Query 017595
Match_columns 369
No_of_seqs 179 out of 2042
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:58:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017595.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017595hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 6.8E-56 2.3E-60 417.0 32.4 332 23-369 4-345 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 2.4E-54 8.3E-59 408.1 37.8 347 22-369 15-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 5.2E-54 1.8E-58 406.5 38.0 348 22-369 16-366 (368)
4 3lst_A CALO1 methyltransferase 100.0 2.9E-50 1E-54 378.5 33.5 339 9-369 3-347 (348)
5 3gwz_A MMCR; methyltransferase 100.0 5.1E-50 1.8E-54 379.6 31.9 339 9-369 20-368 (369)
6 1zg3_A Isoflavanone 4'-O-methy 100.0 2.5E-48 8.5E-53 366.8 32.8 341 23-369 6-358 (358)
7 1fp1_D Isoliquiritigenin 2'-O- 100.0 3.9E-48 1.3E-52 367.3 32.7 345 24-369 19-372 (372)
8 3i53_A O-methyltransferase; CO 100.0 8E-49 2.7E-53 366.5 26.4 316 29-369 7-331 (332)
9 1fp2_A Isoflavone O-methyltran 100.0 6.1E-48 2.1E-52 363.3 31.9 336 23-369 12-352 (352)
10 2ip2_A Probable phenazine-spec 100.0 3.1E-47 1.1E-51 356.1 32.0 319 26-369 7-333 (334)
11 3dp7_A SAM-dependent methyltra 100.0 4.1E-45 1.4E-49 345.2 25.7 325 23-369 11-354 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 9.7E-45 3.3E-49 344.3 25.3 324 25-369 14-355 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 5.3E-44 1.8E-48 337.5 25.9 324 25-369 17-355 (360)
14 2r3s_A Uncharacterized protein 100.0 3.1E-43 1.1E-47 328.9 27.4 315 29-368 8-333 (335)
15 1x19_A CRTF-related protein; m 100.0 9.7E-43 3.3E-47 328.7 29.5 311 25-369 28-358 (359)
16 3mcz_A O-methyltransferase; ad 100.0 6.9E-43 2.4E-47 328.9 25.5 316 23-369 20-348 (352)
17 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.7E-21 6E-26 174.7 17.9 164 205-369 69-256 (261)
18 3dtn_A Putative methyltransfer 99.8 1.1E-19 3.6E-24 160.5 18.0 174 195-369 33-225 (234)
19 3dlc_A Putative S-adenosyl-L-m 99.8 2.1E-19 7.1E-24 156.5 9.6 169 194-368 33-213 (219)
20 3hnr_A Probable methyltransfer 99.8 3.4E-18 1.2E-22 149.3 14.1 169 196-369 36-211 (220)
21 3dh0_A SAM dependent methyltra 99.8 5.6E-18 1.9E-22 147.8 12.8 155 195-369 27-192 (219)
22 3ujc_A Phosphoethanolamine N-m 99.7 8.5E-18 2.9E-22 150.9 13.6 156 194-359 44-207 (266)
23 1ve3_A Hypothetical protein PH 99.7 5.2E-18 1.8E-22 148.7 11.3 170 193-369 28-226 (227)
24 3dli_A Methyltransferase; PSI- 99.7 3.4E-17 1.2E-21 145.0 15.9 150 195-359 30-185 (240)
25 3ou2_A SAM-dependent methyltra 99.7 1.3E-17 4.3E-22 145.2 12.9 159 194-357 34-204 (218)
26 1kpg_A CFA synthase;, cyclopro 99.7 2.5E-17 8.5E-22 149.9 14.5 163 194-359 53-229 (287)
27 1vl5_A Unknown conserved prote 99.7 1.4E-17 4.9E-22 149.2 12.5 155 193-358 25-190 (260)
28 3hem_A Cyclopropane-fatty-acyl 99.7 1E-16 3.6E-21 146.9 16.4 164 194-360 61-245 (302)
29 3bus_A REBM, methyltransferase 99.7 5.1E-17 1.8E-21 146.6 14.1 157 194-359 50-217 (273)
30 2fk8_A Methoxy mycolic acid sy 99.7 1.4E-16 4.7E-21 147.2 17.0 163 194-359 79-255 (318)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.5E-17 5.1E-22 148.4 9.3 149 195-359 83-239 (254)
32 2o57_A Putative sarcosine dime 99.7 1E-16 3.5E-21 146.5 14.4 155 194-359 67-235 (297)
33 3pfg_A N-methyltransferase; N, 99.7 1.2E-17 4.1E-22 150.0 7.9 162 206-369 50-248 (263)
34 1xxl_A YCGJ protein; structura 99.7 8.9E-17 3E-21 142.3 13.3 153 195-358 11-174 (239)
35 2qe6_A Uncharacterized protein 99.7 1.8E-16 6.3E-21 143.1 15.3 140 206-354 77-238 (274)
36 3h2b_A SAM-dependent methyltra 99.7 2.7E-17 9.3E-22 141.7 9.0 144 207-366 42-191 (203)
37 3vc1_A Geranyl diphosphate 2-C 99.7 2.2E-16 7.6E-21 145.4 15.5 163 186-359 97-270 (312)
38 3ege_A Putative methyltransfer 99.7 2.5E-16 8.6E-21 141.3 14.5 152 195-359 24-179 (261)
39 3mgg_A Methyltransferase; NYSG 99.7 6.2E-17 2.1E-21 146.3 10.5 151 204-358 35-198 (276)
40 3f4k_A Putative methyltransfer 99.7 1.5E-16 5.1E-21 142.1 12.3 152 195-359 35-197 (257)
41 1nkv_A Hypothetical protein YJ 99.7 1.1E-16 3.7E-21 143.0 11.1 153 194-358 25-187 (256)
42 3ocj_A Putative exported prote 99.7 9.1E-17 3.1E-21 147.5 10.9 166 204-369 116-303 (305)
43 3kkz_A Uncharacterized protein 99.7 1.6E-16 5.5E-21 143.0 11.9 151 196-359 36-197 (267)
44 3gu3_A Methyltransferase; alph 99.7 2.1E-16 7.2E-21 143.6 12.2 160 196-357 12-189 (284)
45 3e23_A Uncharacterized protein 99.7 1.2E-16 4.2E-21 138.5 10.0 138 205-359 42-183 (211)
46 3bxo_A N,N-dimethyltransferase 99.7 7.7E-17 2.6E-21 142.3 8.6 163 205-369 39-238 (239)
47 3g2m_A PCZA361.24; SAM-depende 99.7 1.7E-16 5.9E-21 145.3 10.7 173 192-368 70-290 (299)
48 2ex4_A Adrenal gland protein A 99.7 9.3E-17 3.2E-21 142.3 8.6 138 206-359 79-226 (241)
49 2p7i_A Hypothetical protein; p 99.7 1.8E-16 6E-21 140.7 10.0 147 206-358 42-199 (250)
50 3l8d_A Methyltransferase; stru 99.7 6.8E-16 2.3E-20 136.6 13.6 141 206-358 53-200 (242)
51 3i9f_A Putative type 11 methyl 99.7 7.9E-17 2.7E-21 134.8 7.1 145 198-368 10-158 (170)
52 3lcc_A Putative methyl chlorid 99.7 3.2E-16 1.1E-20 138.3 10.9 131 208-359 68-208 (235)
53 1pjz_A Thiopurine S-methyltran 99.7 2.3E-16 7.8E-21 136.2 9.6 142 196-359 13-177 (203)
54 3bkx_A SAM-dependent methyltra 99.7 1.6E-15 5.4E-20 136.9 15.3 161 195-358 33-219 (275)
55 4fsd_A Arsenic methyltransfera 99.7 5.2E-16 1.8E-20 147.0 12.4 144 205-357 82-250 (383)
56 3sm3_A SAM-dependent methyltra 99.6 4E-16 1.4E-20 137.2 10.5 149 205-358 29-207 (235)
57 2qm3_A Predicted methyltransfe 99.6 7.9E-16 2.7E-20 145.2 13.1 215 51-305 47-279 (373)
58 3jwh_A HEN1; methyltransferase 99.6 7.1E-16 2.4E-20 134.3 11.8 142 205-354 28-188 (217)
59 3jwg_A HEN1, methyltransferase 99.6 7.3E-16 2.5E-20 134.4 11.6 142 205-354 28-188 (219)
60 3ccf_A Cyclopropane-fatty-acyl 99.6 1.2E-15 4.1E-20 138.2 12.5 155 195-359 47-211 (279)
61 2p35_A Trans-aconitate 2-methy 99.6 7.7E-16 2.6E-20 137.6 10.5 155 195-353 23-185 (259)
62 3bkw_A MLL3908 protein, S-aden 99.6 2.8E-15 9.5E-20 132.6 13.7 159 196-358 34-214 (243)
63 4htf_A S-adenosylmethionine-de 99.6 1.9E-15 6.6E-20 137.2 12.2 157 194-359 58-233 (285)
64 3g5l_A Putative S-adenosylmeth 99.6 1.8E-15 6.3E-20 134.8 11.6 161 195-359 34-217 (253)
65 3cgg_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 126.9 12.9 132 196-358 38-175 (195)
66 3ggd_A SAM-dependent methyltra 99.6 1.3E-15 4.4E-20 135.1 10.3 147 204-357 54-218 (245)
67 1vlm_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 129.5 13.4 137 207-358 48-188 (219)
68 2xvm_A Tellurite resistance pr 99.6 3.5E-15 1.2E-19 127.7 11.9 142 196-358 23-173 (199)
69 2yqz_A Hypothetical protein TT 99.6 2.7E-15 9.3E-20 134.3 11.6 146 204-356 37-194 (263)
70 2zfu_A Nucleomethylin, cerebra 99.6 3.8E-15 1.3E-19 129.4 12.2 132 195-369 56-190 (215)
71 1y8c_A S-adenosylmethionine-de 99.6 2.6E-15 8.9E-20 132.9 9.7 162 206-369 37-244 (246)
72 3d2l_A SAM-dependent methyltra 99.6 6.1E-15 2.1E-19 130.4 12.1 94 206-302 33-136 (243)
73 3g07_A 7SK snRNA methylphospha 99.6 7.3E-16 2.5E-20 140.6 5.5 145 206-358 46-269 (292)
74 3e8s_A Putative SAM dependent 99.6 1.1E-15 3.8E-20 133.5 5.9 153 196-357 43-208 (227)
75 3cc8_A Putative methyltransfer 99.6 2.8E-15 9.6E-20 131.2 7.4 154 195-359 23-186 (230)
76 4hg2_A Methyltransferase type 99.6 1.3E-14 4.3E-19 129.6 11.3 97 206-307 39-139 (257)
77 2aot_A HMT, histamine N-methyl 99.5 1.7E-14 5.7E-19 131.6 11.0 140 205-355 51-218 (292)
78 2gb4_A Thiopurine S-methyltran 99.5 2.5E-14 8.7E-19 127.3 10.6 133 205-358 67-227 (252)
79 3giw_A Protein of unknown func 99.5 1.1E-13 3.6E-18 123.2 14.2 141 206-354 78-243 (277)
80 2p8j_A S-adenosylmethionine-de 99.5 1.9E-15 6.5E-20 130.6 2.6 150 205-355 22-180 (209)
81 3g5t_A Trans-aconitate 3-methy 99.5 3.5E-14 1.2E-18 129.8 9.3 138 205-351 35-197 (299)
82 3q87_B N6 adenine specific DNA 99.5 3.1E-13 1.1E-17 113.0 13.9 118 206-359 23-150 (170)
83 1ri5_A MRNA capping enzyme; me 99.5 1.2E-13 4.2E-18 125.8 12.3 149 205-359 63-251 (298)
84 3thr_A Glycine N-methyltransfe 99.5 2.7E-14 9.4E-19 130.0 7.8 98 205-304 56-176 (293)
85 2i62_A Nicotinamide N-methyltr 99.5 2.7E-14 9.2E-19 127.9 7.4 140 205-359 55-240 (265)
86 3m70_A Tellurite resistance pr 99.5 8.9E-14 3E-18 126.2 10.7 140 196-356 111-258 (286)
87 1wzn_A SAM-dependent methyltra 99.5 8.8E-13 3E-17 117.2 16.8 107 194-303 30-145 (252)
88 4e2x_A TCAB9; kijanose, tetron 99.5 6.6E-14 2.2E-18 134.1 9.8 151 193-359 95-254 (416)
89 2a14_A Indolethylamine N-methy 99.5 1.3E-14 4.4E-19 130.3 4.5 139 205-358 54-238 (263)
90 3ofk_A Nodulation protein S; N 99.5 1.7E-14 5.7E-19 125.4 4.7 100 204-305 49-156 (216)
91 3grz_A L11 mtase, ribosomal pr 99.5 8.9E-14 3E-18 119.8 8.6 130 205-369 59-196 (205)
92 1fbn_A MJ fibrillarin homologu 99.5 5.5E-13 1.9E-17 117.1 13.7 141 204-369 72-227 (230)
93 2b3t_A Protein methyltransfera 99.5 6.3E-13 2.1E-17 120.1 14.4 144 194-369 99-275 (276)
94 2kw5_A SLR1183 protein; struct 99.5 2.1E-13 7.2E-18 117.1 10.7 131 209-358 32-171 (202)
95 2gs9_A Hypothetical protein TT 99.5 2E-13 6.8E-18 118.1 10.0 141 196-356 28-176 (211)
96 3e05_A Precorrin-6Y C5,15-meth 99.5 7.8E-13 2.7E-17 113.8 13.3 124 196-355 31-164 (204)
97 2g72_A Phenylethanolamine N-me 99.4 4.6E-14 1.6E-18 128.4 5.1 139 206-359 71-257 (289)
98 3mq2_A 16S rRNA methyltransfer 99.4 1.5E-13 5.1E-18 119.6 7.8 143 204-359 25-185 (218)
99 1dus_A MJ0882; hypothetical pr 99.4 7.2E-13 2.5E-17 112.5 11.6 141 195-369 42-193 (194)
100 3orh_A Guanidinoacetate N-meth 99.4 3.3E-14 1.1E-18 125.5 2.9 133 205-355 59-207 (236)
101 4dzr_A Protein-(glutamine-N5) 99.4 8.5E-14 2.9E-18 120.4 5.3 145 195-368 19-203 (215)
102 3uwp_A Histone-lysine N-methyl 99.4 4.1E-13 1.4E-17 125.3 10.1 113 194-310 162-295 (438)
103 3p2e_A 16S rRNA methylase; met 99.4 7.8E-13 2.7E-17 115.7 11.2 145 205-359 23-186 (225)
104 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.3E-12 4.4E-17 109.6 11.8 102 196-305 16-129 (178)
105 4df3_A Fibrillarin-like rRNA/T 99.4 7.4E-12 2.5E-16 109.2 12.8 140 204-367 75-229 (233)
