LG G FGVV G++ +A K++K E +F+ E + H LV+L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
YG C Q ++ E+M NG L YL + ++LL++ + YL +++
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N L++ + KV+DFGL++ + + E T S+ G + +S PE L+ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET--SSVGSKFPVRWSPPEVLMYS-KF 198
Query: 206 TQKCDVYSFGMLLFEI 221
+ K D+++FG+L++EI
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 30/207 (14%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G + VYKG GV +A K +K + + + EI + H N+VRLY
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDT-------------EVLKWEKLLDIAIGTARGIA 136
+ + K LV+EFM+N L KY+ + T + +W+ L +G+A
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLL--------QGLA 122
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENTHDSTSGYRGTPGYSA 195
+ HE +I+H D+KP N+L++ + K+ DFGLA+ P NT S T Y A
Sbjct: 123 FCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV---VTLWYRA 176
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEII 222
P+ L+ + + D++S G +L E+I
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 190
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 245
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 246 SDIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 287
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 288 TPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVN-EPPPKLPSAVFSLEFQDFVNKCLI 345
Query: 328 VN 329
N
Sbjct: 346 KN 347
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 31/208 (14%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAK---------ILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+G GGFG VY+ F G ++A K I +T N R EA+ A + H N
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK------HPN 67
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
++ L G C + LV EF G L++ L + + + L++ A+ ARG+ YLH+E
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 143 NQRIIHYDIKPANILLDAKFS--------AKVADFGLAKLCNPENTHDSTSGYRGTPGYS 194
IIH D+K +NIL+ K K+ DFGLA+ + + Y +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY----AWM 181
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEII 222
APE ++R ++ DV+S+G+LL+E++
Sbjct: 182 APE-VIRASMFSKGSDVWSYGVLLWELL 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P+G + +A K+L+ + + + + E + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T LV + M G L ++ + L + LL+ + A+G++YL + R+
Sbjct: 85 LGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ + K+ DFGLA+L + + T G + + A E +LR T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR-FT 199
Query: 207 QKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP-KQVWDEYEKGELAAKVLGCGIEEND 265
+ DV+S+G+ ++E++ + D P +++ D EKGE + C I+
Sbjct: 200 HQSDVWSYGVTVWELMT-------FGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVY- 251
Query: 266 REEAERMSMVALWCVQDCPEARPPMSAVV 294
M MV W + E RP +V
Sbjct: 252 ------MIMVKCWMIDS--ECRPRFRELV 272
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 185 -DIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 225
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 328 VN 329
N
Sbjct: 284 KN 285
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 185 -DIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 225
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 328 VN 329
N
Sbjct: 284 KN 285
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 185 -DIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 225
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 328 VN 329
N
Sbjct: 284 KN 285
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 185 -DIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 225
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 328 VN 329
N
Sbjct: 284 KN 285
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FG VYK Q V AAK++ T + +E +M EI + H N+V+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDA 102
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Y + ++ EF G++D + L ++ + T + YLH + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL----RNYPI 205
D+K NIL K+ADFG++ T + GTP + APE ++ ++ P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 206 TQKCDVYSFGMLLFEI 221
K DV+S G+ L E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 144/302 (47%), Gaps = 30/302 (9%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 155
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 210
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDRE 267
D++S G+ L E+ +GR +P D E EL + GC +E + E
Sbjct: 211 SDIWSMGLSLVEMAVGR--------------YPIPPPDAKEL-EL---MFGCQVEGDAAE 252
Query: 268 EAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMDALKSPCRI 327
R + ++RPPM A+ ++L+ V PPK ++S+ + C I
Sbjct: 253 TPPRPRTPGRPLNKFGMDSRPPM-AIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLI 310
Query: 328 VN 329
N
Sbjct: 311 KN 312
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FG VYK Q V AAK++ T + +E +M EI + H N+V+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDA 102
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Y + ++ EF G++D + L ++ + T + YLH + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 150 DIKPANILLDAKFSAKVADFGL-AKLCNPENTHDSTSGYRGTPGYSAPEFLL----RNYP 204
D+K NIL K+ADFG+ AK DS + GTP + APE ++ ++ P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS---FIGTPYWMAPEVVMCETSKDRP 216
Query: 205 ITQKCDVYSFGMLLFEI 221
K DV+S G+ L E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 131
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ E ++ + GT Y +PE L + Q
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE----FVGTRSYMSPERLQGTHYSVQ- 186
Query: 209 CDVYSFGMLLFEI-IGRRKNAQDCSSDTLDWF 239
D++S G+ L E+ +GR + LD+
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 86
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT-GAKLPVKW 202
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 203 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 87
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 203
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 204 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 48 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 106
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 107 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 166
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 222
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 223 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 252
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 47 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 105
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 106 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 165
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 221
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 222 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 251
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 27 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 85
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 201
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 202 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 84
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 144
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 200
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 201 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 82
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 142
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 198
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 199 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FG VYK Q V AAK++ T + +E +M EI + H N+V+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDA 102
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Y + ++ EF G++D + L ++ + T + YLH + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTH--DSTSGYRGTPGYSAPEFLL----RNY 203
D+K NIL K+ADFG++ +NT + GTP + APE ++ ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 204 PITQKCDVYSFGMLLFEI 221
P K DV+S G+ L E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 21 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 79
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 80 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 195
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 196 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 87
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 203
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 204 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 86
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
YL +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKW 202
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 203 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 209 CDVYSFGMLLFEI-IGR 224
D++S G+ L E+ +GR
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 30 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 88
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT-GAKLPVKW 204
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 205 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 234
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G FG VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T + +G + ++APE L N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV++FG+LL+EI A S P QV++ EK + GC
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E++ + C Q P RP + + + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V G+ + +A K LK + F++E +G+ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ E+MENGSLD +L + +L+ + G G+ YL + +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAV 153
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFG++++ +PE + +T G + ++APE + R +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIAYRKF- 211
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 212 -TSASDVWSYGIVMWEVM 228
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V G+ + +A K LK + F++E +G+ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ E+MENGSLD +L + +L+ + G G+ YL + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 138
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFG++++ +PE + +T G + ++APE + R +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIAYRKF- 196
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 197 -TSASDVWSYGIVMWEVM 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 30 TKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LGAG GVV+K P+G+ +A K++ + + Q + E+ + +V YG
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
Y + ++ E M+ GSLD+ L + + + L ++I +G+ YL E+ +I+H
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSIAVIKGLTYLREK--HKIMH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP+NIL++++ K+ DFG++ + + + GT Y +PE L + Q
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 202
Query: 209 CDVYSFGMLLFEI-IGR 224
D++S G+ L E+ +GR
Sbjct: 203 SDIWSMGLSLVEMAVGR 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 32 LGAGGFGVVYKGQFP----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V G+ + +A K LK + F++E +G+ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ E+MENGSLD +L + +L+ + G G+ YL + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 132
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLC--NPENTHDSTSGYRGTPGYSAPEFL-LRNYP 204
H D+ NIL+++ KV+DFG++++ +PE + +T G + ++APE + R +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIAYRKF- 190
Query: 205 ITQKCDVYSFGMLLFEII 222
T DV+S+G++++E++
Sbjct: 191 -TSASDVWSYGIVMWEVM 207
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 146
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 262
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 263 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 87
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 203
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 204 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 30 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 88
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 204
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 205 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 234
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 27 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 85
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 201
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 202 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 34 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 92
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 93 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 152
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 208
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 209 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 238
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 35 GGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF----C 90
G FG V+K Q N +A KI L + Q EI + H NL++
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-------- 142
+ + L+ F + GSL YL ++ W +L +A +RG++YLHE+
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
I H D K N+LL + +A +ADFGLA P T G GT Y APE L
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 203 YPITQ----KCDVYSFGMLLFEIIGRRKNA 228
+ + D+Y+ G++L+E++ R K A
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQF--PNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRT 78
S +++ +G G FG VY G +G KI A K L + +QF+ E G I +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE-GIIMKD 87
Query: 79 Y-HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA 136
+ H N++ L G C + LV +M++G L ++ +T + L+ + A+G+
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPE--NTHDSTSGYRGTPGY 193
+L +++ +H D+ N +LD KF+ KVADFGLA+ + + E + H+ T G + +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKW 203
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
A E L+ T K DV+SFG+LL+E++ R
Sbjct: 204 MALES-LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 39 VVYKGQFPNGVKIAAK------ILKTCLNKRVEAQ--FMAEIGTIGRTYHINLVRLYGFC 90
V+ KG F +K+ + ++K + E Q F+ E+ + H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
Y + + E+++ G+L + + W + + A A G+AYLH + IIH D
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTH----------DSTSGYR--GTPGYSAPEF 198
+ N L+ + VADFGLA+L E T D Y G P + APE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 199 LL-RNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW 238
+ R+Y +K DV+SFG++L EIIGR D T+D+
Sbjct: 194 INGRSY--DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF 232
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 78
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN-KFSIK 193
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 194 SDVWAFGVLLWEI 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKT-CLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G +GVVYK + G +A K ++ ++ + + + EI + +H N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ + LV+EFME L K L + L+ ++ RG+A+ H+ RI+H
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHR 143
Query: 150 DIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
D+KP N+L+++ + K+ADFGLA+ + TH+ + + Y AP+ L+ + +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKKYS 198
Query: 207 QKCDVYSFGMLLFEII 222
D++S G + E+I
Sbjct: 199 TSVDIWSIGCIFAEMI 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKT-CLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G +GVVYK + G +A K ++ ++ + + + EI + +H N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ + LV+EFME L K L + L+ ++ RG+A+ H+ RI+H
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHR 143
Query: 150 DIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
D+KP N+L+++ + K+ADFGLA+ + TH+ + + Y AP+ L+ + +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKKYS 198
Query: 207 QKCDVYSFGMLLFEII 222
D++S G + E+I
Sbjct: 199 TSVDIWSIGCIFAEMI 214
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T + +G + ++APE L N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV++FG+LL+EI A S P QV++ EK + GC
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E++ + C Q P RP + + + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 195 SDVWAFGVLLWEI 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T + +G + ++APE L N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEENDREE 268
DV++FG+LL+EI A S P QV++ EK + GC
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC--------- 235
Query: 269 AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E++ + C Q P RP + + + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 198 SDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 198 SDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 198 SDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 195 SDVWAFGVLLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 195 SDVWAFGVLLWEI 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 198 SDVWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 138
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 196
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 197 SDVWAFGVLLWEI 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 90
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 205
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 206 SDVWAFGVLLWEI 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 84 LGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 139
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 198
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 199 HQSDVWSYGVTVWELM 214
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 193 SDVWAFGVLLWEI 205
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 87 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 142
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 201
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 202 HQSDVWSYGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 84 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 139
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 198
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 199 HQSDVWSYGVTVWELM 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 86 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 141
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 85 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 35 GGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQ 93
G FG VYK Q V AAK++ T + +E +M EI + H N+V+L Y +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 94 TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKP 153
++ EF G++D + L ++ + T + YLH + +IIH D+K
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 136
Query: 154 ANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL----RNYPITQKC 209
NIL K+ADFG++ N + GTP + APE ++ ++ P K
Sbjct: 137 GNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 210 DVYSFGMLLFEI 221
DV+S G+ L E+
Sbjct: 196 DVWSLGITLIEM 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 78
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T + +G + ++APE L N + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN-KFSIK 193
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 194 SDVWAFGVLLWEI 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 85 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 93 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 148
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 207
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 208 HQSDVWSYGVTVWELM 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 86 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 141
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 89 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 144
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 203
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 204 HQSDVWSYGVTVWELM 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 86 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 141
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 86 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 141
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 90 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 145
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T + +G + ++APE L N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 198 SDVWAFGVLLWEI 210
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 108 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 163
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 222
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 223 HQSDVWSYGVTVWELM 238
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 85 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES-LKTR 199
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 200 TFSHASDTWMFGVTLWEM 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 77 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 132
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 191
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 192 HQSDVWSYGVTVWELM 207
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 35 GGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQT 94
G FG V+K Q N +A KI + + Q E+ ++ H N+++ G T
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFP--IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 95 KAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-------N 143
L+ F E GSL +L V+ W +L IA ARG+AYLHE+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
I H DIK N+LL +A +ADFGLA + T G GT Y APE L
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209
Query: 204 PITQ----KCDVYSFGMLLFEIIGR 224
+ + D+Y+ G++L+E+ R
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 75 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES-LKTR 189
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 190 TFSHASDTWMFGVTLWEM 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 23/235 (9%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 96
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + +V E+M G+L YL + E + LL +A + + YL + + IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFIH 153
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-TFSIK 211
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP----KQVWDEYEKGELAAKVLGC 259
DV++FG+LL+EI ++ + +P QV+D EKG + GC
Sbjct: 212 SDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGC 256
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A G+ YL ++R+
Sbjct: 80 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE---DRRL 135
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 194
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 195 HQSDVWSYGVTVWELM 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 79 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 134
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTR 193
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 194 TFSHASDTWMFGVTLWEM 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 21/217 (9%)
Query: 16 FTLEQLCSFTNNYSTK--LGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAE 71
F + F++NY K LG G F VV + G++ AAKI+ T L+ R + E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 72 IGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT 131
+ H N+VRL+ +++ LV++ + G L F D ++ D +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCI 134
Query: 132 AR---GIAYLHEECNQRIIHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTS 185
+ IAY H + I+H ++KP N+LL +K + K+ADFGLA N ++
Sbjct: 135 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---EAWH 188
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G+ GTPGY +PE L ++ P ++ D+++ G++L+ ++
Sbjct: 189 GFAGTPGYLSPEVLKKD-PYSKPVDIWACGVILYILL 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG--VKIAAKI--LKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G VKI I L+ + + + + E + + ++ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 117 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 172
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 231
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 232 HQSDVWSYGVTVWELM 247
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 284
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 341
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
++ N L+ KVADFGL++L +T+ + +G + ++APE L N + K
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN-KFSIK 399
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 400 SDVWAFGVLLWEI 412
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 85 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTR 199
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 200 TFSHASDTWMFGVTLWEM 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 79 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 134
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTR 193
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 194 TFSHASDTWMFGVTLWEM 211
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 281
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 338
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
++ N L+ KVADFGL++L + T+ + +G + ++APE L N + K
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 396
Query: 209 CDVYSFGMLLFEI 221
DV++FG+LL+EI
Sbjct: 397 SDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 32/274 (11%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G +G VY+G + + +A K LK VE +F+ E + H NLV+L G
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLGV 323
Query: 90 CYDQTKAALVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + ++ EFM G+L YL + + + LL +A + + YL + + IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 380
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
++ N L+ KVADFGL++L + T+ + +G + ++APE L N + K
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 438
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP----KQVWDEYEKGELAAKVLGCGIEEN 264
DV++FG+LL+EI ++ + +P QV++ EK + GC
Sbjct: 439 SDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC----- 483
Query: 265 DREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
E++ + C Q P RP + + + E
Sbjct: 484 ----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FG VYK + G AAK+++T + +E ++ EI + H +V+L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGA 84
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Y K ++ EF G++D + L ++ + + +LH ++RIIH
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHR 141
Query: 150 DIKPANILLDAKFSAKVADFGL-AKLCNPENTHDSTSGYRGTPGYSAPEFL----LRNYP 204
D+K N+L+ + ++ADFG+ AK DS + GTP + APE + +++ P
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETMKDTP 198
Query: 205 ITQKCDVYSFGMLLFEI 221
K D++S G+ L E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 75 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTR 189
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 190 TFSHASDTWMFGVTLWEM 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQF--PNG--VKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLV 84
KLG G FGVV +G++ P+G V +A K LK + + EA F+ E+ + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
RLYG +V E GSL L L A+ A G+ YL ++
Sbjct: 75 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFLLRNY 203
R IH D+ N+LL + K+ DFGL + + H +R P + APE L+
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTR 189
Query: 204 PITQKCDVYSFGMLLFEI 221
+ D + FG+ L+E+
Sbjct: 190 TFSHASDTWMFGVTLWEM 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FG VYK + G AAK+++T + +E ++ EI + H +V+L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGA 76
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
Y K ++ EF G++D + L ++ + + +LH ++RIIH
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHR 133
Query: 150 DIKPANILLDAKFSAKVADFGL-AKLCNPENTHDSTSGYRGTPGYSAPEFL----LRNYP 204
D+K N+L+ + ++ADFG+ AK DS + GTP + APE + +++ P
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETMKDTP 190
Query: 205 ITQKCDVYSFGMLLFEI 221
K D++S G+ L E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
L +G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 90 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 145
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 85 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V G + G K+A K +K N F+AE + + H NLV+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 92 DQTKAA-LVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL YL + VL + LL ++ + YL +H
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 132
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D+ N+L+ AKV+DFGL K +T D+ + ++APE LR + K
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTG---KLPVKWTAPE-ALREAAFSTKS 186
Query: 210 DVYSFGMLLFEI 221
DV+SFG+LL+EI
Sbjct: 187 DVWSFGILLWEI 198
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 85 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
L +G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 90 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 145
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V G + G K+A K +K N F+AE + + H NLV+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 92 DQTKAA-LVYEFMENGSLDKYLFT-DTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL YL + VL + LL ++ + YL +H
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 141
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D+ N+L+ AKV+DFGL K +T D+ + ++APE LR + K
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTG---KLPVKWTAPE-ALREKKFSTKS 195
Query: 210 DVYSFGMLLFEI 221
DV+SFG+LL+EI
Sbjct: 196 DVWSFGILLWEI 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 85 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 140
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V G + G K+A K +K N F+AE + + H NLV+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 92 DQTKAA-LVYEFMENGSLDKYLFTD-TEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL YL + VL + LL ++ + YL +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 126
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D+ N+L+ AKV+DFGL K +T D+ + ++APE LR + K
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTG---KLPVKWTAPE-ALREKKFSTKS 180
Query: 210 DVYSFGMLLFEI 221
DV+SFG+LL+EI
Sbjct: 181 DVWSFGILLWEI 192
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
L +G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFGLAKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 87 LGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 142
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 201
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 202 HQSDVWSYGVTVWELM 217
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 83 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 32 LGAGGFGVVYKGQF-PNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG+G FG VYKG + P G + +A K L+ + + + + E + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C T L+ + M G L Y+ + + + LL+ + A+G+ YL ++R+
Sbjct: 90 LGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRL 145
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+ N+L+ K+ DFG AKL E G + + A E +L T
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 207 QKCDVYSFGMLLFEII 222
+ DV+S+G+ ++E++
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 24 FTNNYSTK--LGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTY 79
F++NY K LG G F VV + G++ AAKI+ T L+ R + E +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR---GIA 136
H N+VRL+ +++ LV++ + G L F D ++ D + + IA
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 118
Query: 137 YLHEECNQRIIHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
Y H + I+H ++KP N+LL +K + K+ADFGLA N ++ G+ GTPGY
Sbjct: 119 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGY 172
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+PE L ++ P ++ D+++ G++L+ ++
Sbjct: 173 LSPEVLKKD-PYSKPVDIWACGVILYILL 200
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 24 FTNNYSTK--LGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTY 79
F++NY K LG G F VV + G++ AAKI+ T L+ R + E +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR---GIA 136
H N+VRL+ +++ LV++ + G L F D ++ D + + IA
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 137 YLHEECNQRIIHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
Y H + I+H ++KP N+LL +K + K+ADFGLA N ++ G+ GTPGY
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGY 173
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+PE L ++ P ++ D+++ G++L+ ++
Sbjct: 174 LSPEVLKKD-PYSKPVDIWACGVILYILL 201
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V G + G K+A K +K N F+AE + + H NLV+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 92 DQTKAA-LVYEFMENGSLDKYLFTD-TEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
++ +V E+M GSL YL + VL + LL ++ + YL +H
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 313
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
D+ N+L+ AKV+DFGL K +T D+ + ++APE LR + K
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTG---KLPVKWTAPE-ALREKKFSTKS 367
Query: 210 DVYSFGMLLFEI 221
DV+SFG+LL+EI
Sbjct: 368 DVWSFGILLWEI 379
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 24 FTNNYSTK--LGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTY 79
F++NY K LG G F VV + G++ AAKI+ T L+ R + E +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR---GIA 136
H N+VRL+ +++ LV++ + G L F D ++ D + + IA
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 137 YLHEECNQRIIHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
Y H + I+H ++KP N+LL +K + K+ADFGLA N ++ G+ GTPGY
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGY 173
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+PE L ++ P ++ D+++ G++L+ ++
Sbjct: 174 LSPEVLKKD-PYSKPVDIWACGVILYILL 201
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLYGF 89
+G G +G K + + KI K L E Q + +E+ + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 90 CYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLD--IAIGTARGIAYLHEECNQR 145
D+T L V E+ E G L + T K + LD + + +EC++R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGT---KERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 146 ------IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDST--SGYRGTPGYSAPE 197
++H D+KPAN+ LD K + K+ DFGLA++ N HD++ + GTP Y +PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDTSFAKAFVGTPYYMSPE 186
Query: 198 FLLRNYPITQKCDVYSFGMLLFEI 221
+ R +K D++S G LL+E+
Sbjct: 187 QMNR-MSYNEKSDIWSLGCLLYEL 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 126
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + C+ ++ +T GT Y PE ++
Sbjct: 127 --SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLS--GTLDYLPPE-MI 179
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFL 201
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 28/262 (10%)
Query: 32 LGAGGFGVV----YKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V Y + N G ++A K LK A EI + YH N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 87 YGFCYDQ--TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C + L+ EF+ +GSL +YL + + ++ L A+ +G+ YL ++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
+ +H D+ N+L++++ K+ DFGL K + + R +P + APE L+++
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS- 204
Query: 204 PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEE 263
DV+SFG+ L E++ D S + F K + + G++ L ++E
Sbjct: 205 KFYIASDVWSFGVTLHELL----TYCDSDSSPMALFLKMIGPTH--GQMTVTRLVNTLKE 258
Query: 264 NDREEAERMSMVALWCVQDCPE 285
R L C +CP+
Sbjct: 259 GKR----------LPCPPNCPD 270
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLYGF 89
+G G +G K + + KI K L E Q + +E+ + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 90 CYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLD--IAIGTARGIAYLHEECNQR 145
D+T L V E+ E G L + T K + LD + + +EC++R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGT---KERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 146 ------IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
++H D+KPAN+ LD K + K+ DFGLA++ N + + T + GTP Y +PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQM 188
Query: 200 LRNYPITQKCDVYSFGMLLFEI 221
R +K D++S G LL+E+
Sbjct: 189 NR-MSYNEKSDIWSLGCLLYEL 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G +G+V K + + +I A K L++ +K V+ M EI + + H NLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 90 CYDQTKAALVYEFMENGSLDKY-LFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
C + + LV+EF+++ LD LF + L ++ + GI + H + IIH
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCH---SHNIIH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
DIKP NIL+ K+ DFG A+ L P +D R Y APE L+ + +
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR---WYRAPELLVGDVKYGK 204
Query: 208 KCDVYSFGMLLFEI 221
DV++ G L+ E+
Sbjct: 205 AVDVWAIGCLVTEM 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLYGF 89
+G G +G K + + KI K L E Q + +E+ + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 90 CYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLD--IAIGTARGIAYLHEECNQR 145
D+T L V E+ E G L + T K + LD + + +EC++R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGT---KERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 146 ------IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
++H D+KPAN+ LD K + K+ DFGLA++ N + D + GTP Y +PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDEDFAKEFVGTPYYMSPEQM 188
Query: 200 LRNYPITQKCDVYSFGMLLFEI 221
R +K D++S G LL+E+
Sbjct: 189 NR-MSYNEKSDIWSLGCLLYEL 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 28/262 (10%)
Query: 32 LGAGGFGVV----YKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V Y + N G ++A K LK A EI + YH N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 87 YGFCYDQ--TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C + L+ EF+ +GSL +YL + + ++ L A+ +G+ YL ++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
+ +H D+ N+L++++ K+ DFGL K + + R +P + APE L+++
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS- 192
Query: 204 PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEE 263
DV+SFG+ L E++ D S + F K + + G++ L ++E
Sbjct: 193 KFYIASDVWSFGVTLHELL----TYCDSDSSPMALFLKMIGPTH--GQMTVTRLVNTLKE 246
Query: 264 NDREEAERMSMVALWCVQDCPE 285
R L C +CP+
Sbjct: 247 GKR----------LPCPPNCPD 258
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 12/194 (6%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + + +A K+L KT L K VE Q E+ H N++RLYG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ +D T+ L+ E+ G++ + L ++ A ++Y H ++R+IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH---SKRVIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LL + K+ADFG + + P + D+ GT Y PE ++ +K
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLC---GTLDYLPPE-MIEGRMHDEK 190
Query: 209 CDVYSFGMLLFEII 222
D++S G+L +E +
Sbjct: 191 VDLWSLGVLCYEFL 204
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 132
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE-CINYYKF 191
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 192 SSKSDVWSFGVLMWE 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ S+D F D L L I +G+A+ H + R
Sbjct: 71 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 179
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ S+D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 86
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 204 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 138
