Query 017592
Match_columns 369
No_of_seqs 142 out of 1551
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 09:57:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 2.8E-50 6.1E-55 355.5 23.5 341 7-360 177-527 (528)
2 KOG0569 Permease of the major 100.0 2.8E-39 6E-44 305.0 22.7 323 7-368 125-470 (485)
3 TIGR01299 synapt_SV2 synaptic 100.0 6.2E-38 1.3E-42 313.2 28.6 349 7-360 264-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-36 3.1E-41 297.1 25.6 326 8-366 125-502 (502)
5 TIGR00898 2A0119 cation transp 100.0 1.7E-32 3.6E-37 268.8 29.7 311 7-363 189-505 (505)
6 PF00083 Sugar_tr: Sugar (and 100.0 7.9E-39 1.7E-43 309.1 -19.3 323 7-367 111-451 (451)
7 KOG0254 Predicted transporter 100.0 1.1E-32 2.5E-37 269.9 20.8 322 7-365 151-496 (513)
8 KOG0255 Synaptic vesicle trans 100.0 9.4E-30 2E-34 250.2 27.5 320 9-368 182-508 (521)
9 KOG0252 Inorganic phosphate tr 100.0 1.3E-30 2.8E-35 237.8 7.2 331 4-368 152-513 (538)
10 PRK10077 xylE D-xylose transpo 100.0 2.5E-28 5.4E-33 237.6 23.0 320 8-368 130-473 (479)
11 PRK10642 proline/glycine betai 100.0 7.9E-27 1.7E-31 227.7 29.1 297 8-362 128-439 (490)
12 TIGR00879 SP MFS transporter, 99.9 8.2E-25 1.8E-29 211.8 21.4 327 7-362 136-480 (481)
13 PRK09952 shikimate transporter 99.9 1.4E-23 3E-28 202.0 28.1 284 8-356 135-436 (438)
14 PRK10406 alpha-ketoglutarate t 99.9 8.5E-23 1.8E-27 196.3 28.8 281 8-361 134-431 (432)
15 TIGR00903 2A0129 major facilit 99.9 2.1E-21 4.5E-26 182.2 26.2 268 8-350 89-363 (368)
16 PRK11551 putative 3-hydroxyphe 99.9 2.5E-19 5.5E-24 170.6 28.4 279 7-351 112-395 (406)
17 PRK15075 citrate-proton sympor 99.9 2.7E-19 5.9E-24 172.1 28.5 255 7-329 126-396 (434)
18 PRK12307 putative sialic acid 99.9 2.8E-19 6.2E-24 171.4 26.3 266 7-329 115-385 (426)
19 TIGR00895 2A0115 benzoate tran 99.8 7.6E-19 1.6E-23 166.2 26.5 280 7-324 114-397 (398)
20 PRK10489 enterobactin exporter 99.8 1.8E-18 3.8E-23 165.5 26.1 288 14-369 129-416 (417)
21 TIGR00891 2A0112 putative sial 99.8 1.2E-18 2.7E-23 165.3 23.7 278 7-329 109-392 (405)
22 TIGR02332 HpaX 4-hydroxyphenyl 99.8 6.6E-18 1.4E-22 161.3 24.5 279 7-329 105-397 (412)
23 PRK11663 regulatory protein Uh 99.8 1.7E-17 3.6E-22 159.7 25.9 294 14-358 130-430 (434)
24 TIGR00883 2A0106 metabolite-pr 99.8 4.2E-17 9.1E-22 153.9 24.3 257 7-329 105-377 (394)
25 PRK03893 putative sialic acid 99.8 4E-17 8.6E-22 159.7 24.4 309 7-339 117-440 (496)
26 TIGR00893 2A0114 d-galactonate 99.8 6.3E-17 1.4E-21 152.5 23.4 294 7-349 91-396 (399)
27 COG2271 UhpC Sugar phosphate p 99.7 4.4E-17 9.5E-22 148.8 16.6 284 14-350 136-432 (448)
28 PRK09556 uhpT sugar phosphate 99.7 7.3E-17 1.6E-21 156.7 18.8 299 8-356 132-454 (467)
29 PRK11273 glpT sn-glycerol-3-ph 99.7 5.2E-16 1.1E-20 150.1 24.1 300 8-358 130-442 (452)
30 PRK11010 ampG muropeptide tran 99.7 1.3E-14 2.7E-19 141.7 31.0 273 14-355 126-405 (491)
31 TIGR00712 glpT glycerol-3-phos 99.7 9.1E-16 2E-20 147.8 22.3 293 14-357 137-438 (438)
32 PRK05122 major facilitator sup 99.7 7.2E-15 1.6E-19 139.7 27.2 275 7-362 121-398 (399)
33 PRK03545 putative arabinose tr 99.7 7.5E-15 1.6E-19 139.3 27.1 269 8-352 107-380 (390)
34 TIGR00899 2A0120 sugar efflux 99.7 2.1E-14 4.6E-19 135.0 27.5 262 14-349 106-371 (375)
35 TIGR00894 2A0114euk Na(+)-depe 99.7 1.3E-14 2.9E-19 140.8 25.6 289 8-350 141-448 (465)
36 TIGR00890 2A0111 Oxalate/Forma 99.7 5.2E-15 1.1E-19 138.8 21.4 269 7-344 100-374 (377)
37 PLN00028 nitrate transmembrane 99.7 1.2E-14 2.7E-19 141.3 23.4 280 8-351 134-432 (476)
38 cd06174 MFS The Major Facilita 99.7 2.4E-14 5.1E-19 132.8 24.3 250 7-349 96-349 (352)
39 TIGR00901 2A0125 AmpG-related 99.7 2.1E-14 4.5E-19 134.4 23.0 232 14-310 102-354 (356)
40 PRK15011 sugar efflux transpor 99.7 4.3E-14 9.2E-19 134.3 25.4 267 14-355 124-393 (393)
41 PRK12382 putative transporter; 99.7 4.7E-14 1E-18 133.8 25.6 265 7-351 121-388 (392)
42 PRK03699 putative transporter; 99.7 2.6E-14 5.6E-19 135.8 23.4 269 8-349 105-377 (394)
43 PRK09705 cynX putative cyanate 99.7 6.3E-14 1.4E-18 133.1 25.6 277 7-360 106-389 (393)
44 TIGR00900 2A0121 H+ Antiporter 99.6 3.8E-14 8.2E-19 132.4 22.9 255 8-327 102-363 (365)
45 PRK11902 ampG muropeptide tran 99.6 1.1E-12 2.4E-17 124.9 30.5 267 14-351 113-389 (402)
46 TIGR00881 2A0104 phosphoglycer 99.6 5.7E-14 1.2E-18 131.8 19.6 273 7-329 92-374 (379)
47 COG2814 AraJ Arabinose efflux 99.6 8.5E-13 1.8E-17 122.1 25.9 263 14-350 120-384 (394)
48 TIGR00897 2A0118 polyol permea 99.6 2.8E-12 6E-17 122.2 28.5 273 9-350 116-399 (402)
49 PRK10504 putative transporter; 99.6 4.4E-12 9.6E-17 123.3 29.3 296 7-327 107-415 (471)
50 PRK10473 multidrug efflux syst 99.6 4E-12 8.6E-17 120.6 27.6 78 8-85 101-182 (392)
51 PRK09874 drug efflux system pr 99.6 1.1E-12 2.3E-17 125.0 23.7 275 8-351 117-397 (408)
52 TIGR00711 efflux_EmrB drug res 99.6 1.5E-12 3.2E-17 127.0 25.1 286 7-326 99-409 (485)
53 TIGR00710 efflux_Bcr_CflA drug 99.6 4.5E-12 9.8E-17 119.5 27.1 244 7-320 102-355 (385)
54 PRK08633 2-acyl-glycerophospho 99.5 1.5E-12 3.2E-17 140.0 25.9 255 7-324 112-381 (1146)
55 PF07690 MFS_1: Major Facilita 99.5 2.7E-13 5.8E-18 126.1 17.5 250 7-318 94-352 (352)
56 PRK10213 nepI ribonucleoside t 99.5 5.7E-12 1.2E-16 119.7 26.7 79 7-85 117-199 (394)
57 PRK15034 nitrate/nitrite trans 99.5 3.3E-12 7.1E-17 121.9 23.6 268 7-351 137-453 (462)
58 PRK11195 lysophospholipid tran 99.5 6.9E-12 1.5E-16 119.1 25.1 288 7-361 97-390 (393)
59 PRK11102 bicyclomycin/multidru 99.5 1E-11 2.2E-16 117.0 25.5 78 8-85 89-170 (377)
60 PRK10091 MFS transport protein 99.5 1.1E-11 2.3E-16 117.4 25.1 79 7-85 100-182 (382)
61 PRK15402 multidrug efflux syst 99.5 5.6E-11 1.2E-15 113.3 28.4 78 8-85 111-192 (406)
62 TIGR00792 gph sugar (Glycoside 99.5 1.4E-11 3E-16 118.6 23.4 244 16-327 120-380 (437)
63 KOG2533 Permease of the major 99.5 2.1E-12 4.6E-17 124.3 17.4 258 14-322 153-425 (495)
64 PRK11043 putative transporter; 99.5 9.9E-11 2.2E-15 111.4 28.9 245 8-327 104-357 (401)
65 TIGR02718 sider_RhtX_FptX side 99.5 8.6E-11 1.9E-15 111.4 27.9 257 18-345 120-384 (390)
66 TIGR00889 2A0110 nucleoside tr 99.5 6E-11 1.3E-15 113.6 26.9 146 218-363 257-413 (418)
67 COG2223 NarK Nitrate/nitrite t 99.5 5.2E-12 1.1E-16 115.9 18.2 271 6-351 113-400 (417)
68 TIGR00892 2A0113 monocarboxyla 99.4 5.5E-12 1.2E-16 122.1 18.9 287 8-344 118-413 (455)
69 PRK09528 lacY galactoside perm 99.4 4.8E-11 1E-15 114.3 23.1 135 220-354 270-405 (420)
70 TIGR00886 2A0108 nitrite extru 99.4 3.2E-12 6.8E-17 119.9 14.7 94 219-313 268-365 (366)
71 PRK06814 acylglycerophosphoeth 99.4 3.5E-11 7.6E-16 129.3 24.2 256 7-326 117-395 (1140)
72 KOG2532 Permease of the major 99.4 4.2E-11 9.1E-16 115.0 21.2 288 9-351 139-446 (466)
73 PF11700 ATG22: Vacuole efflux 99.4 1.3E-09 2.8E-14 105.4 31.0 146 213-359 318-474 (477)
74 PRK11646 multidrug resistance 99.4 1.2E-10 2.6E-15 110.9 23.6 76 7-83 108-187 (400)
75 TIGR00902 2A0127 phenyl propri 99.4 4.2E-10 9.1E-15 106.5 26.7 127 219-347 247-374 (382)
76 PRK14995 methyl viologen resis 99.4 2.7E-10 5.8E-15 111.6 26.0 295 6-325 102-411 (495)
77 PRK03633 putative MFS family t 99.3 1.5E-09 3.3E-14 102.6 27.6 123 220-345 243-365 (381)
78 PRK10054 putative transporter; 99.3 7.7E-10 1.7E-14 105.2 25.0 263 14-348 115-380 (395)
79 TIGR00882 2A0105 oligosacchari 99.3 1.3E-09 2.9E-14 103.5 26.6 131 220-350 262-393 (396)
80 TIGR00885 fucP L-fucose:H+ sym 99.3 9E-10 2E-14 105.2 25.2 102 223-327 280-381 (410)
81 PRK11128 putative 3-phenylprop 99.3 9.2E-10 2E-14 104.1 24.8 124 220-345 248-372 (382)
82 TIGR01272 gluP glucose/galacto 99.3 1.6E-09 3.4E-14 99.5 25.5 114 219-335 185-298 (310)
83 PRK10133 L-fucose transporter; 99.3 1.9E-09 4.2E-14 103.8 26.9 116 218-336 301-417 (438)
84 TIGR00880 2_A_01_02 Multidrug 99.3 1.4E-10 3E-15 92.5 15.3 133 223-355 9-141 (141)
85 PRK11652 emrD multidrug resist 99.3 3.8E-09 8.3E-14 100.2 26.6 78 8-85 106-187 (394)
86 TIGR00896 CynX cyanate transpo 99.3 6E-10 1.3E-14 104.2 20.2 247 8-329 97-350 (355)
87 PRK11551 putative 3-hydroxyphe 99.3 4.9E-10 1.1E-14 106.7 19.8 139 218-356 56-194 (406)
88 TIGR00710 efflux_Bcr_CflA drug 99.3 5.4E-10 1.2E-14 105.4 19.5 141 218-358 46-186 (385)
89 PLN00028 nitrate transmembrane 99.3 9.6E-10 2.1E-14 107.1 21.5 181 162-354 32-221 (476)
90 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1E-09 2.2E-14 104.9 21.1 139 219-357 50-194 (412)
91 TIGR00895 2A0115 benzoate tran 99.2 3.1E-10 6.7E-15 107.2 16.7 138 219-356 59-196 (398)
92 PF05977 MFS_3: Transmembrane 99.2 6.3E-09 1.4E-13 101.7 25.9 278 14-357 122-400 (524)
93 PRK15402 multidrug efflux syst 99.2 1E-09 2.2E-14 104.6 20.0 140 219-358 55-194 (406)
94 PRK15403 multidrug efflux syst 99.2 8.4E-09 1.8E-13 98.7 25.9 78 8-85 114-195 (413)
95 TIGR01299 synapt_SV2 synaptic 99.2 1.5E-09 3.2E-14 109.9 21.4 107 219-325 209-315 (742)
96 PRK10473 multidrug efflux syst 99.2 1.3E-09 2.9E-14 103.3 20.0 140 219-358 45-184 (392)
97 PF07690 MFS_1: Major Facilita 99.2 2.7E-09 5.8E-14 99.1 21.3 140 217-356 37-176 (352)
98 PRK10213 nepI ribonucleoside t 99.2 3.2E-09 6.9E-14 100.9 21.6 138 220-357 63-200 (394)
99 PRK15403 multidrug efflux syst 99.2 2.1E-09 4.5E-14 102.8 20.2 138 220-357 59-196 (413)
100 TIGR00893 2A0114 d-galactonate 99.2 6.9E-10 1.5E-14 104.4 16.6 140 218-357 35-174 (399)
101 PRK10054 putative transporter; 99.2 2.2E-09 4.7E-14 102.1 19.6 136 220-356 51-186 (395)
102 PRK11663 regulatory protein Uh 99.2 2.2E-09 4.7E-14 103.4 19.8 137 219-355 65-201 (434)
103 PRK10504 putative transporter; 99.2 3.5E-09 7.7E-14 103.0 21.3 181 165-356 9-189 (471)
104 PRK03893 putative sialic acid 99.2 2.5E-09 5.4E-14 104.7 20.2 182 163-356 17-198 (496)
105 PRK15462 dipeptide/tripeptide 99.2 2.2E-09 4.7E-14 103.8 19.2 166 169-345 12-182 (493)
106 TIGR00711 efflux_EmrB drug res 99.2 1.9E-09 4E-14 105.2 18.7 140 218-357 43-182 (485)
107 TIGR00891 2A0112 putative sial 99.2 3.7E-09 8E-14 100.2 20.2 180 165-356 11-192 (405)
108 KOG2504 Monocarboxylate transp 99.2 1.1E-09 2.3E-14 106.6 16.6 318 7-351 144-475 (509)
109 PRK12307 putative sialic acid 99.2 3.1E-09 6.7E-14 101.9 19.1 119 218-336 59-177 (426)
110 PRK03699 putative transporter; 99.1 8.3E-09 1.8E-13 98.1 21.7 129 219-347 49-178 (394)
111 PRK03545 putative arabinose tr 99.1 7.6E-09 1.6E-13 98.1 21.1 137 220-356 52-188 (390)
112 TIGR00788 fbt folate/biopterin 99.1 6.6E-09 1.4E-13 100.9 19.3 112 218-329 294-415 (468)
113 TIGR00900 2A0121 H+ Antiporter 99.1 2.1E-08 4.5E-13 93.6 21.2 137 219-355 41-183 (365)
114 PRK11273 glpT sn-glycerol-3-ph 99.1 1.5E-08 3.3E-13 98.1 20.9 139 218-356 69-212 (452)
115 PRK11102 bicyclomycin/multidru 99.1 7E-09 1.5E-13 97.7 17.8 139 219-357 33-171 (377)
116 PRK14995 methyl viologen resis 99.1 2.8E-08 6E-13 97.4 22.2 138 220-357 49-187 (495)
117 PRK09669 putative symporter Ya 99.1 6.8E-08 1.5E-12 93.3 24.4 106 222-327 274-388 (444)
118 PRK11652 emrD multidrug resist 99.1 2.5E-08 5.5E-13 94.6 20.5 140 218-357 49-188 (394)
119 TIGR00881 2A0104 phosphoglycer 99.0 1.9E-09 4E-14 101.1 12.4 139 218-356 36-175 (379)
120 TIGR00712 glpT glycerol-3-phos 99.0 1.9E-08 4.1E-13 97.0 19.4 139 218-356 67-210 (438)
121 PRK09874 drug efflux system pr 99.0 2.6E-08 5.6E-13 94.8 19.6 135 220-355 62-196 (408)
122 TIGR00886 2A0108 nitrite extru 99.0 3.1E-08 6.7E-13 92.8 19.5 108 218-326 43-151 (366)
123 PRK10091 MFS transport protein 99.0 3.4E-08 7.4E-13 93.4 19.9 138 219-356 45-182 (382)
124 PRK10429 melibiose:sodium symp 99.0 1E-07 2.2E-12 92.9 23.3 107 220-326 274-392 (473)
125 TIGR00903 2A0129 major facilit 99.0 2.8E-08 6.1E-13 93.5 18.7 136 220-356 34-169 (368)
126 TIGR00924 yjdL_sub1_fam amino 99.0 3.7E-08 8.1E-13 95.9 19.7 171 169-347 13-187 (475)
127 TIGR00887 2A0109 phosphate:H+ 99.0 7E-08 1.5E-12 94.7 21.6 107 218-324 62-174 (502)
128 cd06174 MFS The Major Facilita 99.0 3.2E-08 6.9E-13 91.6 17.5 131 218-348 40-170 (352)
129 PRK15034 nitrate/nitrite trans 99.0 1.3E-07 2.9E-12 90.5 22.0 136 219-355 77-235 (462)
130 PRK11646 multidrug resistance 99.0 9.8E-08 2.1E-12 90.9 20.8 133 222-355 56-188 (400)
131 TIGR00924 yjdL_sub1_fam amino 99.0 6.4E-07 1.4E-11 87.2 26.9 71 7-77 111-187 (475)
132 PRK11043 putative transporter; 99.0 1E-07 2.3E-12 90.6 20.4 136 219-354 48-183 (401)
133 PRK11462 putative transporter; 99.0 3.5E-07 7.6E-12 88.7 24.3 107 220-326 271-386 (460)
134 TIGR00890 2A0111 Oxalate/Forma 99.0 2.9E-08 6.3E-13 92.9 16.3 134 218-352 44-177 (377)
135 PF13347 MFS_2: MFS/sugar tran 99.0 1.8E-07 3.9E-12 89.9 22.0 240 17-326 125-383 (428)
136 KOG1330 Sugar transporter/spin 98.9 2E-09 4.4E-14 100.0 7.8 79 7-85 130-213 (493)
137 PF03825 Nuc_H_symport: Nucleo 98.9 2.1E-06 4.6E-11 81.4 28.5 137 219-355 250-398 (400)
138 COG2270 Permeases of the major 98.9 4.3E-07 9.4E-12 84.0 22.3 147 212-359 288-435 (438)
139 TIGR01301 GPH_sucrose GPH fami 98.9 1.2E-06 2.6E-11 84.6 26.4 139 219-357 312-476 (477)
140 PRK10642 proline/glycine betai 98.9 2.2E-07 4.8E-12 90.9 22.0 134 222-356 67-216 (490)
141 PRK10207 dipeptide/tripeptide 98.9 1.1E-07 2.4E-12 92.8 19.1 163 165-337 13-179 (489)
142 COG2807 CynX Cyanate permease 98.9 7.9E-07 1.7E-11 80.7 21.8 259 14-348 118-381 (395)
143 KOG0255 Synaptic vesicle trans 98.9 5.2E-08 1.1E-12 96.1 15.4 136 217-356 123-258 (521)
144 TIGR00898 2A0119 cation transp 98.9 7.3E-08 1.6E-12 94.6 16.0 134 218-355 133-266 (505)
145 TIGR00894 2A0114euk Na(+)-depe 98.9 8.4E-08 1.8E-12 93.2 16.3 136 220-355 84-222 (465)
146 PRK10406 alpha-ketoglutarate t 98.8 5E-07 1.1E-11 87.0 21.0 134 222-356 73-222 (432)
147 PRK10489 enterobactin exporter 98.8 3.1E-07 6.8E-12 87.9 19.4 138 218-356 58-200 (417)
148 TIGR00879 SP MFS transporter, 98.8 1.4E-07 3E-12 91.3 17.1 138 218-356 77-220 (481)
149 PRK10077 xylE D-xylose transpo 98.8 2.1E-07 4.6E-12 90.6 18.5 138 218-356 61-218 (479)
150 PRK11195 lysophospholipid tran 98.8 3.8E-07 8.2E-12 86.7 19.7 133 219-356 45-177 (393)
151 PRK15075 citrate-proton sympor 98.8 6E-07 1.3E-11 86.5 20.8 99 225-323 69-175 (434)
152 PF06609 TRI12: Fungal trichot 98.8 1.1E-06 2.3E-11 86.5 22.3 101 220-320 357-460 (599)
153 PRK05122 major facilitator sup 98.8 3E-07 6.4E-12 87.4 18.0 118 219-336 58-183 (399)
154 PRK03633 putative MFS family t 98.8 7.3E-07 1.6E-11 84.3 20.4 109 218-326 47-155 (381)
155 TIGR00892 2A0113 monocarboxyla 98.8 3.2E-07 6.9E-12 89.0 18.2 128 223-351 65-193 (455)
156 COG2271 UhpC Sugar phosphate p 98.8 1.2E-07 2.6E-12 87.6 14.0 140 221-360 73-217 (448)
157 KOG2615 Permease of the major 98.8 3.4E-08 7.4E-13 89.7 10.2 104 221-326 77-181 (451)
158 TIGR00897 2A0118 polyol permea 98.8 6.1E-07 1.3E-11 85.5 19.5 112 218-329 54-170 (402)
159 PRK09556 uhpT sugar phosphate 98.8 1.6E-07 3.4E-12 91.4 15.6 132 220-351 72-211 (467)
160 TIGR00805 oat sodium-independe 98.8 1.1E-07 2.5E-12 95.5 14.9 78 7-84 181-283 (633)
161 PTZ00207 hypothetical protein; 98.8 3.8E-06 8.3E-11 83.0 24.9 97 8-106 130-232 (591)
162 PF01306 LacY_symp: LacY proto 98.8 7.7E-06 1.7E-10 77.0 25.7 141 219-359 266-407 (412)
163 PRK09584 tppB putative tripept 98.8 7.7E-07 1.7E-11 87.3 19.6 166 168-343 23-192 (500)
164 TIGR00885 fucP L-fucose:H+ sym 98.8 1.6E-06 3.4E-11 83.0 21.2 108 218-325 44-154 (410)
165 TIGR00899 2A0120 sugar efflux 98.8 1.1E-06 2.4E-11 82.5 20.0 137 220-356 41-180 (375)
166 COG2814 AraJ Arabinose efflux 98.8 1.6E-06 3.5E-11 80.7 20.2 135 219-353 55-189 (394)
167 PRK09584 tppB putative tripept 98.8 1.3E-06 2.8E-11 85.7 20.8 68 7-74 121-193 (500)
168 PRK09705 cynX putative cyanate 98.8 1.1E-06 2.3E-11 83.6 19.7 123 220-343 52-175 (393)
169 PRK10207 dipeptide/tripeptide 98.8 2.5E-06 5.4E-11 83.3 22.6 73 6-78 113-190 (489)
170 PF05977 MFS_3: Transmembrane 98.7 1.5E-06 3.2E-11 85.2 20.2 137 219-355 52-193 (524)
171 PRK09952 shikimate transporter 98.7 3.9E-06 8.3E-11 81.0 21.6 133 223-356 75-223 (438)
172 PRK11010 ampG muropeptide tran 98.7 3.6E-06 7.8E-11 82.4 21.3 129 227-356 60-198 (491)
173 PRK12382 putative transporter; 98.7 3.2E-06 6.9E-11 80.2 19.9 111 220-330 59-177 (392)
174 COG2223 NarK Nitrate/nitrite t 98.7 1.7E-06 3.7E-11 80.0 16.7 136 215-352 52-193 (417)
175 PRK08633 2-acyl-glycerophospho 98.6 2.3E-06 5E-11 92.4 20.6 108 220-327 55-165 (1146)
176 COG0738 FucP Fucose permease [ 98.6 3E-05 6.5E-10 71.6 24.1 121 220-343 280-400 (422)
177 TIGR01301 GPH_sucrose GPH fami 98.6 5.3E-06 1.2E-10 80.1 20.1 140 217-356 44-222 (477)
178 PRK10133 L-fucose transporter; 98.6 1E-05 2.2E-10 78.1 22.2 149 165-324 25-176 (438)
179 PRK06814 acylglycerophosphoeth 98.6 4.5E-06 9.8E-11 90.2 21.4 136 220-356 60-198 (1140)
180 COG2211 MelB Na+/melibiose sym 98.6 1.6E-05 3.4E-10 75.7 20.8 112 215-326 275-395 (467)
181 PTZ00207 hypothetical protein; 98.5 1.3E-05 2.8E-10 79.2 20.8 119 228-349 77-202 (591)
182 PF06609 TRI12: Fungal trichot 98.5 5.6E-06 1.2E-10 81.5 17.3 134 219-354 85-221 (599)
183 TIGR00883 2A0106 metabolite-pr 98.5 2.3E-06 5.1E-11 80.5 14.3 100 225-324 48-155 (394)
184 TIGR00806 rfc RFC reduced fola 98.5 7.7E-06 1.7E-10 77.8 16.3 79 7-86 124-207 (511)
185 TIGR00901 2A0125 AmpG-related 98.5 1.2E-05 2.6E-10 75.2 17.5 128 229-356 38-182 (356)
186 PRK09528 lacY galactoside perm 98.5 9.6E-06 2.1E-10 77.7 17.1 137 218-355 52-194 (420)
187 PRK15011 sugar efflux transpor 98.4 4.9E-05 1.1E-09 72.2 21.1 132 225-357 65-199 (393)
188 KOG0254 Predicted transporter 98.4 4.9E-06 1.1E-10 82.0 14.7 138 217-356 94-233 (513)
189 TIGR00806 rfc RFC reduced fola 98.4 5.3E-05 1.2E-09 72.2 19.7 103 222-325 72-174 (511)
190 PRK09848 glucuronide transport 98.4 0.00022 4.7E-09 69.0 24.8 104 223-326 275-387 (448)
191 KOG1330 Sugar transporter/spin 98.4 3.1E-07 6.8E-12 85.7 4.6 147 219-365 75-222 (493)
192 TIGR00896 CynX cyanate transpo 98.4 3E-05 6.4E-10 72.5 17.6 108 218-327 41-148 (355)
193 KOG0569 Permease of the major 98.4 1.3E-05 2.9E-10 76.9 15.2 135 222-357 70-209 (485)
194 PRK11902 ampG muropeptide tran 98.3 0.00011 2.4E-09 70.0 20.9 131 226-357 46-186 (402)
195 KOG4686 Predicted sugar transp 98.3 5E-05 1.1E-09 66.9 15.6 132 226-361 314-451 (459)
196 TIGR00882 2A0105 oligosacchari 98.2 6.8E-05 1.5E-09 71.2 17.2 136 217-355 43-186 (396)
197 KOG3764 Vesicular amine transp 98.2 1E-05 2.2E-10 74.3 10.8 135 220-358 114-253 (464)
198 TIGR00805 oat sodium-independe 98.2 2.3E-05 5E-10 79.0 12.9 44 283-326 190-233 (633)
199 KOG2615 Permease of the major 98.1 0.00021 4.5E-09 65.6 15.6 42 284-325 371-412 (451)
200 KOG3764 Vesicular amine transp 98.1 3.5E-05 7.6E-10 70.9 10.5 73 9-81 170-246 (464)
201 KOG2816 Predicted transporter 98.0 7.5E-05 1.6E-09 71.9 12.7 138 221-361 71-208 (463)
202 TIGR00792 gph sugar (Glycoside 98.0 0.00027 5.8E-09 67.9 16.3 138 219-356 42-198 (437)
203 TIGR02718 sider_RhtX_FptX side 98.0 0.00085 1.8E-08 63.6 19.3 134 222-355 48-187 (390)
204 PF03209 PUCC: PUCC protein; 98.0 0.0061 1.3E-07 56.9 23.9 66 6-71 97-166 (403)
205 TIGR00902 2A0127 phenyl propri 98.0 0.0011 2.3E-08 62.7 19.6 119 220-340 47-167 (382)
206 PF06813 Nodulin-like: Nodulin 98.0 0.00043 9.3E-09 61.0 15.4 107 218-326 43-156 (250)
207 COG3104 PTR2 Dipeptide/tripept 98.0 0.00021 4.4E-09 68.0 14.1 124 227-352 76-206 (498)
208 PF00083 Sugar_tr: Sugar (and 98.0 1.8E-07 4E-12 90.4 -6.8 104 218-321 52-158 (451)
209 PRK11128 putative 3-phenylprop 97.9 0.0012 2.6E-08 62.3 18.7 134 219-355 46-181 (382)
210 KOG2563 Permease of the major 97.9 0.00028 6.1E-09 66.2 13.0 192 155-361 258-459 (480)
211 PRK15462 dipeptide/tripeptide 97.9 0.025 5.5E-07 55.2 27.1 67 9-75 113-182 (493)
212 COG0738 FucP Fucose permease [ 97.9 0.0023 5E-08 59.4 18.4 148 168-326 15-165 (422)
213 TIGR00788 fbt folate/biopterin 97.8 0.002 4.3E-08 62.8 19.1 132 222-356 71-212 (468)
214 KOG2532 Permease of the major 97.8 0.0003 6.6E-09 68.0 12.7 130 222-351 83-215 (466)
215 KOG3098 Uncharacterized conser 97.8 0.0049 1.1E-07 59.0 19.9 105 217-322 284-409 (461)
216 PF03092 BT1: BT1 family; Int 97.8 0.0036 7.8E-08 60.3 19.4 66 18-83 109-177 (433)
217 TIGR00889 2A0110 nucleoside tr 97.6 0.0046 1E-07 59.3 17.6 39 218-256 44-83 (418)
218 KOG2504 Monocarboxylate transp 97.5 0.0014 3E-08 64.2 12.0 129 223-353 92-222 (509)
219 TIGR00880 2_A_01_02 Multidrug 97.5 0.0002 4.4E-09 56.4 5.2 71 14-84 70-141 (141)
220 PRK09669 putative symporter Ya 97.5 0.003 6.5E-08 61.0 14.2 107 220-326 53-171 (444)
221 PF11700 ATG22: Vacuole efflux 97.4 0.012 2.6E-07 57.3 18.1 139 219-357 77-252 (477)
222 PRK10429 melibiose:sodium symp 97.4 0.0081 1.8E-07 58.6 16.8 102 221-322 51-164 (473)
223 KOG0252 Inorganic phosphate tr 97.4 0.0019 4.1E-08 60.9 11.4 94 216-309 88-188 (538)
224 PF01770 Folate_carrier: Reduc 97.4 0.049 1.1E-06 51.5 20.4 73 14-86 112-186 (412)
225 PF03137 OATP: Organic Anion T 97.4 4.4E-05 9.5E-10 75.2 0.1 47 6-52 149-198 (539)
226 PF13347 MFS_2: MFS/sugar tran 97.4 0.0015 3.2E-08 62.9 10.6 128 227-354 52-200 (428)
227 KOG0253 Synaptic vesicle trans 97.4 0.02 4.4E-07 52.8 16.9 134 220-356 121-254 (528)
228 KOG2533 Permease of the major 97.3 0.0027 5.7E-08 61.8 11.8 139 219-357 88-232 (495)
229 PRK11462 putative transporter; 97.3 0.025 5.5E-07 54.9 18.0 104 223-326 56-171 (460)
230 KOG3762 Predicted transporter 97.2 0.009 2E-07 57.5 14.0 127 219-345 413-540 (618)
231 KOG2816 Predicted transporter 97.0 0.051 1.1E-06 52.6 17.4 71 14-84 131-202 (463)
232 TIGR00926 2A1704 Peptide:H+ sy 96.9 0.039 8.5E-07 55.8 16.2 100 228-327 39-150 (654)
233 KOG3626 Organic anion transpor 96.9 0.017 3.7E-07 58.1 13.2 79 6-84 245-345 (735)
234 PF01306 LacY_symp: LacY proto 96.6 0.11 2.4E-06 49.3 15.6 128 222-355 53-191 (412)
235 TIGR00769 AAA ADP/ATP carrier 96.5 0.82 1.8E-05 44.4 21.0 41 285-325 149-189 (472)
236 PF03092 BT1: BT1 family; Int 96.5 0.041 8.9E-07 53.0 12.1 128 230-358 42-181 (433)
237 COG2211 MelB Na+/melibiose sym 96.4 0.12 2.6E-06 49.8 14.6 102 227-328 63-176 (467)
238 KOG2563 Permease of the major 96.3 0.13 2.9E-06 48.7 13.8 110 217-326 84-201 (480)
239 PF05631 DUF791: Protein of un 96.2 0.99 2.1E-05 41.8 20.7 132 225-358 82-222 (354)
240 KOG3810 Micronutrient transpor 96.2 0.18 3.9E-06 46.2 13.5 73 14-86 113-187 (433)
241 PF03825 Nuc_H_symport: Nucleo 96.2 0.96 2.1E-05 43.1 19.4 42 220-261 45-87 (400)
242 KOG2325 Predicted transporter/ 95.6 0.35 7.7E-06 46.7 13.9 134 219-355 78-232 (488)
243 PF05978 UNC-93: Ion channel r 95.5 1.1 2.3E-05 36.6 15.1 102 220-322 45-146 (156)
244 PRK09848 glucuronide transport 95.5 1.1 2.3E-05 43.4 17.0 28 219-246 51-82 (448)
245 PF03209 PUCC: PUCC protein; 95.3 0.69 1.5E-05 43.5 14.1 47 284-330 108-154 (403)
246 COG0477 ProP Permeases of the 94.9 0.55 1.2E-05 41.4 12.4 106 220-325 47-156 (338)
247 TIGR01272 gluP glucose/galacto 94.8 0.38 8.2E-06 44.1 11.2 43 283-325 28-70 (310)
248 PF02487 CLN3: CLN3 protein; 93.9 5.9 0.00013 37.6 17.9 40 283-322 353-392 (402)
249 KOG2325 Predicted transporter/ 93.4 1 2.2E-05 43.7 11.0 46 285-330 408-453 (488)
250 PF12832 MFS_1_like: MFS_1 lik 90.8 2.7 5.9E-05 29.6 8.2 32 219-250 42-73 (77)
251 PF07672 MFS_Mycoplasma: Mycop 90.6 11 0.00024 33.3 13.3 53 26-79 1-59 (267)
252 COG3104 PTR2 Dipeptide/tripept 90.5 18 0.00039 35.2 17.3 67 14-80 136-204 (498)
253 TIGR00939 2a57 Equilibrative N 89.8 20 0.00043 34.6 21.1 38 283-320 390-427 (437)
254 PF01770 Folate_carrier: Reduc 89.0 22 0.00047 34.0 17.1 98 228-326 57-154 (412)
255 PF03219 TLC: TLC ATP/ADP tran 88.6 26 0.00056 34.4 20.0 42 285-326 164-205 (491)
256 COG2807 CynX Cyanate permease 86.5 28 0.00061 32.6 16.0 125 223-349 58-183 (395)
257 PF01733 Nucleoside_tran: Nucl 85.2 0.33 7.2E-06 44.4 0.7 80 5-89 4-91 (309)
258 PF00854 PTR2: POT family; In 84.4 17 0.00038 34.0 12.0 66 284-349 52-120 (372)
259 PF06813 Nodulin-like: Nodulin 83.9 2.6 5.6E-05 37.3 5.6 62 19-81 120-181 (250)
260 COG2270 Permeases of the major 80.5 29 0.00063 33.1 11.3 102 219-320 65-170 (438)
261 PF00854 PTR2: POT family; In 77.4 1.8 3.9E-05 40.7 2.6 65 14-78 52-119 (372)
262 PF05978 UNC-93: Ion channel r 75.1 2.8 6E-05 34.2 2.7 49 6-54 97-148 (156)
263 KOG3098 Uncharacterized conser 74.3 51 0.0011 32.0 11.5 103 215-318 53-155 (461)
264 PF13000 Acatn: Acetyl-coenzym 72.4 50 0.0011 32.4 10.7 141 228-369 56-238 (544)
265 PF06779 DUF1228: Protein of u 71.7 35 0.00075 24.6 7.5 44 219-262 34-77 (85)
266 COG0477 ProP Permeases of the 68.6 13 0.00028 32.4 6.0 64 9-72 105-175 (338)
267 KOG0637 Sucrose transporter an 68.2 11 0.00023 36.4 5.2 39 279-317 156-195 (498)
268 PF12854 PPR_1: PPR repeat 56.9 9.1 0.0002 22.0 1.8 17 88-104 17-33 (34)
269 PF11947 DUF3464: Protein of u 53.7 1.1E+02 0.0024 24.8 7.9 80 234-313 56-142 (153)
270 TIGR00769 AAA ADP/ATP carrier 53.1 2.3E+02 0.005 27.7 26.0 38 17-54 151-188 (472)
271 PRK10697 DNA-binding transcrip 51.7 14 0.0003 28.4 2.5 31 75-105 57-87 (118)
272 PF06963 FPN1: Ferroportin1 (F 51.0 2.4E+02 0.0052 27.3 22.3 100 219-318 300-409 (432)
273 TIGR02978 phageshock_pspC phag 47.2 28 0.0006 26.9 3.5 43 46-88 17-65 (121)
274 PF04281 Tom22: Mitochondrial 46.0 40 0.00086 26.7 4.3 22 290-311 60-81 (137)
275 TIGR00926 2A1704 Peptide:H+ sy 45.2 65 0.0014 33.0 6.8 70 9-78 98-178 (654)
276 PF03219 TLC: TLC ATP/ADP tran 42.6 3.4E+02 0.0075 26.7 24.6 40 17-56 166-205 (491)
277 PF11151 DUF2929: Protein of u 42.3 98 0.0021 20.3 5.6 43 43-85 14-56 (57)
278 TIGR00986 3a0801s05tom22 mitoc 41.8 35 0.00075 27.1 3.3 22 290-311 58-79 (145)
279 PF01535 PPR: PPR repeat; Int 41.6 25 0.00054 18.8 2.0 19 88-106 10-28 (31)
280 PRK03612 spermidine synthase; 41.3 3.7E+02 0.008 26.7 19.3 24 301-324 145-168 (521)
281 KOG3762 Predicted transporter 40.8 44 0.00096 33.1 4.5 62 16-77 480-542 (618)
282 PF04024 PspC: PspC domain; I 39.6 19 0.00042 24.0 1.4 30 56-85 27-60 (61)
283 PF02487 CLN3: CLN3 protein; 39.2 3.5E+02 0.0076 25.8 16.9 121 225-352 72-195 (402)
284 TIGR00756 PPR pentatricopeptid 38.9 43 0.00093 18.2 2.8 19 88-106 10-28 (35)
285 PF13041 PPR_2: PPR repeat fam 38.4 37 0.00081 21.0 2.7 21 87-107 12-32 (50)
286 PF13428 TPR_14: Tetratricopep 35.4 63 0.0014 19.4 3.3 21 87-107 10-30 (44)
287 COG4708 Predicted membrane pro 34.3 58 0.0013 25.9 3.5 28 216-243 138-165 (169)
288 PRK10263 DNA translocase FtsK; 33.7 7.3E+02 0.016 27.9 15.3 22 220-241 60-81 (1355)
289 PF06963 FPN1: Ferroportin1 (F 31.9 4.8E+02 0.01 25.2 21.9 52 296-347 144-195 (432)
290 PF13812 PPR_3: Pentatricopept 31.7 64 0.0014 17.6 2.7 19 89-107 12-30 (34)
291 COG5336 Uncharacterized protei 29.5 1.4E+02 0.003 22.6 4.5 21 230-250 60-81 (116)
292 COG5336 Uncharacterized protei 29.4 2.3E+02 0.005 21.4 5.7 52 296-347 37-90 (116)
293 PF07721 TPR_4: Tetratricopept 28.1 44 0.00096 17.6 1.4 14 89-102 12-25 (26)
294 KOG3574 Acetyl-CoA transporter 25.6 6.1E+02 0.013 24.4 14.2 28 231-258 82-115 (510)
295 KOG1278 Endosomal membrane pro 24.9 1.2E+02 0.0026 30.1 4.5 56 22-77 354-414 (628)
296 PF06796 NapE: Periplasmic nit 22.7 2.3E+02 0.0051 18.6 4.2 18 176-193 33-50 (56)
297 KOG4332 Predicted sugar transp 22.0 6.1E+02 0.013 23.1 8.7 17 230-246 90-106 (454)
298 KOG1479 Nucleoside transporter 21.8 7.1E+02 0.015 23.8 11.1 26 284-309 362-387 (406)
299 KOG1237 H+/oligopeptide sympor 21.3 8.5E+02 0.018 24.5 13.6 28 225-252 86-114 (571)
300 TIGR02973 nitrate_rd_NapE peri 21.1 2.1E+02 0.0046 17.5 4.4 18 176-193 20-37 (42)
301 TIGR03032 conserved hypothetic 21.0 32 0.0007 31.4 0.0 10 79-88 202-211 (335)
302 TIGR02972 TMAO_torE trimethyla 20.3 2.4E+02 0.0052 17.8 4.2 18 176-193 25-42 (47)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.8e-50 Score=355.50 Aligned_cols=341 Identities=36% Similarity=0.567 Sum_probs=279.6
Q ss_pred eeeccCcchhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCChh
Q 017592 7 FWERRCGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPR 86 (369)
Q Consensus 7 ~~G~g~~~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP~ 86 (369)
.+|+|+.|+..++..|+.|..+|+..+... .+|.+|.+..+.+++..++..|||+..+...+|..+...+.+|+|||||
T Consensus 177 ~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 177 GFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred hccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 458888899999999999999999888777 9999999999999999999999999999999999999999999999999
Q ss_pred hHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhh
Q 017592 87 YLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLAR 166 (369)
Q Consensus 87 ~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 166 (369)
|++.||+.+||.+.++|+++.|+.+.|..++..+...+++++..+ .++. +.+..+........++.++.||
T Consensus 256 f~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~------~~~~---~~~a~ke~rg~~~nLlsp~lrk 326 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESD------LDDS---KSSAAKEVRGGTTNLLSPKLRK 326 (528)
T ss_pred hhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhc------hhhh---hhccccccccchHhhcChHHHH
Confidence 999999999999999999999999999877654332222221110 0100 0011111223577889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC------Cccc----CCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 167 TTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSP------LMFS----HHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~------~~~~----~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
+++++|.+|++|.++|||..+++..+.+.+..|.-. +.+- ...+.. -|.+.++..+.+++|.+++++++
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~-dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAK-DYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchh-HHHHHHHHHHhhCCchhHHHHHH
Confidence 999999999999999999998888776554433322 2111 112222 37889999999999999999999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMV 316 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~ 316 (369)
||+|||+.+..++++++++.+++....+......+++.+.+++.+++...|+|++|+|||.+|++|.|.|..++|+++++
T Consensus 406 erlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~ 485 (528)
T KOG0253|consen 406 ERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIF 485 (528)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhh
Confidence 99999999999999999998887765555555677888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCC
Q 017592 317 CPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQEL 360 (369)
Q Consensus 317 ~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l 360 (369)
+|+++ +....+.+.+..+|+.+++++++.+.++|-|||||++
T Consensus 486 ~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 486 SPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99998 3454556678999999999999999999999999986
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-39 Score=304.98 Aligned_cols=323 Identities=19% Similarity=0.275 Sum_probs=233.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH--HHhccCCCchhhHhhhhHHHHHHHHHHhhc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA--WIIMPRLDWRWLLGLSSIPSFILLAFLGFQ 81 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~--~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 81 (369)
+.|+.++ ....-|+.|.+|++.||...++.+.+..+|.+++..++ ..+.+...|++.+.+..+|+++.++..+++
T Consensus 125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~ 204 (485)
T KOG0569|consen 125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFL 204 (485)
T ss_pred HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 4566665 34556999999999999999999999999999986654 334566789999999999999999999999
Q ss_pred cCChhhHhh-cCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhh
Q 017592 82 PESPRYLCL-KGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLF 160 (369)
Q Consensus 82 pESP~~l~~-~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (369)
|||||||.. |||.+||+|+++++++..+.+ ++.. ++ .+..+. ++.++ ++..++.+++
T Consensus 205 PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~---~~~e--------~~------~~e~~~--~~~~~---~~~~sl~~~~ 262 (485)
T KOG0569|consen 205 PESPKYLLIKKGDEEEARKALKFYRGKEDVE---AEIE--------EM------LREIEE--EELEK---KKQISLRQLL 262 (485)
T ss_pred CCCcchHHHHcCCHHHHHHHHHHHhCCCcch---hHHH--------HH------HHHHHH--hcccc---ccCCcHHHHh
Confidence 999999987 899999999999997643211 1110 00 000000 00000 0113567777
Q ss_pred cc-hhhhHHHHHHHH-HH-----HHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHH
Q 017592 161 SS-KLARTTILLWLL-LF-----GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAA 233 (369)
Q Consensus 161 ~~-~~~~~~~~~~~~-~~-----~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~ 233 (369)
++ ..|+...+...+ .+ .+.+.+|++.++...-. +.......+...+...++..+++.
T Consensus 263 ~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~----------------~~~~a~~an~~~g~v~~~~t~~~~ 326 (485)
T KOG0569|consen 263 KNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF----------------TPEEAQYANLGIGIVNLLSTLVSP 326 (485)
T ss_pred cCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC----------------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 445544333322 22 46677888887765211 111223445666778889999999
Q ss_pred HHHhhhchhHHHHHHHHHHHHHHHHHhh----c-cc-hhHHHHH---HH-HHHHHHhhhhHHHHHhhcccccccchhhhH
Q 017592 234 ILVDTAGRKLSITIMFTLSCLFLLPLVT----Y-QS-NILTTGL---LF-GARMCVMGAFTVSLIYAAEIYPTSVRSTGA 303 (369)
Q Consensus 234 ~l~dr~GRR~~~~~~~~~~~~~~~~~~~----~-~~-~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~ 303 (369)
+++||.|||++++.+..++.++.+.+.. . .. .+..+.+ .+ ....+..|..+++|.+.+|+||++.|++++
T Consensus 327 ~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~ 406 (485)
T KOG0569|consen 327 FLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQ 406 (485)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHH
Confidence 9999999999999887776655444321 1 11 2222221 11 112234566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCcccccC
Q 017592 304 GAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTS 368 (369)
Q Consensus 304 g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~~ 368 (369)
+++..++|+.+++..+.++++.+..+. ..+++|.+.+++..+..++.+||||||+.+|+.++.+
T Consensus 407 s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 407 SVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 999999999999999999999888776 5788899999998999999999999999999988754
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=6.2e-38 Score=313.24 Aligned_cols=349 Identities=25% Similarity=0.399 Sum_probs=239.8
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-------------CCchhhHhhhhHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-------------LDWRWLLGLSSIP 70 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-------------~~WR~~~~~~~ip 70 (369)
+.|+|.+ ++..+|++|++|++.||...+.++.++.+|.++++.+++.+.+. .+||++++++++|
T Consensus 264 l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp 343 (742)
T TIGR01299 264 LSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFP 343 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHH
Confidence 3455543 67778999999999999999999999999999988776655432 4699999999999
Q ss_pred HHHHHHHHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCC--CCccccccccCCCCCCCCCcccccccccCCC-----
Q 017592 71 SFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKL--PNGKLVARRSTLPTGERAPPELVHLLSSNGG----- 143 (369)
Q Consensus 71 ~~i~~~~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 143 (369)
.++.++.++++|||||||..|||.+||.++++++++.|++.. |...+..+ +.+..... .+..+..+....