106 1zx0_A Guanidinoacetate N-meth 99.3 2.9E-13 1E-17 119.3 3.8 100 205-305 59-172 (236)
107 1af7_A Chemotaxis receptor met 99.3 8.5E-13 2.9E-17 118.5 6.8 96 206-301 105-250 (274)
108 3iv6_A Putative Zn-dependent a 99.3 1.9E-12 6.5E-17 115.2 8.5 108 194-305 34-150 (261)
109 1nt2_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.5E-16 106.7 12.8 137 204-369 55-209 (210)
110 3njr_A Precorrin-6Y methylase; 99.3 2.1E-11 7.1E-16 105.0 13.8 121 197-356 47-178 (204)
111 1yzh_A TRNA (guanine-N(7)-)-me 99.3 5.8E-12 2E-16 109.2 10.3 98 206-303 41-156 (214)
112 2pxx_A Uncharacterized protein 99.3 1.8E-12 6.2E-17 112.0 7.0 101 205-306 41-162 (215)
113 2nxc_A L11 mtase, ribosomal pr 99.3 1.6E-12 5.4E-17 116.0 6.7 125 205-365 119-251 (254)
114 3htx_A HEN1; HEN1, small RNA m 99.3 6.4E-12 2.2E-16 125.8 10.8 100 205-305 720-836 (950)
115 1g8a_A Fibrillarin-like PRE-rR 99.3 1.8E-11 6.2E-16 107.0 11.9 141 204-369 71-226 (227)
116 3mti_A RRNA methylase; SAM-dep 99.3 1.2E-11 4E-16 104.6 10.3 133 204-359 20-170 (185)
117 2ipx_A RRNA 2'-O-methyltransfe 99.3 7.4E-12 2.5E-16 110.0 9.3 140 204-367 75-229 (233)
118 3evz_A Methyltransferase; NYSG 99.3 1.1E-11 3.8E-16 108.5 10.2 127 204-359 53-207 (230)
119 3m33_A Uncharacterized protein 99.3 1.8E-12 6.3E-17 113.4 5.1 114 205-358 47-167 (226)
120 2fca_A TRNA (guanine-N(7)-)-me 99.3 8.2E-12 2.8E-16 108.3 9.0 98 206-303 38-153 (213)
121 1yb2_A Hypothetical protein TA 99.3 1.7E-12 5.9E-17 117.1 4.9 125 196-357 101-236 (275)
122 3bwc_A Spermidine synthase; SA 99.3 8.9E-12 3E-16 114.0 9.5 129 205-358 94-240 (304)
123 3mb5_A SAM-dependent methyltra 99.3 7E-12 2.4E-16 111.6 8.5 127 195-358 83-222 (255)
124 1l3i_A Precorrin-6Y methyltran 99.3 6.3E-12 2.2E-16 106.4 7.7 120 197-353 25-155 (192)
125 3eey_A Putative rRNA methylase 99.3 1.1E-11 3.7E-16 105.9 8.6 103 204-306 20-142 (197)
126 4dcm_A Ribosomal RNA large sub 99.2 1E-11 3.6E-16 116.7 8.5 108 196-304 213-335 (375)
127 1xdz_A Methyltransferase GIDB; 99.2 5.1E-12 1.7E-16 111.7 6.0 121 205-358 69-202 (240)
128 3fzg_A 16S rRNA methylase; met 99.2 9.6E-12 3.3E-16 103.9 7.0 140 195-361 41-190 (200)
129 3id6_C Fibrillarin-like rRNA/T 99.2 6.6E-11 2.3E-15 103.4 12.6 141 204-368 74-229 (232)
130 2h00_A Methyltransferase 10 do 99.2 1.2E-12 4E-17 116.7 1.3 145 206-359 65-239 (254)
131 1jsx_A Glucose-inhibited divis 99.2 6.1E-12 2.1E-16 108.3 5.6 91 207-303 66-165 (207)
132 3lpm_A Putative methyltransfer 99.2 4.7E-11 1.6E-15 106.7 11.6 124 204-358 46-201 (259)
133 3fpf_A Mtnas, putative unchara 99.2 1.4E-11 4.8E-16 110.8 8.1 96 204-304 120-223 (298)
134 2avn_A Ubiquinone/menaquinone 99.2 2E-11 6.9E-16 109.1 9.0 97 206-305 54-154 (260)
135 2plw_A Ribosomal RNA methyltra 99.2 5E-11 1.7E-15 102.0 11.1 106 194-303 10-154 (201)
136 2pjd_A Ribosomal RNA small sub 99.2 5.6E-12 1.9E-16 117.5 5.2 110 195-305 186-305 (343)
137 3dxy_A TRNA (guanine-N(7)-)-me 99.2 7.8E-12 2.7E-16 108.8 5.6 99 206-304 34-151 (218)
138 3bgv_A MRNA CAP guanine-N7 met 99.2 3.3E-11 1.1E-15 110.7 10.0 98 206-304 34-156 (313)
139 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.4E-11 4.7E-16 109.8 7.2 127 195-358 86-224 (258)
140 3hp7_A Hemolysin, putative; st 99.2 4.8E-11 1.7E-15 107.4 10.7 150 194-359 73-233 (291)
141 2vdw_A Vaccinia virus capping 99.2 1.7E-11 5.8E-16 112.0 7.9 98 206-304 48-170 (302)
142 3kr9_A SAM-dependent methyltra 99.2 7.5E-11 2.6E-15 102.3 11.4 128 206-368 15-156 (225)
143 3opn_A Putative hemolysin; str 99.2 3.6E-11 1.2E-15 105.5 9.2 151 194-359 25-185 (232)
144 3g89_A Ribosomal RNA small sub 99.2 8.1E-12 2.8E-16 111.0 5.0 122 205-359 79-213 (249)
145 2ld4_A Anamorsin; methyltransf 99.2 1.5E-11 5.2E-16 103.1 6.4 109 204-350 10-128 (176)
146 1ej0_A FTSJ; methyltransferase 99.2 3.8E-11 1.3E-15 100.1 8.8 107 195-305 11-138 (180)
147 3lec_A NADB-rossmann superfami 99.2 1E-10 3.5E-15 101.6 11.5 128 206-368 21-162 (230)
148 2yxd_A Probable cobalt-precorr 99.2 3.6E-11 1.2E-15 101.0 8.5 120 196-355 26-154 (183)
149 1u2z_A Histone-lysine N-methyl 99.2 6.9E-11 2.3E-15 112.3 10.9 111 195-309 232-365 (433)
150 1o9g_A RRNA methyltransferase; 99.2 5.3E-11 1.8E-15 105.7 9.4 109 196-305 42-216 (250)
151 3b3j_A Histone-arginine methyl 99.2 2.8E-11 9.4E-16 117.4 8.0 106 194-301 147-261 (480)
152 3ckk_A TRNA (guanine-N(7)-)-me 99.2 4.8E-11 1.6E-15 105.0 8.3 99 205-303 45-168 (235)
153 2y1w_A Histone-arginine methyl 99.2 2.4E-11 8.2E-16 113.4 6.6 105 196-302 41-154 (348)
154 3duw_A OMT, O-methyltransferas 99.2 2.4E-11 8.2E-16 105.9 5.9 97 205-306 57-170 (223)
155 1o54_A SAM-dependent O-methylt 99.2 2.5E-11 8.7E-16 109.5 6.1 102 195-304 102-214 (277)
156 2yxe_A Protein-L-isoaspartate 99.1 5.7E-11 2E-15 102.8 7.1 101 196-305 68-179 (215)
157 2frn_A Hypothetical protein PH 99.1 9.3E-11 3.2E-15 105.9 8.7 120 205-354 124-253 (278)
158 3p9n_A Possible methyltransfer 99.1 1.2E-10 4.2E-15 98.7 8.9 99 206-306 44-156 (189)
159 3lbf_A Protein-L-isoaspartate 99.1 7.5E-11 2.6E-15 101.7 7.3 99 196-305 68-176 (210)
160 3u81_A Catechol O-methyltransf 99.1 3.7E-11 1.3E-15 104.6 5.4 98 206-306 58-173 (221)
161 2fyt_A Protein arginine N-meth 99.1 1.2E-10 4E-15 108.3 9.0 103 196-300 55-168 (340)
162 3tfw_A Putative O-methyltransf 99.1 1E-10 3.5E-15 103.8 8.3 97 205-306 62-173 (248)
163 3gnl_A Uncharacterized protein 99.1 2.8E-10 9.5E-15 99.7 10.8 128 206-368 21-162 (244)
164 2vdv_E TRNA (guanine-N(7)-)-me 99.1 5.9E-11 2E-15 105.2 6.0 94 205-303 48-173 (246)
165 3sso_A Methyltransferase; macr 99.1 5.1E-11 1.7E-15 111.0 5.3 104 194-305 206-326 (419)
166 2bm8_A Cephalosporin hydroxyla 99.1 2.1E-10 7.3E-15 100.9 8.4 93 207-304 82-188 (236)
167 3r3h_A O-methyltransferase, SA 99.1 4.5E-11 1.5E-15 105.7 3.9 98 206-308 60-175 (242)
168 3ntv_A MW1564 protein; rossman 99.1 6.2E-11 2.1E-15 104.1 4.6 97 205-306 70-179 (232)
169 3q7e_A Protein arginine N-meth 99.1 1.2E-10 4.2E-15 108.5 6.8 96 205-301 65-171 (349)
170 3gjy_A Spermidine synthase; AP 99.1 1.1E-10 3.7E-15 106.4 6.1 98 207-304 90-201 (317)
171 3tr6_A O-methyltransferase; ce 99.1 4.9E-11 1.7E-15 104.0 3.6 97 206-307 64-178 (225)
172 3dou_A Ribosomal RNA large sub 99.1 5.1E-10 1.7E-14 95.2 9.8 108 191-304 10-140 (191)
173 1jg1_A PIMT;, protein-L-isoasp 99.1 1.2E-10 4.2E-15 102.3 6.1 102 194-305 80-191 (235)
174 3adn_A Spermidine synthase; am 99.1 1.7E-10 5.8E-15 104.8 7.0 100 205-304 82-199 (294)
175 1vbf_A 231AA long hypothetical 99.1 1.7E-10 5.7E-15 101.0 6.7 100 195-305 60-167 (231)
176 2ozv_A Hypothetical protein AT 99.1 2E-10 7E-15 102.6 7.2 100 204-303 34-170 (260)
177 2nyu_A Putative ribosomal RNA 99.1 4.2E-10 1.4E-14 95.7 8.8 105 196-304 12-146 (196)
178 3r0q_C Probable protein argini 99.1 1.6E-10 5.5E-15 108.9 6.7 101 204-305 61-171 (376)
179 3lcv_B Sisomicin-gentamicin re 99.0 2.2E-10 7.4E-15 100.1 6.6 131 205-355 131-269 (281)
180 2b25_A Hypothetical protein; s 99.0 2.6E-10 8.8E-15 105.8 7.6 104 194-305 94-221 (336)
181 2gpy_A O-methyltransferase; st 99.0 1.3E-10 4.5E-15 102.0 5.2 96 206-306 54-163 (233)
182 1dl5_A Protein-L-isoaspartate 99.0 2.3E-10 8E-15 105.3 7.1 101 196-305 66-177 (317)
183 1p91_A Ribosomal RNA large sub 99.0 4.1E-10 1.4E-14 101.0 8.4 93 205-306 84-181 (269)
184 3dmg_A Probable ribosomal RNA 99.0 4.6E-10 1.6E-14 105.6 8.8 97 206-304 233-341 (381)
185 2esr_A Methyltransferase; stru 99.0 1.9E-10 6.4E-15 96.3 5.3 100 204-307 29-142 (177)
186 1nv8_A HEMK protein; class I a 99.0 5.4E-10 1.8E-14 101.1 8.6 94 206-301 123-247 (284)
187 1g6q_1 HnRNP arginine N-methyl 99.0 4.9E-10 1.7E-14 103.6 7.7 95 206-301 38-143 (328)
188 1i9g_A Hypothetical protein RV 99.0 1.1E-09 3.8E-14 98.7 9.7 104 194-305 88-205 (280)
189 3bzb_A Uncharacterized protein 99.0 1.8E-09 6.3E-14 97.5 11.1 95 205-302 78-204 (281)
190 3c3p_A Methyltransferase; NP_9 99.0 2.1E-10 7E-15 99.0 4.3 97 206-307 56-164 (210)
191 3dr5_A Putative O-methyltransf 99.0 1.9E-10 6.5E-15 100.2 3.9 95 207-306 57-166 (221)
192 2fhp_A Methylase, putative; al 99.0 3.8E-10 1.3E-14 95.1 5.2 99 204-306 42-157 (187)
193 2hnk_A SAM-dependent O-methylt 99.0 4.7E-10 1.6E-14 98.9 5.6 97 205-306 59-184 (239)
194 1sui_A Caffeoyl-COA O-methyltr 99.0 4E-10 1.4E-14 99.9 5.1 96 206-306 79-193 (247)
195 2oxt_A Nucleoside-2'-O-methylt 98.9 2.2E-09 7.6E-14 95.9 9.4 106 194-305 63-187 (265)
196 2avd_A Catechol-O-methyltransf 98.9 3.5E-10 1.2E-14 98.8 4.0 97 205-306 68-182 (229)
197 1r18_A Protein-L-isoaspartate( 98.9 6.6E-10 2.3E-14 97.0 5.6 93 204-304 82-195 (227)
198 2ift_A Putative methylase HI07 98.9 2.5E-10 8.7E-15 97.9 2.7 97 206-306 53-166 (201)
199 1ws6_A Methyltransferase; stru 98.9 3.3E-10 1.1E-14 94.0 3.1 95 206-306 41-150 (171)
200 2i7c_A Spermidine synthase; tr 98.9 4.7E-10 1.6E-14 101.5 4.2 99 205-303 77-192 (283)
201 2p41_A Type II methyltransfera 98.9 2.9E-09 9.9E-14 97.1 9.3 105 195-303 72-191 (305)
202 2yvl_A TRMI protein, hypotheti 98.9 3E-09 1E-13 93.9 9.2 100 196-305 82-192 (248)
203 3tma_A Methyltransferase; thum 98.9 2.4E-09 8.3E-14 100.0 8.8 109 195-304 193-318 (354)
204 2wa2_A Non-structural protein 98.9 2.7E-09 9.2E-14 95.9 8.5 106 194-305 71-195 (276)
205 1xj5_A Spermidine synthase 1; 98.9 6.5E-10 2.2E-14 102.7 4.5 99 205-303 119-235 (334)
206 1ixk_A Methyltransferase; open 98.9 2.3E-09 7.8E-14 98.4 7.9 103 204-306 116-249 (315)
207 1iy9_A Spermidine synthase; ro 98.9 8.2E-10 2.8E-14 99.4 4.8 98 206-303 75-189 (275)
208 2pbf_A Protein-L-isoaspartate 98.9 1.5E-09 5.2E-14 94.6 6.3 94 204-305 78-195 (227)
209 2o07_A Spermidine synthase; st 98.9 7.5E-10 2.6E-14 101.1 4.3 101 205-305 94-211 (304)
210 1uir_A Polyamine aminopropyltr 98.9 7.1E-10 2.4E-14 101.8 4.2 99 206-304 77-196 (314)
211 3gdh_A Trimethylguanosine synt 98.9 4.8E-11 1.6E-15 105.2 -3.8 136 206-362 78-223 (241)
212 1mjf_A Spermidine synthase; sp 98.9 1.1E-09 3.7E-14 99.0 5.0 97 206-303 75-193 (281)
213 1i1n_A Protein-L-isoaspartate 98.9 2.8E-09 9.7E-14 92.8 7.5 94 204-305 75-184 (226)
214 2fpo_A Methylase YHHF; structu 98.9 1.3E-09 4.5E-14 93.5 5.2 96 206-305 54-162 (202)