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 197
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 198 SSKSDVWSFGVLMWE 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 146
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 205
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 206 SSKSDVWSFGVLMWE 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 93
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 245
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 24 FTNNYST--KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY 79
F N+ K+G G +GVVYK + V KI + V + + EI +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIA 136
H N+V+L + + K LV+EF+ D F D L L I +G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGY 193
+ H + R++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y
Sbjct: 125 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----Y 176
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE LL + D++S G + E++ RR
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 148
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 207
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 208 SSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 148
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 207
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 208 SSKSDVWSFGVLMWE 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 93
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Query: 8 IAREKPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQF----PNGVKIAAKILKTCLNKR 63
+A K V E++ + ++ +G G FGVVY G++ N ++ A K L +
Sbjct: 8 LAEVKDVLIPHERVVTHSDRV---IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ 64
Query: 64 VEAQFMAEIGTIGRTYHINLVRLYGFCYD-QTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
F+ E + H N++ L G + ++ +M +G L +++ + +
Sbjct: 65 QVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK 124
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTH 181
L+ + ARG+ YL E Q+ +H D+ N +LD F+ KVADFGLA+ + + E
Sbjct: 125 DLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
Query: 182 DSTSGYRGTP-GYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
+ P ++A E L+ Y T K DV+SFG+LL+E++ R
Sbjct: 182 VQQHRHARLPVKWTALES-LQTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 128
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 187
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 188 SSKSDVWSFGVLMWE 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ S+D F D L L I +G+A+ H + R
Sbjct: 72 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 125
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 180
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 82
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 200 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ S+D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 78
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 196 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 132
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 191
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 192 SSKSDVWSFGVLMWE 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 490
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 549
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 550 SSKSDVWSFGVLMWE 564
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 155
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 216 SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 85
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 203 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 93
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 126
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + D+ GT Y PE ++
Sbjct: 127 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLC---GTLDYLPPE-MI 179
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFL 201
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 126
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 185
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 186 SSKSDVWSFGVLMWE 200
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYKGQFP---NGVKIAAKILKTCLNK-RVEAQFMAEIGTIGRTYHINLVRL 86
+LG+G FG V KG + +A KILK N ++ + +AE + + + +VR+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV E E G L+KYL + V K + ++++ + G+ YL EE N
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL-EESN--F 491
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+H D+ N+LL + AK++DFGL+K L EN + + + + + APE + Y
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKF 550
Query: 206 TQKCDVYSFGMLLFE 220
+ K DV+SFG+L++E
Sbjct: 551 SSKSDVWSFGVLMWE 565
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVE---AQFMAEIGTIGRTYHINLVRLY 87
K+G G +GVVYK Q G A K K L K E + + EI + H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
+ + + LV+E ++ L K L L+ + GIAY H+ +R++
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 148 HYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRNYP 204
H D+KP N+L++ + K+ADFGLA+ + + TH+ + + Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSKK 177
Query: 205 ITQKCDVYSFGMLLFEIIG 223
+ D++S G + E++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVE---AQFMAEIGTIGRTYHINLVRLY 87
K+G G +GVVYK Q G A K K L K E + + EI + H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
+ + + LV+E ++ L K L L+ + GIAY H+ +R++
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 148 HYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRNYP 204
H D+KP N+L++ + K+ADFGLA+ + + TH+ + + Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSKK 177
Query: 205 ITQKCDVYSFGMLLFEIIG 223
+ D++S G + E++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 31 KLGAGGFGVVYKGQFPN------GVKIAAKILKT-CLNKRVEAQFMAEIGTIGRTYHINL 83
+LG G FG V+ + N + +A K LK L R + Q AE+ T H ++
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLT--NLQHEHI 79
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYL---------FTDTEV------LKWEKLLDIA 128
V+ YG C D +V+E+M++G L+K+L D + L ++L IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A G+ YL +Q +H D+ N L+ A K+ DFG+++ + + G+
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY-RVGGHT 195
Query: 189 GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYE 248
P P + T + DV+SFG++L+EI + KQ W +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---------------YGKQPWFQLS 240
Query: 249 KGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEG 299
E+ + + E R + + V L C Q P+ R + + K+L
Sbjct: 241 NTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 93
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + T+
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + I A K+L K L K VE Q E+ H N++RLYG
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHEECN 143
+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH---S 152
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+R+IH DIKP N+LL + K+ADFG + + P + D GT Y PE ++
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLC---GTLDYLPPE-MIEGR 207
Query: 204 PITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 208 MHDEKVDLWSLGVLCYEFL 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 152
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 213 SIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 145
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 153
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 214 SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 144
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 205 SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 145
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGX 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 28/234 (11%)
Query: 24 FTNNYSTKLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+T + + LG G FG V+K + G+K+AAKI+KT K E + EI + + H N
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHAN 147
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTARGIA 136
L++LY + LV E+++ G L + Y T+ + + + K + GI
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI------CEGIR 201
Query: 137 YLHEECNQRIIHYDIKPANIL---LDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
++H+ I+H D+KP NIL DAK K+ DFGLA+ P + GTP +
Sbjct: 202 HMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKP---REKLKVNFGTPEF 254
Query: 194 SAPEFLLRNYP-ITQKCDVYSFGMLLFEII-GRRKNAQDCSSDTLDWFPKQVWD 245
APE + NY ++ D++S G++ + ++ G D ++TL+ WD
Sbjct: 255 LAPEVV--NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVE---AQFMAEIGTIGRTYHINLVRLY 87
K+G G +GVVYK Q G A K K L K E + + EI + H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
+ + + LV+E ++ L K L L+ + GIAY H+ +R++
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 148 HYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRNYP 204
H D+KP N+L++ + K+ADFGLA+ + + TH+ + + Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW-----YRAPDVLMGSKK 177
Query: 205 ITQKCDVYSFGMLLFEIIG 223
+ D++S G + E++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 24 FTNNYST--KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY 79
F N+ K+G G +GVVYK + V KI + V + + EI +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIA 136
H N+V+L + + K LV+EF+ D F D L L I +G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGY 193
+ H + R++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y
Sbjct: 125 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----Y 176
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE LL + D++S G + E++ RR
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVYKGQF-------PNGV-KIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V + PN V K+A K+LK+ ++ + ++E+ IG+ H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--H 134
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------------FTDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E L + L+
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
A ARG+ YL +++ IH D+ N+L+ K+ADFGLA+ + + + T+
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+LL+EI
Sbjct: 252 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEI 286
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY D Y T+ L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 179
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + +T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 127
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 182
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 22/202 (10%)
Query: 31 KLGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
KLG+G +G V+ V+ A KI+ KT ++ ++ + E+ + H N+++LY
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 89 FCYDQTKAALVYEFMENGSL-DKYLFTDTEVLKWEKLLDIAIGTAR---GIAYLHEECNQ 144
F D+ LV E + G L D+ + +K+ + +D A+ + G+ YLH+
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHR----MKFNE-VDAAVIIKQVLSGVTYLHK---H 155
Query: 145 RIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
I+H D+KP N+LL++K K+ DFGL+ + + GT Y APE L +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRK 212
Query: 202 NYPITQKCDVYSFGMLLFEIIG 223
Y +KCDV+S G++LF ++
Sbjct: 213 KYD--EKCDVWSIGVILFILLA 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A + + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G + K E+ K K + T A ++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYK------ELQKLSKFDEQRTATYITELANALSYCH- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 183
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFL 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G+ G K+A KIL + + V + EI + H ++++LY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE-KLLDIAIGTARGIAYLHEECNQRII 147
T +V E++ G L Y+ V + E + L I +A + Y H ++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCHRHM---VV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
H D+KP N+LLDA +AK+ADFGL+ + + E DS G+P Y+APE +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC----GSPNYAAPEVISGRLYAG 189
Query: 207 QKCDVYSFGMLLFEII 222
+ D++S G++L+ ++
Sbjct: 190 PEVDIWSCGVILYALL 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FGVV++ + G AAK + T E EI T+ H LV L+
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDA 116
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
D + ++YEFM G L + + + + ++ ++ +G+ ++HE +H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHL 173
Query: 150 DIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP NI+ K S K+ DFGL +P+ + T+ GT ++APE + P+
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE-VAEGKPVGY 229
Query: 208 KCDVYSFGMLLFEII 222
D++S G+L + ++
Sbjct: 230 YTDMWSVGVLSYILL 244
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + D GT Y PE ++
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLC---GTLDYLPPE-MI 181
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFL 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 125
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 180
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G + K E+ K K + T A ++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYK------ELQKLSKFDEQRTATYITELANALSYCH- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS---GYRGTPGYSAPE 197
++R+IH DIKP N+LL + K+ADFG + H +S GT Y PE
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDYLPPE 181
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
++ +K D++S G+L +E +
Sbjct: 182 -MIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 125
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 180
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG G FGVV++ + G AAK + T E EI T+ H LV L+
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDA 222
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
D + ++YEFM G L + + + + ++ ++ +G+ ++HE +H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHL 279
Query: 150 DIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP NI+ K S K+ DFGL +P+ + T+ GT ++APE + P+
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE-VAEGKPVGY 335
Query: 208 KCDVYSFGMLLFEII 222
D++S G+L + ++
Sbjct: 336 YTDMWSVGVLSYILL 350
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 125
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 180
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 127
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 182
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 179
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 179
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+A+ H + R
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 179
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 39/269 (14%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL------KTCLNKRVEAQFMAEIGTIGRTYHINLV 84
LG G F VY+ + G+++A K++ K + +RV+ E+ + H +++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN----EVKIHCQLKHPSIL 74
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
LY + D LV E NG +++YL + + G+ YLH +
Sbjct: 75 ELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SH 131
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
I+H D+ +N+LL + K+ADFGLA +L P H + GTP Y +PE R+
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRS- 187
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIE 262
+ DV+S G + + +IGR D +TL+ K V +YE + IE
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KVVLADYEMPSFLS------IE 238
Query: 263 END-------REEAERMSMVALWCVQDCP 284
D R A+R+S L V D P
Sbjct: 239 AKDLIHQLLRRNPADRLS---LSSVLDHP 264
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEA--QFMAEIGTIGRTYHINLVRLY 87
KLG GG VY + +K+A K + ++ E +F E+ + H N+V +
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 88 GFCYDQTKAALVYEFMENGSLDKY------LFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
+ LV E++E +L +Y L DT + ++LD GI + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD-------GIKHAHD- 129
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
RI+H DIKP NIL+D+ + K+ DFG+AK + E + T+ GT Y +PE
Sbjct: 130 --MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPE--QA 184
Query: 202 NYPITQKC-DVYSFGMLLFEII 222
T +C D+YS G++L+E++
Sbjct: 185 KGEATDECTDIYSIGIVLYEML 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + + +A K+L KT L K VE Q E+ H N++RLYG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ +D T+ L+ E+ G++ + L ++ A ++Y H ++R+IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH---SKRVIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LL + K+ADFG + + P + + GT Y PE ++ +K
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MIEGRMHDEK 190
Query: 209 CDVYSFGMLLFEII 222
D++S G+L +E +
Sbjct: 191 VDLWSLGVLCYEFL 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+EF+ D F D L L I +G+++ H + R
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH---SHR 123
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 178
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQ------FMAEIGTIGRTYHINLVR 85
LG G F VYK + N +I A I K L R EA+ + EI + H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVA-IKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
L ++ +LV++FME L+ + ++ VL + + T +G+ YLH+
Sbjct: 77 LLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--- 132
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPEN---THDSTSGYRGTPGYSAPEFLLRN 202
I+H D+KP N+LLD K+ADFGLAK N H + + Y APE L
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-----YRAPELLFGA 187
Query: 203 YPITQKCDVYSFGMLLFEIIGR 224
D+++ G +L E++ R
Sbjct: 188 RMYGVGVDMWAVGCILAELLLR 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK + + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 65
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 123
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ ++ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKI-LKTCLNKRVEAQFMA---EIGTIGRTYHINLVRL 86
LG+G FG V+KG + P G I + +K +K F A + IG H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV +++ GSL ++ L + LL+ + A+G+ YL E +
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---M 154
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPI 205
+H ++ N+LL + +VADFG+A L P++ S + + A E + Y
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY-- 212
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
T + DV+S+G+ ++E++ A+ + L P D EKGE A+ C I+
Sbjct: 213 THQSDVWSYGVTVWELM--TFGAEPYAGLRLAEVP----DLLEKGERLAQPQICTID--- 263
Query: 266 REEAERMSMVALWCVQD 282
M MV W + +
Sbjct: 264 ----VYMVMVKCWMIDE 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 151
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 152 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 204
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFL 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 89
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 142
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 143 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 195
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFL 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + N I A K+L K L K VE Q E+ H N++RLYG
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHEECN 143
+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH---S 126
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+++IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC---GTLDYLPPE-MIEGR 181
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+K D++S G+L +E ++G+ + DT
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 103
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 161
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 70
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 128
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 64
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 122
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 87
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 205 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 239
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKI-LKTCLNKRVEAQFMA---EIGTIGRTYHINLVRL 86
LG+G FG V+KG + P G I + +K +K F A + IG H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C + LV +++ GSL ++ L + LL+ + A+G+ YL E +
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---M 136
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPI 205
+H ++ N+LL + +VADFG+A L P++ S + + A E + Y
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY-- 194
Query: 206 TQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCGIEEND 265
T + DV+S+G+ ++E++ A+ + L P D EKGE A+ C I+
Sbjct: 195 THQSDVWSYGVTVWELM--TFGAEPYAGLRLAEVP----DLLEKGERLAQPQICTIDVY- 247
Query: 266 REEAERMSMVALWCVQD 282
M MV W + +
Sbjct: 248 ------MVMVKCWMIDE 258
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 146
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 264 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 298
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 67
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 125
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 92
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 210 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 89
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ E+ G+L +YL E + ++ L+
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 207 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 241
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 183
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFL 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 181
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFL 203
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG V++G++ G ++A KI + R E + E I +T + + GF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFRE-AEIYQTVMLRHENILGFIA 90
Query: 92 DQ-------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
T+ LV ++ E+GSL YL T + E ++ +A+ TA G+A+LH E
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLAHLHMEIVG 148
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ + +AD GLA + + +T D +R GT Y APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 198 FL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
L ++++ ++ D+Y+ G++ +EI R
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + D GT Y PE ++
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE-MI 183
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFL 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 126
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + D GT Y PE ++
Sbjct: 127 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE-MI 179
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFL 201
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G+ G K+A KIL + + V + EI + H ++++LY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE-KLLDIAIGTARGIAYLHEECNQRII 147
T +V E++ G L Y+ V + E + L I +A + Y H ++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCHRHM---VV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
H D+KP N+LLDA +AK+ADFGL+ + + ++ G+P Y+APE +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYAGP 190
Query: 208 KCDVYSFGMLLFEII 222
+ D++S G++L+ ++
Sbjct: 191 EVDIWSCGVILYALL 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 75
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ EF+ GSL +YL E + KLL +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 188
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 189 PESLTES-KFSVASDVWSFGVVLYEL 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 178
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + D GT Y PE ++
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE-MI 178
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFL 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+LL+ K+ DFGLA++ +P++ H + Y T Y APE +L + T+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G+ G K+A KIL + + V + EI + H ++++LY
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE--KLLDIAIGTARGIAYLHEECNQRI 146
+ +V E++ G L Y+ + + + E +L + G+ Y H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS---GVDYCHRHM---V 137
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
+H D+KP N+LLDA +AK+ADFGL+ + + + G+P Y+APE +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVISGRLYAG 194
Query: 207 QKCDVYSFGMLLFEII 222
+ D++S G++L+ ++
Sbjct: 195 PEVDIWSSGVILYALL 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + I A K+L K L K VE Q E+ H N++RLYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHEECN 143
+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH---S 126
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+R+IH DIKP N+LL + K+ADFG + D GT Y PE ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE-MIEGR 181
Query: 204 PITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 MHDEKVDLWSLGVLCYEFL 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 181
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFL 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 34/205 (16%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 127
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPE 197
++R+IH DIKP N+LL + K+ADFG + H +S GT Y PE
Sbjct: 128 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPE 178
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
++ +K D++S G+L +E +
Sbjct: 179 -MIEGRMHDEKVDLWSLGVLCYEFL 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 27/198 (13%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTC--LNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+LG+G FGVV++ + G AK + T L+K EI + + +H L+ L+
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLH 114
Query: 88 GFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
D+ + L+ EF+ G L + Y ++ EV+ + + G+ ++HE
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR------QACEGLKHMHEH 168
Query: 142 CNQRIIHYDIKPANILLDAK--FSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
I+H DIKP NI+ + K S K+ DFGLA NP+ T+ T ++APE +
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIV 222
Query: 200 LRNYPITQKCDVYSFGML 217
R P+ D+++ G+L
Sbjct: 223 DRE-PVGFYTDMWAIGVL 239
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 32 LGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V + G +A K LK + + + EI + YH ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 87 YGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C DQ + +L V E++ GSL YL + + +LL A G+AYLH +Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
IH ++ N+LLD K+ DFGLAK + + +P + APE L+ Y
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEY 195
Query: 204 PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLD 237
DV+SFG+ L+E++ ++Q + L+
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 129
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 130 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 182
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC---GTLDYLPPE-MI 181
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 124
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 125 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 177
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFL 199
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V ++A K + ++ + + EI + R H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T A+ VY + D Y ++ L + + RG+ Y+H + ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPITQ 207
D+KP+N+L++ K+ DFGLA++ +PE+ H + T Y APE +L + T+
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 208 KCDVYSFGMLLFEIIGRR 225
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVV-YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G+V + G ++A K + +R E F E+ + +H N+V +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSS 110
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V EF+E G+L + T T + E++ + + R ++YLH NQ +IH
Sbjct: 111 YLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCLSVLRALSYLH---NQGVIHR 165
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
DIK +ILL + K++DFG + E GTP + APE + R P +
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKXLVGTPYWMAPEVISR-LPYGTEV 222
Query: 210 DVYSFGMLLFEII 222
D++S G+++ E+I
Sbjct: 223 DIWSLGIMVIEMI 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + GT Y PE ++
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELC---GTLDYLPPE-MI 178
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE +
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-XI 183
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFL 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 23 SFTNNYST--KLGAGGFGVVYK-GQFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRT 78
S T+ Y +LG G F VV + + P G + AAKI+ T L+ R + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H N+VRL+ ++ LV++ + G L F D ++ D + + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESV 116
Query: 139 HEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSA 195
+ I+H D+KP N+LL +K + K+ADFGLA + + G+ GTPGY +
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEII---------GRRKNAQDCSSDTLDWFPKQVWDE 246
PE +LR P + D+++ G++L+ ++ + + Q + D FP WD
Sbjct: 175 PE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-FPSPEWDT 232
Query: 247 Y--EKGELAAKVL 257
E +L K+L
Sbjct: 233 VTPEAKDLINKML 245
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 230 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 273
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 48/296 (16%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG V K +A K+LK + ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYL-----------------------FTDTEVLKWE 122
LYG C L+ E+ + GSL +L D L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
L+ A ++G+ YL E +++H D+ NIL+ K++DFGL++ E+++
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
S R + A E L ++ T + DV+SFG+LL+EI+ N P++
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PER 260
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+++ + G + C +E M + L C + P+ RP + + K LE
Sbjct: 261 LFNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 216 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 259
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+E + D F D L L I +G+A+ H + R
Sbjct: 69 VIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ + TH+ + + Y APE LL
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGC 177
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC---GTLDYLPPE-MI 178
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 23 SFTNNYS--TKLGAGGFGVVYK-GQFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRT 78
S T+ Y +LG G F VV + + P G + AAKI+ T L+ R + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H N+VRL+ ++ LV++ + G L F D ++ D + + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESV 116
Query: 139 HEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSA 195
+ I+H D+KP N+LL +K + K+ADFGLA + + G+ GTPGY +
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEII 222
PE +LR P + D+++ G++L+ ++
Sbjct: 175 PE-VLRKDPYGKPVDMWACGVILYILL 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ + G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G K+A KI+ K ++ + EI + H ++++LY
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ + +V E+ N D + D + + I +A + Y H +I+H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEYCHR---HKIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP N+LLD + K+ADFGL+ + N ++ G+P Y+APE + +
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPE 193
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTL 236
DV+S G++L+ ++ RR D S L
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDDESIPVL 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR----GTPGYSAPEFLLRNYP 204
D+KP+N+LL+ K+ DFGLA++ +P++ H +G+ T Y APE +L +
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDH---TGFLXEXVATRWYRAPEIMLNSKG 208
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
T+ D++S G +L E++ R
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G G +G+V N V++A K + ++ + + EI + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
T + VY + D Y T+ L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 152
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR----GTPGYSAPEFLLRNYP 204
D+KP+N+LL+ K+ DFGLA++ +P++ H +G+ T Y APE +L +
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDH---TGFLXEXVATRWYRAPEIMLNSKG 209
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
T+ D++S G +L E++ R
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 150 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 207 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 250
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 251 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 31 KLGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G + VYKG+ +A K ++ + + E+ + H N+V L+
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ + LV+E+++ L +YL ++ + RG+AY H Q+++H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCN-PENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP N+L++ + K+ADFGLA+ + P T+D+ T Y P+ LL + + +
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV---VTLWYRPPDILLGSTDYSTQ 181
Query: 209 CDVYSFGMLLFEIIGRR 225
D++ G + +E+ R
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 35/210 (16%)
Query: 31 KLGAGGFGVVYKGQFPNG-VKIAAKILKTCL---------NKRVEA---QFMAEIGTIGR 77
KLG+G +G V + NG + A K++K NK +E + EI +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 78 TYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTA 132
H N+++L+ D+ LV EF E G L +++ F + + +I
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA------NIMKQIL 156
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRG 189
GI YLH+ I+H DIKP NILL+ K + K+ DFGL+ + + G
Sbjct: 157 SGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLG 210
Query: 190 TPGYSAPEFLLRNYPITQKCDVYSFGMLLF 219
T Y APE L + Y +KCDV+S G++++
Sbjct: 211 TAYYIAPEVLKKKY--NEKCDVWSCGVIMY 238
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G K+A KI+ K ++ + EI + H ++++LY
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ + +V E+ N D + D + + I +A + Y H +I+H
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEYCHR---HKIVH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP N+LLD + K+ADFGL+ + N ++ G+P Y+APE + +
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPE 192
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTL 236
DV+S G++L+ ++ RR D S L
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDDESIPVL 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 32 LGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V + G +A K LK + + + EI + YH ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 87 YGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C DQ + +L V E++ GSL YL + + +LL A G+AYLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHA---Q 136
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
IH ++ N+LLD K+ DFGLAK + + +P + APE L+ Y
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEY 195
Query: 204 PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLD 237
DV+SFG+ L+E++ ++Q + L+
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + +A K+L K L K VE Q E+ H N++RLYG
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHEECN 143
+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+R+IH DIKP N+LL + K+ADFG + + P + + GT Y PE ++
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPE-MIEGR 178
Query: 204 PITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 MHDEKVDLWSLGVLCYEFL 197
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 KLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVVYK + V KI + V + + EI + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA---IGTARGIAYLHEECNQR 145
+ + K LV+E ++ D F D L L I +G+A+ H + R
Sbjct: 73 VIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENT--HDSTSGYRGTPGYSAPEFLLRN 202
++H D+KP N+L++ + + K+ADFGLA+ P T H+ + + Y APE LL
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G + E++ RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 175 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 232 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 275
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 276 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 230 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 273
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G K+A KI+ K ++ + EI + H ++++LY
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ + +V E+ N D + D + + I +A + Y H +I+H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEYCHR---HKIVH 130
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP N+LLD + K+ADFGL+ + N ++ G+P Y+APE + +
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPE 187
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTL 236
DV+S G++L+ ++ RR D S L
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDDESIPVL 215
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 216 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 259
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 165 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 222 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 265
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 266 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 24 FTNNYSTK---LGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTI 75
F Y K LG G FG V + G +A K LK + + + EI +
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 76 GRTYHINLVRLYGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR 133
YH ++++ G C D A+L V E++ GSL YL + + +LL A
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 145
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
G+AYLH Q IH D+ N+LLD K+ DFGLAK PE H+ YR
Sbjct: 146 GMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEG-HEX---YRVREDG 197
Query: 194 SAPEF-----LLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLD 237
+P F L+ Y DV+SFG+ L+E++ ++Q + L+
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 246
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 215 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 258
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 259 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG V G K+A KI+ K ++ + EI + H ++++LY
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ + +V E+ N D + D + + I +A + Y H +I+H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEYCHR---HKIVH 126
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+KP N+LLD + K+ADFGL+ + N ++ G+P Y+APE + +
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPE 183
Query: 209 CDVYSFGMLLFEIIGRRKNAQDCSSDTL 236
DV+S G++L+ ++ RR D S L
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDDESIPVL 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 34/205 (16%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPE 197
++R+IH DIKP N+LL + K+ADFG + H +S GT Y PE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPE 176
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
++ +K D++S G+L +E +
Sbjct: 177 -MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+ADFG + + P + GT Y PE ++
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLC---GTLDYLPPE-MI 178
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 215 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 258
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 259 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 34/205 (16%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPE 197
++R+IH DIKP N+LL + K+ADFG + H +S GT Y PE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPE 179