T Consensus 344 ~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~ 420 (742)
T TIGR01299 344 CVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVN-HIKTIHQE--DELIEIESDTGTWYQRC 420 (742)
T ss_pred HHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHH-HHHHhhhh--hhhhcccccccchhhcc
Confidence 999888888999999999999999999999999988775421 11111000 00000000 000000000000
Q ss_pred -CCc-cCCCchhhHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-------------------------
Q 017592 144 -NKT-TEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLD------------------------- 196 (369)
Q Consensus 144 -~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~------------------------- 196 (369)
... ......+..+..+|+++++++++++++.|++..+.||++.+|.|.+....
T Consensus 421 ~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (742)
T TIGR01299 421 FVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFT 500 (742)
T ss_pred hhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccc
Confidence 000 00011123567789999999999999999999999999999999763210
Q ss_pred -------------------------------cccCCCCcccC-----------------------------------C--
Q 017592 197 -------------------------------TRCRSPLMFSH-----------------------------------H-- 208 (369)
Q Consensus 197 -------------------------------~~~~~~~~~~~-----------------------------------~-- 208 (369)
..|+-+..+.. .
T Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (742)
T TIGR01299 501 LENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNK 580 (742)
T ss_pred hhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccC
Confidence 00110000000 0
Q ss_pred -C-------CC---hhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 017592 209 -P-------QD---ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARM 277 (369)
Q Consensus 209 -~-------~~---~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (369)
. .+ ...+...++.+++.++|.+++++++||+|||++++.+.++++++.+.+.+..+.....++.++..+
T Consensus 581 ~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~ 660 (742)
T TIGR01299 581 EGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGG 660 (742)
T ss_pred CccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 0 00 112445667778899999999999999999999988887777766555443332222222333334
Q ss_pred HHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 278 CVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 278 ~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
+..+.++..+.+++|+||++.|++++|+++..+++|++++|++.+.+... +...++++++++.++++++.++ +|||+|
T Consensus 661 ~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~~ 738 (742)
T TIGR01299 661 LSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCcc
Confidence 44556778999999999999999999999999999999999998876654 3445677777777776666655 489999
Q ss_pred CCC
Q 017592 358 QEL 360 (369)
Q Consensus 358 ~~l 360 (369)
+.|
T Consensus 739 ~~l 741 (742)
T TIGR01299 739 QVL 741 (742)
T ss_pred ccc
Confidence 876
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.4e-36 Score=297.09 Aligned_cols=326 Identities=21% Similarity=0.246 Sum_probs=211.7
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc-----------------------cCCCch
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-----------------------PRLDWR 61 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~-----------------------~~~~WR 61 (369)
.|+|.+ +...+|++|++|++.||+..++.+.++.+|.+++..++..+. ..++||
T Consensus 125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 355554 667789999999999999999999999999988876654431 125899
Q ss_pred hhHhhhhHHHHHHHHHHhhccCChhhHhhcCChH-HHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCccccccccc
Q 017592 62 WLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTA-EAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 140 (369)
Q Consensus 62 ~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g~~~-~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (369)
+++.++++|+++.++.++++|||||||..|||.+ ++.+.++|.++.+.++ + ..+.++. ++
T Consensus 205 ~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~-~--------~~~~~~~----------~~ 265 (502)
T TIGR00887 205 ILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEA-E--------PDEVEKA----------ST 265 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccccc-C--------cccccch----------hc
Confidence 9999999999998888899999999999998874 5777777765321100 0 0000000 00
Q ss_pred CCCCCccCCCchhhHHHHhhcc----hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCCh----
Q 017592 141 NGGNKTTEGKSGLSLFLMLFSS----KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA---- 212 (369)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---- 212 (369)
+ + +.. ..++++++++ +++++++..+..++.+.+.+|++..+.|.+....+. ........
T Consensus 266 ~--~--~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~------~~~~~~~~~~~~ 332 (502)
T TIGR00887 266 A--V--EVP---KASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGY------SPPAATNNAYEE 332 (502)
T ss_pred c--c--cch---hhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcC------CCCccchhHHHH
Confidence 0 0 000 1135555542 233444445566777778889887777765432110 00000000
Q ss_pred ---hhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--cc-chhHHHHHH-HHHHHHHhhhhHH
Q 017592 213 ---NLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQ-SNILTTGLL-FGARMCVMGAFTV 285 (369)
Q Consensus 213 ---~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~-~~~~~~~~~~~~~ 285 (369)
.......+..++.+++.+++++++||+|||++++.+..+.+++...+.. .. +......+. ....++..+..++
T Consensus 333 ~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (502)
T TIGR00887 333 LYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNAT 412 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCch
Confidence 0011233445567788899999999999999987766555444333222 11 111111111 1111223344567
Q ss_pred HHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc----------hhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 286 SLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC----------HQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 286 ~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.|.+.+|+||++.|+++.|+++.+++++++++|++.+++.+.. +...++++++++++++.+.. +++|||
T Consensus 413 ~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt 491 (502)
T TIGR00887 413 TFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPET 491 (502)
T ss_pred hhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccC
Confidence 8999999999999999999999999999999999998877632 22346777877777765554 566999
Q ss_pred CCCCCCCcccc
Q 017592 356 KGQELSDTVDF 366 (369)
Q Consensus 356 kg~~l~e~~~~ 366 (369)
||+++||+-+|
T Consensus 492 ~~~~leei~~~ 502 (502)
T TIGR00887 492 KGKSLEELSGE 502 (502)
T ss_pred CCCCHHhhhCC
Confidence 99999987543
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.7e-32 Score=268.77 Aligned_cols=311 Identities=32% Similarity=0.552 Sum_probs=224.8
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|++.+ +...+++.|+.|+++|++..++.+.++.+|.+++..+++.+ .+||..+.+.++|.++..+..+++||
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI---PDWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3455554 56667899999999999999999999999999988887665 34999999999999888777789999
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc-
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS- 162 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 162 (369)
||||+..++|.+||++.+++..+.|+.+.+.+... .+.. ++. . ++++ ...+.+++++
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~------~~~~----------~~~-~--~~~~---~~~~~~l~~~~ 323 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLS------LSLE----------KDL-S--SSKK---QYSFLDLFRTP 323 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHh------hhhh----------hhh-h--hccC---CCcHHHHhCCh
Confidence 99999999999999999999988776432211000 0000 000 0 0000 1135566654
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+.++.++..++.|+.+.+.||++..+.+.+. .+.+...++.++..+++.++.++++||+|||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr 385 (505)
T TIGR00898 324 NLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG------------------GNIYLDLFISGLVELPAKLITLLLIDRLGRR 385 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccC------------------CChHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 4555566666778888888888766554321 1234566677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccch--hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSN--ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.+..+.+++++..+.+....+. .....+.++..++..+.++..+.+.+|+||+++|+++.|+++.+++++++++|++
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i 465 (505)
T TIGR00898 386 YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFL 465 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHH
Confidence 99988777666555444432222 2223333344444555667889999999999999999999999999999999988
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCc
Q 017592 321 AVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDT 363 (369)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~ 363 (369)
.. + ...+...++++++++.+++++..++ +|||++++++|+
T Consensus 466 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~~~l~~t 505 (505)
T TIGR00898 466 VY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPETKGVPLPET 505 (505)
T ss_pred HH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCCCCCCCCCC
Confidence 87 3 3334456777788777776666554 589999999885
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=7.9e-39 Score=309.06 Aligned_cols=323 Identities=29% Similarity=0.427 Sum_probs=216.0
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCchhhHhhhhHHHHHHHHHHhh
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP---RLDWRWLLGLSSIPSFILLAFLGF 80 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~---~~~WR~~~~~~~ip~~i~~~~~~~ 80 (369)
+.|+|.| ++..+|+.|++|+++||+..++.+.++.+|.+++..+.+.... .++||+.+.++++|.++.++.+.+
T Consensus 111 ~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~ 190 (451)
T PF00083_consen 111 LIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFF 190 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455554 6777899999999999999999999999999998777665433 246999999999999988888899
Q ss_pred ccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhh
Q 017592 81 QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLF 160 (369)
Q Consensus 81 lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (369)
+|||||||.+|||.|||+++++|+++.+..+ .|.+++.+ +. + +.++++ ..+.+++
T Consensus 191 ~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~-----------~~~~~~~~--~~----~-----~~~~~~---~~~~~l~ 245 (451)
T PF00083_consen 191 LPESPRWLLSKGRDEEAEKVLRKLRGKEIED-----------EEIEEIKA--EK----K-----ESQESK---ASWRDLF 245 (451)
T ss_pred cccccceeccccccccccccccccccccccc-----------cccccccc--cc----c-----cccccc---eeeeecc
Confidence 9999999999999999999999965432111 01111100 00 0 000000 2355566
Q ss_pred cc-hhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh
Q 017592 161 SS-KLARTTILLWLLLFGNSF-AYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT 238 (369)
Q Consensus 161 ~~-~~~~~~~~~~~~~~~~~~-~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr 238 (369)
++ ++++++++...+.+.... .++....+.+.+.... ..+ .+ +...++.++..+++.+++.+++||
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~-----------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENA-----------GIS-NS-FLATLILGLVNFLGTLLAIFLIDR 312 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc-----------ccc-cc-cccccccccccccccccccccccc
Confidence 54 345555554444433322 2223333333333111 111 11 233455566777888888899999
Q ss_pred hchhHHHHHHHHHHHHHHHHHh---h--ccc----hhHHHHHHHHHH-HHHhhhhHHHHHhhcccccccchhhhHHHHHH
Q 017592 239 AGRKLSITIMFTLSCLFLLPLV---T--YQS----NILTTGLLFGAR-MCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 308 (369)
Q Consensus 239 ~GRR~~~~~~~~~~~~~~~~~~---~--~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~ 308 (369)
+|||++++.+..+++++.+.+. . ... ......+..... .+..+..+..|.+.+|+|||++|+++.|+++.
T Consensus 313 ~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~ 392 (451)
T PF00083_consen 313 FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYA 392 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccc
Confidence 9999998877665554443332 1 111 111111111111 12234456788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCccccc
Q 017592 309 MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFT 367 (369)
Q Consensus 309 ~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~ 367 (369)
++++++++.|++.+.+.+..+....+.+++.+++++.++.++++||||||++||+.++.
T Consensus 393 ~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 393 VGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred cccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 99999999999888776655434567788888888888888889999999999987763
No 7
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=269.89 Aligned_cols=322 Identities=25% Similarity=0.313 Sum_probs=217.4
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhhHhhhhHHHHHHHHHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-~~WR~~~~~~~ip~~i~~~~~~~lp 82 (369)
+.|+|.| .++..|++|++|++.||.+.+..+..+.+|.+++..+.+..... ++||+++.++.+|+++..+..+++|
T Consensus 151 l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 151 LTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred HhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456654 56678999999999999999999999999999986666554322 5899999999999999988888999
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
||||||.++||.+||+++++++++.+..+ ...+....+ .+........ ..+ ..+.+++++
T Consensus 231 esp~~L~~~g~~~~a~~~l~~l~g~~~~~-~~~~~~~~~-------------~~~~~~~~~~---~~~---~~~~~l~~~ 290 (513)
T KOG0254|consen 231 ESPRWLIEKGRLEEAKRSLKRLRGLSPED-VEVELELLK-------------IKLLVEAEVA---EGK---ASWGELFSP 290 (513)
T ss_pred CChHHHHHcCChHHHHHHHHHHhCCCCcc-hHHHHHHHH-------------HHHHHhhhcc---ccc---ccHHHhcCc
Confidence 99999999999999999999997643111 111110000 0000000000 000 124556665
Q ss_pred hhhhHHHHHHHHH-H-----HHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 163 KLARTTILLWLLL-F-----GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 163 ~~~~~~~~~~~~~-~-----~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
+.+|+..+...+. + .+.+.||...++...- ..+ +.....++.++..+++.+++.+++
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g----------------~~~-~~~~~~~~~~~v~~~~t~~~~~lv 353 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG----------------LKS-DTFLASIILGVVNFLGTLVATYLV 353 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC----------------CCC-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665444332 2 2445566665543311 111 114556777888889999999999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHhh----c-c----c---hhHHHHHH-HHHHHHHhhhhHHHHHhhcccccccchhhhH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLVT----Y-Q----S---NILTTGLL-FGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 303 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~~----~-~----~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~ 303 (369)
||+|||++++.+.....+..+.+.. . . . .+...... .....+..+..+++|.+.+|+||.++|+++.
T Consensus 354 d~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~ 433 (513)
T KOG0254|consen 354 DRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGA 433 (513)
T ss_pred HHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhH
Confidence 9999999999876655544443321 1 1 0 11111111 1122234455678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH-HHHhccCcCCCCCCCCccc
Q 017592 304 GAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSIL-SVMLIPFETKGQELSDTVD 365 (369)
Q Consensus 304 g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~~~~pETkg~~l~e~~~ 365 (369)
+++..++|+.+++....++.+....+....+.+|+..+.+..+ .++++.|||||+++||+.+
T Consensus 434 s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 434 SLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 9999999999888877777665543323456667766666666 6788889999999998765
No 8
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=9.4e-30 Score=250.20 Aligned_cols=320 Identities=30% Similarity=0.409 Sum_probs=232.3
Q ss_pred eccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCCh
Q 017592 9 ERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESP 85 (369)
Q Consensus 9 G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP 85 (369)
|++++ .+..++++|+.++|+|+.+.++...++..|.+..+..+++. .+||+.+++..+|.++.++.++..||||
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~---~~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYIT---RDWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 55554 45566889999999999999997778888888777777775 4999999999999998888777777999
Q ss_pred hhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch-h
Q 017592 86 RYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK-L 164 (369)
Q Consensus 86 ~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 164 (369)
||+..|||.+||.+.++++.+.|+.+........... . ..+. +....+ +...+.++++.+ .
T Consensus 259 rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~----~---------~~~~--~~~~~~---~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 259 RWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLEL----L---------LRPL--KLLFTE---PKISFLDLFRTPRL 320 (521)
T ss_pred HHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHH----H---------hhHh--hhhccC---CCCchhhhhcCHHH
Confidence 9999999999999999999988744322211110000 0 0000 000000 112356666644 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 244 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~ 244 (369)
+++++.+++.|+.....||++......+. .+.+.+..+.+....++....+...|++|||..
T Consensus 321 ~~~~~~~~~~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~ 382 (521)
T KOG0255|consen 321 RYRTLYLLFIWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPP 382 (521)
T ss_pred HHHHHHHHHHHHHHhHHHHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHH
Confidence 78888888999988999999876554332 244666677777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-c-ch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 245 ITIMFTLSCLFLLPLVTY-Q-SN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
...+..++.+.++..... . .. ++..++..+..++...++...+.+.+|++||.+|+++.+.++.+++++++++|++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 383 LFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998877766655554432 1 12 23445555555666666777899999999999999999999999999999999886
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCcccccC
Q 017592 322 VALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTS 368 (369)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~~ 368 (369)
..... ......+.+++....+.+.+..+++|||+++.++|+++|.+
T Consensus 463 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 463 LLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 53333 33333444467666666666667779999999999988765
No 9
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.3e-30 Score=237.76 Aligned_cols=331 Identities=21% Similarity=0.235 Sum_probs=225.9
Q ss_pred cceeeeccCc-chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc-------cC--------CCchhhHhhh
Q 017592 4 GWAFWERRCG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-------PR--------LDWRWLLGLS 67 (369)
Q Consensus 4 ~~~~~G~g~~-~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~-------~~--------~~WR~~~~~~ 67 (369)
.|+-.|+||. |...+-.+|.+.+++||...+....+...|.+.++.++..+. +. .-||+.+.++
T Consensus 152 ~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg 231 (538)
T KOG0252|consen 152 FLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLG 231 (538)
T ss_pred HHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHH
Confidence 3566789997 555556789999999999998888888888887766655431 11 2499999999
Q ss_pred hHHHHHHHHHHhhccCChhhHhhc-CChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCc
Q 017592 68 SIPSFILLAFLGFQPESPRYLCLK-GRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKT 146 (369)
Q Consensus 68 ~ip~~i~~~~~~~lpESP~~l~~~-g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (369)
++|+++.++.|+.||||+||-... ++.++|. +.+ .++.+. +++..+++ + ....
T Consensus 232 ~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~----~k~~~~---------~~~~~~~~-------~--~~~~- 285 (538)
T KOG0252|consen 232 AVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDM----KKVLSV---------DIEAESTA-------E--SDVP- 285 (538)
T ss_pred HHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcc----cccccc---------ccchhhcc-------c--cCCC-
Confidence 999999999999999999998433 3334443 111 111110 00000000 0 0000
Q ss_pred cCCCchhhHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCCh----hhHHHHHHHH
Q 017592 147 TEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA----NLYIDEFITS 222 (369)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ 222 (369)
..+...+.+..+|...+-++.+-....|+..-+.+|+.+++...+.+.-. ....+.... ....+.++..
T Consensus 286 -~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig------~~~~~~~~~~~~~vA~~~~iia~ 358 (538)
T KOG0252|consen 286 -PPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIG------VIPSANTYHELFKVAEGNLIIAV 358 (538)
T ss_pred -CcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhc------cCCCcchHHHHHHHHHHHHHHHH
Confidence 00111122333443334466666778899999999999988887654111 001111111 1123556777
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchh----HHHHHHHH-HHHHHhhhhHHHHHhhccccccc
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNI----LTTGLLFG-ARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
+..+||..++..++|++|||++.+-++++.+++.+.+....++. ...++..+ ..+...|.++...++++|.||++
T Consensus 359 ~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar 438 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR 438 (538)
T ss_pred HccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH
Confidence 88899999999999999999999999988888877766543311 11222222 22345567778899999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHh-----hchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCcccccC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVA-----NCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTS 368 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~~ 368 (369)
+|+++.|++.++|..|++++.+.+.++.+ ..+....+++++.+.+++.+..+++ ||||||++||+.+|.+
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNEEE 513 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcChhh
Confidence 99999999999999999999998888877 4555667888888888877666655 6999999999877654
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=2.5e-28 Score=237.60 Aligned_cols=320 Identities=20% Similarity=0.209 Sum_probs=197.5
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhhHhhhhHHHHHHHH
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM--------PRLDWRWLLGLSSIPSFILLA 76 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~--------~~~~WR~~~~~~~ip~~i~~~ 76 (369)
.|+|.+ +...+|++|+.|+|+||++.++.+.++.+|.+++..++..+. ..++||++|.+.+++.++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence 356554 566789999999999999999999999999998766654432 347999999999998888877
Q ss_pred HHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH
Q 017592 77 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 156 (369)
Q Consensus 77 ~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (369)
..+++||||+|+..++|.+++++.++++.+.+. .+... ++ ..+.... ++. ..
T Consensus 210 ~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~------~~~~~~~------~~~-----~~ 261 (479)
T PRK10077 210 LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL---ATQAL--------QE------IKHSLDH------GRK-----TG 261 (479)
T ss_pred HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh---HHHHH--------HH------HHHHHHH------hhh-----hh
Confidence 788899999999989998888877766532110 00000 00 0000000 000 00
Q ss_pred HHhhcchhhhHHHHHH--HHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHH
Q 017592 157 LMLFSSKLARTTILLW--LLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAI 234 (369)
Q Consensus 157 ~~l~~~~~~~~~~~~~--~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~ 234 (369)
...+. ......... ...+.+...++....+.|.+.... +.+...........++..+++.+++++
T Consensus 262 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~-----------g~~~~~~~~~~~~~~~~~~i~~~~~g~ 328 (479)
T PRK10077 262 GKLLM--FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTL-----------GASTDIALLQTIIVGVINLTFTVLAIM 328 (479)
T ss_pred hhhcc--hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHc-----------CCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 00010 001111111 111222223334444445443210 111111223444566778888999999
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHHHhh--ccc-hh-HHHHHHHHHHHHH-hhhhHHHHHhhcccccccchhhhHHHHHHH
Q 017592 235 LVDTAGRKLSITIMFTLSCLFLLPLVT--YQS-NI-LTTGLLFGARMCV-MGAFTVSLIYAAEIYPTSVRSTGAGAANAM 309 (369)
Q Consensus 235 l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~~~~-~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~ 309 (369)
++||+|||++++.+.++.++..+.+.. ..+ .. ............. ....+..+.+.+|+||++.|+++.|+.+.+
T Consensus 329 l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 408 (479)
T PRK10077 329 TVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAA 408 (479)
T ss_pred HHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHH
Confidence 999999999998877655554433321 111 11 1111111111111 112246789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH------hhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCcccccC
Q 017592 310 GRIGGMVCPLVAVALV------ANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTS 368 (369)
Q Consensus 310 ~~i~~~~~p~~~~~l~------~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~~ 368 (369)
+++++++++++++.+. +..+....+.++++.++++.++.++++||||++++||..++.+
T Consensus 409 ~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 473 (479)
T PRK10077 409 QWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWE 473 (479)
T ss_pred HHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHh
Confidence 9999999988877554 2333445677777777777777777789999999998765543
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=7.9e-27 Score=227.65 Aligned_cols=297 Identities=16% Similarity=0.131 Sum_probs=183.6
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh--------ccCCCchhhHhhhhHHHHHHHH
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII--------MPRLDWRWLLGLSSIPSFILLA 76 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~--------~~~~~WR~~~~~~~ip~~i~~~ 76 (369)
.|+|.+ +...++++|++|+|+||++.++.+.++.+|.++++.+...+ .+.+|||++|++++++.++.++
T Consensus 128 ~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~ 207 (490)
T PRK10642 128 QGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY 207 (490)
T ss_pred HHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 366554 56678999999999999999999999888888876554332 1358999999999888777777
Q ss_pred HHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH
Q 017592 77 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 156 (369)
Q Consensus 77 ~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (369)
++.++||||+|+..+++.++.. . + . ..+ +++ .++
T Consensus 208 ~~~~~~esp~~~~~~~~~~~~~----------~-~----------~--~~~--------------------~~~---~~~ 241 (490)
T PRK10642 208 LRHALEETPAFQQHVDKLEQGD----------R-E----------G--LQD--------------------GPK---VSF 241 (490)
T ss_pred HHHcCCCChhHHHHHHhhhhhc----------c-c----------c--ccc--------------------ccc---CCH
Confidence 7888999999975433221110 0 0 0 000 000 123
Q ss_pred HHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 157 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
.+++++ .++........++.....||+...+.|.+.... .+.+............++.+++.++.++++
T Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 310 (490)
T PRK10642 242 KEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN----------LHYSEDHGVLIIIAIMIGMLFVQPVMGLLS 310 (490)
T ss_pred HHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 344444444445555677888877777654211 011111112223344566778888899999
Q ss_pred hhhchhHHHHHHHHHHHHHHHH-Hh--hccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLP-LV--TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIG 313 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~ 313 (369)
||+|||+.+..+.++..+.... .. ...+........+...++.....+....+.+|+||+++|+++.|+.+++++++
T Consensus 311 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~ 390 (490)
T PRK10642 311 DRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLV 390 (490)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHH
Confidence 9999999887665432222211 11 11111111111122222222334566778889999999999999999999988
Q ss_pred HHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCC
Q 017592 314 GMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQELSD 362 (369)
Q Consensus 314 ~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e 362 (369)
+.++|++.+++.+..+ ...+.++..+..+++.+..++ .|||+++.+++
T Consensus 391 g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~~~~~~~ 439 (490)
T PRK10642 391 AGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETANRPLKG 439 (490)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hccccCCCCCC
Confidence 9999999887766433 233444444555555555444 58999887754
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=8.2e-25 Score=211.77 Aligned_cols=327 Identities=20% Similarity=0.242 Sum_probs=197.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH---HHhccCCCchhhHhhhhHHHHHHHHHHhh
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA---WIIMPRLDWRWLLGLSSIPSFILLAFLGF 80 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~---~~~~~~~~WR~~~~~~~ip~~i~~~~~~~ 80 (369)
+.|+|.+ +...+++.|+.|+++||++.++.+.++.+|.+++..+. .......+||++|.+.+++.++.++..++
T Consensus 136 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 136 LLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFF 215 (481)
T ss_pred HHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 4466664 45567899999999999999999999999999988877 44445689999999988888877777788
Q ss_pred ccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhh
Q 017592 81 QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLF 160 (369)
Q Consensus 81 lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (369)
+||+|+|+..+++.+++++.+++.++.+.+ ........ +. .+ ...+.+ .+ ..+..+..+...+
T Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~----~~--~~~~~~---~~-~~~~~~~~~~~~~ 278 (481)
T TIGR00879 216 LPESPRWLVGKGRVEEARKSLARLRGTSGE---DKELLDEL----EL----ID--IKRSIE---KR-SVQPSWGSLFSST 278 (481)
T ss_pred CCCChHHHHHcCChHHHHHHHHHHhCCCCC---cHHHHHHH----HH----HH--HHHHHH---Hh-hccccHHHHHhcC
Confidence 999999998888877777665554321111 00000000 00 00 000000 00 0001111222222
Q ss_pred cchhhhHH-HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 017592 161 SSKLARTT-ILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA 239 (369)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~ 239 (369)
++ ..++. ....+.++.....++....+.|.+.... +.+.........+..+..+++.++.++++||+
T Consensus 279 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 346 (481)
T TIGR00879 279 RR-IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA-----------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF 346 (481)
T ss_pred ch-hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 22222 2222223322222222333334332111 11111112334455667788899999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHh---h-ccc------hhHHHHHH-HHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHH
Q 017592 240 GRKLSITIMFTLSCLFLLPLV---T-YQS------NILTTGLL-FGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 308 (369)
Q Consensus 240 GRR~~~~~~~~~~~~~~~~~~---~-~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~ 308 (369)
|||+.+..+..+.++..+.+. . ... ........ .....+..+..+..+.+.+|.+|++.|+++.|+.+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 426 (481)
T TIGR00879 347 GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVA 426 (481)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHH
Confidence 999998776555444333322 1 111 11111111 111111222234567888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCC
Q 017592 309 MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSD 362 (369)
Q Consensus 309 ~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e 362 (369)
+.+++++++|.+.+.+.+..+....+.+++++++++.++.+++.||||+++++|
T Consensus 427 ~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 427 ANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 999999999999888777655555677777777777777777789999988765
No 13
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=1.4e-23 Score=202.01 Aligned_cols=284 Identities=16% Similarity=0.118 Sum_probs=171.5
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhhHhhhhHHHHHHHH
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM--------PRLDWRWLLGLSSIPSFILLA 76 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~--------~~~~WR~~~~~~~ip~~i~~~ 76 (369)
.|+|.+ +...+|++|+.|+|+||.+.+..+.++.+|.+++..+...+. ..++||.+|.+++++.++..+
T Consensus 135 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~ 214 (438)
T PRK09952 135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALW 214 (438)
T ss_pred HHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHH
Confidence 366554 556679999999999999999999999999988765544332 258999999999998887777
Q ss_pred HHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH
Q 017592 77 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 156 (369)
Q Consensus 77 ~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (369)
.+..+||||+|..+++|.++++ + +. ...
T Consensus 215 l~~~~~es~~~~~~~~~~~~~~----------------------------~---------------------~~---~~~ 242 (438)
T PRK09952 215 VRNGMEESAEFEQQQHEQAAAK----------------------------K---------------------RI---PVI 242 (438)
T ss_pred HHHhCCCChhHHHHHhhccccc----------------------------c---------------------cC---CHH
Confidence 7778999999864332110000 0 00 001
Q ss_pred HHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 157 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
..++++ ++.........+.....+|....|.|.+.... .+.+.........+.+...+++.++.++++
T Consensus 243 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~----------~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~ 310 (438)
T PRK09952 243 EALLRH--PGAFLKIIALRLCELLTMYIVTAFALNYSTQN----------LGLPRELFLNIGLLVGGLSCLTIPCFAWLA 310 (438)
T ss_pred HHHHHc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111211 12222222233444555666665655433110 111111111222344556677788899999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHhh---ccchhHH-HHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHH-
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLVT---YQSNILT-TGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR- 311 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~- 311 (369)
||+|||+.+..+.++.++..+.... ..+.... ....+...+......+..+.+.+|+||++.|+++.|+++..++
T Consensus 311 Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~ 390 (438)
T PRK09952 311 DRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASV 390 (438)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHH
Confidence 9999999887765544333222211 1111111 1112222222233356678999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 312 IGGMVCPLVAVALVANCH--QMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 312 i~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+++.++|++...+.+..+ ...++.+.+++.+++.+..+. .+||+
T Consensus 391 lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~~~~ 436 (438)
T PRK09952 391 VGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL-MKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH-ccccc
Confidence 899999999988877432 223445455555666555544 46765
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=8.5e-23 Score=196.26 Aligned_cols=281 Identities=17% Similarity=0.188 Sum_probs=165.3
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhhHhhhhHHHHHHHH
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM--------PRLDWRWLLGLSSIPSFILLA 76 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~--------~~~~WR~~~~~~~ip~~i~~~ 76 (369)
.|+|.+ +...+|++|+.|+++||++.+..+.+...|.+++..+...+. +.++||.+|.+++++.++.++
T Consensus 134 ~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~ 213 (432)
T PRK10406 134 QGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW 213 (432)
T ss_pred HHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH
Confidence 355553 677789999999999999999988888888887765443321 358999999999999988888
Q ss_pred HHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH
Q 017592 77 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 156 (369)
Q Consensus 77 ~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (369)
++..+||||++..+ +.++ . .++
T Consensus 214 ~~~~~~e~~~~~~~-----------------~~~~---------------~--------------------------~~~ 235 (432)
T PRK10406 214 LRRQLDETSQQETR-----------------ALKE---------------A--------------------------GSL 235 (432)
T ss_pred HHhcCCCCchHHHh-----------------hhcc---------------c--------------------------ccH
Confidence 88889999875210 0000 0 012
Q ss_pred HHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 157 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
++++++ ++...+....++.....+|+...|.|.+.... .+.+....-....+..+...++..+.++++
T Consensus 236 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~----------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~ 303 (432)
T PRK10406 236 KGLWRN--RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT----------AGMHANVASGIMTAALFVFMLIQPLIGALS 303 (432)
T ss_pred HHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 22222223333444566777777777544211 011111111122233444556677889999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHh--hc-cc-hhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLV--TY-QS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI 312 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i 312 (369)
||+|||+.+.....++++...+.. .. .+ ......+.....+......+..+.+.+|+||+++|+++.|++++++++
T Consensus 304 Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 304 DKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 999999987765544333322221 11 11 111111121121111122345778899999999999999999999885
Q ss_pred -HHHHHHHHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHhccCcCCCCCCC
Q 017592 313 -GGMVCPLVAVALVANCHQMT-AVVLLVVVIVTSILSVMLIPFETKGQELS 361 (369)
Q Consensus 313 -~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~pETkg~~l~ 361 (369)
++...|++...+ +..+... .+++.+++.+++.+..++ .|++||++.
T Consensus 384 ~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~--l~~~~~~~~ 431 (432)
T PRK10406 384 LFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM--LHRKGKGMR 431 (432)
T ss_pred HHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH--hhhcccccC
Confidence 455678777644 4333222 333344445555554443 477888753
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=2.1e-21 Score=182.24 Aligned_cols=268 Identities=13% Similarity=0.082 Sum_probs=170.3
Q ss_pred eeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHH-HHHHHhhccCC
Q 017592 8 WERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFI-LLAFLGFQPES 84 (369)
Q Consensus 8 ~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i-~~~~~~~lpES 84 (369)
.|+|.+ +...+.++|+.|+|+||++.++.+.++++|.+++..+...+.+..+||..|.+.++++++ .++.++++||+
T Consensus 89 ~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 89 AALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 355554 334456799999999999999999999999999988887777789999999886555444 45567789999
Q ss_pred hhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchh
Q 017592 85 PRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKL 164 (369)
Q Consensus 85 P~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (369)
|++.. +..+..+ ..++++++++++
T Consensus 169 p~~~~---~~~~~~~----------------------------------------------------~~~~~~~ll~~~- 192 (368)
T TIGR00903 169 PFQAA---EGFGFKD----------------------------------------------------AVKEFGALAGRK- 192 (368)
T ss_pred CCCCC---CCcchHH----------------------------------------------------HHHHHHHHHcCh-
Confidence 98631 1000000 001234444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh--
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK-- 242 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR-- 242 (369)
.....+..++.....+|++..|.|.+.... +.+ .. ......+..+.+.+..++++||..||
T Consensus 193 --~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~-----------g~s-~~---~~~~~~l~~~~g~~g~~~~~d~~~r~~~ 255 (368)
T TIGR00903 193 --DLWIIGAILGFGVALFDNLAIWLEAALRPA-----------GLE-DI---AGDAVALAILAGLIGVAVIPDRVARAGL 255 (368)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------CCC-hH---HHHHHHHHHHHHHHHHHHhhHHhhhhhh
Confidence 234445556667777888888888765321 111 11 12223344455566678888987654
Q ss_pred -HHHHH-HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 243 -LSITI-MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 243 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.... ...++++.........+......+.....++....++..+.+.+|++|++.|+++.|+.+..++++++.+|..
T Consensus 256 r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~ 335 (368)
T TIGR00903 256 RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALA 335 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHH
Confidence 33222 2222232222222222222223333333344445556788999999999999999999999999999999988
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHh
Q 017592 321 AVALVANCHQMTAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 350 (369)
.+.+.. +....+..++...+++.+.+.+
T Consensus 336 ~~~~~~--~~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 336 AMLFIS--SAEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHHHHh
Confidence 876663 3344567777777777666653
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.86 E-value=2.5e-19 Score=170.64 Aligned_cols=279 Identities=22% Similarity=0.288 Sum_probs=168.1
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lp 82 (369)
+.|++.+ +...+++.|+.|+++||+..++.+.+..+|.+++..+...+....+||..+.+.++..++. .+...++|
T Consensus 112 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (406)
T PRK11551 112 LTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLP 191 (406)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3466554 4556789999999999999999999999999998877766666789999998876654444 44556789
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+|++...+++.++.++ .....+++
T Consensus 192 ~~~~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~ 216 (406)
T PRK11551 192 ESRAFAQAAGAGKQRAP-------------------------------------------------------VLRALFGE 216 (406)
T ss_pred CChhHHhccCcchhhhh-------------------------------------------------------hHHHHhhh
Confidence 99876432211000000 00111111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+..++....+..++.....+|....+.|.+.... +.+...........++..+++.++.+++.||+|||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (406)
T PRK11551 217 GRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQ-----------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR 285 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 1112222223333333344455555555443211 11111112233455677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
+.+..+....++.........+........+...++..+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g 365 (406)
T PRK11551 286 RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAG 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHh
Confidence 98877555444433333322222222222222233333455677889999999999999999999999999999999998
Q ss_pred HHHhhchhhH-HHHHHHHHHHHHHHHHHhc
Q 017592 323 ALVANCHQMT-AVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 323 ~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 351 (369)
.+.+..+... .+.....+.+++.+..+..
T Consensus 366 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 366 QLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8876543322 2333333344444444433
No 17
>PRK15075 citrate-proton symporter; Provisional
Probab=99.86 E-value=2.7e-19 Score=172.05 Aligned_cols=255 Identities=15% Similarity=0.192 Sum_probs=148.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh--------ccCCCchhhHhhhhHHHHHHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII--------MPRLDWRWLLGLSSIPSFILL 75 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~--------~~~~~WR~~~~~~~ip~~i~~ 75 (369)
+.|+|.+ +...+|++|+.|+++||+..++.+....+|..++..++..+ .+.++||.+|.+++++.++.+
T Consensus 126 l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 205 (434)
T PRK15075 126 LQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIF 205 (434)
T ss_pred HhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 4466654 44567999999999999999998888777776665554432 246899999998876655555
Q ss_pred HHHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhH
Q 017592 76 AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSL 155 (369)
Q Consensus 76 ~~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (369)
+.+..+||++++...+++ . + .++ .
T Consensus 206 ~~~~~~~e~~~~~~~~~~-----------------~---------------~---------------------~~~---~ 229 (434)
T PRK15075 206 LIRRSLEETEEFLARKHR-----------------P---------------S---------------------MRE---I 229 (434)
T ss_pred HHHHhcCCCHHHHHhhhc-----------------c---------------c---------------------ccc---H
Confidence 555567776544211000 0 0 000 0
Q ss_pred HHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHH
Q 017592 156 FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAIL 235 (369)
Q Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l 235 (369)
++...+ .++.........+.+...++++..|.|.+.+.. .+.+.........+..+..+++.++.+++
T Consensus 230 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 297 (434)
T PRK15075 230 FRSLAA--NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV----------LHLSAADSLLVTLCVGVSNFIWLPIGGAL 297 (434)
T ss_pred HHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 122222222333334455666767777654211 01111111223345566778888999999
Q ss_pred HhhhchhHHHHHHHHHHHHHHHHH--hh-ccchhHHH-HHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHH
Q 017592 236 VDTAGRKLSITIMFTLSCLFLLPL--VT-YQSNILTT-GLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 236 ~dr~GRR~~~~~~~~~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
+||+|||+.+..+..++.+..... .. ........ .......++.....+..+.+.+|.+|++.|+++.++.+++++
T Consensus 298 ~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~ 377 (434)
T PRK15075 298 SDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLAT 377 (434)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHH
Confidence 999999998876544333222111 11 11111111 111112222222234566789999999999999999988887
Q ss_pred H-HHHHHHHHHHHHHhhch
Q 017592 312 I-GGMVCPLVAVALVANCH 329 (369)
Q Consensus 312 i-~~~~~p~~~~~l~~~~~ 329 (369)
. ++.++|.+.+.+.+..+
T Consensus 378 ~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 378 AIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHhhhHHHHHHHHHHhcC
Confidence 5 58889998888777654
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.85 E-value=2.8e-19 Score=171.39 Aligned_cols=266 Identities=17% Similarity=0.161 Sum_probs=159.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|+|.+ +....++.|+.|+|+||++.++.+.++.+|.+++..+...+....+||.++.++.++.++.+.+....||
T Consensus 115 l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~ 194 (426)
T PRK12307 115 IVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPE 194 (426)
T ss_pred HHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3466543 5566789999999999999999999999999988776655566689999999887777766666667899
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
+++|...+.+ + ++ + + .+.. . +. ....+++.++++
T Consensus 195 ~~~~~~~~~~--~-------------~~-~--------~---~~~~---------------~-~~---~~~~~~~~~~~~ 228 (426)
T PRK12307 195 SKEWEEAKLS--G-------------KG-K--------H---SQSA---------------W-SV---FSLSMKGLFNRA 228 (426)
T ss_pred ChHHHHhhhh--c-------------cc-c--------c---cccc---------------h-hh---hhHHHHHHHhhc
Confidence 8876421110 0 00 0 0 0000 0 00 001344455544
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
..+...+.....+.....++.+..+.|.+.... +.+.........+..++.+++.++.+.+.||+|||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 229 QFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-----------GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 333333222222222222233333444333110 111111122234456678888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh-ccchhHHH-HHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVT-YQSNILTT-GLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
.+..+.+++++..+.... ........ .+.+...+...+..+..+.+..|.+|++.|+++.|+.+.++++++.++|.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 298 TFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence 888776655444333322 22221111 1111111122233445677889999999999999999999999999999998
Q ss_pred HHHHhhch
Q 017592 322 VALVANCH 329 (369)
Q Consensus 322 ~~l~~~~~ 329 (369)
..+.+..+
T Consensus 378 g~l~~~~g 385 (426)
T PRK12307 378 TWLGITMG 385 (426)
T ss_pred HHHHHccc
Confidence 88877655
No 19
>TIGR00895 2A0115 benzoate transport.
Probab=99.85 E-value=7.6e-19 Score=166.15 Aligned_cols=280 Identities=24% Similarity=0.310 Sum_probs=171.4
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhh-HHHHHHHHHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSS-IPSFILLAFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~-ip~~i~~~~~~~lp 82 (369)
+.|++.+ +...+++.|+.|+++|++..++.+..+.+|..+++.+...+.+..+||..+.+.+ ++.+...+...++|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence 3455554 5667899999999999999999999999999998877766667789999998885 45555556667899
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+|++...+ +.+++.+..++....+..+. +.+.++.+ . + .+........++++
T Consensus 194 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-------------~-~---~~~~~~~~~~~~~~ 246 (398)
T TIGR00895 194 ESIDFLVSK-RPETVRRIVNAIAPQMQAEA---------QSALPEQK-------------A-T---QGTKRSVFKALFQG 246 (398)
T ss_pred CCChHHHhc-CHHHHHHHHHHHHHhccccc---------cccccccc-------------c-c---cchhhHHHHHHhcc
Confidence 999988655 45555555555433221100 00000000 0 0 00001123334444
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+..++....+...+.....++....+.|.+.... +.+....-....+..+..+++.++.+.++||+|||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 247 KTARITVLLWLLYFMLLVGVYFLTNWLPKLMVEL-----------GFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 4445555555545555555666666666433211 11111112233455677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
+........+...........+........+...++.....+..+.+..|.+|++.|+++.|+.+.++.++++++|.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 316 VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 55544333332222222212222222233333334444556678899999999999999999999999999999998876
Q ss_pred HH
Q 017592 323 AL 324 (369)
Q Consensus 323 ~l 324 (369)
.+
T Consensus 396 ~l 397 (398)
T TIGR00895 396 YL 397 (398)
T ss_pred hc
Confidence 43
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=1.8e-18 Score=165.54 Aligned_cols=288 Identities=19% Similarity=0.050 Sum_probs=176.2
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCChhhHhhcCC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGR 93 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g~ 93 (369)
+...+++.|+.|+++|++..++.+....+|..++..++..+....+||+.+.+.++..++..+..+.+||+|+.. +.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~ 206 (417)
T PRK10489 129 TALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR 206 (417)
T ss_pred HHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc
Confidence 344567889999999999999999999999888877776655557899999888887777766667788765320 000
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHHH
Q 017592 94 TAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWL 173 (369)
Q Consensus 94 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 173 (369)
. + + . +.....++..++++..+..++...
T Consensus 207 ~-~----------------~---~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (417)
T PRK10489 207 E-H----------------P---L--------------------------------RSLLAGFRFLLASPVVGGIALLGG 234 (417)
T ss_pred c-c----------------c---h--------------------------------HHHHHHHHHHHcChHHHHHHHHHH
Confidence 0 0 0 0 000012233333333222222211
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHH
Q 017592 174 LLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSC 253 (369)
Q Consensus 174 ~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~ 253 (369)
... .+++...+.|.+.... .+.+....-.......++.+++.++.+++.||.++|+.+..+..+.+
T Consensus 235 ~~~----~~~~~~~~~p~~~~~~----------~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~ 300 (417)
T PRK10489 235 LLT----MASAVRVLYPALADEV----------WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSF 300 (417)
T ss_pred HHH----HHHhHHHhhHHHHHhc----------cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHH
Confidence 111 1223333444332110 01111111122234456778888899999999877777666555444
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 017592 254 LFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTA 333 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~ 333 (369)
+..+......+......+.+...+.........+.+..|.+|.+.|+++.|+.+....++..++|.+.+.+.+..+...+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~ 380 (417)
T PRK10489 301 LAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVAS 380 (417)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhH
Confidence 43333322222222222222222222222344567889999999999999999999999999999999988887665556
Q ss_pred HHHHHHHHHHHHHHHHhccCcCCCCCCCCcccccCC
Q 017592 334 VVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTSD 369 (369)
Q Consensus 334 ~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~~~~~ 369 (369)
+..++++.++..++.+...||+|++++||+.+|.+|
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (417)
T PRK10489 381 ASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDASD 416 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 666776666655666666689999999999999887
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.83 E-value=1.2e-18 Score=165.29 Aligned_cols=278 Identities=17% Similarity=0.179 Sum_probs=160.9
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCC--chhhHhhhhHHHHHHHHHHhhc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD--WRWLLGLSSIPSFILLAFLGFQ 81 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~--WR~~~~~~~ip~~i~~~~~~~l 81 (369)
+.|+|.+ +...+++.|+.|+++|++..++.+.++.+|.+++..+...+....+ ||..+.+++++.++.++....+
T Consensus 109 l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 188 (405)
T TIGR00891 109 VIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNI 188 (405)
T ss_pred HHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 4466654 5566789999999999999999999999999988877666554444 9999999988888877777889
Q ss_pred cCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhc
Q 017592 82 PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS 161 (369)
Q Consensus 82 pESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (369)
||+|++...+++.++..+..++.. +.+ + . .... . +..........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~-------~~~~---------~-----------~~~~~~~~~~~- 233 (405)
T TIGR00891 189 PEAEDWKEKHAGKALVRTMVDILY---GGE-H---R-------IANI---------V-----------MTLAAAMVQSA- 233 (405)
T ss_pred CCChhHHHHhhhhhhhhhHHHHHh---ccc-h---h-------hhhh---------h-----------hhhhHHhhhhh-
Confidence 999988643332222211111111 000 0 0 0000 0 00000011100
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 017592 162 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GR 241 (369)
++.+................+++...+.|.+.... .+.+....-.......++.+++.++.+++.||+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~ 303 (405)
T TIGR00891 234 GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD----------LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGR 303 (405)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH----------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 11111111122222222222222222333222100 01111111122345567788899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHh-hccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITIMFTLSCLFLLPLV-TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 242 R~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
|+.+..+...+.+...... ...+........+...++..+.++..+.+.+|.+|++.|+++.|+.+.++.+++.++|.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~ 383 (405)
T TIGR00891 304 RKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPII 383 (405)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHH
Confidence 9988776655433322222 222222222222222233334456677889999999999999999999999999999999
Q ss_pred HHHHHhhch
Q 017592 321 AVALVANCH 329 (369)
Q Consensus 321 ~~~l~~~~~ 329 (369)
.+.+.+..+
T Consensus 384 ~g~l~~~~g 392 (405)
T TIGR00891 384 GALLAQRLD 392 (405)
T ss_pred HHHHHHhcc
Confidence 998887654
No 22
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.81 E-value=6.6e-18 Score=161.30 Aligned_cols=279 Identities=15% Similarity=0.170 Sum_probs=158.1
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc------cCCCchhhHhhhhHHHHHH-HH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM------PRLDWRWLLGLSSIPSFIL-LA 76 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~------~~~~WR~~~~~~~ip~~i~-~~ 76 (369)
+.|++.+ +....++.|+.|+++||+..++++.++.+|.+++..++..+. +..+||..|.+.+++.++. .+
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~ 184 (412)
T TIGR02332 105 LVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM 184 (412)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 3466654 455568899999999999999999999999998877765543 2369999999988887765 44
Q ss_pred HHhhccCChh---hHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchh
Q 017592 77 FLGFQPESPR---YLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGL 153 (369)
Q Consensus 77 ~~~~lpESP~---~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (369)
.++++||+|+ |+..+ +++..++..+.+..+ .++.++. .+ . +.....
T Consensus 185 ~~~~~~~~p~~~~~l~~~-----~~~~~~~~~~~~~~~-------------~~~~~~~------~~-----~--~~~~~~ 233 (412)
T TIGR02332 185 TWFWLDDSPDKAKWLDEE-----DKKALKEMIDNDQLT-------------LEQPEGA------FA-----H--AAMPQR 233 (412)
T ss_pred HhhccCCCcccCCCCCHH-----HHHHHHHHHHhcccc-------------ccccccc------cc-----c--ccccHH
Confidence 5667899994 44321 111111111101000 0000000 00 0 000001
Q ss_pred hHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHH
Q 017592 154 SLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAA 233 (369)
Q Consensus 154 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~ 233 (369)
..++.++++. .......+++....+++...|.|.+.+.. ..+.+....-.......++.++|.++.+
T Consensus 234 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---------~~~~s~~~~~~~~~~~~l~~~~g~l~~g 300 (412)
T TIGR02332 234 SMLREIFTPA----IMLYTLAYFCLTNTLSAINIWTPQILQSF---------NQGSSNIMIGLLAAIPQFCTIFGMIWWS 300 (412)
T ss_pred HHHHHhcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCCcHHHhHHHhhHHHHHHHHHHHHHH
Confidence 1233333322 23333444555566777777777655310 0011111111223455677888999999
Q ss_pred HHHhhhchhHHH-HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHH
Q 017592 234 ILVDTAGRKLSI-TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI 312 (369)
Q Consensus 234 ~l~dr~GRR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i 312 (369)
+++||+|||+.. .......++.........+............+......+..+....|.+|++.|+++.|+.+..+++
T Consensus 301 ~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~ 380 (412)
T TIGR02332 301 RHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNI 380 (412)
T ss_pred HHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhh
Confidence 999999977753 3333222222211111112221111111111111122334566778999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhch
Q 017592 313 GGMVCPLVAVALVANCH 329 (369)
Q Consensus 313 ~~~~~p~~~~~l~~~~~ 329 (369)
+++++|.+.+.+.+..+
T Consensus 381 g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 381 GSALSPFLIGILKDATG 397 (412)
T ss_pred hhhhhhhhcccccccCC
Confidence 99999998887777553
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.81 E-value=1.7e-17 Score=159.66 Aligned_cols=294 Identities=14% Similarity=0.108 Sum_probs=163.2
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESP~~l~~~g 92 (369)
+...+++.|+.|+++||+..++.+....+|.+++..+...+.+..+||..|.+.+++.++. ++..+++||+|++.....