215 3cbg_A O-methyltransferase; cy 98.9 6.3E-10 2.1E-14 97.6 3.1 96 206-306 72-185 (232)
216 3c3y_A Pfomt, O-methyltransfer 98.9 9.3E-10 3.2E-14 96.9 4.1 95 206-305 70-183 (237)
217 2b2c_A Spermidine synthase; be 98.9 8.1E-10 2.8E-14 101.2 3.8 98 206-303 108-222 (314)
218 2pt6_A Spermidine synthase; tr 98.9 1E-09 3.5E-14 101.0 4.1 98 206-303 116-230 (321)
219 3frh_A 16S rRNA methylase; met 98.8 4.7E-09 1.6E-13 90.9 6.9 95 205-303 104-206 (253)
220 1zq9_A Probable dimethyladenos 98.8 2.1E-09 7.1E-14 97.3 4.8 102 194-299 17-143 (285)
221 1ne2_A Hypothetical protein TA 98.8 5E-09 1.7E-13 89.5 6.9 87 205-293 50-139 (200)
222 2cmg_A Spermidine synthase; tr 98.8 6.1E-09 2.1E-13 92.9 7.5 89 206-303 72-171 (262)
223 3a27_A TYW2, uncharacterized p 98.8 2.6E-09 8.9E-14 96.0 5.2 97 204-306 117-222 (272)
224 1inl_A Spermidine synthase; be 98.8 1.9E-09 6.4E-14 98.1 4.2 98 206-303 90-205 (296)
225 2xyq_A Putative 2'-O-methyl tr 98.8 1.1E-08 3.7E-13 92.3 8.8 115 204-356 61-195 (290)
226 4hc4_A Protein arginine N-meth 98.8 5.4E-09 1.8E-13 97.7 5.6 95 206-301 83-187 (376)
227 4azs_A Methyltransferase WBDD; 98.7 3.3E-09 1.1E-13 105.3 3.1 102 206-309 66-179 (569)
228 2f8l_A Hypothetical protein LM 98.7 9.7E-09 3.3E-13 95.5 5.7 100 205-304 129-257 (344)
229 2ih2_A Modification methylase 98.7 2.9E-08 1E-12 94.7 9.2 105 196-304 30-165 (421)
230 2yxl_A PH0851 protein, 450AA l 98.7 2.2E-08 7.5E-13 96.5 8.3 104 204-307 257-393 (450)
231 1wy7_A Hypothetical protein PH 98.7 6.1E-08 2.1E-12 83.0 10.3 94 205-303 48-148 (207)
232 3tm4_A TRNA (guanine N2-)-meth 98.7 3.5E-08 1.2E-12 92.7 9.4 122 204-359 215-353 (373)
233 3ajd_A Putative methyltransfer 98.7 1.3E-08 4.4E-13 91.5 5.8 103 204-306 81-214 (274)
234 1qam_A ERMC' methyltransferase 98.7 2E-08 6.8E-13 88.7 6.9 103 194-299 19-142 (244)
235 1yub_A Ermam, rRNA methyltrans 98.7 5E-09 1.7E-13 92.6 2.3 107 194-303 18-145 (245)
236 3b5i_A S-adenosyl-L-methionine 98.7 4.4E-07 1.5E-11 84.5 15.5 165 193-357 35-297 (374)
237 2igt_A SAM dependent methyltra 98.6 3.6E-08 1.2E-12 91.0 6.6 96 206-305 153-274 (332)
238 3k6r_A Putative transferase PH 98.6 3E-08 1E-12 88.8 5.7 119 205-353 124-252 (278)
239 1sqg_A SUN protein, FMU protei 98.6 8.5E-08 2.9E-12 91.8 7.5 103 204-306 244-377 (429)
240 2h1r_A Dimethyladenosine trans 98.6 7.9E-08 2.7E-12 87.5 6.6 99 195-297 32-153 (299)
241 1rjd_A PPM1P, carboxy methyl t 98.6 3.4E-07 1.2E-11 84.3 10.9 141 206-351 97-281 (334)
242 3m6w_A RRNA methylase; rRNA me 98.5 8.4E-08 2.9E-12 92.0 5.9 102 204-306 99-232 (464)
243 2frx_A Hypothetical protein YE 98.5 2.7E-07 9.3E-12 89.2 9.4 101 206-306 117-249 (479)
244 4gqb_A Protein arginine N-meth 98.5 1.3E-07 4.3E-12 93.6 5.8 126 168-300 323-464 (637)
245 2b78_A Hypothetical protein SM 98.5 7.1E-08 2.4E-12 91.0 3.8 98 206-304 212-332 (385)
246 2efj_A 3,7-dimethylxanthine me 98.5 3.5E-06 1.2E-10 78.5 15.0 150 207-356 53-290 (384)
247 1m6e_X S-adenosyl-L-methionnin 98.4 3.3E-06 1.1E-10 78.0 13.6 151 205-355 50-277 (359)
248 3ua3_A Protein arginine N-meth 98.4 4E-07 1.4E-11 90.0 7.1 126 168-300 378-531 (745)
249 2okc_A Type I restriction enzy 98.4 1.7E-07 5.8E-12 90.1 4.4 108 196-304 162-308 (445)
250 3c0k_A UPF0064 protein YCCW; P 98.4 1.8E-07 6.1E-12 88.6 4.2 98 206-304 220-340 (396)
251 1wxx_A TT1595, hypothetical pr 98.4 1.4E-07 4.8E-12 88.9 3.1 98 206-305 209-327 (382)
252 3ftd_A Dimethyladenosine trans 98.4 1.3E-06 4.3E-11 77.2 9.0 91 194-286 20-116 (249)
253 2as0_A Hypothetical protein PH 98.3 1.6E-07 5.4E-12 89.0 3.0 99 206-305 217-337 (396)
254 3k0b_A Predicted N6-adenine-sp 98.3 7.4E-07 2.5E-11 84.0 7.0 110 194-304 190-351 (393)
255 2yx1_A Hypothetical protein MJ 98.3 2.9E-07 9.9E-12 85.1 4.1 93 205-306 194-294 (336)
256 3ldg_A Putative uncharacterize 98.3 2.1E-06 7.3E-11 80.5 9.4 110 194-304 183-344 (384)
257 4dmg_A Putative uncharacterize 98.3 7.4E-07 2.5E-11 84.0 6.2 99 206-306 214-329 (393)
258 3m4x_A NOL1/NOP2/SUN family pr 98.3 4.7E-07 1.6E-11 86.7 4.7 103 204-306 103-237 (456)
259 3o4f_A Spermidine synthase; am 98.3 7.6E-07 2.6E-11 79.9 5.7 101 205-305 82-200 (294)
260 3gru_A Dimethyladenosine trans 98.3 1.2E-06 3.9E-11 79.3 6.9 83 194-280 39-129 (295)
261 2qfm_A Spermine synthase; sper 98.2 5.7E-07 1.9E-11 82.9 4.4 98 206-304 188-315 (364)
262 3ldu_A Putative methylase; str 98.2 1.4E-06 4.8E-11 82.0 7.0 110 194-304 184-345 (385)
263 3evf_A RNA-directed RNA polyme 98.2 4.1E-06 1.4E-10 73.7 9.2 114 192-307 61-187 (277)
264 3fut_A Dimethyladenosine trans 98.2 1.5E-06 5.2E-11 77.5 6.5 90 195-288 37-133 (271)
265 3v97_A Ribosomal RNA large sub 98.2 9.4E-07 3.2E-11 89.5 5.5 96 206-304 539-658 (703)
266 1uwv_A 23S rRNA (uracil-5-)-me 98.2 4.6E-06 1.6E-10 79.8 8.8 99 195-302 276-388 (433)
267 1qyr_A KSGA, high level kasuga 98.1 2.2E-06 7.6E-11 75.7 5.9 90 194-286 10-111 (252)
268 2jjq_A Uncharacterized RNA met 98.1 6.1E-06 2.1E-10 78.6 9.1 90 206-303 290-387 (425)
269 3uzu_A Ribosomal RNA small sub 98.1 7.9E-07 2.7E-11 79.8 2.0 68 195-263 32-105 (279)
270 3iei_A Leucine carboxyl methyl 98.1 6.5E-05 2.2E-09 68.8 14.6 143 206-358 90-281 (334)
271 3tqs_A Ribosomal RNA small sub 98.0 3E-06 1E-10 75.0 4.5 67 194-263 18-90 (255)
272 2qy6_A UPF0209 protein YFCK; s 98.0 3.9E-06 1.3E-10 74.3 5.2 129 206-367 60-244 (257)
273 3gcz_A Polyprotein; flavivirus 97.9 1.7E-05 5.7E-10 70.0 6.3 111 190-302 75-200 (282)
274 1m6y_A S-adenosyl-methyltransf 97.9 1E-05 3.5E-10 73.2 4.7 78 194-272 15-106 (301)
275 2uyo_A Hypothetical protein ML 97.8 0.00011 3.8E-09 66.7 10.9 144 206-353 102-274 (310)
276 2r6z_A UPF0341 protein in RSP 97.8 2.9E-05 9.8E-10 68.8 6.5 99 204-306 81-219 (258)
277 3bt7_A TRNA (uracil-5-)-methyl 97.8 7.4E-06 2.5E-10 76.7 2.6 88 207-304 214-327 (369)
278 2dul_A N(2),N(2)-dimethylguano 97.8 1.3E-05 4.5E-10 75.0 4.1 91 207-303 48-164 (378)
279 2b9e_A NOL1/NOP2/SUN domain fa 97.7 7.9E-05 2.7E-09 67.7 8.2 101 204-305 100-236 (309)
280 3v97_A Ribosomal RNA large sub 97.7 5.6E-05 1.9E-09 76.5 7.8 110 194-304 179-348 (703)
281 2ar0_A M.ecoki, type I restric 97.7 2.6E-05 8.8E-10 76.6 4.5 101 204-304 167-313 (541)
282 3eld_A Methyltransferase; flav 97.6 0.00021 7.2E-09 63.4 9.3 110 191-302 67-190 (300)
283 3axs_A Probable N(2),N(2)-dime 97.6 2.4E-05 8.3E-10 73.4 2.5 92 206-303 52-158 (392)
284 4auk_A Ribosomal RNA large sub 97.6 0.00032 1.1E-08 64.6 9.7 96 204-304 209-307 (375)
285 3s1s_A Restriction endonucleas 97.5 0.00019 6.6E-09 72.2 8.6 100 205-304 320-466 (878)
286 2px2_A Genome polyprotein [con 97.5 0.00037 1.3E-08 60.5 8.3 112 190-304 58-184 (269)
287 3c6k_A Spermine synthase; sper 97.4 8.5E-05 2.9E-09 68.7 4.0 98 206-304 205-332 (381)
288 2vz8_A Fatty acid synthase; tr 97.4 3.6E-05 1.2E-09 87.9 1.9 142 206-357 1240-1394(2512)
289 3khk_A Type I restriction-modi 97.4 7.8E-05 2.7E-09 73.1 3.7 97 208-304 246-396 (544)
290 2k4m_A TR8_protein, UPF0146 pr 97.4 0.0011 3.8E-08 52.4 9.3 85 206-307 35-125 (153)
291 2oyr_A UPF0341 protein YHIQ; a 97.3 5.9E-05 2E-09 66.6 1.6 71 204-276 84-176 (258)
292 2zwa_A Leucine carboxyl methyl 97.2 0.003 1E-07 63.9 12.9 144 206-357 107-308 (695)
293 3p8z_A Mtase, non-structural p 97.2 0.0023 8E-08 54.6 9.9 115 191-309 64-191 (267)
294 3b73_A PHIH1 repressor-like pr 97.2 0.00034 1.1E-08 53.1 4.2 65 48-125 14-80 (111)
295 3lkd_A Type I restriction-modi 97.2 0.00054 1.8E-08 67.0 6.8 99 206-304 221-359 (542)
296 3lkz_A Non-structural protein 97.2 0.0025 8.5E-08 56.3 10.2 114 192-308 81-208 (321)
297 2wk1_A NOVP; transferase, O-me 97.1 0.0011 3.8E-08 59.1 7.9 94 206-303 106-244 (282)
298 3cvo_A Methyltransferase-like 97.1 0.0012 4.2E-08 55.8 7.5 88 206-304 30-154 (202)
299 2heo_A Z-DNA binding protein 1 96.9 0.00039 1.3E-08 47.7 2.5 55 49-115 12-66 (67)
300 1qbj_A Protein (double-strande 96.9 0.0015 5E-08 46.5 5.0 66 47-120 10-75 (81)
301 1y0u_A Arsenical resistance op 96.8 0.00081 2.8E-08 49.6 3.6 61 43-119 27-87 (96)
302 3ll7_A Putative methyltransfer 96.8 0.00065 2.2E-08 63.8 3.5 64 206-271 93-170 (410)
303 1wg8_A Predicted S-adenosylmet 96.7 0.0015 5.3E-08 57.7 5.2 64 194-260 11-77 (285)
304 1qgp_A Protein (double strande 96.6 0.0016 5.5E-08 45.9 3.5 62 47-116 14-75 (77)
305 3pqk_A Biofilm growth-associat 96.6 0.0023 7.9E-08 47.6 4.5 61 46-117 22-82 (102)
306 1xmk_A Double-stranded RNA-spe 96.6 0.0016 5.3E-08 46.0 3.3 62 48-120 12-74 (79)
307 3jth_A Transcription activator 96.2 0.0019 6.5E-08 47.7 2.4 63 44-117 20-82 (98)
308 3f6o_A Probable transcriptiona 96.2 0.0023 7.8E-08 49.2 2.8 67 42-119 13-79 (118)
309 2hzt_A Putative HTH-type trans 96.2 0.0045 1.5E-07 46.6 4.3 63 52-122 19-82 (107)
310 1ub9_A Hypothetical protein PH 96.1 0.0033 1.1E-07 46.4 3.2 73 42-121 11-83 (100)
311 1u2w_A CADC repressor, cadmium 96.1 0.004 1.4E-07 48.1 3.6 65 43-117 38-102 (122)
312 3mq0_A Transcriptional repress 96.1 0.0033 1.1E-07 56.0 3.5 57 51-119 34-90 (275)
313 3tka_A Ribosomal RNA small sub 95.9 0.013 4.3E-07 53.2 6.5 67 193-260 45-115 (347)
314 3ech_A MEXR, multidrug resista 95.9 0.015 5.3E-07 45.7 6.3 70 47-123 37-106 (142)
315 4a5n_A Uncharacterized HTH-typ 95.9 0.0087 3E-07 46.8 4.6 80 27-123 15-95 (131)
316 3cuo_A Uncharacterized HTH-typ 95.9 0.004 1.4E-07 45.8 2.5 62 47-118 24-85 (99)
317 2oqg_A Possible transcriptiona 95.8 0.0054 1.8E-07 46.5 3.0 61 48-119 22-82 (114)
318 2jsc_A Transcriptional regulat 95.8 0.0048 1.6E-07 47.3 2.7 64 43-117 17-80 (118)
319 3f6v_A Possible transcriptiona 95.8 0.0047 1.6E-07 49.7 2.7 69 40-119 51-119 (151)
320 1z7u_A Hypothetical protein EF 95.7 0.0069 2.4E-07 45.9 3.5 78 28-122 12-90 (112)
321 1r1u_A CZRA, repressor protein 95.7 0.0054 1.8E-07 46.0 2.7 47 47-101 26-72 (106)
322 3df8_A Possible HXLR family tr 95.6 0.0076 2.6E-07 45.7 3.3 74 29-123 18-94 (111)
323 1i4w_A Mitochondrial replicati 95.5 0.015 5.1E-07 53.5 5.6 54 207-260 59-116 (353)
324 2htj_A P fimbrial regulatory p 95.5 0.011 3.9E-07 41.8 3.8 45 50-101 3-47 (81)
325 2jt1_A PEFI protein; solution 95.5 0.0086 3E-07 42.0 2.9 44 52-101 9-57 (77)