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
++ +K D++S G+L +E +
Sbjct: 180 -MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 230 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 273
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 32 LGAGGFGVVY--------KGQFPNGVKIAAKILKTCLNKRVEAQFMAEI---GTIGRTYH 80
LG G FG V K + V +A K+LK ++ + ++E+ IG+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 100
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLF---------------TDTEVLKWEKLL 125
N++ L G C ++ + G+L +YL E + ++ L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
ARG+ YL +Q+ IH D+ N+L+ K+ADFGLA+ N + + T+
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 186 GYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE L R Y T + DV+SFG+L++EI
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEI 252
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 111/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + P
Sbjct: 199 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 256 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 299
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 300 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 75
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 188
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 189 PESLTES-KFSVASDVWSFGVVLYEL 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 111/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + P
Sbjct: 176 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 233 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 276
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 277 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 216 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 259
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 34/282 (12%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY+GQ P+ +++A K L +++ E F+ E I + H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLF------TDTEVLKWEKLLDIAIGTARGIAYLH 139
G ++ E M G L +L + L LL +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 140 EECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
E IH DI N LL AK+ DFG+A+ + + + P
Sbjct: 185 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKV 256
E + T K D +SFG+LL+EI +L + P + E+ V
Sbjct: 242 EAFMEGI-FTSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEFV 285
Query: 257 LGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G + + + + C Q PE RP + +++ +E
Sbjct: 286 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 127
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+A+FG + + P + + GT Y PE ++
Sbjct: 128 --SKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 180
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFL 202
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 75
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 188
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 189 PESLTES-KFSVASDVWSFGVVLYEL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 77
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 190
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 191 PESLTES-KFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 79
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 192
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 193 PESLTES-KFSVASDVWSFGVVLYEL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 72
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 185
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 186 PESLTES-KFSVASDVWSFGVVLYEL 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 78
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 191
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 192 PESLTES-KFSVASDVWSFGVVLYEL 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 48/296 (16%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG V K +A K+LK + ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYL-----------------------FTDTEVLKWE 122
LYG C L+ E+ + GSL +L D L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
L+ A ++G+ YL E +++H D+ NIL+ K++DFGL++ E++
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
S R + A E L ++ T + DV+SFG+LL+EI+ N P++
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PER 260
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+++ + G + C +E M + L C + P+ RP + + K LE
Sbjct: 261 LFNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 76
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 189
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 190 PESLTES-KFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 70
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 183
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 184 PESLTES-KFSVASDVWSFGVVLYEL 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+LG G F VV + + G + AAKI+ T L+ R + E H N+VRL+
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGI-AYLHEECNQR-I 146
++ L+++ + G L F D ++ D + + + A LH C+Q +
Sbjct: 89 SISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLH--CHQMGV 142
Query: 147 IHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+H D+KP N+LL +K + K+ADFGLA E + G+ GTPGY +PE +LR
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPE-VLRKD 199
Query: 204 PITQKCDVYSFGMLLFEII---------GRRKNAQDCSSDTLDWFPKQVWD 245
P + D+++ G++L+ ++ + + Q + D FP WD
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-FPSPEWD 249
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G+P Y+APE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G+P Y+APE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 71
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 184
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 185 PESLTES-KFSVASDVWSFGVVLYEL 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 72
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 185
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 186 PESLTES-KFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 103
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 216
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 217 PESLTES-KFSVASDVWSFGVVLYEL 241
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 90
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 203
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 204 PESLTES-KFSVASDVWSFGVVLYEL 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY + +F +K+ + K L K VE Q E+ H N++R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKV---LFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGT-----ARGIAYLHE 140
LYG+ +D T+ L+ E+ G++ + E+ K K + T A ++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH- 128
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
++R+IH DIKP N+LL + K+A+FG + + P + + GT Y PE ++
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC---GTLDYLPPE-MI 181
Query: 201 RNYPITQKCDVYSFGMLLFEII 222
+K D++S G+L +E +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 90
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEXXKVKEPGESPIFWYA 203
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 204 PESLTES-KFSVASDVWSFGVVLYEL 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL-VRLYG 88
+LG G +GVV K + P+G +A K ++ +N + + + + ++ RT V YG
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 89 FCYDQTKAALVYEFMENGSLDKY---LFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + + E M+ SLDK+ + + + + L IA+ + + +LH + +
Sbjct: 74 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG--TPGYSAPEFLLRNY 203
+IH D+KP+N+L++A K+ DFG++ + D +G + P PE + Y
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 204 PITQKCDVYSFGMLLFEI 221
+ K D++S G+ + E+
Sbjct: 191 SV--KSDIWSLGITMIEL 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query: 30 TKLGAGGFGVVYKGQFPNGVK-IAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++LG G +VY+ + K A K+LK ++K++ EIG + R H N+++L
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI---VRTEIGVLLRLSHPNIIKLKE 115
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
T+ +LV E + G L +K +++ + D +AYLHE
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDA------ADAVKQILEAVAYLHE--- 166
Query: 144 QRIIHYDIKPANILL-----DAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF 198
I+H D+KP N+L DA K+ADFGL+K+ + + GTPGY APE
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEHQVLMKTVC---GTPGYCAPE- 220
Query: 199 LLRNYPITQKCDVYSFGMLLFEII 222
+LR + D++S G++ + ++
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILL 244
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 31 KLGAGGFGVVYKGQ-FPNGVKIAAKILKT--CLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
K+G G F VY+ +GV +A K ++ ++ + A + EI + + H N+++ Y
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL--FTDTEVLKWEKLL-DIAIGTARGIAYLHEECNQ 144
+ + +V E + G L + + F + L E+ + + + ++H ++
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SR 155
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYP 204
R++H DIKPAN+ + A K+ D GL + + + T + GTP Y +PE + N
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHEN-G 212
Query: 205 ITQKCDVYSFGMLLFEI 221
K D++S G LL+E+
Sbjct: 213 YNFKSDIWSLGCLLYEM 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 40/287 (13%)
Query: 31 KLGAGGFGVVYKGQFPN------GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
+LG G FG V+ + N + +A K LK + F E + H ++V
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIV 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTD-------------TEVLKWEKLLDIAIGT 131
+ YG C + +V+E+M++G L+K+L TE L ++L IA
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQI 137
Query: 132 ARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP 191
A G+ YL +Q +H D+ N L+ K+ DFG+++ + + G+ P
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLP 193
Query: 192 GYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGE 251
P + T + DV+S G++L+EI + KQ W + E
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT---------------YGKQPWYQLSNNE 238
Query: 252 LAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+ + + + R + + + L C Q P R + + +L+
Sbjct: 239 VIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G P Y+APE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 24 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEV---- 118
+ M+E+ + H N+V L G C ++ E+ G L +L E
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 119 -----LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK 173
L+ LL + A+G+A+L ++ IH D+ N+LL AK+ DFGLA+
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 174 LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
++ + R + APE + + T + DV+S+G+LL+EI
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEI 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEV---- 118
+ M+E+ + H N+V L G C ++ E+ G L +L E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 119 -----LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK 173
L+ LL + A+G+A+L ++ IH D+ N+LL AK+ DFGLA+
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 174 LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
++ + R + APE + + T + DV+S+G+LL+EI
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIF 256
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 28/231 (12%)
Query: 8 IAREKPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEA 66
I+ E+ FT E L ++G G +G V K P+G +A K +++ ++++ +
Sbjct: 11 ISPEQHWDFTAEDLKDLG-----EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK 65
Query: 67 QFMAEIGTIGRTYHIN-LVRLYGFCYDQTKAALVYEFMENGSLDK---YLFTD-TEVLKW 121
Q + ++ + R+ +V+ YG + + + E M + S DK Y+++ +V+
Sbjct: 66 QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPE 124
Query: 122 EKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTH 181
E L I + T + + +L E N +IIH DIKP+NILLD + K+ DFG++
Sbjct: 125 EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISG-----QLV 177
Query: 182 DSTSGYR--GTPGYSAPEFL-----LRNYPITQKCDVYSFGMLLFEIIGRR 225
DS + R G Y APE + + Y + + DV+S G+ L+E+ R
Sbjct: 178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDV--RSDVWSLGITLYELATGR 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A +I+ KT LN + E+ + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G+P Y+APE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 79
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + ++ +G G
Sbjct: 140 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIXETDXXRKGGKGLL 191
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 192 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 235
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P+ RP +V +L+ + P
Sbjct: 236 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 295
Query: 310 F 310
F
Sbjct: 296 F 296
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 48/296 (16%)
Query: 32 LGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG V K +A K+LK + ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYL-----------------------FTDTEVLKWE 122
LYG C L+ E+ + GSL +L D L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
L+ A ++G+ YL E ++H D+ NIL+ K++DFGL++ E++
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQ 242
S R + A E L ++ T + DV+SFG+LL+EI+ N P++
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PER 260
Query: 243 VWDEYEKGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
+++ + G + C +E M + L C + P+ RP + + K LE
Sbjct: 261 LFNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL W K + A R I + C+Q+ I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHG----WMKEKE-ARAKFRQIVSAVQYCHQKFIVH 129
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G+P Y+APE +
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 186
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 187 VDVWSLGVILYTLV 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 25/230 (10%)
Query: 21 LCSFTNNYS--TKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGR 77
LC Y ++G G +G V+K + NG + A + + + E ++ I +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVA-LKRVRVQTGEEGMPLSTIREVAV 64
Query: 78 TYHI------NLVRLYGFCY-----DQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLL 125
H+ N+VRL+ C +TK LV+E ++ L YL E + E +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
D+ RG+ +LH + R++H D+KP NIL+ + K+ADFGLA++ + + S
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
T Y APE LL++ T D++S G + E+ RRK SSD
Sbjct: 181 ---VTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 25/230 (10%)
Query: 21 LCSFTNNYS--TKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGR 77
LC Y ++G G +G V+K + NG + A + + + E ++ I +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVA-LKRVRVQTGEEGMPLSTIREVAV 64
Query: 78 TYHI------NLVRLYGFCY-----DQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLL 125
H+ N+VRL+ C +TK LV+E ++ L YL E + E +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
D+ RG+ +LH + R++H D+KP NIL+ + K+ADFGLA++ + + S
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
T Y APE LL++ T D++S G + E+ RRK SSD
Sbjct: 181 ---VTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ-RIIH 148
+ L+ E+ G + YL + + E A R I + C+Q RI+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-----ARSKFRQIVSAVQYCHQKRIVH 134
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N + G+P Y+APE +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 192 VDVWSLGVILYTLV 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + ++ +G G
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIXETDXXRKGGKGLL 194
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P+ RP +V +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 298
Query: 310 F 310
F
Sbjct: 299 F 299
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 32/223 (14%)
Query: 17 TLEQLCSFTNNYS-----------TKLGAGGFGVVYKGQFPNGVK--IAAKILKTCLNKR 63
++ L F N +S ++G G FG VYKG N K +A KI+ +
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAED 59
Query: 64 VEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEK 123
EI + + + R +G TK ++ E++ GS ++LK
Sbjct: 60 EIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA-------LDLLKPGP 112
Query: 124 LLDIAIGTA-----RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE 178
L + I T +G+ YLH E R IH DIK AN+LL + K+ADFG+A
Sbjct: 113 LEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-- 167
Query: 179 NTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+T + + GTP + APE +++ K D++S G+ E+
Sbjct: 168 DTQIKRNXFVGTPFWMAPE-VIKQSAYDFKADIWSLGITAIEL 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ-RIIH 148
+ L+ E+ G + YL + + E A R I + C+Q RI+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-----ARSKFRQIVSAVQYCHQKRIVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N + G P Y+APE +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 195 VDVWSLGVILYTLV 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 31 KLGAGGFGVVYKGQF---PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+LG G FG V +G + + +A K+LK K + M E + + + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G C + LV E G L K+L E + + ++ + G+ YL E + +
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFV 132
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFL-LRNYPI 205
H D+ N+LL + AK++DFGL+K ++++ + P + APE + R +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF-- 190
Query: 206 TQKCDVYSFGMLLFEII 222
+ + DV+S+G+ ++E +
Sbjct: 191 SSRSDVWSYGVTMWEAL 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
+ M+E+ + H N+V L G C ++ E+ G L +L + VL+ +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 123 KLLDIAIGTA-------------RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADF 169
IA TA +G+A+L ++ IH D+ N+LL AK+ DF
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 170 GLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
GLA+ ++ + R + APE + + T + DV+S+G+LL+EI
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEI 259
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLL 194
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P+ RP +V +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 298
Query: 310 F 310
F
Sbjct: 299 F 299
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 21 LCSFTNNYS--TKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGR 77
LC Y ++G G +G V+K + NG + A + + + E ++ I +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVA-LKRVRVQTGEEGMPLSTIREVAV 64
Query: 78 TYHI------NLVRLYGFCY-----DQTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLL 125
H+ N+VRL+ C +TK LV+E ++ L YL E + E +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 126 DIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTS 185
D+ RG+ +LH + R++H D+KP NIL+ + K+ADFGLA++ + + + +
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALT 177
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
T Y APE LL++ T D++S G + E+ RRK SSD
Sbjct: 178 SVVVTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + ++ +G G
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIXETDXXRKGGKGLL 194
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P RP +V +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 298
Query: 310 F 310
F
Sbjct: 299 F 299
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G +GVV P G +A K ++ + + EI + H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ VY E D + T++L + + T R + LH +IH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCN--------PENTHDSTSGYRGTPGYSAPEFLL 200
D+KP+N+L+++ KV DFGLA++ + P + Y T Y APE +L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVML 195
Query: 201 RNYPITQKCDVYSFGMLLFEIIGRR 225
+ ++ DV+S G +L E+ RR
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A +I+ KT LN + E+ + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D + G+P Y+APE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE---FCGSPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ + H N+V+L+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + + E A R I + C+Q+ I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKYIVH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLD + K+ADFG + N D+ + G+P Y+APE +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPE 194
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 195 VDVWSLGVILYTLV 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 26/239 (10%)
Query: 24 FTNNYST--KLGAGGFGVVYK--GQFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRT 78
FT++Y +LG G F VV + + P + AAKI+ T L+ R + E
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQ-EYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H N+VRL+ ++ LV++ + G L F D ++ D + + + +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESV 143
Query: 139 HEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSA 195
+ I+H D+KP N+LL +K + K+ADFGLA + + G+ GTPGY +
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLS 201
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEII---------GRRKNAQDCSSDTLDWFPKQVWD 245
PE +LR P + D+++ G++L+ ++ + K Q + D FP WD
Sbjct: 202 PE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD-FPSPEWD 258
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETDYYRKGGKGLL 194
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P+ RP +V +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 298
Query: 310 F 310
F
Sbjct: 299 F 299
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
+ M+E+ + H N+V L G C ++ E+ G L +L + VL+ +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 123 KLLDIAIGT-------------ARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADF 169
IA T A+G+A+L ++ IH D+ N+LL AK+ DF
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 170 GLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
GLA+ ++ + R + APE + + T + DV+S+G+LL+EI
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEI 259
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTY---HINLVR 85
++G G +G VYK + P+ G +A K ++ + + + E+ + R H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 86 LYGFCYD-----QTKAALVYEFMENGSLDKYLFTDTEV-LKWEKLLDIAIGTARGIAYLH 139
L C + K LV+E ++ L YL L E + D+ RG+ +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
C I+H D+KP NIL+ + + K+ADFGLA++ + + D T Y APE L
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV---VTLWYRAPEVL 183
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
L++ T D++S G + E+ R+
Sbjct: 184 LQSTYAT-PVDMWSVGCIFAEMFRRK 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 72
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS-----A 195
+R IH D+ NIL++ + K+ DFGL K+ D PG S A
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEFFKVKEPGESPIFWYA 185
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEI 221
PE L + + DV+SFG++L+E+
Sbjct: 186 PESLTES-KFSVASDVWSFGVVLYEL 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
KLG G +G VYK +I A +K + + + EI + + ++V+ YG
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVA--IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ T +V E+ GS+ + + L +++ I T +G+ YLH R IH D
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRD 150
Query: 151 IKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC- 209
IK NILL+ + AK+ADFG+A + + GTP + APE + I C
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQE---IGYNCV 205
Query: 210 -DVYSFGMLLFEI 221
D++S G+ E+
Sbjct: 206 ADIWSLGITAIEM 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG GGFG V + + G ++A K + L+ + ++ EI + + H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 90 CYDQTKAA------LVYEFMENGSLDKYL--FTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
K A L E+ E G L KYL F + LK + + + + YLHE
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 139
Query: 142 CNQRIIHYDIKPANILLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF 198
RIIH D+KP NI+L + K+ D G AK + + + + GT Y APE
Sbjct: 140 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPEL 194
Query: 199 L-LRNYPITQKCDVYSFGMLLFEII 222
L + Y +T D +SFG L FE I
Sbjct: 195 LEQKKYTVT--VDYWSFGTLAFECI 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+LG GGFG V + + G ++A K + L+ + ++ EI + + H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 90 CYDQTKAA------LVYEFMENGSLDKYL--FTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
K A L E+ E G L KYL F + LK + + + + YLHE
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 140
Query: 142 CNQRIIHYDIKPANILLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF 198
RIIH D+KP NI+L + K+ D G AK + + + + GT Y APE
Sbjct: 141 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPEL 195
Query: 199 L-LRNYPITQKCDVYSFGMLLFEII 222
L + Y +T D +SFG L FE I
Sbjct: 196 LEQKKYTVT--VDYWSFGTLAFECI 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 81
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 142 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETDYYRKGGKGLL 193
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 194 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 237
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P+ RP +V +L+ + P
Sbjct: 238 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 297
Query: 310 F 310
F
Sbjct: 298 F 298
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 15 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 74
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + ++ +G G
Sbjct: 135 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIXETDXXRKGGKGL 186
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 187 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL-VRLYG 88
+LG G +GVV K P+G +A K ++ +N + + + + ++ RT V YG
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 89 FCYDQTKAALVYEFMENGSLDKY---LFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + + E M+ SLDK+ + + + + L IA+ + + +LH + +
Sbjct: 118 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAK--LCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+IH D+KP+N+L++A K+ DFG++ + + T D+ P PE + Y
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 204 PITQKCDVYSFGMLLFEI 221
+ K D++S G+ + E+
Sbjct: 235 SV--KSDIWSLGITMIEL 250
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 28 YSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
+ +LG G FG V ++ G +A K L+ + + F EI + H N
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDN 73
Query: 83 LVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
+V+ G CY + L+ E++ GSL YL E + KLL +G+ YL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFL 199
+R IH ++ NIL++ + K+ DFGL K+ + + +P + APE L
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 200 LRNYPITQKCDVYSFGMLLFEI 221
+ + DV+SFG++L+E+
Sbjct: 191 TES-KFSVASDVWSFGVVLYEL 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRV-------EAQFMAEIGTIGRTYHINL 83
LG G FG V+ + NG A K+LK + R+ + + M I T H +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-----HPFI 68
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
+R++G D + ++ +++E G L L ++ A + YLH +
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYAAEVCLALEYLH---S 124
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ II+ D+KP NILLD K+ DFG AK D T GTP Y APE ++
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPE-VVSTK 178
Query: 204 PITQKCDVYSFGMLLFEIIG 223
P + D +SFG+L++E++
Sbjct: 179 PYNKSIDWWSFGILIYEMLA 198
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + ++ +G G
Sbjct: 144 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIXETDXXRKGGKGL 195
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 196 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKI--LKTCLNKRVEAQFMAEIGTIGRT-YHINLVRLY 87
+G G FG V K + +G+++ A I +K +K F E+ + + +H N++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 88 GFCYDQTKAALVYEFMENGSL------DKYLFTD---------TEVLKWEKLLDIAIGTA 132
G C + L E+ +G+L + L TD L ++LL A A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG 192
RG+ YL + ++ IH D+ NIL+ + AK+ADFGL++ E T G R
Sbjct: 143 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG-RLPVR 196
Query: 193 YSAPEFLLRNYPI-TQKCDVYSFGMLLFEII 222
+ A E L NY + T DV+S+G+LL+EI+
Sbjct: 197 WMAIESL--NYSVYTTNSDVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKI--LKTCLNKRVEAQFMAEIGTIGRT-YHINLVRLY 87
+G G FG V K + +G+++ A I +K +K F E+ + + +H N++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 88 GFCYDQTKAALVYEFMENGSL------DKYLFTD---------TEVLKWEKLLDIAIGTA 132
G C + L E+ +G+L + L TD L ++LL A A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG 192
RG+ YL + ++ IH D+ NIL+ + AK+ADFGL++ E T G R
Sbjct: 153 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG-RLPVR 206
Query: 193 YSAPEFLLRNYPI-TQKCDVYSFGMLLFEII 222
+ A E L NY + T DV+S+G+LL+EI+
Sbjct: 207 WMAIESL--NYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + N +A K+L K+ L K VE Q EI H N++R+Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ +D+ + L+ EF G L K L ++ A + Y HE +++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHE---RKVIH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPEFLLRNYPI 205
DIKP N+L+ K K+ADFG + H + R GT Y PE ++
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPE-MIEGKTH 189
Query: 206 TQKCDVYSFGMLLFEII 222
+K D++ G+L +E +
Sbjct: 190 DEKVDLWCAGVLCYEFL 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + N +A K+L K+ L K VE Q EI H N++R+Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ +D+ + L+ EF G L K L ++ A + Y HE +++IH
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHE---RKVIH 138
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPEFLLRNYPI 205
DIKP N+L+ K K+ADFG + H + R GT Y PE ++
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPE-MIEGKTH 190
Query: 206 TQKCDVYSFGMLLFEII 222
+K D++ G+L +E +
Sbjct: 191 DEKVDLWCAGVLCYEFL 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 20 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 140 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 191
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 192 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRL 86
LG G FG V +G +K+A K +K + + E + F++E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 87 YGFCYDQT-----KAALVYEFMENGSLDKYLF-----TDTEVLKWEKLLDIAIGTARGIA 136
G C + + K ++ FM+ G L YL T + + + LL + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YL N+ +H D+ N +L + VADFGL+K + + + + A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 197 EFLL-RNYPITQKCDVYSFGMLLFEIIGR 224
E L R Y T K DV++FG+ ++EI R
Sbjct: 219 ESLADRVY--TSKSDVWAFGVTMWEIATR 245
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKIL-KTCLNKR-VEAQFMAEIGTIGRTYHINLVRLYG 88
LG G FG VY + N +A K+L K+ L K VE Q EI H N++R+Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ +D+ + L+ EF G L K L ++ A + Y HE +++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHE---RKVIH 137
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR---GTPGYSAPEFLLRNYPI 205
DIKP N+L+ K K+ADFG + H + R GT Y PE ++
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPE-MIEGKTH 189
Query: 206 TQKCDVYSFGMLLFEII 222
+K D++ G+L +E +
Sbjct: 190 DEKVDLWCAGVLCYEFL 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 150 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 201
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 202 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 137 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 188
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 189 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 30/254 (11%)
Query: 24 FTNNYST--KLGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTY 79
FT Y +LG G F VV + + G + AA I+ T L+ R + E
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGI-AYL 138
H N+VRL+ ++ L+++ + G L F D ++ D + + + A L
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVL 124
Query: 139 HEECNQR-IIHYDIKPANILLDAKF---SAKVADFGLAKLCNPENTHDSTSGYRGTPGYS 194
H C+Q ++H ++KP N+LL +K + K+ADFGLA E + G+ GTPGY
Sbjct: 125 H--CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYL 180
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEII---------GRRKNAQDCSSDTLDWFPKQVWD 245
+PE +LR P + D+++ G++L+ ++ + + Q + D FP WD
Sbjct: 181 SPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-FPSPEWD 238
Query: 246 EY--EKGELAAKVL 257
E +L K+L
Sbjct: 239 TVTPEAKDLINKML 252
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVK-IAAKILKTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYGF 89
LG G F + K + A KI+ +KR+EA EI + H N+V+L+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII----SKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 90 CYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
+DQ LV E + G L K F++TE + L A+ +
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG-------- 126
Query: 145 RIIHYDIKPANILL---DAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
++H D+KP N+L + K+ DFG A+L P+N T + T Y+APE L +
Sbjct: 127 -VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQ 183
Query: 202 NYPITQKCDVYSFGMLLFEIIG 223
N + CD++S G++L+ ++
Sbjct: 184 N-GYDESCDLWSLGVILYTMLS 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 32 LGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V + G +A K LK ++ + + EI + YH ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 87 YGFCYDQTKAA--LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C DQ + + LV E++ GSL YL + +LL A G+AYLH Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 131
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
IH + N+LLD K+ DFGLAK + + +P + APE L+
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEC 190
Query: 204 PITQKCDVYSFGMLLFEII 222
DV+SFG+ L+E++
Sbjct: 191 KFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 32 LGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V + G +A K LK ++ + + EI + YH ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 87 YGFCYDQTKAA--LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
G C DQ + + LV E++ GSL YL + +LL A G+AYLH Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 130
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEFLLRNY 203
IH + N+LLD K+ DFGLAK + + +P + APE L+
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEC 189
Query: 204 PITQKCDVYSFGMLLFEII 222
DV+SFG+ L+E++
Sbjct: 190 KFYYASDVWSFGVTLYELL 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 143 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 194
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 195 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G FG V+KG K+ A KI+ + EI + + + + YG
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 90 CYDQTKAALVYEFMENGS-LDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
TK ++ E++ GS LD + L ++ I +G+ YLH E + IH
Sbjct: 89 YLKDTKLWIIMEYLGGGSALD---LLEPGPLDETQIATILREILKGLDYLHSE---KKIH 142
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIK AN+LL K+ADFG+A +T + + GTP + APE +++ K
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPE-VIKQSAYDSK 199
Query: 209 CDVYSFGMLLFEI 221
D++S G+ E+
Sbjct: 200 ADIWSLGITAIEL 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLYGF 89
+G G +GVV + G ++A K + + A+ + E+ + H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 90 C-----YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
Y + K+ V + L + + + ++ L E + RG+ Y+H +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH---SA 178
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDS-TSGYRGTPGYSAPEFLLRN 202
++IH D+KP+N+L++ K+ DFG+A+ LC H + Y T Y APE +L
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 203 YPITQKCDVYSFGMLLFEIIGRRK 226
+ TQ D++S G + E++ RR+
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 150 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 201
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 202 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 28 YSTKLGAGGFGVVY-KGQFPNGVKIAAKILKTCLNKRVEA---QFMAEIGTIGRTYHINL 83
+ KLG+G FG V+ + +G++ +++KT R + Q AEI + H N+
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLE---RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDT---EVLKWEKLLDIAIGTARGIAYLHE 140
++++ D +V E E G L + + + + L + ++ +AY H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH- 141
Query: 141 ECNQRIIHYDIKPANILLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
+Q ++H D+KP NIL K+ DFGLA+L + + ++ GT Y APE
Sbjct: 142 --SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTNAAGTALYMAPE 196
Query: 198 FLLRNYPITQKCDVYSFGMLLF 219
R+ +T KCD++S G++++
Sbjct: 197 VFKRD--VTFKCDIWSAGVVMY 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G FG V+KG K+ A KI+ + EI + + + + YG
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 90 CYDQTKAALVYEFMENGS-LDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
TK ++ E++ GS LD + L ++ I +G+ YLH E + IH
Sbjct: 74 YLKDTKLWIIMEYLGGGSALD---LLEPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIK AN+LL K+ADFG+A +T + + GTP + APE +++ K
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE-VIKQSAYDSK 184
Query: 209 CDVYSFGMLLFEI 221
D++S G+ E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 21 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 141 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 192
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 193 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLFEIIG 223
NY P+ + D++S G++ + ++
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLS 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G F V + G ++A KI+ KT LN + E+ H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR-IIH 148
+ LV E+ G + YL + E A R I + C+Q+ I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+LLDA + K+ADFG + N D+ + G P Y+APE +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPE 193
Query: 209 CDVYSFGMLLFEII 222
DV+S G++L+ ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 27 NYSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
Y ++LG G FG V ++ G +A K L+ + F EI + +
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 68
Query: 82 NLVRLYGFCYD--QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
+V+ G Y + + LV E++ +G L +L L +LL + +G+ YL
Sbjct: 69 FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS----- 194
++R +H D+ NIL++++ K+ADFGLAKL D PG S
Sbjct: 129 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL----PLDKDXXVVREPGQSPIFWY 181
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L N +++ DV+SFG++L+E+
Sbjct: 182 APESLSDNI-FSRQSDVWSFGVVLYELF 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 29/205 (14%)
Query: 31 KLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
KLG+G +G V+ G + A KI+K + + E+ + + H N+++LY
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAI---GTARGIAYLHEECNQ 144
F D+ LV E G L F + + + +D A+ G YLH+
Sbjct: 71 EFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---H 123
Query: 145 RIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR----GTPGYSAPE 197
I+H D+KP N+LL++K K+ DFGL+ H G GT Y APE
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPE 176
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L + Y +KCDV+S G++L+ ++
Sbjct: 177 VLRKKYD--EKCDVWSCGVILYILL 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 143 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 194
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 195 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G FG V+KG K+ A KI+ + EI + + + + YG
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 90 CYDQTKAALVYEFMENGS-LDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
TK ++ E++ GS LD + L ++ I +G+ YLH E + IH
Sbjct: 74 YLKDTKLWIIMEYLGGGSALD---LLEPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIK AN+LL K+ADFG+A +T + + GTP + APE +++ K
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPE-VIKQSAYDSK 184