T Consensus 130 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~ 209 (434)
T PRK11663 130 PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPS 209 (434)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCC
Confidence 5566789999999999999999999999999998877666666789999999887766544 445567899987631110
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHH-HhhcchhhhHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFL-MLFSSKLARTTILL 171 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~ 171 (369)
..++. + +..+.++ + . + +.+.+....++ ..+++ ++....
T Consensus 210 ~~~~~-------------~---------~~~~~~~-----------~-~-~---~~~~~~~~~~~~~~~~~---~~~~~~ 248 (434)
T PRK11663 210 VGEWR-------------H---------DALELAQ-----------Q-Q-E---GAGLSRKEILTKYVLLN---PYIWLL 248 (434)
T ss_pred ccccc-------------c---------cccccch-----------h-c-c---ccCCChhhhHHHHHhcC---hHHHHH
Confidence 00000 0 0000000 0 0 0 00000000011 11111 112222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh--chh-HHHHHH
Q 017592 172 WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA--GRK-LSITIM 248 (369)
Q Consensus 172 ~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~--GRR-~~~~~~ 248 (369)
....+.....++++..|.|.+.... .+.+....-....+..++.+++.++.++++||+ +|| ......
T Consensus 249 ~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 249 SFSYVLVYVVRAAINDWGNLYMSET----------LGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----------cCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 2223334445556655666543210 011111111223344567788999999999999 333 322221
Q ss_pred HH--HHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 249 FT--LSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 249 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
.. ......+......+......+.+...++..+.......+.+|.+|++.|+++.|+.+..+.+++.++|...+++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 319 AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 11 1111111111111111111222222222222233445677899999999999999999999999999999998888
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 327 NCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
..+....+...+++.+++.+..+++.++.+++
T Consensus 399 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 399 IWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 76655566666777666666665555555544
No 24
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.79 E-value=4.2e-17 Score=153.90 Aligned_cols=257 Identities=19% Similarity=0.208 Sum_probs=152.8
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhhHhhhhHHHHHHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM--------PRLDWRWLLGLSSIPSFILL 75 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~--------~~~~WR~~~~~~~ip~~i~~ 75 (369)
+.|+|.+ +...+++.|+.|+++||.+.+..+.+..+|.+++..+..... ..++||.++.+.++..++..
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 105 IQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 3466553 556679999999999999999999999999988776554321 35799999999888777777
Q ss_pred HHHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhH
Q 017592 76 AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSL 155 (369)
Q Consensus 76 ~~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (369)
+....+||+|++...+++ .+ +. + .+
T Consensus 185 ~~~~~~~~~~~~~~~~~~----------------~~---------------~~--------------------~----~~ 209 (394)
T TIGR00883 185 YLRRNLEETPVFEKAQEK----------------HK---------------KK--------------------R----GP 209 (394)
T ss_pred HHHHhcCCChhHHHHHhc----------------cc---------------cc--------------------c----CC
Confidence 666778988765321100 00 00 0 01
Q ss_pred HHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHH
Q 017592 156 FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAIL 235 (369)
Q Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l 235 (369)
+.+.++++ +++........+.....++....+.|.+.... .+.+.........+..+...++.++.+.+
T Consensus 210 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 278 (394)
T TIGR00883 210 IRETLTKH-RKPFLLGLGLVIATTTTFYLITTYLPTYLTQT----------LGLSANSALLVLMLSLILFFITIPLSGAL 278 (394)
T ss_pred HHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 12233333333333444454444444433110 01111111222344556677888899999
Q ss_pred HhhhchhHHHHHHHHHHHHHH--HHHhh-c-cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHH-
Q 017592 236 VDTAGRKLSITIMFTLSCLFL--LPLVT-Y-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG- 310 (369)
Q Consensus 236 ~dr~GRR~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~- 310 (369)
+||+|||+.+.....+.++.. ..... . .+............++....++..+.+.+|++|++.|+++.++.+.++
T Consensus 279 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 358 (394)
T TIGR00883 279 SDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAG 358 (394)
T ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHH
Confidence 999999998765443333222 11111 1 122222222222222233445677889999999999999999977665
Q ss_pred HHHHHHHHHHHHHHHhhch
Q 017592 311 RIGGMVCPLVAVALVANCH 329 (369)
Q Consensus 311 ~i~~~~~p~~~~~l~~~~~ 329 (369)
.+++.++|.+.+.+.+..+
T Consensus 359 ~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 359 AIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHhhHHHHHHHHHHHHcC
Confidence 4678899999888877655
No 25
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.78 E-value=4e-17 Score=159.67 Aligned_cols=309 Identities=17% Similarity=0.195 Sum_probs=162.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|++.+ +...+++.|+.|+++|++..++....+.+|.+++..+...+.+..+||..|.+++++.++.++.+..+||
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~ 196 (496)
T PRK03893 117 VIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3455543 4556788999999999999999999999999998887777777889999999888877777677778999
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchh-------hHH
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGL-------SLF 156 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 156 (369)
+++|...+++.++..+..+...+.+. +.......... . .......... . ....... .-+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~----~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~ 262 (496)
T PRK03893 197 AEDWKEKHAGKAPVRTMVDILYRGEH-RIINILLTLAA-----A----AALWFCFAGN---L-QNAAIVAVLGLLCAAIF 262 (496)
T ss_pred chhhhhhccccccchhHHHHHhcchh-HHHHHHHHHHH-----H----HHHHHHHHhh---h-cchhHHHHHHHHHHHHH
Confidence 98875433222111111111100000 00000000000 0 0000000000 0 0000000 000
Q ss_pred H---HhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHH
Q 017592 157 L---MLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAA 233 (369)
Q Consensus 157 ~---~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~ 233 (369)
. ...+++.+..........+......++...+.|.+.+. ..+.+....-.......++.+++.++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~----------~~g~~~~~~g~~~~~~~~~~~~g~~~~g 332 (496)
T PRK03893 263 ISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKT----------DLGYDPHTVANVLFFSGFGAAVGCCVGG 332 (496)
T ss_pred HHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHh----------hcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000111111111111111111112233444443311 0111111212233455667788999999
Q ss_pred HHHhhhchhHHHHHHHHHHHHHHHHHhhc-cchh-HHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHH
Q 017592 234 ILVDTAGRKLSITIMFTLSCLFLLPLVTY-QSNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 234 ~l~dr~GRR~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
+++||+|||+++..+..+..+..+.+... .... ......+.......+.......+..|.+|.+.|+++.|+.+..+.
T Consensus 333 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 412 (496)
T PRK03893 333 FLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGA 412 (496)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhh
Confidence 99999999998877655444433322221 1111 111112221122223345567788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017592 312 IGGMVCPLVAVALVANCHQMTAVVLLVV 339 (369)
Q Consensus 312 i~~~~~p~~~~~l~~~~~~~~~~~~~~~ 339 (369)
+++.++|.+.+.+.+..+....+...+.
T Consensus 413 ~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 413 LGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred HHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 9999999998888776654444444433
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=6.3e-17 Score=152.50 Aligned_cols=294 Identities=18% Similarity=0.193 Sum_probs=161.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|+|.+ +...+++.|+.|+++|++..+..+....+|.+++..++..+....+||+.+.+.++..++..+ ..+.+|
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 3455554 556678999999999999999999999999999888877666678999999988777666544 345577
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+|+-- +...++.++.. .++ . ..+.++. ++. +.. ....++.+++
T Consensus 171 ~~~~~~--~~~~~~~~~~~-------~~~-----~----~~~~~~~--------------~~~-~~~---~~~~~~~~~~ 214 (399)
T TIGR00893 171 DPPQKA--KWLTEEEKYIV-------VGG-----L----LAEQQGK--------------GPS-TPK---KYQIKELLKD 214 (399)
T ss_pred CCCCcc--ccCCHHHHhhc-------chh-----h----ccccccc--------------ccc-CCC---ccchHHHhcC
Confidence 776421 11111110000 000 0 0000000 000 000 0123333333
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+ +........+.....++....+.|.+.... .+.+.........+..+..+++.++.++++||+|||
T Consensus 215 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 281 (399)
T TIGR00893 215 R---RVWGLALGQFLVNIGLGFFLTWFPTYLVQE----------RGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRR 281 (399)
T ss_pred H---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----------hcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2 122222223333333333333444332110 011111111223445667788999999999999999
Q ss_pred H--HHHHHH--HHHHHHH-H-HHhhc-cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHH
Q 017592 243 L--SITIMF--TLSCLFL-L-PLVTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGM 315 (369)
Q Consensus 243 ~--~~~~~~--~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~ 315 (369)
+ ...... ..+.+.. . ..... .+.............+..+..+..+.+.+|.+|++.|+++.|+.+.+..+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 361 (399)
T TIGR00893 282 GKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGI 361 (399)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhh
Confidence 6 221111 1111111 1 11111 11111112222222222334667889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHH
Q 017592 316 VCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 316 ~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~ 349 (369)
++|.+.+.+.+..+ ....+.+.+++.+++.+..+
T Consensus 362 ~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 362 VGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999988877655 44455555655555554443
No 27
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.75 E-value=4.4e-17 Score=148.79 Aligned_cols=284 Identities=21% Similarity=0.254 Sum_probs=176.6
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH--HHhccCCCchhhHhhhhHHHHHHH-HHHhhccCChhhHhh
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA--WIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPESPRYLCL 90 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~--~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESP~~l~~ 90 (369)
|.-...+.-|.|+|+||+..++.+.+.++|..+.+.+. ..+..+.+||..|++.++.+++.. +.++.+.++|+=.
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~-- 213 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE-- 213 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc--
Confidence 44456788999999999999999999999998887776 556667799999999887766654 4455566666321
Q ss_pred cCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchh-hHHHHhhcchhhhHHH
Q 017592 91 KGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGL-SLFLMLFSSKLARTTI 169 (369)
Q Consensus 91 ~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ 169 (369)
| +|+-+- .+.++.+. + +++ ++++....+ .-.+..+++|.
T Consensus 214 -G-------------------LP~ie~--~~~d~~e~-------~---~~~---~~~~~ls~~~i~~~YVL~Nk~----- 253 (448)
T COG2271 214 -G-------------------LPPIEE--YRGDPLEI-------Y---EEE---KENEGLTAWQIFVKYVLKNKL----- 253 (448)
T ss_pred -C-------------------CCCHHH--hhcCchhh-------h---hhh---ccCCCccHHHHHHHHHHcChH-----
Confidence 1 111000 00000000 0 000 000000000 01122233322
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh--chhHH
Q 017592 170 LLWLLLFGNSFAY---YAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA--GRKLS 244 (369)
Q Consensus 170 ~~~~~~~~~~~~~---y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~--GRR~~ 244 (369)
+|.+..++.+.| |++.-|.|.+....+ +.+..+......+.-.++++|.+++|+++||+ |||..
T Consensus 254 -iW~la~a~vfvYivR~gi~dW~p~YL~e~k----------~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p 322 (448)
T COG2271 254 -IWLLALANVFVYVVRYGINDWGPLYLSEVK----------GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGP 322 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhhhHHHHHHHhc----------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccch
Confidence 344444555444 788888886543211 12222223444566678999999999999995 89988
Q ss_pred HHHHHHHHHHHHHHHhh-c--cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHH-HHHHHHHH
Q 017592 245 ITIMFTLSCLFLLPLVT-Y--QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI-GGMVCPLV 320 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i-~~~~~p~~ 320 (369)
....+.+...+.+..+. . .+..+..++++..++++.+..-++-....|.-|-+.-+++.|+...++.+ |+..+...
T Consensus 323 ~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~ 402 (448)
T COG2271 323 MALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLP 402 (448)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCc
Confidence 76655544444333332 2 22345556666666766676667788899999999999999999999998 88888777
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHh
Q 017592 321 AVALVANCHQMTAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 350 (369)
.+++.+..++...|+++.+.++++.+..+.
T Consensus 403 ~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 403 LGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred ceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 776667666666676666666555544443
No 28
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.75 E-value=7.3e-17 Score=156.68 Aligned_cols=299 Identities=13% Similarity=0.087 Sum_probs=160.8
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC---CCchhhHhhhhHHHHHHH-HHHhh
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR---LDWRWLLGLSSIPSFILL-AFLGF 80 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~---~~WR~~~~~~~ip~~i~~-~~~~~ 80 (369)
.|++.+ +...+++.|+.|+++||++.++.+....+|.++++.++...... .+||..|.+.+++.++.. +.++.
T Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 132 SGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 355433 56667899999999999999999999999999887765443322 369998887666655543 34445
Q ss_pred ccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHH-Hh
Q 017592 81 QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFL-ML 159 (369)
Q Consensus 81 lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 159 (369)
.+++|+... ..++ ++.. ++.. ..+ ++.. + +++......+. ..
T Consensus 212 ~~~~p~~~~---~~~~-~~~~------~~~~----------~~~-~~~~-------------~---~~~~~~~~~~~~~~ 254 (467)
T PRK09556 212 GSDSPEELG---WGKA-EEIF------GEPI----------SEE-DKET-------------E---STDMTKWQIFVEYV 254 (467)
T ss_pred CCCChhhcC---CCCh-hhcc------cCcc----------chh-hhcc-------------c---cccCcHHHHHHHHH
Confidence 677664311 1000 0000 0000 000 0000 0 00000000111 12
Q ss_pred hcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 017592 160 FSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA 239 (369)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~ 239 (369)
++++ ......+..+.....+++...|.|.+.... .+.+............++.+++.++.++++||+
T Consensus 255 l~~~---~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~----------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~ 321 (467)
T PRK09556 255 LKNP---VIWLLCFANIFLYIVRIGIDNWSPVYAFQE----------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA 321 (467)
T ss_pred HcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 222333333444455666666777543210 111111112223445567889999999999999
Q ss_pred chhHHHHHHHHHHHHHH-HHHhhc-cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHH-HHHH
Q 017592 240 GRKLSITIMFTLSCLFL-LPLVTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI-GGMV 316 (369)
Q Consensus 240 GRR~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i-~~~~ 316 (369)
|||+.+........... +..... .+.....++.+...++..+.....+....|.+|.+.|+++.|+.+.++.+ ++++
T Consensus 322 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~ 401 (467)
T PRK09556 322 NGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF 401 (467)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH
Confidence 99987655432222211 111111 22222222222222222233333446677999999999999999999997 6689
Q ss_pred HHHHHHHHHh------------hchhhHHHHHHHHHHHHHHHHHHhc-cCcCC
Q 017592 317 CPLVAVALVA------------NCHQMTAVVLLVVVIVTSILSVMLI-PFETK 356 (369)
Q Consensus 317 ~p~~~~~l~~------------~~~~~~~~~~~~~~~~i~~~~~~~~-~pETk 356 (369)
+|.+.+.+.+ ..+....+.++.++.+++.+..++. ..|+|
T Consensus 402 ~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 454 (467)
T PRK09556 402 AKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVAVMEER 454 (467)
T ss_pred HhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988887 3334445555555555555444332 13554
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.74 E-value=5.2e-16 Score=150.11 Aligned_cols=300 Identities=14% Similarity=0.145 Sum_probs=155.1
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHH-HHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhcc
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVS-EAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQP 82 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~-~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lp 82 (369)
.|++.+ +.....+.|+.|+++||+..++.+.+..+|..+ +.++........+||..|++.+++.++. ++..+++|
T Consensus 130 ~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 130 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred HHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 355443 344567889999999999999999988887643 3332222222359999998887766654 45567789
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHH-Hhhc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFL-MLFS 161 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 161 (369)
|+|+....+. .+|.+ + +.+ + +.++.+ + +.++....+. ..++
T Consensus 210 ~~~~~~~~~~-~~~~~-------~----~~~-~--------~~~~~~-------------~----~~~~~~~~~~~~~~~ 251 (452)
T PRK11273 210 DTPQSCGLPP-IEEYK-------N----DYP-D--------DYNEKH-------------E----QELTAKQIFMQYVLP 251 (452)
T ss_pred CCHhhcCCCC-hhhhh-------h----ccc-c--------cccccc-------------C----CCccHHHHHHHHHHc
Confidence 9987531111 11100 0 000 0 000000 0 0000000111 1222
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh--
Q 017592 162 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-- 239 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~-- 239 (369)
++. .....+..+.....+|+...+.|.+.+.. .+.+.........+..++.+++.++.++++||+
T Consensus 252 ~~~---~~~~~l~~~~~~~~~~~~~~~~P~~l~~~----------~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 252 NKL---LWYIAIANVFVYLLRYGILDWSPTYLKEV----------KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred ChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 221 22222222222334456666666554211 011111111223345567788899999999999
Q ss_pred chhHHHH-HHHHHHHHHHHHHhh-cc-chhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHH
Q 017592 240 GRKLSIT-IMFTLSCLFLLPLVT-YQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMV 316 (369)
Q Consensus 240 GRR~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~ 316 (369)
|||.... ....+..+....... .. +......+.+.......+.......+..|.+|++.|+++.|+.+..+.+++.+
T Consensus 319 ~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 398 (452)
T PRK11273 319 GNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSV 398 (452)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHH
Confidence 5564332 211211111111111 11 11112222222222222223334567789999999999999999999888655
Q ss_pred -HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH-hccCcCCCC
Q 017592 317 -CPLVAVALVANCHQMTAVVLLVVVIVTSILSVM-LIPFETKGQ 358 (369)
Q Consensus 317 -~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~-~~~pETkg~ 358 (369)
+|.+.+.+.+..+....+.+.+++++++.+... ...+|+|++
T Consensus 399 ~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 399 AASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred hhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 688888888776655566666666665554443 333566543
No 30
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.72 E-value=1.3e-14 Score=141.67 Aligned_cols=273 Identities=16% Similarity=0.112 Sum_probs=157.8
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhhHhhhhHHHHHHHHHHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-RLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~-~~~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g 92 (369)
+...++..|+.|+++||++.++.+.++.+|.++++.+...+.+ ..|||.+|.+.++..++..+..+++||+|+.- .
T Consensus 126 i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~ 202 (491)
T PRK11010 126 IVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---P 202 (491)
T ss_pred HHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---c
Confidence 4556789999999999999999999999999998877766666 46999999998887777766666789876421 0
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLW 172 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 172 (369)
+ ++..+ + ....++.++++++.....++..
T Consensus 203 ~-~~~~~---------------------------~-----------------------~~~~~l~~~~~~~~~~~~ll~~ 231 (491)
T PRK11010 203 V-PKTLE---------------------------Q-----------------------AVVAPLRDFFGRNNAWLILLLI 231 (491)
T ss_pred c-ccchh---------------------------h-----------------------hHHHHHHHHHcCcCHHHHHHHH
Confidence 0 00000 0 0001234444433222222222
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhccccccCCCCcccCCCCChhhHHH-HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHH
Q 017592 173 LLLFGNSFAYYAVVLL-ISELSSLDTRCRSPLMFSHHPQDANLYID-EFITSLAEIPGLLLAAILVDTAGRKLSITIMFT 250 (369)
Q Consensus 173 ~~~~~~~~~~y~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~ 250 (369)
.... ...+....+ .|.+... .+.+....-.. ..+..++.++|.++.+.++||+|||+.+..+.+
T Consensus 232 ~l~~---~~~~~~~~~~~~~l~~~-----------~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~ 297 (491)
T PRK11010 232 VLYK---LGDAFAMSLTTTFLIRG-----------VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGI 297 (491)
T ss_pred HHHH---HHHHHHHHHHHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1111 111111111 2222110 01111111111 123345778899999999999999887765444
Q ss_pred HHHHHHHH---Hhhccchh-HHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 251 LSCLFLLP---LVTYQSNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 251 ~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.++..+. +....++. ......++..++.....+..+.+..++.|.+.+++..|+.+....+++.+.+.+.+.+.+
T Consensus 298 l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~ 377 (491)
T PRK11010 298 LQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE 377 (491)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32322211 11211121 111112221111122234567888899999999999999999998888877777788877
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 327 NCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
..+....+.+.+++.+.+.+..+++ +++
T Consensus 378 ~~G~~~~f~~~~~~~l~~l~~~~~~-~~~ 405 (491)
T PRK11010 378 AHGWPTFYLFSVAAAVPGLLLLLVC-RQT 405 (491)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 6665555666666666665555544 444
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.72 E-value=9.1e-16 Score=147.80 Aligned_cols=293 Identities=16% Similarity=0.154 Sum_probs=155.8
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHH-HhccCCCchhhHhhhhHHHHHH-HHHHhhccCChhhHhhc
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAW-IIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLK 91 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~-~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESP~~l~~~ 91 (369)
+....++.|+.|+++||.+.++.+....+|..++..+.. ......+||..|.+.++..++. ++..+.+||+|+....+
T Consensus 137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 216 (438)
T TIGR00712 137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP 216 (438)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC
Confidence 445568899999999999999999999998887665443 3333468999999987776664 45566789988653110
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH-HHhhcchhhhHHHH
Q 017592 92 GRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF-LMLFSSKLARTTIL 170 (369)
Q Consensus 92 g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~ 170 (369)
+ .+.. + + +.+. +..+. .+ ++. .....+ ...++++. ...
T Consensus 217 -~-~~~~------~--~--~~~~---------~~~~~---------------~~-~~~-~~~~~~~~~~~~~~~---~~~ 255 (438)
T TIGR00712 217 -P-IEEY------R--N--DYPD---------DYNEK---------------AE-QEL-TAKEIFMQYVLPNKL---LWY 255 (438)
T ss_pred -C-chhc------c--c--cccc---------ccccc---------------cc-ccc-chHHHHHHHHccCch---HHH
Confidence 0 0000 0 0 0000 00000 00 000 000011 12232221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH-HHHHHH
Q 017592 171 LWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL-SITIMF 249 (369)
Q Consensus 171 ~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~-~~~~~~ 249 (369)
.....+.....+|+...+.|.+.+.. .+.+.........+..+..+++.++.++++||+||++ ......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 325 (438)
T TIGR00712 256 IAIANVFVYLLRYGVLDWSPTYLKEV----------KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVF 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHc----------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHH
Confidence 11112222233455555555443210 0111111122334556677889999999999996433 222211
Q ss_pred HH-HH-HHHHHHhhc-c-chhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHH-HHHHHHHHHH
Q 017592 250 TL-SC-LFLLPLVTY-Q-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGG-MVCPLVAVAL 324 (369)
Q Consensus 250 ~~-~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~-~~~p~~~~~l 324 (369)
.. .. +........ . +........+...+...+..........|.+|++.|+++.|+.+..+.+++ +++|.+.+.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 326 FMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 11 11 111111111 1 112111112222221122222234567899999999999999999988875 5789998888
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 325 VANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
.+..+....+.+.++..+++.+..++++||.|.
T Consensus 406 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 406 VDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 876655555666666666667777777788763
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.71 E-value=7.2e-15 Score=139.72 Aligned_cols=275 Identities=12% Similarity=-0.009 Sum_probs=157.6
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|+|.+ +...+++.|+.|+++||++.++.+.....|.+++..++..+....+||..+.+.++..++..+.....||
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 200 (399)
T PRK05122 121 LLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPA 200 (399)
T ss_pred HHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4466664 4445678899999999999999888888888887777766666789999888766655544433333343
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
++. +++ + + .++.+.++ +
T Consensus 201 ~~~----~~~--~------------------------------~--------------------------~~~~~~~~-~ 217 (399)
T PRK05122 201 VPP----VKG--E------------------------------R--------------------------LPFRRVLG-R 217 (399)
T ss_pred CCC----CCc--c------------------------------c--------------------------hhHHHHHH-H
Confidence 210 000 0 0 00111111 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
.++.... +....+.++....+.+.+.... +..... .......++.+++.++.+.+.||+|||+
T Consensus 218 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 218 VWPYGMG----LALASIGFGTIATFITLYYAAR-----------GWDGAA--LALTLFGVAFVGARLLFGNLINRLGGLR 280 (399)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-----------ccccch--HHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 1111111 1111122222222222221110 011111 1223445566788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
.+..+..+.++.........+.........+..++....++.......|.+|.+.|+++.|+.+....++..++|.+...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 360 (399)
T PRK05122 281 VAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGL 360 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776555444433333322222222222222222222334445567799999999999999999988988888878787
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCC
Q 017592 324 LVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSD 362 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e 362 (369)
+.+..+....+...+++.+++.+..+++ ++.+++..+|
T Consensus 361 l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 398 (399)
T PRK05122 361 VASWFGYPSIFLAAALAALLGLALTWLL-YRRAPRAVPE 398 (399)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHh-cccccccCCC
Confidence 7776555556666666666666555554 5666666665
No 33
>PRK03545 putative arabinose transporter; Provisional
Probab=99.71 E-value=7.5e-15 Score=139.25 Aligned_cols=269 Identities=13% Similarity=0.061 Sum_probs=154.1
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpE 83 (369)
.|++.+ +...+++.|+.|+++||++.++.+.+..+|..++..+...+.+..+||..|.+.++..++..+ .++.+||
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 355543 445578999999999999999999999999998887776666668999999998877666543 3445676
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
.|+ .+. +. .+...+.++++
T Consensus 187 ~~~-----~~~-~~-------------------------------------------------------~~~~~~~~~~~ 205 (390)
T PRK03545 187 LPS-----EHS-GS-------------------------------------------------------LKSLPLLFRRP 205 (390)
T ss_pred CCC-----CCc-ch-------------------------------------------------------HHHHHHHHhCc
Confidence 542 000 00 00112223322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLI-SELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
..+...... +.....+++...+. +.+.+. .+.+.........+.++..+++.++.+.+.||+|||
T Consensus 206 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~-----------~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 206 ALVSLYLLT---VVVVTAHFTAYSYIEPFVQQV-----------AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHh-----------cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 222111111 11112222222222 222110 011111112223445667888999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
.+...................+......+..+..+...+..........|..| +.|+++.|+.+....++..++|.+.+
T Consensus 272 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 272 FLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76554333322222222222222222222222222222222334456667777 58899999999998999999999999
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 017592 323 ALVANCHQMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
.+.+..+....+...+.+.+++.+..++..
T Consensus 351 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 351 QVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 888877665566666666666666655543
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.70 E-value=2.1e-14 Score=134.99 Aligned_cols=262 Identities=13% Similarity=0.088 Sum_probs=144.0
Q ss_pred chhhHhHhhhcCCCcchhH--HHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH-HhhccCChhhHhh
Q 017592 14 HVFLSWFLEFVPPSNRGMW--MVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQPESPRYLCL 90 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~--~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESP~~l~~ 90 (369)
|...++..|+.|++.|++. .+....+..+|..++..+...+.+..+||.+|.+.+++.++..+. ++.+||+|++...
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPG 185 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccc
Confidence 4455677899998888743 466677778888887777666666689999999988876665544 4568998743100
Q ss_pred cCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHH
Q 017592 91 KGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTIL 170 (369)
Q Consensus 91 ~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 170 (369)
+. + + . +....++++..+...+
T Consensus 186 ~~--------------------~--------~----~---------------------------~~~~~~~~~~~~~~~~ 206 (375)
T TIGR00899 186 AL--------------------T--------R----L---------------------------EVRGLLASRDTRLLFV 206 (375)
T ss_pred cc--------------------C--------c----c---------------------------hhhhhhcCcchHHHHH
Confidence 00 0 0 0 0000111111121111
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHH
Q 017592 171 L-WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMF 249 (369)
Q Consensus 171 ~-~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~ 249 (369)
. ...+..... ...+.|.+... ..+.+....-....+......++.++.+.+.||+|||+.+..+.
T Consensus 207 ~~~~~~~~~~~----~~~~~~~~~~~----------~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 207 ACTLMWGCNIL----YIINMPLLIIH----------ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred HHHHHHHHHHH----HHhhhHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH
Confidence 1 112221111 11111211100 00111111111122333445667788999999999999887765
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 017592 250 TLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 329 (369)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~ 329 (369)
.++.+.........+.+..........++.....+....+..|.+|.+ |+++.|+.+...+++..++|.+.+.+.+..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 273 LAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 544443332222222222222222222222233455667888999876 4599999999999999999999888777655
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 017592 330 QMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 330 ~~~~~~~~~~~~~i~~~~~~ 349 (369)
....+.+.+++.+++.+...
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 352 YHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred chhHHHHHHHHHHHHHHHHh
Confidence 54556666666666555443
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.69 E-value=1.3e-14 Score=140.81 Aligned_cols=289 Identities=15% Similarity=0.173 Sum_probs=158.1
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhhHhhhhHHHHHHHHHH-hhcc
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFL-GFQP 82 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-~~WR~~~~~~~ip~~i~~~~~-~~lp 82 (369)
.|++.+ +....++.|+.|+++||++.++...+..+|.+++..+...+... .+||.+|.+.+++.++..++. ...|
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 455554 56667899999999999999999999999999988877666666 499999999988877765544 4567
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+|+... +.++.++ +.+++... +.+ .. ++.+ ..+++.++.
T Consensus 221 ~~p~~~~---~~~~~~~--~~i~~~~~-----------------~~~-------------~~--~~~~---~~~~~~~~~ 260 (465)
T TIGR00894 221 DDPSIHP---CISKFEK--KYINSSLQ-----------------GQK-------------GS--TRQS---LPIKAIPKS 260 (465)
T ss_pred CCcccCC---CCCHHHH--HHHHhhcc-----------------ccc-------------CC--CCCC---CCHHHHhcC
Confidence 8886321 1111111 11110000 000 00 0000 123444433
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+ +.....+..++....+|....|.|.+.+.. .+.+....-....+..++.+++.+++++++||++||
T Consensus 261 ~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~----------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 261 L---PVWAIWFAIFGHFWLYTILPTYLPTFISWV----------LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 222333334445555566666666544211 011111111222344566788889999999998755
Q ss_pred HHH------HHHHHHH----HHHHHHHhh-ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHH
Q 017592 243 LSI------TIMFTLS----CLFLLPLVT-YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 243 ~~~------~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
+.. .....++ +++.+.... ..+......++.+..++..+.....+....|..|. .++++.|+.+..+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~ 406 (465)
T TIGR00894 328 KTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGF 406 (465)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHH
Confidence 321 0111111 111111111 11112222222222222222233445566677765 89999999999999
Q ss_pred HHHHHHHHHHHHHHhhc--h-hhHHHHHHHHHHHHHHHHHHh
Q 017592 312 IGGMVCPLVAVALVANC--H-QMTAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 312 i~~~~~p~~~~~l~~~~--~-~~~~~~~~~~~~~i~~~~~~~ 350 (369)
++++++|.+.+.+.+.. + ....+.+.++..+++.++..+
T Consensus 407 l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 407 IGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 99999999888766532 2 233455556666665554443
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.68 E-value=5.2e-15 Score=138.77 Aligned_cols=269 Identities=14% Similarity=0.105 Sum_probs=149.7
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH-Hhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lp 82 (369)
+.|+|.+ +....++.|+.| ++||++.+....+..+|.+++..+.....+..+||..|.+.+++.++..+. .+.++
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 4455554 234456788887 569999999999999998776555444455679999999888777665544 34455
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|.|+- +. +++ .+.++ +. ....+.+++
T Consensus 179 ~~~~~--------~~-----------~~~-----------~~~~~--------------------~~----~~~~~~~~~ 204 (377)
T TIGR00890 179 YPPGQ--------LI-----------KTN-----------IEVSV--------------------KD----YTVWEMLRT 204 (377)
T ss_pred cCchh--------cc-----------ccC-----------cccch--------------------hh----hhHHHHHcC
Confidence 44310 00 000 00000 00 012233333
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+..... ....+.....++....+.+.+.+. .+.++........+..+..+++.++.++++||+|||
T Consensus 205 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 270 (377)
T TIGR00890 205 PQFWVL---YLSFFLNAVSGLLLIGLYKPYGQS-----------LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ 270 (377)
T ss_pred ccHHHH---HHHHHHHhHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 222111 111121112111111111111110 011111112233455667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-h-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQS-N-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.+..+..+..+..+....... . ...........+.....++....+.+|.+|++.|+++.|+.+....+++.++|.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 350 (377)
T TIGR00890 271 KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLI 350 (377)
T ss_pred hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 9887766655544433332221 1 1111111222222223344556788999999999999999999999999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHH
Q 017592 321 AVALVANCHQMTAVVLLVVVIVTS 344 (369)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~i~ 344 (369)
.+.+.+..+....+.+.+++.+++
T Consensus 351 ~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 351 ASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhhhchhhHHHHHHHHHHHh
Confidence 888777665544555555544443
No 37
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.67 E-value=1.2e-14 Score=141.34 Aligned_cols=280 Identities=15% Similarity=0.057 Sum_probs=140.1
Q ss_pred eeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH----HHhc-----cCCCchhhHhhhhHHHHHHHH
Q 017592 8 WERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA----WIIM-----PRLDWRWLLGLSSIPSFILLA 76 (369)
Q Consensus 8 ~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~----~~~~-----~~~~WR~~~~~~~ip~~i~~~ 76 (369)
.|+|.+ .....+++|+.|+++||.+.++......+|..++..+. ..+. +..+||..|.+.+++.++..+
T Consensus 134 ~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 134 IGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 455554 22334689999999999999988766666665543332 1111 125899999998887776655
Q ss_pred HHhhccC-ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhH
Q 017592 77 FLGFQPE-SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSL 155 (369)
Q Consensus 77 ~~~~lpE-SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (369)
..+++++ .|+ ++.++.+ + +. +. ++.+....
T Consensus 214 ~~~~~~~~~p~-----~~~~~~~-------~-~~----------------~~--------------------~~~~~~~~ 244 (476)
T PLN00028 214 LVLTLGQDLPD-----GNYRELK-------K-SG----------------TM--------------------PKDSFSKV 244 (476)
T ss_pred HHHHHcCcCCC-----CchhhHH-------h-cC----------------cc--------------------ccccHHHH
Confidence 5444443 331 1111100 0 00 00 00000012
Q ss_pred HHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHH
Q 017592 156 FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAIL 235 (369)
Q Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l 235 (369)
+++.++. +++.+.++.++.....+++...+.|.+.... .+.+.........+.+++.+++.++.+++
T Consensus 245 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~a~~~~~~~~~~~~ig~~~~G~l 311 (476)
T PLN00028 245 LRYGVTN---YRTWILALTYGYSFGVELTMDNIIAEYFYDR----------FGLSLETAGAIAASFGLMNLFARPAGGYL 311 (476)
T ss_pred HHHHHcC---chhHHHHHHHHHHHHHHHHHHhHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 2222221 1222333333333333333333444332110 01111111223345567788899999999
Q ss_pred HhhhchhH-------HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHH
Q 017592 236 VDTAGRKL-------SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 308 (369)
Q Consensus 236 ~dr~GRR~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~ 308 (369)
+||+|||+ .......+.++..+.+....+.........+..++.....+..+.+.+|+.| +.|+++.|+.+.
T Consensus 312 sDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~ 390 (476)
T PLN00028 312 SDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGA 390 (476)
T ss_pred HHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhc
Confidence 99998762 2222222222222222222222222222222222222334556777888765 789999999988
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhc
Q 017592 309 MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 309 ~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
.+.++++++|++.. ..+..+....+++.+++.++++++.++.
T Consensus 391 ~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 391 GGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred cccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 88888888887653 1112223345666666666666555443
No 38
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.67 E-value=2.4e-14 Score=132.78 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=163.7
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|++.+ +...+++.|+.|+|+|++..+..+....+|..++..++..+.+..+||..+.+.+++.++..+...++|
T Consensus 96 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (352)
T cd06174 96 LLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL- 174 (352)
T ss_pred HHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 3455554 566678999999999999999999999999999888877776777899999998888777666555444
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
+ +
T Consensus 175 ---------------~---~------------------------------------------------------------ 176 (352)
T cd06174 175 ---------------R---L------------------------------------------------------------ 176 (352)
T ss_pred ---------------H---H------------------------------------------------------------
Confidence 0 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
........+.....+.....+.+.+... ..+.+............+...++.++.+.+.||+|||+
T Consensus 177 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 177 ----LLLLALAFFLLSFGYYGLLTYLPLYLQE----------VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred ----HHHHHHHHHHHHhHHHHHHHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0001111111111122222222222210 00111122223345666778889999999999999999
Q ss_pred -HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 244 -SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
.+..+..+..+..+......+............++....++....+..|.+|.+.|++..|+.+....+++.++|.+.+
T Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 243 LLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777666555554443333322222222333333334455678899999999999999999999999999999999988
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHH
Q 017592 323 ALVANCHQMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~i~~~~~~ 349 (369)
.+.+..+....+.+.+++.+++.+..+
T Consensus 323 ~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 323 LLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 887665555667777777776655543
No 39
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.66 E-value=2.1e-14 Score=134.44 Aligned_cols=232 Identities=12% Similarity=0.087 Sum_probs=134.7
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCC--------chhhHhhhhHHHHHHHHHHhh-ccCC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD--------WRWLLGLSSIPSFILLAFLGF-QPES 84 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~--------WR~~~~~~~ip~~i~~~~~~~-lpES 84 (369)
++..+++.|++|+|+|+++.+....++.+|.++++.++..+.+..+ ||.+|.+.++..++..+..++ .||+
T Consensus 102 ~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 102 IALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4556789999999999999999999999999998888766655556 999999999887776665543 5774
Q ss_pred hhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchh
Q 017592 85 PRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKL 164 (369)
Q Consensus 85 P~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (369)
++. +.+.++..+ +....++++++++.
T Consensus 182 ~~~---~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~~ 207 (356)
T TIGR00901 182 QED---ASVPKPLTQ---------------------------------------------------AVLKPIREFFQRKN 207 (356)
T ss_pred Ccc---cccchhHHH---------------------------------------------------HHHHHHHHHHHhcC
Confidence 321 000000000 00012333444333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhh-HHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL-YIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
.++.....+..+.....++....+.+.+... .+.+.... ........+..+++.++.++++||+|||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 276 (356)
T TIGR00901 208 MIQALLLLLLIVLYKLGDSAATVLTTLFLLD-----------MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY 276 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 2233333333333344455544444433211 01111111 11112223456788999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhh---cc-------ch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVT---YQ-------SN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG 310 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~---~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~ 310 (369)
.+..+.++.++....... .. +. +....+.+...++....++....+..|.+|++.|++..|+.+...
T Consensus 277 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 277 ALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 877666554443322211 11 11 111122222233334456678999999999999999999987764
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.66 E-value=4.3e-14 Score=134.26 Aligned_cols=267 Identities=10% Similarity=0.090 Sum_probs=141.7
Q ss_pred chhhHhHhhhcCCCcc--hhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccCChhhHhh
Q 017592 14 HVFLSWFLEFVPPSNR--GMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPESPRYLCL 90 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~R--g~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESP~~l~~ 90 (369)
|...++..|+.|++.| +.+.+..+...++|.+++..++..+.+..|||..|.+.++..++.. +.+.++||+|+=
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--- 200 (393)
T PRK15011 124 PQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE--- 200 (393)
T ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC---
Confidence 4444567788777766 4456788888889999888887776666899999988877665554 445567886420
Q ss_pred cCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHH
Q 017592 91 KGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTIL 170 (369)
Q Consensus 91 ~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 170 (369)
++ +. +. +.+. .++ + +++.+....+
T Consensus 201 ~~---~~---------------~~---------~~~~--------------------~~~----~-----~~~~~~~~~~ 224 (393)
T PRK15011 201 LP---LA---------------TG---------TLEA--------------------PRR----N-----RRDTLLLFVI 224 (393)
T ss_pred Cc---cc---------------cc---------cccc--------------------ccc----c-----cccHHHHHHH
Confidence 00 00 00 0000 000 0 0111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHH
Q 017592 171 LWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFT 250 (369)
Q Consensus 171 ~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~ 250 (369)
....+. .++....+.|.+.+. ..+.+....-.......+..+++.++.+.++||+|||+.+..+..
T Consensus 225 ~~~~~~----~~~~~~~~~p~~l~~----------~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~ 290 (393)
T PRK15011 225 CTLMWG----TNSLYIINMPLFIIN----------ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAV 290 (393)
T ss_pred HHHHHH----HHHHHHHHHHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 111111 122222233322210 001111111111223344567788899999999999998766544
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 017592 251 LSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 330 (369)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~ 330 (369)
...+.........+........+...++.....+....+..|.+|.+ |+++.++.+....+++.++|.+.+.+.+..+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~ 369 (393)
T PRK15011 291 AGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY 369 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 43333222222222221111111111111122234456778999975 99999999888889999999998887776554
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 331 MTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 331 ~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
...+.+.+++.+++.+..+ ..|||
T Consensus 370 ~~~~~~~~~~~~~~~~~~~-~~~~~ 393 (393)
T PRK15011 370 HAVFWFALVMIIATLFCLL-RIKDV 393 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhcCC
Confidence 4445544555555544444 44664
No 41
>PRK12382 putative transporter; Provisional
Probab=99.66 E-value=4.7e-14 Score=133.82 Aligned_cols=265 Identities=15% Similarity=0.037 Sum_probs=151.1
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|+|.+ +...+++.|+.|+++|+++.+..+.+...|..++..++..+....+||..+.+..+..++........||
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 200 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRK 200 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccC
Confidence 3466654 3344678899999999999999999999898888877766666789998877665544443333333443
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
.|. + + + + + . +.++..+ .
T Consensus 201 ~~~------~--~--------------~---------------~-~------------------~------~~~~~~~-~ 217 (392)
T PRK12382 201 VPA------H--A--------------G---------------E-R------------------P------SLWSVVG-L 217 (392)
T ss_pred CCC------C--c--------------c---------------c-C------------------c------hHHHHHH-H
Confidence 221 0 0 0 0 0 0 0000000 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
.++..+.... ....+.....+.+.+.... +.... .......++..+++.++.+.+.||+|||+
T Consensus 218 ~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 280 (392)
T PRK12382 218 IWKPGLGLAL----QGVGFAVIGTFVSLYFASK-----------GWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVK 280 (392)
T ss_pred HHHhHHHHHH----HHHHHhHHHHHHHHHHHhc-----------CCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1111111111 1111222222222221100 01111 12223445566778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
.+..+..+.++..+......+.........+..+......+.......|.+|++.|+++.|+.+....+++.++|.....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 360 (392)
T PRK12382 281 VAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGM 360 (392)
T ss_pred ehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776554444333333322222222222222222222334455677899999999999999999999999999999888
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHhc
Q 017592 324 LVANCHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
+.+..+....+...+.+.+++.+..++.
T Consensus 361 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 361 LATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 8877665556666676666666555443
No 42
>PRK03699 putative transporter; Provisional
Probab=99.66 E-value=2.6e-14 Score=135.81 Aligned_cols=269 Identities=13% Similarity=0.145 Sum_probs=151.5
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHH-hccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI-IMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~-~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
.|++.+ +...+++.|+.|+++||...+..+..+.+|..+++.+... +....+||.+|.+.+++.++..+..++ .+
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~ 183 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SE 183 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 355443 4456788999999999999988888888887776655433 334579999999887776665443322 22
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
.|+- +.+ + + ++.+ + .. ++.
T Consensus 184 ~p~~---~~~-----------------~----------~---~~~~----------------~-~~-----------~~~ 202 (394)
T PRK03699 184 FPAL---GKH-----------------A----------P---KADK----------------P-VA-----------KEK 202 (394)
T ss_pred Cccc---ccc-----------------C----------c---cccC----------------c-cc-----------ccc
Confidence 2210 000 0 0 0000 0 00 001
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
..++.....+.++.....+++...|.|.+.+... ........ .......+...+|.++.+.++||+|||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--------g~s~~~~~--~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 203 WGIGVLFLAIAALLYILAQLTFISWVPEYAQKKF--------GMSLEDAG--NLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCChHHhh--HHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 1122222333333334445566666665442110 00111111 1122334567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
.+.....++++.........+........+...++..+.++....+..|..|.+ +++..|.....+.+++.++|.+..+
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~ 351 (394)
T PRK03699 273 ILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSP 351 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 887766554444333332222222222222233333344555666777877744 6778888888889999999999988
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHH
Q 017592 324 LVANCHQMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i~~~~~~ 349 (369)
+.+..+....++..+++.+++.+...
T Consensus 352 l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 352 IVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 87766655555555555555544433
No 43
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.66 E-value=6.3e-14 Score=133.08 Aligned_cols=277 Identities=12% Similarity=0.044 Sum_probs=157.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhhHhhhhHHHHHHHHHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-~~WR~~~~~~~ip~~i~~~~~~~lp 82 (369)
+.|+|.+ +....++.|+.| ++|+++.+....+...|..++..+.-.+.++ .+||..+.+.+++.++..+.++...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4466665 344567788887 7799999999988888888877665554444 4899987766655544433322111
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
+++.++ + + ++.. . . .+.+++
T Consensus 185 --------~~~~~~--------------~----------~---~~~~------------------~------~-~~~l~~ 204 (393)
T PRK09705 185 --------AREVAS--------------S----------H---KTTT------------------T------P-VRVVFT 204 (393)
T ss_pred --------cCCCcc--------------c----------c---CCCc------------------C------C-cccccC
Confidence 110000 0 0 0000 0 0 000111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
++.....+..+.....+++...+.|.+.... +.+....-....+..+..++|.++.+.+.||+|||
T Consensus 205 ---~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~-----------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 205 ---PRAWTLGVYFGLINGGYASLIAWLPAFYIEI-----------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 1122222223334455666666666543211 11111111223455677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hccchhHHHHHHHHHHHHHhhhhHHHHHhhcccc-cccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLV-TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY-PTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.+..+..+.++...... ...+... .......+.....++.......+.+ |++.|++..|+.+.++.+++.++|.+
T Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~ 348 (393)
T PRK09705 271 KLLMLALVLQLVGFCGFIWLPLQLPV--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWF 348 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHH--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988776554443332222 2221111 1111122222233344555555666 46889999999999999999999999
Q ss_pred HHHHHhhchh-hHHHHHHHHHHHHHHHHHHhccCcCCCCCC
Q 017592 321 AVALVANCHQ-MTAVVLLVVVIVTSILSVMLIPFETKGQEL 360 (369)
Q Consensus 321 ~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~pETkg~~l 360 (369)
..++.+..+. ...+.+.++++++..+..+.++|||++|-.
T Consensus 349 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 349 SGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 9988887653 334455555556666666778899988754
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.65 E-value=3.8e-14 Score=132.38 Aligned_cols=255 Identities=13% Similarity=0.036 Sum_probs=148.6
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhh--cc
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGF--QP 82 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~--lp 82 (369)
.|++.+ +...+++.|+.|+++|++..+..+....+|.+++..++..+.+..+||..+.+.+++.++..+..+. .|
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIP 181 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 355554 5566789999999999999999999999999998888777666789999998887776665444332 33
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|.++- .+. + .++ + . .++....++.++++
T Consensus 182 ~~~~~----~~~-~----------------------------~~~-----~---~-----------~~~~~~~~~~~~~~ 209 (365)
T TIGR00900 182 ELAAS----EIQ-A----------------------------LSN-----A---V-----------LRDTREGIKFVLKN 209 (365)
T ss_pred cCCCc----ccc-c----------------------------cch-----h---H-----------HHHHHhHHHHHHcC
Confidence 32210 000 0 000 0 0 00001123334443
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-HHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVV-LLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR 241 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GR 241 (369)
+..+...+.... ....+++.. .+.|.+... ..+.+....-......+++.+++.++.+.+.||.||
T Consensus 210 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (365)
T TIGR00900 210 PLLRTLLLLALL---FNLVFAPAIVALFPYVQSK----------YLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKR 276 (365)
T ss_pred cHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHH----------HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 333222222211 111222221 222322210 001111111222344566778888899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITIMFTLSCLFLLPLVTYQS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 242 R~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
|+.+..+..+.++.........+ .+...+..+...++..........+..|.+|++.|+++.|+.+....+++.++|.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 277 MALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887765554444433333222 22222222222233333445678899999999999999999999999999999988
Q ss_pred HHHHHhh
Q 017592 321 AVALVAN 327 (369)
Q Consensus 321 ~~~l~~~ 327 (369)
.+.+.+.