326 1mkm_A ICLR transcriptional re 95.5 0.012 4E-07 51.5 4.4 58 50-119 11-68 (249)
327 4fzv_A Putative methyltransfer 95.4 0.02 6.9E-07 52.8 6.1 104 204-307 146-288 (359)
328 2kko_A Possible transcriptiona 95.4 0.003 1E-07 47.6 0.4 46 48-101 26-71 (108)
329 2fsw_A PG_0823 protein; alpha- 95.4 0.0088 3E-07 44.9 3.0 78 28-122 15-93 (107)
330 2y75_A HTH-type transcriptiona 95.4 0.023 7.8E-07 44.1 5.4 58 52-117 14-71 (129)
331 2xrn_A HTH-type transcriptiona 95.4 0.0087 3E-07 52.1 3.2 61 50-121 9-69 (241)
332 3kp7_A Transcriptional regulat 95.4 0.058 2E-06 42.7 8.0 67 49-123 40-108 (151)
333 2f2e_A PA1607; transcription f 95.4 0.013 4.4E-07 46.7 4.0 55 63-122 36-90 (146)
334 3bja_A Transcriptional regulat 95.3 0.019 6.5E-07 44.8 4.7 69 48-123 34-102 (139)
335 1r1t_A Transcriptional repress 95.3 0.0092 3.1E-07 46.0 2.7 47 47-101 46-92 (122)
336 1yyv_A Putative transcriptiona 95.3 0.012 4.1E-07 46.0 3.4 79 28-123 25-104 (131)
337 1xn7_A Hypothetical protein YH 95.3 0.015 5.1E-07 40.9 3.5 43 52-101 7-49 (78)
338 2k02_A Ferrous iron transport 95.2 0.014 4.9E-07 41.8 3.4 44 51-101 6-49 (87)
339 3bdd_A Regulatory protein MARR 95.2 0.064 2.2E-06 41.8 7.6 68 48-122 32-99 (142)
340 1oyi_A Double-stranded RNA-bin 95.2 0.013 4.5E-07 41.4 3.0 60 47-118 17-76 (82)
341 3ufb_A Type I restriction-modi 95.1 0.064 2.2E-06 52.3 8.8 107 197-304 209-363 (530)
342 3k0l_A Repressor protein; heli 95.1 0.024 8.1E-07 45.8 5.0 69 48-123 47-115 (162)
343 3g3z_A NMB1585, transcriptiona 95.1 0.037 1.3E-06 43.5 6.0 69 48-123 32-100 (145)
344 2hr3_A Probable transcriptiona 95.1 0.024 8.4E-07 44.7 4.9 70 47-123 35-105 (147)
345 1jgs_A Multiple antibiotic res 95.0 0.041 1.4E-06 42.8 6.0 69 48-123 35-103 (138)
346 1tbx_A ORF F-93, hypothetical 95.0 0.014 4.9E-07 42.9 3.0 65 49-123 10-78 (99)
347 3nrv_A Putative transcriptiona 95.0 0.016 5.5E-07 45.9 3.5 70 47-123 40-109 (148)
348 3vyw_A MNMC2; tRNA wobble urid 95.0 0.055 1.9E-06 48.5 7.2 129 206-367 96-257 (308)
349 3r4k_A Transcriptional regulat 94.9 0.0053 1.8E-07 54.2 0.6 60 50-120 9-68 (260)
350 2qww_A Transcriptional regulat 94.9 0.052 1.8E-06 43.1 6.5 69 48-123 42-112 (154)
351 3r24_A NSP16, 2'-O-methyl tran 94.9 0.041 1.4E-06 48.6 5.9 92 205-303 108-217 (344)
352 1r7j_A Conserved hypothetical 94.8 0.018 6.1E-07 42.2 3.1 48 65-123 21-68 (95)
353 3oop_A LIN2960 protein; protei 94.8 0.014 4.9E-07 45.9 2.8 70 47-123 37-106 (143)
354 1on2_A Transcriptional regulat 94.8 0.022 7.6E-07 44.9 3.9 51 63-123 21-71 (142)
355 2eth_A Transcriptional regulat 94.8 0.03 1E-06 44.7 4.7 70 47-123 44-113 (154)
356 2fa5_A Transcriptional regulat 94.8 0.051 1.7E-06 43.6 6.1 69 48-123 50-118 (162)
357 3deu_A Transcriptional regulat 94.8 0.032 1.1E-06 45.3 4.9 71 47-123 53-123 (166)
358 2gxg_A 146AA long hypothetical 94.7 0.048 1.6E-06 42.8 5.7 68 48-123 38-105 (146)
359 2bv6_A MGRA, HTH-type transcri 94.6 0.03 1E-06 43.9 4.3 70 47-123 37-106 (142)
360 3hsr_A HTH-type transcriptiona 94.6 0.082 2.8E-06 41.3 6.7 69 48-123 37-105 (140)
361 3e6m_A MARR family transcripti 94.6 0.078 2.7E-06 42.6 6.7 69 48-123 54-122 (161)
362 2nnn_A Probable transcriptiona 94.5 0.017 5.8E-07 45.1 2.6 69 48-123 39-107 (140)
363 3jw4_A Transcriptional regulat 94.5 0.089 3E-06 41.5 6.9 71 48-123 42-112 (148)
364 3cdh_A Transcriptional regulat 94.5 0.027 9.2E-07 45.0 3.8 69 48-123 44-112 (155)
365 3s2w_A Transcriptional regulat 94.5 0.085 2.9E-06 42.2 6.8 68 49-123 52-119 (159)
366 2o0y_A Transcriptional regulat 94.5 0.013 4.3E-07 51.7 1.9 57 51-119 27-83 (260)
367 2wte_A CSA3; antiviral protein 94.4 0.023 8E-07 49.4 3.4 64 48-123 153-216 (244)
368 3bj6_A Transcriptional regulat 94.4 0.027 9.2E-07 44.7 3.6 69 48-123 41-109 (152)
369 2rdp_A Putative transcriptiona 94.4 0.027 9.3E-07 44.6 3.5 69 48-123 43-111 (150)
370 2fbh_A Transcriptional regulat 94.4 0.03 1E-06 44.0 3.8 67 49-122 39-106 (146)
371 3f3x_A Transcriptional regulat 94.3 0.066 2.2E-06 42.0 5.6 69 47-123 37-105 (144)
372 2frh_A SARA, staphylococcal ac 94.3 0.027 9.3E-07 43.5 3.2 71 48-123 38-108 (127)
373 1lj9_A Transcriptional regulat 94.3 0.029 9.9E-07 44.1 3.5 68 49-123 31-98 (144)
374 3fm5_A Transcriptional regulat 94.3 0.025 8.6E-07 44.9 3.1 71 47-123 39-109 (150)
375 2nyx_A Probable transcriptiona 94.3 0.099 3.4E-06 42.3 6.7 70 47-123 45-114 (168)
376 3t8r_A Staphylococcus aureus C 94.3 0.057 1.9E-06 42.8 5.1 49 63-119 27-75 (143)
377 3lwf_A LIN1550 protein, putati 94.2 0.043 1.5E-06 44.4 4.3 47 63-117 43-89 (159)
378 1sfx_A Conserved hypothetical 94.2 0.021 7.2E-07 42.4 2.3 47 48-101 21-67 (109)
379 3cjn_A Transcriptional regulat 94.2 0.029 1E-06 45.1 3.3 70 47-123 52-121 (162)
380 3eco_A MEPR; mutlidrug efflux 94.2 0.027 9.3E-07 44.0 3.0 71 48-123 32-102 (139)
381 1s3j_A YUSO protein; structura 94.2 0.13 4.4E-06 40.7 7.1 68 49-123 39-106 (155)
382 2g7u_A Transcriptional regulat 94.1 0.019 6.5E-07 50.4 2.2 60 50-122 17-76 (257)
383 3bro_A Transcriptional regulat 94.1 0.044 1.5E-06 42.8 4.1 71 48-123 35-105 (141)
384 2zkz_A Transcriptional repress 94.1 0.021 7.2E-07 42.1 2.1 61 46-117 26-86 (99)
385 1z91_A Organic hydroperoxide r 94.1 0.031 1.1E-06 44.1 3.2 69 48-123 41-109 (147)
386 4hbl_A Transcriptional regulat 94.1 0.021 7E-07 45.4 2.1 69 47-122 41-109 (149)
387 3tgn_A ADC operon repressor AD 94.0 0.035 1.2E-06 43.7 3.4 69 47-123 38-106 (146)
388 2pex_A Transcriptional regulat 94.0 0.032 1.1E-06 44.4 3.2 69 48-123 48-116 (153)
389 3u1d_A Uncharacterized protein 94.0 0.068 2.3E-06 42.5 5.0 71 48-123 30-106 (151)
390 3bpv_A Transcriptional regulat 93.9 0.024 8.4E-07 44.1 2.2 69 48-123 30-98 (138)
391 2ia2_A Putative transcriptiona 93.8 0.017 6E-07 50.9 1.3 57 50-119 24-80 (265)
392 2fbi_A Probable transcriptiona 93.7 0.023 7.9E-07 44.4 1.8 69 48-123 37-105 (142)
393 2a61_A Transcriptional regulat 93.7 0.025 8.6E-07 44.4 2.0 70 47-123 33-102 (145)
394 2fu4_A Ferric uptake regulatio 93.7 0.031 1E-06 39.6 2.3 49 48-101 18-71 (83)
395 1bja_A Transcription regulator 93.7 0.062 2.1E-06 39.1 3.9 62 48-123 17-79 (95)
396 3boq_A Transcriptional regulat 93.6 0.044 1.5E-06 43.9 3.3 69 48-123 48-117 (160)
397 2obp_A Putative DNA-binding pr 93.5 0.06 2E-06 39.3 3.5 55 62-122 34-88 (96)
398 4aik_A Transcriptional regulat 93.5 0.076 2.6E-06 42.3 4.5 69 49-123 33-101 (151)
399 2pg4_A Uncharacterized protein 93.3 0.036 1.2E-06 40.4 2.1 64 52-123 20-84 (95)
400 3k69_A Putative transcription 93.2 0.089 3.1E-06 42.6 4.5 49 63-119 27-75 (162)
401 3nqo_A MARR-family transcripti 93.2 0.065 2.2E-06 44.5 3.8 73 46-123 40-112 (189)
402 3r0a_A Putative transcriptiona 93.1 0.043 1.5E-06 42.2 2.4 48 48-101 27-75 (123)
403 2fbk_A Transcriptional regulat 93.0 0.058 2E-06 44.3 3.2 72 48-123 70-141 (181)
404 2lkp_A Transcriptional regulat 92.8 0.054 1.8E-06 41.2 2.5 47 47-101 32-78 (119)
405 2x4h_A Hypothetical protein SS 92.8 0.08 2.8E-06 41.3 3.6 49 63-122 30-78 (139)
406 2zig_A TTHA0409, putative modi 92.7 0.12 4E-06 46.4 5.0 50 194-247 225-275 (297)
407 1ylf_A RRF2 family protein; st 92.7 0.062 2.1E-06 42.9 2.8 48 63-119 29-76 (149)
408 2p4w_A Transcriptional regulat 92.5 0.094 3.2E-06 44.1 3.9 70 42-119 10-81 (202)
409 2h09_A Transcriptional regulat 92.1 0.16 5.5E-06 40.4 4.7 57 53-122 46-102 (155)
410 2esh_A Conserved hypothetical 92.1 0.24 8.2E-06 37.6 5.4 72 44-123 10-91 (118)
411 2lnb_A Z-DNA-binding protein 1 92.1 0.089 3E-06 36.2 2.5 54 50-115 22-75 (80)
412 2qvo_A Uncharacterized protein 92.1 0.078 2.7E-06 38.6 2.5 53 64-123 30-82 (95)
413 4b8x_A SCO5413, possible MARR- 91.9 0.055 1.9E-06 43.0 1.6 70 49-123 37-106 (147)
414 2fxa_A Protease production reg 91.9 0.077 2.6E-06 44.8 2.6 69 48-123 49-117 (207)
415 2qlz_A Transcription factor PF 91.3 0.048 1.6E-06 47.0 0.6 71 41-119 6-79 (232)
416 2dk5_A DNA-directed RNA polyme 91.0 0.22 7.6E-06 35.9 3.9 48 49-101 22-69 (91)
417 2pn6_A ST1022, 150AA long hypo 91.0 0.13 4.5E-06 40.8 3.0 46 48-100 4-49 (150)
418 1q1h_A TFE, transcription fact 90.9 0.12 4E-06 38.7 2.5 47 49-101 20-66 (110)
419 2w25_A Probable transcriptiona 90.9 0.15 5.3E-06 40.4 3.3 47 48-101 8-54 (150)
420 1xd7_A YWNA; structural genomi 90.9 0.19 6.7E-06 39.7 3.9 47 64-120 24-70 (145)
421 3u2r_A Regulatory protein MARR 90.9 0.099 3.4E-06 42.3 2.2 71 48-123 47-117 (168)
422 2cfx_A HTH-type transcriptiona 90.5 0.17 6E-06 39.8 3.3 46 48-100 6-51 (144)
423 1uly_A Hypothetical protein PH 90.1 0.21 7E-06 41.7 3.5 51 43-101 16-66 (192)
424 2p5v_A Transcriptional regulat 90.0 0.2 6.9E-06 40.3 3.3 46 48-100 11-56 (162)
425 3hrs_A Metalloregulator SCAR; 89.9 0.22 7.4E-06 42.3 3.5 51 63-123 19-69 (214)
426 4g6q_A Putative uncharacterize 89.8 0.089 3E-06 43.5 1.0 69 44-120 20-91 (182)
427 3ggo_A Prephenate dehydrogenas 89.6 1.6 5.5E-05 39.2 9.3 89 207-300 33-125 (314)
428 2xvc_A ESCRT-III, SSO0910; cel 89.6 0.18 6.1E-06 32.4 2.0 46 49-100 12-57 (59)
429 2cyy_A Putative HTH-type trans 89.5 0.19 6.4E-06 40.0 2.7 46 48-100 8-53 (151)
430 2k4b_A Transcriptional regulat 89.5 0.14 4.9E-06 37.6 1.8 51 48-101 36-86 (99)
431 3tos_A CALS11; methyltransfera 89.4 0.45 1.5E-05 41.5 5.2 95 206-304 69-218 (257)
432 2dbb_A Putative HTH-type trans 89.3 0.24 8.4E-06 39.2 3.3 46 48-100 10-55 (151)
433 4esf_A PADR-like transcription 89.3 0.43 1.5E-05 36.2 4.5 74 42-123 6-87 (117)
434 2e1c_A Putative HTH-type trans 89.2 0.25 8.5E-06 40.3 3.3 46 48-100 28-73 (171)
435 3i4p_A Transcriptional regulat 89.2 0.22 7.6E-06 40.1 3.0 46 48-100 4-49 (162)
436 1p6r_A Penicillinase repressor 89.1 0.14 4.9E-06 35.9 1.5 51 48-101 10-60 (82)
437 4fx0_A Probable transcriptiona 89.0 0.2 7E-06 39.6 2.5 70 49-123 35-106 (148)
438 2cg4_A Regulatory protein ASNC 89.0 0.22 7.4E-06 39.6 2.7 46 48-100 9-54 (152)
439 1i1g_A Transcriptional regulat 88.7 0.24 8E-06 38.7 2.7 45 49-100 6-50 (141)
440 1p4x_A Staphylococcal accessor 88.6 0.29 9.9E-06 42.6 3.4 71 48-123 159-229 (250)
441 2fe3_A Peroxide operon regulat 88.6 0.41 1.4E-05 37.8 4.1 62 46-115 21-87 (145)