Query: 209 CDVYSFGMLLFEI 221
D++S G+ E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 144 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 195
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 196 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 27 NYSTKLGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-Y 79
N LG G FG V + + +A K+LK M+E+ + +
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 80 HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTD-----------TEVLKWEKLLDI 127
H+N+V L G C +V EF + G+L YL + + L E L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 128 AIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGY 187
+ A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 188 RGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 207 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 23 SFTNNYST--KLGAGGFGVVYKG-QFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRT 78
S T+ Y +G G F VV + + G + AAKI+ T L+ R + E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGI-AY 137
H N+VRL+ ++ LV++ + G L F D ++ D + + + A
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAV 116
Query: 138 LHEECNQR-IIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
LH C+Q ++H D+KP N+LL +K + K+ADFGLA + + G+ GTPGY
Sbjct: 117 LH--CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII---------GRRKNAQDCSSDTLDWFPKQVW 244
+PE +LR + D+++ G++L+ ++ + K Q + D FP W
Sbjct: 173 LSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD-FPSPEW 230
Query: 245 D 245
D
Sbjct: 231 D 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G FG V+KG K+ A KI+ + EI + + + + YG
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 90 CYDQTKAALVYEFMENGS-LDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
TK ++ E++ GS LD + L ++ I +G+ YLH E + IH
Sbjct: 94 YLKDTKLWIIMEYLGGGSALD---LLEPGPLDETQIATILREILKGLDYLHSE---KKIH 147
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIK AN+LL K+ADFG+A +T + + GTP + APE +++ K
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE-VIKQSAYDSK 204
Query: 209 CDVYSFGMLLFEI 221
D++S G+ E+
Sbjct: 205 ADIWSLGITAIEL 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKR-----VEAQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLFEIIG 223
PE + NY P+ + D++S G++ + ++
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLS 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 29/205 (14%)
Query: 31 KLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
KLG+G +G V+ G + A KI+K + + E+ + + H N+++LY
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAI---GTARGIAYLHEECNQ 144
F D+ LV E G L F + + + +D A+ G YLH+
Sbjct: 88 EFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---H 140
Query: 145 RIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR----GTPGYSAPE 197
I+H D+KP N+LL++K K+ DFGL+ H G GT Y APE
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPE 193
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L + Y +KCDV+S G++L+ ++
Sbjct: 194 VLRKKY--DEKCDVWSCGVILYILL 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTY---HINLVR 85
++G G +G VYK + P+ G +A K ++ + + + E+ + R H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 86 LYGFCYD-----QTKAALVYEFMENGSLDKYL-FTDTEVLKWEKLLDIAIGTARGIAYLH 139
L C + K LV+E ++ L YL L E + D+ RG+ +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
C I+H D+KP NIL+ + + K+ADFGLA++ + + + + T Y APE L
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALAPVVVTLWYRAPEVL 183
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
L++ T D++S G + E+ R+
Sbjct: 184 LQSTYAT-PVDMWSVGCIFAEMFRRK 208
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 83
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H ++ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 144 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR-----DIYETDYYRKGGKGLL 195
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 196 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 239
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P RP +V +L+ + P
Sbjct: 240 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 299
Query: 310 F 310
F
Sbjct: 300 F 300
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 31 KLGAGGFGVVYKGQF---PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+LG G FG V +G + + +A K+LK K + M E + + + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 88 GFCYDQTKA-ALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
G C Q +A LV E G L K+L E + + ++ + G+ YL E +
Sbjct: 403 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNF 457
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTP-GYSAPEFL-LRNYP 204
+H ++ N+LL + AK++DFGL+K ++++ + P + APE + R +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF- 516
Query: 205 ITQKCDVYSFGMLLFEII 222
+ + DV+S+G+ ++E +
Sbjct: 517 -SSRSDVWSYGVTMWEAL 533
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQF---MAEIGTIGRTYHINLVRLYG 88
LG GGFG V+ Q K+ A + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFT---DTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+T LV M G + +++ D + + + G+ +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-RNYP 204
II+ D+KP N+LLD + +++D GLA T T GY GTPG+ APE LL Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
+ D ++ G+ L+E+I R
Sbjct: 368 FS--VDYFALGVTLYEMIAAR 386
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLYGF 89
+G G +GVV + G ++A K + + A+ + E+ + H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 90 C-----YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
Y + K+ V + L + + + ++ L E + RG+ Y+H +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH---SA 177
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDS-TSGYRGTPGYSAPEFLLRN 202
++IH D+KP+N+L++ K+ DFG+A+ LC H + Y T Y APE +L
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 203 YPITQKCDVYSFGMLLFEIIGRRK 226
+ TQ D++S G + E++ RR+
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ A K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 190
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 89 FCY-DQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
FC+ D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH--- 154
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTE 213
Query: 203 YPITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 214 KSACKSSDLWALGCIIYQLVA 234
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 31 KLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTI-GRTYHINL 83
+LG G FG+VY+G + +K +A K + + R +F+ E + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLK---------WEKLLDIAIGTARG 134
VRL G +V E M +G L YL + + ++++ +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG-- 192
+AYL+ ++ +H ++ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 143 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR-----DIYETDYYRKGGKGLL 194
Query: 193 ---YSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEK 249
+ APE L++ T D++SFG++L+EI +Q +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 250 GELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAPPKP 309
++ V+ G + ER++ + C Q P RP +V +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 298
Query: 310 F 310
F
Sbjct: 299 F 299
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 27 NYSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
Y ++LG G FG V ++ G +A K L+ + F EI + +
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 71
Query: 82 NLVRLYGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
+V+ G Y + +L V E++ +G L +L L +LL + +G+ YL
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEF 198
++R +H D+ NIL++++ K+ADFGLAKL + + +P + APE
Sbjct: 132 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 199 LLRNYPITQKCDVYSFGMLLFEII 222
L N +++ DV+SFG++L+E+
Sbjct: 189 LSDNI-FSRQSDVWSFGVVLYELF 211
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N ++ F+ K+ DFG+ + + +++ +G G
Sbjct: 172 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 223
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 224 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQF---MAEIGTIGRTYHINLVRLYG 88
LG GGFG V+ Q K+ A + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFT---DTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+T LV M G + +++ D + + + G+ +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-RNYP 204
II+ D+KP N+LLD + +++D GLA T T GY GTPG+ APE LL Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
+ D ++ G+ L+E+I R
Sbjct: 368 FS--VDYFALGVTLYEMIAAR 386
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 32 LGAGGFGVV-----YKGQFPNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLV 84
LG G FG V YK Q +K ++ L K+ ++ RVE EI + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER----EISYLKLLRHPHII 72
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE--KLLDIAIGTARGIAYLHEEC 142
+LY T +V E+ G L Y+ + + E + I I Y H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIIC---AIEYCHR-- 126
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+I+H D+KP N+LLD + K+ADFGL+ + N ++ G+P Y+APE +
Sbjct: 127 -HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVINGK 182
Query: 203 YPITQKCDVYSFGMLLF-EIIGR 224
+ DV+S G++L+ ++GR
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 27 NYSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
Y ++LG G FG V ++ G +A K L+ + F EI + +
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 84
Query: 82 NLVRLYGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
+V+ G Y + +L V E++ +G L +L L +LL + +G+ YL
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEF 198
++R +H D+ NIL++++ K+ADFGLAKL + + +P + APE
Sbjct: 145 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 199 LLRNYPITQKCDVYSFGMLLFEII 222
L N +++ DV+SFG++L+E+
Sbjct: 202 LSDNI-FSRQSDVWSFGVVLYELF 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQF---MAEIGTIGRTYHINLVRLYG 88
LG GGFG V+ Q K+ A + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFT---DTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+T LV M G + +++ D + + + G+ +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-RNYP 204
II+ D+KP N+LLD + +++D GLA T T GY GTPG+ APE LL Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
+ D ++ G+ L+E+I R
Sbjct: 368 FS--VDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQF---MAEIGTIGRTYHINLVRLYG 88
LG GGFG V+ Q K+ A + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFT---DTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+T LV M G + +++ D + + + G+ +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-RNYP 204
II+ D+KP N+LLD + +++D GLA T T GY GTPG+ APE LL Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 205 ITQKCDVYSFGMLLFEIIGRR 225
+ D ++ G+ L+E+I R
Sbjct: 368 FS--VDYFALGVTLYEMIAAR 386
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHIN 82
LG GG V+ + + +A K+L+ L + R EAQ A + H
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPA 73
Query: 83 LVRLYGFCYDQTKAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+V +Y +T A +V E+++ +L + T+ + ++ +++ + + +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFS 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPE 197
H+ IIH D+KPANIL+ A + KV DFG+A+ + + N+ T+ GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
R + + DVYS G +L+E++
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVL 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
++ D+++ G ++++++
Sbjct: 210 SASKSSDLWALGCIIYQLVA 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G +GVV P G +A K ++ + + EI + H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ VY E D + T++L + + T R + LH +IH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCN--------PENTHDSTSGYRGTPGYSAPEFLL 200
D+KP+N+L+++ KV DFGLA++ + P + T Y APE +L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195
Query: 201 RNYPITQKCDVYSFGMLLFEIIGRR 225
+ ++ DV+S G +L E+ RR
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 27 NYSTKLGAGGFGVVYKGQFP-----NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
Y ++LG G FG V ++ G +A K L+ + F EI + +
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 72
Query: 82 NLVRLYGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
+V+ G Y + +L V E++ +G L +L L +LL + +G+ YL
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY-SAPEF 198
++R +H D+ NIL++++ K+ADFGLAKL + + +P + APE
Sbjct: 133 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 199 LLRNYPITQKCDVYSFGMLLFEII 222
L N +++ DV+SFG++L+E+
Sbjct: 190 LSDNI-FSRQSDVWSFGVVLYELF 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLFEIIG 223
NY P+ + D++S G++ + ++
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLS 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKT----CLNKRVEAQFMAEIGTIGRTY---HIN 82
++G G +G VYK + P+ G +A K ++ + + E+ + R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 83 LVRLYGFCYD-----QTKAALVYEFMENGSLDKYL-FTDTEVLKWEKLLDIAIGTARGIA 136
+VRL C + K LV+E ++ L YL L E + D+ RG+
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
+LH C I+H D+KP NIL+ + + K+ADFGLA++ + + + + T Y AP
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAP 188
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E LL++ T D++S G + E+ R+
Sbjct: 189 EVLLQSTYAT-PVDMWSVGCIFAEMFRRK 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 192
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 193
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V +G+KIA K L + A+ E+ + H N++ L
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 117 DVF---TPATSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 169 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 220
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L D++S G ++ E++ R
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 148
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE-LLTEK 207
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 208 SACKSSDLWALGCIIYQLVA 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHIN 82
LG GG V+ + + +A K+L+ L + R EAQ A + H
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPA 73
Query: 83 LVRLYGFCYDQTKAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+V +Y +T A +V E+++ +L + T+ + ++ +++ + + +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFS 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPE 197
H+ IIH D+KPANI++ A + KV DFG+A+ + + N+ T+ GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 198 FLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTL-------DWFPKQVWDEYEKG 250
R + + DVYS G +L+E++ S D++ D P E
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSA 248
Query: 251 ELAAKVL 257
+L A VL
Sbjct: 249 DLDAVVL 255
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 190
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 187
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G +GVV P G +A K ++ + + EI + H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 91 YDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ VY E D + T++L + + T R + LH +IH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIH 135
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCN--------PENTHDSTSGYRGTPGYSAPEFLL 200
D+KP+N+L+++ KV DFGLA++ + P + T Y APE +L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVML 195
Query: 201 RNYPITQKCDVYSFGMLLFEIIGRR 225
+ ++ DV+S G +L E+ RR
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 190
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 195
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 32 LGAGGFGVVYK-----GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V K Q VK+ I K + + + E+ + + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKV---INKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD-----IAIGTARGIAYLHEE 141
+ D + +V E G L E++K ++ + I GI Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFD------EIIKRKRFSEHDAARIIKQVFSGITYMHK- 139
Query: 142 CNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF 198
I+H D+KP NILL++K K+ DFGL+ C +NT GT Y APE
Sbjct: 140 --HNIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNT--KMKDRIGTAYYIAPEV 194
Query: 199 LLRNYPITQKCDVYSFGMLLFEIIG 223
L Y +KCDV+S G++L+ ++
Sbjct: 195 LRGTYD--EKCDVWSAGVILYILLS 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 106 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 218
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 29/235 (12%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYL---------- 112
+ M+E+ + H N+V L G C ++ E+ G L +L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 113 -----FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVA 167
E L LL + A+G+A+L ++ IH D+ N+LL AK+
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 208
Query: 168 DFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
DFGLA+ ++ + R + APE + + T + DV+S+G+LL+EI
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIF 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 29 STKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN 82
S +LG G FG+VY+G VK +A K + + R +F+ E + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSLDKYL------FTDTEVL---KWEKLLDIAIGTAR 133
+VRL G ++ E M G L YL + VL K++ +A A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG- 192
G+AYL+ + +H D+ N + F+ K+ DFG+ + + +++ +G G
Sbjct: 137 GMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTR-----DIYETDYYRKGGKGL 188
Query: 193 ----YSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ +PE L++ T DV+SFG++L+EI
Sbjct: 189 LPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 27 NYSTKLGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-Y 79
N LG G FG V + + +A K+LK M+E+ + +
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 80 HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTD-----------TEVLKWEKLLDI 127
H+N+V L G C +V EF + G+L YL + + L E L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 128 AIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGY 187
+ A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 188 RGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 207 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 151
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEK 210
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 211 SACKSSDLWALGCIIYQLVA 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 93 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAP 196
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 128
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 187
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 188 SACKSSDLWALGCIIYQLVA 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 188
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 189 -NYEPLGLEADMWSIGVITY 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 188
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 189 -NYEPLGLEADMWSIGVITY 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLF 219
PE + NY P+ + D++S G++ +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITY 209
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLF 219
PE + NY P+ + D++S G++ +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITY 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 31 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 88
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 145
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 146 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 201
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 202 -LPYGPEVDIWSLGIMVIEMV 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ A K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 570
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEA--------QFMAEIGTIGRTYHI 81
+LG+G F +V K Q G + AAK +K +R+ + + E+ + H
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIK---KRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N++ L+ ++T L+ E + G L +L + E L ++ G+ YLH
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH-- 125
Query: 142 CNQRIIHYDIKPANILLDAKF----SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
++RI H+D+KP NI+L K K+ DFG+A N + GTP + APE
Sbjct: 126 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 181
Query: 198 FLLRNY-PITQKCDVYSFGMLLF 219
+ NY P+ + D++S G++ +
Sbjct: 182 IV--NYEPLGLEADMWSIGVITY 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 29 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 86
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 143
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 144 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 199
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 200 -LPYGPEVDIWSLGIMVIEMV 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLF 219
PE + NY P+ + D++S G++ +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITY 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 147
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEK 206
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 207 SACKSSDLWALGCIIYQLVA 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 210 SAXKSSDLWALGCIIYQLVA 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 127
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 186
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 187 SACKSSDLWALGCIIYQLVA 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 28 YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
Y +G G FG V++ + P + +A K+LK + ++A F E + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYL----------FTDTEV------------- 118
N+V+L G C L++E+M G L+++L + +++
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 119 LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE 178
L + L IA A G+AYL E ++ +H D+ N L+ K+ADFGL++
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 179 NTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
+ + + + PE + N T + DV+++G++L+EI
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFS 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 125
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 184
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 185 SACKSSDLWALGCIIYQLVA 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 93 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAP 196
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKI--LKTCLNKRVEAQFMAEIGTIGRT-YHINLVRLY 87
+G G FG V K + +G+++ A I +K +K F E+ + + +H N++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 88 GFCYDQTKAALVYEFMENGSL------DKYLFTD---------TEVLKWEKLLDIAIGTA 132
G C + L E+ +G+L + L TD L ++LL A A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG 192
RG+ YL + ++ IH ++ NIL+ + AK+ADFGL++ E T G R
Sbjct: 150 RGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG-RLPVR 203
Query: 193 YSAPEFLLRNYPI-TQKCDVYSFGMLLFEII 222
+ A E L NY + T DV+S+G+LL+EI+
Sbjct: 204 WMAIESL--NYSVYTTNSDVWSYGVLLWEIV 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLF 219
PE + NY P+ + D++S G++ +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITY 209
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F +V K + G++ AAK +K ++ + E+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L E L E+ G+ YLH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 145 RIIHYDIKPANI-LLDAKF---SAKVADFGLAKLCNPENTHDSTSGYR-----GTPGYSA 195
+I H+D+KP NI LLD K+ DFGLA H+ G GTP + A
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVA 186
Query: 196 PEFLLRNY-PITQKCDVYSFGMLLF 219
PE + NY P+ + D++S G++ +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITY 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 74 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 131
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 188
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 189 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 244
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 245 -LPYGPEVDIWSLGIMVIEMV 264
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 99 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 151 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAP 202
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 210 SACKSSDLWALGCIIYQLVA 229
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEA--------QFMAEIGTIGRTYHI 81
+LG+G F +V K Q G + AAK +K +R+ + + E+ + H
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIK---KRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N++ L+ ++T L+ E + G L +L + E L ++ G+ YLH
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH-- 132
Query: 142 CNQRIIHYDIKPANILLDAKF----SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
++RI H+D+KP NI+L K K+ DFG+A N + GTP + APE
Sbjct: 133 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 188
Query: 198 FLLRNY-PITQKCDVYSFGMLLF 219
+ NY P+ + D++S G++ +
Sbjct: 189 IV--NYEPLGLEADMWSIGVITY 209
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEA--------QFMAEIGTIGRTYHI 81
+LG+G F +V K Q G + AAK +K +R+ + + E+ + H
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIK---KRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N++ L+ ++T L+ E + G L +L + E L ++ G+ YLH
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH-- 146
Query: 142 CNQRIIHYDIKPANILLDAKF----SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
++RI H+D+KP NI+L K K+ DFG+A N + GTP + APE
Sbjct: 147 -SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 202
Query: 198 FLLRNY-PITQKCDVYSFGMLLF 219
+ NY P+ + D++S G++ +
Sbjct: 203 IV--NYEPLGLEADMWSIGVITY 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 151 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 265
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 266 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 321
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 322 -LPYGPEVDIWSLGIMVIEMV 341
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 126
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 185
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 186 SACKSSDLWALGCIIYQLVA 205
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHIN 82
LG GG V+ + + +A K+L+ L + R EAQ A + H
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPA 73
Query: 83 LVRLYGFCYDQTKAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+V +Y +T A +V E+++ +L + T+ + ++ +++ + + +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFS 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPE 197
H+ IIH D+KPANI++ A + KV DFG+A+ + + N+ T+ GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
R + + DVYS G +L+E++
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVL 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 20 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 134
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 135 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 190
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 191 -LPYGPEVDIWSLGIMVIEMV 210
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 148
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 207
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 208 SACKSSDLWALGCIIYQLVA 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
++G G +G V+ G++ G K+A K+ T EA + E I +T + + GF
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTT----EEASWFRET-EIYQTVLMRHENILGFI 97
Query: 91 YDQTKAA-------LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC- 142
K L+ ++ ENGSL YL + T L + +L +A + G+ +LH E
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 143 ----NQRIIHYDIKPANILLDAKFSAKVADFGLA-KLCNPENTHDSTSGYR-GTPGYSAP 196
I H D+K NIL+ + +AD GLA K + N D R GT Y P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 197 EFL-----LRNYPITQKCDVYSFGMLLFEIIGR 224
E L ++ D+YSFG++L+E+ R
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 148
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 207
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 208 SACKSSDLWALGCIIYQLVA 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 23 SFTNNYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HI 81
S+ +N+ K+G G G+V + K+ A + K L K+ + + I R Y H
Sbjct: 24 SYLDNF-IKIGEGSTGIVCIATVRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
N+V +Y + +V EF+E G+L + T T + E++ + + + ++ LH
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHA- 138
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
Q +IH DIK +ILL K++DFG + E GTP + APE + R
Sbjct: 139 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 194
Query: 202 NYPITQKCDVYSFGMLLFEII 222
P + D++S G+++ E++
Sbjct: 195 -LPYGPEVDIWSLGIMVIEMV 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 210 SACKSSDLWALGCIIYQLVA 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 210 SACKSSDLWALGCIIYQLVA 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 150
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 209
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 210 SACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 151
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 210
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 211 SACKSSDLWALGCIIYQLVA 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL 83
N++S +G GGFG VY + + K+ A CL+K+ E + ++L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM---KCLDKKRIKMKQGETLALNERIMLSL 245
Query: 84 VRL----------YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR 133
V Y F + K + + + M G L Y + V + A
Sbjct: 246 VSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIIL 303
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
G+ ++H N+ +++ D+KPANILLD +++D GLA + + H S GT GY
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L + D +S G +LF+++
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL 83
N++S +G GGFG VY + + K+ A CL+K+ E + ++L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM---KCLDKKRIKMKQGETLALNERIMLSL 244
Query: 84 VRL----------YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR 133
V Y F + K + + + M G L Y + V + A
Sbjct: 245 VSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIIL 302
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
G+ ++H N+ +++ D+KPANILLD +++D GLA + + H S GT GY
Sbjct: 303 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 355
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L + D +S G +LF+++
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL 83
N++S +G GGFG VY + + K+ A CL+K+ E + ++L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM---KCLDKKRIKMKQGETLALNERIMLSL 245
Query: 84 VRL----------YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR 133
V Y F + K + + + M G L Y + V + A
Sbjct: 246 VSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIIL 303
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
G+ ++H N+ +++ D+KPANILLD +++D GLA + + H S GT GY
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L + D +S G +LF+++
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL 83
N++S +G GGFG VY + + K+ A CL+K+ E + ++L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM---KCLDKKRIKMKQGETLALNERIMLSL 245
Query: 84 VRL----------YGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR 133
V Y F + K + + + M G L Y + V + A
Sbjct: 246 VSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIIL 303
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
G+ ++H N+ +++ D+KPANILLD +++D GLA + + H S GT GY
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L + D +S G +LF+++
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 31 KLGAGGFGVVYKGQFPN-GVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTY---HINLVR 85
++G G +G VYK + P+ G +A K ++ + + + E+ + R H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 86 LYGFCYD-----QTKAALVYEFMENGSLDKYL-FTDTEVLKWEKLLDIAIGTARGIAYLH 139
L C + K LV+E ++ L YL L E + D+ RG+ +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
C I+H D+KP NIL+ + + K+ADFGLA++ + + + T Y APE L
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALFPVVVTLWYRAPEVL 183
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
L++ T D++S G + E+ R+
Sbjct: 184 LQSTYAT-PVDMWSVGCIFAEMFRRK 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ ++ G + + APE + R + T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKWMAPESINFRRF--T 190
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 31 KLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINL-VRLYG 88
+LG G +GVV K + P+G A K ++ +N + + + + ++ RT V YG
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 89 FCYDQTKAALVYEFMENGSLDKY---LFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + + E + + SLDK+ + + + + L IA+ + + +LH + +
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPEFLLRNY 203
+IH D+KP+N+L++A K DFG++ + D +G + P PE + Y
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 204 PITQKCDVYSFGMLLFEI 221
+ K D++S G+ E+
Sbjct: 218 SV--KSDIWSLGITXIEL 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 90 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAP 193
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 30/242 (12%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVK-IAAKILKTCLNKRVE-AQFMAEIGTIGRTYHI 81
+NY K +G G +G VY N K +A K + ++ + + EI + R
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 82 NLVRLYGFCY--DQTKAALVYEFMENGSLD-KYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
++RLY D K +Y +E D K LF L E + I G ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE-------------------- 178
HE IIH D+KPAN LL+ S KV DFGLA+ N E
Sbjct: 146 HESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 179 NTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW 238
N + + T Y APE +L T+ D++S G + E++ ++ + ++
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262
Query: 239 FP 240
FP
Sbjct: 263 FP 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 153
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 212
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 213 SACKSSDLWALGCIIYQLVA 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLFEIIG 223
NY P+ + D++S G++ + ++
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLS 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 94 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 146 YIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAP 197
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 100 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 203
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 90 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 193
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 132
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 191
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 192 SACKSSDLWALGCIIYQLVA 211
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 99 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 151 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 202
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 93 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 196
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 87 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 138
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 139 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 190
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 90 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 193
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 90 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 193
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Query: 27 NYSTKLGAGGFGVVYK-----GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
N LG G FG V K Q VK+ I K + + + E+ + + H
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKV---INKASAKNKDTSTILREVELLKKLDHP 81
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD-----IAIGTARGIA 136
N+++L+ D + +V E G L E++K ++ + I GI
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFD------EIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
Y+H+ I+H D+KP NILL++K K+ DFGL+ C +NT GT Y
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNT--KMKDRIGTAYY 189
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
APE L Y +KCDV+S G++L+ ++
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLS 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Query: 27 NYSTKLGAGGFGVVYK-----GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI 81
N LG G FG V K Q VK+ I K + + + E+ + + H
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKV---INKASAKNKDTSTILREVELLKKLDHP 81
Query: 82 NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD-----IAIGTARGIA 136
N+++L+ D + +V E G L E++K ++ + I GI
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFD------EIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
Y+H+ I+H D+KP NILL++K K+ DFGL+ C +NT GT Y
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNT--KMKDRIGTAYY 189
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
APE L Y +KCDV+S G++L+ ++
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLS 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 94 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 146 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 197
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 100 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 203
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 95 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 198
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 100 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 203
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F VV + + A KIL K + K + ++ E + R H V+LY
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 147
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 206
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 207 SACKSSDLWALGCIIYQLVA 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGT-IGRTYHINLV 84
LG G FG V + + +A K+LK M+E+ I +H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD-------------TEVLKWEKLLDIAIG 130
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGT 190
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 191 PGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 214 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V++G + + + +A K K C + V +F+ E T+ + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + ++ E G L +L L L+ A + +AYL ++R +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI N+L+ + K+ DFGL++ + ++ G + + APE + R + T
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRF--T 570
Query: 207 QKCDVYSFGMLLFEII 222
DV+ FG+ ++EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 111 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 163 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 214
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 108 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 211
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 107 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 159 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 210
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYK------GQFPNGVKIAAKILKTCLNKR 63
P + + F N + LGAG FG V + G+ +K+A K+LK+ +
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEV---- 118
+ M+E+ + H N+V L G C ++ E+ G L +L E
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 119 ------------------LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDA 160
L+ LL + A+G+A+L ++ IH D+ N+LL
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 193
Query: 161 KFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFE 220