T Consensus 357 ~g~l~~~ 363 (365)
T TIGR00900 357 AGPLADH 363 (365)
T ss_pred HHHHHHH
Confidence 8877664
No 45
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.62 E-value=1.1e-12 Score=124.94 Aligned_cols=267 Identities=14% Similarity=0.050 Sum_probs=141.8
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhhHhhhhHHHHHHHHHHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-~~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g 92 (369)
++..+++.|+.|+++|+++.++...++.+|.++++.+...+.+. .+||.+|.+.++..++..+..+++||+++.. +
T Consensus 113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~ 189 (402)
T PRK11902 113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---R 189 (402)
T ss_pred HHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---c
Confidence 55567899999999999999999999999999988777666554 5999999988776666666566788875421 0
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLW 172 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 172 (369)
+.++..+ +....++++++++..+..++..
T Consensus 190 ~~~~~~~---------------------------------------------------~~~~~~~~l~~~~~~~~~l~~~ 218 (402)
T PRK11902 190 PPRSLGE---------------------------------------------------AVVGPLRDFFSRRGAWALLLLI 218 (402)
T ss_pred ccchhHH---------------------------------------------------HHHHHHHHHHhCcCHHHHHHHH
Confidence 0000000 0011344455544443333322
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHH-HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHH
Q 017592 173 LLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDE-FITSLAEIPGLLLAAILVDTAGRKLSITIMFTL 251 (369)
Q Consensus 173 ~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~ 251 (369)
.........++.. ..+.+.. ..+.+....-... .......+++.++.+.+.||+|||+.+..+..+
T Consensus 219 ~l~~~~~~~~~~~--~~~~l~~-----------~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~ 285 (402)
T PRK11902 219 VLYKLGDAFAGSL--STTFLIR-----------GAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVL 285 (402)
T ss_pred HHHHhHHHHHHHH--HHHHHHH-----------hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2222111111111 1121111 0011111111111 122335778899999999999999987655444
Q ss_pred HHHHHHHH---hhc-cchhHHHHHHH----HHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 252 SCLFLLPL---VTY-QSNILTTGLLF----GARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 252 ~~~~~~~~---~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
..+..+.. ... .+.+....... ...+.....+.....+..+.+|.+.++. ......++...++.+.+.
T Consensus 286 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~G~ 361 (402)
T PRK11902 286 QAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVGRVYVGPTSGY 361 (402)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 33322211 222 22222222211 1112222334556677888888766544 333333444333445666
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHhc
Q 017592 324 LVANCHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
+.+..+....+...+++++++.++.+..
T Consensus 362 l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 362 LVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6676665555666666666665555444
No 46
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.61 E-value=5.7e-14 Score=131.77 Aligned_cols=273 Identities=16% Similarity=0.181 Sum_probs=143.9
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHH-HHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEA-IGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQ 81 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~-~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~l 81 (369)
+.|++.+ +...+++.|+.|+++|++..++.+.+..+|.+++. .+...+....+||..+.+.++..++. ++..+.+
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 92 LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheee
Confidence 3455443 66678999999999999999999999999998887 45555556689999998877655543 4555678
Q ss_pred cCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhc
Q 017592 82 PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS 161 (369)
Q Consensus 82 pESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (369)
||+|+.. ++.++ ++.+ +.+.++.+ ..+ + ++.+......+.+++
T Consensus 172 ~~~~~~~---~~~~~-------------~~~~--------~~~~~~~~-------~~~---~---~~~~~~~~~~~~~~~ 214 (379)
T TIGR00881 172 RDSPQSC---GLPPA-------------EEMP--------NEEPDGDA-------EKK---E---EELTKKQIFLQYVLL 214 (379)
T ss_pred CCCcccc---ccCcc-------------ccCc--------cccccccc-------ccc---c---ccccchHHHHHHHHh
Confidence 8877531 10000 0000 00000000 000 0 000000112233333
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhc-
Q 017592 162 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAG- 240 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~G- 240 (369)
++.. ....+..+......++...+.|.+.... .+.+.........+..+..+++.++.++++||.+
T Consensus 215 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~ 281 (379)
T TIGR00881 215 NKVL---WYISLGYVFVYVVRTGILDWSPLYLTQE----------KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFN 281 (379)
T ss_pred cchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcC
Confidence 3221 1112222222222233333333322110 0111111122334556677889999999999863
Q ss_pred hhHHHH-HHHHHHHHHHHHHhhc--cch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHH
Q 017592 241 RKLSIT-IMFTLSCLFLLPLVTY--QSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMV 316 (369)
Q Consensus 241 RR~~~~-~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~ 316 (369)
||+... ................ ... .....+.+...++..+.....+.+..|.+|++.|+++.|+.+.++.+++.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 361 (379)
T TIGR00881 282 GRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGIL 361 (379)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhh
Confidence 333222 2221111111111111 111 111122222222233344556778999999999999999999999999999
Q ss_pred HHHHHHHHHhhch
Q 017592 317 CPLVAVALVANCH 329 (369)
Q Consensus 317 ~p~~~~~l~~~~~ 329 (369)
+|.+.+.+.+..+
T Consensus 362 ~~~~~g~l~~~~g 374 (379)
T TIGR00881 362 AGLPLGYLADGFG 374 (379)
T ss_pred hhhhHHHHHHhhc
Confidence 9999888877654
No 47
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=8.5e-13 Score=122.05 Aligned_cols=263 Identities=17% Similarity=0.156 Sum_probs=160.0
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESP~~l~~~g 92 (369)
++..++..+.+||++|+++.++...+.++..+++..++.++.+.+|||..|.+-+..+++.+ ..+..+| |+=
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~----- 192 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE----- 192 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-----
Confidence 45556789999999999999999999999999999999888888999999988887777665 4556677 210
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLW 172 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 172 (369)
+ +++ +. .........++++.....++..
T Consensus 193 ~-~~~---------------~~------------------------------------~~~~~~~~~l~~p~v~~~l~~t 220 (394)
T COG2814 193 I-SGS---------------LP------------------------------------GPLRTLLRLLRRPGVLLGLLAT 220 (394)
T ss_pred C-CCC---------------CC------------------------------------cchhHHHHHhcCchHHHHHHHH
Confidence 0 000 00 0001123344443333333444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHH
Q 017592 173 LLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLS 252 (369)
Q Consensus 173 ~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~ 252 (369)
.+++...+.-|. +..|.+.+. .+.+....-+..+..+++.++|+++.|.+.|| +.|+.+.....+.
T Consensus 221 ~l~~~g~F~~ft--Yi~P~L~~v-----------~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 221 FLFMTGHFALYT--YIRPFLESV-----------AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred HHHHcchhhhHH--hHHHHHHHc-----------cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHH
Confidence 444433332222 223433311 11122233455677789999999999999999 7777776654444
Q ss_pred HHHHHHHhh-ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 017592 253 CLFLLPLVT-YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM 331 (369)
Q Consensus 253 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~ 331 (369)
.+..+.+.+ ..+........+...+.............++ .-++.+..+.++....-+++...+..+...+.++.+..
T Consensus 287 a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~ 365 (394)
T COG2814 287 ALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYA 365 (394)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 433333333 2333333233332222111112223445555 55789999999999999999999999988888876554
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 017592 332 TAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 332 ~~~~~~~~~~~i~~~~~~~ 350 (369)
...+.-+...+++.++...
T Consensus 366 ~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 366 ATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555443
No 48
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.58 E-value=2.8e-12 Score=122.19 Aligned_cols=273 Identities=12% Similarity=0.053 Sum_probs=143.9
Q ss_pred eccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHH-HHHHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhccC
Q 017592 9 ERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGS-VSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPE 83 (369)
Q Consensus 9 G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~-l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpE 83 (369)
|+|.+ +...+++.|..|+++||++.++.+....+|. +++..++..+.+..+|+..++......++. .+..+.+++
T Consensus 116 G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 116 GLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCC
Confidence 55543 3445678899999999999999999999986 466665545555677554433322221111 122222332
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
.|+ .++. + ++.+ .++..+.++.+++++
T Consensus 196 ~~~-------~~~~------------------------~---~~~~-------------------~~~~~~~~~~~~~~~ 222 (402)
T TIGR00897 196 IFT-------PQHM------------------------Q---TREK-------------------FSELGKAATILFTNP 222 (402)
T ss_pred CCC-------cccc------------------------c---CCcc-------------------hhhHHHHHHHHHcCh
Confidence 110 0000 0 0000 000001233344332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
. .....+..+.+...+++...+.|.+.+.. +.+.........+..++..++.++.+.++||+|||+
T Consensus 223 ~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 223 N---VLLGGMVRIINTIGLFGFAVFLPMFVAEL-----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 2 22222333344455666666666543211 111111112223445678889999999999999988
Q ss_pred HHH-HHHHHHHHHHHHHh---h--ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHH
Q 017592 244 SIT-IMFTLSCLFLLPLV---T--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVC 317 (369)
Q Consensus 244 ~~~-~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~ 317 (369)
.+. .+.+...+....+. . ..+............++..+ .........|..| +.|+++.|+.+....++++++
T Consensus 289 ~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~g 366 (402)
T TIGR00897 289 TVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG-YVPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLA 366 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHH
Confidence 653 22222222111111 1 11111111222222222222 2223345678766 589999999999999999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHh
Q 017592 318 PLVAVALVANCHQMTAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 318 p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 350 (369)
|.+...+.+..+....+.+.+++.+++.+...+
T Consensus 367 p~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 367 PAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999988888766556667777666666655544
No 49
>PRK10504 putative transporter; Provisional
Probab=99.57 E-value=4.4e-12 Score=123.31 Aligned_cols=296 Identities=12% Similarity=0.039 Sum_probs=145.4
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|+|.+ +...+++.|+.|+++|+...++......+|..++..+...+....+||+.|.+......+..+ .....|
T Consensus 107 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 107 LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4466664 455678899999999999999999999999988877776666678999999887655444433 334456
Q ss_pred CChhhHhhcCChHHHHHHHHHHH------HHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHH
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIA------QVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 156 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (369)
+++. .+.|.+.+...+.-.. ..++.+..............-... .-.....++. . .++. ..+.
T Consensus 187 ~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~---~~~~ 255 (471)
T PRK10504 187 NYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVV--ALLLYLLHAR-N--NNRA---LFSL 255 (471)
T ss_pred Cccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHH--HHHHHHHHHh-c--CCCC---ccCH
Confidence 5441 2223333221111000 000000000000000000000000 0000000000 0 0000 0011
Q ss_pred HHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHH
Q 017592 157 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 236 (369)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~ 236 (369)
.+++++..+..+...+. ..+.+.....+.|.+.+.. .+.+............+..+++..+.+.+.
T Consensus 256 -~l~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~----------~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 321 (471)
T PRK10504 256 -KLFRTRTFSLGLAGSFA---GRIGSGMLPFMTPVFLQIG----------LGFSPFHAGLMMIPMVLGSMGMKRIVVQVV 321 (471)
T ss_pred -HHhcccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHH----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23443333322222211 1111111122222222100 011111111222334455566667899999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHhh-ccchh-H-HHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLVT-YQSNI-L-TTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIG 313 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~ 313 (369)
||+|||+++..+..+.++....+.. ..... . .....+...+.....++.......+.+|.+.|+++.|+.+....++
T Consensus 322 ~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 401 (471)
T PRK10504 322 NRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLS 401 (471)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHH
Confidence 9999999988766644444333332 11111 1 1111111112222334556778889999999999999999888899
Q ss_pred HHHHHHHHHHHHhh
Q 017592 314 GMVCPLVAVALVAN 327 (369)
Q Consensus 314 ~~~~p~~~~~l~~~ 327 (369)
..+++.+...+++.
T Consensus 402 ~~ig~~i~g~ll~~ 415 (471)
T PRK10504 402 MSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998887766554
No 50
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.56 E-value=4e-12 Score=120.63 Aligned_cols=78 Identities=15% Similarity=0.163 Sum_probs=59.2
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpE 83 (369)
.|++.+ +...+++.|..|+++|++..+..+....+|.+++..++..+....+||..+.+.++..++.. +..+.+||
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 455554 45567889999999999999999998888888877777666566899999988876655544 34556787
Q ss_pred Ch
Q 017592 84 SP 85 (369)
Q Consensus 84 SP 85 (369)
++
T Consensus 181 ~~ 182 (392)
T PRK10473 181 TR 182 (392)
T ss_pred CC
Confidence 63
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=1.1e-12 Score=125.02 Aligned_cols=275 Identities=12% Similarity=0.072 Sum_probs=150.9
Q ss_pred eeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhccCC
Q 017592 8 WERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQPES 84 (369)
Q Consensus 8 ~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpES 84 (369)
.|++++ +....++.|..|+++||+..+.......+|.+++..+...+.+..+||..+.+.++..++..+ ..+.+||.
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 117 LGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 355443 445567889999999999999999999999888877776666668999999888776655443 34456664
Q ss_pred hhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhc-ch
Q 017592 85 PRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS-SK 163 (369)
Q Consensus 85 P~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 163 (369)
++-. + + ++..+ . .+....++ ++
T Consensus 197 ~~~~--~-~-~~~~~----~-------------------------------------------------~~~~~~~~~~~ 219 (408)
T PRK09874 197 FQPV--S-K-KEMLH----M-------------------------------------------------REVVTSLKNPK 219 (408)
T ss_pred cccc--c-c-hhhhH----H-------------------------------------------------HHHHHhCcCCc
Confidence 3110 0 0 00000 0 00011111 22
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhH--HHHHHHHhhhhhHHHHHHHHHhhhch
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLY--IDEFITSLAEIPGLLLAAILVDTAGR 241 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~g~i~~~~l~dr~GR 241 (369)
.+.......... .........+.+.+.... .......... ....+.++..+++..+.+.+.||+||
T Consensus 220 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~ 287 (408)
T PRK09874 220 LVLSLFVTTLII---QVATGSIAPILTLYVREL---------AGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGP 287 (408)
T ss_pred hHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---------hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 222111111111 011111111111111000 0000111100 11122344556667778899999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 242 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
|+.+..+..+.++..+......+.+......+...++.....+....+..+..|.+.|++..++.+.+..++..++|.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 288 EKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred chhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHH
Confidence 99888776655444433333222222222222222222223344555667888999999999999999999999999998
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHhc
Q 017592 322 VALVANCHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
..+.+..+....+...+++.+++.+..++.
T Consensus 368 G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 368 AAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 887776665556666676666666555543
No 52
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.56 E-value=1.5e-12 Score=126.99 Aligned_cols=286 Identities=14% Similarity=0.098 Sum_probs=152.2
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lp 82 (369)
+.|+|.+ +...+++.|+.|+++||++.++......+|..++..++..+.+..+||+.|++.+.+.++.. +..+.+|
T Consensus 99 ~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 99 IQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILP 178 (485)
T ss_pred HHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcC
Confidence 4466664 55667899999999999999999999999999888777777777899999998877666554 3445678
Q ss_pred CChhhHhhcCChHHHHHHHHHHH------HHcCCCCCCccccccccCCCCCCCCCcccccc-----------cccCCCCC
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIA------QVNKTKLPNGKLVARRSTLPTGERAPPELVHL-----------LSSNGGNK 145 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 145 (369)
|.++- .+++.|.....+.... .....+ + ....+..+.... ...+ .+
T Consensus 179 ~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 241 (485)
T TIGR00711 179 RDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGP-E------------RGWFDSNEILILSITGLVAIIAFVVWE--LT 241 (485)
T ss_pred Ccccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCC-C------------CCCCCchHHHHHHHHHHHHHHHHHHHH--Hc
Confidence 76541 1222222211111000 000000 0 000000000000 0000 00
Q ss_pred ccCCCchhhHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhh
Q 017592 146 TTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAE 225 (369)
Q Consensus 146 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 225 (369)
.++ ...+. .+++++... ......+.....+++...+.|.+.... .+.+............++.
T Consensus 242 ~~~---~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~----------~g~s~~~~g~~~~~~~~~~ 304 (485)
T TIGR00711 242 DDN---PLVDL-RLFKYRNFT---IGCVYMSLLGLGLYGSFYLLPLYLQQV----------LGYTALQAGLHILPVGLAP 304 (485)
T ss_pred CCC---CccCH-HHHcCCChH---HHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHH
Confidence 000 00011 223322111 112222223333444444444332110 0111111222334556778
Q ss_pred hhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh--h-ccchhH-HHHHHHHHHHHHhhhhHHHHHhhcccccccchhh
Q 017592 226 IPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV--T-YQSNIL-TTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 301 (369)
Q Consensus 226 ~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 301 (369)
+++.++++++.||+|||+++..+..+.++...... . ...... ......+..+.....+........|.+|++.|++
T Consensus 305 ~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~ 384 (485)
T TIGR00711 305 MLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIAR 384 (485)
T ss_pred HHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhH
Confidence 88899999999999999988776655444433333 1 111111 1111222222222223344556668899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 302 GAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 302 ~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.|+.+....+++.+++.+...+.+
T Consensus 385 ~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 385 GSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998999998877766654
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.55 E-value=4.5e-12 Score=119.54 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=132.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|++.+ +...+++.|+.|+++||+..+..+....+|..+++.+...+.+..+||..+.+.++..++..+ ..+.+|
T Consensus 102 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455554 455678899999999999999999999999988877776666668999999887766555543 445577
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+++.- .+ ++.. .....+++.+++
T Consensus 182 ~~~~~~---~~-~~~~----------------------------------------------------~~~~~~~~~~~~ 205 (385)
T TIGR00710 182 ETLPYE---AR-IQIS----------------------------------------------------TYFETFLLLLKS 205 (385)
T ss_pred CCCCCc---cc-CCHH----------------------------------------------------HHHHHHHHHHcC
Confidence 754210 00 0000 000122233332
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+......+. .......++....+.|.+... ..+.+....-.......+..+++.++.+++.||+|||
T Consensus 206 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 272 (385)
T TIGR00710 206 KMFWGYALI---YGASFGGFFAFFSGAPFVYID----------IMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK 272 (385)
T ss_pred chhHHHHHH---HHHHHHHHHHHHHcChHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 221111111 111112222222222322110 0011111111223345667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh---cc-chhHH-HHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHH-HHHH
Q 017592 243 LSITIMFTLSCLFLLPLVT---YQ-SNILT-TGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI-GGMV 316 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i-~~~~ 316 (369)
+.+..+..+..+....... .. ..... ........+...........+..|.+| +.|+++.++.+.+... +++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~ 351 (385)
T TIGR00710 273 SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIV 351 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHH
Confidence 9877654433332222211 11 11111 111122222223344566778889988 5799999998888875 4445
Q ss_pred HHHH
Q 017592 317 CPLV 320 (369)
Q Consensus 317 ~p~~ 320 (369)
+|.+
T Consensus 352 ~~~~ 355 (385)
T TIGR00710 352 GYLV 355 (385)
T ss_pred HHHH
Confidence 5544
No 54
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.55 E-value=1.5e-12 Score=139.98 Aligned_cols=255 Identities=13% Similarity=-0.052 Sum_probs=139.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC---------CCchhhHhhhh-HHHHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR---------LDWRWLLGLSS-IPSFI 73 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~---------~~WR~~~~~~~-ip~~i 73 (369)
+.|++.+ ++..+++.|++|+++||++.++.+.+..+|.+++..++.++... .+|++.+.+.. ...++
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHH
Confidence 3455554 56667999999999999999999999999999888776655433 23444443333 34444
Q ss_pred HHHHHhhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchh
Q 017592 74 LLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGL 153 (369)
Q Consensus 74 ~~~~~~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (369)
.+++.+.+||+|++...+++. + ... ..+...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~------------------------------~~~------------------~~~~~~ 222 (1146)
T PRK08633 192 GLIFAYRLPKVPAAAPEVFDK-K------------------------------KYL------------------FPKLLW 222 (1146)
T ss_pred HHHHHhcCcCCCCCCcccccc-c------------------------------ccc------------------cHHHHH
Confidence 455566789987542111000 0 000 000001
Q ss_pred hHHHHhhcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCCh-hhHHHHHHHHhhhhhHHHH
Q 017592 154 SLFLMLFSSKLARTTILLW-LLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA-NLYIDEFITSLAEIPGLLL 231 (369)
Q Consensus 154 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~g~i~ 231 (369)
..+..+++++..+..++.. +.++.. +....+.|.+... ..+.+.. ..........++.+++.++
T Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~~g~s~~~~~g~~~~~~~ig~~~g~~~ 288 (1146)
T PRK08633 223 RNLKLLRSDRVLWLAIIGLSYFWFIS----QLAQANFPAYAKE----------VLGLDNTFQVQYLLAASAIGIGIGSLL 288 (1146)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHH----HHHHHhhHHHHHH----------HhCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 2344444443332222221 112211 1111122221110 0011111 1112234445667888899
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHH
Q 017592 232 AAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 232 ~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
++.+.||++||+.+.++.++.++..+.+....+.....++.++..++..........+..|..|.+.|+++.|+.+.+..
T Consensus 289 ~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~ 368 (1146)
T PRK08633 289 AGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQN 368 (1146)
T ss_pred HHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHH
Confidence 99999999998877665554444333333222222222222222222223344567888999999999999999999988
Q ss_pred HHHHHHHHHHHHH
Q 017592 312 IGGMVCPLVAVAL 324 (369)
Q Consensus 312 i~~~~~p~~~~~l 324 (369)
+++++++.+...+
T Consensus 369 lg~~~~~~~~~~l 381 (1146)
T PRK08633 369 VGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777665443
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.54 E-value=2.7e-13 Score=126.09 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=143.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH-Hhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lp 82 (369)
+.|+|.+ +...+++.|+.|+++|++..+..+....+|.+++..++..+.+..+||..+.+.++..++..++ ..++|
T Consensus 94 l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 94 LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 4466653 5666789999999999999999999999999999888877766789999999998888777553 34555
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhH-HHHhhc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSL-FLMLFS 161 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 161 (369)
|.|.--..+.+.++. + +.++. ..+ ++.+++
T Consensus 174 ~~~~~~~~~~~~~~~-------------------------------~---------------~~~~~---~~~~~~~~~~ 204 (352)
T PF07690_consen 174 EPPPPRERESPKESE-------------------------------S---------------KKPKP---LKPGFKSLFK 204 (352)
T ss_dssp --STTTT--SSTTTT------------------------------------------------HHHC---CCH-CTHHHH
T ss_pred hcccccccccccccc-------------------------------c---------------ccccc---cccccccccc
Confidence 543221100000000 0 00000 001 222232
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCC-ChhhHHHHHHHHhhhhhHHHHHHHHHhhhc
Q 017592 162 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQ-DANLYIDEFITSLAEIPGLLLAAILVDTAG 240 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~g~i~~~~l~dr~G 240 (369)
++... ......+.....++....+.|.+.... .+.+ .........+..+..+++.++.+.++||+|
T Consensus 205 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 271 (352)
T PF07690_consen 205 NPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQEV----------LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFG 271 (352)
T ss_dssp HHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCHH----------HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhh---hhhhhhhHHHHHHHHhhcccchhhhhc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22211 122222223333444444444431100 0111 111112234555666777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhh---ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHH
Q 017592 241 RKLSITIMFTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVC 317 (369)
Q Consensus 241 RR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~ 317 (369)
+|+..........+..+.+.. ..+........+...++....++....+..|.+|++.|+++.|+.+.+..+++.++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 272 RRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 877766544433333322222 11122222222223333334456788999999999999999999999999999888
Q ss_pred H
Q 017592 318 P 318 (369)
Q Consensus 318 p 318 (369)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 7
No 56
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.54 E-value=5.7e-12 Score=119.71 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=61.4
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|++.+ +...+++.|++|+|+|+++.+.....+++|.+++..++..+.+..+||..|.+.++..++..+ .+..+|
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p 196 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLP 196 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3466654 566678899999999999999999999999999888887777778999999887766555433 334567
Q ss_pred CCh
Q 017592 83 ESP 85 (369)
Q Consensus 83 ESP 85 (369)
|+|
T Consensus 197 ~~~ 199 (394)
T PRK10213 197 SLP 199 (394)
T ss_pred CCC
Confidence 754
No 57
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.53 E-value=3.3e-12 Score=121.94 Aligned_cols=268 Identities=13% Similarity=0.089 Sum_probs=146.7
Q ss_pred eeeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHH-----hcc-------------CCCchhhHhh
Q 017592 7 FWERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI-----IMP-------------RLDWRWLLGL 66 (369)
Q Consensus 7 ~~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~-----~~~-------------~~~WR~~~~~ 66 (369)
++|+|++ ++....++++.|+++||++.++.....++|..+...+.-. +.. ..+||....+
T Consensus 137 l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~ 216 (462)
T PRK15034 137 LCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWI 216 (462)
T ss_pred HHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHH
Confidence 4577654 5556688999999999999999876666666544332211 111 2347776666
Q ss_pred hhHHHHHHHHHH-hhccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCC
Q 017592 67 SSIPSFILLAFL-GFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNK 145 (369)
Q Consensus 67 ~~ip~~i~~~~~-~~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (369)
-+++.++..+.. +.+++-|. .|.
T Consensus 217 ~~~~~iv~~i~~~~~~~~~~~---~~~----------------------------------------------------- 240 (462)
T PRK15034 217 WVPLLAIATIAAWSGMNDIAS---SRA----------------------------------------------------- 240 (462)
T ss_pred HHHHHHHHHHHHHHhCCCccc---ccc-----------------------------------------------------
Confidence 555555544333 33333221 000
Q ss_pred ccCCCchhhHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhh
Q 017592 146 TTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAE 225 (369)
Q Consensus 146 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 225 (369)
..++....+|++ ++.++..+.++..-+|.+...+.|.+.... .+..+.....++..+..
T Consensus 241 ------~~~~~~~vlk~~---~~Wllslly~~tFG~fvg~s~~lp~~~~~~------------~~~~~~l~~~~l~~l~~ 299 (462)
T PRK15034 241 ------SIADQLPVLQRL---HLWLLSLLYLATFGSFIGFSAGFAMLAKTQ------------FPDVNILRLAFFGPFIG 299 (462)
T ss_pred ------CHHHHHHHhCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHH------------cChHHHHHHHHHHHHHH
Confidence 001122233322 133344444444444555555555543210 01112222234445667
Q ss_pred hhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh--hccc---hhHHHHHHHHHH-HHHhhhhHHHHHhhcccccc---
Q 017592 226 IPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV--TYQS---NILTTGLLFGAR-MCVMGAFTVSLIYAAEIYPT--- 296 (369)
Q Consensus 226 ~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~ElfPt--- 296 (369)
.++..++|+++||+|||+++.++++...++..+.. .+.. ........++.. ++....++..+-.++.+||.
T Consensus 300 ~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~ 379 (462)
T PRK15034 300 AIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITI 379 (462)
T ss_pred HHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhh
Confidence 77788999999999999999887765544433222 2211 111111122222 22223356778888899985
Q ss_pred ---c---------------chhhhHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHhc
Q 017592 297 ---S---------------VRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 297 ---~---------------vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
+ .-+...|+..+++.+|+++.|.......+..+ ....+..+.+..+++.++.+.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 380 YRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 1 23455777788888999999988776665544 3345666666666666665544
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.52 E-value=6.9e-12 Score=119.13 Aligned_cols=288 Identities=10% Similarity=-0.034 Sum_probs=151.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|+|.+ |+..+++.|+.|+++|+++.+..+....+|.+++..++..+.+ +.|+.++.+.+...++..+..+.+||
T Consensus 97 l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-~~~~~~~~i~~~~~~~~~~~~~~l~~ 175 (393)
T PRK11195 97 LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-PHAEAALAVCALIYLLAALFNLFIPR 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3466664 6667899999999999999999999999888888777655544 34888877766655555556677899
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
+|+... .+.++..+.++.. ...++.+++++
T Consensus 176 ~~~~~~--~~~~~~~~~~~~~------------------------------------------------~~~~~~l~~~~ 205 (393)
T PRK11195 176 LGARRP--GQSWNPIALLRDF------------------------------------------------FHACRVLWRDK 205 (393)
T ss_pred Cccccc--ccCCCHHHHHHHH------------------------------------------------HHHHHHHHhCc
Confidence 874311 1100000000000 01123334433
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 164 LARTTILL-WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
..+..+.. .+.++.....+|....+.+...+ .+....-......+++.++|.++.+.+.||.++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg--------------~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~ 271 (393)
T PRK11195 206 LGRFSLAGTTLFWGAGATLRFLVLAWAPVALG--------------ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL 271 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 33322222 22233333333333333343221 1111111233455567788888888999999888
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc-hhhhHHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV-RSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v-R~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
+.+..+...+ ..........+.+......++..++.............|.-|.+. |+++.++.+....++..++..+.
T Consensus 272 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 272 RVLPAGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred chHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 8776654332 222222222222211122222222211122334445557666555 79999999988888888887666
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHhcc-CcCCCCCCC
Q 017592 322 VALVANCHQMTAVVLLVVVIVTSILSVMLIP-FETKGQELS 361 (369)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~-pETkg~~l~ 361 (369)
..+ ...+....+.+.++..++++.+.+.+. .|.+.|..|
T Consensus 351 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK11195 351 SLL-VKLGVPVVAVIVGFGLLVALAMALLWRWHRRNQRQFD 390 (393)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 544 334433333433333344444443332 344444443
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.51 E-value=1e-11 Score=116.99 Aligned_cols=78 Identities=13% Similarity=0.180 Sum_probs=60.4
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpE 83 (369)
.|++.+ +...+++.|+.|+++|++..++.+....+|..++..+...+....+||..+.+.++..++.. +..+.+||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455554 45567899999999999999999999999999888777666666899999988877666554 44556777
Q ss_pred Ch
Q 017592 84 SP 85 (369)
Q Consensus 84 SP 85 (369)
++
T Consensus 169 ~~ 170 (377)
T PRK11102 169 TL 170 (377)
T ss_pred cC
Confidence 54
No 60
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.50 E-value=1.1e-11 Score=117.40 Aligned_cols=79 Identities=13% Similarity=0.095 Sum_probs=59.0
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lp 82 (369)
+.|++.+ +...+++.|+.|+++|++..+....+..+|..++..++..+....+||+.|.+.++..++.. ..++++|
T Consensus 100 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 100 VSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455543 34456788999999999999998888889888877776666666899999998887655544 3455688
Q ss_pred CCh
Q 017592 83 ESP 85 (369)
Q Consensus 83 ESP 85 (369)
|.+
T Consensus 180 ~~~ 182 (382)
T PRK10091 180 DIR 182 (382)
T ss_pred CCC
Confidence 854
No 61
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.48 E-value=5.6e-11 Score=113.32 Aligned_cols=78 Identities=10% Similarity=0.040 Sum_probs=56.6
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpE 83 (369)
.|++.+ +...+++.|..|+++|++..+.......+|.+++..+...+.+..+||..+.+.++..++..+ ..+.+||
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 355543 455678899999999998888877777777777766655555667999999887776665544 3456787
Q ss_pred Ch
Q 017592 84 SP 85 (369)
Q Consensus 84 SP 85 (369)
++
T Consensus 191 ~~ 192 (406)
T PRK15402 191 TA 192 (406)
T ss_pred CC
Confidence 65
No 62
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.47 E-value=1.4e-11 Score=118.58 Aligned_cols=244 Identities=14% Similarity=0.042 Sum_probs=134.0
Q ss_pred hhHhHhhhc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhc-------cCCCchhhHhhhhHHHHHHHH-HHhhccCChh
Q 017592 16 FLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-------PRLDWRWLLGLSSIPSFILLA-FLGFQPESPR 86 (369)
Q Consensus 16 ~~~y~~E~~-p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~-------~~~~WR~~~~~~~ip~~i~~~-~~~~lpESP~ 86 (369)
..++..|.. ++++|++..++.+.+..+|.++++.+...+. +..+||.++.+.++..++..+ ..+.+||.|+
T Consensus 120 ~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~ 199 (437)
T TIGR00792 120 YWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYS 199 (437)
T ss_pred HhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCC
Confidence 345677887 5788999999999999998877655432221 246899999888877666544 3455666431
Q ss_pred hHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhh
Q 017592 87 YLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLAR 166 (369)
Q Consensus 87 ~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 166 (369)
. +.++ ++. +.+....++.+++++..+
T Consensus 200 ~-----~~~~-----------------------------~~~--------------------~~~~~~~~~~l~~~~~~~ 225 (437)
T TIGR00792 200 E-----IPKN-----------------------------IEK--------------------KLSLKQIFKALFKNDQLL 225 (437)
T ss_pred C-----CCcc-----------------------------ccc--------------------CCCHHHHHHHHhCCHHHH
Confidence 0 0000 000 000011344444433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHH
Q 017592 167 TTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSIT 246 (369)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~ 246 (369)
...+ ..+.....++....+.+.+.+. ..+.. ........+..+..+++.++.+.++||+|||+++.
T Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 226 ILCL---AYLFYNLAFNIKNGVQVYYFTY----------VLGDP-ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHH---HHHHHHHHHHHHcchhheeEee----------ecCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 2221 1111222222222222222110 00111 11111223446777888889999999999999987
Q ss_pred HHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHhhhhHHHHHhhccccc-------ccchhhhHHHHHHHHHHHHHHHH
Q 017592 247 IMFTLSCLFLLPLVTYQSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYP-------TSVRSTGAGAANAMGRIGGMVCP 318 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-------t~vR~~~~g~~~~~~~i~~~~~p 318 (369)
.+..+.++..+......++ .....+..+..+.........+.+.+|..| .+.+++..|+.+....+++.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 7765554433333222122 222222222223333345667888888765 45678888988988899999999
Q ss_pred HHHHHHHhh
Q 017592 319 LVAVALVAN 327 (369)
Q Consensus 319 ~~~~~l~~~ 327 (369)
.+.+.+.+.
T Consensus 372 ~i~g~ll~~ 380 (437)
T TIGR00792 372 FLVGLILGI 380 (437)
T ss_pred HHHHHHHHH
Confidence 888877654
No 63
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=2.1e-12 Score=124.27 Aligned_cols=258 Identities=14% Similarity=0.171 Sum_probs=145.8
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh------ccCCCchhhHhhhhHHHHHHH-HHHhhccCChh
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII------MPRLDWRWLLGLSSIPSFILL-AFLGFQPESPR 86 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~------~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESP~ 86 (369)
|....|++-|..+++||...+++...-.+|.++++++++.+ ....|||++|++-++..++.. ++.+++|+.|.
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 67777899999999999999999999999999999998885 345799999999888777764 55678999998
Q ss_pred --hHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchh
Q 017592 87 --YLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKL 164 (369)
Q Consensus 87 --~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (369)
|+..+.+. +-+.+++++.+++. .++ + ..+..+.+.++.+.
T Consensus 233 ~~~fl~~~ek---~~~~~~~~~~~~~~-------------~~~--------------------~--~~~~~~~~a~~dp~ 274 (495)
T KOG2533|consen 233 KAWFLTDEEK---ELVVERLRESPSGG-------------IEN--------------------K--FKWKGFKEALKDPG 274 (495)
T ss_pred hccccchHHH---HHHHHHHHhccCCC-------------ccc--------------------c--cCHHHHHHHHhchh
Confidence 55432221 11122222111100 000 0 11234555554322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh----hc
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT----AG 240 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr----~G 240 (369)
+....+.+++.....|+...|.|.+.+. + .+-+....-...+...++++++.+++++++|| ..
T Consensus 275 ---vw~~~l~~~~~~lv~~~~~~~lpl~l~~-~---------~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~ 341 (495)
T KOG2533|consen 275 ---VWPFSLCYFFLKLVNYGFSYWLPLYLKS-N---------GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFA 341 (495)
T ss_pred ---HHHHHHHHHHHhhccccHHHHHHHHHHc-C---------CCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHH
Confidence 2222333344444445555566654421 0 00111111122345567889999999999999 55
Q ss_pred hhHHHHHHHHHHHHHH-HHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHH-HHHHHHHH
Q 017592 241 RKLSITIMFTLSCLFL-LPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG-RIGGMVCP 318 (369)
Q Consensus 241 RR~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~-~i~~~~~p 318 (369)
||........+..... ..+.............+...+.............++....+.|.......+..+ ..++.++|
T Consensus 342 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 342 RRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 6655544333222222 111111111111111111112222334566778888888888888877776665 46666666
Q ss_pred HHHH
Q 017592 319 LVAV 322 (369)
Q Consensus 319 ~~~~ 322 (369)
.+..
T Consensus 422 ~~~~ 425 (495)
T KOG2533|consen 422 QLFR 425 (495)
T ss_pred hhcc
Confidence 5543
No 64
>PRK11043 putative transporter; Provisional
Probab=99.47 E-value=9.9e-11 Score=111.39 Aligned_cols=245 Identities=9% Similarity=0.085 Sum_probs=131.3
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPES 84 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpES 84 (369)
.|+|.+ +...+++.|+.|+++|+...+.......+|..++..+...+.+..+||..+.+.++..++..+..+++||+
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 455543 33446788999999998888887777777777777666566666899999988887777766655566665
Q ss_pred hhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch-
Q 017592 85 PRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK- 163 (369)
Q Consensus 85 P~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 163 (369)
++- .+.++. ..++++.++++
T Consensus 184 ~~~----~~~~~~-------------------------------------------------------~~~~~~~~~~~~ 204 (401)
T PRK11043 184 KKA----RKQSQD-------------------------------------------------------ALTFKQLLKSKT 204 (401)
T ss_pred CCc----cccchH-------------------------------------------------------HHHHHHHHcChh
Confidence 420 000000 00222333322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
.+...++ +......++....+.|.+.+. .+.+....-.......++.++|.++.+.+.||+|||+
T Consensus 205 ~~~~~~~----~~~~~~~~~~~~~~~p~~~~~-----------~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~ 269 (401)
T PRK11043 205 YLGNVLI----FAACSAAFFAWLTGSPFILEQ-----------MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ 269 (401)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHhHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 2211111 111112222222333333211 0111111112223334566778888899999999998
Q ss_pred HHHHHHHHHHHHHH---HHhh-ccchhHHHHH-HHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLL---PLVT-YQSNILTTGL-LFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 318 (369)
Q Consensus 244 ~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p 318 (369)
..........+... .... ..+....... .....+.....++.......|.+| +.|+++.|+.+..+..++..++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~ 348 (401)
T PRK11043 270 LLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLAS 348 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHH
Confidence 76443332222211 1111 1111111111 111122222334445556667777 4799999999998888888888
Q ss_pred HHHHHHHhh
Q 017592 319 LVAVALVAN 327 (369)
Q Consensus 319 ~~~~~l~~~ 327 (369)
.+.+.+.+.
T Consensus 349 ~~~g~l~~~ 357 (401)
T PRK11043 349 LLVSALIST 357 (401)
T ss_pred HHHHHccCC
Confidence 777766553
No 65
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.46 E-value=8.6e-11 Score=111.44 Aligned_cols=257 Identities=12% Similarity=-0.008 Sum_probs=139.3
Q ss_pred HhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCChhhHhhcCChHHH
Q 017592 18 SWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEA 97 (369)
Q Consensus 18 ~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g~~~~A 97 (369)
++..|..++|.|+.+.+....+..+|.++++.+...+.+..+||.+|.+.++..++..+..++++|.+. .+.++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~~ 194 (390)
T TIGR02718 120 GMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV-----ASPEAP 194 (390)
T ss_pred HHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc-----Cccccc
Confidence 366789999988888888888889999988866655566689999999888776665555444544221 000000
Q ss_pred HHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHHHHHHH
Q 017592 98 HRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFG 177 (369)
Q Consensus 98 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 177 (369)
+ + ...++.++++++..+..+...+....
T Consensus 195 -----------------------------~--------------------~---~~~~~~~~l~~~~~~~~~~~~~l~~~ 222 (390)
T TIGR02718 195 -----------------------------L--------------------A---RRASLFRFFRRPLAWSLLALALLSAM 222 (390)
T ss_pred -----------------------------h--------------------h---hHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 0 0 00123444544433333333322222
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHH-hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHH-
Q 017592 178 NSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS-LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLF- 255 (369)
Q Consensus 178 ~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~- 255 (369)
....+|+. ..+.+.+ .+.+....-......+ ...+++.++.++++||+|||+.+..+..+....
T Consensus 223 ~~~~~~~~--~~~~l~~------------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 288 (390)
T TIGR02718 223 TAVSGFGL--SKLYLVD------------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLA 288 (390)
T ss_pred HHHHHHHH--hhHHHHh------------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 22223321 1122211 0111111111111222 345667888999999999999887765544222
Q ss_pred HHHHhhc----cch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 017592 256 LLPLVTY----QSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPT-SVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 329 (369)
Q Consensus 256 ~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt-~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~ 329 (369)
....... ... .....+.....++........+....+..+. +.|++..++.+....++.+++|.+.+.+.+..+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G 368 (390)
T TIGR02718 289 LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG 368 (390)
T ss_pred HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111111 011 1111111111111122233445555566665 899999999999999999999999988887665
Q ss_pred hhHHHHHHHHHHHHHH
Q 017592 330 QMTAVVLLVVVIVTSI 345 (369)
Q Consensus 330 ~~~~~~~~~~~~~i~~ 345 (369)
....+...+++.+++.
T Consensus 369 ~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 369 YAGGFLSGTVLAVLAI 384 (390)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 4445555555444443
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.46 E-value=6e-11 Score=113.60 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=96.7
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc-ch--hH-HHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-SN--IL-TTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
..+..+..+++.+..+.++||+|||+++..+.++.++......... +. .. .....++.........+....+.+|.
T Consensus 257 ~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~ 336 (418)
T TIGR00889 257 MSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKE 336 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567788889999999999999999887776555433332211 11 11 11111111122222234556789999
Q ss_pred ccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHhhch------hhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCc
Q 017592 294 YPTSVRSTGAGAANA-MGRIGGMVCPLVAVALVANCH------QMTAVVLLVVVIVTSILSVMLIPFETKGQELSDT 363 (369)
Q Consensus 294 fPt~vR~~~~g~~~~-~~~i~~~~~p~~~~~l~~~~~------~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~ 363 (369)
+|++.|+++.|+.+. ...++++++|.+.+.+.+..+ ....+...+++.+++.++.+++.||+++.--.|.
T Consensus 337 ~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 413 (418)
T TIGR00889 337 VPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIKVDD 413 (418)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence 999999999999975 456899999999988877642 2345666677777777777777789877654443
No 67
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.46 E-value=5.2e-12 Score=115.89 Aligned_cols=271 Identities=17% Similarity=0.154 Sum_probs=154.0
Q ss_pred eeeeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCC---chhhHhhhhHHHHHHHH-HHh
Q 017592 6 AFWERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD---WRWLLGLSSIPSFILLA-FLG 79 (369)
Q Consensus 6 ~~~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~---WR~~~~~~~ip~~i~~~-~~~ 79 (369)
++.|++|+ .+..++++++.||+++|.+.++.. .-++|..+...++=.+....+ ||..-.+-.++.++..+ .++
T Consensus 113 ll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 113 LLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688886 566679999999999999999987 666666655444333333345 99887777666666444 444
Q ss_pred hccCChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHh
Q 017592 80 FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLML 159 (369)
Q Consensus 80 ~lpESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (369)
.+.+.|..-.+++.. +. .+++..
T Consensus 192 ~~~d~p~~r~~~~~~-----------------------------~~----------------------------~~~~~v 214 (417)
T COG2223 192 GMNDVPEHRASVKPQ-----------------------------LP----------------------------AQLKAV 214 (417)
T ss_pred HhCCChhhhcccccc-----------------------------ch----------------------------hHHHHH
Confidence 454444321000000 00 012222
Q ss_pred hcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhh---hHHHHHHHHH
Q 017592 160 FSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEI---PGLLLAAILV 236 (369)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~g~i~~~~l~ 236 (369)
+++ +++..+.+..+.+.-++-+...+.|.+.+.+ ...+... ...+..+..+ ..-.+.|+++
T Consensus 215 ~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~----------fg~~~~~---Ag~~a~~f~~~g~l~Rp~GG~Ls 278 (417)
T COG2223 215 FSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ----------FGLSPVT---AGLIAFLFPLIGALARPLGGWLS 278 (417)
T ss_pred hcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCChhh---HHHHHHHHHHHHHHHHhccchhh
Confidence 321 2233344444443334445555555443211 0111111 1122233333 3345789999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHhhcc------chhHHHHHHHHH-HHHHhhhhHHHHHhhcccccccchhhhHHHHHHH
Q 017592 237 DTAGRKLSITIMFTLSCLFLLPLVTYQ------SNILTTGLLFGA-RMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAM 309 (369)
Q Consensus 237 dr~GRR~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~ 309 (369)
||+|.|+++...+..++++........ .........+.. ..+....++..+-.++-+||.+ -+...|+...+
T Consensus 279 DR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~ 357 (417)
T COG2223 279 DRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAI 357 (417)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHh
Confidence 999999988887776666655544322 111111222222 2233334567888888899874 45567888899
Q ss_pred HHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHhc
Q 017592 310 GRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 310 ~~i~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
|.+|++.-|.......+..+ ....+.++..+.+++.+..+..
T Consensus 358 G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 358 GGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred ccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777665 3445666676666666655443
No 68
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=5.5e-12 Score=122.09 Aligned_cols=287 Identities=9% Similarity=0.004 Sum_probs=141.1
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHh-hccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLG-FQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~-~lpE 83 (369)
.|+|.+ +...+++.|+.| ++||+..++.+.+..+|..++..+.-.+....+||+.|.+.++..++..+..+ ..|+
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 355554 344467789986 78999999999999999888776665555668999999998877665543332 2333
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
.+.. .+.+. +.+ . +.+. +...+ +. +. ....++.+ ....+ .+++++
T Consensus 197 ~~~~--~~~~~-~~~---------~--~~~~-----------~~~~~--~~----~~--~~~~~~~~-~~~~~-~~~~~~ 241 (455)
T TIGR00892 197 GPSQ--RVSKS-KSK---------E--GLPP-----------DGSTK--KL----SK--KSTAEKIN-RFLDF-SLFTHR 241 (455)
T ss_pred Cccc--ccccc-ccc---------c--cCCC-----------CCccc--cc----cc--cchhhhhh-hhcch-HHhcCc
Confidence 2211 00000 000 0 0000 00000 00 00 00000000 00011 233322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh--hch
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT--AGR 241 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr--~GR 241 (369)
. ........+...+.++....+.+.+... .+.+....-....+.++..+++.++.+++.|| .++
T Consensus 242 ~---~~~~~~~~~l~~~~~~~~~~~l~~~~~~-----------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 307 (455)
T TIGR00892 242 G---FLVYLSGNVIMFLGFFAPIIFLVPYAKD-----------KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP 307 (455)
T ss_pred h---HHHHHHHHHHHHHHccchHHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH
Confidence 1 1222222222233334444343333211 01111111222334456667777888999997 333
Q ss_pred hHHHHH--HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITI--MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPL 319 (369)
Q Consensus 242 R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~ 319 (369)
|+.... +.+..++..+......+.+...+......+.........+.+..|.+|.+.|+++.|+.+....++++++|.