442 3f8b_A Transcriptional regulat 88.5 0.57 1.9E-05 35.4 4.7 75 41-123 6-90 (116)
443 2ia0_A Putative HTH-type trans 88.5 0.29 1E-05 39.8 3.3 46 48-100 18-63 (171)
444 2d1h_A ST1889, 109AA long hypo 88.2 0.27 9.2E-06 36.1 2.6 35 63-101 35-69 (109)
445 2oo3_A Protein involved in cat 88.2 0.86 2.9E-05 40.2 6.2 97 207-307 92-202 (283)
446 2o03_A Probable zinc uptake re 88.0 0.34 1.2E-05 37.5 3.2 61 46-114 10-75 (131)
447 3elk_A Putative transcriptiona 87.8 0.31 1.1E-05 37.0 2.8 74 42-123 9-90 (117)
448 1sfu_A 34L protein; protein/Z- 87.6 0.95 3.3E-05 31.1 4.8 35 63-101 28-62 (75)
449 2vn2_A DNAD, chromosome replic 87.1 0.42 1.4E-05 36.8 3.2 34 64-101 51-84 (128)
450 3hhh_A Transcriptional regulat 87.0 1.1 3.6E-05 33.9 5.4 75 41-123 7-89 (116)
451 3i71_A Ethanolamine utilizatio 86.9 0.82 2.8E-05 29.3 3.8 45 63-118 17-61 (68)
452 3k2z_A LEXA repressor; winged 86.4 0.46 1.6E-05 39.6 3.3 35 63-101 23-57 (196)
453 1ku9_A Hypothetical protein MJ 86.2 0.34 1.2E-05 37.8 2.4 46 50-101 29-74 (152)
454 1xma_A Predicted transcription 86.1 0.33 1.1E-05 38.4 2.1 72 44-123 38-119 (145)
455 1hsj_A Fusion protein consisti 85.8 0.48 1.6E-05 45.3 3.6 69 49-122 406-474 (487)
456 1zkd_A DUF185; NESG, RPR58, st 85.8 3.5 0.00012 38.1 9.2 59 176-239 55-120 (387)
457 3mwm_A ZUR, putative metal upt 85.4 0.66 2.3E-05 36.3 3.6 67 46-116 13-80 (139)
458 3l7w_A Putative uncharacterize 85.0 0.46 1.6E-05 35.3 2.4 71 45-123 7-82 (108)
459 3cta_A Riboflavin kinase; stru 84.9 0.45 1.5E-05 40.7 2.6 53 64-123 27-79 (230)
460 1j5y_A Transcriptional regulat 84.1 0.97 3.3E-05 37.2 4.3 58 47-117 21-79 (187)
461 1g60_A Adenine-specific methyl 84.0 1.2 4.1E-05 38.7 5.0 50 193-246 201-251 (260)
462 1yg2_A Gene activator APHA; vi 83.5 0.94 3.2E-05 37.0 3.9 65 48-120 3-77 (179)
463 1v4r_A Transcriptional repress 83.4 0.72 2.5E-05 33.8 2.8 35 63-101 33-68 (102)
464 2hoe_A N-acetylglucosamine kin 83.4 0.63 2.1E-05 43.1 3.1 72 40-119 13-87 (380)
465 2xig_A Ferric uptake regulatio 83.2 0.96 3.3E-05 35.9 3.7 62 46-115 26-92 (150)
466 1mzb_A Ferric uptake regulatio 83.0 0.86 2.9E-05 35.4 3.3 63 46-115 17-84 (136)
467 1g55_A DNA cytosine methyltran 82.7 2.5 8.5E-05 38.5 6.8 123 207-355 2-146 (343)
468 1okr_A MECI, methicillin resis 82.5 0.33 1.1E-05 36.8 0.7 46 49-101 12-61 (123)
469 1fx7_A Iron-dependent represso 82.4 0.75 2.6E-05 39.3 2.9 48 66-123 26-73 (230)
470 3mag_A VP39; methylated adenin 82.1 5 0.00017 35.3 8.0 79 206-307 60-142 (307)
471 3iht_A S-adenosyl-L-methionine 81.4 1.3 4.6E-05 35.0 3.7 110 194-305 30-149 (174)
472 2g1u_A Hypothetical protein TM 81.2 17 0.00059 28.2 12.0 92 205-302 17-117 (155)
473 2v79_A DNA replication protein 81.2 0.74 2.5E-05 35.8 2.2 34 64-101 51-84 (135)
474 2py6_A Methyltransferase FKBM; 81.0 2 6.8E-05 40.1 5.6 54 205-258 225-291 (409)
475 2g9w_A Conserved hypothetical 79.7 0.86 2.9E-05 35.4 2.2 48 48-101 10-61 (138)
476 1z6r_A MLC protein; transcript 79.6 1.1 3.8E-05 41.7 3.3 67 45-118 14-84 (406)
477 2g5c_A Prephenate dehydrogenas 79.0 9.2 0.00032 33.2 9.1 89 208-301 2-94 (281)
478 1sd4_A Penicillinase repressor 78.8 0.75 2.6E-05 34.9 1.6 51 48-101 11-61 (126)
479 1p4x_A Staphylococcal accessor 78.2 1.7 5.9E-05 37.6 3.9 71 48-123 35-105 (250)
480 3ps9_A TRNA 5-methylaminomethy 78.1 2.3 8E-05 42.5 5.4 22 206-227 66-87 (676)
481 3eyi_A Z-DNA-binding protein 1 77.9 3.2 0.00011 27.8 4.1 46 49-101 12-58 (72)
482 2qq9_A Diphtheria toxin repres 77.8 1.7 5.9E-05 36.9 3.7 50 64-123 24-73 (226)
483 3b1f_A Putative prephenate deh 77.6 11 0.00036 33.0 9.1 88 208-300 7-98 (290)
484 2p8t_A Hypothetical protein PH 77.4 1.5 5.1E-05 36.5 3.0 48 64-122 30-77 (200)
485 4esb_A Transcriptional regulat 77.2 1 3.5E-05 33.9 1.8 68 48-123 10-85 (115)
486 2pjp_A Selenocysteine-specific 76.9 0.94 3.2E-05 34.4 1.6 43 64-116 20-62 (121)
487 2yu3_A DNA-directed RNA polyme 76.9 0.99 3.4E-05 32.7 1.6 49 48-101 38-86 (95)
488 3c85_A Putative glutathione-re 76.8 14 0.00048 29.6 9.0 90 207-302 39-138 (183)
489 2vxz_A Pyrsv_GP04; viral prote 76.0 1.4 4.7E-05 34.5 2.2 46 49-102 13-58 (165)
490 3pvc_A TRNA 5-methylaminomethy 75.0 1.6 5.5E-05 43.8 3.2 118 206-356 58-231 (689)
491 1z05_A Transcriptional regulat 74.4 1.7 5.7E-05 40.9 2.9 69 44-119 36-108 (429)
492 3maj_A DNA processing chain A; 74.3 1.2 4E-05 41.1 1.8 53 49-115 330-382 (382)
493 2ek5_A Predicted transcription 74.3 3.4 0.00012 31.7 4.2 35 63-101 26-61 (129)
494 1bia_A BIRA bifunctional prote 74.2 2.1 7.3E-05 38.5 3.5 56 49-116 7-62 (321)
495 2o0m_A Transcriptional regulat 73.9 0.66 2.3E-05 42.4 0.0 62 48-123 21-82 (345)
496 1pqw_A Polyketide synthase; ro 73.8 9.1 0.00031 31.2 7.1 90 204-305 36-139 (198)
497 1pl8_A Human sorbitol dehydrog 73.6 6.8 0.00023 35.5 6.8 93 204-304 169-274 (356)
498 3g7u_A Cytosine-specific methy 73.2 12 0.00039 34.5 8.3 96 208-307 3-122 (376)
499 2b0l_A GTP-sensing transcripti 72.6 1.5 5E-05 32.2 1.6 34 64-101 42-76 (102)
500 3fwz_A Inner membrane protein 72.5 16 0.00056 27.8 8.0 89 207-302 7-104 (140)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=6.8e-56 Score=417.01 Aligned_cols=332 Identities=23% Similarity=0.395 Sum_probs=295.0
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 23 NEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
++++++..|++++.||+.+++|++|++|||||.|.+.+ +|+|++|||+++|+ +++.+.|+|++|++.|++.+..
T Consensus 4 ~e~~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~--~p~t~~eLA~~~g~----~~~~l~rlLr~L~~~gll~~~~ 77 (353)
T 4a6d_A 4 SEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAP--GPLDVAAVAAGVRA----SAHGTELLLDICVSLKLLKVET 77 (353)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSS--SCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCC--CCCCHHHHHHhhCc----CHHHHHHHHHHHHHCCCEEEec
Confidence 45688999999999999999999999999999998753 58999999999999 9999999999999999998642
Q ss_pred cCCCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccC---CChhhhhhcCchHH
Q 017595 103 SSAGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHG---MGVYEYAGNDSRFN 179 (369)
Q Consensus 103 ~~~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~---~~~~e~~~~~~~~~ 179 (369)
++ ..++|++|+.+..++.+..+.++++++.+. .+..+..|.+|.+.+++|.+++...+| ..+|+++.++++..
T Consensus 78 ~~---~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~vr~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (353)
T 4a6d_A 78 RG---GKAFYRNTELSSDYLTTVSPTSQCSMLKYM-GRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGER 153 (353)
T ss_dssp ET---TEEEEEECHHHHHHHSTTSTTCCHHHHHHH-HHTHHHHHTTHHHHHHHTSCCHHHHHSCCCSSHHHHHTSSHHHH
T ss_pred cC---ccceeeCCHHHHHHhhcCCchHHHHHHHHh-CHHHHHHHHHHHHHHhcCCChhHHhcCCChHHHHHHHhhCHHHH
Confidence 21 346899999999877776667888887765 345778999999999999999888877 46788899999999
Q ss_pred HHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC------CCCceE
Q 017595 180 GVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS------YRGVKH 253 (369)
Q Consensus 180 ~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~rv~~ 253 (369)
..|.++|...+......+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||++
T Consensus 154 ~~f~~aM~~~~~~~~~~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~ 232 (353)
T 4a6d_A 154 LQFMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDF 232 (353)
T ss_dssp HHHHHHHHTTHHHHHHHHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceee
Confidence 99999999998888889999888 88889999999999999999999999999999999999887653 379999
Q ss_pred EeCCCCC-CCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcC
Q 017595 254 IGGNMFE-RIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSG 332 (369)
Q Consensus 254 ~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 332 (369)
+.+||++ +.|.+|+|+++++||+|+|+++.++|++++++|+|||+|+|+|.+.+++...+. ....+|+.|+..+ +
T Consensus 233 ~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~ 308 (353)
T 4a6d_A 233 QEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-E 308 (353)
T ss_dssp EESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-S
T ss_pred ecCccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-C
Confidence 9999998 566679999999999999999999999999999999999999999877654332 3456788888765 9
Q ss_pred CccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 333 GRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 333 ~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
|++||.+||+++|++|||+.+++.+.++..++|+++|
T Consensus 309 g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 309 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred CcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 9999999999999999999999999999999999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=2.4e-54 Score=408.08 Aligned_cols=347 Identities=50% Similarity=0.912 Sum_probs=303.6
Q ss_pred hhhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCC-CCCCCcccHHHHHHHHhcCccccc
Q 017595 22 ENEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPS-RNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~-~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.++++++..+++++.+++.+++|++|+++||||+|.+.| ++|+|++|||+++++ ++|.++..++|+||+|++.|+|++
T Consensus 15 ~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g-~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~~ 93 (364)
T 3p9c_A 15 SADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAG-GKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTC 93 (364)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTT-TCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcC-CCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEEE
Confidence 457789999999999999999999999999999998842 248999999999995 222233499999999999999987
Q ss_pred cccC--CCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchH
Q 017595 101 SLSS--AGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRF 178 (369)
Q Consensus 101 ~~~~--~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~ 178 (369)
.... ++...++|++|+.++.++.+.++.++++++.+...+.++..|.+|.+++++|.++|+..+|.++|+|+.++++.