AK+ DFGLA+ ++ + R + APE + + T + DV+S+G+LL+E
Sbjct: 194 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWE 252
Query: 221 I 221
I
Sbjct: 253 I 253
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 95 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAP 198
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 46/244 (18%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAE--IGTIGRTYHINLVRLYGF 89
+G G +G VYKG + +A K+ + N++ F+ E I + H N+ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF-SFANRQ---NFINEKNIYRVPLMEHDNIARF--I 73
Query: 90 CYDQTKAA-------LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D+ A LV E+ NGSL KYL T W +A RG+AYLH E
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 143 NQ------RIIHYDIKPANILLDAKFSAKVADFGLA------KLCNPENTHDSTSGYRGT 190
+ I H D+ N+L+ + ++DFGL+ +L P ++ GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 191 PGYSAPEFL-----LRNY-PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVW 244
Y APE L LR+ ++ D+Y+ G++ +EI R C+ D FP +
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR------CT----DLFPGESV 241
Query: 245 DEYE 248
EY+
Sbjct: 242 PEYQ 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 95 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAP 198
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 94 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 146 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 197
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 93 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 196
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVE-----AQFMAEIGTIGRTYHINLV 84
+LG+G F VV K + G++ AAK +K K E+ + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L+ ++T L+ E + G L +L + E L E+ + G+ YLH +
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 145 RIIHYDIKPANI-LLD---AKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+I H+D+KP NI LLD K K+ DFGLA + N + GTP + APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV- 189
Query: 201 RNY-PITQKCDVYSFGMLLF 219
NY P+ + D++S G++ +
Sbjct: 190 -NYEPLGLEADMWSIGVITY 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 13 PVRFTLEQLCSFTNNYSTK--LGAGGFG-VVYKGQFPNGVKIAAKIL--KTCLNKRVEAQ 67
P F F++ Y + LG G FG V+ G + A K++ + K +
Sbjct: 36 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 68 FMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWE 122
+ E+ + + H N+++LY F D+ LV E G L + F++ + +
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 153
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPEN 179
I GI Y+H+ +I+H D+KP N+LL++K + ++ DFGL+
Sbjct: 154 ----IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 199
Query: 180 THDSTSGYR----GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
TH S GT Y APE L Y +KCDV+S G++L+ ++
Sbjct: 200 THFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILYILL 244
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 26 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 86 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 137
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 138 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 189
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 13 PVRFTLEQLCSFTNNYSTK--LGAGGFG-VVYKGQFPNGVKIAAKIL--KTCLNKRVEAQ 67
P F F++ Y + LG G FG V+ G + A K++ + K +
Sbjct: 37 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 68 FMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWE 122
+ E+ + + H N+++LY F D+ LV E G L + F++ + +
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 154
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPEN 179
I GI Y+H+ +I+H D+KP N+LL++K + ++ DFGL+
Sbjct: 155 ----IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 200
Query: 180 THDSTSGYR----GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
TH S GT Y APE L Y +KCDV+S G++L+ ++
Sbjct: 201 THFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILYILL 245
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 95 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAP 198
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 85 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 137 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 188
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKR-VEAQFMAEIGTIGRTYHINLVR 85
LG G FG VY K F +K+ + K+ + K VE Q EI +H N++R
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKV---LFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
LY + YD+ + L+ E+ G L K L + ++ I A + Y H ++
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH---GKK 143
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPI 205
+IH DIKP N+LL K K+ADFG + + P + GT Y PE ++
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMC---GTLDYLPPE-MIEGRMH 198
Query: 206 TQKCDVYSFGMLLFEII 222
+K D++ G+L +E++
Sbjct: 199 NEKVDLWCIGVLCYELL 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 85 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 137 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 188
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 84 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 13 PVRFTLEQLCSFTNNYSTK--LGAGGFG-VVYKGQFPNGVKIAAKIL--KTCLNKRVEAQ 67
P F F++ Y + LG G FG V+ G + A K++ + K +
Sbjct: 13 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 68 FMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWE 122
+ E+ + + H N+++LY F D+ LV E G L + F++ + +
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 130
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPEN 179
I GI Y+H+ +I+H D+KP N+LL++K + ++ DFGL+
Sbjct: 131 ----IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 176
Query: 180 THDSTSGYR----GTPGYSAPEFLLRNYPITQKCDVYSFGMLLF 219
TH S GT Y APE L Y +KCDV+S G++L+
Sbjct: 177 THFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 27 NYSTKLGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-Y 79
N LG G FG V + + +A K+LK M+E+ + +
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 80 HINLVRLYGFCYDQTKAALV-YEFMENGSLDKYLFTD--------------TEVLKWEKL 124
H+N+V L G C +V EF + G+L YL + + L E L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 125 LDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDST 184
+ + A+G+ +L +++ IH D+ NILL K K+ DFGLA+ +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 185 SGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEIIG 223
R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 208 GDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 111 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D GY T Y AP
Sbjct: 163 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAP 214
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 31 KLGAGGFG--VVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G FG ++ K + +I + ++ + + E+ + H N+V+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVL-KWEKLLDIAIGTARGIAYLHEECNQRII 147
+ +V ++ E G L K + VL + +++LD + + ++H+ ++I+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKIL 147
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
H DIK NI L + ++ DFG+A++ N +T + GTP Y +PE + N P
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYYLSPE-ICENKPYNN 204
Query: 208 KCDVYSFGMLLFEI 221
K D+++ G +L+E+
Sbjct: 205 KSDIWALGCVLYEL 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 13 PVRFTLEQLCSFTNNYSTK--LGAGGFG-VVYKGQFPNGVKIAAKIL--KTCLNKRVEAQ 67
P F F++ Y + LG G FG V+ G + A K++ + K +
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 68 FMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWE 122
+ E+ + + H N+++LY F D+ LV E G L + F++ + +
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 136
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPEN 179
I GI Y+H+ +I+H D+KP N+LL++K + ++ DFGL+
Sbjct: 137 ----IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 182
Query: 180 THDSTSGYR----GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
TH S GT Y APE L Y +KCDV+S G++L+ ++
Sbjct: 183 THFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILYILL 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHIN 82
LG GG V+ + +A K+L+ L + R EAQ A + H
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPA 73
Query: 83 LVRLYGFCYDQTKAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+V +Y +T A +V E+++ +L + T+ + ++ +++ + + +
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFS 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPE 197
H+ IIH D+KPANI++ A + KV DFG+A+ + + N+ T+ GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
R + + DVYS G +L+E++
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVL 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 32 LGAGGFGV-VYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG G F V + + A KIL K + K + ++ E + R H V+LY
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 89 FCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
D K + +NG L KY+ F +T + I +A + YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSA--LEYLH---G 148
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IIH D+KP NILL+ ++ DFG AK+ +PE+ + + GT Y +PE LL
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEK 207
Query: 204 PITQKCDVYSFGMLLFEIIG 223
+ D+++ G ++++++
Sbjct: 208 SACKSSDLWALGCIIYQLVA 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ D+GLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG GGFGVV++ + + A K ++ + + M E+ + + H +VR +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD------------------IAIGTA 132
++ E ++ S YL+ ++ + E L D I + A
Sbjct: 73 LEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLA----------KLCNPENTHD 182
+ +LH ++ ++H D+KP+NI KV DFGL + P +
Sbjct: 129 EAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+G GT Y +PE + N + K D++S G++LFE++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLILFELL 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHIN 82
LG GG V+ + +A K+L+ L + R EAQ A + H
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPA 73
Query: 83 LVRLYGFCYDQTKAA----LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+V +Y +T A +V E+++ +L + T+ + ++ +++ + + +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFS 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPE 197
H+ IIH D+KPANI++ A + KV DFG+A+ + + N+ T+ GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
R + + DVYS G +L+E++
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVL 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 94 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 146 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 197
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 31 KLGAGGFGVVYKGQFPN------GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
+LG G FG V+ + N + +A K LK ++ F E + H ++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 83
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFT---DTEVLK-----------WEKLLDIAIG 130
R +G C + +V+E+M +G L+++L + D ++L +LL +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGT 190
A G+ YL +H D+ N L+ K+ DFG+++ + +
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 191 PGYSAPEFLLRNYPITQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLD 237
+ PE +L T + DV+SFG++L+EI G++ Q +++ +D
Sbjct: 201 IRWMPPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLYGF 89
+G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIAYL 138
T A + EF D YL T ++K +KL D + RG+ Y+
Sbjct: 100 F---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 151
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF 198
H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y APE
Sbjct: 152 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEI 203
Query: 199 LLRNYPITQKCDVYSFGMLLFEIIGRR 225
+L Q D++S G ++ E++ R
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 107 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 159 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 210
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 108 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 211
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGL + +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 31 KLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVE--AQFMAEIGTIGRTYHINLVRLY 87
++G G FG VY + N +A K + + E + E+ + + H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + A LV E+ GS L + L+ ++ + G +G+AYLH + +I
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMI 176
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL--RNYPI 205
H D+K NILL K+ DFG A + P N + GTP + APE +L
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQY 230
Query: 206 TQKCDVYSFGMLLFEIIGRR 225
K DV+S G+ E+ R+
Sbjct: 231 DGKVDVWSLGITCIELAERK 250
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ--FMAEIGTIGRTYHINLVRLY 87
KLG G +G+V+K G +A K + +AQ F + + H N+V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 88 GFCY--DQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ LV+++ME D + +L+ + + I YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET---DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG--- 129
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLC----------------NPENTHDST---SG 186
++H D+KP+NILL+A+ KVADFGL++ N EN D +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y T Y APE LL + T+ D++S G +L EI+
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 31 KLGAGGFGVVYKGQFPN------GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
+LG G FG V+ + N + +A K LK ++ F E + H ++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 77
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFT---DTEVLK-----------WEKLLDIAIG 130
R +G C + +V+E+M +G L+++L + D ++L +LL +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGT 190
A G+ YL +H D+ N L+ K+ DFG+++ + +
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 191 PGYSAPEFLLRNYPITQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLD 237
+ PE +L T + DV+SFG++L+EI G++ Q +++ +D
Sbjct: 195 IRWMPPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 31 KLGAGGFGVVYKGQFPN------GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
+LG G FG V+ + N + +A K LK ++ F E + H ++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 106
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFT---DTEVLK-----------WEKLLDIAIG 130
R +G C + +V+E+M +G L+++L + D ++L +LL +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGT 190
A G+ YL +H D+ N L+ K+ DFG+++ + +
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 191 PGYSAPEFLLRNYPITQKCDVYSFGMLLFEII--GRRKNAQDCSSDTLD 237
+ PE +L T + DV+SFG++L+EI G++ Q +++ +D
Sbjct: 224 IRWMPPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 24/185 (12%)
Query: 51 IAAKILKTCLNK--------RVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAA----L 98
+A K+L+ L + R EAQ A + H +V +Y +T A +
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALN------HPAIVAVYDTGEAETPAGPLPYI 110
Query: 99 VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILL 158
V E+++ +L + T+ + ++ +++ + + + H+ IIH D+KPANI++
Sbjct: 111 VMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 159 DAKFSAKVADFGLAK-LCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGML 217
A + KV DFG+A+ + + N+ T+ GT Y +PE R + + DVYS G +
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCV 225
Query: 218 LFEII 222
L+E++
Sbjct: 226 LYEVL 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGT-IGRTYHINLV 84
LG G FG V + + +A K+LK M+E+ I +H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + + R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 214 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 31 KLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVE--AQFMAEIGTIGRTYHINLVRLY 87
++G G FG VY + N +A K + + E + E+ + + H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G + A LV E+ GS L + L+ ++ + G +G+AYLH + +I
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMI 137
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL--RNYPI 205
H D+K NILL K+ DFG A + P N + GTP + APE +L
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQY 191
Query: 206 TQKCDVYSFGMLLFEIIGRR 225
K DV+S G+ E+ R+
Sbjct: 192 DGKVDVWSLGITCIELAERK 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 84 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +GVV+K + + +I A K L++ + ++ + EI + + H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 89 FCYDQTKAALVYEFMEN---GSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + LV+E+ ++ LD+Y E L + I T + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL----VKSITWQTLQAVNFCHK---HN 122
Query: 146 IIHYDIKPANILLDAKFSAKVADFGLAKLCN-PENTHDSTSGYRGTPGYSAPEFLLRNYP 204
IH D+KP NIL+ K+ DFG A+L P + +D R Y +PE L+ +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR---WYRSPELLVGDTQ 179
Query: 205 ITQKCDVYSFGMLLFEIIG 223
DV++ G + E++
Sbjct: 180 YGPPVDVWAIGCVFAELLS 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 85 RLYGFCYDQTKAALVY-EFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 235
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEIIG 223
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGT-IGRTYHINLV 84
LG G FG V + + +A K+LK M+E+ I +H+N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + + R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 249 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 280
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 33/221 (14%)
Query: 32 LGAGGFGVVYK----GQFPNGV--KIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG+G FG V G GV ++A K+LK + M+E+ + + H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFT----------------------DTEVLKWE 122
L G C L++E+ G L YL + D VL +E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD 182
LL A A+G+ +L + +H D+ N+L+ K+ DFGLA+ ++ +
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
R + APE L T K DV+S+G+LL+EI
Sbjct: 230 VRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 85 RLYGFCYDQTKAALVY-EFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 13 PVRFTLEQLCSFTNNYSTK--LGAGGFG-VVYKGQFPNGVKIAAKIL--KTCLNKRVEAQ 67
P F F++ Y + LG G FG V+ G + A K++ + K +
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 68 FMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWE 122
+ E+ + + H N+ +LY F D+ LV E G L + F++ + +
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 130
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK---FSAKVADFGLAKLCNPEN 179
I GI Y H+ +I+H D+KP N+LL++K + ++ DFGL+
Sbjct: 131 ----IIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS------- 176
Query: 180 THDSTSGYR----GTPGYSAPEFLLRNYPITQKCDVYSFGMLLF 219
TH S GT Y APE L Y +KCDV+S G++L+
Sbjct: 177 THFEASKKXKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGT-IGRTYHINLV 84
LG G FG V + + +A K+LK M+E+ I +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKI----AAKILK-TCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V+ + +G A K+LK L R + E + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 87 YGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
+ + K L+ +F+ G L + +FT+ +V + L +A+ +
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG----- 146
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPEFL 199
II+ D+KP NILLD + K+ DFGL+K E+ Y GT Y APE +
Sbjct: 147 ----IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
R TQ D +SFG+L+FE++
Sbjct: 199 NRRGH-TQSADWWSFGVLMFEML 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKI----AAKILK-TCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V+ + +G A K+LK L R + E + H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 87 YGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
+ + K L+ +F+ G L + +FT+ +V + L +A+ +
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG----- 147
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPEFL 199
II+ D+KP NILLD + K+ DFGL+K E+ Y GT Y APE +
Sbjct: 148 ----IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
R TQ D +SFG+L+FE++
Sbjct: 200 NRRGH-TQSADWWSFGVLMFEML 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKI----AAKILK-TCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V+ + +G A K+LK L R + E + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 87 YGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
+ + K L+ +F+ G L + +FT+ +V + L +A+ +
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG----- 146
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPEFL 199
II+ D+KP NILLD + K+ DFGL+K E+ Y GT Y APE +
Sbjct: 147 ----IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
R TQ D +SFG+L+FE++
Sbjct: 199 NRRGH-TQSADWWSFGVLMFEML 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 51/289 (17%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVE---AQFMAEIGTIGRTYHINLVRLYG 88
+G+GGFG V+K + +I K T + KRV+ + E+ + + H+N+V G
Sbjct: 19 IGSGGFGQVFKAKH----RIDGK---TYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 89 ----FCYD-----------QTKAALV-YEFMENGSLDKYLFTDTEVLKWEKL-----LDI 127
F YD +TK + EF + G+L++++ E + EKL L++
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALEL 127
Query: 128 AIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGY 187
+G+ Y+H ++++I+ D+KP+NI L K+ DFGL + +
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--- 181
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCS---SDTLDWFPKQVW 244
+GT Y +PE + + ++ D+Y+ G++L E++ A + S +D D ++
Sbjct: 182 KGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF 240
Query: 245 DEYEKGELAAKVLGCGIEENDR-EEAERMSMVALWCVQDCPEARPPMSA 292
D+ EK L K+L E DR +E + + +W + PE +A
Sbjct: 241 DKKEKT-LLQKLLSKKPE--DRPNTSEILRTLTVW--KKSPEKNERHTA 284
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 85 RLYGFCYDQTKAALVY-EFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 31 KLGAGGFGVVYKGQFPNGVK--IAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
++G G FG V+KG N + +A KI+ + EI + + + + YG
Sbjct: 30 RIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTA-----RGIAYLHEECN 143
+K ++ E++ GS ++L+ + I T +G+ YLH E
Sbjct: 89 SYLKGSKLWIIMEYLGGGSA-------LDLLRAGPFDEFQIATMLKEILKGLDYLHSE-- 139
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
+ IH DIK AN+LL + K+ADFG+A +T + + GTP + APE +++
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE-VIQQS 195
Query: 204 PITQKCDVYSFGMLLFEI 221
K D++S G+ E+
Sbjct: 196 AYDSKADIWSLGITAIEL 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 32 LGAGGFGVVYKGQF-PNGVKIAAKIL--KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLY 87
+G G FG V + V A K+L K L K+ E M+E + + H LV L+
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
K V +++ G L +L + L+ A A + YLH + I+
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLNIV 161
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDS-TSGYRGTPGYSAPEFLLRNYPIT 206
+ D+KP NILLD++ + DFG LC H+S TS + GTP Y APE +L P
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCGTPEYLAPE-VLHKQPYD 217
Query: 207 QKCDVYSFGMLLFEII 222
+ D + G +L+E++
Sbjct: 218 RTVDWWCLGAVLYEML 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 54/347 (15%)
Query: 26 NNYSTK--LGAGGFGVVYKGQFPNGVK-IAAKILKTCLNKRVE-AQFMAEIGTIGRTYHI 81
+NY K +G G +G VY N K +A K + ++ + + EI + R
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 82 NLVRLYGFCY--DQTKAALVYEFMENGSLD-KYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
++RL+ D K +Y +E D K LF L + + I G ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE-------------------- 178
HE IIH D+KPAN LL+ S K+ DFGLA+ N +
Sbjct: 148 HESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 179 ---NTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
N + + T Y APE +L T D++S G + E++ K+ + ++
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNR 264
Query: 236 LDWFP-------------KQVWDEYEKGELAA--KVLGCGIEENDR--EEAERMSMVALW 278
FP K+V ++ + +L V+G EE+ + + E + + L+
Sbjct: 265 FPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLF 324
Query: 279 CVQDCPEARPPMSAVVKMLEGGVEIVAPPKPFRYLYSIGMD-ALKSP 324
+D + S++ K G++++ F I +D AL P
Sbjct: 325 PTRDGIDLSKKYSSISK---EGIDLLESMLRFNAQKRITIDKALSHP 368
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +G+ T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + +A K+LK M+E+ + +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYLFTD---------------TEVLKWEKLLDIA 128
L G C +V EF + G+L YL + + L E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR 188
A+G+ +L +++ IH D+ NILL K K+ DFGLA+ + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 189 GTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEI 221
+ APE + R Y I + DV+SFG+LL+EI
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +G+ T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKILK---TCLNKRVEAQFMAEIGTIGRTY-HINLVRL 86
LG G FG V+ +F + A K LK ++ VE M E + + H L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT-MVEKRVLSLAWEHPFLTHM 83
Query: 87 YGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
FC QTK L V E++ G L Y + A G+ +LH ++
Sbjct: 84 --FCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLSRATFYAAEIILGLQFLH---SK 137
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENT--HDSTSGYRGTPGYSAPEFLLRN 202
I++ D+K NILLD K+ADFG+ K EN T+ + GTP Y APE LL
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNXFCGTPDYIAPEILL-G 192
Query: 203 YPITQKCDVYSFGMLLFEII 222
D +SFG+LL+E++
Sbjct: 193 QKYNHSVDWWSFGVLLYEML 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKILK---TCLNKRVEAQFMAEIGTIGRTY-HINLVRL 86
LG G FG V+ +F + A K LK ++ VE M E + + H L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT-MVEKRVLSLAWEHPFLTHM 84
Query: 87 YGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
FC QTK L V E++ G L Y + A G+ +LH ++
Sbjct: 85 --FCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLSRATFYAAEIILGLQFLH---SK 138
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENT--HDSTSGYRGTPGYSAPEFLLRN 202
I++ D+K NILLD K+ADFG+ K EN T+ + GTP Y APE LL
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPDYIAPEILL-G 193
Query: 203 YPITQKCDVYSFGMLLFEII 222
D +SFG+LL+E++
Sbjct: 194 QKYNHSVDWWSFGVLLYEML 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ D GLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ D GLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +G T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K KL D + RG+
Sbjct: 84 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +GY T Y AP
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ FGLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 30 TKLGAGGFGVV-YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G G+V + +G ++A K++ +R E F E+ + H N+V +Y
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYK 109
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ ++ EF++ G+L L E++ + + +AYLH Q +IH
Sbjct: 110 SYLVGEELWVLMEFLQGGALTD--IVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIH 164
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIK +ILL K++DFG + + GTP + APE + R+ T+
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKXLVGTPYWMAPEVISRSLYATE- 221
Query: 209 CDVYSFGMLLFEII 222
D++S G+++ E++
Sbjct: 222 VDIWSLGIMVIEMV 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 84 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D +G+ T Y AP
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG VY+G + N + +A K K + +FM+E + H ++V+L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ ++ E G L YL + LK L+ ++ + +AYL E N +
Sbjct: 76 GII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL-ESIN--CV 131
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI NIL+ + K+ DFGL++ E+ + + S R + +PE + R + T
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRF--T 188
Query: 207 QKCDVYSFGMLLFEIIG 223
DV+ F + ++EI+
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPN----GVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG VY+G + N + +A K K + +FM+E + H ++V+L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ ++ E G L YL + LK L+ ++ + +AYL E N +
Sbjct: 92 GII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL-ESIN--CV 147
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI NIL+ + K+ DFGL++ E+ + + S R + +PE + R + T
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRF--T 204
Query: 207 QKCDVYSFGMLLFEIIG 223
DV+ F + ++EI+
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G+++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ D GLA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC- 90
+G G +G V++G + G +A KI + R E + E + T + + GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRET-ELYNTVMLRHENILGFIA 69
Query: 91 ------YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
+ T+ L+ + E GSL YL T L L I + A G+A+LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLAKL-CNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ +AD GLA + N D + R GT Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 198 FLLRNYPIT-----QKCDVYSFGMLLFEIIGR 224
L + ++ D+++FG++L+E+ R
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPNG----VKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG VY+G + N + +A K K + +FM+E + H ++V+L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
G ++ ++ E G L YL + LK L+ ++ + +AYL E N +
Sbjct: 80 GII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL-ESIN--CV 135
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPIT 206
H DI NIL+ + K+ DFGL++ E+ + + S R + +PE + R + T
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRF--T 192
Query: 207 QKCDVYSFGMLLFEIIG 223
DV+ F + ++EI+
Sbjct: 193 TASDVWMFAVCMWEILS 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 31 KLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHIN-LVRLYG 88
++G+G G V+K +F G IA K ++ NK + + ++ + +++ +V+ +G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLL-DIAIGTARGIAYLHEECNQRII 147
T + E M G+ + L + E++L + + + + YL E+ +I
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVI 147
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
H D+KP+NILLD + K+ DFG++ + D ++ G Y APE + P
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPTKP 204
Query: 208 ----KCDVYSFGMLLFEIIGRRKNAQDCSSD 234
+ DV+S G+ L E+ + ++C +D
Sbjct: 205 DYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC- 90
+G G +G V++G + G +A KI + R E + E + T + + GF
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRET-ELYNTVMLRHENILGFIA 98
Query: 91 ------YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
+ T+ L+ + E GSL YL T L L I + A G+A+LH E
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLAKL-CNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ +AD GLA + N D + R GT Y APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 198 FLLRNYPIT-----QKCDVYSFGMLLFEIIGR 224
L + ++ D+++FG++L+E+ R
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC- 90
+G G +G V++G + G +A KI + R E + E + T + + GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRET-ELYNTVMLRHENILGFIA 69
Query: 91 ------YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC-- 142
+ T+ L+ + E GSL YL T L L I + A G+A+LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 143 ---NQRIIHYDIKPANILLDAKFSAKVADFGLAKL-CNPENTHDSTSGYR-GTPGYSAPE 197
I H D+K NIL+ +AD GLA + N D + R GT Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 198 FLLRNYPIT-----QKCDVYSFGMLLFEIIGR 224
L + ++ D+++FG++L+E+ R
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 32 LGAGGFGVVY---KGQFPN-GVKIAAKILK-TCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
LG G FG V+ K P+ G A K+LK L R + E + H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 87 YGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
+ + K L+ +F+ G L + +FT+ +V + L ++A+G + +LH
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY--LAELALG----LDHLH-- 147
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPEFL 199
+ II+ D+KP NILLD + K+ DFGL+K E Y GT Y APE +
Sbjct: 148 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
R + D +S+G+L+FE++
Sbjct: 203 NRQ-GHSHSADWWSYGVLMFEML 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA-KILKTCLNKRVEAQFMAEIGTIGR-TYHINLVRLYGF 89
+G G +G VYKG+ ++AA K++ ++ E + EI + + ++H N+ YG
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 90 CYDQTKAA------LVYEFMENGSL-DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
+ LV EF GS+ D T LK E + I RG+++LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ-- 147
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR----GTPGYSAPEF 198
++IH DIK N+LL K+ DFG++ D T G R GTP + APE
Sbjct: 148 -HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTVGRRNTFIGTPYWMAPEV 200
Query: 199 LL--RNYPITQ--KCDVYSFGMLLFEI 221
+ N T K D++S G+ E+
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVK----IAAKILKTCL---NKRVEAQFMAEIGTIGRTYHINLV 84
LG GG+G V++ + G A K+LK + N + A AE + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLH 139
L K L+ E++ G L L F + + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPE 197
++ II+ D+KP NI+L+ + K+ DFGL K E+ HD T + GT Y APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPE 191
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L+R+ + D +S G L+++++
Sbjct: 192 ILMRSGH-NRAVDWWSLGALMYDML 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVK----IAAKILKTCL---NKRVEAQFMAEIGTIGRTYHINLV 84
LG GG+G V++ + G A K+LK + N + A AE + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLH 139
L K L+ E++ G L L F + + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR--GTPGYSAPE 197
++ II+ D+KP NI+L+ + K+ DFGL K E+ HD T + GT Y APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPE 191
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L+R+ + D +S G L+++++
Sbjct: 192 ILMRSGH-NRAVDWWSLGALMYDML 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 49/223 (21%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR---LYG 88
+G G +G V++G + +G +A KI + R E + E Y+ L+R + G
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSS----RDEQSWFRET----EIYNTVLLRHDNILG 66
Query: 89 FCYD-------QTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
F T+ L+ + E+GSL Y F + L+ L +A+ A G+A+LH E
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSL--YDFLQRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 142 C-----NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYR-------- 188
I H D K N+L+ + +AD GLA + H S Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM------HSQGSDYLDIGNNPRV 178
Query: 189 GTPGYSAPEFLLRNYPITQKC-------DVYSFGMLLFEIIGR 224
GT Y APE L + I C D+++FG++L+EI R
Sbjct: 179 GTKRYMAPEVL--DEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 58/301 (19%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG--- 88
+G+GGFG V+K + +I K K + E+ + + H+N+V G
Sbjct: 20 IGSGGFGQVFKAKH----RIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWD 75
Query: 89 -FCYD------------------------QTKAALV-YEFMENGSLDKYLFTDTEVLKWE 122
F YD +TK + EF + G+L++++ E + E
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI----EKRRGE 131
Query: 123 KL-----LDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNP 177
KL L++ +G+ Y+H ++++IH D+KP+NI L K+ DFGL + +
Sbjct: 132 KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL--VTSL 186
Query: 178 ENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCS---SD 234
+N T +GT Y +PE + + ++ D+Y+ G++L E++ A + S +D
Sbjct: 187 KNDGKRTRS-KGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD 244
Query: 235 TLDWFPKQVWDEYEKGELAAKVLGCGIEENDR-EEAERMSMVALWCVQDCPEARPPMSAV 293
D ++D+ EK L K+L E DR +E + + +W + PE + V
Sbjct: 245 LRDGIISDIFDKKEKT-LLQKLLSKKPE--DRPNTSEILRTLTVW--KKSPEKNERHTCV 299
Query: 294 V 294
+
Sbjct: 300 L 300
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
LG G FG V K + + A I K + + ++E+ + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYA-IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 92 D-----------QTKAALV--YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+ + K+ L E+ ENG+L + ++ + ++ + ++Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLC------------NPENTHDSTSG 186
H +Q IIH D+KP NI +D + K+ DFGLAK N + D+ +
Sbjct: 133 H---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT Y A E L +K D+YS G++ FE+I
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 88 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DF LA+ +T D +GY T Y AP
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAP 191
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +G V+K + +I A ++ ++ V + + EI + H N+VRL+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ K LV+EF + L KY + L E + +G+ + H ++ ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 149 YDIKPANILLDAKFSAKVADFGLAK 173
D+KP N+L++ K+ADFGLA+
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+ +G+G +G V G ++A K L + A+ E+ + H N++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD------TEVLKWEKLLD-----IAIGTARGIA 136
T A + EF D YL T ++K +KL D + RG+
Sbjct: 108 DVF---TPARSLEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
Y+H + IIH D+KP+N+ ++ K+ DFGLA+ +T D G T Y AP
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAP 211
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E +L Q D++S G ++ E++ R
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+ LG G F VV + G A K + K E+ EI + + H N+V L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 87 YGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKW-EKLLDIAIGTARGIAYLHE 140
LV + + G L +K +T+ + ++LD + YLH
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD-------AVYYLH- 137
Query: 141 ECNQRIIHYDIKPANILL---DAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
I+H D+KP N+L D + ++DFGL+K+ E D S GTPGY APE
Sbjct: 138 --RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPE 192
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L + P ++ D +S G++ + ++
Sbjct: 193 VLAQK-PYSKAVDCWSIGVIAYILL 216
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKILKTCLN-KRVEAQFMAEIGTIGRTYHINLVRLYGF 89
LG G G +VY+G F N +IL C + E Q + E H N++R F
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDE-----HPNVIRY--F 84
Query: 90 CYDQTK----------AALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
C ++ + AA + E++E +L+ T G+A+LH
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ---------TTSGLAHLH 135
Query: 140 EECNQRIIHYDIKPANILLD-----AKFSAKVADFGLA-KLCNPENTHDSTSGYRGTPGY 193
+ I+H D+KP NIL+ K A ++DFGL KL ++ SG GT G+
Sbjct: 136 ---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 194 SAPEFL---LRNYPITQKCDVYSFGMLLFEIIG 223
APE L + P T D++S G + + +I
Sbjct: 193 IAPEMLSEDCKENP-TYTVDIFSAGCVFYYVIS 224
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G GGF V G +A KI+ + EI + H ++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
K +V E+ G L Y+ + + L E+ + +AY+H +Q H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRD 133
Query: 151 IKPANILLDAKFSAKVADFGL-AKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
+KP N+L D K+ DFGL AK ++ H T G+ Y+APE + + +
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC--GSLAYAAPELIQGKSYLGSEA 191
Query: 210 DVYSFGMLLFEII 222
DV+S G+LL+ ++
Sbjct: 192 DVWSMGILLYVLM 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FG VY G++ V I ++ +++A F E+ +T H N+V G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA-FKREVMAYRQTRHENVVLFMGACM 99
Query: 92 DQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDI 151
A++ + +L + VL K IA +G+ YLH + I+H D+
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDL 156
Query: 152 KPANILLDAKFSAKVADFGL---AKLCNPENTHDSTSGYRGTPGYSAPEFLLR------- 201
K N+ D + DFGL + + D G + APE + +
Sbjct: 157 KSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 202 -NYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGCG 260
P ++ DV++ G + +E+ R + ++ + W +G G
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW-----------------QMGTG 258
Query: 261 IEENDRE--EAERMSMVALWCVQDCPEARPPMSAVVKMLE 298