T Consensus 308 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~ 387 (455)
T TIGR00892 308 HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPP 387 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccc
Confidence 433322 222222222222222222221122222222222334566788889999999999999999999999999998
Q ss_pred HHHHHHhhch-hhHHHHHHHHHHHHH
Q 017592 320 VAVALVANCH-QMTAVVLLVVVIVTS 344 (369)
Q Consensus 320 ~~~~l~~~~~-~~~~~~~~~~~~~i~ 344 (369)
+...+.+..+ ....+.+.+++.+++
T Consensus 388 i~G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 388 LAGRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred ceeeeehhcCCcchHHHHhhHHHHHH
Confidence 8887766543 223444444433333
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.42 E-value=4.8e-11 Score=114.34 Aligned_cols=135 Identities=10% Similarity=0.029 Sum_probs=86.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+..+++.++.+.++||+|||+.+..+..+.++.........+.+......................+.+|.+|++.|
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 349 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLS 349 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccce
Confidence 44556778899999999999999988776555444433333332322222211111111112223456788999999999
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCc
Q 017592 300 STGAGAA-NAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 354 (369)
Q Consensus 300 ~~~~g~~-~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pE 354 (369)
+++.+.. +..+.++++++|...+.+.+..+...++...+++.++..++.++..++
T Consensus 350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 350 ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9987764 455678999999998888887665566776677666555555544443
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.42 E-value=3.2e-12 Score=119.88 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=57.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh-cc---chhHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQ---SNILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
.+..+..+++.++.++++||+|||+.+..+....+.....+.. .. +............+......+..+...+|++
T Consensus 268 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (366)
T TIGR00886 268 SLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF 347 (366)
T ss_pred HHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc
Confidence 3445567788889999999999988766554433332222222 11 1111112222222222223456788899999
Q ss_pred cccchhhhHHHHHHHHHHH
Q 017592 295 PTSVRSTGAGAANAMGRIG 313 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~ 313 (369)
| +.|+++.|+.+.+++++
T Consensus 348 ~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 348 R-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred h-hhcccHHHHHHHhccCC
Confidence 8 69999999998887765
No 71
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.42 E-value=3.5e-11 Score=129.33 Aligned_cols=256 Identities=13% Similarity=-0.047 Sum_probs=144.1
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccC
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 83 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpE 83 (369)
+.|++.+ |+..+++.|+.|+++|+.+.++.+...++|.+++..++.++....+||..|...++..++.++..+++||
T Consensus 117 l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1140)
T PRK06814 117 LMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPK 196 (1140)
T ss_pred HHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4466553 7777899999999999999999999999999999888877777789999996666666655666666776
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
++.= .+++.. .. .. .+.....++...+.+
T Consensus 197 ~~~~--~~~~~~------------------------------~~--------~~-----------~~~~~~~~~~~~~~~ 225 (1140)
T PRK06814 197 TGNA--APDLKI------------------------------DR--------NI-----------IRSTITLLKYAKADK 225 (1140)
T ss_pred CCCC--CCCCee------------------------------cc--------ch-----------HHHHHHHHHHHhcCc
Confidence 5410 000000 00 00 000011234444333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
..+...+.. +...+.+++...+.|.+... ..+.+....-......+++.++|.++.+.++|+.++++
T Consensus 226 ~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~----------~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 226 RIWLAILGI---SWFWLVGAVVLSQLPLLAKE----------TLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL 292 (1140)
T ss_pred hHHHHHHHH---HHHHHHHHHHHHHhHHHHHH----------HcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence 222222111 11112222333333332211 00111111112234455677888999999998877666
Q ss_pred HHHHHHHHHHHHHHHHhhc--------------------cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhH
Q 017592 244 SITIMFTLSCLFLLPLVTY--------------------QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 303 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~ 303 (369)
.+..+.++.+++.+.+... .+.+...+..++..++..........+..+..|.+.|+++.
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~ 372 (1140)
T PRK06814 293 YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVI 372 (1140)
T ss_pred eehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeee
Confidence 5544333322222111110 11121112222222222233345788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 017592 304 GAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 304 g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
|+.+.++.++..+++.+...+..
T Consensus 373 g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 373 AANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998988888887776653
No 72
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.40 E-value=4.2e-11 Score=114.99 Aligned_cols=288 Identities=17% Similarity=0.247 Sum_probs=165.9
Q ss_pred eccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhhHhhhhHHHHHHHHHH-hhccC
Q 017592 9 ERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFL-GFQPE 83 (369)
Q Consensus 9 G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~-~~WR~~~~~~~ip~~i~~~~~-~~lpE 83 (369)
|++.+ |..+...+.|+|+++|++..++...+..+|.+++-.++-.+... .||+..|++.++.+++..+++ ++--|
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 65555 66677889999999999999999999999999887666666555 899999999998888876554 44566
Q ss_pred ChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcch
Q 017592 84 SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK 163 (369)
Q Consensus 84 SP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (369)
+|+- +.+..+.| ++++++...++ + .+++...+++.+++.+
T Consensus 219 ~P~~---h~~is~~E--l~~I~~~k~~~---------------~--------------------~~~~~~vP~~~i~ts~ 258 (466)
T KOG2532|consen 219 SPSK---HPNISEKE--LKYIEKGKSEA---------------H--------------------VKKKPPVPYKAILTSP 258 (466)
T ss_pred Cccc---CCCCCHHH--HHHHHhccccc---------------c--------------------cCCCCCCCHHHHHcCH
Confidence 7743 22222222 22222110000 0 0000112566666543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh-
Q 017592 164 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK- 242 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR- 242 (369)
. .+.+++..++....+|.+..+.|.+.+.. ...+..+.. + ...+..+...+..++++.++||+-+|
T Consensus 259 ~---vwai~~~~f~~~~~~~~l~~y~PtY~~~V--------L~f~v~~~G-~-~salP~l~~~~~k~~~g~lsD~l~~~~ 325 (466)
T KOG2532|consen 259 P---VWAIWISAFGGNWGFYLLLTYLPTYLKEV--------LGFDVRETG-F-LSALPFLAMAIVKFVAGQLSDRLTFRI 325 (466)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhhHHHHHH--------hCCChhhhh-H-HHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2 33344555566666777777777655321 011111112 2 22344566677788999999998553
Q ss_pred -------HHH-HHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHhhhhHHHHHhhcccc-cccchhhhHHHHHHHHH
Q 017592 243 -------LSI-TIMFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVSLIYAAEIY-PTSVRSTGAGAANAMGR 311 (369)
Q Consensus 243 -------~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~vR~~~~g~~~~~~~ 311 (369)
+++ .++..+.+++++.+.+.. ..+...+++.+... ..+. ...-.+.+-.- .++.-+..+|+++.++.
T Consensus 326 ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~-~~g~-~~~Gf~~~~~~~apq~a~~l~g~~~~~~~ 403 (466)
T KOG2532|consen 326 LSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIG-LSGF-NISGFYKNHQDIAPQHAGFVMGIINFVGA 403 (466)
T ss_pred CchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHH-Hccc-chhhhHhhhhhccchHHHHHHHHHHHHHH
Confidence 332 234444455554444422 22233333322221 1222 12222333333 67788899999999999
Q ss_pred HHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHHHHHHHHHhc
Q 017592 312 IGGMVCPLVAVALVANC---HQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 312 i~~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
+.++++|.+...+.... .+...|++.+++.+++.++..++
T Consensus 404 ~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 404 LAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999988776321 23344555566666655443333
No 73
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.39 E-value=1.3e-09 Score=105.37 Aligned_cols=146 Identities=19% Similarity=0.198 Sum_probs=101.3
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchh--HHHHHHHHHHHHH-HHHHh-h------ccchhHHHHHHHHHHHHHhhh
Q 017592 213 NLYIDEFITSLAEIPGLLLAAILVDTAGRK--LSITIMFTLSCLF-LLPLV-T------YQSNILTTGLLFGARMCVMGA 282 (369)
Q Consensus 213 ~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR--~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~~~~~~~~~~~~ 282 (369)
+.....++..+..++|.++.+++.||+|-| +++..+.....+. ...+. . ..+.+..+++....+.+..+.
T Consensus 318 ~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~ 397 (477)
T PF11700_consen 318 QLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGI 397 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhH
Confidence 334455677888999999999999999999 6666554433222 22221 0 123334444444444555666
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHhccCcCCCCC
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQE 359 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pETkg~~ 359 (369)
++....+.+|+-|....+.-+|+-...++..++++|++...+.+..+ ....+....++.+++.++. +..++.||+.
T Consensus 398 qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 398 QSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 78899999999999999999999999999999999999988877665 3334454455555554444 5557777764
No 74
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.39 E-value=1.2e-10 Score=110.91 Aligned_cols=76 Identities=13% Similarity=0.157 Sum_probs=57.4
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|++.+ +...+++.|..|+++||+..++......+|..++..++..+. .++||..|.+.++..++..+ ..+.+|
T Consensus 108 l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~ 186 (400)
T PRK11646 108 LSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLP 186 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455554 455678899999999999999999999999988877766655 57999999988776665433 334556
Q ss_pred C
Q 017592 83 E 83 (369)
Q Consensus 83 E 83 (369)
|
T Consensus 187 ~ 187 (400)
T PRK11646 187 A 187 (400)
T ss_pred c
Confidence 5
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.38 E-value=4.2e-10 Score=106.47 Aligned_cols=127 Identities=13% Similarity=-0.021 Sum_probs=82.1
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..+.++++..+.+.+.||+|+|+++..+.+.+.+......+..+.+.....-..-.+.....+.....+..+. |.+.
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~ 325 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE 325 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh
Confidence 345667788888899999999999998877776665544433322222211111111111222334455677787 9999
Q ss_pred hhhhHHHHHHHH-HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 017592 299 RSTGAGAANAMG-RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 347 (369)
Q Consensus 299 R~~~~g~~~~~~-~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 347 (369)
|+++.++-+..+ .++.+++|.+.+.+.+..+. ..++..+++.+++.++
T Consensus 326 ~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 326 IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999976554 47888899999988887653 4566666666655444
No 76
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.38 E-value=2.7e-10 Score=111.57 Aligned_cols=295 Identities=13% Similarity=0.041 Sum_probs=144.7
Q ss_pred eeeeccCcc---hhhHhHhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhh
Q 017592 6 AFWERRCGH---VFLSWFLEF-VPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGF 80 (369)
Q Consensus 6 ~~~G~g~~~---~~~~y~~E~-~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~ 80 (369)
.+.|+|++. .....+.+. .|+++|+++.++....+.+|..++..++..+.+..+||+.|++.....++.+ +..+.
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHh
Confidence 345777653 333445454 5789999999999999999999998888887788899999988765555443 44567
Q ss_pred ccCChhhHhhcCChHHHHHHHH------HHHHHc-CCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchh
Q 017592 81 QPESPRYLCLKGRTAEAHRALE------KIAQVN-KTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGL 153 (369)
Q Consensus 81 lpESP~~l~~~g~~~~A~~~l~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (369)
+||+|.- .+.+.|.....+. ...... ..+........ ...-.-...-....... +.+ .+...
T Consensus 182 l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~f~~~--e~~---~~~p~ 250 (495)
T PRK14995 182 VPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVT----SLTLLTGALLLGLFIRT--QLA---ASRPM 250 (495)
T ss_pred CCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHH----HHHHHHHHHHHHHHHHH--Hhc---CCCCC
Confidence 8987642 1112221111110 000000 00000000000 00000000000000000 000 00000
Q ss_pred hHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHH
Q 017592 154 SLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAA 233 (369)
Q Consensus 154 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~ 233 (369)
.+ ..+++++... ......+.....+++...+.|...+.. .+.+....-.......+...++.++.+
T Consensus 251 ~~-~~lf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lq~v----------~g~s~~~ag~~~~~~~~~~~~~~~~~g 316 (495)
T PRK14995 251 ID-MRLFTHRIIL---SGVVMAMTAMITLVGFELLMAQELQFV----------HGLSPLEAGMFMLPVMVASGFSGPIAG 316 (495)
T ss_pred cC-HHHhCCcccH---HHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 2234332211 111222222233444444444322110 011111112223344566777889999
Q ss_pred HHHhhhchhHHHHHHHHHHHHHHHHHhh-c--cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHH
Q 017592 234 ILVDTAGRKLSITIMFTLSCLFLLPLVT-Y--QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG 310 (369)
Q Consensus 234 ~l~dr~GRR~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~ 310 (369)
.++||+|||+.+..+..+.++....+.. . .+.+......+...+..............+..|.+.|+.+.++.+...
T Consensus 317 ~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 317 ILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHH
Confidence 9999999999887766554443322222 1 122222222222222222233445667778899999999999998888
Q ss_pred HHHHHHHHHHHHHHH
Q 017592 311 RIGGMVCPLVAVALV 325 (369)
Q Consensus 311 ~i~~~~~p~~~~~l~ 325 (369)
.+|+.+++.+...+.
T Consensus 397 ~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 397 ELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877776555443
No 77
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=1.5e-09 Score=102.63 Aligned_cols=123 Identities=17% Similarity=0.164 Sum_probs=77.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+..+++.+..+.++||+|||+.+..+.....+...... .. ... ...............+.......|..|.+.+
T Consensus 243 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~-~~~-~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~ 319 (381)
T PRK03633 243 LLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ-AAM-APALFILGAAGFTLYPVAMAWACEKVEHHEL 319 (381)
T ss_pred HHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh-HHH-HHHHHHHHHHHHhHHHHHHHHHHccCCHHHH
Confidence 44566788888999999999999988766554443322222 11 111 1111111111223345566778899998877
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 345 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 345 (369)
....+..+....+++.++|.+...+.+..+....+.+.+.+.++..
T Consensus 320 ~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 320 VAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 7777776666678999999999888887665555666555555543
No 78
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=7.7e-10 Score=105.17 Aligned_cols=263 Identities=13% Similarity=0.071 Sum_probs=137.1
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESP~~l~~~g 92 (369)
+...++..|..|+++|++..++.....++|..++..+...+.. .+||.+|.+.++..++..+ ..+++||.++ ++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~----~~ 189 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK----AI 189 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc----cc
Confidence 4455688999999999999999999999999888777655543 6899999988776666543 3344555321 00
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc-hhhhHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS-KLARTTILL 171 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 171 (369)
+. +.. + . .+.++.+++ +.+.-.+..
T Consensus 190 ~~-~~~----------------------------~---------------------~----~~~~~~~~~~~~~~~~~~~ 215 (395)
T PRK10054 190 AT-ETG----------------------------S---------------------V----WSPSVLLQDKALLWFTCSG 215 (395)
T ss_pred cc-chh----------------------------h---------------------h----hhhhhhccCceehHHHHHH
Confidence 00 000 0 0 000111221 221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHH
Q 017592 172 WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL 251 (369)
Q Consensus 172 ~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~ 251 (369)
.+..+...........+.+...+ .+..............+...+.....+.+.||.+||+.+..+..+
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~ 283 (395)
T PRK10054 216 FLASFVSGAFASCISQYVMVVAD------------SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLC 283 (395)
T ss_pred HHHHHHHHHhhhhHHHHHHHhcc------------cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHH
Confidence 11111111100011111111110 011111111111222233444556778899999999988776654
Q ss_pred HHHHHHHHhhccch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 017592 252 SCLFLLPLVTYQSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 330 (369)
Q Consensus 252 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~ 330 (369)
.++.........++ +...+......+......+....+..+.-|++.|++..+.. +.++++..++|.....+.+..+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 284 FVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ-SLGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH-HHHHHHHHHHHHHHHHHHHHcCh
Confidence 44433333222122 11111122222222222334567888999999999998864 46778999999999988887655
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 017592 331 MTAVVLLVVVIVTSILSV 348 (369)
Q Consensus 331 ~~~~~~~~~~~~i~~~~~ 348 (369)
...+.+.+++..++.++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 363 WSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 444555444444433333
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.33 E-value=1.3e-09 Score=103.53 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=83.8
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+...++.+..+.+.||+|||+.+..+..+.++.........+.+...........+..........+..|.+|.+.|
T Consensus 262 ~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 341 (396)
T TIGR00882 262 MGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLS 341 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceE
Confidence 44556677788899999999999988776655444333322222222222222222222222223455677899999999
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHh
Q 017592 300 STGAGAA-NAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVML 350 (369)
Q Consensus 300 ~~~~g~~-~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 350 (369)
+++.+.. +....++++++|.+..++.+..+...++.+.+++.++..+...+
T Consensus 342 at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 342 ATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred EEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9988874 55667999999999998888766556677767666665555433
No 80
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.33 E-value=9e-10 Score=105.16 Aligned_cols=102 Identities=12% Similarity=0.047 Sum_probs=73.8
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhh
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 302 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~ 302 (369)
....+|-++++++.||+++|+++.++.++++++.+......+. ....++....++....++..+....+.++.+.+..+
T Consensus 280 ~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s 358 (410)
T TIGR00885 280 VIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGA 358 (410)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 4567889999999999999998877766666555444432222 223333444455667788899999999998887667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 017592 303 AGAANAMGRIGGMVCPLVAVALVAN 327 (369)
Q Consensus 303 ~g~~~~~~~i~~~~~p~~~~~l~~~ 327 (369)
.++..++ +|+.+.|.+.+.+.|.
T Consensus 359 ~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 359 AGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHH--hccchHHHHHHHHHHH
Confidence 7766655 8999999998888774
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=9.2e-10 Score=104.14 Aligned_cols=124 Identities=8% Similarity=-0.050 Sum_probs=72.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+..+++..+.+.+.||+|+|+.+..+....++..+......+.+......+...++........-.+..+. |.+.+
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~ 326 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEV 326 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhh
Confidence 44556777788899999999999998777665555443333322222222222222222112223344455666 55557
Q ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 017592 300 STGAGAANAMGR-IGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 345 (369)
Q Consensus 300 ~~~~g~~~~~~~-i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 345 (369)
++..+..+..+. ++..++|.+.+.+.+..+. ..++..+++.+++.
T Consensus 327 ~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 327 IRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 888887765553 5668889998888776653 34554455544443
No 82
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.32 E-value=1.6e-09 Score=99.50 Aligned_cols=114 Identities=13% Similarity=0.140 Sum_probs=74.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.....+..+|.++++.++||+|+|+.+..+..++++..+......... .........++....++.......+.+|.+.
T Consensus 185 s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~ 263 (310)
T TIGR01272 185 AYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT 263 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344556778999999999999999988776655554443332222221 1222233344555667777888888888753
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVV 335 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~ 335 (369)
+++.++ ..++.+|+.+.|.+.+.+.+..+...+++
T Consensus 264 -~~asai-~~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 264 -SQGSGI-LCLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred -hhhHHH-HHHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 455566 36778999999988888777655444443
No 83
>PRK10133 L-fucose transporter; Provisional
Probab=99.31 E-value=1.9e-09 Score=103.82 Aligned_cols=116 Identities=11% Similarity=-0.016 Sum_probs=73.0
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....++.++|.++++++.||+|||+++..+..+++..+.......+. ..........++....++..+....|.+|.+
T Consensus 301 ~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~ 379 (438)
T PRK10133 301 LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD 379 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh
Confidence 345566778899999999999999998877765554433333322222 1222233334445566778888999998875
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHH
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVL 336 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-~~~~~~~ 336 (369)
-+++.++.. ++.+++.+.|.+...+.+..+ ...++++
T Consensus 380 -~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 380 -TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred -hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 456666664 344667777777776666544 3334443
No 84
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=1.4e-10 Score=92.52 Aligned_cols=133 Identities=17% Similarity=0.167 Sum_probs=92.5
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhh
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 302 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~ 302 (369)
++.+++.++.+.+.||+|||+.+..+.....+..+......+........+...+......+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 44566778899999999999998877665554444333322222222222333333333456678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 303 AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 303 ~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.++.+....++..++|.+.+.+.+..+....+.+.+.+.+++.+..+++.|||
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999998888777655544566666666666666666666775
No 85
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.28 E-value=3.8e-09 Score=100.23 Aligned_cols=78 Identities=6% Similarity=0.008 Sum_probs=57.3
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpE 83 (369)
.|++.+ +....+..|..|+++|+.+.+..+.+..+|.+++..+...+.+..+||..+.+.++..++. .+..+++||
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 355543 3444567899999999999999888888888887777666666689999998887655544 344566888
Q ss_pred Ch
Q 017592 84 SP 85 (369)
Q Consensus 84 SP 85 (369)
+|
T Consensus 186 ~~ 187 (394)
T PRK11652 186 TR 187 (394)
T ss_pred cC
Confidence 75
No 86
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.27 E-value=6e-10 Score=104.24 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=129.6
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCC--CchhhHhhhhHHHHHHHHHHhhcc
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL--DWRWLLGLSSIPSFILLAFLGFQP 82 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~--~WR~~~~~~~ip~~i~~~~~~~lp 82 (369)
.|+|.+ +....++.|+.| ++||++.+..+....+|..++..+...+.+.. +||..+...++..++.. ..++|
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~ 173 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIP 173 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhh
Confidence 355543 344456788886 57999999999999999888776654443332 49998877665544332 23345
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcc
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS 162 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (369)
|+++ +. + ++ + +.. ++ ..++.+++
T Consensus 174 ~~~~------~~-~-------------~~----------~---~~~--------------------~~----~~~~~~~~ 196 (355)
T TIGR00896 174 QVRR------RV-A-------------AN----------Q---TTT--------------------RL----TPVRIWRS 196 (355)
T ss_pred hhcc------cc-C-------------CC----------C---CCC--------------------CC----CCchhhcC
Confidence 4321 00 0 00 0 000 00 01112222
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh-ch
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-GR 241 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~-GR 241 (369)
+. ........+.....+++...+.|.+.... +.+....-....+..++.+++.++.+++.||+ +|
T Consensus 197 ~~---~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 197 PL---AWQVTVFFGLQSGLYYSLIGWLPAILISH-----------GASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred Hh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 11 11112222333445555555555443210 11111111223345677888999999999999 55
Q ss_pred hHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccc-ccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEI-YPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 242 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El-fPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
|..+..+..+.++.........+..... ...+..+.....++.......+. .+++.+++..++.+..+.+++.++|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 263 RGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555554444433332222222221111 11122222222334444444444 456778888999999999999999999
Q ss_pred HHHHHhhch
Q 017592 321 AVALVANCH 329 (369)
Q Consensus 321 ~~~l~~~~~ 329 (369)
...+.+..+
T Consensus 342 ~G~l~~~~g 350 (355)
T TIGR00896 342 VGVLHDISG 350 (355)
T ss_pred HHHHHHHhc
Confidence 888877654
No 87
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=4.9e-10 Score=106.73 Aligned_cols=139 Identities=18% Similarity=0.105 Sum_probs=91.4
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....++..++.++.+.++||+|||+++..+.++..+..+......+.....+..++..+......+....+.+|.+|.+
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 135 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH
Confidence 34555677888999999999999999998876655444433333322222222222222222333456678899999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.|+++.++.+....+++.++|.+...+.+..++...+++.+++.++..+...++.||+.
T Consensus 136 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 136 LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999998888899898887765555444445566655555554444445557764
No 88
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=5.4e-10 Score=105.38 Aligned_cols=141 Identities=18% Similarity=0.072 Sum_probs=96.5
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....++..++.++.+.++||+|||+.+..+..+.++..+......+.+......+...+...........+..|.+|.+
T Consensus 46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 125 (385)
T TIGR00710 46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE 125 (385)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH
Confidence 34445667888899999999999999998876655554444333322222222222222222233456678899999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
.|+++.++.+....++..++|.+...+.+..++...+.+.+.+.++..+..++..||++.+
T Consensus 126 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 126 ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999998888777665555566666666666555555666787644
No 89
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=9.6e-10 Score=107.11 Aligned_cols=181 Identities=13% Similarity=0.160 Sum_probs=103.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 017592 162 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GR 241 (369)
++.++.....+..++......++...+.|.+... .+.+............++..++.++.++++||+||
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~ 100 (476)
T PLN00028 32 RPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDN-----------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGP 100 (476)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445555555555555555555555555544321 11111111122334455677888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 242 KLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 242 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
|+++..+.++.++..+......+.....++-++..++. +.......+.+|.||.+.|+++.|+.+..+.+++.+++.+.
T Consensus 101 r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~-~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 101 RYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSL-ATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 99888766655554443333222222222222222222 22223445788999999999999999888777777776655
Q ss_pred HHHHh----h-----chhhHHHHHHHHHHHHHHHHHHhccCc
Q 017592 322 VALVA----N-----CHQMTAVVLLVVVIVTSILSVMLIPFE 354 (369)
Q Consensus 322 ~~l~~----~-----~~~~~~~~~~~~~~~i~~~~~~~~~pE 354 (369)
+.+.. . .++...+++.+++.++..+..++++++
T Consensus 180 ~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 180 PLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 54322 1 234456666676666655555555433
No 90
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.25 E-value=1e-09 Score=104.93 Aligned_cols=139 Identities=10% Similarity=-0.061 Sum_probs=92.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....++..++.+..+.+.||+|||+++..+.++..+..+...+..+.......-+...+.....++....+.+|.||.+.
T Consensus 50 s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 129 (412)
T TIGR02332 50 TLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF 129 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH
Confidence 34455667778889999999999999887766555444443332222222222222223333334556678899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh------chhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVAN------CHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~------~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
|+++.++.+....++..++|.+..++... .++...+.+.++..++..++.+++.||++.
T Consensus 130 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 130 RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999988889999998887766531 345556666666666555556666678763
No 91
>TIGR00895 2A0115 benzoate transport.
Probab=99.24 E-value=3.1e-10 Score=107.24 Aligned_cols=138 Identities=20% Similarity=0.078 Sum_probs=92.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..+...++.++.+.++||+|||+.+..+..+.++..+......+........++..++....++....+.+|.+|.+.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34456678888999999999999999988766555544433333222222222222222223345667889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|+++.|+......++..++|.+.+.+.+..++...+.+.+...++..++.+.+.||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999998889999999988887766555444555555455444455555567764
No 92
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.23 E-value=6.3e-09 Score=101.68 Aligned_cols=278 Identities=15% Similarity=0.011 Sum_probs=151.5
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCChhhHhhcCC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGR 93 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g~ 93 (369)
|...+.+-|..|+++-..++++.+...++..+++..++..+....|=...|.+.++-.++.+......+..+ .+++
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~----~~~~ 197 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP----PPSS 197 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc----cccc
Confidence 566678899999999998999888888877766655554443334555567766654444333322222100 0000
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHHH
Q 017592 94 TAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWL 173 (369)
Q Consensus 94 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 173 (369)
...++ .. +.....++...+.+..+..++...
T Consensus 198 -~~~e~-------------------------------------~~-----------~~l~~G~ryv~~~~~l~~~l~~~~ 228 (524)
T PF05977_consen 198 -LPRER-------------------------------------FF-----------SALREGLRYVRSSPPLRSVLLRSF 228 (524)
T ss_pred -cchhh-------------------------------------hh-----------hhHHHHHHHHhcchHHHHHHHHHH
Confidence 00000 00 000113344444444444333333
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHH
Q 017592 174 LLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSC 253 (369)
Q Consensus 174 ~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~ 253 (369)
.+......++.+ .|.+... ..+......-+.....+++.++|.++...+.+|+++++++..+.++.+
T Consensus 229 ~~~l~~~a~~aL---lPl~a~~----------~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 229 LFNLFASAVWAL---LPLFARD----------VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFA 295 (524)
T ss_pred HHHHhhhHHHHh---hhHHHHH----------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHH
Confidence 222222222322 2322210 011111111122234466777788888888888888888777766666
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 017592 254 LFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTA 333 (369)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~ 333 (369)
+..+.+.+..+.+.....+++.+++.........+..-+.-|.++|++..|+...+...+..++.++.+.+.+..+...+
T Consensus 296 ~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~a 375 (524)
T PF05977_consen 296 LALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTA 375 (524)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 55555444444444334444444444444455667778999999999999999888777777777787777776665555
Q ss_pred HHHHHHHHHHHHHHHHhc-cCcCCC
Q 017592 334 VVLLVVVIVTSILSVMLI-PFETKG 357 (369)
Q Consensus 334 ~~~~~~~~~i~~~~~~~~-~pETkg 357 (369)
+.+.++..+++.++.... +|+.+.
T Consensus 376 l~~a~~~lll~~~~~~~~~l~~~~~ 400 (524)
T PF05977_consen 376 LLIAGAALLLSALIALRFPLRQGEE 400 (524)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccc
Confidence 555555555555444333 344443
No 93
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.23 E-value=1e-09 Score=104.64 Aligned_cols=140 Identities=18% Similarity=0.061 Sum_probs=93.1
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....+...++.++.+.++||+|||+++..+....++..+......+........+..........+..+.+..|.+|.+.
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 34456677788899999999999999887766555544443332222222222222222222223566788899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
|.++.++......++..++|.+...+.+..++...+++.+++.+++.+..++..||++.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 999999988888888888998877776655555567666766666665555566887643
No 94
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.22 E-value=8.4e-09 Score=98.66 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=59.8
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH-HhhccC
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQPE 83 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpE 83 (369)
.|+|.+ +...+++.|+.|+++|++..+.......+|..++..++..+.+..+||..|.+.++..++..+. .+.+||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 355543 3344677899999999999999999888998888777766666679999999988877766543 456898
Q ss_pred Ch
Q 017592 84 SP 85 (369)
Q Consensus 84 SP 85 (369)
++
T Consensus 194 ~~ 195 (413)
T PRK15403 194 TV 195 (413)
T ss_pred Cc
Confidence 75
No 95
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.22 E-value=1.5e-09 Score=109.88 Aligned_cols=107 Identities=21% Similarity=0.204 Sum_probs=76.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..++.++|.++.++++||+|||+.++.+.++.++..+...+..+.....++-++..++..+..+..+.+.+|.+|.+.
T Consensus 209 s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~ 288 (742)
T TIGR01299 209 LIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK 288 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 34457788899999999999999999988766555544443332222222233333444444556788999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
|++..++......+|+++++.+...+.
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888887665444
No 96
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.22 E-value=1.3e-09 Score=103.28 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=93.6
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..++..++.++.+.++||+|||+.+..+....++.........+........+.........+...+.+.+|.+|.+.
T Consensus 45 ~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 124 (392)
T PRK10473 45 SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR 124 (392)
T ss_pred HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence 34455667788899999999999999887766555444333332222221222222222222334567889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
|+++.++.+....++..++|.+...+.+..++...+.+.+.+.++..++.++..||++.+
T Consensus 125 r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 125 RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999988888889998877665555555566666666666555555556787644
No 97
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.21 E-value=2.7e-09 Score=99.13 Aligned_cols=140 Identities=19% Similarity=0.053 Sum_probs=95.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 217 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
......+...++.++.+.++||+|||+++..+.++.++..+...+..+.+......++...+.....+....+..|.+|.
T Consensus 37 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 116 (352)
T PF07690_consen 37 LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPP 116 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchh
Confidence 34455667788899999999999999988887766655533323222333222233333333344556788899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+.|+++.++.+....++.+++|.+...+.+..++...+++.+++.++..++...+.++++
T Consensus 117 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 117 EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 999999999999999999999998887765555555677777777776655434444443
No 98
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=3.2e-09 Score=100.94 Aligned_cols=138 Identities=12% Similarity=0.032 Sum_probs=93.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
...+...++.++.+.++||+|||+.+..+.++.++..+......+.+....+-+...+......+....+.+|.+|.+.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 44566677888999999999999999887776665444433332222222222233333333455677888999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
+++.++......++..++|.+...+.+..++...+++.+.+.++..+......||+++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~ 200 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG 200 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence 9999999998889999999888877776665556666665555544444444577643
No 99
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=2.1e-09 Score=102.83 Aligned_cols=138 Identities=14% Similarity=0.060 Sum_probs=93.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..++..++.++.+.++||+|||+++..+..+.++..+......+.....+.-++..+.........+.+..|.||.+.|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33456677888999999999999998877665554444333333322222222222222222234567889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
++..++.+....++..++|.+...+.+..++...+++.+++.+++.+..++..|||+.
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999889999999888777665556667777777666665555555688864
No 100
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.20 E-value=6.9e-10 Score=104.44 Aligned_cols=140 Identities=13% Similarity=0.054 Sum_probs=96.3
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..+...++.++.+.++||+|||+.+..+.++.++.........+.+......++..++.....+....+.+|.+|++
T Consensus 35 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T TIGR00893 35 FSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS 114 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH
Confidence 34556677888899999999999999988776655554444333222222222222333333334456788999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
.|+++.++......++..++|.+...+.+..++...+...+++.++..+..+++.||++.
T Consensus 115 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 115 ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 999999999999999999999888877666555556666666666555555555566543
No 101
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=2.2e-09 Score=102.08 Aligned_cols=136 Identities=14% Similarity=0.020 Sum_probs=88.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+..+++.++.|.++||+|||+++..+.+..++..+...+..+.+....+............+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 130 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK 130 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH
Confidence 44456777888999999999999988776655544433333322222211111111111122234567888999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+++.|+.+....++..++|.+...+.+ .+...++...+++.+++.+...++.||++
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999988887654 34445666666666665554444445543
No 102
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.19 E-value=2.2e-09 Score=103.40 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=92.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....+...++.++.++++||+|||+++..+.++.++..+......+.+......+...+.....++....+.+|.||.+.
T Consensus 65 ~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 65 TLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 34556778888999999999999999888777666555444332222222122222222222234566788999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
|+++.|+.+....+++.++|.+...+.+..++...+.+.+++.++..+...++.||+
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998888777766655566666655544444444444554
No 103
>PRK10504 putative transporter; Provisional
Probab=99.18 E-value=3.5e-09 Score=102.96 Aligned_cols=181 Identities=11% Similarity=-0.013 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 244 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~ 244 (369)
+++..+++...+.+.+.++....+.|.+.+. .+.+.....+......+...++.++.+.++||+|||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~ 77 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS-----------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI 77 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-----------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3344445555555555555555556655421 11121111122233345567788899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 245 ITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
+..+..+.++..+......+........+...++.....+....+..|.+|.+.|+++.|+......++..++|.+...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 78 FFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 88765554444333333222222222222222222233456778889999999999999999988889999999888877
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 325 VANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+..++...+.+......++.+......|+.+
T Consensus 158 ~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 158 VEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 77665555566555555555555555555543
No 104
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.18 E-value=2.5e-09 Score=104.69 Aligned_cols=182 Identities=16% Similarity=0.111 Sum_probs=107.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchh
Q 017592 163 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 242 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR 242 (369)
+.++....+++.++.+.+.++......|.+.+. .+.+............++..++.++.+.++||+|||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r 85 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGE-----------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR 85 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 334444555555555555555555555544321 111111112223344566778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 243 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
+++..+.++.++..+......+.+......+...++..+.++....+..|.+|.+.|+++.++......++++++|.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 165 (496)
T PRK03893 86 LAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYS 165 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887766555544443333222222222222333333445667788999999999999999999888999999998888
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 323 ALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+.+..++...+.+ +++.++..++.....||++
T Consensus 166 ~l~~~~~w~~~f~~-~~~~~~~~~~~~~~~p~~~ 198 (496)
T PRK03893 166 LVVPVWGWRALFFI-GILPIIFALWLRKNLPEAE 198 (496)
T ss_pred HHhccCCHHHHHHH-HHHHHHHHHHHHHhCCCch
Confidence 77765554444443 2222222223333346654
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.18 E-value=2.2e-09 Score=103.78 Aligned_cols=166 Identities=14% Similarity=0.111 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh-chhHHHHH
Q 017592 169 ILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-GRKLSITI 247 (369)
Q Consensus 169 ~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~-GRR~~~~~ 247 (369)
..+....+...++||+...+.|.+.... .+.+................++.+++|+++||+ |||+.+..
T Consensus 12 ~~l~~~~~~e~fs~Yg~~~~L~~yL~~~----------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 12 YYVVALQIWEYFSFYGMRALLILYLTNQ----------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML 81 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 3333344455677888877666543210 111212222223344455677888999999999 99999887
Q ss_pred HHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHhhh-hHHHHHhhccccccc--chhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 248 MFTLSCLFLLPLVTYQ-SNILTTGLLFGARMCVMGA-FTVSLIYAAEIYPTS--VRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ElfPt~--vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
+.++..+..+.+.... ........+..... ..+. .+....+.+|+||++ .|.++.++.+..++++++++|.+.++
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 7665544433332211 11111111111111 1222 234567899999986 79999999999999999999999998
Q ss_pred HHhhchhhHHHHHHHHHHHHHH
Q 017592 324 LVANCHQMTAVVLLVVVIVTSI 345 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i~~ 345 (369)
+.+..++...+...++..+++.
T Consensus 161 L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred HHhhhChHHHHHHHHHHHHHHH
Confidence 8776555555555444334433
No 106
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.17 E-value=1.9e-09 Score=105.17 Aligned_cols=140 Identities=14% Similarity=0.006 Sum_probs=95.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....++..++.++.+.++||+|||+.+..+.++.++..+......+.......-+...++.....+....+..|.+|.+
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 122 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE 122 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH
Confidence 34556777888899999999999999998876655554444333322222222222222333334456788999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
.|+++.++......++..++|.+.+.+.+..++...+++.+.+.++..++..++.||++.
T Consensus 123 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 123 KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999888889999999888877766555555666555555555555555666544
No 107
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.17 E-value=3.7e-09 Score=100.24 Aligned_cols=180 Identities=16% Similarity=0.128 Sum_probs=104.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 244 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~ 244 (369)
++.....++.++...+..+......+.+.+.. +.+....-....+..+...++.++.+.++||+|||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~ 79 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF-----------GLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP 79 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44444455555555555555544445443211 1111111223344556778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 245 ITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
+..+.++.++..+......+........++...+....++....+..|.+|.+.|+++.++.+....++.++++.+...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 80 MVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776655544433333222222222222222323334456778899999999999999999988889999999887766
Q ss_pred Hhhch--hhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 325 VANCH--QMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 325 ~~~~~--~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+..+ +...+.+.++..++. ++.....||++
T Consensus 160 ~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 160 VPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 65443 333444333333333 33334457764
No 108
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.1e-09 Score=106.57 Aligned_cols=318 Identities=13% Similarity=0.067 Sum_probs=162.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHH-HHhhcc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA-FLGFQP 82 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lp 82 (369)
+.|+|.+ ....+.+..++++| |+.+.++...+..+|..+-+.+.-.+.+.+|||..+.+.+...+-... ....-|
T Consensus 144 i~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3466665 22334456777665 899999999999999988887777777789999988776655544333 333445
Q ss_pred CChhhHhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCC---CCCCCcccccccccCCCCCccCCCchhhHH---
Q 017592 83 ESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPT---GERAPPELVHLLSSNGGNKTTEGKSGLSLF--- 156 (369)
Q Consensus 83 ESP~~l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (369)
.+|+-.-. .++..+. .....+......+.+...+ ..+.....++..++.+++.. ........
T Consensus 223 ~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 290 (509)
T KOG2504|consen 223 LSPPKKPN---EEKDLRN-------SAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWR--NSPLQAFLSML 290 (509)
T ss_pred CCcCCCch---hhhhhcc-------ccccccccccccccccccCCCCCCcccccchhhhhhCCcccc--ccchhhhhhhh
Confidence 44432211 1111110 0000000000000000000 00000000000110000000 00000111
Q ss_pred -HHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHH
Q 017592 157 -LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAIL 235 (369)
Q Consensus 157 -~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l 235 (369)
.++++. +..+...+....+.+.|+...++.|...... +..+........+.++..++|-++.|++
T Consensus 291 d~~ll~~---~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~-----------g~~~~~aa~l~Siigi~~i~gRi~~G~l 356 (509)
T KOG2504|consen 291 DLSLLKD---PKFLLLALSNLFAYLGFNVPFVYLPSYAKSL-----------GLSSNDAAFLLSIIGVSDIIGRIILGLL 356 (509)
T ss_pred hHHHHcC---chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCChhhhHHHHHHHHHhhhhhhhhhhhh
Confidence 123322 1122222333345556666666666554211 1122222333456678889999999999
Q ss_pred Hhhhchh--HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHH
Q 017592 236 VDTAGRK--LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIG 313 (369)
Q Consensus 236 ~dr~GRR--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~ 313 (369)
.|+-..| .+...+.+++++..+.+....+............++.....+....+..|+.+++.=+.+.|+...+.-++
T Consensus 357 aD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~ 436 (509)
T KOG2504|consen 357 ADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIG 436 (509)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHH
Confidence 9998743 34445555555554333332222111111111112222233455679999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhchhh-HHHHHHHHHHHHHHHHHHhc
Q 017592 314 GMVCPLVAVALVANCHQM-TAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 314 ~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 351 (369)
..++|-+...+.+..+.+ ..+...+++.+++++..++.
T Consensus 437 ~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 437 ALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 999987877776665533 34555566666665554443
No 109
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.15 E-value=3.1e-09 Score=101.90 Aligned_cols=119 Identities=17% Similarity=0.112 Sum_probs=81.5
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..+...++.++.+.++||+|||+++..+.+..++..+......+.+...+.-++..+.....++....+.+|.+|.+
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~ 138 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH 138 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh
Confidence 34455677888899999999999999998877666555444333222222222223333333334556778899999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVL 336 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~ 336 (369)
.|+++.++......++.+++|.+.+.+.+..++...+++
T Consensus 139 ~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 139 LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 999999998887788888888877766665555444444
No 110
>PRK03699 putative transporter; Provisional
Probab=99.15 E-value=8.3e-09 Score=98.05 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=83.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....++..++.++.+.++||+|||+.+..+.++.++..+......+.+......+....+.....+....+.+|.+|.+.
T Consensus 49 s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~ 128 (394)
T PRK03699 49 TFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch
Confidence 34456677888999999999999999887766555544433333222222222222222222233456778899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHH
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVAN-CHQMTAVVLLVVVIVTSILS 347 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~ 347 (369)
|+++.++.+....+++.++|.+...+... .++...+...+++.++..++
T Consensus 129 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 129 RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 99999988877778888888877766543 34455666656555544433
No 111
>PRK03545 putative arabinose transporter; Provisional
Probab=99.14 E-value=7.6e-09 Score=98.13 Aligned_cols=137 Identities=8% Similarity=-0.048 Sum_probs=90.2
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
...+...++.+..+.++||+|||+++..+..+.++..+......+.+...+.-+.........++....+.+|.+|.+.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33445566777889999999999999887666555444433333222222222222222222234566788999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+++.|+......++..++|.+...+.+..++...+.+.+++.++..+..+...||.+
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999988888999999988877766656666777777666655555445456543
No 112
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.11 E-value=6.6e-09 Score=100.88 Aligned_cols=112 Identities=16% Similarity=0.131 Sum_probs=74.3
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh--h-c-------cchhHHHHHHHHHHHHHhhhhHHHH
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV--T-Y-------QSNILTTGLLFGARMCVMGAFTVSL 287 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~--~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (369)
....+++.+++..+.+.+.+|++.|+++.++.++.++...... . . .+............+.....+....
T Consensus 294 ~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~ 373 (468)
T TIGR00788 294 KVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFL 373 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHH
Confidence 3455677888888999999999999998887766555432211 0 0 0111111111111122222234568
Q ss_pred HhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 017592 288 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 329 (369)
Q Consensus 288 ~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~ 329 (369)
.++.++-|.+.+++..++...+..++..+++.+...+.+..+
T Consensus 374 ~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 374 VLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999987777666544
No 113
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.09 E-value=2.1e-08 Score=93.58 Aligned_cols=137 Identities=13% Similarity=-0.032 Sum_probs=88.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc-----chhHHHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-----SNILTTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.+..+...++.++.+.++||+|||+++..+..+.++......... +.+......+...++.....+....+.+|.
T Consensus 41 ~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 120 (365)
T TIGR00900 41 LAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDL 120 (365)
T ss_pred HHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444566777888999999999999999877665444333322211 222222222222232333345678899999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhc-cCcC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI-PFET 355 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~-~pET 355 (369)
+|.+.|++..|+.+....++.+++|.+...+.+..++...+++.++..+++.+....+ .||.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 121 VPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 9999999999999999999999999888877766555555555555444444443333 3444
No 114
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.09 E-value=1.5e-08 Score=98.10 Aligned_cols=139 Identities=12% Similarity=0.003 Sum_probs=82.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc----chhHHHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ----SNILTTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.....+...++.++.+.++||+|||+++..+.++.++..+...... +......+.++..++....++.......|.
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 3455566778899999999999999998887766555444433211 111112222222222222334455677899
Q ss_pred ccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 294 YPTSVRSTGAGAANAMGRIGG-MVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
||++.|+++.|+.+....+++ +.+|.....+....++...+++.+++.++..++.+++.||+.
T Consensus 149 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 WSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred CChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 999999999999777777765 445543322222223444566656655554455555556653
No 115
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=7e-09 Score=97.70 Aligned_cols=139 Identities=16% Similarity=0.049 Sum_probs=95.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..++..++.++.+.++||+|||+.+..+.++.++.........+........+...++..........+..|.+|.+.
T Consensus 33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34556677888999999999999999988776655554444333222222222232223333334566788999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
|+++.++.+....++..++|.+...+.+..++...+.+.+.+.++..+...+..||++.
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999899999999888877776555556666666666655555555677643
No 116
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.07 E-value=2.8e-08 Score=97.40 Aligned_cols=138 Identities=17% Similarity=0.054 Sum_probs=90.2
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccc-cccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY-PTSV 298 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~v 298 (369)
...+....+.+..|.++||+|||+++..+.++..+..+......+.+...+.-.+..+......+.......+.+ |.+.
T Consensus 49 ~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~ 128 (495)
T PRK14995 49 IYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ 128 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 334555667788999999999999998877666555444443333222222212222222222333444555665 6799
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
|+++.|+......++..++|.+...+.+..++...+++...+.++..++.+++.||.++
T Consensus 129 r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 129 RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999888777666666666666666655555566677544
No 117
>PRK09669 putative symporter YagG; Provisional
Probab=99.07 E-value=6.8e-08 Score=93.33 Aligned_cols=106 Identities=10% Similarity=-0.036 Sum_probs=65.3
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh-cc-chhHHHHHHHHHHHHHhhhhHHHHHhhcccccc---
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT--- 296 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt--- 296 (369)
.+..+++.++.+.++||+|||+.+..+..+.++....+.. .. +.+...+...+..+.........+...+|..+.
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3556677788899999999999987765544332222222 22 222222222233333344456788999998863
Q ss_pred ----cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017592 297 ----SVRSTGAGAANAMGRIGGMVCPLVAVALVAN 327 (369)
Q Consensus 297 ----~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~ 327 (369)
+..+...|+.+.+.+++..+++.+...+++.
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334456666777789999998887776653
No 118
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.06 E-value=2.5e-08 Score=94.64 Aligned_cols=140 Identities=14% Similarity=0.011 Sum_probs=87.4
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....+...++.++.+.++||+|||+.+..+.....+..+......+........+...++..........+..|.+|.+
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 34455667788899999999999999988776655544433333222222112112222211122334566788999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
.|+.+.++.+....++..++|.+...+.+..++...+.+.++..++..+...++.||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999988887777777888888887766665555556666555554444444455677653
No 119
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=1.9e-09 Score=101.10 Aligned_cols=139 Identities=14% Similarity=0.050 Sum_probs=90.0
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..+...++.++.+.++||+|||+++..+.++.++..+......+.+...+..++..++.....+....+.+|.+|.+
T Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 115 (379)
T TIGR00881 36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115 (379)
T ss_pred HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh
Confidence 34556677788899999999999999998877665555444333222222222222222222233456788999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCP-LVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p-~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.|+++.++.+....++..++| .....+....++...+.+.+++.++..+..+++.||++
T Consensus 116 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 116 ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 999999999988889998888 45444444444445566556555554455555555543
No 120
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.05 E-value=1.9e-08 Score=97.00 Aligned_cols=139 Identities=17% Similarity=0.074 Sum_probs=86.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc---cchhH-HHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY---QSNIL-TTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
..+..++..++.++.+.++||+|||+.+..+.++.++..+..... .+... .....++..++....++.......|.
T Consensus 67 ~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~ 146 (438)
T TIGR00712 67 LSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHW 146 (438)
T ss_pred HHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 345556777888999999999999998887665555444333221 11111 11111222222222334556677899
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA-NCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
||.+.|+++.|+.+....+++.++|.+...... ..++...+++.+++.++..+..+++.||++
T Consensus 147 ~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 147 WSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred cCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 999999999999888888888888766554333 233445666666666665555555556653
No 121
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.03 E-value=2.6e-08 Score=94.82 Aligned_cols=135 Identities=16% Similarity=0.054 Sum_probs=88.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+..+...++.++.+.++||+|||+.+..+....++..+......+.+......++..+. .+..+....+..|.+|.+.|
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 140 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGFVPNANALIATQVPRNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhhh
Confidence 44456677788899999999999998876655444433333222222111111222221 22334455677899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+++.|+.+....++.+++|.+...+.+..++...+.+.+++.++..+...++.||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999998888889999998888776655555566666666666555555555554
No 122
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.02 E-value=3.1e-08 Score=92.82 Aligned_cols=108 Identities=20% Similarity=0.245 Sum_probs=71.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
..+..+...++.++.+.++||+|||+.+..+.++.++..+...... +.+.....-++..+. .+.+.....+.+|.+|.