T Consensus 94 ~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~~~~~~~~g~~~~~~~~~~~~~ 173 (364)
T 3p9c_A 94 LVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRF 173 (364)
T ss_dssp EEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCSCHHHHHHSSCHHHHHTTCHHH
T ss_pred eccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCCChHHHhcCCCHHHHHHhCHHH
Confidence 5210 00014789999999988887666789998887777788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCC
Q 017595 179 NGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNM 258 (369)
Q Consensus 179 ~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~ 258 (369)
.+.|..+|...+......+++.++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.+||+++.+|+
T Consensus 174 ~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~ 253 (364)
T 3p9c_A 174 NRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDM 253 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCc
Confidence 99999999998888888899888767788999999999999999999999999999999999999999889999999999
Q ss_pred CCCCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCH
Q 017595 259 FERIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTT 338 (369)
Q Consensus 259 ~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~ 338 (369)
++++|.+|+|++.++||+|+++++.++|++++++|||||+|+|.|.+.++.............+++.|+....+++.||.
T Consensus 254 ~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~ 333 (364)
T 3p9c_A 254 FKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYE 333 (364)
T ss_dssp TTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBH
T ss_pred CCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCH
Confidence 99888779999999999999999999999999999999999999999876544333333445678888754458999999
Q ss_pred HHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 339 QEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 339 ~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
++|+++|++|||+.+++.+..+..+|||+||
T Consensus 334 ~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 334 REFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 9999999999999999999999999999998
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=5.2e-54 Score=406.53 Aligned_cols=348 Identities=49% Similarity=0.920 Sum_probs=304.6
Q ss_pred hhhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhc-CCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 22 ENEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKA-GPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~-~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
..+++++..+++++.+++.+++|++|+++||||.|.+. ||++|+|++|||++++..+|.+++.+.|+||+|++.|+|.+
T Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 95 (368)
T 3reo_A 16 SSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTY 95 (368)
T ss_dssp -CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCeEE
Confidence 46788999999999999999999999999999999885 54468999999999983223234599999999999999987
Q ss_pred cccC--CCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchH
Q 017595 101 SLSS--AGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRF 178 (369)
Q Consensus 101 ~~~~--~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~ 178 (369)
.... ++...++|++|+.++.++.+.++.++++++.+..++.++..|.+|.+++++|.++|+..+|.++|+|+.++++.
T Consensus 96 ~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~~~~~~~~g~~~~~~~~~~~~~ 175 (368)
T 3reo_A 96 TLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRI 175 (368)
T ss_dssp EEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCSCHHHHHSSSCHHHHHTTCHHH
T ss_pred ecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCCCHHHHHhCCCHHHHHhhCHHH
Confidence 4210 00013789999999998887766789998887777788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCC
Q 017595 179 NGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNM 258 (369)
Q Consensus 179 ~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~ 258 (369)
.+.|.++|...+......+++.++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+
T Consensus 176 ~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~ 255 (368)
T 3reo_A 176 NKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDM 255 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCT
T ss_pred HHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCC
Confidence 99999999998888888898888767788999999999999999999999999999999999999999889999999999
Q ss_pred CCCCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCH
Q 017595 259 FERIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTT 338 (369)
Q Consensus 259 ~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~ 338 (369)
++++|.+|+|++.++||+|+++++.++|++++++|+|||+|+|.|.+.++.............+++.|+....+++.||.
T Consensus 256 ~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~ 335 (368)
T 3reo_A 256 FDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTE 335 (368)
T ss_dssp TTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCH
T ss_pred CCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCH
Confidence 99888779999999999999999999999999999999999999999877644433334456778888765458999999
Q ss_pred HHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 339 QEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 339 ~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
++|+++|++|||+.+++.+..+..++||+||
T Consensus 336 ~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 336 KEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 9999999999999999999999999999997
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=2.9e-50 Score=378.49 Aligned_cols=339 Identities=22% Similarity=0.330 Sum_probs=290.7
Q ss_pred cccc-CCchhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHH
Q 017595 9 HKHK-HNEEEEEEEENEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDR 87 (369)
Q Consensus 9 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~ 87 (369)
||.. .-+.+..+.++..++...+++++.+++.+++|++++++||||+|.+ ||+|++|||+++|+ +++.++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~----g~~t~~elA~~~g~----~~~~l~r 74 (348)
T 3lst_A 3 HMQRQRPPSRAGGDMDRLQSALALYEEAMGYTYAAALRAAAAVGVADHLVD----GPRTPAELAAATGT----DADALRR 74 (348)
T ss_dssp -------------CCCHHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTT----SCBCHHHHHHHHTC----CHHHHHH
T ss_pred ccceeecCCcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhC----CCCCHHHHHHHhCc----CHHHHHH
Confidence 4444 3355566667888999999999999999999999999999999986 59999999999999 9999999
Q ss_pred HHHHHhcCccccccccCCCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCC
Q 017595 88 ILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMG 167 (369)
Q Consensus 88 ~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~ 167 (369)
||++|++.|+|++ ++++|++|+.++.+..+. +.++.+++.+...+.+++.|.+|++.+++|.++|+..+|.+
T Consensus 75 lLr~l~~~g~l~~-------~~~~y~~t~~s~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~ 146 (348)
T 3lst_A 75 VLRLLAVRDVVRE-------SDGRFALTDKGAALRSDS-PVPARAGILMFTDTMFWTMSHRVASALGPERPAFADIFGSS 146 (348)
T ss_dssp HHHHHHHTTSEEE-------ETTEEEECTTTGGGSTTS-SSCSHHHHHHHTSHHHHHHHHTHHHHTCTTCCCHHHHHSSC
T ss_pred HHHHHHhCCCEEe-------cCCEEecCHHHHHHhcCC-CccHHHHHHHhcCHHHHHHHHHHHHHHhcCCChhhHHhCCC
Confidence 9999999999997 258999999999886544 35688888776666678999999999999999999889988
Q ss_pred hhhhhhcCchHHHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC
Q 017595 168 VYEYAGNDSRFNGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS 247 (369)
Q Consensus 168 ~~e~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 247 (369)
+|+|+.++++....|...|...+......+++.++ +++..+|||||||+|.++..+++++|+++++++|++.++.....
T Consensus 147 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~ 225 (348)
T 3lst_A 147 LDAYFDGDAEVEALYYEGMETVSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRL 225 (348)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCC
T ss_pred HHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccc
Confidence 99999999999999999999998888889999887 88889999999999999999999999999999999877763221
Q ss_pred -----CCCceEEeCCCCCCCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhh
Q 017595 248 -----YRGVKHIGGNMFERIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMT 322 (369)
Q Consensus 248 -----~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~ 322 (369)
.+||+++.+|+++++|..|+|++.++||+|+++++.++|++++++|||||+|+|.|.+.++...+. ....+
T Consensus 226 ~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~----~~~~~ 301 (348)
T 3lst_A 226 DAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH----QSKEM 301 (348)
T ss_dssp CCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC----HHHHH
T ss_pred cccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc----hhhhc
Confidence 258999999999877855999999999999999999999999999999999999999877653321 23466
Q ss_pred hHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 323 DIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 323 d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
++.|+... +++.+|.++|.++|+++||+++++.+..+..++||++|
T Consensus 302 d~~~~~~~-~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 302 DFMMLAAR-TGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHHHHTT-SCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred ChhhhhcC-CCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 77777654 89999999999999999999999999888899999986
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=5.1e-50 Score=379.57 Aligned_cols=339 Identities=22% Similarity=0.385 Sum_probs=293.6
Q ss_pred ccccCCchhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHH
Q 017595 9 HKHKHNEEEEEEEENEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRI 88 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~ 88 (369)
||....+.+.............|++++.+++.+++|++++++||||.|.+ +|+|++|||+++|+ +++.++||
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~----g~~t~~eLA~~~g~----~~~~l~rl 91 (369)
T 3gwz_A 20 HMTVEQTPENPGTAARAAAEETVNDILQGAWKARAIHVAVELGVPELLQE----GPRTATALAEATGA----HEQTLRRL 91 (369)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTT----SCEEHHHHHHHHTC----CHHHHHHH
T ss_pred cceeccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcC----CCCCHHHHHHHHCc----CHHHHHHH
Confidence 44455666667767888999999999999999999999999999999986 59999999999999 99999999
Q ss_pred HHHHhcCccccccccCCCCCCcc-eecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCC
Q 017595 89 LRLLVTNRVLRCSLSSAGDNQRL-YSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMG 167 (369)
Q Consensus 89 L~~L~~~g~l~~~~~~~~~~~~~-y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~ 167 (369)
|++|++.|++.++ ++++ |.+|+.++.+..+. +.++.+++.+...+.++..|.+|.+.+++|.++|...+|.+
T Consensus 92 Lr~L~~~g~l~~~------~~~~~y~~t~~s~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~ 164 (369)
T 3gwz_A 92 LRLLATVGVFDDL------GHDDLFAQNALSAVLLPDP-ASPVATDARFQAAPWHWRAWEQLTHSVRTGEASFDVANGTS 164 (369)
T ss_dssp HHHHHHTTSSEEC------SSTTEEECCHHHHTTSCCT-TCHHHHHHHHHHSHHHHHHHHTHHHHHHHSSCSHHHHHSSC
T ss_pred HHHHHhCCCEEEe------CCCceEecCHHHHHHhcCC-chhHHHHHHHcCCHHHHHHHHhHHHHHhCCCChhHhhcCCC
Confidence 9999999999975 4578 99999999875443 35688888776666677899999999999999999889988
Q ss_pred hhhhhhcCchHHHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC
Q 017595 168 VYEYAGNDSRFNGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS 247 (369)
Q Consensus 168 ~~e~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 247 (369)
+|+|+.++++..+.|...|..........+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++
T Consensus 165 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 243 (369)
T 3gwz_A 165 FWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARE 243 (369)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHH
Confidence 99999999999999999999988888888999887 88889999999999999999999999999999999888887664
Q ss_pred -------CCCceEEeCCCCCCCCC-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhh
Q 017595 248 -------YRGVKHIGGNMFERIPK-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREA 319 (369)
Q Consensus 248 -------~~rv~~~~~d~~~~~p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~ 319 (369)
.++|+++.+|+++++|. .|+|++.++||+|+++++.++|++++++|+|||+|+|.|.+.++..... .
T Consensus 244 ~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-----~ 318 (369)
T 3gwz_A 244 LLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-----T 318 (369)
T ss_dssp HHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-----H
T ss_pred hhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-----h
Confidence 36899999999987775 4999999999999999999999999999999999999999987653321 3
Q ss_pred hhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEE-ecCceeEEEEeC
Q 017595 320 SMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYEC-FVCNFCIIEFIK 369 (369)
Q Consensus 320 ~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vi~~~~ 369 (369)
..+++.|+... +++.+|.++|.++|+++||+++++.+ ..+..+|||++|
T Consensus 319 ~~~d~~~~~~~-~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 319 LFVDLLLLVLV-GGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHHHHHHHHHH-SCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred hHhhHHHHhhc-CCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 46677777664 89999999999999999999999999 678899999986
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=2.5e-48 Score=366.77 Aligned_cols=341 Identities=29% Similarity=0.491 Sum_probs=290.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 23 NEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
+..++...|++++.+++.+++|++++++||||.|...+ +|+|++|||+++|+ +|.+++.++|||++|++.|+|.+..
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~--~~~t~~eLA~~~g~-~~~~~~~l~rlLr~L~~~gll~~~~ 82 (358)
T 1zg3_A 6 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHG--KPMTLSELASSLKL-HPSKVNILHRFLRLLTHNGFFAKTI 82 (358)
T ss_dssp CCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHT--SCEEHHHHHHHTTC-CTTTHHHHHHHHHHHHHTTSEEEEE
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcC--CCcCHHHHHHhcCC-CCcchHHHHHHHHHHhhCCcEEEec
Confidence 34566788999999999999999999999999998742 48999999999999 4446889999999999999998741
Q ss_pred c---C-CCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcC--CChhhhccCCChhhhhhcCc
Q 017595 103 S---S-AGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQG--GIPFNKVHGMGVYEYAGNDS 176 (369)
Q Consensus 103 ~---~-~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g--~~~~~~~~~~~~~e~~~~~~ 176 (369)
. + ++...++|++|+.++.++.+.+ .++++++.+..++.++..|.+|++.+++| .++|+..+|.++|+|+.+++
T Consensus 83 ~~~~~~~g~~~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p 161 (358)
T 1zg3_A 83 VKGKEGDEEEEIAYSLTPPSKLLISGKP-TCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDS 161 (358)
T ss_dssp ECCSSSSCCCEEEEEECHHHHTTCTTST-TCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGG
T ss_pred ccccccCCCCCCEEeCCHHHHHHhCCCC-ccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcCh
Confidence 0 0 0000479999999997776544 57888888776677788999999999998 67888888888999999999
Q ss_pred hHHH--HHHHHHHhhhhHhHHHHHHhcc-CcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceE
Q 017595 177 RFNG--VFNKAMLNHTSIVMNRILDSYN-GFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKH 253 (369)
Q Consensus 177 ~~~~--~~~~~m~~~~~~~~~~~~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~ 253 (369)
+..+ .|+..|...+.... .+++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.+++++
T Consensus 162 ~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~ 240 (358)
T 1zg3_A 162 ESSTLSMFQDAMASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNF 240 (358)
T ss_dssp GHHHHHHHHHHHHHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEE
T ss_pred hhhhHHHHHHHHhcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEE
Confidence 9999 99999998877666 7777772 266778999999999999999999999999999999999998888788999
Q ss_pred EeCCCCCCCCCCCEEEeccccccCChhHHHHHHHHHHHhCCC---CCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhh
Q 017595 254 IGGNMFERIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPE---NGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQF 330 (369)
Q Consensus 254 ~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 330 (369)
+.+|+++++|..|+|++.++||+|+++++.++|++++++|+| ||+++|.|...++....+........+++.|+...