++ N + + +S + L+C E RP + ++ MLE
Sbjct: 259 MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+G+G +G V Y + K+A K L + A+ E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD-TEVLKWEKLLD-----IAIGTARGIAYLHEE 141
T A + +F E + + D ++K + L D + RG+ Y+H
Sbjct: 94 DVF---TPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH-- 148
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
+ IIH D+KP+N+ ++ ++ DFGLA+ + E T GY T Y APE +L
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLN 202
Query: 202 NYPITQKCDVYSFGMLLFEII 222
Q D++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+G+G +G V Y + K+A K L + A+ E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD-TEVLKWEKLLD-----IAIGTARGIAYLHEE 141
T A + +F E + + D ++K + L D + RG+ Y+H
Sbjct: 94 DVF---TPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH-- 148
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
+ IIH D+KP+N+ ++ ++ DFGLA+ + E T GY T Y APE +L
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLN 202
Query: 202 NYPITQKCDVYSFGMLLFEII 222
Q D++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV----EAQFMAEIGTIGRTYHIN 82
++ LG G F V + K+ A C+ K+ E EI + + H N
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAI---KCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 83 LVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAY 137
+V L L+ + + G L +K +T+ + + + + Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR------LIFQVLDAVKY 131
Query: 138 LHEECNQRIIHYDIKPANIL---LDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYS 194
LH + I+H D+KP N+L LD ++DFGL+K+ +P + + G TPGY
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TPGYV 185
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEII 222
APE L + P ++ D +S G++ + ++
Sbjct: 186 APEVLAQK-PYSKAVDCWSIGVIAYILL 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
++ LG G F V + K+ A I K L + E EI + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIV 79
Query: 85 RLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
L L+ + + G L +K +T+ + + + + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR------LIFQVLDAVKYLH 133
Query: 140 EECNQRIIHYDIKPANIL---LDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
+ I+H D+KP N+L LD ++DFGL+K+ +P + + G TPGY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TPGYVAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLF 219
E L + P ++ D +S G++ +
Sbjct: 188 EVLAQK-PYSKAVDCWSIGVIAY 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
++ LG G F V + K+ A I K L + E EI + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIV 79
Query: 85 RLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
L L+ + + G L +K +T+ + + + + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR------LIFQVLDAVKYLH 133
Query: 140 EECNQRIIHYDIKPANIL---LDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
+ I+H D+KP N+L LD ++DFGL+K+ +P + + G TPGY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TPGYVAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEII 222
E L + P ++ D +S G++ + ++
Sbjct: 188 EVLAQK-PYSKAVDCWSIGVIAYILL 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
++ LG G F V + K+ A I K L + E EI + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIV 79
Query: 85 RLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
L L+ + + G L +K +T+ + + + + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR------LIFQVLDAVKYLH 133
Query: 140 EECNQRIIHYDIKPANIL---LDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
+ I+H D+KP N+L LD ++DFGL+K+ +P + + G TPGY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TPGYVAP 187
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEII 222
E L + P ++ D +S G++ + ++
Sbjct: 188 EVLAQK-PYSKAVDCWSIGVIAYILL 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+G+G +G V Y + K+A K L + A+ E+ + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTD-TEVLKWEKLLD-----IAIGTARGIAYLHEE 141
T A + +F E + + D ++K + L D + RG+ Y+H
Sbjct: 86 DVF---TPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH-- 140
Query: 142 CNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
+ IIH D+KP+N+ ++ ++ DFGLA+ + E T GY T Y APE +L
Sbjct: 141 -SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLN 194
Query: 202 NYPITQKCDVYSFGMLLFEII 222
Q D++S G ++ E++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
K+G G +G V+K + +I A ++ ++ V + + EI + H N+VRL+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ K LV+EF + L KY + L E + +G+ + H ++ ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 149 YDIKPANILLDAKFSAKVADFGLAK 173
D+KP N+L++ K+A+FGLA+
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLAR 149
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 24 FTNNYSTK--LGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYH 80
F Y K +G G VV + G + A KI++ + Q R H
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151
Query: 81 I--------NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTA 132
I +++ L + LV++ M G L YL T+ L ++ I
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLL 210
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG 192
+++LH I+H D+KP NILLD +++DFG + P + GTPG
Sbjct: 211 EAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---GEKLRELCGTPG 264
Query: 193 YSAPEFLLRNYPIT-----QKCDVYSFGMLLFEIIG 223
Y APE L + T ++ D+++ G++LF ++
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 13 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 126
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 15/201 (7%)
Query: 27 NYSTKLGAGGFGVVYKG-QFPNGVKIA-AKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
+ ++G G F VYKG V++A ++ L K +F E + H N+V
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 85 RLYGFCYDQTKA----ALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
R Y K LV E +G+L YL +V K + L +G+ +LH
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 141 ECNQRIIHYDIKPANILLDAKF-SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
IIH D+K NI + S K+ D GLA L GTP + APE
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXY 202
Query: 200 LRNYPITQKCDVYSFGMLLFE 220
Y + DVY+FG E
Sbjct: 203 EEKYD--ESVDVYAFGXCXLE 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H N+V+ YG + L E+ G L + D + + + A G+ YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH 121
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
I H DIKP N+LLD + + K++DFGLA + N + GT Y APE L
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGEL 252
R + DV+S G++L ++ D + DW K+ W + + L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 253 A 253
A
Sbjct: 239 A 239
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 128
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKIAAKILKTC-LNKRVEAQFMAEIGTIGRTYHINLVR 85
N+ TKL G ++KG++ G I K+LK + R F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 86 LYGFCYDQT--KAALVYEFMENGSLDKYLFTDTE-VLKWEKLLDIAIGTARGIAYLHEEC 142
+ G C L+ +M GSL L T V+ + + A+ ARG+A+LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TL 130
Query: 143 NQRIIHYDIKPANILLDAKFSAKV--ADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
I + + ++++D +A++ AD + + G P + APE L
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSF---------QSPGRMYAPAWVAPEALQ 181
Query: 201 RNYPITQK--CDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLG 258
+ T + D++SF +LL+E++ R D S+ E+ KV
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN----------------MEIGMKVAL 225
Query: 259 CGIEENDREE-AERMSMVALWCVQDCPEARPPMSAVVKMLE 298
G+ + +S + C+ + P RP +V +LE
Sbjct: 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRV---EAQFMAEIGTIGRTYHINLVRLYG 88
LG G +G V N V A +K KR EI H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
+ L E+ G L + D + + + A G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGITH 127
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
DIKP N+LLD + + K++DFGLA + N + GT Y APE L R +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 209 CDVYSFGMLLFEIIGRR---KNAQDCSSDTLDWFPKQV----WDEYEKGELA 253
DV+S G++L ++ D + DW K+ W + + LA
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G VY G ++A + + + E + EI + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDS 85
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V E++ GSL + T+T + ++ + + + +LH + ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTD-VVTET-CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
DIK NILL S K+ DFG PE + ST GTP + APE + R K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRK-AYGPKV 197
Query: 210 DVYSFGMLLFEII 222
D++S G++ E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 37/228 (16%)
Query: 22 CSFTNNYS-----TKLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQF----MAE 71
C F + S K+G G FG V+K + G K+A LK L + + F + E
Sbjct: 11 CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA---LKKVLMENEKEGFPITALRE 67
Query: 72 IGTIGRTYHINLVRLYGFC------YDQTKAA--LVYEFMEN---GSLDKYL--FTDTEV 118
I + H N+V L C Y++ KA+ LV++F E+ G L L FT +E+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 119 LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN-P 177
+ ++L G+ Y+H +I+H D+K AN+L+ K+ADFGLA+ +
Sbjct: 128 KRVMQML------LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 178 ENTHDSTSGYR-GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
+N+ + R T Y PE LL D++ G ++ E+ R
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H N+++L T LV++ M+ G L YL T+ L ++ I I LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
+ I+H D+KP NILLD + K+ DFG + +P S GTP Y APE +
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEII 195
Query: 200 L----RNYP-ITQKCDVYSFGMLLFEIIG 223
N+P ++ D++S G++++ ++
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
LG G FG V K + + A I K + + ++E+ + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYA-IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 92 D-----------QTKAALV--YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+ + K+ L E+ EN +L + ++ + ++ + ++Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLC------------NPENTHDSTSG 186
H +Q IIH D+KP NI +D + K+ DFGLAK N + D+ +
Sbjct: 133 H---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT Y A E L +K D+YS G++ FE+I
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G+G VV P K+A K + + + + EI + + +H N+V Y
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 91 YDQTKAALVYEFMENGS-LD--KYLFTDTE----VLKWEKLLDIAIGTARGIAYLHEECN 143
+ + LV + + GS LD K++ E VL + I G+ YLH+
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE---NTHDSTSGYRGTPGYSAPEFL- 199
IH D+K NILL S ++ADFG++ + + GTP + APE +
Sbjct: 143 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 200 -LRNYPITQKCDVYSFGMLLFEI 221
+R Y K D++SFG+ E+
Sbjct: 200 QVRGYDF--KADIWSFGITAIEL 220
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
+G+G VV P K+A K + + + + EI + + +H N+V Y
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 91 YDQTKAALVYEFMENGS-LD--KYLFTDTE----VLKWEKLLDIAIGTARGIAYLHEECN 143
+ + LV + + GS LD K++ E VL + I G+ YLH+
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPE---NTHDSTSGYRGTPGYSAPEFL- 199
IH D+K NILL S ++ADFG++ + + GTP + APE +
Sbjct: 138 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 200 -LRNYPITQKCDVYSFGMLLFEI 221
+R Y K D++SFG+ E+
Sbjct: 195 QVRGYDF--KADIWSFGITAIEL 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 32 LGAGGFGVVY-KGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG+G F V+ Q G A K +K R ++ EI + + H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-DSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 91 YDQTKAALVYEFMENGSL-DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
T LV + + G L D+ L K L+ + +A + YLHE I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA--VKYLHE---NGIVHR 130
Query: 150 DIKPANIL-LDAKFSAKV--ADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPIT 206
D+KP N+L L + ++K+ DFGL+K+ +N ST+ GTPGY APE L + P +
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC--GTPGYVAPEVLAQK-PYS 185
Query: 207 QKCDVYSFGMLLFEII 222
+ D +S G++ + ++
Sbjct: 186 KAVDCWSIGVITYILL 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 110/273 (40%), Gaps = 43/273 (15%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G +G+VY G+ N V+IA K + + R EI H N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD----IAIGTAR---GIAYLHEECN 143
+ + E + GSL L + KW L D I T + G+ YLH +
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRS-----KWGPLKDNEQTIGFYTKQILEGLKYLH---D 140
Query: 144 QRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL--- 199
+I+H DIK N+L++ K++DFG +K N T + GT Y APE +
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKG 198
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGC 259
R Y + D++S G + E+ + YE GE A +
Sbjct: 199 PRGY--GKAADIWSLGCTIIEMATGKPPF------------------YELGEPQAAMFKV 238
Query: 260 GIEENDREEAERMSMVALWCVQDCPEARPPMSA 292
G+ + E E MS A + C E P A
Sbjct: 239 GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRA 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 7 DIAREKPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLN-KRV 64
D+ E ++E +F S +LG G F VV + G + AAK LK +
Sbjct: 12 DLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC 71
Query: 65 EAQFMAEIGTIGRTYHI-NLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTD-TEVLKWE 122
A+ + EI + ++ L+ + ++ L+ E+ G + + E++
Sbjct: 72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN 131
Query: 123 KLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKF---SAKVADFGLAK----LC 175
++ + G+ YLH+ I+H D+KP NILL + + K+ DFG+++ C
Sbjct: 132 DVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188
Query: 176 NPENTHDSTSGYRGTPGYSAPEFLLRNY-PITQKCDVYSFGMLLFEII 222
GTP Y APE L NY PIT D+++ G++ + ++
Sbjct: 189 ELREI-------MGTPEYLAPEIL--NYDPITTATDMWNIGIIAYMLL 227
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 32 LGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G G +G V + + V KIL+ + + + EI + R H ++V++
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 90 CY--DQTKAALVYEFMENGSLD-KYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRI 146
D K +Y +E D K LF L + + G+ Y+H I
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---I 177
Query: 147 IHYDIKPANILLDAKFSAKVADFGLAKLCN-PENTHD----------------------- 182
+H D+KPAN L++ S KV DFGLA+ + PEN +
Sbjct: 178 LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLK 237
Query: 183 -STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFP 240
+G+ T Y APE +L T+ DV+S G + E++ K +D FP
Sbjct: 238 RQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFP 296
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 110/273 (40%), Gaps = 43/273 (15%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G +G+VY G+ N V+IA K + + R EI H N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD----IAIGTAR---GIAYLHEECN 143
+ + E + GSL L + KW L D I T + G+ YLH +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRS-----KWGPLKDNEQTIGFYTKQILEGLKYLH---D 126
Query: 144 QRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL--- 199
+I+H DIK N+L++ K++DFG +K N T + GT Y APE +
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKG 184
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYEKGELAAKVLGC 259
R Y + D++S G + E+ + YE GE A +
Sbjct: 185 PRGY--GKAADIWSLGCTIIEMATGKPPF------------------YELGEPQAAMFKV 224
Query: 260 GIEENDREEAERMSMVALWCVQDCPEARPPMSA 292
G+ + E E MS A + C E P A
Sbjct: 225 GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRA 257
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKI-AAKILK------------TCLNKRVEA-----QF 68
N+ LG G FG V + ++ A KILK T + KRV A F
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
+ ++ + +T + RLY V E++ G L Y K + A
Sbjct: 404 LTQLHSCFQT----MDRLY----------FVMEYVNGGDL-MYHIQQVGRFKEPHAVFYA 448
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSG 186
A G+ +L ++ II+ D+K N++LD++ K+ADFG+ K EN D +T
Sbjct: 449 AEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKX 501
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
+ GTP Y APE ++ P + D ++FG+LL+E++
Sbjct: 502 FCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYEMLA 537
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 129/298 (43%), Gaps = 59/298 (19%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKI-AAKILK------------TCLNKRVEA-----QF 68
N+ LG G FG V + ++ A KILK T + KRV A F
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
+ ++ + +T + RLY V E++ G L Y K + A
Sbjct: 83 LTQLHSCFQT----MDRLY----------FVMEYVNGGDL-MYHIQQVGRFKEPHAVFYA 127
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSG 186
A G+ +L ++ II+ D+K N++LD++ K+ADFG+ K EN D +T
Sbjct: 128 AEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKX 180
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW-------- 238
+ GTP Y APE ++ P + D ++FG+LL+E++ + + D L
Sbjct: 181 FCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 239
Query: 239 FPKQVWDEYE---KGELA---AKVLGCGIE-ENDREEAERMSMVALWCVQDCPEARPP 289
+PK + E KG + K LGCG E E D +E + W + E +PP
Sbjct: 240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID-WEKLERKEIQPP 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 68/325 (20%)
Query: 27 NYSTKLGAGGFGVVYKGQFPNGVKI-AAKILK------------TCLNKRVEA-----QF 68
N+ LG G FG V ++ A KILK T + KRV A F
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
+ ++ + +T + RLY V E++ G L Y K + + A
Sbjct: 82 LTQLHSCFQT----VDRLY----------FVMEYVNGGDL-MYHIQQVGKFKEPQAVFYA 126
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSG 186
+ G+ +LH+ + II+ D+K N++LD++ K+ADFG+ K E+ D +T
Sbjct: 127 AEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTTRE 179
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDW-------- 238
+ GTP Y APE ++ P + D +++G+LL+E++ + D L
Sbjct: 180 FCGTPDYIAPE-IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 238
Query: 239 FPKQVWDEYE---KGELA---AKVLGCGIE-ENDREEAERMSMVALWCVQDCPEARPPMS 291
+PK + E KG + AK LGCG E E D E + W + E +PP
Sbjct: 239 YPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRID-WEKLENREIQPPFK 297
Query: 292 AVV---------KMLEGGVEIVAPP 307
V K G ++ PP
Sbjct: 298 PKVCGKGAENFDKFFTRGQPVLXPP 322
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 52/286 (18%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQF-MAEIGTIGRTYHINLVRLY--- 87
LG GG G+V+ N I K L + + EI I R H N+V+++
Sbjct: 19 LGCGGNGLVFSA-VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 88 -----------GFCYDQTKAALVYEFMENGSLDKYLFTD-TEVLKWEKLLD-----IAIG 130
G + +V E+ME TD VL+ LL+
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYME---------TDLANVLEQGPLLEEHARLFMYQ 128
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAK-FSAKVADFGLAKLCNPENTHD-STSGYR 188
RG+ Y+H + ++H D+KPAN+ ++ + K+ DFGLA++ +P +H S
Sbjct: 129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 189 GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDEYE 248
T Y +P LL T+ D+++ G + E++ + E E
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-------------ELE 232
Query: 249 KGELAAKVLGCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVV 294
+ +L + + + E DR+E +S++ ++ D E P++ ++
Sbjct: 233 QMQLILESIPV-VHEEDRQEL--LSVIPVYIRNDMTEPHKPLTQLL 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 67 QFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL--VYEFMENGSLD-----KYLFTDTEVL 119
Q EI + + H N+V+L D + L V+E + G + K L D
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 120 KWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPEN 179
++ L+ +GI YLH Q+IIH DIKP+N+L+ K+ADFG++ N
Sbjct: 142 YFQDLI-------KGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFK 188
Query: 180 THDS-TSGYRGTPGYSAPEFLLRNYPI--TQKCDVYSFGMLLF 219
D+ S GTP + APE L I + DV++ G+ L+
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL--KTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+G G FG V Q + K+ A K + + C+ + E+ + H LV L+
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
D+ +V + + G L +Y K E + + YL NQRIIH
Sbjct: 83 SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIH 138
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL--LRNYPIT 206
D+KP NILLD + DF +A + P T +T GT Y APE + +
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMA--GTKPYMAPEMFSSRKGAGYS 195
Query: 207 QKCDVYSFGMLLFEII-GRR 225
D +S G+ +E++ GRR
Sbjct: 196 FAVDWWSLGVTAYELLRGRR 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 30 TKLGAGGFGVVYKG--QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
TKLG G +G VYK N +I + V + E+ + H N++ L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRII 147
+ + L++E+ EN L KY+ + +V + G+ + H ++R +
Sbjct: 100 SVIHHNHRLHLIFEYAEN-DLKKYMDKNPDV-SMRVIKSFLYQLINGVNFCH---SRRCL 154
Query: 148 HYDIKPANILLDAKFSA-----KVADFGLAK---LCNPENTHDSTSGYRGTPGYSAPEFL 199
H D+KP N+LL ++ K+ DFGLA+ + + TH+ + + Y PE L
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW-----YRPPEIL 209
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
L + + D++S + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H N+++L T LV++ M+ G L YL T+ L ++ I I LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 128
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEF- 198
+ I+H D+KP NILLD + K+ DFG + +P GTP Y APE
Sbjct: 129 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 182
Query: 199 ---LLRNYP-ITQKCDVYSFGMLLFEIIG 223
+ N+P ++ D++S G++++ ++
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H N+++L T LV++ M+ G L YL T+ L ++ I I LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
+ I+H D+KP NILLD + K+ DFG + +P GTP Y APE +
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 195
Query: 200 L----RNYP-ITQKCDVYSFGMLLFEIIG 223
N+P ++ D++S G++++ ++
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G VY G ++A + + + E + EI + + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDS 86
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V E++ GSL + T+T + ++ + + + +LH + ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTD-VVTET-CMDEGQIAAVCRECLQALEFLH---SNQVIHR 141
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
DIK NILL S K+ DFG PE + S GTP + APE + R K
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRK-AYGPKV 198
Query: 210 DVYSFGMLLFEII 222
D++S G++ E+I
Sbjct: 199 DIWSLGIMAIEMI 211
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 56/242 (23%)
Query: 32 LGAGGFGVVY-----KGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRL 86
+G G +GVV + + +KI K +N + + E+ + + +H N+ RL
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 87 YGFCYDQTKAALVYEFMENGSL-DKY-LFTDT---------------------------- 116
Y D+ LV E G L DK +F D
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 117 --------EVLKWEKLL-DIAIGTARGIAYLHEECNQRIIHYDIKPANILL--DAKFSAK 165
+ ++ EKL+ +I + YLH NQ I H DIKP N L + F K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK 210
Query: 166 VADFGLA----KLCNPENTHDSTSGYRGTPGYSAPEFL-LRNYPITQKCDVYSFGMLLFE 220
+ DFGL+ KL N E +T GTP + APE L N KCD +S G+LL
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 221 II 222
++
Sbjct: 269 LL 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 22 CSFTNNYS-----TKLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQF----MAE 71
C F + S K+G G FG V+K + G K+A LK L + + F + E
Sbjct: 11 CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA---LKKVLMENEKEGFPITALRE 67
Query: 72 IGTIGRTYHINLVRLYGFC------YDQTKAA--LVYEFMEN---GSLDKYL--FTDTEV 118
I + H N+V L C Y++ K + LV++F E+ G L L FT +E+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 119 LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN-P 177
+ ++L G+ Y+H +I+H D+K AN+L+ K+ADFGLA+ +
Sbjct: 128 KRVMQML------LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 178 ENTHDSTSGYR-GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
+N+ + R T Y PE LL D++ G ++ E+ R
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG GGF Y+ + ++ A K++ K+ L K + + M+ EI + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
F D +V E SL + L + + + T +G+ YLH N R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+ L+ K+ DFGLA + T GTP Y APE L + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC--GTPNYIAPEVLCKKG-HSFE 222
Query: 209 CDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
D++S G +L+ ++G+ C +T
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 22 CSFTNNYS-----TKLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQF----MAE 71
C F + S K+G G FG V+K + G K+A LK L + + F + E
Sbjct: 11 CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA---LKKVLMENEKEGFPITALRE 67
Query: 72 IGTIGRTYHINLVRLYGFC------YDQTKAA--LVYEFMEN---GSLDKYL--FTDTEV 118
I + H N+V L C Y++ K + LV++F E+ G L L FT +E+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 119 LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN-P 177
+ ++L G+ Y+H +I+H D+K AN+L+ K+ADFGLA+ +
Sbjct: 128 KRVMQML------LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 178 ENTHDSTSGYR-GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
+N+ + R T Y PE LL D++ G ++ E+ R
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G VY G ++A + + + E + EI + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDS 85
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V E++ GSL + T+T + ++ + + + +LH + ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTD-VVTET-CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
DIK NILL S K+ DFG PE + S GTP + APE + R K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRK-AYGPKV 197
Query: 210 DVYSFGMLLFEII 222
D++S G++ E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G VY G ++A + + + E + EI + + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDS 86
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V E++ GSL + T+T + ++ + + + +LH + ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTD-VVTET-CMDEGQIAAVCRECLQALEFLH---SNQVIHR 141
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
+IK NILL S K+ DFG PE + ST GTP + APE + R K
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRK-AYGPKV 198
Query: 210 DVYSFGMLLFEII 222
D++S G++ E+I
Sbjct: 199 DIWSLGIMAIEMI 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 22 CSFTNNYS-----TKLGAGGFGVVYKGQF-PNGVKIAAKILKTCLNKRVEAQF----MAE 71
C F + S K+G G FG V+K + G K+A LK L + + F + E
Sbjct: 10 CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA---LKKVLMENEKEGFPITALRE 66
Query: 72 IGTIGRTYHINLVRLYGFC------YDQTKAA--LVYEFMEN---GSLDKYL--FTDTEV 118
I + H N+V L C Y++ K + LV++F E+ G L L FT +E+
Sbjct: 67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 119 LKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN-P 177
+ ++L G+ Y+H +I+H D+K AN+L+ K+ADFGLA+ +
Sbjct: 127 KRVMQML------LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 177
Query: 178 ENTHDSTSGYR-GTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
+N+ + R T Y PE LL D++ G ++ E+ R
Sbjct: 178 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
K+G G G VY G ++A + + + E + EI + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLDS 85
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHY 149
+ +V E++ GSL + T+T + ++ + + + +LH + ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTD-VVTET-CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140
Query: 150 DIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKC 209
DIK NILL S K+ DFG PE + S GTP + APE + R K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE--MVGTPYWMAPEVVTRK-AYGPKV 197
Query: 210 DVYSFGMLLFEII 222
D++S G++ E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG GGF Y+ + ++ A K++ K+ L K + + M+ EI + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
F D +V E SL + L + + + T +G+ YLH N R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+ L+ K+ DFGLA E + GTP Y APE L + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNYIAPEVLCKKG-HSFE 222
Query: 209 CDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
D++S G +L+ ++G+ C +T
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG GGF Y+ + ++ A K++ K+ L K + + M+ EI + ++V +G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
F D +V E SL + L + + + T +G+ YLH N R+IH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 149
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+ L+ K+ DFGLA E + GTP Y APE L + + +
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNYIAPEVLCKKGH-SFE 206
Query: 209 CDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
D++S G +L+ ++G+ C +T
Sbjct: 207 VDIWSLGCILYTLLVGKPPFETSCLKET 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
T +G+G +G V +G K+A K L + A+ E+ + H N++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEV---LKW--EKLLDIAIGTARGIAYLHEEC 142
T A+ + F + + ++ TD + LK+ EK+ + +G+ Y+H
Sbjct: 90 DVF---TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH--- 143
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ ++H D+KP N+ ++ K+ DFGLA+ + E T GY T Y APE +L
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILSW 198
Query: 203 YPITQKCDVYSFGMLLFEII 222
Q D++S G ++ E++
Sbjct: 199 MHYNQTVDIWSVGCIMAEML 218
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 24 FTNNYSTK--LGAGGFGV----VYKGQFPNGVKIAAKIL-KTCLNKRVEAQFMAEIGTIG 76
FT+ Y K +G G + V ++K ++ A KI+ K+ + E + + G
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKRDPTEEIEILLRYGQ-- 74
Query: 77 RTYHINLVRLYGFCYDQTKAALVYEFMENGSL-DKYL----FTDTEVLKWEKLLDIAIGT 131
H N++ L D +V E M+ G L DK L F++ E +
Sbjct: 75 ---HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA------VLFTI 125
Query: 132 ARGIAYLHEECNQRIIHYDIKPANILLDAKF----SAKVADFGLAKLCNPENTHDSTSGY 187
+ + YLH Q ++H D+KP+NIL + S ++ DFG AK EN T Y
Sbjct: 126 TKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
T + APE L R CD++S G+LL+ ++
Sbjct: 183 --TANFVAPEVLERQ-GYDAACDIWSLGVLLYTML 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMA-EIGTIGRTYHINLVRLYG 88
LG GGF Y+ + ++ A K++ K+ L K + + M+ EI + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
F D +V E SL + L + + + T +G+ YLH N R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
D+K N+ L+ K+ DFGLA E + GTP Y APE L + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKXLCGTPNYIAPEVLCKKG-HSFE 222
Query: 209 CDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
D++S G +L+ ++G+ C +T
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 30 TKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLY 87
T +G+G +G V +G K+A K L + A+ E+ + H N++ L
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVL-----KWEKLLDIAIGTARGIAYLHEEC 142
T A+ + F + + ++ TD + + EK+ + +G+ Y+H
Sbjct: 108 DVF---TPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH--- 161
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ ++H D+KP N+ ++ K+ DFGLA+ + E T GY T Y APE +L
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILSW 216
Query: 203 YPITQKCDVYSFGMLLFEII 222
Q D++S G ++ E++
Sbjct: 217 MHYNQTVDIWSVGCIMAEML 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 52 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 105
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 106 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK--LCNPENTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK + N S
Sbjct: 164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 221 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Query: 32 LGAGGFGV--VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+GAG FGV + + + N + +A K ++ ++++ EI H N+VR
Sbjct: 27 IGAGNFGVARLMRDKQANEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 90 CYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTARGIAYLHEECN 143
T A+V E+ G L + + F++ E +++L+ G++Y H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYAHA--- 133
Query: 144 QRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
++ H D+K N LLD + K+ADFG +K H GTP Y APE LL+
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV---LHSQPKSAVGTPAYIAPEVLLK 190
Query: 202 NYPITQKCDVYSFGMLLFEII 222
+ DV+S G+ L+ ++
Sbjct: 191 KEYDGKVADVWSCGVTLYVML 211
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
LG G FG V K + + A I K + + ++E+ + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYA-IKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 92 D-----------QTKAALV--YEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
+ + K+ L E+ EN +L + ++ + ++ + ++Y+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLC------------NPENTHDSTSG 186
H +Q IIH ++KP NI +D + K+ DFGLAK N + D+ +
Sbjct: 133 H---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT Y A E L +K D YS G++ FE I
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL-DKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H N++ L D LV E M G L DK L + + IG + + YL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYL 137
Query: 139 HEECNQRIIHYDIKPANIL-LDAKFSA---KVADFGLAKLCNPENTHDSTSGYRGTPGYS 194
H +Q ++H D+KP+NIL +D + ++ DFG AK EN T Y T +
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFV 192
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
APE L R + CD++S G+LL+ ++ + SDT
Sbjct: 193 APEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDT 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 10 REKPVRFTLEQLCSFTNNYSTK------LGAGGFGVVYKGQFPNGVKIAA-------KIL 56
E P LE L + YS K LG+G FG V+ K K+L
Sbjct: 4 EEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL 63
Query: 57 KTC-LNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTD 115
+ C + + EI + R H N++++ +Q LV E +G LD + F D
Sbjct: 64 EDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFID 122
Query: 116 TEVLKWEKLLD-IAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKL 174
E L I + YL + IIH DIK NI++ F+ K+ DFG A
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179
Query: 175 CNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+ + GT Y APE L+ N + +++S G+ L+ ++
Sbjct: 180 LERGKLFYT---FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL-DKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H N++ L D LV E M G L DK L + + IG + + YL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYL 137
Query: 139 HEECNQRIIHYDIKPANIL-LDAKFSA---KVADFGLAKLCNPENTHDSTSGYRGTPGYS 194
H +Q ++H D+KP+NIL +D + ++ DFG AK EN T Y T +
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFV 192
Query: 195 APEFLLRNYPITQKCDVYSFGMLLFEIIGRRKNAQDCSSDT 235
APE L R + CD++S G+LL+ ++ + SDT
Sbjct: 193 APEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDT 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 30 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 83
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 84 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 142 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 199 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 12 KPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMA 70
KPV + + + + +LG G FG V++ + G + A K + R+E +
Sbjct: 61 KPVDYEYREEVHWMT-HQPRLGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVE 113
Query: 71 EIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG 130
E+ +V LYG + + E +E GSL + L L ++ L
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQ 172
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENTHDS--TSGY 187
G+ YLH +RI+H D+K N+LL + S A + DFG A P+ S T Y
Sbjct: 173 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 188 -RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT + APE ++ P K D++S ++ ++
Sbjct: 230 IPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHML 264
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTYHIN-LVRLYG 88
+G G FG V + K+ A K+L K + KR ++ F E I + +V+L+
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
D +V E+M G L + KW K TA + L + +IH
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY-----TAEVVLALDAIHSMGLIH 197
Query: 149 YDIKPANILLDAKFSAKVADFGL-AKLCNPENTHDSTSGYRGTPGYSAPEFLLR---NYP 204
D+KP N+LLD K+ADFG K+ H T+ GTP Y +PE L +
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEVLKSQGGDGY 255
Query: 205 ITQKCDVYSFGMLLFEII 222
++CD +S G+ LFE++
Sbjct: 256 YGRECDWWSVGVFLFEML 273
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 22 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 75
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 76 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 134 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 191 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 30 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 83
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 84 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 142 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 199 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 37 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 90
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 91 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 149 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 206 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 52 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 105
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 106 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 209
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 187 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 26 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 79
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 80 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 138 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 195 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFM-AEIGTIGRTYHINLVRLY 87
+G+G +G V G+ G K+A K L + A+ E+ + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 88 G-FCYDQT-----KAALVYEFM--ENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
F D+T LV FM + G L K+ E L +++ + +G+ Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH 145
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
IIH D+KP N+ ++ K+ DFGLA+ + E G T Y APE +
Sbjct: 146 AAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
Query: 200 LRNYPITQKCDVYSFGMLLFEII 222
L TQ D++S G ++ E+I
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMI 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 54 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 107
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 108 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 166 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 211
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 19 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 72
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 73 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 131 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 188 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 187 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA---KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG GGFG V Q K+ A K ++ EA + E + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 89 FCYDQTKA-ALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC----- 142
+ Y+ A LV M G L +++ + AR + Y E C
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIY---------HMGQAGFPEARAVFYAAEICCGLED 301
Query: 143 --NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+RI++ D+KP NILLD +++D GLA + PE + G GT GY APE ++
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG--QTIKGRVGTVGYMAPE-VV 357
Query: 201 RNYPITQKCDVYSFGMLLFEIIGR----RKNAQDCSSDTLDWFPKQVWDEY 247
+N T D ++ G LL+E+I ++ + + ++ K+V +EY
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY 408
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 27 NYSTKLGAGGFGV--VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLV 84
++ +G+G FGV + + + + +A K ++ ++ EI H N+V