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 121 (366)
T TIGR00886 43 VAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPK 121 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCH
Confidence 3455667788899999999999999998887766655544433322 222111111221221 23344566788999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.|+++.++......++..+++.+.+.+..
T Consensus 122 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 122 KIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999888777777777766655443
No 123
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.02 E-value=3.4e-08 Score=93.42 Aligned_cols=138 Identities=10% Similarity=0.039 Sum_probs=91.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....++..++.++.+.++||+|||+++..+..+.++..+......+.+...+.-+...++.....+....+..|.+|.+.
T Consensus 45 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 124 (382)
T PRK10091 45 SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH
Confidence 44566778889999999999999999988777666555444433332222222222222222223455677889999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|++..++......++..++|.+...+.+..++...+.+.+...++..+..++..||.+
T Consensus 125 ~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 125 VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999998887778888888877776666555556666666655555555555567764
No 124
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.02 E-value=1e-07 Score=92.86 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=66.3
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---h-ccc-hhHHHHHHHHHHHHHhhhhHHHHHhhccc-
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---T-YQS-NILTTGLLFGARMCVMGAFTVSLIYAAEI- 293 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El- 293 (369)
+.++..+++.++.+.++||+|||+.+..+..+..+..+... . ... .+...+...+..+.....+...+.+.+|.
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34466778888899999999999998766554333222211 1 111 12222222222233334456778889999
Q ss_pred ----ccccchhhhHH--HHHHHHHHHHHHHHHHHHHHHh
Q 017592 294 ----YPTSVRSTGAG--AANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 294 ----fPt~vR~~~~g--~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+++..|..|.. ....+.+++..+++.+.+.+++
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777754 4455667888888888777664
No 125
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.01 E-value=2.8e-08 Score=93.46 Aligned_cols=136 Identities=10% Similarity=-0.056 Sum_probs=87.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
...++..++.+..|+++||+|||+++..................+.......-++.... .+.....+...+|.+|.+.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g-~~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG-QPFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH-hHHHHHHHHHHHHHcCHHHH
Confidence 33456677888899999999999987654433322221111111211111111222221 12233445566899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+++.++......++..+++.+.+.+.+..++...+++.+++.++..++.+++.||.+
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999889999999988888777666666677767776666666666667754
No 126
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.00 E-value=3.7e-08 Score=95.87 Aligned_cols=171 Identities=15% Similarity=0.027 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh-hchhHHHHH
Q 017592 169 ILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSITI 247 (369)
Q Consensus 169 ~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr-~GRR~~~~~ 247 (369)
..++...+...+.||+..-+.+.+..... ..+.+....-.......+...++.++.|+++|| +|||+++..
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~--------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQA--------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 33444455677888887766665432100 011121122222334456678888999999999 899999988
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc---hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 248 MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV---RSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v---R~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
+.++.++..+......+.........+...+.....+....+.+|.+|.+. |+++.++.+...++|++++|.+.+++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 777665554444332222211111112222111223456678889999864 89999999999999999999998888
Q ss_pred HhhchhhHHHHHHHHHHHHHHHH
Q 017592 325 VANCHQMTAVVLLVVVIVTSILS 347 (369)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~ 347 (369)
.+..++...+...++..+++.+.
T Consensus 165 ~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 165 AENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHhcChHHHHHHHHHHHHHHHHH
Confidence 77655555555555444444333
No 127
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=7e-08 Score=94.74 Aligned_cols=107 Identities=19% Similarity=0.161 Sum_probs=73.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccc--h----hHHHHHHHHHHHHHhhhhHHHHHhhc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS--N----ILTTGLLFGARMCVMGAFTVSLIYAA 291 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (369)
.....++.+++.++.+.++||+|||+.+..+.++..+..+......+ . ....+.-+...++..+.++....+.+
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34556678899999999999999999987766554444333222111 1 11112223333334445577889999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 292 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 292 ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
|.+|++.|+++.++.+....++..+++.+...+
T Consensus 142 e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 142 EFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888877665443
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.98 E-value=3.2e-08 Score=91.56 Aligned_cols=131 Identities=22% Similarity=0.137 Sum_probs=89.0
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....+...++.++.+.++||+|||+.+..+..+..+..+......+............+......+....+.+|.+|.+
T Consensus 40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 119 (352)
T cd06174 40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK 119 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc
Confidence 34556677888999999999999999888777666655544443322222222222222222233466788999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSV 348 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 348 (369)
.|++..++.+....++..++|.+...+.+..+....+.+.+.+.++..+..
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 120 ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888877765544445555555544444333
No 129
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=1.3e-07 Score=90.52 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=85.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc-----cchhHHHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-----QSNILTTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.+..+...++.+..+.++||+|.|+++..+.++.++..+...+. .+.....++-++..+. .+.++......++.
T Consensus 77 ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~w 155 (462)
T PRK15034 77 ALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFF 155 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHH
Confidence 34455566666778999999999998888776655544443321 1211222222222222 33456677889999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHH-----hh-------------chhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALV-----AN-------------CHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~-----~~-------------~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
||.+.|+++.|+....+.++..+++++.|.+. .. .+.....++++...++..++.++++++.
T Consensus 156 fp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 156 FPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred CCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999998888888877776665533 11 1123344566666666666665555443
No 130
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.97 E-value=9.8e-08 Score=90.92 Aligned_cols=133 Identities=8% Similarity=-0.082 Sum_probs=86.1
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhh
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 301 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 301 (369)
.+......++.+.++||+|||+++..+..+.++..+......+.+......+...+......+....+..|.+|.+.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34455556789999999999999988777666555444433332222222222222111223445677899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 302 GAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 302 ~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+.|+......++..++|.+...+. ..++...+.+.+++.++..++..++.||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999998888776 44444555555555555444444444664
No 131
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.97 E-value=6.4e-07 Score=87.25 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=53.3
Q ss_pred eeeccCc---chhhHhHhhhcCCCc---chhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSN---RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 77 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~---Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 77 (369)
+.|+|.+ +...++++|..|++. |+...++.....++|.+++..+...+.+..+||..|.+.++..++..+.
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 4456554 566788999998764 8888899999999999998877766666679999998877644444333
No 132
>PRK11043 putative transporter; Provisional
Probab=98.96 E-value=1e-07 Score=90.63 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=87.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..+...++.++.+.++||+|||+++..+..+..+..+......+........+...+...........+..|.+|.+.
T Consensus 48 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 127 (401)
T PRK11043 48 SLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK 127 (401)
T ss_pred HHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH
Confidence 34456677889999999999999999987765555444333332222211111122112111222334567889999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCc
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 354 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pE 354 (369)
|....+.......+++.++|.+...+.+..++...+++.+.+.++..+..++++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 128 ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99888888888888888999888877776665556666666665555555455444
No 133
>PRK11462 putative transporter; Provisional
Probab=98.95 E-value=3.5e-07 Score=88.72 Aligned_cols=107 Identities=14% Similarity=0.054 Sum_probs=59.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh-hccch-hHHHHHHHHHHHHHhhhhHHHHHhhccccc--
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV-TYQSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYP-- 295 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-- 295 (369)
...+..+++.++++.++||+|||+.+.....+.++..+.+. ..... .....+.++..+.......+.|.+.+|.-.
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~ 350 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYG 350 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 44556677888999999999999887644332222222222 22221 111222222222222223445666666544
Q ss_pred ---ccchhhhHHHHH--HHHHHHHHHHHHHHHHHHh
Q 017592 296 ---TSVRSTGAGAAN--AMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 296 ---t~vR~~~~g~~~--~~~~i~~~~~p~~~~~l~~ 326 (369)
+..|..|..++. ...+++..+++.+.+.+++
T Consensus 351 e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 351 EWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777765444 6667888888877766554
No 134
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.95 E-value=2.9e-08 Score=92.90 Aligned_cols=134 Identities=13% Similarity=0.035 Sum_probs=80.7
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..++..++.+..+.++||+|||+.+..+.++.++..+......+.+..........++....+........|.+| +
T Consensus 44 ~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~ 122 (377)
T TIGR00890 44 FTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-D 122 (377)
T ss_pred HHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-c
Confidence 345566778888999999999999999988766655544433332222222222222222222233445556778887 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
.|+++.++......++..+++.....+.+..++...+.+.++..++..+..+++.
T Consensus 123 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 123 KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhe
Confidence 6999999888777777766544444444444445566666666655555554444
No 135
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.95 E-value=1.8e-07 Score=89.91 Aligned_cols=240 Identities=19% Similarity=0.140 Sum_probs=133.5
Q ss_pred hHhHhhhcC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhc----cC---CCchhhHhhhhHHHHHHHH-HHhhccCChhh
Q 017592 17 LSWFLEFVP-PSNRGMWMVIFSSFWTIGSVSEAIGAWIIM----PR---LDWRWLLGLSSIPSFILLA-FLGFQPESPRY 87 (369)
Q Consensus 17 ~~y~~E~~p-~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~----~~---~~WR~~~~~~~ip~~i~~~-~~~~lpESP~~ 87 (369)
.++..|.++ +++|.+..+.-+.+..+|.++.+.+...+. .. .+|+....+.++..++..+ ..+..+|
T Consensus 125 ~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke---- 200 (428)
T PF13347_consen 125 NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE---- 200 (428)
T ss_pred hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee----
Confidence 357789998 578999999999998898875554433321 11 2799998887777666544 4455666
Q ss_pred HhhcCChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhH
Q 017592 88 LCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLART 167 (369)
Q Consensus 88 l~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 167 (369)
.+.+.++. ++ +.+.+..++.+++++..+.
T Consensus 201 --~~~~~~~~----------------------------~~---------------------~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 201 --RSVEVTEQ----------------------------EK---------------------KISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred --cccccccc----------------------------cc---------------------ccccccchhhhcccchHHH
Confidence 00000000 00 0000113445555444443
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHH
Q 017592 168 TILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSIT 246 (369)
Q Consensus 168 ~~~~~~~-~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~ 246 (369)
.+...++ ++.+....-...++..+... ..+.. .....+..+..+++.++.+.++||+|||+.+.
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~--------------~~~~~-~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~ 294 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLG--------------NEGLI-SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI 294 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhc--------------Cchhh-HHHHHHHHHHHHHHHHHHHHHHHHccceeehh
Confidence 3333222 22222111111111111111 01111 11223456677888889999999999999998
Q ss_pred HHHHHHHHHHHHHhhc--cchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc-----c--hhhhHHHHHHHHHHHHHHH
Q 017592 247 IMFTLSCLFLLPLVTY--QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS-----V--RSTGAGAANAMGRIGGMVC 317 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~-----v--R~~~~g~~~~~~~i~~~~~ 317 (369)
.+..+.++..+..... .+.+...+............+...+.+.+|+.+.+ . .++-.|+.+...+++..++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 8877766655544432 23333333334444444445567889999998742 2 3555666677778888888
Q ss_pred HHHHHHHHh
Q 017592 318 PLVAVALVA 326 (369)
Q Consensus 318 p~~~~~l~~ 326 (369)
+.+...+++
T Consensus 375 ~~i~g~~l~ 383 (428)
T PF13347_consen 375 GAIVGLLLA 383 (428)
T ss_pred HHHHHHHHH
Confidence 877766654
No 136
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.94 E-value=2e-09 Score=100.01 Aligned_cols=79 Identities=19% Similarity=0.190 Sum_probs=61.5
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCC-chhhHhhhhHHHHHHHH-HHhhc
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-WRWLLGLSSIPSFILLA-FLGFQ 81 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~-~~~~l 81 (369)
+.|+|-. |+..+.++..+|.++|+++.++++...++|..++.+.+..+.+..+ ||+.|.+.++..++..+ .+++.
T Consensus 130 ~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 130 FVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred HhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 4477763 7778899999999999999999999999998887665555444444 99999999988877654 45567
Q ss_pred cCCh
Q 017592 82 PESP 85 (369)
Q Consensus 82 pESP 85 (369)
+|-+
T Consensus 210 ~eP~ 213 (493)
T KOG1330|consen 210 REPE 213 (493)
T ss_pred cCcc
Confidence 7643
No 137
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=2.1e-06 Score=81.44 Aligned_cols=137 Identities=15% Similarity=0.201 Sum_probs=86.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc-cchhHHHHHHHHH----HHHHhhhhHHHHHhhccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-QSNILTTGLLFGA----RMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~El 293 (369)
.+..+.+++...+.+.+..|+|-|++++.+.+..++=....... .+.+....+.... .......+.....|..|.
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 35567888999999999999999999988776655422222222 2222222221111 111122345567899999
Q ss_pred ccccchhhhHHHHHHHHH-HHHHHHHHHHHHHHhhchhhH------HHHHHHHHHHHHHHHHHhccCcC
Q 017592 294 YPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVANCHQMT------AVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~-i~~~~~p~~~~~l~~~~~~~~------~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.|.+.|+++.++-+.+.. +++.++.++.+++.+..+... .+.+.+++.++..++.+++.+|+
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999888764 888999999888887654222 22334444444444444444444
No 138
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.93 E-value=4.3e-07 Score=84.00 Aligned_cols=147 Identities=17% Similarity=0.186 Sum_probs=101.8
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhc
Q 017592 212 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAA 291 (369)
Q Consensus 212 ~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (369)
.+..+..+..++..++|+++.+++.||+|-|+++..+.++..+..+...+.......+.+....+.+..+.++..-.|.+
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~ 367 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLA 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 45566677888999999999999999999999888776554444333333333333334434444455677888999999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHhccCcCCCCC
Q 017592 292 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMT-AVVLLVVVIVTSILSVMLIPFETKGQE 359 (369)
Q Consensus 292 ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~pETkg~~ 359 (369)
++.|.+.-++-+|+-+..+|..++++|+....+.+.++..- .+....++.+++. ..+...|+.+.+.
T Consensus 368 ~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~~~~~ 435 (438)
T COG2270 368 RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVPGRRE 435 (438)
T ss_pred HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH-hhEEeecCCCCcc
Confidence 99999999999999999999999999999887777655432 2333334444444 4444444543333
No 139
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.93 E-value=1.2e-06 Score=84.57 Aligned_cols=139 Identities=12% Similarity=-0.011 Sum_probs=80.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHhh-cc---c-----------------hhHHHHHHHHHH
Q 017592 219 FITSLAEIPGLLLAAILVDTAGR-KLSITIMFTLSCLFLLPLVT-YQ---S-----------------NILTTGLLFGAR 276 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GR-R~~~~~~~~~~~~~~~~~~~-~~---~-----------------~~~~~~~~~~~~ 276 (369)
.+.++...+..++-..+++|+|+ |.+...+.++.++++....+ .. + ......+....+
T Consensus 312 ~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G 391 (477)
T TIGR01301 312 MLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILG 391 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhh
Confidence 34444444555566778889985 56667765554444333321 10 0 011112222222
Q ss_pred HHHhhhhHHHHHhhcccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHhcc
Q 017592 277 MCVMGAFTVSLIYAAEIYPTSVR--STGAGAANAMGRIGGMVCPLVAVALVANCH--QMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 277 ~~~~~~~~~~~~~~~ElfPt~vR--~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
+.....++++|.+.++.-|.+.| +.-+|+-|.+--+..++.....+.+....+ ....+.+-++..+++++...+.+
T Consensus 392 i~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 392 IPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 33344567899999999997656 666888887766666666655544333333 22244445566678888888888
Q ss_pred CcCCC
Q 017592 353 FETKG 357 (369)
Q Consensus 353 pETkg 357 (369)
|.++.
T Consensus 472 ~~~~~ 476 (477)
T TIGR01301 472 PRPRV 476 (477)
T ss_pred CCCCC
Confidence 88764
No 140
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.93 E-value=2.2e-07 Score=90.92 Aligned_cols=134 Identities=17% Similarity=0.077 Sum_probs=83.3
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNIL--------TTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.++..+|.++.|.++||+|||+++..+.++.++..+...+..+... ...+=++.++...+.++....+.+|.
T Consensus 67 ~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~ 146 (490)
T PRK10642 67 FLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEY 146 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHh
Confidence 3567788999999999999999999887776666555544322110 11111222333344456778899999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------hhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALV--------ANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+|++.|++..++......+|..+++.+...+. ...++...+++.+...+++ ++....+||+.
T Consensus 147 ~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp 216 (490)
T PRK10642 147 SPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETP 216 (490)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCCh
Confidence 99999999988877665566666654443222 1234445555544433433 33344567863
No 141
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.91 E-value=1.1e-07 Score=92.77 Aligned_cols=163 Identities=11% Similarity=-0.013 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh-hchhH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKL 243 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr-~GRR~ 243 (369)
.|....+....+...++||+...+.+.+... ..+.+...................+++|+++|| +|||+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~----------~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~ 82 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVK----------QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR 82 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH
Confidence 3444445555556778888876555443211 111111121122122222334445689999999 99999
Q ss_pred HHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc--hhhhHHHHHHHHHHHHHHHHHH
Q 017592 244 SITIMFTLSCLFLLPLVTYQS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV--RSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v--R~~~~g~~~~~~~i~~~~~p~~ 320 (369)
++..+.++..+..+......+ .............+.....+....+.+|.||++. |..+.++.+...++++.++|.+
T Consensus 83 ~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 83 TIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 998877665554444333222 1111111111111111223445688999999885 4778888888888999999988
Q ss_pred HHHHHhhchhhHHHHHH
Q 017592 321 AVALVANCHQMTAVVLL 337 (369)
Q Consensus 321 ~~~l~~~~~~~~~~~~~ 337 (369)
.+++.+..++...|++.
T Consensus 163 ~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 163 APVIADKFGYSVTYNLC 179 (489)
T ss_pred HHHHHHhhChHHHHHHH
Confidence 88887766655455443
No 142
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.88 E-value=7.9e-07 Score=80.67 Aligned_cols=259 Identities=17% Similarity=0.149 Sum_probs=148.5
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhhHhhhhHHHHHHHHHHhhccCChhhHhhcC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKG 92 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~-~WR~~~~~~~ip~~i~~~~~~~lpESP~~l~~~g 92 (369)
...+..+=|..|+|. |.+++++.....+|..+++.++..+..+. +||..+.+=++|+++.++++ +|...|.
T Consensus 118 VLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W--lPq~~r~----- 189 (395)
T COG2807 118 VLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW--LPQALRE----- 189 (395)
T ss_pred HhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH--hhhcccc-----
Confidence 344567889999986 78889999999998888877776655444 79999999999999887765 4432211
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccccccccCCCCCCCCCcccccccccCCCCCccCCCchhhHHHHhhcchhhhHHHHHH
Q 017592 93 RTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLW 172 (369)
Q Consensus 93 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 172 (369)
+ ..+. +. +.+ +-..+++++. ..-+.
T Consensus 190 ~-~~~~---------------------------~~--------------------~~~----~~~~vw~~~~---aW~vt 214 (395)
T COG2807 190 Q-AASI---------------------------AT--------------------KLV----SVRKVWRSPL---AWQVT 214 (395)
T ss_pred c-cccc---------------------------cc--------------------ccc----cccccccCch---hHHHH
Confidence 1 0000 00 000 0011222221 22233
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhh-chhHHHHHHHHH
Q 017592 173 LLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-GRKLSITIMFTL 251 (369)
Q Consensus 173 ~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~-GRR~~~~~~~~~ 251 (369)
+.+..++..||.+.-|.|.+....+ .+....-...-+..+.+++..+....+.+|. .||+..+....+
T Consensus 215 LfmGlqS~~~Y~~~~WLP~ili~~G-----------~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 215 LFMGLQSLLYYIVIGWLPAILIDRG-----------LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHcC-----------CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 3344678899999999997753211 1111111222344677888888888999975 555555443322
Q ss_pred HHHHHHHH-hhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 017592 252 SCLFLLPL-VTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS-TGAGAANAMGRIGGMVCPLVAVALVANCH 329 (369)
Q Consensus 252 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~-~~~g~~~~~~~i~~~~~p~~~~~l~~~~~ 329 (369)
+.+-...+ ..+......+ .++..+...+.++..-.....-.....++ .=.|+...+|++-+.++|+.++++-|..+
T Consensus 284 ~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 22211111 1122222222 22223333455666666666666664444 44778899999999999999999888765
Q ss_pred hh-HHHHHHHHHHHHHHHHH
Q 017592 330 QM-TAVVLLVVVIVTSILSV 348 (369)
Q Consensus 330 ~~-~~~~~~~~~~~i~~~~~ 348 (369)
.+ .+...++...+...+.-
T Consensus 362 sw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 362 SWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 43 33444444444443333
No 143
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.87 E-value=5.2e-08 Score=96.09 Aligned_cols=136 Identities=18% Similarity=0.158 Sum_probs=99.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 217 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
...+..++..+|.++.|.++||+|||+++.++.++..++.+...+..+-....++=++.+++..+.....+++.+|++++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~ 202 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP 202 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCc
Confidence 34455667788999999999999999999999888877776655544444444444666666677778899999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+.|+.+..+ ....+.++.+.|....++... +...++..+...++..++ ++++||.+
T Consensus 203 ~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~--Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 203 KQRGLALTL-GGFFFVGGLMLPAGAAYITRD--WRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred chhhHHHHH-HHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 999999999 888888888887777666663 333444444444443333 56667874
No 144
>TIGR00898 2A0119 cation transport protein.
Probab=98.86 E-value=7.3e-08 Score=94.61 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=89.4
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..++..++.++.+.++||+|||+++..+.++.++..+...+..+.....+.-++..+...+.....+.+.+|.+|.+
T Consensus 133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 212 (505)
T TIGR00898 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK 212 (505)
T ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChh
Confidence 34556677888999999999999999998877766655544444333222222233333333444667889999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.|+.+.++......+|.+++|.+...+.+ +...+++.++..++..+.. ++.||+
T Consensus 213 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 213 QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 99999998876666788888876543332 3345555565555554444 445776
No 145
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.86 E-value=8.4e-08 Score=93.21 Aligned_cols=136 Identities=13% Similarity=-0.021 Sum_probs=91.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
...++..++.++.+.++||+|||+.+..+.++.++..+.... ..+.....+.-+...+.....++....+.+|.+|.+
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 334567888899999999999999998877665554433221 111111122222222333334556788999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANC-HQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.|+++.|+......++.+++|.+...+.+.. ++..++++.++..++..++.++++||.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998888776653 555567766666665555555555543
No 146
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.85 E-value=5e-07 Score=86.95 Aligned_cols=134 Identities=22% Similarity=0.128 Sum_probs=79.7
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccc-hh-------HHHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS-NI-------LTTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.++..+|.++.|.++||+|||+.+..+.+..++..+...+..+ .. ....+=++..+...+.++....+.+|.
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 152 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEV 152 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHh
Confidence 3445588899999999999999998877766655544433211 10 011111222233334466788999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------hhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALV--------ANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+|++.|++..++.......+.++++.+...+. ...++..+|++.++..++. ++....+||++
T Consensus 153 ~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~ 222 (432)
T PRK10406 153 AVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETS 222 (432)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 99999999888766555555555554433222 1234445565544444443 23334457764
No 147
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.84 E-value=3.1e-07 Score=87.90 Aligned_cols=138 Identities=15% Similarity=0.053 Sum_probs=83.9
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---h-ccch-hHHHHHHHHHHHHHhhhhHHHHHhhcc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---T-YQSN-ILTTGLLFGARMCVMGAFTVSLIYAAE 292 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E 292 (369)
.....+..+++.++.+.++||+|||+++..+..+.++....+. . ..+. .......+...++.....+....+.+|
T Consensus 58 ~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 137 (417)
T PRK10489 58 VTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPA 137 (417)
T ss_pred HHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3445566778888999999999999988765544433222211 1 1122 111111122222211223445678899
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 293 IYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 293 lfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+|.+.|+++.++......++..++|.+...+.+..++...+.+.++..+++.+... ..||++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 200 (417)
T PRK10489 138 LVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPALP 200 (417)
T ss_pred ccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence 999999999999988888899999998887776654444445544444444444433 345653
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.84 E-value=1.4e-07 Score=91.25 Aligned_cols=138 Identities=18% Similarity=0.038 Sum_probs=86.3
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh-ccch--hHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQSN--ILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
..+..++..++.++.+.++||+|||++++.+.++..+....... .... +...+.-++..++....+.....+.+|.+
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 34556677888999999999999999988766554444333322 1111 12222222222333334556788999999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHH---HHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLVA---VALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~~---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|.+.|+++.++.+....+|.++++.+. ..+....++...+.+.+...++.. +..++.||+.
T Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 157 PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 999999999999888889999998876 322233334445555444344433 3344557764
No 149
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.84 E-value=2.1e-07 Score=90.59 Aligned_cols=138 Identities=17% Similarity=0.039 Sum_probs=84.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc---------cchhHHHH---HHHHHHHHHhhhhHH
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY---------QSNILTTG---LLFGARMCVMGAFTV 285 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~ 285 (369)
.....++..++.++.+.++||+|||+++..+..+.++..+..... .+...... .=++..++..+.++.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 345567788899999999999999999987665544333222210 11111111 112222333344567
Q ss_pred HHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------hhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 286 SLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV--------ANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 286 ~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
...+.+|.+|.+.|+++.++......++.++++.....+. +..++...+++.++..++..+. .++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 7889999999999999999988777777777765544332 2233444555555555554443 44567874
No 150
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.84 E-value=3.8e-07 Score=86.69 Aligned_cols=133 Identities=11% Similarity=-0.048 Sum_probs=84.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
....+...+..++.|.++||+|||+++..+..+..+..+......+. ...-+..........+....+.+|++|.+.
T Consensus 45 ~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~ 121 (393)
T PRK11195 45 MFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK 121 (393)
T ss_pred HHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 34445667778899999999999999988766544433322221111 111122223333345667889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|+++.|+......++..++|.+...+.+.. ...++.+.+.+.+++ .+..+..||.+
T Consensus 122 ~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 122 LVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 999999999888889999999888776643 222333333333333 23334557754
No 151
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=6e-07 Score=86.49 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=63.7
Q ss_pred hhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 225 EIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNIL--------TTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 225 ~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
..+|.++.+.++||+|||+.++.+..+.++......+..+... ..+.-++..+.....++....+.+|.+|+
T Consensus 69 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 69 RPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 3467889999999999999998877665555444443222110 01111111121222344567899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
+.|+++.++......++..+++.+...
T Consensus 149 ~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 149 GRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888777766666655443
No 152
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.82 E-value=1.1e-06 Score=86.48 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=57.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHH-HHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSIT-IMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
..+.+...|.++.+.+..++||-|..+ .+......+..++.. ..+....+.+.++..++..+.-.+..+...-.-|.
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~ 436 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPD 436 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCc
Confidence 445566677788888999888877664 333333222223222 22222233444444444333334556666667788
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHH
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.-+++.|+...+-.+|+.++.-+
T Consensus 437 ~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 437 EDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHH
Confidence 888888777776666666555433
No 153
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.81 E-value=3e-07 Score=87.41 Aligned_cols=118 Identities=14% Similarity=-0.107 Sum_probs=72.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--ccchh------HHHHHHHHHHHHHhhhhHHHHHhh
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNI------LTTGLLFGARMCVMGAFTVSLIYA 290 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 290 (369)
....+...++.++.|.++||+|||+++..+.++.++....... ..+.+ .....-++...+..........+.
T Consensus 58 ~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 137 (399)
T PRK05122 58 SLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWG 137 (399)
T ss_pred HHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHH
Confidence 4445666778889999999999999998876654433222111 11110 111111122222222233456677
Q ss_pred cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 017592 291 AEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVL 336 (369)
Q Consensus 291 ~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~ 336 (369)
.|.+|.+.|+++.++......++..++|.+...+.+..++...+++
T Consensus 138 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 183 (399)
T PRK05122 138 IGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLL 183 (399)
T ss_pred HhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 8999999999999987777677778888887776665554433333
No 154
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.81 E-value=7.3e-07 Score=84.30 Aligned_cols=109 Identities=13% Similarity=-0.053 Sum_probs=71.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.....++..++.++.+.++||+|||+.+..+.++.++.........+.+......+...+......+.......+..|.+
T Consensus 47 ~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (381)
T PRK03633 47 SSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR 126 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 34455677888899999999999999988876665554443333322222222222222222222233344556888999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
.|+++.|+......++..++|.+...+..
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999988888999999988776544
No 155
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.81 E-value=3.2e-07 Score=88.96 Aligned_cols=128 Identities=15% Similarity=0.032 Sum_probs=81.3
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHhhhhHHHHHhhcccccccchhh
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLL-FGARMCVMGAFTVSLIYAAEIYPTSVRST 301 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 301 (369)
+...++.++.+.++||+|||++++.+.++.++..+......+.+...... .+..+.....+.....+..+.|| +.|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 34456677899999999999998877655554444333322221111111 11111111122345567788887 78999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhc
Q 017592 302 GAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 302 ~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
+.|+.+....+++.++|.+.+.+.+..++..++++.+++.+++.+..+++
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988888888888887777776666667777777665554444343
No 156
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.2e-07 Score=87.61 Aligned_cols=140 Identities=15% Similarity=0.093 Sum_probs=105.2
Q ss_pred HHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchh
Q 017592 221 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS 300 (369)
Q Consensus 221 ~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 300 (369)
..+..-++-.+.|.++||.+.|..+..++++++++++...+..+-.+..++..+...+....++.+...++--||.+.|+
T Consensus 73 f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG 152 (448)
T COG2271 73 FSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERG 152 (448)
T ss_pred HHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccC
Confidence 34556677888999999999999999999999988877766544444445555555555556788999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHH--HHHHhhchhhHHHHHHHHHHHHHHHHHHhcc---CcCCCCCC
Q 017592 301 TGAGAANAMGRIGGMVCPLVA--VALVANCHQMTAVVLLVVVIVTSILSVMLIP---FETKGQEL 360 (369)
Q Consensus 301 ~~~g~~~~~~~i~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~---pETkg~~l 360 (369)
+..|+=+...++|+.+.|.+. ..+..+.++...+++=++++++.+++.++.. ||+.|.+-
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ 217 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP 217 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Confidence 999999999999998888777 5555555555566666776666666666554 66667654
No 157
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.80 E-value=3.4e-08 Score=89.71 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=78.3
Q ss_pred HHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHhhhhHHHHHhhcccccccch
Q 017592 221 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLL-FGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 221 ~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
.++.+++.....|.++||.|||+++..+.+..++.........+ ....++. +..+ +..+..+++.++.+|+++.+.|
T Consensus 77 F~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~-F~afv~aR~l~G-i~kgnl~v~rAiisdV~sek~r 154 (451)
T KOG2615|consen 77 FSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN-FAAFVLARFLGG-IFKGNLSVIRAIISDVVSEKYR 154 (451)
T ss_pred HHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhh-hccCchHHHHHHHHhhcChhhc
Confidence 35678899999999999999999999988877776655444322 1111111 1221 2345567899999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.+++.......+|-+++|.+..++..
T Consensus 155 ~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 155 PLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999888888899999998887655
No 158
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.80 E-value=6.1e-07 Score=85.53 Aligned_cols=112 Identities=11% Similarity=-0.025 Sum_probs=69.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---hccchhHH-HHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---TYQSNILT-TGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
.....+...++.++.+.++||+|||+++..+..+.++..+... ....+... .........+..........+..+.
T Consensus 54 ~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~ 133 (402)
T TIGR00897 54 FTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYN 133 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHh
Confidence 3455677788899999999999999998877665544432221 11112211 1111111111111222344567789
Q ss_pred ccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHhhch
Q 017592 294 YPTSVRSTGAGAANAMGRIGG-MVCPLVAVALVANCH 329 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~-~~~p~~~~~l~~~~~ 329 (369)
+|++.|+++.|+.+....++. .++|.+...+.+..+
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 134 TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999998888875 567777665555444
No 159
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.79 E-value=1.6e-07 Score=91.44 Aligned_cols=132 Identities=16% Similarity=0.033 Sum_probs=80.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh-----ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-----YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
...++..++.++.|.++||+|||+++..+.++.++..+.... ..+.....++-++..++....++....+.+|.|
T Consensus 72 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (467)
T PRK09556 72 GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT 151 (467)
T ss_pred HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc
Confidence 345566778889999999999999987766555444333221 111111222222222322333456678899999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHHHHHHHHHhc
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC---HQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
|.+.|+++.|+....+.+++.+++.+..++.... ++...+.+.+++.++..++.+++
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998888888888877765544432 12233444455544444444443
No 160
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.79 E-value=1.1e-07 Score=95.49 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=59.1
Q ss_pred eeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCC----------------------Cch
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL----------------------DWR 61 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~----------------------~WR 61 (369)
+.|+|.+ ++..+|+.|+.|+++|+.+.++.+....+|..++.+++..+...+ +||
T Consensus 181 l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 181 LRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred HHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 4478876 456689999999999999999999999999888876654432211 388
Q ss_pred hhHhhhhHHHHHHHHHHhhccCC
Q 017592 62 WLLGLSSIPSFILLAFLGFQPES 84 (369)
Q Consensus 62 ~~~~~~~ip~~i~~~~~~~lpES 84 (369)
..|++.++..++..+..+.+||.
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCccc
Confidence 88988888777766656667764
No 161
>PTZ00207 hypothetical protein; Provisional
Probab=98.78 E-value=3.8e-06 Score=82.95 Aligned_cols=97 Identities=14% Similarity=0.033 Sum_probs=64.4
Q ss_pred eeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhH-HHHHHHHH--Hhhc
Q 017592 8 WERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI-PSFILLAF--LGFQ 81 (369)
Q Consensus 8 ~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~i-p~~i~~~~--~~~l 81 (369)
.|+|.+ +....++.+++| ++||++.++...+..+|..+.+.+...+.. .+|+..|++.++ +.++.++. ....
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 355654 334457789997 678999999999999999765554433322 467776655544 44433333 3357
Q ss_pred cCChhhHhhcCChHHHHHHHHHHHH
Q 017592 82 PESPRYLCLKGRTAEAHRALEKIAQ 106 (369)
Q Consensus 82 pESP~~l~~~g~~~~A~~~l~~~~~ 106 (369)
||+|+|...++|.+|+++.++++++
T Consensus 208 p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (591)
T PTZ00207 208 PPFHLTGYQEKHLDEEEKAQRLMRK 232 (591)
T ss_pred CcchhhcccccCCCHHHHHHHhhhh
Confidence 8899988777777777777555443
No 162
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.78 E-value=7.7e-06 Score=76.96 Aligned_cols=141 Identities=9% Similarity=0.041 Sum_probs=91.1
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..+.+++.+.++.++++|+|-|+.++.+..+.++=........+.+.....=..-..-.....-...-|.++.||++.
T Consensus 266 s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl 345 (412)
T PF01306_consen 266 SVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH
Confidence 34556788889999999999999999988766555433333333332221111000000001112235679999999999
Q ss_pred hhhhHHHHHHHH-HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCC
Q 017592 299 RSTGAGAANAMG-RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQE 359 (369)
Q Consensus 299 R~~~~g~~~~~~-~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~ 359 (369)
.+|...+...++ .++.++.+...+.+.+..+...+|++.+.+.+...++..+.++..|...
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 999999987665 4788888888888888887667888888888777777777765555433
No 163
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.77 E-value=7.7e-07 Score=87.27 Aligned_cols=166 Identities=13% Similarity=-0.041 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhh-hchhHHHH
Q 017592 168 TILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSIT 246 (369)
Q Consensus 168 ~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr-~GRR~~~~ 246 (369)
...++...+...+.||+...+.+.+... ..+.+...................++.|+++|| +|||+.+.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~----------~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVK----------QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 4444455556677788777666644321 011111111111111112222334578999999 59999988
Q ss_pred HHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccccc--hhhhHHHHHHHHHHHHHHHHHHHHH
Q 017592 247 IMFTLSCLFLLPLVTYQSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV--RSTGAGAANAMGRIGGMVCPLVAVA 323 (369)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v--R~~~~g~~~~~~~i~~~~~p~~~~~ 323 (369)
.+.++.++.........+. ............+.....+....+.+|.||.+. |..+.++.+...++++.++|.+.++
T Consensus 93 ~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 7766555443333332111 111111111111111123445678999998753 4457787788889999999999998
Q ss_pred HHhhchhhHHHHHHHHHHHH
Q 017592 324 LVANCHQMTAVVLLVVVIVT 343 (369)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~i 343 (369)
+.+..++...+.+.++..++
T Consensus 173 l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 173 LAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHhhCHHHHHHHHHHHHHH
Confidence 87766655556554443333
No 164
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.76 E-value=1.6e-06 Score=82.96 Aligned_cols=108 Identities=19% Similarity=0.037 Sum_probs=72.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--ccchh-HHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNI-LTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
.....++..++.+..+.++||+|||+.+..+..+.++..+.... ..++. ......++..+...........+..|+.
T Consensus 44 ~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 44 QSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 34555677888889999999999999998877665544333221 11121 1112222222222223344556788899
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
|.+.|++..++.+....+|+.++|.+...+.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877654
No 165
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.76 E-value=1.1e-06 Score=82.46 Aligned_cols=137 Identities=15% Similarity=0.013 Sum_probs=80.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHH-HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITI-MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
...+...+...+.+.++||+|||+.++. +.....+.........+.+.................+....+..|..|.+.
T Consensus 41 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~ 120 (375)
T TIGR00899 41 GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG 120 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc
Confidence 3344566677788999999999887654 333333332222322222211111111111112233445667788888877
Q ss_pred hhhh--HHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 299 RSTG--AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 299 R~~~--~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|+.+ .+.....+.++..++|.+...+.+..++...+++.+.+.++..+..+++.||.+
T Consensus 121 ~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 121 REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7755 466666667888888888777766655556677777766666556555556654
No 166
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.6e-06 Score=80.73 Aligned_cols=135 Identities=13% Similarity=-0.003 Sum_probs=96.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..++..++.++...+.||+.||++++....+..+..+......+-......=++..+.-...+++...+..++-|++.
T Consensus 55 s~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~ 134 (394)
T COG2814 55 TAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK 134 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 45567778888999999999999999988766655555544443222211111122223334557888999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPF 353 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~p 353 (369)
|+++.++...-.-+..+++.=+..++-+..++..+|...+.+.+++.+..+..+|
T Consensus 135 ~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 135 RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999987766777776545566667777788898888888888777777777
No 167
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.76 E-value=1.3e-06 Score=85.69 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=49.8
Q ss_pred eeeccCc---chhhHhHhhhcCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHH
Q 017592 7 FWERRCG---HVFLSWFLEFVPPSN--RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL 74 (369)
Q Consensus 7 ~~G~g~~---~~~~~y~~E~~p~~~--Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 74 (369)
+.|+|.+ +...+++.|+.|+++ |+...+++..+..+|..++..+...+.+..|||..|.+.++..++.
T Consensus 121 l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 121 TIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 3456554 555678899998654 3456677788899999988877766667789999999887654443
No 168
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.76 E-value=1.1e-06 Score=83.57 Aligned_cols=123 Identities=13% Similarity=-0.004 Sum_probs=80.1
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
...++..++.++.+.++||+|||+++..+..+.++..+...+..+.......-++..++..........+..|.|| +.|
T Consensus 52 ~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~ 130 (393)
T PRK09705 52 LPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRT 130 (393)
T ss_pred HHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccc
Confidence 4445667788899999999999999999888777766655543332221121122222222333445667889998 779
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHH
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANC-HQMTAVVLLVVVIVT 343 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i 343 (369)
+++.|+.......+..+++.+.+.+.++. ++...+.++++..++
T Consensus 131 ~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 131 PLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 99999988877788888888877766653 333444444444433
No 169
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.75 E-value=2.5e-06 Score=83.35 Aligned_cols=73 Identities=18% Similarity=0.103 Sum_probs=53.2
Q ss_pred eeeeccCc---chhhHhHhhhcCCC--cchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHH
Q 017592 6 AFWERRCG---HVFLSWFLEFVPPS--NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFL 78 (369)
Q Consensus 6 ~~~G~g~~---~~~~~y~~E~~p~~--~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 78 (369)
++.|+|.+ +...+.++|..|++ +|+...+++...+++|..++..++-++....|||+.|++..+..++.++.+
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~ 190 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVY 190 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHH
Confidence 34466665 56678999999887 457778888899999998887776666667899999988755333333333
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.73 E-value=1.5e-06 Score=85.22 Aligned_cols=137 Identities=18% Similarity=0.079 Sum_probs=88.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---h-c-cchhHHHHHHHHHHHHHhhhhHHHHHhhccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---T-Y-QSNILTTGLLFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 293 (369)
....+-.++..+++|.++||+.||++++.+-.+.++....+. . . .+.+...++.++...+.....+....+.+|+
T Consensus 52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~l 131 (524)
T PF05977_consen 52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPEL 131 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455566678899999999999999887654443322221 1 1 2223333333443333333345567899999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 294 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 294 fPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.|.+.-..+.++.....++..+++|.+.+.++...+....+.+-+++.++.........++.
T Consensus 132 V~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 132 VPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred ccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999998888888999999988877766655566665555555444444444433
No 171
>PRK09952 shikimate transporter; Provisional
Probab=98.69 E-value=3.9e-06 Score=81.00 Aligned_cols=133 Identities=14% Similarity=0.039 Sum_probs=79.5
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchh----H----HHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNI----L----TTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
+...+|.++.|.+.||+|||+.+..+..+.++..+...+..+.. . ...+=++..+...+.++....+.+|.+
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 44667888999999999999999887776666555444422211 0 111112222223334456678999999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHh--------hchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLVAVALVA--------NCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
|.+.|++..+.......++..+++.....+.. ..++..++++.++..++. +.....+||++
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 99999988887776656666666544433321 234444555544443332 23333457764
No 172
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.68 E-value=3.6e-06 Score=82.39 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=83.6
Q ss_pred hHHHHHHHHHhhh-----chhHH-HHHHHHHHHHHHHHHhhcc--chh-HHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 227 PGLLLAAILVDTA-----GRKLS-ITIMFTLSCLFLLPLVTYQ--SNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 227 ~g~i~~~~l~dr~-----GRR~~-~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
.+.++.+.++||+ |||+. +..+.+..++....+.+.. .+. ....+..+..++..........+.+|.+|.+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5678899999999 99986 4454444433333333321 121 1112222223333334456778999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVA-NCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.|+++.++.....+++..+++.....+.+ ..++...+++.++..++..+..++ .||+.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999998888999999888777766 345566677777666665544444 47764
No 173
>PRK12382 putative transporter; Provisional
Probab=98.66 E-value=3.2e-06 Score=80.16 Aligned_cols=111 Identities=14% Similarity=-0.106 Sum_probs=68.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH---Hhh-cc---ch-hHHHHHHHHHHHHHhhhhHHHHHhhc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLP---LVT-YQ---SN-ILTTGLLFGARMCVMGAFTVSLIYAA 291 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~---~~~-~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (369)
...+...++.++.|.++||+|||+++..+.+.+.+..+. ... .. .+ ....+.-+..........+....+..
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 138 (392)
T PRK12382 59 IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGL 138 (392)
T ss_pred HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566777889999999999999988776554433221 111 11 11 11111111111111122234456778
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 017592 292 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 330 (369)
Q Consensus 292 ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~ 330 (369)
|.+|.+.|+++.|+......++..++|.+...+....++
T Consensus 139 ~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 177 (392)
T PRK12382 139 GLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGF 177 (392)
T ss_pred hhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 999999999999998776677888888887766554443
No 174
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.65 E-value=1.7e-06 Score=80.02 Aligned_cols=136 Identities=18% Similarity=0.083 Sum_probs=92.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--ccchh-HHHHHHHHHHHHHhhhhHHHHHhhc
Q 017592 215 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNI-LTTGLLFGARMCVMGAFTVSLIYAA 291 (369)
Q Consensus 215 ~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (369)
.+...+..+.+.+.-+..+++.||+|-|++...+.++..+-.+.... ....+ ....+-.... ...+.+++.-.+.+
T Consensus 52 ~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G-~~GasFav~m~~~s 130 (417)
T COG2223 52 GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG-LAGASFAVGMPNAS 130 (417)
T ss_pred HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh-cccceehccccccc
Confidence 33344555566666778999999999999998887766655544443 22222 1111111111 12234567778999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHhcc
Q 017592 292 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH---QMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 292 ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
+-||++.++++.|+.- .|++|..+..++.|.+....+ +.....++....++..+..++..
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred ccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998 999999999999888777655 55566667776666666666654
No 175
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.65 E-value=2.3e-06 Score=92.44 Aligned_cols=108 Identities=14% Similarity=-0.024 Sum_probs=73.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---hccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
+..+..+++.+++|.++||+|||+++.++.++.++..+... ...+.+...++.++..++.....+..+.+.+|++|.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 44455677788999999999999999877654433322221 112222222222222232233345678899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVAN 327 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~ 327 (369)
+.|+++.|+......++.+++|.+...+...
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888776654
No 176
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.63 E-value=3e-05 Score=71.58 Aligned_cols=121 Identities=10% Similarity=0.075 Sum_probs=77.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
....+..+|-.++..++.|+...+.+.....++.++++......+. .....+++..++....++..+....+..|.+.-
T Consensus 280 ~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~ts 358 (422)
T COG0738 280 FFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHTS 358 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc
Confidence 3445567788888888899988888887766666555554443332 233334444555667788899999999994444
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVT 343 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i 343 (369)
..+..++. +-+|+.+.|++.+++.|..+....+.....++.+
T Consensus 359 ~~s~~l~m--aivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 359 VGSGLLVM--AIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred ccceeeee--heecchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 33333333 3478889999998887776544344433333333
No 177
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.62 E-value=5.3e-06 Score=80.12 Aligned_cols=140 Identities=9% Similarity=-0.038 Sum_probs=80.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHh----hhchhHHHHHHHH-HHHHHHHHHhhccc-------------hhH----HHHHHHH
Q 017592 217 DEFITSLAEIPGLLLAAILVD----TAGRKLSITIMFT-LSCLFLLPLVTYQS-------------NIL----TTGLLFG 274 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~d----r~GRR~~~~~~~~-~~~~~~~~~~~~~~-------------~~~----~~~~~~~ 274 (369)
...+..+..++..++.|.++| |+|||+.++.... ...+.+..+....+ ... ......+
T Consensus 44 i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~l 123 (477)
T TIGR01301 44 IWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWI 123 (477)
T ss_pred HHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHH
Confidence 344556677778889999999 5999999876433 33333222222111 000 0111111
Q ss_pred HHHHHhhhhHHHHHhhcccccccchh--hhHHHHHHHHHHHHHHHHHHHHHHH--hhc-------------hhhHHHHHH
Q 017592 275 ARMCVMGAFTVSLIYAAEIYPTSVRS--TGAGAANAMGRIGGMVCPLVAVALV--ANC-------------HQMTAVVLL 337 (369)
Q Consensus 275 ~~~~~~~~~~~~~~~~~ElfPt~vR~--~~~g~~~~~~~i~~~~~p~~~~~l~--~~~-------------~~~~~~~~~ 337 (369)
..+......+...++.+|+.|.+.|. .+.++......+|+++++.+..... +.. +....|++-
T Consensus 124 ld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~ 203 (477)
T TIGR01301 124 LDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLID 203 (477)
T ss_pred HHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHH
Confidence 22233334456788999999998774 5777777777788888876654321 100 112345555
Q ss_pred HHHHHHHHHHHHhccCcCC
Q 017592 338 VVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 338 ~~~~~i~~~~~~~~~pETk 356 (369)
+++.+++.++..+..+|..
T Consensus 204 a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 204 IILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHeeeeeccC
Confidence 5556666667666667754
No 178
>PRK10133 L-fucose transporter; Provisional
Probab=98.62 E-value=1e-05 Score=78.10 Aligned_cols=149 Identities=15% Similarity=0.019 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHH
Q 017592 165 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 244 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~ 244 (369)
......+..+++...+.........|.+.+. .+.++...-+......++..++.++.+.++||+|||++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-----------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~ 93 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQA-----------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3333444444554445555555556655321 11122222233345567778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHh---hccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 245 ITIMFTLSCLFLLPLV---TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
+..+..+.++..+... ...+........++..+...........+..|..|.+.|....++.+....++..++|.+.