T Consensus 241 ~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 320 (358)
T 1zg3_A 241 VGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMF 320 (358)
T ss_dssp EECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccC
Confidence 999999887777999999999999999999999999999999 99999999987665432111234556777777654
Q ss_pred cCCccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 331 SGGRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 331 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
+++.++.++|.++|+++||+++++.+..+..+|||++|
T Consensus 321 -~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 321 -LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp -SCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred -CCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 89999999999999999999999999888899999987
No 7
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=3.9e-48 Score=367.26 Aligned_cols=345 Identities=39% Similarity=0.732 Sum_probs=277.7
Q ss_pred hhHHHHHHH--HHHhhhhHHHHHHHHHHhChhHHHHhcC-CCCCCCHHHHHHhCCC--CCCCCcccHHHHHHHHhcCccc
Q 017595 24 EEDTYSFAM--QLAMSIVLPASMQAAAELGVFEIIAKAG-PGAKLSAAQIAAQMPS--RNPNTGVMLDRILRLLVTNRVL 98 (369)
Q Consensus 24 ~~~~~~~l~--~~~~~~~~~~~l~~a~~lglfd~L~~~~-~~~~~t~~~La~~~~~--~~~~~~~~l~~~L~~L~~~g~l 98 (369)
..++.+.++ +++.+++.+++|++++++||||.|.+.| |++++|++|||+++|+ ++|.+++.++|||++|++.|+|
T Consensus 19 ~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~gll 98 (372)
T 1fp1_D 19 QTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVL 98 (372)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTTSE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhCCce
Confidence 345666777 9999999999999999999999999742 1122999999999998 2454788999999999999999
Q ss_pred cccccCCCCC--CcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcC-CChhhhccCCChhhhhhcC
Q 017595 99 RCSLSSAGDN--QRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQG-GIPFNKVHGMGVYEYAGND 175 (369)
Q Consensus 99 ~~~~~~~~~~--~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g-~~~~~~~~~~~~~e~~~~~ 175 (369)
.+....+..+ .+.|++|+.++.++.+.+..++++++.+..++.++..|.+|++.++++ .++|+..+|.++|+|+.++
T Consensus 99 ~~~~~~~~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~~~~~~~ 178 (372)
T 1fp1_D 99 TSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKD 178 (372)
T ss_dssp EEEEEECTTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------------CCSSC
T ss_pred EecccccCCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhCCCHHHHHHhC
Confidence 8741000001 369999999997776544257888888776777888999999999998 8889888888899999999
Q ss_pred chHHHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEe
Q 017595 176 SRFNGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIG 255 (369)
Q Consensus 176 ~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~ 255 (369)
++....|...|...+......+++.++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++++++.
T Consensus 179 ~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~ 258 (372)
T 1fp1_D 179 KKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVG 258 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEE
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEe
Confidence 99999999999988887788888888657778999999999999999999999999999999999999998888999999
Q ss_pred CCCCCCCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCcc
Q 017595 256 GNMFERIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRE 335 (369)
Q Consensus 256 ~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 335 (369)
+|+++++|..|+|++.++||||+++++.++|++++++|+|||+++|.|.+.++.............+++.|+.. .+++.
T Consensus 259 ~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 337 (372)
T 1fp1_D 259 GDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFIT-VGGRE 337 (372)
T ss_dssp CCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHH-HSCCC
T ss_pred CCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhc-cCCcc
Confidence 99998777789999999999999999999999999999999999999998766543222222345667777654 37899
Q ss_pred CCHHHHHHHHHHcCCcceeEEEecCc-eeEEEEeC
Q 017595 336 RTTQEFMALANEAGFNGVNYECFVCN-FCIIEFIK 369 (369)
Q Consensus 336 ~t~~e~~~ll~~aGf~~~~~~~~~~~-~~vi~~~~ 369 (369)
++.++|.++|+++||+++++.+...+ .+|||++|
T Consensus 338 ~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 338 RTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 99999999999999999999985433 69999987
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=8e-49 Score=366.49 Aligned_cols=316 Identities=24% Similarity=0.384 Sum_probs=277.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCC
Q 017595 29 SFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDN 108 (369)
Q Consensus 29 ~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~ 108 (369)
..+++++.+++.+++|++|+++||||+|.+ ||+|++|||+++|+ +++.++|||++|++.|++.++ +
T Consensus 7 ~~l~~~~~g~~~~~~l~~a~~lglf~~l~~----g~~t~~elA~~~~~----~~~~l~rlLr~l~~~gl~~~~------~ 72 (332)
T 3i53_A 7 HIGLRALADLATPMAVRVAATLRVADHIAA----GHRTAAEIASAAGA----HADSLDRLLRHLVAVGLFTRD------G 72 (332)
T ss_dssp SSCHHHHTCCHHHHHHHHHHHHTHHHHHHT----TCCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEC------T
T ss_pred HHHHHHHHhhHHHHHHHHHHHcChHHHHhc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHhCCcEEec------C
Confidence 357889999999999999999999999986 59999999999999 999999999999999999975 4
Q ss_pred CcceecChhchhhhcCCCCCChHHHHHHhcChhHH-HHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHHHHHHHH
Q 017595 109 QRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAIL-DIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGVFNKAML 187 (369)
Q Consensus 109 ~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~m~ 187 (369)
+++|.+|+.++.+..+. ..++.+++.+...+..+ ..|.+|.+.+++|.++|+..+|.++|+|+.++++....|...|.
T Consensus 73 ~~~y~~t~~s~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~ 151 (332)
T 3i53_A 73 QGVYGLTEFGEQLRDDH-AAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQPAYPVRYGTSFWEDLGSDPVLSASFDTLMS 151 (332)
T ss_dssp TSBEEECTTGGGGSTTC-TTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSSCSHHHHHSSCHHHHHHHCHHHHHHHHHHHH
T ss_pred CCeEEcCHhHHHHhcCC-chhHHHHHHHcCCHhHHHHHHHHhHHHHhcCCCHHHHhhCCCHHHHHHhCHHHHHHHHHHHH
Confidence 68999999999886543 35678887665444455 78999999999999999888898899999999999999999999
Q ss_pred hhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC
Q 017595 188 NHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE 260 (369)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~ 260 (369)
..+....+.+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 230 (332)
T 3i53_A 152 HHLELDYTGIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFD 230 (332)
T ss_dssp HHHHHHHTTGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HhHHhhHHHHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCC
Confidence 888777777778777 77889999999999999999999999999999999888887764 2789999999998
Q ss_pred CCCC-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHH
Q 017595 261 RIPK-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQ 339 (369)
Q Consensus 261 ~~p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~ 339 (369)
++|. .|+|+++++||+|+++++.++|++++++|+|||+|+|.|.+.++. .+ ...+++.|+... +++.+|.+
T Consensus 231 ~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~------~~~~d~~~~~~~-~~~~~t~~ 302 (332)
T 3i53_A 231 PLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HA------GTGMDLRMLTYF-GGKERSLA 302 (332)
T ss_dssp CCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----C------CHHHHHHHHHHH-SCCCCCHH
T ss_pred CCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc------cHHHHHHHHhhC-CCCCCCHH
Confidence 7774 599999999999999999999999999999999999999987764 11 235677776654 89999999
Q ss_pred HHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 340 EFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 340 e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
+|.++|+++||+++++.+..+ .+|||++|
T Consensus 303 e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 303 ELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 999999999999999999988 99999975
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=6.1e-48 Score=363.30 Aligned_cols=336 Identities=26% Similarity=0.475 Sum_probs=288.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 23 NEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
+..++...+++++.+++.+++|++++++|||+.|...+ +|.|++|||+++|+ +|.+++.++|||++|++.|+|.+..
T Consensus 12 ~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~--~~~t~~ela~~~~~-~~~~~~~l~rlLr~L~~~gll~~~~ 88 (352)
T 1fp2_A 12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHG--KPISLSNLVSILQV-PSSKIGNVRRLMRYLAHNGFFEIIT 88 (352)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHT--SCEEHHHHHHHHTC-CGGGHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcC--CCccHHHHHHHhCc-CCCChHHHHHHHHHHHhCCeEEEec
Confidence 34577788999999999999999999999999998742 48999999999999 3434789999999999999998741
Q ss_pred cCCCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHh-cCCChhhhccCCChhhhhhcCchHHHH
Q 017595 103 SSAGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVL-QGGIPFNKVHGMGVYEYAGNDSRFNGV 181 (369)
Q Consensus 103 ~~~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~~~~~~~~~~~~e~~~~~~~~~~~ 181 (369)
+ +++.|++|+.++.++.+.+ .++++++.+..++.++..|.+|++.++ +|.++|+..+|.++|+|+.++++..+.
T Consensus 89 -~---~~~~y~~t~~s~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 163 (352)
T 1fp2_A 89 -K---EEESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTS 163 (352)
T ss_dssp -S---SSEEEEECHHHHTTSTTSS-SCCHHHHHHHTCHHHHHGGGGHHHHHTCSSCCHHHHHHSSCHHHHHHHCHHHHHH
T ss_pred -C---CCCeEeCCHHHHHHhCCCC-ccHHHHHHHhcCchHHHHHHHHHHHHHhcCCChHHHHcCCCHHHHHHhChHHHHH
Confidence 0 2479999999997775544 578888887767777889999999999 888899888898999999999999999
Q ss_pred HHHHHHhhhhHhHHHHHHhcc-CcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCCCC
Q 017595 182 FNKAMLNHTSIVMNRILDSYN-GFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFE 260 (369)
Q Consensus 182 ~~~~m~~~~~~~~~~~~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~ 260 (369)
|...|.......... ++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++++++.+|+++
T Consensus 164 f~~~m~~~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~ 242 (352)
T 1fp2_A 164 FNDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFT 242 (352)
T ss_dssp HHHHHHHTHHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTT
T ss_pred HHHHHHhcchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccC
Confidence 999999888766666 66662 2667789999999999999999999999999999999999999887889999999998
Q ss_pred CCCCCCEEEeccccccCChhHHHHHHHHHHHhCCC---CCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCC
Q 017595 261 RIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPE---NGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERT 337 (369)
Q Consensus 261 ~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t 337 (369)
++|..|+|++.++||||+++++.++|++++++||| ||+++|.|...++....+........+++.|+. . +++.++
T Consensus 243 ~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t 320 (352)
T 1fp2_A 243 SIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERN 320 (352)
T ss_dssp CCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEE
T ss_pred CCCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCC
Confidence 87778999999999999999999999999999999 999999999876643321112234456776665 4 588999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 338 TQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 338 ~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
.++|.++|+++||+.+++.+..+..+|||++|
T Consensus 321 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 321 EEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999999999888899999987
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.1e-47 Score=356.08 Aligned_cols=319 Identities=24% Similarity=0.373 Sum_probs=280.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCC
Q 017595 26 DTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSA 105 (369)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~ 105 (369)
.....+++++.+++.+++|++++++|||+.|.+ +|.|++|||+++|+ +++.++|+|++|++.|++.+.
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~----~~~t~~ela~~~~~----~~~~l~r~Lr~L~~~g~l~~~---- 74 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIES----GIDSDETLAAAVGS----DAERIHRLMRLLVAFEIFQGD---- 74 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHT----TCCSHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhC----CCCCHHHHHHHhCc----CHHHHHHHHHHHHhCCceEec----
Confidence 455789999999999999999999999999976 48999999999999 999999999999999999875
Q ss_pred CCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHHHHHH
Q 017595 106 GDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGVFNKA 185 (369)
Q Consensus 106 ~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 185 (369)
+++.|++|+.++.+. +. +.++++++.+...+.+ ..|.+|++.++++.++|+..+|.++|+|+.++++....|...
T Consensus 75 --~~~~y~~t~~s~~l~-~~-~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~ 149 (334)
T 2ip2_A 75 --TRDGYANTPTSHLLR-DV-EGSFRDMVLFYGEEFH-AAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLA 149 (334)
T ss_dssp --TTTEEEECHHHHTTS-SS-TTCSHHHHHHHTTHHH-HHTTTHHHHHHHCCCHHHHHHSSCHHHHHHHCHHHHHHHHHH
T ss_pred --CCCeEecCHHHHHHh-CC-CccHHHHHHHhcCchh-hHHHHHHHHHhcCCChhhhhcCCCHHHHHhhChHHHHHHHHH
Confidence 458999999999777 43 3568888877765544 889999999999999998888889999999999999999999
Q ss_pred HHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------CCceEEeCCC
Q 017595 186 MLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------RGVKHIGGNM 258 (369)
Q Consensus 186 m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~rv~~~~~d~ 258 (369)
| ..+......+++.++ +++ .+|||||||+|.++..+++++|+.+++++|+|.+++.+++. ++++++.+|+
T Consensus 150 m-~~~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 226 (334)
T 2ip2_A 150 M-KASNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDM 226 (334)
T ss_dssp H-GGGHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCT
T ss_pred H-HHHHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCC
Confidence 9 888777888888887 777 99999999999999999999999999999998777766542 6899999999
Q ss_pred CCCCCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCC
Q 017595 259 FERIPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERT 337 (369)
Q Consensus 259 ~~~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t 337 (369)
++++|.. |+|++.+++|+|+++++.++|++++++|+|||+++|.|...++...+ .....+++.|+... +++.++
T Consensus 227 ~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~t 301 (334)
T 2ip2_A 227 LQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS----PMSVLWDVHLFMAC-AGRHRT 301 (334)
T ss_dssp TTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC----HHHHHHHHHHHHHH-SCCCCB
T ss_pred CCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhHHhhhHhHhhC-CCcCCC
Confidence 9877764 99999999999999999999999999999999999999987654322 23345677776654 789999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 338 TQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 338 ~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
.++|.++++++||+++++.+.++..++|+++|
T Consensus 302 ~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 302 TEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 99999999999999999999988899999986
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=4.1e-45 Score=345.22 Aligned_cols=325 Identities=16% Similarity=0.220 Sum_probs=261.4
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 23 NEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
+..++...+++++.|++.+++|++++++||||.|...+ +|+|++|||+++|+ +++.++|||++|++.|+|++.