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIER--GAAIDENVQREIINHRSLRHPNIV 79
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTARGIAYL 138
R T A++ E+ G L + + F++ E +++LL G++Y
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GVSYC 132
Query: 139 HEECNQRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
H + +I H D+K N LLD + K+ DFG +K H GTP Y AP
Sbjct: 133 H---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 186
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEII 222
E LLR + DV+S G+ L+ ++
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVML 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAA---KILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG GGFG V Q K+ A K ++ EA + E + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 89 FCYDQTKA-ALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC----- 142
+ Y+ A LV M G L +++ + AR + Y E C
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIY---------HMGQAGFPEARAVFYAAEICCGLED 301
Query: 143 --NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+RI++ D+KP NILLD +++D GLA + PE + G GT GY APE ++
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG--QTIKGRVGTVGYMAPE-VV 357
Query: 201 RNYPITQKCDVYSFGMLLFEIIGR----RKNAQDCSSDTLDWFPKQVWDEY 247
+N T D ++ G LL+E+I ++ + + ++ K+V +EY
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY 408
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 56 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 109
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 110 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 168 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 213
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 46 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 99
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 100 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 158 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 203
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 97 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 150
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 151 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 209 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 254
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLC---NPENTHDSTS 185
R +AY+H + I H DIKP N+LLD + K+ DFG AK P ++ +
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
YR APE + T DV+S G +L E++
Sbjct: 187 YYR------APELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 23 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 76
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 77 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 135 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----------VR 180
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 12 KPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMA 70
KPV + + + + ++G G FG V++ + G + A K + R+E +
Sbjct: 47 KPVDYEYREEVHWMT-HQPRVGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVE 99
Query: 71 EIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG 130
E+ +V LYG + + E +E GSL + L L ++ L
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQ 158
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENTHDS--TSGY 187
G+ YLH +RI+H D+K N+LL + S A + DFG A P+ S T Y
Sbjct: 159 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 188 -RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT + APE ++ P K D++S ++ ++
Sbjct: 216 IPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHML 250
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKR 63
P + + F N + LGAG FG V + +K +A K+LK +
Sbjct: 25 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
M+E+ + H+N+V L G C ++ E+ G L +L +
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 123 K-----------------LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAK 165
K LL + A+G+A+L ++ IH D+ NILL K
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 201
Query: 166 VADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ DFGLA+ ++ + R + APE + N T + DV+S+G+ L+E+
Sbjct: 202 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 31 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 84
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 85 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYR 188
R +AY+H + I H DIKP N+LLD + K+ DFG AK R
Sbjct: 143 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-----------QLVR 188
Query: 189 GTPG--------YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
G P Y APE + T DV+S G +L E++
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 187 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 12 KPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMA 70
KPV + + + + +LG G FG V++ + G + A K + R+E
Sbjct: 82 KPVDYEYREEVHWAT-HQLRLGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAE 134
Query: 71 EIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG 130
E+ +V LYG + + E +E GSL + L + L ++ L
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQ 193
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENTHDS--TSGY 187
G+ YLH ++RI+H D+K N+LL + S A + DFG A P+ S T Y
Sbjct: 194 ALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 188 -RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT + APE +L K DV+S ++ ++
Sbjct: 251 IPGTETHMAPEVVL-GRSCDAKVDVWSSCCMMLHML 285
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKR 63
P + + F N + LGAG FG V + +K +A K+LK +
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
M+E+ + H+N+V L G C ++ E+ G L +L +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 123 K-----------------LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAK 165
K LL + A+G+A+L ++ IH D+ NILL K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 208
Query: 166 VADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ DFGLA+ ++ + R + APE + N T + DV+S+G+ L+E+
Sbjct: 209 ICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLHR--- 139
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA + T GTP Y APE L +
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 197
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 198 H-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 12 KPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMA 70
KPV + + + + ++G G FG V++ + G + A K + R+E +
Sbjct: 63 KPVDYEYREEVHWMT-HQPRVGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVE 115
Query: 71 EIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG 130
E+ +V LYG + + E +E GSL + L L ++ L
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQ 174
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENTHDS--TSGY 187
G+ YLH +RI+H D+K N+LL + S A + DFG A P+ S T Y
Sbjct: 175 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 188 -RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT + APE ++ P K D++S ++ ++
Sbjct: 232 IPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHML 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLHR--- 135
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA + T GTP Y APE L +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 193
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 194 H-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLHR--- 135
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA + T GTP Y APE L +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 193
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 194 H-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 30 TKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGRT-YHINLVRL 86
++LG G +G V+K + ++ A + + + A+ +AE+G+ + H VRL
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 87 Y------GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
G Y QT+ L ++ + + + E W L D T +A+LH
Sbjct: 123 EQAWEEGGILYLQTE--LCGPSLQQ-HCEAWGASLPEAQVWGYLRD----TLLALAHLH- 174
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
+Q ++H D+KPANI L + K+ DFGL T + G P Y APE L
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL---GTAGAGEVQEGDPRYMAPELLQ 229
Query: 201 RNYPITQKCDVYSFGMLLFEI 221
+Y DV+S G+ + E+
Sbjct: 230 GSYGTA--ADVFSLGLTILEV 248
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 34/174 (19%)
Query: 65 EAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL 124
EA EI + R H N+++L Y++ K + Y+ + V +++
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM------------YMVMEYCVCGMQEM 97
Query: 125 LDIAIGTAR---------------GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADF 169
LD ++ R G+ YLH +Q I+H DIKP N+LL + K++
Sbjct: 98 LD-SVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISAL 153
Query: 170 GLAKLCNPENTHDSTSGYRGTPGYSAPEFL--LRNYPITQKCDVYSFGMLLFEI 221
G+A+ +P D+ +G+P + PE L + K D++S G+ L+ I
Sbjct: 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFS-GFKVDIWSAGVTLYNI 206
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLC---NPENTHDSTS 185
R +AY+H + I H DIKP N+LLD + K+ DFG AK P ++ +
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
YR APE + T DV+S G +L E++
Sbjct: 187 YYR------APELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D+ LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAKLC---NPENTHDSTS 185
R +AY+H + I H DIKP N+LLD + K+ DFG AK P ++ +
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 186 GYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
YR APE + T DV+S G +L E++
Sbjct: 187 YYR------APELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKR 63
P + + F N + LGAG FG V + +K +A K+LK +
Sbjct: 27 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
M+E+ + H+N+V L G C ++ E+ G L +L +
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 123 K-----------------LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAK 165
K LL + A+G+A+L ++ IH D+ NILL K
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 203
Query: 166 VADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ DFGLA+ ++ + R + APE + N T + DV+S+G+ L+E+
Sbjct: 204 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H LV L+ +++ V E++ G L + L E + + + YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
E + II+ D+K N+LLD++ K+ D+G+ K D+TS + GTP Y APE +
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPE-I 224
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
LR D ++ G+L+FE++ R
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H LV L+ +++ V E++ G L + L E + + + YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
E + II+ D+K N+LLD++ K+ D+G+ K D+TS + GTP Y APE +
Sbjct: 139 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE-I 192
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
LR D ++ G+L+FE++ R
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 25/227 (11%)
Query: 18 LEQLCSFTNNYSTKLGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAE 71
L+++ + +LG FG VYKG +A K LK + +F E
Sbjct: 20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 79
Query: 72 IGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLF----------TDTE---- 117
R H N+V L G ++++ + +G L ++L TD +
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 118 -VLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
L+ + + A G+ YL + ++H D+ N+L+ K + K++D GL +
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 196
Query: 177 PENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
+ + + APE ++ + D++S+G++L+E+
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKR 63
P + + F N + LGAG FG V + +K +A K+LK +
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
M+E+ + H+N+V L G C ++ E+ G L +L +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 123 K-----------------LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAK 165
K LL + A+G+A+L ++ IH D+ NILL K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 208
Query: 166 VADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ DFGLA+ ++ + R + APE + N T + DV+S+G+ L+E+
Sbjct: 209 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 263
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 88 GFCYDQTKAALVYEFMENGSL---DKYLF----TDTEVLKWEKLLDIAIGTARGIAYLHE 140
G + + ++YE+MEN S+ D+Y F T + + + I +Y+H
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 141 ECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL 200
E N I H D+KP+NIL+D K++DFG ++ G RGT + PEF
Sbjct: 170 EKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM----VDKKIKGSRGTYEFMPPEFFS 223
Query: 201 RNYPIT-QKCDVYSFGMLLF 219
K D++S G+ L+
Sbjct: 224 NESSYNGAKVDIWSLGICLY 243
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 13 PVRFTLEQLCSFTNN---YSTKLGAGGFGVVYKGQFPNGVK------IAAKILKTCLNKR 63
P + + F N + LGAG FG V + +K +A K+LK +
Sbjct: 9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 64 VEAQFMAEIGTIGRT-YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWE 122
M+E+ + H+N+V L G C ++ E+ G L +L +
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 123 K-----------------LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAK 165
K LL + A+G+A+L ++ IH D+ NILL K
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 185
Query: 166 VADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ DFGLA+ ++ + R + APE + N T + DV+S+G+ L+E+
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 93/225 (41%), Gaps = 25/225 (11%)
Query: 18 LEQLCSFTNNYSTKLGAGGFGVVYKGQF------PNGVKIAAKILKTCLNKRVEAQFMAE 71
L+++ + +LG FG VYKG +A K LK + +F E
Sbjct: 3 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 72 IGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLF----------TDTE---- 117
R H N+V L G ++++ + +G L ++L TD +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 118 -VLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
L+ + + A G+ YL + ++H D+ N+L+ K + K++D GL +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 177 PENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEI 221
+ + + APE ++ + D++S+G++L+E+
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEV 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTYHIN-LVRLYG 88
+G G FG V + + K+ A K+L K + KR ++ F E I + +V+L+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
D +V E+M G L + KW + TA + L + IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 191
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR---NYPI 205
D+KP N+LLD K+ADFG N E + GTP Y +PE L +
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 250
Query: 206 TQKCDVYSFGMLLFEII 222
++CD +S G+ L+E++
Sbjct: 251 GRECDWWSVGVFLYEML 267
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 20 QLCSFTNNYSTKLGAGGFGVVYKGQFPNGVKIAA--KILKTCLNKRVEAQFMAEIGTIGR 77
Q S+T+ + +G G FGVVY+ + + ++ A K+L+ K E Q M ++
Sbjct: 18 QEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 78 TYHINLVRLYGFCY------DQTKAALVYEFMENG--SLDKYLFTDTEVLKWEKLLDIAI 129
H N+VRL F Y D LV +++ + ++ + L +
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 130 GTARGIAYLHEECNQRIIHYDIKPANILLDAKFSA-KVADFGLAK-LCNPE-NTHDSTSG 186
R +AY+H + I H DIKP N+LLD + K+ DFG AK L E N S
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y Y APE + T DV+S G +L E++
Sbjct: 187 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTYHIN-LVRLYG 88
+G G FG V + + K+ A K+L K + KR ++ F E I + +V+L+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
D +V E+M G L + KW + TA + L + IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 196
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR---NYPI 205
D+KP N+LLD K+ADFG N E + GTP Y +PE L +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 206 TQKCDVYSFGMLLFEII 222
++CD +S G+ L+E++
Sbjct: 256 GRECDWWSVGVFLYEML 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Query: 24 FTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGR---T 78
FT+ Y K +G G + V K C++K +F +I + T
Sbjct: 20 FTDGYEVKEDIGVGSYSVC----------------KRCIHKATNXEFAVKIIDKSKRDPT 63
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLD------------ 126
I ++ YG + + ++G KY++ TE+ K +LLD
Sbjct: 64 EEIEILLRYG---QHPNIITLKDVYDDG---KYVYVVTELXKGGELLDKILRQKFFSERE 117
Query: 127 ---IAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKF----SAKVADFGLAKLCNPEN 179
+ + + YLH Q ++H D+KP+NIL + S ++ DFG AK EN
Sbjct: 118 ASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 180 THDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLF 219
T Y T + APE L R CD++S G+LL+
Sbjct: 175 GLLXTPCY--TANFVAPEVLERQ-GYDAACDIWSLGVLLY 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H LV L+ +++ V E++ G L + L E + + + YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
E + II+ D+K N+LLD++ K+ D+G+ K D+TS + GTP Y APE +
Sbjct: 124 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE-I 177
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
LR D ++ G+L+FE++ R
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLH 139
H LV L+ +++ V E++ G L + L E + + + YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
E + II+ D+K N+LLD++ K+ D+G+ K D+TS + GTP Y APE +
Sbjct: 128 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE-I 181
Query: 200 LRNYPITQKCDVYSFGMLLFEIIGRR 225
LR D ++ G+L+FE++ R
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTYHIN-LVRLYG 88
+G G FG V + + K+ A K+L K + KR ++ F E I + +V+L+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIH 148
D +V E+M G L + KW + TA + L + IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 196
Query: 149 YDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR---NYPI 205
D+KP N+LLD K+ADFG N E + GTP Y +PE L +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 206 TQKCDVYSFGMLLFEII 222
++CD +S G+ L+E++
Sbjct: 256 GRECDWWSVGVFLYEML 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLH---R 133
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA E + GTP Y APE L +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 192 H-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLHR--- 159
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA E + GTP Y APE L +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 218 -HSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 32 LGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGR-TYHINLVRLYGF 89
L GGF VY+ Q +G + A K L + ++ A + E+ + + + H N+V+ F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA-IIQEVCFMKKLSGHPNIVQ---F 91
Query: 90 CYDQTKAALVYEFMENGSLDKYLFTD------TEVLK---------WEKLLDIAIGTARG 134
C + A++ E + G + L T+ E LK + +L I T R
Sbjct: 92 C---SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 135 IAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRG----- 189
+ ++H + IIH D+K N+LL + + K+ DFG A + + ++ R
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 190 -----TPGYSAPEF--LLRNYPITQKCDVYSFGMLLFEIIGRRKNAQD 230
TP Y PE L N+PI +K D+++ G +L+ + R+ +D
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 46/211 (21%)
Query: 32 LGAGGFGV------------VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY 79
+G+G FGV V G KIAA + + +N R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHR-------------SLR 73
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTAR 133
H N+VR T A+V E+ G L + + F++ E +++L+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS------- 126
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTP 191
G++Y H ++ H D+K N LLD + K+ DFG +K H GTP
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 180
Query: 192 GYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y APE LL+ + DV+S G+ L+ ++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVEAQFMAEIGTIGRTY-HINLVRLYG 88
LG GGF ++ + ++ A KI+ K+ L K + + M+ +I R+ H ++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 89 FCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
F D +V E SL + T+ E + L I +G YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQ----YLHR--- 157
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
R+IH D+K N+ L+ K+ DFGLA E + GTP Y APE L +
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 204 PITQKCDVYSFGMLLFE-IIGRRKNAQDCSSDT 235
+ + DV+S G +++ ++G+ C +T
Sbjct: 216 H-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 12 KPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKGQ-FPNGVKIAAKILKTCLNKRVEAQFMA 70
KPV + + + + +LG G FG V++ + G + A K + R+E
Sbjct: 63 KPVDYEYREEVHWAT-HQLRLGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAE 115
Query: 71 EIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG 130
E+ +V LYG + + E +E GSL + L + L ++ L
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQ 174
Query: 131 TARGIAYLHEECNQRIIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENT-HDSTSG-- 186
G+ YLH ++RI+H D+K N+LL + S A + DFG A P+ D +G
Sbjct: 175 ALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT + APE +L K DV+S ++ ++
Sbjct: 232 IPGTETHMAPEVVL-GRSCDAKVDVWSSCCMMLHML 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 26 NNYST---KLGAGGFGVVYKGQFPNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRTYH 80
N Y T +G G +G V K G +I AAK + + V+ +F EI + H
Sbjct: 8 NQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDH 65
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSL-----DKYLFTDTEVLKWEKLLDIAIGTARGI 135
N++RLY D T LV E G L K +F +++ + I +
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR------IMKDVLSAV 119
Query: 136 AYLHEECNQRIIHYDIKPANILL--DAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPG 192
AY H+ + H D+KP N L D+ S K+ DFGLA P + GTP
Sbjct: 120 AYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPY 173
Query: 193 YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
Y +P+ L Y +CD +S G++++ ++
Sbjct: 174 YVSPQVLEGLY--GPECDEWSAGVMMYVLL 201
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 32 LGAGGFGVVYKGQFP-NGVKIAAKILKTCL---NKRVEAQFMAE-IGTIGRTYHINLVRL 86
LG G FG V + G A K+LK + + VE + I ++ R H L +L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-HPFLTQL 89
Query: 87 YGFCYDQTKAAL--VYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
FC QT L V EF+ G L + + + A + +LH ++
Sbjct: 90 --FCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFYAAEIISALMFLH---DK 143
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAK--LCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
II+ D+K N+LLD + K+ADFG+ K +CN +T+ + GTP Y APE +L+
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV----TTATFCGTPDYIAPE-ILQE 198
Query: 203 YPITQKCDVYSFGMLLFEII 222
D ++ G+LL+E++
Sbjct: 199 MLYGPAVDWWAMGVLLYEML 218
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 26 NNYST---KLGAGGFGVVYKGQFPNGVKI--AAKILKTCLNKRVEAQFMAEIGTIGRTYH 80
N Y T +G G +G V K G +I AAK + + V+ +F EI + H
Sbjct: 25 NQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDH 82
Query: 81 INLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHE 140
N++RLY D T LV E G L + + V + I +AY H+
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 141 ECNQRIIHYDIKPANILL--DAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPE 197
+ H D+KP N L D+ S K+ DFGLA P + GTP Y +P+
Sbjct: 142 ---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYVSPQ 195
Query: 198 FLLRNYPITQKCDVYSFGMLLFEII 222
L Y +CD +S G++++ ++
Sbjct: 196 VLEGLY--GPECDEWSAGVMMYVLL 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 125 LDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLA----------KL 174
L I I A + +LH ++ ++H D+KP+NI KV DFGL +
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 175 CNPENTHDSTSGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
P + + G GT Y +PE + NY + K D++S G++LFE++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNY--SHKVDIFSLGLILFELL 270
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 32 LGAGGFGV--VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G+G FGV + + + N + +A K ++ ++++ EI H N+VR
Sbjct: 26 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 90 CYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTARGIAYLHEECN 143
T A+V E+ G L + + F++ E +++L+ G++Y H
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHA--- 132
Query: 144 QRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
++ H D+K N LLD + K+ DFG +K H GTP Y APE LL+
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLK 189
Query: 202 NYPITQKCDVYSFGMLLFEII 222
+ DV+S G+ L+ ++
Sbjct: 190 KEYDGKVADVWSCGVTLYVML 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 32 LGAGGFGVVYKGQFPNG----VKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRL 86
LG G FG V + Q VK+A K+LK + + + F+ E + H ++ +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 87 YGFCY-DQTKAAL-----VYEFMENGSLDKYLFT-----DTEVLKWEKLLDIAIGTARGI 135
G + K L + FM++G L +L + L + L+ + A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 136 AYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSA 195
YL ++ IH D+ N +L + VADFGL++ + + + + A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEIIGR 224
E L N T DV++FG+ ++EI+ R
Sbjct: 208 LESLADNL-YTVHSDVWAFGVTMWEIMTR 235
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLV 84
Y LG G FG V+ + G A KILK + K A + E + + H L
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 214
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L + V E+ G L +L + V ++ + YLH E N
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN- 272
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLRN 202
+++ D+K N++LD K+ DFGL K E D + + GTP Y APE L N
Sbjct: 273 -VVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D + G++++E++
Sbjct: 328 -DYGRAVDWWGLGVVMYEMM 346
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLV 84
Y LG G FG V+ + G A KILK + K A + E + + H L
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L + V E+ G L +L + V ++ + YLH E N
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN- 269
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLRN 202
+++ D+K N++LD K+ DFGL K E D + + GTP Y APE L N
Sbjct: 270 -VVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D + G++++E++
Sbjct: 325 -DYGRAVDWWGLGVVMYEMM 343
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKI-----------LKTCLNKRVEAQFMAEIGTIGRTY 79
LG GGFG V+ G + + +++A K+ L + +E + ++G G
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG-- 96
Query: 80 HINLVRLYGFCYDQTKAALVYEF-MENGSLDKYLFTDTEVLKWEKLLDIAIGTAR----G 134
H ++RL + Q LV E + L Y+ + G +R
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---------LGEGPSRCFFGQ 147
Query: 135 IAYLHEECNQR-IIHYDIKPANILLDAKFS-AKVADFGLAKLCNPENTHDSTSGYRGTPG 192
+ + C+ R ++H DIK NIL+D + AK+ DFG L + E D + GT
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD----FDGTRV 203
Query: 193 YSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
YS PE++ R+ V+S G+LL++++
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMV 233
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 29 STKLGAGGFGVVYKGQFPNGV--KIAAKIL---KTCLNKRVEA----QFMAEIGTIGRTY 79
S LG+G G V K F K+A KI+ K + EA EI + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTAR 133
H ++++ F +D +V E ME G L +K L T L + ++L
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 125
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR-- 188
+ YLHE IIH D+KP N+LL ++ K+ DFG +K+ TS R
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL 176
Query: 189 -GTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
GTP Y APE L+ + D +S G++LF
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 29 STKLGAGGFGVVYKGQFPNGV--KIAAKIL---KTCLNKRVEA----QFMAEIGTIGRTY 79
S LG+G G V K F K+A KI+ K + EA EI + +
Sbjct: 21 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTAR 133
H ++++ F +D +V E ME G L +K L T L + ++L
Sbjct: 80 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 131
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR-- 188
+ YLHE IIH D+KP N+LL ++ K+ DFG +K+ TS R
Sbjct: 132 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL 182
Query: 189 -GTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
GTP Y APE L+ + D +S G++LF
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 29 STKLGAGGFGVVYKGQFPNGV--KIAAKIL---KTCLNKRVEA----QFMAEIGTIGRTY 79
S LG+G G V K F K+A KI+ K + EA EI + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTAR 133
H ++++ F +D +V E ME G L +K L T L + ++L
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 125
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR-- 188
+ YLHE IIH D+KP N+LL ++ K+ DFG +K+ TS R
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL 176
Query: 189 -GTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
GTP Y APE L+ + D +S G++LF
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 29 STKLGAGGFGVVYKGQFPNGV--KIAAKIL---KTCLNKRVEA----QFMAEIGTIGRTY 79
S LG+G G V K F K+A KI+ K + EA EI + +
Sbjct: 14 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTAR 133
H ++++ F +D +V E ME G L +K L T L + ++L
Sbjct: 73 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 124
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR-- 188
+ YLHE IIH D+KP N+LL ++ K+ DFG +K+ TS R
Sbjct: 125 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL 175
Query: 189 -GTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
GTP Y APE L+ + D +S G++LF
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 29 STKLGAGGFGVVYKGQFPNGV--KIAAKIL---KTCLNKRVEA----QFMAEIGTIGRTY 79
S LG+G G V K F K+A KI+ K + EA EI + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 80 HINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEKLLDIAIGTAR 133
H ++++ F +D +V E ME G L +K L T L + ++L
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 125
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYR-- 188
+ YLHE IIH D+KP N+LL ++ K+ DFG +K+ TS R
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL 176
Query: 189 -GTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
GTP Y APE L+ + D +S G++LF
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLV 84
Y LG G FG V+ + G A KILK + K A + E + + H L
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L + V E+ G L +L + V ++ + YLH E N
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN- 131
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLRN 202
+++ D+K N++LD K+ DFGL K E D + + GTP Y APE L N
Sbjct: 132 -VVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D + G++++E++
Sbjct: 187 -DYGRAVDWWGLGVVMYEMM 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLV 84
Y LG G FG V+ + G A KILK + K A + E + + H L
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L + V E+ G L +L + V ++ + YLH E N
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN- 129
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLRN 202
+++ D+K N++LD K+ DFGL K E D + + GTP Y APE L N
Sbjct: 130 -VVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D + G++++E++
Sbjct: 185 -DYGRAVDWWGLGVVMYEMM 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 40/224 (17%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G G VV++G F G +A K ++ C +E + + E H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVIRYY- 93
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL--------LDIAIGTARGIAYLHE 140
C +T +Y +E +L+ +++ + E L + + A G+A+LH
Sbjct: 94 -C-SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 141 ECNQRIIHYDIKPANILL--DAKFSAK-----------VADFGLAKLCNPENT--HDSTS 185
+ +IIH D+KP NIL+ ++F+A ++DFGL K + + +
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 186 GYRGTPGYSAPEFLLRNYP--ITQKCDVYSFGMLLFEIIGRRKN 227
GT G+ APE L + +T+ D++S G + + I+ + K+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 40/224 (17%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G G VV++G F G +A K ++ C +E + + E H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVIRYY- 93
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL--------LDIAIGTARGIAYLHE 140
C +T +Y +E +L+ +++ + E L + + A G+A+LH
Sbjct: 94 -C-SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 141 ECNQRIIHYDIKPANILL--DAKFSAK-----------VADFGLAKLCNPENT--HDSTS 185
+ +IIH D+KP NIL+ ++F+A ++DFGL K + + +
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 186 GYRGTPGYSAPEFLLRNYP--ITQKCDVYSFGMLLFEIIGRRKN 227
GT G+ APE L + +T+ D++S G + + I+ + K+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 28 YSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINLV 84
Y LG G FG V+ + G A KILK + K A + E + + H L
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 85 RLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQ 144
L + V E+ G L +L + V ++ + YLH E N
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN- 130
Query: 145 RIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLRN 202
+++ D+K N++LD K+ DFGL K E D + + GTP Y APE L N
Sbjct: 131 -VVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D + G++++E++
Sbjct: 186 -DYGRAVDWWGLGVVMYEMM 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 13 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 128
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAPEVLED 184
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 185 N-DYGRAVDWWGLGVVMYEMM 204
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 47/310 (15%)
Query: 28 YSTKLGAGGFGVV--YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVR 85
+ KLG GGF V +G +IL R EAQ A++ + H N++R
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILR 90
Query: 86 LYGFCYDQT----KAALVYEFMENGSL---DKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
L +C + +A L+ F + G+L + L L +++L + +G RG+ +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFG-LAKLC-NPENTHDSTS-----GYRGTP 191
H + H D+KP NILL + + D G + + C + E + + + R T
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 192 GYSAPE-FLLRNY-PITQKCDVYSFGMLLFEIIGRRKNAQDCSSDTLDWFPKQVWDE-YE 248
Y APE F ++++ I ++ DV+S G +L+ ++ F + +D ++
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM----------------FGEGPYDMVFQ 251
Query: 249 KGELAAKVL--GCGIEENDREEAERMSMVALWCVQDCPEARPPMSAVVKMLEGGVEIVAP 306
KG+ A + I ++ R + ++ D P RP + ++ LE + P
Sbjct: 252 KGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVD-PHQRPHIPLLLSQLEA----LQP 306
Query: 307 PKPFRYLYSI 316
P P ++ I
Sbjct: 307 PAPGQHTTQI 316
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 180 N-DYGRAVDWWGLGVVMYEMM 199
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 180 N-DYGRAVDWWGLGVVMYEMM 199
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 11 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 126
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAPEVLED 182
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 183 N-DYGRAVDWWGLGVVMYEMM 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 180 N-DYGRAVDWWGLGVVMYEMM 199
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 180 N-DYGRAVDWWGLGVVMYEMM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 27 NYSTKLGAGGFG-VVYKGQFPNGVKIAAKILK--TCLNKRVEAQFMAEIGTIGRTYHINL 83
+Y LG G FG V+ + G A KIL+ + K A + E + T H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
L + V E+ G L +L + V E+ + YLH +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLH---S 123
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHD--STSGYRGTPGYSAPEFLLR 201
+ +++ DIK N++LD K+ DFGL K E D + + GTP Y APE L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 202 NYPITQKCDVYSFGMLLFEII 222
N + D + G++++E++
Sbjct: 180 N-DYGRAVDWWGLGVVMYEMM 199
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 44/228 (19%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G G VV++G F G +A K ++ C +E + + E H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVIRYY- 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL--------LDIAIGTARGIAYLHE 140
C +T +Y +E +L+ +++ + E L + + A G+A+LH
Sbjct: 76 -C-SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 141 ECNQRIIHYDIKPANILLD--AKFSAK-----------VADFGLAKLCNPENTHDSTS-- 185
+ +IIH D+KP NIL+ ++F+A ++DFGL K + + T+
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 186 GYRGTPGYSAPEFLLRN------YPITQKCDVYSFGMLLFEIIGRRKN 227
GT G+ APE L + +T+ D++S G + + I+ + K+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 32 LGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCY 91
+G G FGVV++ + ++A K K +KR + + E+ + H N+V L F Y
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKNR---ELQIMRIVKHPNVVDLKAFFY 102
Query: 92 ------DQTKAALVYEFME----NGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
D+ LV E++ S T + KL + R +AY+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAYIH-- 158
Query: 142 CNQRIIHYDIKPANILLDAKFSA-KVADFGLAK--LCNPENTHDSTSGYRGTPGYSAPEF 198
+ I H DIKP N+LLD K+ DFG AK + N S Y Y APE
Sbjct: 159 -SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPEL 212
Query: 199 LLRNYPITQKCDVYSFGMLLFEII 222
+ T D++S G ++ E++
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELM 236
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFC 90
LG G FG+V++ + K AK +K +V + EI + H N++ L+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK--KEISILNIARHRNILHLHESF 70
Query: 91 YDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
+ +++EF+ + + + T L +++ + +LH + I H+D
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFD 127
Query: 151 IKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQK 208
I+P NI+ + S+ K+ +FG A+ P D+ P Y APE + ++ ++
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPG---DNFRLLFTAPEYYAPE-VHQHDVVSTA 183
Query: 209 CDVYSFGMLLFEIIG 223
D++S G L++ ++
Sbjct: 184 TDMWSLGTLVYVLLS 198
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 70 AEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEK 123
EI + + H ++++ F +D +V E ME G L +K L T L + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 124 LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENT 180
+L + YLHE IIH D+KP N+LL ++ K+ DFG +K+ +
Sbjct: 248 ML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 181 HDSTSGYRGTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
+ GTP Y APE L+ + D +S G++LF
Sbjct: 298 MRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 70 AEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSL------DKYLFTDTEVLKWEK 123
EI + + H ++++ F +D +V E ME G L +K L T L + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 124 LLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFS---AKVADFGLAKLCNPENT 180
+L + YLHE IIH D+KP N+LL ++ K+ DFG +K+ +
Sbjct: 262 ML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 181 HDSTSGYRGTPGYSAPEFLLR--NYPITQKCDVYSFGMLLF 219
+ GTP Y APE L+ + D +S G++LF
Sbjct: 312 MRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 117 EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
+ L E L+ + A+G+ +L +++ IH D+ NILL K K+ DFGLA+
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 177 PENTHDSTSGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ + R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 287
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 117 EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
+ L E L+ + A+G+ +L +++ IH D+ NILL K K+ DFGLA+
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 177 PENTHDSTSGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ + R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 289
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 11 EKPVRFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAK-ILKTCLNKRVE-- 65
E +R + +L + + Y+ + + +G +G V G G+ +A K + T + R
Sbjct: 7 EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 66 -------AQFMAEIGTIGRTYHINLVRLYG-FCYDQTKAA----LVYEFMENGSLDKYLF 113
+ + EI + +H N++ L F + + A LV E M L + +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH 125
Query: 114 TDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK 173
V+ + + G+ LHE ++H D+ P NILL + DF LA+
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 174 LCNPENTHDST-SGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E+T D+ + Y Y APE +++ T+ D++S G ++ E+ R+
Sbjct: 183 ----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 11 EKPVRFTLEQLCSFTNNYSTK--LGAGGFGVVYKGQFPNGVKIAAK-ILKTCLNKRVE-- 65