T Consensus 94 l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 94 IITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887765554443321 1122222222223322322333344556667887777777788888888888888888776
Q ss_pred HHH
Q 017592 322 VAL 324 (369)
Q Consensus 322 ~~l 324 (369)
..+
T Consensus 174 ~~l 176 (438)
T PRK10133 174 QSL 176 (438)
T ss_pred HHH
Confidence 543
No 179
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.61 E-value=4.5e-06 Score=90.15 Aligned_cols=136 Identities=13% Similarity=-0.063 Sum_probs=82.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHH---HHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLS---CLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
+..+..++..++.|.++||+|||+++.....+. +..........+.+...++.++...+.....+....+..+++|.
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~ 139 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNK 139 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc
Confidence 344556677888999999999999764322211 11111111112222222333333333333456788899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+.|+.+.|+......++.+++|.+.+.+....++...+ +.++...+.++++.+..|+++
T Consensus 140 ~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 140 DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999998887765544334 333333222333334445554
No 180
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.6e-05 Score=75.72 Aligned_cols=112 Identities=21% Similarity=0.166 Sum_probs=72.3
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHhhhhHHHHHhhcc
Q 017592 215 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVSLIYAAE 292 (369)
Q Consensus 215 ~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 292 (369)
+.......+..+.+.++...+.+|+|||+++..+.++.++..+...+.. +..+..+............+.+.|...+|
T Consensus 275 ~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d 354 (467)
T COG2211 275 YLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVAD 354 (467)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcc
Confidence 3444454556666788899999999999999988776665554444422 22222233333334445556788999888
Q ss_pred c-----ccccchhhhHHHH--HHHHHHHHHHHHHHHHHHHh
Q 017592 293 I-----YPTSVRSTGAGAA--NAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 293 l-----fPt~vR~~~~g~~--~~~~~i~~~~~p~~~~~l~~ 326 (369)
. .-|.+|..|...+ ....+++..++..+.++++.
T Consensus 355 ~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 355 TVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred hhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 4567788775554 45556888777777666554
No 181
>PTZ00207 hypothetical protein; Provisional
Probab=98.54 E-value=1.3e-05 Score=79.21 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc------cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhh
Q 017592 228 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY------QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 301 (369)
Q Consensus 228 g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 301 (369)
..+..|++.||+|||+++.++.++.++..+..... .+.+...+...+........+........+.|| +.|++
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 34568999999999999988776655544433332 111111111122222222223345566788997 78999
Q ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 017592 302 GAGAANAMGRIGGMV-CPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 302 ~~g~~~~~~~i~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 349 (369)
+.|+......+++.+ ++.....+.+. ....+++.++..++..++.+
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~~--~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSDN--TSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHH
Confidence 999999998888865 44444433322 23344555555444333333
No 182
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.52 E-value=5.6e-06 Score=81.47 Aligned_cols=134 Identities=17% Similarity=0.134 Sum_probs=76.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
....+...++..+.|.++|.+|||..++.+.++..+-.+......+ +... .-..+.... .+.........+|+.|.+
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~i-ag~~l~Gvg-aG~~~~~~~~isEl~p~k 162 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFI-AGMVLYGVG-AGVQELAALAISELVPNK 162 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHH-HHHHHHHHh-hHHHHHHHHHHHHhcccc
Confidence 4445667777888999999999999998877665554433332222 2111 111111111 233345677789999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH--HHhccCc
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS--VMLIPFE 354 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~--~~~~~pE 354 (369)
-|..+.++.....-+....+|.+...+....++.+.++++.+...++.+. .++.||.
T Consensus 163 ~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 163 WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99988877665444445566666654433333444555554444333322 3344554
No 183
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.51 E-value=2.3e-06 Score=80.49 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=65.0
Q ss_pred hhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchh----HHHHHHHHH----HHHHhhhhHHHHHhhcccccc
Q 017592 225 EIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNI----LTTGLLFGA----RMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 225 ~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~ElfPt 296 (369)
..++.++.+.++||+|||+.+..+.++.++..+......+.. .....+... .+......+....+.+|.+|.
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP 127 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc
Confidence 356788999999999999999887766555444433322111 000111111 111122234567789999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
+.|++..++......++.++++.+...+
T Consensus 128 ~~r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 128 GKRGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888888888765543
No 184
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.47 E-value=7.7e-06 Score=77.82 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=58.6
Q ss_pred eeeccCc--chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhH---hhhhHHHHHHHHHHhhc
Q 017592 7 FWERRCG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLL---GLSSIPSFILLAFLGFQ 81 (369)
Q Consensus 7 ~~G~g~~--~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~---~~~~ip~~i~~~~~~~l 81 (369)
+.|++.+ .....|+..++|+++|+++.++...+..+|.+++++++.+ ....|||... ++......+.++.-++|
T Consensus 124 llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 124 FYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3466654 4445689999999999999999999999999999888776 4458999864 34444445556666788
Q ss_pred cCChh
Q 017592 82 PESPR 86 (369)
Q Consensus 82 pESP~ 86 (369)
|--+|
T Consensus 203 P~~~~ 207 (511)
T TIGR00806 203 KRPKR 207 (511)
T ss_pred CCCch
Confidence 84444
No 185
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.46 E-value=1.2e-05 Score=75.17 Aligned_cols=128 Identities=20% Similarity=0.168 Sum_probs=78.8
Q ss_pred HHHHHHHHhhh-----chhHHHH-HHHHHHHHHHHHHhhcc--chh-HHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 229 LLLAAILVDTA-----GRKLSIT-IMFTLSCLFLLPLVTYQ--SNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 229 ~i~~~~l~dr~-----GRR~~~~-~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
.++.+.++||+ |||+.++ .+.+..++....+.+.. .+. ....+.+....+..........+.+|.+|.+.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67899999997 8998754 44444444433333321 111 111111122222222234567789999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhch--------hhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCH--------QMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+.+.|+......++.++++.+...+....+ +..++++.+++.++..+...+..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999888888888888888776665544 445666666666665555444456754
No 186
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.46 E-value=9.6e-06 Score=77.72 Aligned_cols=137 Identities=13% Similarity=0.066 Sum_probs=70.7
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh-ccchhHH--HHH-HHHHHHHHhhhhHHHHHhhccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQSNILT--TGL-LFGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~El 293 (369)
..+..+...++.++.|.++||+|||+.+..+..+.++....... ....... ..+ ...........+........+.
T Consensus 52 ~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (420)
T PRK09528 52 FSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAY 131 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhH
Confidence 34556677888899999999999999987654433322211111 0000000 001 1111111111111111111122
Q ss_pred cc--ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 294 YP--TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 294 fP--t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.+ .+.|+...|.....+.++..++|.+...+.+. ++..+++..+++.+++.+..++..||.
T Consensus 132 ~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 132 IERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred HHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccc
Confidence 22 23455567777888888999999888776653 344556666655555555555544443
No 187
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.43 E-value=4.9e-05 Score=72.20 Aligned_cols=132 Identities=14% Similarity=0.011 Sum_probs=72.2
Q ss_pred hhhHHHHHHHHHhhhchhHHHH-HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhh-
Q 017592 225 EIPGLLLAAILVDTAGRKLSIT-IMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG- 302 (369)
Q Consensus 225 ~~~g~i~~~~l~dr~GRR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~- 302 (369)
...+.+..++ +||+|||+.++ .+.+..++.........+......+............+....+..|..|.+-|..+
T Consensus 65 ~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (393)
T PRK15011 65 ILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVM 143 (393)
T ss_pred HHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHH
Confidence 3445555666 99999998754 44333333222222222111111111111111122233445566676666555432
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 303 -AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 303 -~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
.++.+....++.+++|.+...+.+..++..++...+...++..+..+++.||.+.
T Consensus 144 ~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 144 FSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 3566666778899999888877766666666777676666655565555567643
No 188
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=4.9e-06 Score=81.98 Aligned_cols=138 Identities=22% Similarity=0.137 Sum_probs=84.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 217 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
......++..+|.++++.++|++|||+.+..+.+...+-.+......+.....+.=++.++...+...+..+|.+|+-|+
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~ 173 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPA 173 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCCh
Confidence 34455778889999999999999999998876655444333333322222211221222233333345788999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVANC--HQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+.|+.-.+.....-.+|..++ ++..+..... ++...+.+..+.+++..+. .++.||+.
T Consensus 174 ~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 174 HIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 999999998887766655555 4444333321 2333444444555554444 55667773
No 189
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.39 E-value=5.3e-05 Score=72.23 Aligned_cols=103 Identities=15% Similarity=0.054 Sum_probs=73.2
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhh
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 301 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 301 (369)
..+..+..+..++++||+|-|+++..+.+..+++.+...+..+.....++=++.+++-...+ ..+.++...||.+.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHH
Confidence 34567778889999999999999988777666555544442221111122122223333334 77889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 302 GAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 302 ~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
+.|+.+....+|.++++.+...+.
T Consensus 151 atsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988887744
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=98.39 E-value=0.00022 Score=69.00 Aligned_cols=104 Identities=13% Similarity=0.016 Sum_probs=64.0
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc-ch-hHHHHHHHHHHHHHhhhhHHHHHhhcccccc----
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-SN-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPT---- 296 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt---- 296 (369)
+..+++..+.+.+.||+|+|+.+..+..+.++..+.+.... .. +.......+..+.........+...+|.-|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 44566778889999999999998877655444333322221 11 2111112222222233345667777777764
Q ss_pred ---cchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 297 ---SVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 297 ---~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.++...|+.+....++..+++.+...+++
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777888788788999888877766554
No 191
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.38 E-value=3.1e-07 Score=85.70 Aligned_cols=147 Identities=14% Similarity=-0.046 Sum_probs=93.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
..-.+...+...++|++.||.+|+.++.++..+-.+..+...+...-+...++=.+.+..-....++...+++++||...
T Consensus 75 ~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~ 154 (493)
T KOG1330|consen 75 TVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK 154 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh
Confidence 44456677788999999999999999988766555554444433211222222122222223345678899999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHhccCcCCCCCCCCccc
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVD 365 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~e~~~ 365 (369)
|+++.++.+.+..+|++++-.....+.+..+ +..++..-+++.++.++++.++.+|...+.-||..+
T Consensus 155 Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~ 222 (493)
T KOG1330|consen 155 RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDG 222 (493)
T ss_pred hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccccc
Confidence 9999999999988877776433333222222 334566677777777777777766665444443333
No 192
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.36 E-value=3e-05 Score=72.49 Aligned_cols=108 Identities=13% Similarity=-0.036 Sum_probs=67.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
..+..+...++.++.+.++||+|||+.+..+.++.++..+.. ...+........+...+...........+..|.+| +
T Consensus 41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~ 118 (355)
T TIGR00896 41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q 118 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c
Confidence 345556777888999999999999999887665444333322 22222211111122222212222334556788887 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVAN 327 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~ 327 (369)
.|+++.|+.+....++..+++.+...+.+.
T Consensus 119 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 119 RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 799999998888788888888777766554
No 193
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.3e-05 Score=76.86 Aligned_cols=135 Identities=15% Similarity=0.111 Sum_probs=77.6
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--ccchhHHHHH-HHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNILTTGL-LFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+++++|.++.++++||+|||..+.++.+...+..+.... ..+.....++ =++.+.......+....|..|+-|.+.
T Consensus 70 ~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~ 149 (485)
T KOG0569|consen 70 FIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNL 149 (485)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh
Confidence 4577889999999999999998887766544443333222 1111111111 122222112233567889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH-HHHHHhhch-hhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLV-AVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~-~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
|+....+......++..++..+ .+.++.... +...+....+.+++. ++.+.+.||+..
T Consensus 150 RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk 209 (485)
T KOG0569|consen 150 RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPK 209 (485)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 9999888877777777777433 344443322 112222223333443 344455689843
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.33 E-value=0.00011 Score=69.95 Aligned_cols=131 Identities=16% Similarity=0.087 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHhhh-----chhH-HHHHHHHHHHHHHHHHhhcc--chhH-HHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 226 IPGLLLAAILVDTA-----GRKL-SITIMFTLSCLFLLPLVTYQ--SNIL-TTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 226 ~~g~i~~~~l~dr~-----GRR~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
.+..++.+.++||+ |||+ ++..+..+.++....+.+.. .+.. ...+.++..++..........+.+|.+|.
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 45667899999999 8876 56665555544444433321 1111 11221222222223344678899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVAN-CHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
+.|+++.++......++.++++.+...+.+. .++...+++.++..++..+.. +..||++.
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~ 186 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEV 186 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcc
Confidence 9999999999877778888888777666664 245556666666555544433 34567643
No 195
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.29 E-value=5e-05 Score=66.86 Aligned_cols=132 Identities=14% Similarity=0.064 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHhhhchhHHHHHHHHHHHHHHH-HHhh-ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhH
Q 017592 226 IPGLLLAAILVDTAGRKLSITIMFTLSCLFLL-PLVT-YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 303 (369)
Q Consensus 226 ~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~ 303 (369)
.+...+.+.++||.||+.+++.+..+..+..= .+.+ ..+++....++-.. ...- -+..|-..+-+-|.+.-+|+.
T Consensus 314 av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLs--ysll-AcslWP~va~~vpE~qLGTay 390 (459)
T KOG4686|consen 314 AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLS--YSLL-ACSLWPCVASLVPEEQLGTAY 390 (459)
T ss_pred hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhh--HHHH-HHHHhhhhhhhCCHHHhcchH
Confidence 44567899999999999888765433322211 1112 12222222221111 1111 123566777788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhh---HHH-HHHHHHHHHHHHHHHhccCcCCCCCCC
Q 017592 304 GAANAMGRIGGMVCPLVAVALVANCHQM---TAV-VLLVVVIVTSILSVMLIPFETKGQELS 361 (369)
Q Consensus 304 g~~~~~~~i~~~~~p~~~~~l~~~~~~~---~~~-~~~~~~~~i~~~~~~~~~pETkg~~l~ 361 (369)
|++..+.+++-.+.|++...+.+..+.. ..| .....+++....+.+ .+...++..|.
T Consensus 391 gf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~-~~N~kq~gnLN 451 (459)
T KOG4686|consen 391 GFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF-YLNKKQSGNLN 451 (459)
T ss_pred HHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh-heeccccCCCC
Confidence 9999999999999999988776654311 122 333444455444433 34344444443
No 196
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.24 E-value=6.8e-05 Score=71.20 Aligned_cols=136 Identities=17% Similarity=0.109 Sum_probs=71.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---hcc---chhHHHHH--HHHHHHHHhhhhHHHHH
Q 017592 217 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---TYQ---SNILTTGL--LFGARMCVMGAFTVSLI 288 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~ 288 (369)
...+..+...++.++.|.++||+|||+.+..+....++...... ... .......+ .....+......+....
T Consensus 43 ~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (396)
T TIGR00882 43 VFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA 122 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 34455677788889999999999999998765444332222111 110 00010001 01111111111222233
Q ss_pred hhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 289 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 289 ~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+..+.- +.++...|.....+.++..++|.+...+.+ .++..+++..+.+.++..++.+...||.
T Consensus 123 ~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 123 YIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 333332 223345566777777888888888775544 3455566666666655554555544554
No 197
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.24 E-value=1e-05 Score=74.31 Aligned_cols=135 Identities=20% Similarity=0.168 Sum_probs=97.2
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH----HHhhhhHHHHHhhccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARM----CVMGAFTVSLIYAAEIYP 295 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ElfP 295 (369)
.-.+.+++.+.+.|.++||+|+|..+++++.+.....+...+..+.. .++++.. .....+..-..+.++.||
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~----~l~vAR~LQgvgsA~~~tsglamlAd~f~ 189 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP----MLFVARSLQGVGSAFADTSGLAMLADVFP 189 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH----HHHHHHHHhhhhHHHHHhhhHHHHHHHcc
Confidence 33567788888999999999999999988776665554444433322 1222221 111122334568889999
Q ss_pred ccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 296 TSV-RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 296 t~v-R~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
.+. |++++|+.-+...+|-.++|-+...+.+..+...+|++.++++++..++-++.++.||.+
T Consensus 190 ~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 190 EDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred cchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 977 799999999999999999998888777777777899999999988887777766555443
No 198
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.17 E-value=2.3e-05 Score=78.95 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=37.8
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.+...++.|.+|++.|++..|+.+....+|..+++.+...+.+
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 45667899999999999999999999988888888888776654
No 199
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.07 E-value=0.00021 Score=65.59 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=36.1
Q ss_pred HHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 284 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 284 ~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
...........|.+.|++..|+....+.++-+++|.+.+.+.
T Consensus 371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 445678888999999999999999999999999998876543
No 200
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=3.5e-05 Score=70.93 Aligned_cols=73 Identities=16% Similarity=0.038 Sum_probs=56.9
Q ss_pred eccCc---chhhHhHhhhcCCCc-chhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhc
Q 017592 9 ERRCG---HVFLSWFLEFVPPSN-RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQ 81 (369)
Q Consensus 9 G~g~~---~~~~~y~~E~~p~~~-Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 81 (369)
|+|.. ....+.++...|.+. ||.+.++...+..+|.+++......+-...|.+.||++.++..++-....+++
T Consensus 170 gvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 170 GVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 55553 334467888888877 69999999999999999987776666566799999999998888776666544
No 201
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=7.5e-05 Score=71.89 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=97.5
Q ss_pred HHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchh
Q 017592 221 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS 300 (369)
Q Consensus 221 ~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 300 (369)
.++..++.+..-|.++||+|||..+......+.+-.+.+.+.. +...+ ...........++....+.++.-..+.|+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence 3556677778899999999999999887665555443333322 11111 11111112334566788999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCCCCC
Q 017592 301 TGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELS 361 (369)
Q Consensus 301 ~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~ 361 (369)
...|+.+++-+.+..++|.....+....+....+.+-++..+++.+...+++||+...+.+
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 9999999988888899998888777776665666666777777888888888998765544
No 202
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.00 E-value=0.00027 Score=67.94 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=74.8
Q ss_pred HHHHhhhhhHHHHHHHHHhh----hchhHH-HHHHHHHHHHHHHHHhhcc--chh--HHHHHH--HHHHHHHhhhhHHHH
Q 017592 219 FITSLAEIPGLLLAAILVDT----AGRKLS-ITIMFTLSCLFLLPLVTYQ--SNI--LTTGLL--FGARMCVMGAFTVSL 287 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr----~GRR~~-~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~--~~~~~~~~~~~~~~~ 287 (369)
.+..+...+..++.|.++|| +|||+. ++.+....++..+.+.... ... ....+. .....+.........
T Consensus 42 ~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (437)
T TIGR00792 42 LVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYW 121 (437)
T ss_pred HHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHh
Confidence 34445667778889999997 788654 4455444443333333211 111 111111 111111111122346
Q ss_pred Hhhccccc-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-------chhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 288 IYAAEIYP-TSVRSTGAGAANAMGRIGGMVCPLVAVALVAN-------CHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 288 ~~~~ElfP-t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+.+|+.+ .+.|++..++....+.+++.+++.+..++... .++...+.+.+++.++..++.++..||++
T Consensus 122 al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 122 SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 77889874 68899999988888778777776655444431 12233455556655555555555556754
No 203
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.99 E-value=0.00085 Score=63.55 Aligned_cols=134 Identities=18% Similarity=0.086 Sum_probs=73.9
Q ss_pred HhhhhhHHHHH-HHHHhhhchhHHHHHHHHH-HHHHHHHHh-h-cc-chh-HHHHHHHHHHHHHhhhhHHHHHhhccccc
Q 017592 222 SLAEIPGLLLA-AILVDTAGRKLSITIMFTL-SCLFLLPLV-T-YQ-SNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYP 295 (369)
Q Consensus 222 ~~~~~~g~i~~-~~l~dr~GRR~~~~~~~~~-~~~~~~~~~-~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfP 295 (369)
....++...+. .+..||.|||+.++....+ .+.....+. . .. ... ....+.+...++..........+..|..+
T Consensus 48 ~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~ 127 (390)
T TIGR02718 48 WVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFN 127 (390)
T ss_pred HHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33443433333 5567788999886554322 221122222 1 11 111 11111122212222223345667888888
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 296 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 296 t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
.+.|+...+.......+|.++++....++.+..++..++++.+++.++..+..++++||+
T Consensus 128 ~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 128 GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 888888777766666788888887766667766666677777777666555555555543
No 204
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.99 E-value=0.0061 Score=56.94 Aligned_cols=66 Identities=14% Similarity=0.188 Sum_probs=45.8
Q ss_pred eeeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCC-chhhHhhhhHHH
Q 017592 6 AFWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-WRWLLGLSSIPS 71 (369)
Q Consensus 6 ~~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~-WR~~~~~~~ip~ 71 (369)
++.|+|.+ ....+++.+.+|+++|++..++...+.-+|.++++.+...+.+.++ =|..-.++..+.
T Consensus 97 ~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 97 LLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 34566664 3445678999999999999999999999999998877655544332 333334444333
No 205
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.98 E-value=0.0011 Score=62.72 Aligned_cols=119 Identities=12% Similarity=0.079 Sum_probs=66.5
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHH-HHHHHHh-hccchhHHHHHHHHHHHHHhhhhHHHHHhhccccccc
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSC-LFLLPLV-TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 297 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 297 (369)
+..+...++.++.+.++||.|||.........+. ++.+... ...+.+...+.......+.....+....+..| +.+
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~ 124 (382)
T TIGR00902 47 AALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHH
Confidence 3445566777889999999998654432222111 1211111 11222221112111112222223444555544 257
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVV 340 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 340 (369)
.|++..|.....+.++.+++|.....+.+..++...+...+..
T Consensus 125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 7899999999999999999998888887766655555444433
No 206
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.97 E-value=0.00043 Score=61.00 Aligned_cols=107 Identities=18% Similarity=0.077 Sum_probs=62.3
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhh--cc--c-hhHHHHHHHHH--HHHHhhhhHHHHHhh
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQ--S-NILTTGLLFGA--RMCVMGAFTVSLIYA 290 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 290 (369)
.+..+++...| +.+|++.|+.|.|.++.++.+...+-...+.. .. . ......+.+.. .......+.......
T Consensus 43 ~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 34556666665 78899999999999988776655443333222 11 1 11111222211 111112223344556
Q ss_pred cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 291 AEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 291 ~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
.+.|| +.|+++.|+--+..-+++.+-..+...+..
T Consensus 122 ~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 122 VRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 68998 579999999988887777666655544433
No 207
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.97 E-value=0.00021 Score=68.00 Aligned_cols=124 Identities=21% Similarity=0.208 Sum_probs=74.8
Q ss_pred hHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHHHhhcc-c--hhHHHHHHHHHHHHHhhhh-HHHHHhhcccccccc--h
Q 017592 227 PGLLLAAILVDTA-GRKLSITIMFTLSCLFLLPLVTYQ-S--NILTTGLLFGARMCVMGAF-TVSLIYAAEIYPTSV--R 299 (369)
Q Consensus 227 ~g~i~~~~l~dr~-GRR~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~ElfPt~v--R 299 (369)
...+++|+++||+ |+|+.++.+.++..+--+.+.... . ..+...+.++. +-.|.+ +-+-.+.+|+||.+. |
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~--iG~Gl~K~NiS~llg~ly~~~Dprr 153 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALII--VGTGLFKPNISSLLGELYPKDDPRR 153 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH--hccccccccHHHHHHHhcCCCCccc
Confidence 3467899999995 999988876654444333333221 1 11111111111 111222 235678899999844 6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
-.++++-+...++|++++|++.+++.+..+....|-..++-..++.+..++..
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 66777778888899999999999887766654455554444455555544443
No 208
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.95 E-value=1.8e-07 Score=90.38 Aligned_cols=104 Identities=22% Similarity=0.196 Sum_probs=68.3
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc---chhHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ---SNILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
.....++.++|.++.+.++||+|||+.+..+..+..+..+...+.. +.....+.=++.++...+......+|..|.-
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~ 131 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA 131 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455677889999999999999999998877665544443333322 2221111112223333344567889999999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHH
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLVA 321 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~~ 321 (369)
|++.|+...++......+|..++..+.
T Consensus 132 ~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 132 PPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999888877766666666665443
No 209
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.91 E-value=0.0012 Score=62.35 Aligned_cols=134 Identities=15% Similarity=0.045 Sum_probs=70.9
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHH-HHHHHHHHHHHHhhc-cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITI-MFTLSCLFLLPLVTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 296 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 296 (369)
.+..+...++.++.+.++||+|||....- ..+.+.+........ .+.+...........+.....+....+..+. .
T Consensus 46 ~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~ 123 (382)
T PRK11128 46 GAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--Q 123 (382)
T ss_pred HHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--H
Confidence 34455667778889999999999532211 111111111111111 2222222222222222222233444454443 3
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 297 SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 297 ~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+.|+.+.+.....+.++..++|.+...+.+..++...++..++..++..+.. ++.||.
T Consensus 124 ~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~ 181 (382)
T PRK11128 124 KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTI 181 (382)
T ss_pred hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCC
Confidence 4578888888888889999999998888776666555655554444333333 334554
No 210
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.88 E-value=0.00028 Score=66.15 Aligned_cols=192 Identities=15% Similarity=0.121 Sum_probs=100.9
Q ss_pred HHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHH
Q 017592 155 LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLIS-ELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAA 233 (369)
Q Consensus 155 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~ 233 (369)
+.+.+++. ++.+++++....+...+|++...+. .+. .+ ........ ....+..+.+.+|+++++
T Consensus 258 si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~l~------~s----gY~~~~aG--~ig~l~iv~Gmlga~~~g 322 (480)
T KOG2563|consen 258 SIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLALC------PS----GYEGVFAG--YIGALMIVAGMLGALASG 322 (480)
T ss_pred HHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhccc------cc----cCCccccc--hhHHHHHHHHHHHHHHHH
Confidence 45555543 3355566666666666777655443 221 11 00111111 233444566788889999
Q ss_pred HHHhhhchhHHH-HHHHHHHHHH-HHHHhh---ccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHH
Q 017592 234 ILVDTAGRKLSI-TIMFTLSCLF-LLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 308 (369)
Q Consensus 234 ~l~dr~GRR~~~-~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~ 308 (369)
.+.||.+.-+.. ++.+...... +..... .....+.........++..+..++-.-+..|.-=+..-++..|+.+.
T Consensus 323 ii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~ 402 (480)
T KOG2563|consen 323 IIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNL 402 (480)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEe
Confidence 999998666543 3333332222 111111 11122211222222233344445455567787555666778888888
Q ss_pred HHHHHHHHHHHHHHHHHhhch----hhHHHHHHHHHHHHHHHHHHhccCcCCCCCCC
Q 017592 309 MGRIGGMVCPLVAVALVANCH----QMTAVVLLVVVIVTSILSVMLIPFETKGQELS 361 (369)
Q Consensus 309 ~~~i~~~~~p~~~~~l~~~~~----~~~~~~~~~~~~~i~~~~~~~~~pETkg~~l~ 361 (369)
.+.+.+++-.++........+ ....-+.....+++...++.++-|.-|.+..|
T Consensus 403 ~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 403 SGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred ehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 888888877777665555443 22223444555566666666666666555444
No 211
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.87 E-value=0.025 Score=55.15 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=51.3
Q ss_pred eccCc-chhhHhHhhhcCCC--cchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH
Q 017592 9 ERRCG-HVFLSWFLEFVPPS--NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL 75 (369)
Q Consensus 9 G~g~~-~~~~~y~~E~~p~~--~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~ 75 (369)
|.|.. +...++++|..|++ +|+...++.....++|..++..+.-.+....|||..|.++++..++.+
T Consensus 113 G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 113 GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Confidence 44443 55678999999986 688888888888889999888777776667899999988776544443
No 212
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.0023 Score=59.39 Aligned_cols=148 Identities=18% Similarity=0.080 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcccCCCCChhhHHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHH
Q 017592 168 TILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITI 247 (369)
Q Consensus 168 ~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~ 247 (369)
.+.+..+++...+.+-...+..|.+.+.. +.+..+..+..+..-.+.+.+.+..+++++|+|+|.-++.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f-----------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVF-----------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHh-----------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH
Confidence 33344445555555555555555543210 1111222334444455677888899999999999999988
Q ss_pred HHHHHHHHHHHHh--hc-cchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 248 MFTLSCLFLLPLV--TY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 248 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
+..+.++...... .. .+.......++.........-.....|++-+.|.+--+.=.++...++.+|++++|.+..++
T Consensus 84 gL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 84 GLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 8766555443322 11 11111111122222211111223456888899998777788999999999999999888766
Q ss_pred Hh
Q 017592 325 VA 326 (369)
Q Consensus 325 ~~ 326 (369)
+.
T Consensus 164 il 165 (422)
T COG0738 164 IL 165 (422)
T ss_pred HH
Confidence 55
No 213
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.84 E-value=0.002 Score=62.76 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=74.1
Q ss_pred HhhhhhHHHHHHHHHhhhc-----hhHHHHHHHHHHH-HHHHHHhhccch-hHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 222 SLAEIPGLLLAAILVDTAG-----RKLSITIMFTLSC-LFLLPLVTYQSN-ILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~G-----RR~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
.+...+.. +.+.++||++ ||+.++.+.++++ +....+....+. .....+.++..++........-.+..|..
T Consensus 71 ~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~ 149 (468)
T TIGR00788 71 SLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERI 149 (468)
T ss_pred HHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhh
Confidence 34444443 5999999997 6666666655442 222222221121 11222333333333333445678889999
Q ss_pred cccchhhh---HHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 295 PTSVRSTG---AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 295 Pt~vR~~~---~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
+ +.+..+ .++.+..-.+|..+++.+.+.+.+..++...+++.+++.++.. +..++.||.+
T Consensus 150 ~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~-~~~~~~~E~~ 212 (468)
T TIGR00788 150 R-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL-FVSNLSKERR 212 (468)
T ss_pred h-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHhccccc
Confidence 8 555443 3444454457888888888877776555556666666665553 3344557865
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.0003 Score=67.97 Aligned_cols=130 Identities=20% Similarity=0.102 Sum_probs=90.5
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHH--HHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLL--PLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
..+.+++.+..+.++||+|-|+++..+.+++++..+ ++....+.+...++=++-++.....++....+.+.-.|++.|
T Consensus 83 ~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Er 162 (466)
T KOG2532|consen 83 FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNER 162 (466)
T ss_pred HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHH
Confidence 346777888889999999999999887776665433 333322222222222233333344566788899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHhc
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVAN-CHQMTAVVLLVVVIVTSILSVMLI 351 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 351 (369)
++..++..+...++.+++--+.+.+-+. .++...|++++.+.++-.++.+++
T Consensus 163 s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 163 STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888887776566666665 666778888888877665555444
No 215
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.78 E-value=0.0049 Score=59.00 Aligned_cols=105 Identities=17% Similarity=0.068 Sum_probs=60.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHhh---hchhHHHHHHHHHHHHHHHHHh--hccc----------------hhHHHHHHHHH
Q 017592 217 DEFITSLAEIPGLLLAAILVDT---AGRKLSITIMFTLSCLFLLPLV--TYQS----------------NILTTGLLFGA 275 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr---~GRR~~~~~~~~~~~~~~~~~~--~~~~----------------~~~~~~~~~~~ 275 (369)
..+..+++++.+.+..+.+.+| +||++++..+..+-....+++. .+.+ ..+..++.+..
T Consensus 284 ~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~ 363 (461)
T KOG3098|consen 284 YSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLL 363 (461)
T ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHH
Confidence 3456677888888888888875 7888887766554433333322 1110 01222222222
Q ss_pred HHHHhhhhHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 276 RMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 276 ~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
++.-.-.....+.+...++ ++.|+.+.++.-.-..+.+.++-+..+
T Consensus 364 G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 364 GFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred hhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 2211122346788888888 788888888887665555544443333
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.77 E-value=0.0036 Score=60.29 Aligned_cols=66 Identities=14% Similarity=0.194 Sum_probs=45.8
Q ss_pred HhHhhhcC--CCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHH-HHHHhhccC
Q 017592 18 SWFLEFVP--PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPE 83 (369)
Q Consensus 18 ~y~~E~~p--~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpE 83 (369)
+.+.|.+. |+.||...+.......+|.++++.+.....+..++|..|.+.++.+.+. +...+..+|
T Consensus 109 a~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 109 ALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 46778763 2336777788888888999998877766667788999888776544444 444444554
No 217
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.62 E-value=0.0046 Score=59.30 Aligned_cols=39 Identities=21% Similarity=0.134 Sum_probs=27.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhch-hHHHHHHHHHHHHHH
Q 017592 218 EFITSLAEIPGLLLAAILVDTAGR-KLSITIMFTLSCLFL 256 (369)
Q Consensus 218 ~~i~~~~~~~g~i~~~~l~dr~GR-R~~~~~~~~~~~~~~ 256 (369)
..+..+..+++.+..+.++||+|| |+++..+.+++++..
T Consensus 44 ~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 44 YSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 345567788899999999999965 666666555554433
No 218
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.0014 Score=64.21 Aligned_cols=129 Identities=15% Similarity=0.059 Sum_probs=85.4
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHH--HHHHHHhhhhHHHHHhhcccccccchh
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLF--GARMCVMGAFTVSLIYAAEIYPTSVRS 300 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ElfPt~vR~ 300 (369)
.+......+.+.+.||+|.|.+.+.+.++++..++.-.+..+-+. ..+.+ ..++.....+...-+..+ .|..+-|+
T Consensus 92 ~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~-l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~ 169 (509)
T KOG2504|consen 92 GVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQ-LYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRA 169 (509)
T ss_pred HHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHhhccchhhhcchhhhhh-hHhHHHHH
Confidence 344555678999999999999999888777766555444333221 11211 122211222333334444 55688899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccC
Q 017592 301 TGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPF 353 (369)
Q Consensus 301 ~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~p 353 (369)
.+.|++..-+-+|.++-|.+..++.+..++..+.++++.+.+-..+....+-|
T Consensus 170 lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 170 LATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998888888888888888888877778888887777665555555544
No 219
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.47 E-value=0.0002 Score=56.40 Aligned_cols=71 Identities=17% Similarity=0.233 Sum_probs=55.9
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccCC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPES 84 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpES 84 (369)
+...+++.|..|+++|++..+..+....+|..++..+...+.+..+||..+.+.++..++.. ...+..||+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 45557889999999999999999999999999888777666677899999888776666554 344456664
No 220
>PRK09669 putative symporter YagG; Provisional
Probab=97.46 E-value=0.003 Score=61.01 Aligned_cols=107 Identities=14% Similarity=0.082 Sum_probs=58.0
Q ss_pred HHHhhhhhHHHHHHHHHhh----hchhHH-HHHHHHHHHHHHHHHhh-cc-chh--HHHHHH--HHHHHHHhhhhHHHHH
Q 017592 220 ITSLAEIPGLLLAAILVDT----AGRKLS-ITIMFTLSCLFLLPLVT-YQ-SNI--LTTGLL--FGARMCVMGAFTVSLI 288 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr----~GRR~~-~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~--~~~~~~~~~~~~~~~~ 288 (369)
+.-+...+..++.|.++|| +|||+. ++.+....++....+.. +. +.. ....+. .+...+..........
T Consensus 53 i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a 132 (444)
T PRK09669 53 VVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCA 132 (444)
T ss_pred HHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 3334455666788999998 788654 44444433333322222 11 111 111111 1111111222234567
Q ss_pred hhccccc-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 289 YAAEIYP-TSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 289 ~~~ElfP-t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.+|+.+ .+.|.+..++....+.+++.+++....++..
T Consensus 133 l~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~ 171 (444)
T PRK09669 133 MPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVD 171 (444)
T ss_pred hHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899984 4779988888888888888777765544443
No 221
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.45 E-value=0.012 Score=57.26 Aligned_cols=139 Identities=19% Similarity=0.211 Sum_probs=84.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHH-HHHHHHHHHHhh-ccchh-HHHHHHHHHHHHHhhhhHHHHHhhccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMF-TLSCLFLLPLVT-YQSNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYP 295 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfP 295 (369)
.+..+...+..++.|-++|+-||||.++..+ .++.+....+.+ ..+.+ ...++..++..+..........+.+|+-+
T Consensus 77 sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~ 156 (477)
T PF11700_consen 77 SISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLAR 156 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcC
Confidence 3555666667788899999998888776543 334334333333 22222 23333333334444444566789999999
Q ss_pred ccch--------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHhhch-h-------hHHHHHHHHHH
Q 017592 296 TSVR--------------------------STGAGAANAMGRIGGMVCPLVAVALVANCH-Q-------MTAVVLLVVVI 341 (369)
Q Consensus 296 t~vR--------------------------~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-~-------~~~~~~~~~~~ 341 (369)
.+.+ ++..+...+.|.+|+++.-.+...+....+ . ...+.+.++-.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww 236 (477)
T PF11700_consen 157 PEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWW 236 (477)
T ss_pred CChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHH
Confidence 9888 899999999999999887655443332211 1 22344444444
Q ss_pred HHHHHHHHhccCcCCC
Q 017592 342 VTSILSVMLIPFETKG 357 (369)
Q Consensus 342 ~i~~~~~~~~~pETkg 357 (369)
++..+..+++.||.++
T Consensus 237 ~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 237 LVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHhCCCCCC
Confidence 5555555566677766
No 222
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.42 E-value=0.0081 Score=58.59 Aligned_cols=102 Identities=10% Similarity=-0.027 Sum_probs=54.9
Q ss_pred HHhhhhhHHHHHHHHHh----hhchhH-HHHHHHHHHHHHHHHHhhcc--chh--HHHHHH-HH-HHHHHhhhhHHHHHh
Q 017592 221 TSLAEIPGLLLAAILVD----TAGRKL-SITIMFTLSCLFLLPLVTYQ--SNI--LTTGLL-FG-ARMCVMGAFTVSLIY 289 (369)
Q Consensus 221 ~~~~~~~g~i~~~~l~d----r~GRR~-~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~-~~-~~~~~~~~~~~~~~~ 289 (369)
.-+...+..++.|.++| |+|||+ .+..+...+++....+.... +.. ..+.+. +. ...+...........
T Consensus 51 ~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al 130 (473)
T PRK10429 51 ARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSL 130 (473)
T ss_pred HHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhh
Confidence 33444556667899999 569955 45555554444433332211 111 111111 11 111111222345678
Q ss_pred hccccc-ccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 290 AAEIYP-TSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 290 ~~ElfP-t~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
.+|+-+ .+.|.+..++-...+.+++++.+.+..
T Consensus 131 ~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 131 VPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred hHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899984 788999888877666676666554443
No 223
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.0019 Score=60.88 Aligned_cols=94 Identities=18% Similarity=0.043 Sum_probs=61.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcc---chhHHHHHHHH----HHHHHhhhhHHHHH
Q 017592 216 IDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ---SNILTTGLLFG----ARMCVMGAFTVSLI 288 (369)
Q Consensus 216 ~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~ 288 (369)
......+++.+.|.++.|++.||+|||++....+++..++.+...... +..-....+++ ..+.+.+=++...+
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAt 167 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSAT 167 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHH
Confidence 345677888999999999999999999998776665555444333321 11111122222 22223344678899
Q ss_pred hhcccccccchhhhHHHHHHH
Q 017592 289 YAAEIYPTSVRSTGAGAANAM 309 (369)
Q Consensus 289 ~~~ElfPt~vR~~~~g~~~~~ 309 (369)
+++|---.+.|++=.+...++
T Consensus 168 I~SE~an~~~RGa~iaavFa~ 188 (538)
T KOG0252|consen 168 IMSESANKKTRGAFIAAVFAM 188 (538)
T ss_pred HhhhhhhhccccceeEEEEEe
Confidence 999999999998876655433
No 224
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.38 E-value=0.049 Score=51.47 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=52.8
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc--CCCchhhHhhhhHHHHHHHHHHhhccCChh
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP--RLDWRWLLGLSSIPSFILLAFLGFQPESPR 86 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~--~~~WR~~~~~~~ip~~i~~~~~~~lpESP~ 86 (369)
.+.++|+--..|+++=.++.+......-.|..++++++..+.. ..+.+.++.+......+.++..+++|-.++
T Consensus 112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 4556787666777777788888888888888888888877644 345666777776666666666677887665
No 225
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.36 E-value=4.4e-05 Score=75.21 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=2.9
Q ss_pred eeeeccCcc---hhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017592 6 AFWERRCGH---VFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAW 52 (369)
Q Consensus 6 ~~~G~g~~~---~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~ 52 (369)
.+.|+|+.| +..+|+=|.++++.-+.+.+++.....+|..++.+++.
T Consensus 149 ~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~ 198 (539)
T PF03137_consen 149 LLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGS 198 (539)
T ss_dssp ---SSS--------------------------------------------
T ss_pred HHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHH
Confidence 567999974 55689999999999999999999988888877655543
No 226
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.36 E-value=0.0015 Score=62.87 Aligned_cols=128 Identities=19% Similarity=0.084 Sum_probs=73.1
Q ss_pred hHHHHHHHHHh----hhchhHHHH-HHHHHHHHHHHHHhhc-c---chhHHHHHHHHH----HHHHhhhhHHHHHhhccc
Q 017592 227 PGLLLAAILVD----TAGRKLSIT-IMFTLSCLFLLPLVTY-Q---SNILTTGLLFGA----RMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 227 ~g~i~~~~l~d----r~GRR~~~~-~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~El 293 (369)
+..++.|.++| |+|||+..+ .+....++....+... . +........+.. ..+.........++.+|+
T Consensus 52 i~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~l 131 (428)
T PF13347_consen 52 ITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPEL 131 (428)
T ss_pred hcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccc
Confidence 33447888999 899888654 4445555444444432 1 111111111111 111112223457899999
Q ss_pred ccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhch-------hhHHHHHHHHHHHHHHHHHHhccCc
Q 017592 294 YPT-SVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-------QMTAVVLLVVVIVTSILSVMLIPFE 354 (369)
Q Consensus 294 fPt-~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~pE 354 (369)
.++ +.|.+..+.....+.+++.+...+.+.+.+..+ ......+++++.+++.++..+..+|
T Consensus 132 t~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 132 TPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred cccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 995 689999999998888888766666665554322 1223344555555555666666667
No 227
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.35 E-value=0.02 Score=52.75 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=77.4
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
...++..+|...-+.++|++|||+.+...+..+++....-....+-.....+-....+. .+..+..-++-.|.-|+..|
T Consensus 121 ~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g-~gg~pv~~~~yle~lp~~~r 199 (528)
T KOG0253|consen 121 SVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFG-VGGLPVDSAIYLEFLPSSHR 199 (528)
T ss_pred HHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhcc-CCCccHhHHHHHHhccCcCC
Confidence 33556677888889999999999999887777776654433322211111222222222 23356667788899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCC
Q 017592 300 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 356 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETk 356 (369)
.+.+-.. ..-.+|.+....+.-..+...++..-.+..+ ..+.-+...++..||..
T Consensus 200 ~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~-~pl~~~a~f~~w~~ESp 254 (528)
T KOG0253|consen 200 WLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSS-TPLMFAARFLVWVYESP 254 (528)
T ss_pred CcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH-hHHHHHHHHHhhcccCc
Confidence 9887666 3334566666555443344444332223333 22222334455667763
No 228
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.32 E-value=0.0027 Score=61.84 Aligned_cols=139 Identities=15% Similarity=0.076 Sum_probs=97.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+..++.+++.+.++.+.||++-.+.+..+.++.+++.+......+.....++-++.+++-...++..-.+++--|..+.
T Consensus 88 t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e 167 (495)
T KOG2533|consen 88 TVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE 167 (495)
T ss_pred HHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh
Confidence 45567788999999999999996666655555444444332222222223333344555566677888889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHh------hchhhHHHHHHHHHHHHHHHHHHhccCcCCC
Q 017592 299 RSTGAGAANAMGRIGGMVCPLVAVALVA------NCHQMTAVVLLVVVIVTSILSVMLIPFETKG 357 (369)
Q Consensus 299 R~~~~g~~~~~~~i~~~~~p~~~~~l~~------~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg 357 (369)
|++-+|+-++.+.+++++++++...+.. ..++...|++-+++.++.++++++++|+-..
T Consensus 168 ~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 168 RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999988876432 1234456788888887777777777666544
No 229
>PRK11462 putative transporter; Provisional
Probab=97.26 E-value=0.025 Score=54.94 Aligned_cols=104 Identities=11% Similarity=-0.007 Sum_probs=59.9
Q ss_pred hhhhhHHHHHHHHHhh----hchhHHHH-HHHHHHHHHHHHHhh-cc-chh--HHHHHH-H-HHHHHHhhhhHHHHHhhc
Q 017592 223 LAEIPGLLLAAILVDT----AGRKLSIT-IMFTLSCLFLLPLVT-YQ-SNI--LTTGLL-F-GARMCVMGAFTVSLIYAA 291 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr----~GRR~~~~-~~~~~~~~~~~~~~~-~~-~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~ 291 (369)
+.-.+.-++.|.++|| +|||+..+ .+....++....+.. +. +.. ..+... + ....+........+.+.+
T Consensus 56 i~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~ 135 (460)
T PRK11462 56 ALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGG 135 (460)
T ss_pred HHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3345556778999995 78876654 443444433333322 11 111 111111 1 111112222234567899
Q ss_pred cccc-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 292 EIYP-TSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 292 ElfP-t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
|+-+ .+.|++..++-...+.+++.+++.+..++..
T Consensus 136 ~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 136 VITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 5889999999998888888888766655444
No 230
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.24 E-value=0.009 Score=57.52 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=81.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 298 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 298 (369)
.+.-.++++...++..++.|+|+-+++..++.+-..=.+.+....+.|..+-.=.+-.......|+.+-.|++-.-|++.
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l 492 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL 492 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 44456778888899999999999999887665544433333333444433222222223334456777789999999999
Q ss_pred hhhhHHHHHHHHH-HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 017592 299 RSTGAGAANAMGR-IGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 345 (369)
Q Consensus 299 R~~~~g~~~~~~~-i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 345 (369)
|+++.++....-. +|-.++.++.+.+....+...+|-++++.+++..
T Consensus 493 ~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 493 RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred hHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 9999999877653 4555555555555555554455666665554433
No 231
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.05 E-value=0.051 Score=52.61 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=54.6
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHH-HHHhhccCC
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLGFQPES 84 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpES 84 (369)
....+|++..+..+.|-...++....+..|..++..+........+--.++.++++..++.. +.+..+|||
T Consensus 131 s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 131 SVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred hhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 34457899999999999999999997877777776666555555777778888877766654 556789997
No 232
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.94 E-value=0.039 Score=55.79 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=59.4
Q ss_pred HHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHhhc--cc---hhH---HHHHHHHHHHHHhhhhHHHHHhhccccccc-
Q 017592 228 GLLLAAILVDT-AGRKLSITIMFTLSCLFLLPLVTY--QS---NIL---TTGLLFGARMCVMGAFTVSLIYAAEIYPTS- 297 (369)
Q Consensus 228 g~i~~~~l~dr-~GRR~~~~~~~~~~~~~~~~~~~~--~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~- 297 (369)
..++.++++|+ +||++.+..+.++..+....+... .. ... ....+.+...+..+.-+..-....|.|+.+
T Consensus 39 ~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~ 118 (654)
T TIGR00926 39 TPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ 118 (654)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence 35678899997 699998877665544332222221 00 011 111111111111111234566777888753
Q ss_pred --chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017592 298 --VRSTGAGAANAMGRIGGMVCPLVAVALVAN 327 (369)
Q Consensus 298 --vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~ 327 (369)
.|...+.+.+...++|+++++.+.+++.+.
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~ 150 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGD 150 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478889999999999999999888877643
No 233
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.93 E-value=0.017 Score=58.13 Aligned_cols=79 Identities=14% Similarity=0.107 Sum_probs=57.8
Q ss_pred eeeeccCcc---hhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc----c-------------C--CCchhh
Q 017592 6 AFWERRCGH---VFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM----P-------------R--LDWRWL 63 (369)
Q Consensus 6 ~~~G~g~~~---~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~----~-------------~--~~WR~~ 63 (369)
.|.|+|+.| ...+|+=|.+.++.-..+.+++...-.+|..++.+++.+.. + . ..|..-
T Consensus 245 ~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG 324 (735)
T KOG3626|consen 245 LLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG 324 (735)
T ss_pred HHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence 456999974 55689999999999999999998888888877766554421 0 0 147777
Q ss_pred HhhhhHHHHHHHHHHhhccCC
Q 017592 64 LGLSSIPSFILLAFLGFQPES 84 (369)
Q Consensus 64 ~~~~~ip~~i~~~~~~~lpES 84 (369)
|++++...++..+-.++.|..