E +R + +L + + Y+ + + +G +G V G G+ +A K + T + R
Sbjct: 7 EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 66 -------AQFMAEIGTIGRTYHINLVRLYG-FCYDQTKAA----LVYEFMENGSLDKYLF 113
+ + EI + +H N++ L F + + A LV E M L + +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH 125
Query: 114 TDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAK 173
V+ + + G+ LHE ++H D+ P NILL + DF LA+
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 174 LCNPENTHDST-SGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
E+T D+ + Y Y APE +++ T+ D++S G ++ E+ R+
Sbjct: 183 ----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVE-AQFMAEIGTIGRTYHINLVRLYG 88
+G G FG V + N +I A KIL K + KR E A F E + + L+
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG-TARGIAYLHEECNQRII 147
D+ LV ++ G L L + L E + IG I +H+ +
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIGEMVLAIDSIHQ---LHYV 213
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
H DIKP N+LLD ++ADFG N + T S+ GTP Y +PE L
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMG 272
Query: 208 K----CDVYSFGMLLFEII 222
K CD +S G+ ++E++
Sbjct: 273 KYGPECDWWSLGVCMYEML 291
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 117 EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
+ L E L+ + A+G+ +L +++ IH D+ NILL K K+ DFGLA+
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 177 PENTHDSTSGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ + R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 294
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 117 EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
+ L E L+ + A+G+ +L +++ IH D+ NILL K K+ DFGLA+
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 177 PENTHDSTSGYRGTPGYSAPEFLL-RNYPITQKCDVYSFGMLLFEII 222
+ + R + APE + R Y I + DV+SFG+LL+EI
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIF 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVE-AQFMAEIGTIGRTYHINLVRLYG 88
+G G FG V + N +I A KIL K + KR E A F E + + L+
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG-TARGIAYLHEECNQRII 147
D+ LV ++ G L L + L E + IG I +H+ +
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIGEMVLAIDSIHQ---LHYV 197
Query: 148 HYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
H DIKP N+LLD ++ADFG N + T S+ GTP Y +PE L
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMG 256
Query: 208 K----CDVYSFGMLLFEII 222
K CD +S G+ ++E++
Sbjct: 257 KYGPECDWWSLGVCMYEML 275
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+M G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + KVADFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+M G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + KVADFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + + +V +Y Y K L V E ++ G L
Sbjct: 59 KFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGEL 116
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 117 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 167
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 168 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 223
Query: 219 FEII 222
+ ++
Sbjct: 224 YILL 227
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAK--ILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
LG G G VV++G F G +A K ++ C +E + + E H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVIRYY- 75
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL--------LDIAIGTARGIAYLHE 140
C +T +Y +E +L+ +++ + E L + + A G+A+LH
Sbjct: 76 -C-SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 141 ECNQRIIHYDIKPANILLD--AKFSAK-----------VADFGLAKLCNPENT--HDSTS 185
+ +IIH D+KP NIL+ ++F+A ++DFGL K + + +
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 186 GYRGTPGYSAPEFLLRN------YPITQKCDVYSFGMLLFEIIGRRKN 227
GT G+ APE L + +T+ D++S G + + I+ + K+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 28 YSTKLGAGGFGVVYKG---------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT 78
++ LG G F ++KG Q + ++ K+L E+ F A + +
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQL-HETEVLLKVLDKAHRNYSESFFEAA-SMMSKL 69
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H +LV YG C+ + LV EF++ GSLD YL + + L++A A + +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNP--ENTHDSTSGYRGTPGYSAP 196
E +IH ++ NILL + K + KL +P T + + P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEI 221
E + + D +SFG L+EI
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEI 211
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 51 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 108
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 109 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 159
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 160 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 215
Query: 219 FEII 222
+ ++
Sbjct: 216 YILL 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 49 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 106
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 107 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 157
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 158 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 213
Query: 219 FEII 222
+ ++
Sbjct: 214 YILL 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 50 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 107
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 108 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 158
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 159 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 214
Query: 219 FEII 222
+ ++
Sbjct: 215 YILL 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 44 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 101
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 102 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 152
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 153 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 208
Query: 219 FEII 222
+ ++
Sbjct: 209 YILL 212
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 45 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 102
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 103 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 153
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 154 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 209
Query: 219 FEII 222
+ ++
Sbjct: 210 YILL 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 43 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 100
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 101 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 151
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 152 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 207
Query: 219 FEII 222
+ ++
Sbjct: 208 YILL 211
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 32 LGAGGFGV--VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G+G FGV + + + N + +A K ++ ++++ EI H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 90 CYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTARGIAYLHEECN 143
T A+V E+ G L + + F++ E +++L+ G++Y H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHA--- 133
Query: 144 QRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
++ H D+K N LLD + K+ FG +K H GTP Y APE LL+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 202 NYPITQKCDVYSFGMLLFEII 222
+ DV+S G+ L+ ++
Sbjct: 191 KEYDGKVADVWSCGVTLYVML 211
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 89 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 146
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 147 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 197
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 198 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 253
Query: 219 FEII 222
+ ++
Sbjct: 254 YILL 257
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 95 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 152
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 153 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 203
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 204 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 259
Query: 219 FEII 222
+ ++
Sbjct: 260 YILL 263
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 32 LGAGGFGV--VYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
+G+G FGV + + + N + +A K ++ ++++ EI H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 90 CYDQTKAALVYEFMENGSLDKYL-----FTDTEV-LKWEKLLDIAIGTARGIAYLHEECN 143
T A+V E+ G L + + F++ E +++L+ G++Y H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHA--- 133
Query: 144 QRIIHYDIKPANILLDAKFSA--KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
++ H D+K N LLD + K+ FG +K H GTP Y APE LL+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLK 190
Query: 202 NYPITQKCDVYSFGMLLFEII 222
+ DV+S G+ L+ ++
Sbjct: 191 KEYDGKVADVWSCGVTLYVML 211
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 43 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 100
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 101 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 151
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 152 RPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 207
Query: 219 FEII 222
+ ++
Sbjct: 208 YILL 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 29 STKLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTY-HINLVRL 86
S LG G + V NG + A KI++ ++ E+ T+ + + N++ L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHS-RSRVFREVETLYQCQGNKNILEL 76
Query: 87 YGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEE 141
F D T+ LV+E ++ GS+ ++ F + E + + A + +LH
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR------VVRDVAAALDFLH-- 128
Query: 142 CNQRIIHYDIKPANILLDA--KFS-AKVADFGLA---KL---CNPENTHDSTSGYRGTPG 192
+ I H D+KP NIL ++ K S K+ DF L KL C P T + T+ G+
Sbjct: 129 -TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAE 186
Query: 193 YSAPE----FLLRNYPITQKCDVYSFGMLLF 219
Y APE F + ++CD++S G++L+
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K+L+ C R E + + +V +Y Y K L V E ++ G L
Sbjct: 45 KFALKMLQDCPKARREVELHWRASQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGEL 102
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 103 FSRIQDRGDQAFTEREASEIMK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 153
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD++S G+++
Sbjct: 154 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIM 209
Query: 219 FEII 222
+ ++
Sbjct: 210 YILL 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 29/198 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHI------NLVRLYGFCYDQTKAALVYEFM 103
K A +++ C+N+ QF +I + + +L R C+ K + E +
Sbjct: 34 KGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH-MLKHPHIVELL 92
Query: 104 ENGSLDKYLFTDTEVLKWEKL-LDIAIGTARGIAY---------------LHEECNQRII 147
E S D L+ E + L +I G Y L + II
Sbjct: 93 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNII 152
Query: 148 HYDIKPANILLDAKFSA---KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYP 204
H D+KP N+LL +K ++ K+ DFG+A G GTP + APE + R P
Sbjct: 153 HRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKRE-P 209
Query: 205 ITQKCDVYSFGMLLFEII 222
+ DV+ G++LF ++
Sbjct: 210 YGKPVDVWGCGVILFILL 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 117 EVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCN 176
E + E L+ + ARG+ +L +++ IH D+ NILL K+ DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 177 PENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+ R + APE + + K DV+S+G+LL+EI
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIF 295
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 32 LGAGGFGVVYKG------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT-YHINLV 84
LG G FG V + + P +A K+LK M E+ + +H+N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 85 RLYGFCYDQTKAALV-YEFMENGSLDKYL 112
L G C Q +V E+ + G+L YL
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+G+G G+V Y V I K+ + N+ + E+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 89 FCYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
Q LV E M+ +L + + + L E++ + GI +LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAG 146
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y APE +L
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL-G 199
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G ++ E++ +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G+++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G+++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGVIMGEMI 219
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 28 YSTKLGAGGFGVVYKG---------QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRT 78
++ LG G F ++KG Q + ++ K+L E+ F A + +
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQL-HETEVLLKVLDKAHRNYSESFFEAA-SMMSKL 69
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYL 138
H +LV YG C + LV EF++ GSLD YL + + L++A A + +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 139 HEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNP--ENTHDSTSGYRGTPGYSAP 196
E +IH ++ NILL + K + KL +P T + + P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEI 221
E + + D +SFG L+EI
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEI 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
+G G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + KVADFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 32 LGAGGFGVVYKGQFPNGVKI-AAKIL-KTCLNKRVE-AQFMAEIGTIGRTYHINLVRLYG 88
+G G FG V + N K+ A KIL K + KR E A F E + + L+
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKL------LDIAIGTARGIAYLHEEC 142
D LV ++ G L L + L E + IAI + + Y
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY----- 196
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-- 200
+H DIKP NIL+D ++ADFG + T S+ GTP Y +PE L
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAM 251
Query: 201 -----RNYPITQKCDVYSFGMLLFEII 222
R P +CD +S G+ ++E++
Sbjct: 252 EGGKGRYGP---ECDWWSLGVCMYEML 275
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 32 LGAGGFGVVYKGQFPN--GVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLYG 88
+G+G G+V F G+ +A K L + A+ E+ + H N++ L
Sbjct: 30 IGSGAQGIVCAA-FDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 88
Query: 89 FCYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
Q LV E M + +L + + + L E++ + GI +LH
Sbjct: 89 VFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH--- 141
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ IIH D+KP+NI++ + + K+ DFGLA+ +T+ + Y T Y APE +L
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVIL-G 197
Query: 203 YPITQKCDVYSFGMLLFEII 222
+ D++S G ++ E++
Sbjct: 198 MGYKENVDIWSVGCIMGELV 217
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 34/214 (15%)
Query: 32 LGAGGFGVVYK--GQFPNGVKIAAKILKT----CLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG V + G +A KI+K C R E Q + + T V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + +V+E + + D + + + +A + + +LH + +
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNK 138
Query: 146 IIHYDIKPANILL---------------DAKF----SAKVADFGLAKLCNPENTHDSTSG 186
+ H D+KP NIL D + KV DFG A ++ H ST
Sbjct: 139 LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHHST-- 193
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFE 220
T Y APE +L +Q CDV+S G +L E
Sbjct: 194 LVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIE 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 9 AREKPVRFTLEQLCSFTNNYSTKLGAGGFGVVYKG-QFPNGVKIA-AKILKTCLNKRVEA 66
+R++ RF +E++ G G FG V G + G+ +A K+++ + E
Sbjct: 18 SRKEMDRFQVERMA----------GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL 67
Query: 67 QFMAEIGTIGRTYHINLVRLYGFCY-----DQTKAAL--VYEFMENGSLDKYL--FTDTE 117
Q M ++ + +H N+V+L + Y D+ L V E++ + +L + + +
Sbjct: 68 QIMQDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQ 123
Query: 118 VLKWEKLLDIAI-GTARGIAYLHEECNQRIIHYDIKPANILLD-AKFSAKVADFGLAKLC 175
V L+ + + R I LH + + H DIKP N+L++ A + K+ DFG AK
Sbjct: 124 VAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
Query: 176 NPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
+P + Y + Y APE + N T D++S G + E++
Sbjct: 183 SPS---EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+G+G G+V Y V I K+ + N+ + E+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 89 FCYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
Q LV E M+ +L + + + L E++ + GI +LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAG 146
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y APE +L
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL-G 199
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G ++ E++ +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Query: 31 KLGAGGFGVVYKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG-- 88
K+G G +G VYK + +G LK + EI + H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 89 FCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTAR--------GIAYLHE 140
+ K L++++ E+ F +K + + G + GI YLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-KKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 141 ECNQRIIHYDIKPANILL----DAKFSAKVADFGLAKLCN-PENTHDSTSGYRGTPGYSA 195
++H D+KPANIL+ + K+AD G A+L N P T Y A
Sbjct: 147 NW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 196 PEFLLRNYPITQKCDVYSFGMLLFEII 222
PE LL T+ D+++ G + E++
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+G+G G+V Y V I K+ + N+ + E+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 89 FCYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
Q LV E M+ +L + + + L E++ + GI +LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y APE +L
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL-G 199
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G ++ E++ +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 32 LGAGGFGVV---YKGQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYG 88
+G+G G+V Y V I K+ + N+ + E+ + H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 89 FCYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
Q LV E M+ +L + + + L E++ + GI +LH
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAG 139
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y APE +L
Sbjct: 140 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL-G 192
Query: 203 YPITQKCDVYSFGMLLFEIIGRR 225
+ D++S G ++ E++ +
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 72
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E ME T+ L+ E
Sbjct: 73 SG------------VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 121 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 173
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K +E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+++D + KV DFGLAK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YLH + +I+ D+KP N+L+D + KVADFG AK T GTP Y AP
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEI 221
E +L + D ++ G+L++E+
Sbjct: 209 EIILSK-GYNKAVDWWALGVLIYEM 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 50 KIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAAL-VYEFMENGSL 108
K A K L+ C R E + + + +V +Y Y K L V E ++ G L
Sbjct: 89 KFALKXLQDCPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVXECLDGGEL 146
Query: 109 DKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANILLDAK 161
+ FT+ E + K +IG A I YLH + I H D+KP N+L +K
Sbjct: 147 FSRIQDRGDQAFTEREASEIXK----SIGEA--IQYLH---SINIAHRDVKPENLLYTSK 197
Query: 162 FS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLL 218
K+ DFG AK +H+S + TP Y APE +L + CD +S G++
Sbjct: 198 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDXWSLGVIX 253
Query: 219 F 219
+
Sbjct: 254 Y 254
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 30 TKLGAGGFGVVYK--GQFPNGVKIAAKILKTCLN----KRVEAQFMAEIGTIGRTYHINL 83
+ LG G FG V + G ++A KI+K R+E + +I
Sbjct: 39 STLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLC 98
Query: 84 VRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKW--EKLLDIAIGTARGIAYLHEE 141
V+++ + + +E + + D D L + ++ +A + + +LH
Sbjct: 99 VQMFDWFDYHGHMCISFELLGLSTFD--FLKDNNYLPYPIHQVRHMAFQLCQAVKFLH-- 154
Query: 142 CNQRIIHYDIKPANIL-----------LDAK--------FSAKVADFGLAKLCNPENTHD 182
+ ++ H D+KP NIL L+ K + +V DFG A H+
Sbjct: 155 -DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF-----DHE 208
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFE 220
S T Y APE +L +Q CDV+S G ++FE
Sbjct: 209 HHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFE 245
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 193 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQ-FMAEI---GTIGRTYHINLVR 85
K+G+G FG V+K + +G A K K L V+ Q + E+ +G+ H+ VR
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 71
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEK---LLDIAIGTARGIAYLHEEC 142
+ + + E+ GSL + + ++ + K L D+ + RG+ Y+H
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 128
Query: 143 NQRIIHYDIKPANILLDA-------------------KFSAKVADFG-LAKLCNPENTHD 182
+ ++H DIKP+NI + K K+ D G + ++ +P+
Sbjct: 129 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE-- 186
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEIIG 223
G + A E L NY K D+++ + + G
Sbjct: 187 -----EGDSRFLANEVLQENYTHLPKADIFALALTVVXAAG 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 93
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 144
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSK 199
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 200 GY--NKAVDWWALGVLIYEM 217
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 31 KLGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGF 89
KLG G + V++ N K+ KILK +++ + G N++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGP---NIITLADI 100
Query: 90 CYDQTK--AALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIG-----TARGIAYLHEEC 142
D ALV+E + N TD + L ++ L D I + + Y H
Sbjct: 101 VKDPVSRTPALVFEHVNN--------TDFKQL-YQTLTDYDIRFYMYEILKALDYCH--- 148
Query: 143 NQRIIHYDIKPANILLDAKFSA-KVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLR 201
+ I+H D+KP N+++D + ++ D+GLA+ +P ++ R G PE L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVD 205
Query: 202 NYPITQKCDVYSFGMLLFEIIGRRK 226
D++S G +L +I R++
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 32 LGAGGFGVVYKG-QFPNGVKIAAKILKTCLNKRVEAQ-FMAEIGTIGRTYHINLVRLYGF 89
+G+G G+V G+ +A K L + A+ E+ + H N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 90 CYDQ------TKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECN 143
Q LV E M + +L + + + L E++ + GI +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH---S 144
Query: 144 QRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
IIH D+KP+NI++ + + K+ DFGLA+ T+ + Y T Y APE +L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAPEVIL-GM 200
Query: 204 PITQKCDVYSFGMLLFEII 222
D++S G ++ E++
Sbjct: 201 GYAANVDIWSVGCIMGELV 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 32 LGAGGFGVVYKGQ----FPNGVKIAAKILK---------TCLNKRVEAQFMAEIGTIGRT 78
LG G +G V+ + G A K+LK T + R E Q + I
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI-----R 116
Query: 79 YHINLVRLYGFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIG-TA 132
LV L+ +TK L+ +++ G L +L FT+ EV I +G
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV-------QIYVGEIV 169
Query: 133 RGIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPG 192
+ +LH+ II+ DIK NILLD+ + DFGL+K + T + + GT
Sbjct: 170 LALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIE 225
Query: 193 YSAPEFLLRNYPITQKC-DVYSFGMLLFEII 222
Y AP+ + K D +S G+L++E++
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 24/135 (17%)
Query: 98 LVYEFMENGSLDKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
++ E ME G L + FT+ E E + DI GTA I +LH + I H D
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAA--EIMRDI--GTA--IQFLH---SHNIAHRD 153
Query: 151 IKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
+KP N+L +K K+ DFG AK E T ++ TP Y APE +L +
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPE-VLGPEKYDK 208
Query: 208 KCDVYSFGMLLFEII 222
CD++S G++++ ++
Sbjct: 209 SCDMWSLGVIMYILL 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 193 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQ-FMAEI---GTIGRTYHINLVR 85
K+G+G FG V+K + +G A K K L V+ Q + E+ +G+ H+ VR
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 73
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEK---LLDIAIGTARGIAYLHEEC 142
+ + + E+ GSL + + ++ + K L D+ + RG+ Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 130
Query: 143 NQRIIHYDIKPANILLDA-------------------KFSAKVADFG-LAKLCNPENTHD 182
+ ++H DIKP+NI + K K+ D G + ++ +P+
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE-- 188
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGM 216
G + A E L NY K D+++ +
Sbjct: 189 -----EGDSRFLANEVLQENYTHLPKADIFALAL 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 24/135 (17%)
Query: 98 LVYEFMENGSLDKYL-------FTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYD 150
++ E ME G L + FT+ E E + DI GTA I +LH + I H D
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAA--EIMRDI--GTA--IQFLH---SHNIAHRD 134
Query: 151 IKPANILLDAKFS---AKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNYPITQ 207
+KP N+L +K K+ DFG AK E T ++ TP Y APE +L +
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPE-VLGPEKYDK 189
Query: 208 KCDVYSFGMLLFEII 222
CD++S G++++ ++
Sbjct: 190 SCDMWSLGVIMYILL 204
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 191 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 230 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 193 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 230 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+++D + KV DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 192 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQ-FMAEI---GTIGRTYHINLVR 85
K+G+G FG V+K + +G A K K L V+ Q + E+ +G+ H+ VR
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 75
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEK---LLDIAIGTARGIAYLHEEC 142
+ + + E+ GSL + + ++ + K L D+ + RG+ Y+H
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 132
Query: 143 NQRIIHYDIKPANILLDA-------------------KFSAKVADFG-LAKLCNPENTHD 182
+ ++H DIKP+NI + K K+ D G + ++ +P+
Sbjct: 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE-- 190
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGM 216
G + A E L NY K D+++ +
Sbjct: 191 -----EGDSRFLANEVLQENYTHLPKADIFALAL 219
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 31 KLGAGGFGVVYK-GQFPNGVKIAAKILKTCLNKRVEAQ-FMAEI---GTIGRTYHINLVR 85
K+G+G FG V+K + +G A K K L V+ Q + E+ +G+ H+ VR
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 73
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEK---LLDIAIGTARGIAYLHEEC 142
+ + + E+ GSL + + ++ + K L D+ + RG+ Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 130
Query: 143 NQRIIHYDIKPANILLDA-------------------KFSAKVADFG-LAKLCNPENTHD 182
+ ++H DIKP+NI + K K+ D G + ++ +P+
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE-- 188
Query: 183 STSGYRGTPGYSAPEFLLRNYPITQKCDVYSFGM 216
G + A E L NY K D+++ +
Sbjct: 189 -----EGDSRFLANEVLQENYTHLPKADIFALAL 217
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 186 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 185 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K +E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+++D + +V DFGLAK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE-HTLNEKRILQAVNFPFLVKLE 128
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 179
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK +T GTP Y APE +L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSK 234
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 235 GY--NKAVDWWALGVLIYEM 252
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 41/197 (20%)
Query: 43 GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEF 102
G++ ++ +LK K E +F+ + + +H ++ + T +EF
Sbjct: 57 GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNT-----FEF 111
Query: 103 MENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANIL-LDAK 161
++ + Y +A + +LHE ++ H D+KP NIL ++++
Sbjct: 112 LKENNFQPYPLPHVR--------HMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSE 160
Query: 162 F------------------SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
F S +VADFG A H+ + T Y PE +L
Sbjct: 161 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 214
Query: 204 PITQKCDVYSFGMLLFE 220
Q CDV+S G +LFE
Sbjct: 215 GWAQPCDVWSIGCILFE 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 186 RAPEVIL-GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 41/197 (20%)
Query: 43 GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEF 102
G++ ++ +LK K E +F+ + + +H ++ + T +EF
Sbjct: 66 GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNT-----FEF 120
Query: 103 MENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANIL-LDAK 161
++ + Y +A + +LHE ++ H D+KP NIL ++++
Sbjct: 121 LKENNFQPYPLPHVR--------HMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSE 169
Query: 162 F------------------SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
F S +VADFG A H+ + T Y PE +L
Sbjct: 170 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 223
Query: 204 PITQKCDVYSFGMLLFE 220
Q CDV+S G +LFE
Sbjct: 224 GWAQPCDVWSIGCILFE 240
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 41/197 (20%)
Query: 43 GQFPNGVKIAAKILKTCLNKRVEAQFMAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEF 102
G++ ++ +LK K E +F+ + + +H ++ + T +EF
Sbjct: 89 GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNT-----FEF 143
Query: 103 MENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANIL-LDAK 161
++ + Y +A + +LHE ++ H D+KP NIL ++++
Sbjct: 144 LKENNFQPYPLPHVR--------HMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSE 192
Query: 162 F------------------SAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRNY 203
F S +VADFG A H+ + T Y PE +L
Sbjct: 193 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 246
Query: 204 PITQKCDVYSFGMLLFE 220
Q CDV+S G +LFE
Sbjct: 247 GWAQPCDVWSIGCILFE 263
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 215 -GYNKAVDWWALGVLIYEM 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE-HTLNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 34/214 (15%)
Query: 32 LGAGGFGVVYK--GQFPNGVKIAAKILKT----CLNKRVEAQFMAEIGTIGRTYHINLVR 85
LG G FG V + G +A KI+K C R E Q + + T V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 86 LYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQR 145
+ + +V+E + + D + + + +A + + +LH + +
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNK 138
Query: 146 IIHYDIKPANILL---------------DAKF----SAKVADFGLAKLCNPENTHDSTSG 186
+ H D+KP NIL D + KV DFG A ++ H ST
Sbjct: 139 LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHHST-- 193
Query: 187 YRGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFE 220
Y APE +L +Q CDV+S G +L E
Sbjct: 194 LVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIE 226
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 197 RAPEVIL-GMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+++D + KV DFG AK T GTP Y APE +L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 214 GY--NKAVDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 100
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 151
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 206
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 207 GY--NKAVDWWALGVLIYEM 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + Y T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEIIGRR 225
APE +L + D++S G ++ E++ +
Sbjct: 186 RAPEVIL-GMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 94
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 145
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 200
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 201 -GYNKAVDWWALGVLIYEM 218
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 215 GY--NKAVDWWALGVLIYEM 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 128
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 179
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 234
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 235 GY--NKAVDWWALGVLIYEM 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIA--------YLH 139
D + +V E++ G + +L ++ A AR A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHL---------RRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 140 EECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFL 199
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 200 LRNYPITQKCDVYSFGMLLFEI 221
L + D ++ G+L++E+
Sbjct: 211 LSK-GYNKAVDWWALGVLIYEM 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E+ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+++D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YLH + +I+ D+KP N+++D + KV DFG AK T GTP Y AP
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 197 EFLLRNYPITQKCDVYSFGMLLFEI 221
E +L + D ++ G+L++E+
Sbjct: 209 EIILSK-GYNKAVDWWALGVLIYEM 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YLH + +I+ D+KP N+++D + KV DFG AK T GTP Y AP
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 197 EFLL-RNYPITQKCDVYSFGMLLFEI 221
E +L + Y + D ++ G+L++E+
Sbjct: 209 EIILSKGY--NKAVDWWALGVLIYEM 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YLH + +I+ D+KP N+++D + KV DFG AK T GTP Y AP
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 197 EFLL-RNYPITQKCDVYSFGMLLFEI 221
E +L + Y + D ++ G+L++E+
Sbjct: 209 EIILSKGY--NKAVDWWALGVLIYEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 137 YLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAP 196
YLH + +I+ D+KP N+++D + KV DFG AK T GTP Y AP
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 197 EFLL-RNYPITQKCDVYSFGMLLFEI 221
E +L + Y + D ++ G+L++E+
Sbjct: 209 EIILSKGY--NKAVDWWALGVLIYEM 232
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 68
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 69 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 117 WQVLEAVRHCH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 169
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 102
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 153
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 208
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 209 -GYNKAVDWWALGVLIYEM 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++E+
Sbjct: 214 -GYNKAVDWWALGVLIYEM 231
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 134 GIAYLHEECNQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGY 193
GI +LH + IIH D+KP+NI++ + + K+ DFGLA+ T + T Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 194 SAPEFLLRNYPITQKCDVYSFGMLLFEII 222
APE +L + D++S G ++ E+I
Sbjct: 194 RAPEVIL-GMGYKENVDIWSVGCIMGEMI 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE-HTLNEKRILQAVNFPFLVKLE 128
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 179
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 234
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 235 GY--NKAVDWWALGVLIYEM 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ G A KIL K K++E + E + LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 100
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F + + A YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 151
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLL-R 201
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 206
Query: 202 NYPITQKCDVYSFGMLLFEI 221
Y + D ++ G+L++E+
Sbjct: 207 GY--NKAVDWWALGVLIYEM 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 73
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 74 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 122 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 174
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 98 LVYEFMENGSLDKYLFTDTEVLKWEKLLDIAIGTARGIAYLHEECNQRIIHYDIKPANIL 157
LV+E M GS+ ++ + E + + A + +LH N+ I H D+KP NIL
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 158 LDAKFS---AKVADFGLA---KL---CNPENTHDSTSGYRGTPGYSAPE----FLLRNYP 204
+ K+ DFGL KL C+P +T + + G+ Y APE F
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC-GSAEYMAPEVVEAFSEEASI 202
Query: 205 ITQKCDVYSFGMLLFEII 222
++CD++S G++L+ ++
Sbjct: 203 YDKRCDLWSLGVILYILL 220
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 107
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 108 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 156 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 208
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 88
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 89 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 137 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 189
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 32 LGAGGFG-VVYKGQFPNGVKIAAKIL---KTCLNKRVEAQFMAEIGTIGRTYHINLVRLY 87
LG G FG V+ +G A KIL K K++E + E + LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 88 GFCYDQTKAALVYEFMENGSLDKYL-----FTDTEVLKWEKLLDIAIGTARGIAYLHEEC 142
D + +V E++ G + +L F++ + A YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 143 NQRIIHYDIKPANILLDAKFSAKVADFGLAKLCNPENTHDSTSGYRGTPGYSAPEFLLRN 202
+ +I+ D+KP N+L+D + +V DFG AK T GTP Y APE +L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 203 YPITQKCDVYSFGMLLFEI 221
+ D ++ G+L++++
Sbjct: 214 -GYNKAVDWWALGVLIYQM 231
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 73
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 74 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 122 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 174
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 72
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 73 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 121 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 173
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 73
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 74 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 122 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 174
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 32 LGAGGFGVVYKG-----------------------QFPNGVKIAAKILKTCLNKRVEAQF 68
LG+GGFG VY G + PNG ++ +++ L K+V + F
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---LLKKVSSGF 88
Query: 69 MAEIGTIGRTYHINLVRLYGFCYDQTKAALVYEFMENGSLDKYLFTDTEVLKWEKLLDIA 128
++RL + L+ E E T+ L+ E
Sbjct: 89 SG------------VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 129 IGTARGIAYLHEECNQRIIHYDIKPANILLDA-KFSAKVADFGLAKLCNPENTHDSTSGY 187
+ + H N ++H DIK NIL+D + K+ DFG L D +
Sbjct: 137 WQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----F 189
Query: 188 RGTPGYSAPEFLLRNYPITQKCDVYSFGMLLFEII 222
GT YS PE++ + + V+S G+LL++++
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,498,860
Number of Sequences: 62578
Number of extensions: 490683
Number of successful extensions: 3560
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 1154
length of query: 369
length of database: 14,973,337
effective HSP length: 100
effective length of query: 269
effective length of database: 8,715,537
effective search space: 2344479453
effective search space used: 2344479453
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)