T Consensus 325 FLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 325 FLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred HHHHHHHHHHHHHHHHhCccc
Confidence 888877777776666666653
No 234
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.62 E-value=0.11 Score=49.28 Aligned_cols=128 Identities=19% Similarity=0.207 Sum_probs=57.5
Q ss_pred HhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh---h----ccchhHHHHHH-HHHHHHHhhhhHHHHHhhccc
Q 017592 222 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---T----YQSNILTTGLL-FGARMCVMGAFTVSLIYAAEI 293 (369)
Q Consensus 222 ~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~El 293 (369)
.+..+....+.|.+.||+|.|+-++....+..++..+.. + ..+.++..+.. ....++..+..++. |-
T Consensus 53 ~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~-----Ea 127 (412)
T PF01306_consen 53 SLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLS-----EA 127 (412)
T ss_dssp HHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHH-----HH
T ss_pred HHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH-----HH
Confidence 345566677889999999977755443322222211111 1 11111111110 00001111222222 44
Q ss_pred ccccc-hhhh--HHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 294 YPTSV-RSTG--AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 294 fPt~v-R~~~--~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+-.+. |..+ .|=....|.+|-+++..+.+.+.+. ++...+++.++..++..++.++..|+.
T Consensus 128 ~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 128 YAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp HHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 43322 3333 4445566777777777787777653 444445544444444444444444443
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.49 E-value=0.82 Score=44.40 Aligned_cols=41 Identities=5% Similarity=-0.138 Sum_probs=36.8
Q ss_pred HHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 285 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 285 ~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
+.|.+++|++.++.-.+=.++....+.++.++++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999998776654
No 236
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.47 E-value=0.041 Score=53.01 Aligned_cols=128 Identities=20% Similarity=0.171 Sum_probs=73.2
Q ss_pred HHHHHHHhhh-----chhHHHHHHHHHHHHHHHHHhh-cc---chhHHHHHHHHHHHHHhhhhHHHHHhhcccc---ccc
Q 017592 230 LLAAILVDTA-----GRKLSITIMFTLSCLFLLPLVT-YQ---SNILTTGLLFGARMCVMGAFTVSLIYAAEIY---PTS 297 (369)
Q Consensus 230 i~~~~l~dr~-----GRR~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf---Pt~ 297 (369)
.+.|+++|-+ .||+-++.+.+++.+....+.. .. +......++++..++.....-..-....|.- |.+
T Consensus 42 p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 42 PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4788999975 3455555565555443333332 11 1122223333333333333334555666664 555
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 298 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 298 vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
|+.-.+.+..+-.+|++++..+.+++.+..+....+.+.+.+.++..+..+++++|.+.+
T Consensus 122 -~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~ 181 (433)
T PF03092_consen 122 -RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVR 181 (433)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcccc
Confidence 777788888877788888887777777765544455666666666555666666774433
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.42 E-value=0.12 Score=49.75 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=60.7
Q ss_pred hHHHHHHHHHhh----hchhHHHHH-HHHHHHHHHHHHhh-cc----chh-HHHHHHHHHHHHHhhhhHHHHHhhccccc
Q 017592 227 PGLLLAAILVDT----AGRKLSITI-MFTLSCLFLLPLVT-YQ----SNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYP 295 (369)
Q Consensus 227 ~g~i~~~~l~dr----~GRR~~~~~-~~~~~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ElfP 295 (369)
+.-.+.|.++|| +|||+..+. +.+..+++..+... +. ... ...+.......+....+.+..++.+|+-+
T Consensus 63 i~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~ 142 (467)
T COG2211 63 ITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ 142 (467)
T ss_pred HhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC
Confidence 344577888884 788776544 33333333333222 21 111 11122222222333333456678899977
Q ss_pred c-cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017592 296 T-SVRSTGAGAANAMGRIGGMVCPLVAVALVANC 328 (369)
Q Consensus 296 t-~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~ 328 (369)
. +.|.+-.++=...+.+++++.....+++.+..
T Consensus 143 d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~ 176 (467)
T COG2211 143 DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLF 176 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 77999999999999999888888877776644
No 238
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.30 E-value=0.13 Score=48.71 Aligned_cols=110 Identities=16% Similarity=0.127 Sum_probs=65.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH-Hh-hcc--chhHHHHHHHHHHHHHhhhh----HHHHH
Q 017592 217 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLP-LV-TYQ--SNILTTGLLFGARMCVMGAF----TVSLI 288 (369)
Q Consensus 217 ~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~ 288 (369)
..++..+..++-.+.+.|+.||+|-|.....+....++-..+ +. ... .+....-+...+......+. .++.-
T Consensus 84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPsk 163 (480)
T KOG2563|consen 84 LSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSK 163 (480)
T ss_pred HHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccH
Confidence 345556777888888999999999999988776655443222 11 111 11111111222222111111 12233
Q ss_pred hhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 289 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 289 ~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+..--||++.|+++..++...+-+|..++..+-+.+..
T Consensus 164 iA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 164 IAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 44556999999999999988887887777665554444
No 239
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.24 E-value=0.99 Score=41.78 Aligned_cols=132 Identities=17% Similarity=0.068 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHhhhhHH--HHH---hhcccccccc
Q 017592 225 EIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLL-FGARMCVMGAFTV--SLI---YAAEIYPTSV 298 (369)
Q Consensus 225 ~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~---~~~ElfPt~v 298 (369)
..+...+.|.++||+|||+..+..+++-.+..+.-.. ++.....+. .+.+......++. .|. .-..=||.+-
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~--~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~ 159 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS--SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW 159 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 3444567889999999999877655544433332222 111111111 1111111111111 122 1223466665
Q ss_pred hhhhHHHHHHH-HHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHHhccCcCCCC
Q 017592 299 RSTGAGAANAM-GRIGGMVCPLVAVALVANC--HQMTAVVLLVVVIVTSILSVMLIPFETKGQ 358 (369)
Q Consensus 299 R~~~~g~~~~~-~~i~~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~pETkg~ 358 (369)
.+.-.+..... +.+.++.+..+...+.+.. ++..||..-..+..++.+++...-+|..|.
T Consensus 160 L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 160 LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 55555544422 2344455555555444433 234566665666666666665544676665
No 240
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.19 E-value=0.18 Score=46.25 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=51.3
Q ss_pred chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc--CCCchhhHhhhhHHHHHHHHHHhhccCChh
Q 017592 14 HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP--RLDWRWLLGLSSIPSFILLAFLGFQPESPR 86 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~--~~~WR~~~~~~~ip~~i~~~~~~~lpESP~ 86 (369)
.+.++|+-+..+|+++.+..+..-...-.|...++.++..+.+ ..+.+.+..++..-..+...+..++|.-+|
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 4556788899999999999988887777888887777766543 345566666665555555555666776554
No 241
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.17 E-value=0.96 Score=43.10 Aligned_cols=42 Identities=29% Similarity=0.291 Sum_probs=27.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHHHhh
Q 017592 220 ITSLAEIPGLLLAAILVDTAG-RKLSITIMFTLSCLFLLPLVT 261 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~G-RR~~~~~~~~~~~~~~~~~~~ 261 (369)
+..+..+++..+.+.++||.+ +|+++....+++++.+.....
T Consensus 45 ~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 45 VGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788889999999985 455665655555554444333
No 242
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.63 E-value=0.35 Score=46.75 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=77.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHH---HhhccchhHHHHHHHHHHHH---HhhhhHHHHHhh
Q 017592 219 FITSLAEIPGLLLAAILVDTAG--RKLSITIMFTLSCLFLLP---LVTYQSNILTTGLLFGARMC---VMGAFTVSLIYA 290 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~G--RR~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 290 (369)
-...++..+++++.++...|-| ||+++... +++++..+. +....++.. .++.++.++ ..+..+..-.|.
T Consensus 78 aa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~-ii~~~g~llY~~l~~~~~~~~--y~mL~~R~l~Gvg~~n~a~lR~Y~ 154 (488)
T KOG2325|consen 78 AASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF-LIAIIGNLLYLALAYVPNGVK--YLMLVARILTGVGVGNFAVLRAYI 154 (488)
T ss_pred HHHHHHHHhcchhhcccccccCCcccCHHHHH-HHHHHHHHHHHHHHhcccchH--HHHHHHHHHcCcCcccHHHHHHHH
Confidence 3456788888999999999998 66665543 333332222 222112121 112222221 224456788899
Q ss_pred cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh------------hch-hhHHHHHHHHHHHHHHHHHHhccCcC
Q 017592 291 AEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA------------NCH-QMTAVVLLVVVIVTSILSVMLIPFET 355 (369)
Q Consensus 291 ~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~------------~~~-~~~~~~~~~~~~~i~~~~~~~~~pET 355 (369)
+.---.+.|.++++...+.--++.+++|...+.+.. .++ ...+.++.+++.++..++..++..|-
T Consensus 155 a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 155 ADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 998888888888888777545566666644332211 011 13456677777777777766666554
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.54 E-value=1.1 Score=36.58 Aligned_cols=102 Identities=12% Similarity=-0.026 Sum_probs=62.3
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 299 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 299 (369)
+.-....++++++..+++++|.|+.++++.+.-.+........ +.+.......+.++.....|...-.+..|.-..+.|
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 3344456667888899999999999988776555444332222 222211222222222233355555678888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 017592 300 STGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 300 ~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
++-.|+...+...+.+++..+..
T Consensus 124 ~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776666666654443
No 244
>PRK09848 glucuronide transporter; Provisional
Probab=95.47 E-value=1.1 Score=43.37 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=20.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhh----chhHHHH
Q 017592 219 FITSLAEIPGLLLAAILVDTA----GRKLSIT 246 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~----GRR~~~~ 246 (369)
.+..+...+..++.|.++||. |||+.++
T Consensus 51 ~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~ 82 (448)
T PRK09848 51 LLVRVFDAFADVFAGRVVDSVNTRWGKFRPFL 82 (448)
T ss_pred HHHHHHHHHhhhhheeeeecCCCCCcCchHHH
Confidence 445566677788999999985 7777553
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.29 E-value=0.69 Score=43.54 Aligned_cols=47 Identities=21% Similarity=0.162 Sum_probs=39.8
Q ss_pred HHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 017592 284 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 330 (369)
Q Consensus 284 ~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~ 330 (369)
.......+|+-|.+.|++++++.+.+--++-+++..+...+++..++
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 45678899999999999999999999888888888888877776554
No 246
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.89 E-value=0.55 Score=41.43 Aligned_cols=106 Identities=26% Similarity=0.212 Sum_probs=58.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHHHHhhhhHHHHHhhcccccc-
Q 017592 220 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS--NILTTGLLFGARMCVMGAFTVSLIYAAEIYPT- 296 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt- 296 (369)
...+....+.++.+.+.||.|||+.+..+........+......+ ............+......+....+.+|.+|.
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T COG0477 47 AFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEA 126 (338)
T ss_pred HHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCch
Confidence 334445555688999999999997776655431111111111111 11111111111222223445678899999998
Q ss_pred cchhhhHHHHHH-HHHHHHHHHHHHHHHHH
Q 017592 297 SVRSTGAGAANA-MGRIGGMVCPLVAVALV 325 (369)
Q Consensus 297 ~vR~~~~g~~~~-~~~i~~~~~p~~~~~l~ 325 (369)
..|+...+.... ...++..++|.+...+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 127 TERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677877777776 45566677775544443
No 247
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.83 E-value=0.38 Score=44.07 Aligned_cols=43 Identities=19% Similarity=0.323 Sum_probs=38.0
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 325 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~ 325 (369)
......|.+.+.|.+-+++-.++.+.+..+|++++|++...+.
T Consensus 28 q~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 28 QVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999988666
No 248
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.94 E-value=5.9 Score=37.61 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=26.2
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 322 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~ 322 (369)
+.-.+..+.|-.|.+.|--+.|.....-.+|-.++.++..
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3334445566778899988888777665566666655543
No 249
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.36 E-value=1 Score=43.73 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=33.9
Q ss_pred HHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 017592 285 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 330 (369)
Q Consensus 285 ~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~ 330 (369)
...+..+|+.-++.+++..|+....+-++-+++|..........+.
T Consensus 408 ~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~ 453 (488)
T KOG2325|consen 408 ALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGP 453 (488)
T ss_pred hHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCc
Confidence 3567888999999999999888777777777777666554444443
No 250
>PF12832 MFS_1_like: MFS_1 like family
Probab=90.78 E-value=2.7 Score=29.58 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=25.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHH
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFT 250 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~ 250 (369)
.+..+..+++..+.+.++||.||++.......
T Consensus 42 ~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 42 AIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 34456788889999999999999998766443
No 251
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.62 E-value=11 Score=33.35 Aligned_cols=53 Identities=19% Similarity=0.374 Sum_probs=37.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhc------cCCCchhhHhhhhHHHHHHHHHHh
Q 017592 26 PSNRGMWMVIFSSFWTIGSVSEAIGAWIIM------PRLDWRWLLGLSSIPSFILLAFLG 79 (369)
Q Consensus 26 ~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~------~~~~WR~~~~~~~ip~~i~~~~~~ 79 (369)
.|+|+..+.+...++++|.+++.+. +.+. -...|++.+.+.++..++-++.+.
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ip-F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ 59 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIP-FLISSSVVIALTNNWQWILSIFILLIFIPLILYI 59 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhh-HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678888888899999999986543 2221 124699998887776666555544
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=90.46 E-value=18 Score=35.18 Aligned_cols=67 Identities=21% Similarity=0.239 Sum_probs=50.5
Q ss_pred chhhHhHhhhcCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhh
Q 017592 14 HVFLSWFLEFVPPSN--RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGF 80 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~--Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~ 80 (369)
+.+.+.++|.-|++. |....+++....++|.+++..+..++...++|...|.++++-..+.++.++.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 777788888876653 3444566677788999998888877777899999999998877666555443
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.80 E-value=20 Score=34.64 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=26.5
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
.+....+.++..+++.|-.+..+....-.+|-.++...
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677889999999989888777766555554444433
No 254
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=88.98 E-value=22 Score=33.96 Aligned_cols=98 Identities=17% Similarity=0.043 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHHH
Q 017592 228 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 307 (369)
Q Consensus 228 g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~~ 307 (369)
..+...++.|.+|-|++++...+...+.-..+.+..+-. ..-+.-+......++-...+.|+=-.-|++.=-++.|.+.
T Consensus 57 ~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~-~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~r 135 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL-AMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTR 135 (412)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH-HHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHH
Confidence 345677899999999999887665444333333322211 1111111111112222234455545557776666677777
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 017592 308 AMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 308 ~~~~i~~~~~p~~~~~l~~ 326 (369)
+..-+|.+++..+...+.+
T Consensus 136 aa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 136 AATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6666666666666554444
No 255
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.65 E-value=26 Score=34.41 Aligned_cols=42 Identities=12% Similarity=-0.034 Sum_probs=35.9
Q ss_pred HHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 285 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 326 (369)
Q Consensus 285 ~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~ 326 (369)
+.|.+.+|+++++.-.+-.++....++++.+++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999888777665544
No 256
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.53 E-value=28 Score=32.57 Aligned_cols=125 Identities=15% Similarity=0.006 Sum_probs=67.8
Q ss_pred hhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhh
Q 017592 223 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 302 (369)
Q Consensus 223 ~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~ 302 (369)
++--....+...+..|+|-++.+..+.++.++-...= ...+......-.......+...+.+....+-|-||.++-..
T Consensus 58 l~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR-~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~m- 135 (395)
T COG2807 58 LAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIR-SLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLM- 135 (395)
T ss_pred HHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhH-
Confidence 3334445667778888888887776554333222110 11112222222222233333345567888889999876333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHH
Q 017592 303 AGAANAMGRIGGMVCPLVAVALVANC-HQMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 303 ~g~~~~~~~i~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~ 349 (369)
+|+-...-.+++.+++...+++..+. ++..+..+.+..++++.++.+
T Consensus 136 tglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 136 TGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 33333333455666666655555544 456677777888877665554
No 257
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=85.20 E-value=0.33 Score=44.44 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=0.0
Q ss_pred ceeeeccCcchhh---HhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHH---hccCCCchh--hHhhhhHHHHHHHH
Q 017592 5 WAFWERRCGHVFL---SWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI---IMPRLDWRW--LLGLSSIPSFILLA 76 (369)
Q Consensus 5 ~~~~G~g~~~~~~---~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~---~~~~~~WR~--~~~~~~ip~~i~~~ 76 (369)
+++.|.+.+.... .+.+ ..|++.- .....+.+++.++.+++... ..+...+.. .|.++.+..++.++
T Consensus 4 v~~~~~~~~~~q~s~~glas-~~p~~y~----~a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~ 78 (309)
T PF01733_consen 4 VALIGFANAVLQSSLFGLAS-LFPPKYT----QAVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCII 78 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEHhhhHHHhccHHHHHh-cCCHHHH----HHHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHH
Confidence 3456666653333 3444 4666553 34555666666665544332 122223333 35555666666667
Q ss_pred HHhhccCChhhHh
Q 017592 77 FLGFQPESPRYLC 89 (369)
Q Consensus 77 ~~~~lpESP~~l~ 89 (369)
.++.++-+|.+..
T Consensus 79 ~~~~l~~~~~~~~ 91 (309)
T PF01733_consen 79 LYFILPRSPFYRY 91 (309)
T ss_dssp -------------
T ss_pred HHHHhccChHHHH
Confidence 7777888876543
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=84.44 E-value=17 Score=33.99 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=47.5
Q ss_pred HHHHHhhccccccc---chhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 017592 284 TVSLIYAAEIYPTS---VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 349 (369)
Q Consensus 284 ~~~~~~~~ElfPt~---vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 349 (369)
+....+.+|.|+.+ .|.+++.+.+..-++|+.+++...+++.+..+....|.+-++..+++.+..+
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 45677888999886 3667777888888999999998888887666655566665665565554443
No 259
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=83.89 E-value=2.6 Score=37.26 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=47.1
Q ss_pred hHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhc
Q 017592 19 WFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQ 81 (369)
Q Consensus 19 y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 81 (369)
...+.+|. +||.++++.-.+..++..+-+.+...+.+...-+.++++...|.++.++..+++
T Consensus 120 t~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 120 TCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 34588885 699999999999999888777776666555667778888888888776655444
No 260
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=80.52 E-value=29 Score=33.14 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=60.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHH-HHHHHHHHHHhhc-c-chhHHHHHH-HHHHHHHhhhhHHHHHhhcccc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMF-TLSCLFLLPLVTY-Q-SNILTTGLL-FGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Elf 294 (369)
-+.++...+-.++-|-++|+-|+|+-....+ .+..++...+.+. . +.+....+. .....+..........+.+.+.
T Consensus 65 aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~ 144 (438)
T COG2270 65 AIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLT 144 (438)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhc
Confidence 3445555555677889999999888765443 3444444343332 2 233222222 2222222333334578888888
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHH
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCPLV 320 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p~~ 320 (369)
+.+.-++..++....+.+++.+.-.+
T Consensus 145 ~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 145 TKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred CccccCcccccccccccccchHHHHH
Confidence 88777777888888888888665443
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=77.43 E-value=1.8 Score=40.70 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=47.6
Q ss_pred chhhHhHhhhcCCCc---chhHHHHHHHHHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHH
Q 017592 14 HVFLSWFLEFVPPSN---RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFL 78 (369)
Q Consensus 14 ~~~~~y~~E~~p~~~---Rg~~~~~~~~~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 78 (369)
|...++.++-.+++. |....+.+....++|.+++..+.-.+-.+.+|...|.+.++..++.++.+
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 788888888777663 45556677888889999876665555567899999999887777665543
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=75.07 E-value=2.8 Score=34.15 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=37.2
Q ss_pred eeeeccCc---chhhHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 6 AFWERRCG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 54 (369)
Q Consensus 6 ~~~G~g~~---~~~~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~ 54 (369)
++.|+|++ .....|+.|.+.++.|++..++.-.....+.+.+++..+..
T Consensus 97 ~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 97 ALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678887 45567999999999999998887777777777776655543
No 263
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.26 E-value=51 Score=32.01 Aligned_cols=103 Identities=15% Similarity=-0.019 Sum_probs=63.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccc
Q 017592 215 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY 294 (369)
Q Consensus 215 ~~~~~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 294 (369)
|...-+.-..-.+.+++++.+.|++|.|..+..+...-..+.+..... +.+.........++.....|...-.|.+|..
T Consensus 53 y~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~s 131 (461)
T KOG3098|consen 53 YYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNS 131 (461)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcC
Confidence 333334344556678899999999999999988766444444333332 3332222222222211122334456899999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHH
Q 017592 295 PTSVRSTGAGAANAMGRIGGMVCP 318 (369)
Q Consensus 295 Pt~vR~~~~g~~~~~~~i~~~~~p 318 (369)
+.+.+.+-.++..+++..+.+++.
T Consensus 132 t~~tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 132 TRETIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred ChhhHHHHHHHHHHHHHHHHHhhh
Confidence 999988888888888776666654
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=72.41 E-value=50 Score=32.43 Aligned_cols=141 Identities=12% Similarity=0.083 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhchhHHHHH-HHHHHHHHHHHHhhcc------------------------chhHHHHHHHHHHHHHhhh
Q 017592 228 GLLLAAILVDTAGRKLSITI-MFTLSCLFLLPLVTYQ------------------------SNILTTGLLFGARMCVMGA 282 (369)
Q Consensus 228 g~i~~~~l~dr~GRR~~~~~-~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~ 282 (369)
+.++=...+.|+|||+..++ ...++++.++.+.... +......+.+...+...--
T Consensus 56 aPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQ 135 (544)
T PF13000_consen 56 APIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQ 135 (544)
T ss_pred hhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccC
Q ss_pred hHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-----------------chhhHHHHHHHHHHHHHH
Q 017592 283 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN-----------------CHQMTAVVLLVVVIVTSI 345 (369)
Q Consensus 283 ~~~~~~~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~-----------------~~~~~~~~~~~~~~~i~~ 345 (369)
-..+-.+.-.+...+.++-| +.|+.+|--.|.+..++....+++ ........+.+.+.++..
T Consensus 136 DIAVDGWALT~Ls~~n~~~A-STcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T 214 (544)
T PF13000_consen 136 DIAVDGWALTMLSPENVGYA-STCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVT 214 (544)
T ss_pred CceeehhhhhhcChhhcchH-HHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHH
Q ss_pred HHHHhccCcCCCCCCCCcccccCC
Q 017592 346 LSVMLIPFETKGQELSDTVDFTSD 369 (369)
Q Consensus 346 ~~~~~~~pETkg~~l~e~~~~~~~ 369 (369)
+.+.++..|....+..+..++-++
T Consensus 215 ~~v~~~k~E~~~~~~~~~~~~~~~ 238 (544)
T PF13000_consen 215 ILVAFFKKEKPHSESLPKIEPINK 238 (544)
T ss_pred HHHheEeecccccccCcccccccc
No 265
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=71.72 E-value=35 Score=24.57 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=31.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhc
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY 262 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~~~~~~ 262 (369)
..+.++..+|.+.+.++.++.++|+.+..+.+.+.+..+.+...
T Consensus 34 saNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 34 SANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888888888888777788877777776666555543
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=68.60 E-value=13 Score=32.42 Aligned_cols=64 Identities=17% Similarity=0.245 Sum_probs=42.1
Q ss_pred eccCc---chhhHhHhhhcCC-CcchhHHHHHHH-HHHHHHHHHHHHHHHhc--cCCCchhhHhhhhHHHH
Q 017592 9 ERRCG---HVFLSWFLEFVPP-SNRGMWMVIFSS-FWTIGSVSEAIGAWIIM--PRLDWRWLLGLSSIPSF 72 (369)
Q Consensus 9 G~g~~---~~~~~y~~E~~p~-~~Rg~~~~~~~~-~~~~G~l~~~~~~~~~~--~~~~WR~~~~~~~ip~~ 72 (369)
|++.+ +...+++.|+.|+ +.|+...+.... ...+|.+++..++..+. ...+||..+........
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 105 GLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 45554 5667789999998 678888887777 56677776654433322 34689996665555443
No 267
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=68.25 E-value=11 Score=36.38 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=29.7
Q ss_pred HhhhhHHHHHhhcccccccchhh-hHHHHHHHHHHHHHHH
Q 017592 279 VMGAFTVSLIYAAEIYPTSVRST-GAGAANAMGRIGGMVC 317 (369)
Q Consensus 279 ~~~~~~~~~~~~~ElfPt~vR~~-~~g~~~~~~~i~~~~~ 317 (369)
.+...+.+-.+.+++.-.+.|.+ +.+....+..+|+.++
T Consensus 156 ~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLG 195 (498)
T KOG0637|consen 156 NNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLG 195 (498)
T ss_pred hhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceee
Confidence 34455678999999999988888 8777777766777665
No 268
>PF12854 PPR_1: PPR repeat
Probab=56.91 E-value=9.1 Score=21.95 Aligned_cols=17 Identities=29% Similarity=0.657 Sum_probs=14.6
Q ss_pred HhhcCChHHHHHHHHHH
Q 017592 88 LCLKGRTAEAHRALEKI 104 (369)
Q Consensus 88 l~~~g~~~~A~~~l~~~ 104 (369)
+.+.|+.++|.+.++++
T Consensus 17 ~Ck~G~~~~A~~l~~~M 33 (34)
T PF12854_consen 17 YCKAGRVDEAFELFDEM 33 (34)
T ss_pred HHHCCCHHHHHHHHHhC
Confidence 56789999999998775
No 269
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=53.74 E-value=1.1e+02 Score=24.78 Aligned_cols=80 Identities=11% Similarity=0.140 Sum_probs=44.1
Q ss_pred HHHhhhchhHHHHHHH--HHHH-HHHHHHhh-cc--chhH-HHHHHHHHHHHHhhhhHHHHHhhcccccccchhhhHHHH
Q 017592 234 ILVDTAGRKLSITIMF--TLSC-LFLLPLVT-YQ--SNIL-TTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAA 306 (369)
Q Consensus 234 ~l~dr~GRR~~~~~~~--~~~~-~~~~~~~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~~g~~ 306 (369)
.++||+-||..+..+. +++. ++.+.++. .. .... ...++....++..+..++.|.+.+--.-.+..++-.|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 5679999998776542 2222 22211111 11 1111 112222222334556678899999999888888888887
Q ss_pred HHHHHHH
Q 017592 307 NAMGRIG 313 (369)
Q Consensus 307 ~~~~~i~ 313 (369)
..--+++
T Consensus 136 e~~~N~~ 142 (153)
T PF11947_consen 136 EFKRNWG 142 (153)
T ss_pred HHHHhHH
Confidence 7655443
No 270
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=53.09 E-value=2.3e+02 Score=27.73 Aligned_cols=38 Identities=3% Similarity=-0.046 Sum_probs=32.3
Q ss_pred hHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 017592 17 LSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 54 (369)
Q Consensus 17 ~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~ 54 (369)
..+..|...+++-.+...++.++-++|.++++.+...+
T Consensus 151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999988665553
No 271
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=51.70 E-value=14 Score=28.39 Aligned_cols=31 Identities=6% Similarity=0.134 Sum_probs=16.9
Q ss_pred HHHHhhccCChhhHhhcCChHHHHHHHHHHH
Q 017592 75 LAFLGFQPESPRYLCLKGRTAEAHRALEKIA 105 (369)
Q Consensus 75 ~~~~~~lpESP~~l~~~g~~~~A~~~l~~~~ 105 (369)
++.++.+|+-|.-...++..+.+.+.+++++
T Consensus 57 i~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 57 IILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 4456678888854333333344555555554
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=51.03 E-value=2.4e+02 Score=27.27 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=59.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchhHHHHHHHHHHHHHHH----HHhhccch--hHHHHHHHHHHHHH-hhhhH---HHHH
Q 017592 219 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLL----PLVTYQSN--ILTTGLLFGARMCV-MGAFT---VSLI 288 (369)
Q Consensus 219 ~i~~~~~~~g~i~~~~l~dr~GRR~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~-~~~~~---~~~~ 288 (369)
.+..+.++.|.++..++.+|+|-.+.=.++...-..++. ......++ ......++.+.... .|.|+ ....
T Consensus 300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~q 379 (432)
T PF06963_consen 300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQ 379 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 355667888899999999999988765554432221111 11122221 22222222211111 23333 3456
Q ss_pred hhcccccccchhhhHHHHHHHHHHHHHHHH
Q 017592 289 YAAEIYPTSVRSTGAGAANAMGRIGGMVCP 318 (369)
Q Consensus 289 ~~~ElfPt~vR~~~~g~~~~~~~i~~~~~p 318 (369)
+.=|.-|.+.|++-.|.-+....+...+.-
T Consensus 380 i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 380 IMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred hhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 777999999999999999999887776654
No 273
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=47.22 E-value=28 Score=26.95 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=21.9
Q ss_pred HHHHHHHHhccCCCchhhHhhhhHH-----HHH-HHHHHhhccCChhhH
Q 017592 46 SEAIGAWIIMPRLDWRWLLGLSSIP-----SFI-LLAFLGFQPESPRYL 88 (369)
Q Consensus 46 ~~~~~~~~~~~~~~WR~~~~~~~ip-----~~i-~~~~~~~lpESP~~l 88 (369)
.+++..++-.+.+-.|+.+.+..+. .++ -++.++.+|+-|.-.
T Consensus 17 caGlA~y~gi~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~~ 65 (121)
T TIGR02978 17 CAGLADYFGVEVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPINL 65 (121)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcccc
Confidence 3333333333445567766554432 222 244566789888543
No 274
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=46.04 E-value=40 Score=26.70 Aligned_cols=22 Identities=23% Similarity=0.371 Sum_probs=17.4
Q ss_pred hcccccccchhhhHHHHHHHHH
Q 017592 290 AAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 290 ~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
..|+||+.+|....+..+...+
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 4699999999988887765543
No 275
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=45.16 E-value=65 Score=32.99 Aligned_cols=70 Identities=13% Similarity=0.067 Sum_probs=43.0
Q ss_pred eccCc-chhhHhHhhhcCCCc---chhHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCchhhHhhhhHHHHHHHHH
Q 017592 9 ERRCG-HVFLSWFLEFVPPSN---RGMWMVIFSSFWTIGSVSEAIGAWIIMP-------RLDWRWLLGLSSIPSFILLAF 77 (369)
Q Consensus 9 G~g~~-~~~~~y~~E~~p~~~---Rg~~~~~~~~~~~~G~l~~~~~~~~~~~-------~~~WR~~~~~~~ip~~i~~~~ 77 (369)
|.|+. +...+...+-.+++. |..+..++..+.++|.+++..+.-.+.. ..+|...|.+.++..++.+++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 34443 667778887666543 4455566666677787776554433321 236999998887766665544
Q ss_pred H
Q 017592 78 L 78 (369)
Q Consensus 78 ~ 78 (369)
.
T Consensus 178 f 178 (654)
T TIGR00926 178 F 178 (654)
T ss_pred H
Confidence 3
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.65 E-value=3.4e+02 Score=26.71 Aligned_cols=40 Identities=10% Similarity=0.001 Sum_probs=32.4
Q ss_pred hHhHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017592 17 LSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP 56 (369)
Q Consensus 17 ~~y~~E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~~~~ 56 (369)
..+..|+.+.++-.+.-.++..+-++|.++++.+......
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999998999999999999999988766555433
No 277
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=42.34 E-value=98 Score=20.32 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHHHhhccCCh
Q 017592 43 GSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESP 85 (369)
Q Consensus 43 G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESP 85 (369)
|.+++.+.+......++.+....++.+.+++...+-..+|..|
T Consensus 14 ~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 14 GEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4444444444434467888888888888887776666666654
No 278
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=41.78 E-value=35 Score=27.12 Aligned_cols=22 Identities=14% Similarity=0.066 Sum_probs=17.2
Q ss_pred hcccccccchhhhHHHHHHHHH
Q 017592 290 AAEIYPTSVRSTGAGAANAMGR 311 (369)
Q Consensus 290 ~~ElfPt~vR~~~~g~~~~~~~ 311 (369)
..|+||+.+|....+..+...+
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 4699999999988777765543
No 279
>PF01535 PPR: PPR repeat; InterPro: IPR002885 This entry represents the PPR repeat. Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins. Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see PDOC50005 from PROSITEDOC) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ]. Examples of PPR repeat-containing proteins include PET309 P32522 from SWISSPROT, which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein O49549 from SWISSPROT that has a domain organisation similar to the human BRCA1 protein.
Probab=41.63 E-value=25 Score=18.81 Aligned_cols=19 Identities=21% Similarity=0.492 Sum_probs=15.3
Q ss_pred HhhcCChHHHHHHHHHHHH
Q 017592 88 LCLKGRTAEAHRALEKIAQ 106 (369)
Q Consensus 88 l~~~g~~~~A~~~l~~~~~ 106 (369)
+.+.|+.++|.+.++++.+
T Consensus 10 ~~~~~~~~~a~~~~~~M~~ 28 (31)
T PF01535_consen 10 YCKMGQFEEALEVFDEMRE 28 (31)
T ss_pred HHccchHHHHHHHHHHHhH
Confidence 3467889999999988854
No 280
>PRK03612 spermidine synthase; Provisional
Probab=41.33 E-value=3.7e+02 Score=26.69 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 017592 301 TGAGAANAMGRIGGMVCPLVAVAL 324 (369)
Q Consensus 301 ~~~g~~~~~~~i~~~~~p~~~~~l 324 (369)
...|-.++++.+|++++++..+++
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHH
Confidence 445666777777777777665543
No 281
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=40.82 E-value=44 Score=33.11 Aligned_cols=62 Identities=18% Similarity=0.279 Sum_probs=42.3
Q ss_pred hhHhHhhhcCCCcchhHHHHHHH-HHHHHHHHHHHHHHHhccCCCchhhHhhhhHHHHHHHHH
Q 017592 16 FLSWFLEFVPPSNRGMWMVIFSS-FWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 77 (369)
Q Consensus 16 ~~~y~~E~~p~~~Rg~~~~~~~~-~~~~G~l~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 77 (369)
..+|++-.+||+.|..+.++++. +..+|--++++++.......+=|..|-..++-+++.+..
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHH
Confidence 44699999999999999888776 445665566655555555567777776666555554433
No 282
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=39.58 E-value=19 Score=24.02 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=17.0
Q ss_pred cCCCchhhHhhhhHHH----HHHHHHHhhccCCh
Q 017592 56 PRLDWRWLLGLSSIPS----FILLAFLGFQPESP 85 (369)
Q Consensus 56 ~~~~WR~~~~~~~ip~----~i~~~~~~~lpESP 85 (369)
+..-+|..|.+..+.. ++-++.+..+|+.|
T Consensus 27 d~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 27 DPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred CHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 4455777776655422 22244456788876
No 283
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=39.18 E-value=3.5e+02 Score=25.84 Aligned_cols=121 Identities=16% Similarity=0.171 Sum_probs=52.2
Q ss_pred hhhHHHHHHHHHhhh--chhHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhhhHHHHHhhcccccccchhhh
Q 017592 225 EIPGLLLAAILVDTA--GRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 302 (369)
Q Consensus 225 ~~~g~i~~~~l~dr~--GRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~~ 302 (369)
.++.-+++.+.++|+ .+|.+....+...++.+. .+..+.+...+...++ ....+...+...-.+..||... -
T Consensus 72 ~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~v--a~~~~v~~~l~Gv~la-s~ssg~GE~tfL~lt~~y~~~~---l 145 (402)
T PF02487_consen 72 SLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLV--AFSPSVWVRLLGVVLA-SLSSGLGEVTFLSLTHFYGKSS---L 145 (402)
T ss_pred HHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhe--eeccchhHHHHHHHHH-hhhhhhhHHHHHHHHHhcCccc---c
Confidence 444556678889986 566666554444443332 2222222221111111 1223334455555556777532 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHhcc
Q 017592 303 AGAANAMGRIGGMVCPLVAVALVA-NCHQMTAVVLLVVVIVTSILSVMLIP 352 (369)
Q Consensus 303 ~g~~~~~~~i~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~ 352 (369)
.+++.+.| .++++++.....+.. ..+...+...+..+.++..+..++.+
T Consensus 146 ~~wssGTG-~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 146 SAWSSGTG-GAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred ccccCCcC-hhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333322 223344433333333 12233445555554444443434444
No 284
>TIGR00756 PPR pentatricopeptide repeat domain (PPR motif). This family has a similar consensus to the TPR domain (tetratricopeptide), pfam pfam00515, a 33-residue repeat. It is predicted to form a pair of antiparallel helices similar to that of TPR.
Probab=38.90 E-value=43 Score=18.20 Aligned_cols=19 Identities=32% Similarity=0.615 Sum_probs=16.2
Q ss_pred HhhcCChHHHHHHHHHHHH
Q 017592 88 LCLKGRTAEAHRALEKIAQ 106 (369)
Q Consensus 88 l~~~g~~~~A~~~l~~~~~ 106 (369)
+.+.|+.++|.+.++++.+
T Consensus 10 ~~~~~~~~~a~~~~~~M~~ 28 (35)
T TIGR00756 10 LCKAGRVEEALELFKEMLE 28 (35)
T ss_pred HHHCCCHHHHHHHHHHHHH
Confidence 4578999999999999865
No 285
>PF13041 PPR_2: PPR repeat family
Probab=38.41 E-value=37 Score=21.04 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=17.3
Q ss_pred hHhhcCChHHHHHHHHHHHHH
Q 017592 87 YLCLKGRTAEAHRALEKIAQV 107 (369)
Q Consensus 87 ~l~~~g~~~~A~~~l~~~~~~ 107 (369)
.+.++|+.++|.++++++.+.
T Consensus 12 ~~~~~~~~~~a~~l~~~M~~~ 32 (50)
T PF13041_consen 12 GYCKAGKFEEALKLFKEMKKR 32 (50)
T ss_pred HHHHCcCHHHHHHHHHHHHHc
Confidence 356789999999999999753
No 286
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=35.44 E-value=63 Score=19.39 Aligned_cols=21 Identities=24% Similarity=0.252 Sum_probs=17.1
Q ss_pred hHhhcCChHHHHHHHHHHHHH
Q 017592 87 YLCLKGRTAEAHRALEKIAQV 107 (369)
Q Consensus 87 ~l~~~g~~~~A~~~l~~~~~~ 107 (369)
.+...|+.++|++.+++.-+.
T Consensus 10 ~~~~~G~~~~A~~~~~~~l~~ 30 (44)
T PF13428_consen 10 AYRRLGQPDEAERLLRRALAL 30 (44)
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 456789999999999997554
No 287
>COG4708 Predicted membrane protein [Function unknown]
Probab=34.30 E-value=58 Score=25.87 Aligned_cols=28 Identities=29% Similarity=0.602 Sum_probs=23.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhchhH
Q 017592 216 IDEFITSLAEIPGLLLAAILVDTAGRKL 243 (369)
Q Consensus 216 ~~~~i~~~~~~~g~i~~~~l~dr~GRR~ 243 (369)
+.-...++++++++.++++++|++|+|.
T Consensus 138 ltw~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 138 LTWFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 3345667889999999999999999995
No 288
>PRK10263 DNA translocase FtsK; Provisional
Probab=33.73 E-value=7.3e+02 Score=27.88 Aligned_cols=22 Identities=36% Similarity=0.454 Sum_probs=15.0
Q ss_pred HHHhhhhhHHHHHHHHHhhhch
Q 017592 220 ITSLAEIPGLLLAAILVDTAGR 241 (369)
Q Consensus 220 i~~~~~~~g~i~~~~l~dr~GR 241 (369)
+.|.++.+|..++.++..-||-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3466677777777777777774
No 289
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=31.86 E-value=4.8e+02 Score=25.22 Aligned_cols=52 Identities=10% Similarity=0.137 Sum_probs=30.9
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 017592 296 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 347 (369)
Q Consensus 296 t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 347 (369)
...++...+...-+--+..+++|++.+.+++..+......+.++..+++..+
T Consensus 144 ~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 144 PGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 3444444444444455688999999988777555544455555555544433
No 290
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=31.73 E-value=64 Score=17.56 Aligned_cols=19 Identities=11% Similarity=0.232 Sum_probs=15.7
Q ss_pred hhcCChHHHHHHHHHHHHH
Q 017592 89 CLKGRTAEAHRALEKIAQV 107 (369)
Q Consensus 89 ~~~g~~~~A~~~l~~~~~~ 107 (369)
.+.|+.++|.++++++.+.
T Consensus 12 ~~~g~~~~a~~~~~~M~~~ 30 (34)
T PF13812_consen 12 AKAGDPDAALQLFDEMKEQ 30 (34)
T ss_pred HHCCCHHHHHHHHHHHHHh
Confidence 4578899999999998763
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.55 E-value=1.4e+02 Score=22.58 Aligned_cols=21 Identities=24% Similarity=0.113 Sum_probs=15.2
Q ss_pred HHHHHHHhhh-chhHHHHHHHH
Q 017592 230 LLAAILVDTA-GRKLSITIMFT 250 (369)
Q Consensus 230 i~~~~l~dr~-GRR~~~~~~~~ 250 (369)
...|++.||+ |.+++-++.++
T Consensus 60 a~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHH
Confidence 3568999996 88888665444
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.40 E-value=2.3e+02 Score=21.40 Aligned_cols=52 Identities=8% Similarity=0.057 Sum_probs=32.1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH--HHHHHHHHHHHHHH
Q 017592 296 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTA--VVLLVVVIVTSILS 347 (369)
Q Consensus 296 t~vR~~~~g~~~~~~~i~~~~~p~~~~~l~~~~~~~~~--~~~~~~~~~i~~~~ 347 (369)
++.++.+.++-...-.+++++....++++++.+....| .+++..+.+.+++.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 45677777777766677777777777888886543333 34444444544444
No 293
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=28.13 E-value=44 Score=17.57 Aligned_cols=14 Identities=36% Similarity=0.458 Sum_probs=11.0
Q ss_pred hhcCChHHHHHHHH
Q 017592 89 CLKGRTAEAHRALE 102 (369)
Q Consensus 89 ~~~g~~~~A~~~l~ 102 (369)
...|+.++|+..++
T Consensus 12 ~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 12 LAQGDPDEAERLLR 25 (26)
T ss_pred HHcCCHHHHHHHHh
Confidence 46899999987764
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=25.65 E-value=6.1e+02 Score=24.44 Aligned_cols=28 Identities=39% Similarity=0.388 Sum_probs=17.2
Q ss_pred HHHHHHh-----hhchhHHHHHH-HHHHHHHHHH
Q 017592 231 LAAILVD-----TAGRKLSITIM-FTLSCLFLLP 258 (369)
Q Consensus 231 ~~~~l~d-----r~GRR~~~~~~-~~~~~~~~~~ 258 (369)
+-..++| |+|||+..++- ..+.+.++..
T Consensus 82 lWaPiVDs~y~k~~GrrksWvvp~q~llG~~mll 115 (510)
T KOG3574|consen 82 LWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLL 115 (510)
T ss_pred HHHhhhHHHHHHhhccccceeeehHHHHHHHHHH
Confidence 4556677 99999987653 3333444433
No 295
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.86 E-value=1.2e+02 Score=30.05 Aligned_cols=56 Identities=18% Similarity=0.345 Sum_probs=35.2
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHH---hccCCCchhhHhhhh--HHHHHHHHH
Q 017592 22 EFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI---IMPRLDWRWLLGLSS--IPSFILLAF 77 (369)
Q Consensus 22 E~~p~~~Rg~~~~~~~~~~~~G~l~~~~~~~~---~~~~~~WR~~~~~~~--ip~~i~~~~ 77 (369)
-+..|..||...+.....+.++.+.++-++.- ......|+...+..+ .|++++.+.
T Consensus 354 GflSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk~~~g~~wk~~~~lta~l~PGivf~~~ 414 (628)
T KOG1278|consen 354 GFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYKTFKGREWKRNAILTAFLFPGIVFAIF 414 (628)
T ss_pred ccCCccccccHHHHHHHHHHHHHHhhhhhhhhhHhhhcCCcchhhHHhhhhhcchHHHHHH
Confidence 55666778988888778887777766544322 223457887655443 377666543
No 296
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=22.73 E-value=2.3e+02 Score=18.56 Aligned_cols=18 Identities=6% Similarity=0.054 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 017592 176 FGNSFAYYAVVLLISELS 193 (369)
Q Consensus 176 ~~~~~~~y~~~~~~~~l~ 193 (369)
....++-||..+|..++.
T Consensus 33 ~v~~Vg~YGF~VWm~Q~~ 50 (56)
T PF06796_consen 33 AVAFVGGYGFIVWMYQIF 50 (56)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345667899999887653
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.02 E-value=6.1e+02 Score=23.13 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=13.5
Q ss_pred HHHHHHHhhhchhHHHH
Q 017592 230 LLAAILVDTAGRKLSIT 246 (369)
Q Consensus 230 i~~~~l~dr~GRR~~~~ 246 (369)
.+.+-++||-|||+..+
T Consensus 90 tivgSLaDkqGRKracv 106 (454)
T KOG4332|consen 90 TIVGSLADKQGRKRACV 106 (454)
T ss_pred HHHHHHHhhhcccccee
Confidence 45677899999998654
No 298
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=21.81 E-value=7.1e+02 Score=23.84 Aligned_cols=26 Identities=12% Similarity=0.199 Sum_probs=19.5
Q ss_pred HHHHHhhcccccccchhhhHHHHHHH
Q 017592 284 TVSLIYAAEIYPTSVRSTGAGAANAM 309 (369)
Q Consensus 284 ~~~~~~~~ElfPt~vR~~~~g~~~~~ 309 (369)
++...+.++-.|++.+-.+..+....
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~f 387 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFF 387 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHH
Confidence 46778999999998887776665543
No 299
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=21.33 E-value=8.5e+02 Score=24.54 Aligned_cols=28 Identities=36% Similarity=0.398 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHhh-hchhHHHHHHHHHH
Q 017592 225 EIPGLLLAAILVDT-AGRKLSITIMFTLS 252 (369)
Q Consensus 225 ~~~g~i~~~~l~dr-~GRR~~~~~~~~~~ 252 (369)
.....+++++++|- +||-+.+.++.++.
T Consensus 86 ~~~~~l~g~~laD~f~gry~tI~~~s~i~ 114 (571)
T KOG1237|consen 86 QFLLPLLGAFLADSFLGRYFTINIGSLIS 114 (571)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34556789999997 59999887765443
No 300
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=21.08 E-value=2.1e+02 Score=17.49 Aligned_cols=18 Identities=6% Similarity=0.036 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 017592 176 FGNSFAYYAVVLLISELS 193 (369)
Q Consensus 176 ~~~~~~~y~~~~~~~~l~ 193 (369)
....++-||..+|..++.
T Consensus 20 sV~~V~~YGF~vWm~Q~~ 37 (42)
T TIGR02973 20 SVITVGGYGFAVWMYQIL 37 (42)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 345667899999887653
No 301
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=20.98 E-value=32 Score=31.36 Aligned_cols=10 Identities=40% Similarity=0.614 Sum_probs=8.6
Q ss_pred hhccCChhhH
Q 017592 79 GFQPESPRYL 88 (369)
Q Consensus 79 ~~lpESP~~l 88 (369)
+.+||||||.
T Consensus 202 LsmPhSPRWh 211 (335)
T TIGR03032 202 LSMPHSPRWY 211 (335)
T ss_pred ccCCcCCcEe
Confidence 4699999996
No 302
>TIGR02972 TMAO_torE trimethylamine N-oxide reductase system, TorE protein. Members of this small, apparent transmembrane protein are designated TorE and occur in operons for the trimethylamine N-oxide (TMAO) reductase system. Members are closely related to the NapE protein of the related periplasmic nitrate reductase system. It may be that TorE is an integral membrane subunit of a complex with the reductase TorA.
Probab=20.33 E-value=2.4e+02 Score=17.75 Aligned_cols=18 Identities=6% Similarity=0.067 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 017592 176 FGNSFAYYAVVLLISELS 193 (369)
Q Consensus 176 ~~~~~~~y~~~~~~~~l~ 193 (369)
....++-||..+|..++.
T Consensus 25 sV~~Vg~YGF~vWm~Q~~ 42 (47)
T TIGR02972 25 SVAGIGGYGFIIWMIQAF 42 (47)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345667899999887654
Done!