T Consensus 11 ~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~--~~~t~~eLA~~~g~----~~~~l~rlLr~l~~~g~l~~~- 83 (363)
T 3dp7_A 11 TAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKR--EGYTLQEISGRTGL----TRYAAQVLLEASLTIGTILLE- 83 (363)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCT--TCBCHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEEE-
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcC--CCCCHHHHHHHhCc----CHHHHHHHHHHHhhCCCeEec-
Confidence 45578889999999999999999999999999998732 59999999999999 999999999999999999863
Q ss_pred cCCCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccC--CChhhhhhcCchHHH
Q 017595 103 SSAGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHG--MGVYEYAGNDSRFNG 180 (369)
Q Consensus 103 ~~~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~--~~~~e~~~~~~~~~~ 180 (369)
+++|++|+.++.++.+.+ ...++.+ ..+.+++.|.+|++++++|.+++...+| .++|+++.++++..+
T Consensus 84 ------~~~y~~t~~s~~L~~~~~---~~~~~~~-~~~~~~~~~~~L~~~lr~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (363)
T 3dp7_A 84 ------EDRYVLAKAGWFLLNDKM---ARVNMEF-NHDVNYQGLFHLEEALLNGRPEGLKVFGEWPTIYEGLSQLPEQVQ 153 (363)
T ss_dssp ------TTEEEECHHHHHHHHCHH---HHHHHHH-HHHTTHHHHTTHHHHHHHSSCGGGGGTCCCSSHHHHGGGSCHHHH
T ss_pred ------CCEEecccchHHhhCCCc---ccchhee-ecHHhhhhHHHHHHHHhcCCCccccccCchHhHHHHHhhCHHHHH
Confidence 589999999987776532 2222222 2355688999999999999888887787 689999999988665
Q ss_pred ----HHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------C
Q 017595 181 ----VFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------R 249 (369)
Q Consensus 181 ----~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~ 249 (369)
.|...|.... ...++..+. ..+..+|||||||+|.++..+++++|+++++++|+|.+++.+++. +
T Consensus 154 ~~~~~f~~~~~~~~---~~~~l~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~ 229 (363)
T 3dp7_A 154 KSWFGFDHFYSDQS---FGKALEIVF-SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSE 229 (363)
T ss_dssp HHHHHHHHHTTCCC---CHHHHHHHG-GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGG
T ss_pred HHHHHHHHHhhhhh---HHHHHHHhc-ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCccc
Confidence 3555554432 223444433 346789999999999999999999999999999998888776542 5
Q ss_pred CceEEeCCCCCC---CCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchH-HHhhhhhhhH
Q 017595 250 GVKHIGGNMFER---IPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATA-AAREASMTDI 324 (369)
Q Consensus 250 rv~~~~~d~~~~---~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~-~~~~~~~~d~ 324 (369)
||+++.+|++++ +|.. |+|++.++||+|+++++.++|++++++|+|||+|+|.|.+.++...... ........++
T Consensus 230 ~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~ 309 (363)
T 3dp7_A 230 RIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYF 309 (363)
T ss_dssp GEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhH
Confidence 899999999984 6744 9999999999999999999999999999999999999998876543211 1111122333
Q ss_pred HHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEec-CceeEEEEeC
Q 017595 325 IMLMQFSGGRERTTQEFMALANEAGFNGVNYECFV-CNFCIIEFIK 369 (369)
Q Consensus 325 ~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~-~~~~vi~~~~ 369 (369)
.++. ..+++.+|.++|.++|++|||+++++.+.. .+.++|+++|
T Consensus 310 ~~~~-~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 310 TAMA-NGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp HHSS-CSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred Hhhh-CCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 3333 236789999999999999999999998765 5599999875
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=9.7e-45 Score=344.30 Aligned_cols=324 Identities=23% Similarity=0.376 Sum_probs=275.5
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccC
Q 017595 25 EDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSS 104 (369)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~ 104 (369)
+.....+++++.+++.+++|++++++|||+.|.. +|.|++|||+++|+ +++.++|+|++|++.|++.+.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~----~~~t~~eLA~~~g~----~~~~l~r~Lr~L~~~Gll~~~--- 82 (374)
T 1qzz_A 14 DQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA----GADTLAGLADRTDT----HPQALSRLVRHLTVVGVLEGG--- 82 (374)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT----TCCSHHHHHHHHTC----CHHHHHHHHHHHHHTTSEECC---
T ss_pred chHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhC----CCCCHHHHHHHhCc----CHHHHHHHHHHHhhCCCEEEe---
Confidence 4456789999999999999999999999999965 58999999999999 999999999999999999874
Q ss_pred CCCCCc--ceecChhchhhhcCCCCCChHHHHHHhcChhHH-HHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHH
Q 017595 105 AGDNQR--LYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAIL-DIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGV 181 (369)
Q Consensus 105 ~~~~~~--~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~ 181 (369)
+++ .|++|+.++.+..+.+ .+++.++.+...+..+ ..|..|.+.+++|.++|...+|.++|+++..+++....
T Consensus 83 ---~~~~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (374)
T 1qzz_A 83 ---EKQGRPLRPTRLGMLLADGHP-AQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVALADS 158 (374)
T ss_dssp ---CC-CCCCEECTTGGGGSTTCT-TCHHHHHCTTSHHHHHHGGGGGHHHHHHHSCCSHHHHHSSCHHHHHHHCHHHHHH
T ss_pred ---CCCCeEEEEChHHHhhcCCCc-ccHHHHHHHcCChhhHHHHHHHHHHHHhcCCChhhhhhCCCHHHHHhhChHHHHH
Confidence 345 9999999987776543 5788887765444455 78899999999999999888888999999999999999
Q ss_pred HHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------CCceEE
Q 017595 182 FNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------RGVKHI 254 (369)
Q Consensus 182 ~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~rv~~~ 254 (369)
|...|..........+++.++ +++..+|||||||+|.++..+++.+|+++++++|++.+++.+++. ++|+++
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 237 (374)
T 1qzz_A 159 FDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVA 237 (374)
T ss_dssp HHHTCGGGSTTTTHHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHhhHhHHHHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEE
Confidence 999998877777788888887 777899999999999999999999999999999998787766542 489999
Q ss_pred eCCCCCCCCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec--cCCCCCcchHHHhhhhhhhHHHHHhhc
Q 017595 255 GGNMFERIPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR--MPMVTPEATAAAREASMTDIIMLMQFS 331 (369)
Q Consensus 255 ~~d~~~~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~--~~~~~~~~~~~~~~~~~~d~~~~~~~~ 331 (369)
.+|+++++|.. |+|++.+++|+|+++++.++|++++++|+|||+++|.|. +.++... ......+++.|+...
T Consensus 238 ~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~~~~~~~~~~~~- 312 (374)
T 1qzz_A 238 EGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD----RFFSTLLDLRMLTFM- 312 (374)
T ss_dssp ECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-----------HHHHHHHHHHHHHHH-
T ss_pred eCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC----cchhhhcchHHHHhC-
Confidence 99999877764 999999999999999889999999999999999999998 7654321 123345666666554
Q ss_pred CCccCCHHHHHHHHHHcCCcceeEEEecCce-----eEEEEeC
Q 017595 332 GGRERTTQEFMALANEAGFNGVNYECFVCNF-----CIIEFIK 369 (369)
Q Consensus 332 ~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~-----~vi~~~~ 369 (369)
+++.++.++|.++|+++||+++++....+.. ++|+++|
T Consensus 313 ~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 313 GGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp SCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 7899999999999999999999999988877 9999875
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=5.3e-44 Score=337.54 Aligned_cols=324 Identities=21% Similarity=0.353 Sum_probs=277.8
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccC
Q 017595 25 EDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSS 104 (369)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~ 104 (369)
+...+.+++++.+++.+++|.+++++|||+.|.. +|.|++|||+++|+ +++.++|+|++|++.|+|.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~----~~~t~~ela~~~~~----~~~~l~r~L~~L~~~g~~~~~--- 85 (360)
T 1tw3_A 17 QIDALRTLIRLGSLHTPMVVRTAATLRLVDHILA----GARTVKALAARTDT----RPEALLRLIRHLVAIGLLEED--- 85 (360)
T ss_dssp CHHHHHHHHHHHCSHHHHHHHHHHHTTHHHHHHT----TCCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE---
T ss_pred ccchHHHHHHHHhHHHHHHHHHHHHhCHHHHHhC----CCCCHHHHHHHhCc----CHHHHHHHHHHHHHCCCEEec---
Confidence 3557888999999999999999999999999965 58999999999999 999999999999999999874
Q ss_pred CCCCCcceecChhchhhhcCCCCCChHHHHHHhcChh-HHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHHHH
Q 017595 105 AGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQA-ILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGVFN 183 (369)
Q Consensus 105 ~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~ 183 (369)
++++|++|+.+..+..+.+ .+++.++.+...+. .+..|.+|.+.+++|.++++..+|..+|+++..+++....|.
T Consensus 86 ---~~g~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~~~~~~~~~p~~~~~f~ 161 (360)
T 1tw3_A 86 ---APGEFVPTEVGELLADDHP-AAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFD 161 (360)
T ss_dssp ---ETTEEEECTTGGGGSTTST-TCHHHHTCTTSHHHHHGGGGGGHHHHHHHCCCCHHHHHSSCHHHHHHTCHHHHHHHH
T ss_pred ---CCCeEEeCHHHHHHhcCCc-hhHHHHHHHhcCchhHHHHHHHHHHHHHcCCCHHHHhcCCCHHHHHHhChHHHHHHH
Confidence 3579999999887776543 57777776554333 457889999999999988888888899999998999999999
Q ss_pred HHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------CCceEEeC
Q 017595 184 KAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------RGVKHIGG 256 (369)
Q Consensus 184 ~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~rv~~~~~ 256 (369)
..|..........+++.++ +.+..+|||||||+|.++..+++.+|+++++++|++.+++.+++. ++++++.+
T Consensus 162 ~~~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~ 240 (360)
T 1tw3_A 162 SLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEG 240 (360)
T ss_dssp HHHTTTTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHHhHHHHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeC
Confidence 9998887777788888887 777899999999999999999999999999999987777765531 48999999
Q ss_pred CCCCCCCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc-CCCCCcchHHHhhhhhhhHHHHHhhcCCc
Q 017595 257 NMFERIPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM-PMVTPEATAAAREASMTDIIMLMQFSGGR 334 (369)
Q Consensus 257 d~~~~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 334 (369)
|+++++|.. |+|++.+++|+|+++++.++|++++++|+|||+++|.|.. .++.... .....+++.|+... +++
T Consensus 241 d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~~~~~~~~~~~-~~~ 315 (360)
T 1tw3_A 241 DFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN----EQFTELDLRMLVFL-GGA 315 (360)
T ss_dssp CTTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS----HHHHHHHHHHHHHH-SCC
T ss_pred CCCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc----chhhhccHHHhhhc-CCc
Confidence 999877765 9999999999999999999999999999999999999988 6543221 12345566666554 789
Q ss_pred cCCHHHHHHHHHHcCCcceeEEEecCc-----eeEEEEeC
Q 017595 335 ERTTQEFMALANEAGFNGVNYECFVCN-----FCIIEFIK 369 (369)
Q Consensus 335 ~~t~~e~~~ll~~aGf~~~~~~~~~~~-----~~vi~~~~ 369 (369)
.++.++|.++|+++||+++++.+..+. .++|+++|
T Consensus 316 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 316 LRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 999999999999999999999988776 89999875
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=3.1e-43 Score=328.94 Aligned_cols=315 Identities=20% Similarity=0.246 Sum_probs=269.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCC
Q 017595 29 SFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDN 108 (369)
Q Consensus 29 ~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~ 108 (369)
+.+++++.+++.+++|++++++|||+.|.+ +|.|++|||+++|+ +++.++|||++|++.|+|++.
T Consensus 8 ~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~----~~~t~~ela~~~~~----~~~~l~r~L~~L~~~g~l~~~------- 72 (335)
T 2r3s_A 8 ALFFNTVNAYQRSAAIKAAVELNVFTAISQ----GIESSQSLAQKCQT----SERGMRMLCDYLVIIGFMTKQ------- 72 (335)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHTTHHHHHTT----SEECHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHhc----CCCCHHHHHHHhCC----CchHHHHHHHHHHhcCCeEec-------
Confidence 578999999999999999999999999986 48999999999999 999999999999999999863
Q ss_pred CcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHHHHHHHHh
Q 017595 109 QRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGVFNKAMLN 188 (369)
Q Consensus 109 ~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~m~~ 188 (369)
+++|++|+.+..++...++.++++++.+...+.++..|.+|.+.++++.++|+ . |+++.++++....|...|..
T Consensus 73 ~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~ 146 (335)
T 2r3s_A 73 AEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGGTAIS-----S-EGTLSPEHPVWVQFAKAMSP 146 (335)
T ss_dssp TTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTSCCST-----T-TGGGSTTCTHHHHHHHHSGG
T ss_pred CCEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCCCCCC-----C-cccccCCHHHHHHHHHHHHH
Confidence 58999999995444443345678887776555678889999999999877654 2 77888888889999999988
Q ss_pred hhhHhHHHHHHhccCc--CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------CCceEEeCCCC
Q 017595 189 HTSIVMNRILDSYNGF--EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------RGVKHIGGNMF 259 (369)
Q Consensus 189 ~~~~~~~~~~~~~~~~--~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~rv~~~~~d~~ 259 (369)
........+++.++ + .+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++. ++++++.+|++
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 147 MMANPAQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp GGHHHHHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred HHhhhHHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccc
Confidence 88877788888887 6 77789999999999999999999999999999998777766542 47999999999
Q ss_pred C-CCCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCC
Q 017595 260 E-RIPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERT 337 (369)
Q Consensus 260 ~-~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t 337 (369)
+ +++.. |+|++.+++|+++++++.++|++++++|+|||+++|.|...++..... .....+++.|+....+++.++
T Consensus 226 ~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t 302 (335)
T 2r3s_A 226 EVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYT 302 (335)
T ss_dssp TSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCC
T ss_pred cCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCC
Confidence 8 67765 999999999999999999999999999999999999999877643222 223456666666544789999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCceeEEEEe
Q 017595 338 TQEFMALANEAGFNGVNYECFVCNFCIIEFI 368 (369)
Q Consensus 338 ~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~ 368 (369)
.++|.++++++||+.+++.+..+..++++++
T Consensus 303 ~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 303 FAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 9999999999999999999988888877764
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=9.7e-43 Score=328.71 Aligned_cols=311 Identities=18% Similarity=0.297 Sum_probs=261.6
Q ss_pred hHHHHHHHHHHh-hhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccccc
Q 017595 25 EDTYSFAMQLAM-SIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLS 103 (369)
Q Consensus 25 ~~~~~~l~~~~~-~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~ 103 (369)
.+....+++++. +++.+++|++++++||||.|.+ +|.|++|||+++|+ +++.++|||++|++.|+|.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~----~~~t~~eLA~~~g~----~~~~l~rlLr~L~~~gll~~~-- 97 (359)
T 1x19_A 28 LNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAE----GPKDLATLAADTGS----VPPRLEMLLETLRQMRVINLE-- 97 (359)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTT----CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE--
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcC----CCCCHHHHHHHhCc----ChHHHHHHHHHHHhCCCeEee--
Confidence 455667788886 8999999999999999999986 48999999999999 999999999999999999974
Q ss_pred CCCCCCcceecChhchhhhcCCCC---CChHHHHHHhcChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCch---
Q 017595 104 SAGDNQRLYSLAPVAKYFVLNQDG---VSLCPLLAMAGDQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSR--- 177 (369)
Q Consensus 104 ~~~~~~~~y~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~--- 177 (369)
++.|++|+.+..++.+..+ .++++++.+. ...+++.|.+|++.++++.+ |+|+.++++
T Consensus 98 -----~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~----------~~~~~~~p~~~~ 161 (359)
T 1x19_A 98 -----DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN----------FKGQVPYPPVTR 161 (359)
T ss_dssp -----TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC----------CCCSSCSSCCSH
T ss_pred -----CCeEecCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC----------CcccccCchhhH
Confidence 4699999986655555444 5788877665 35677889999999998754 566777888
Q ss_pred HHHHHHHHHHhhhh-HhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CC
Q 017595 178 FNGVFNKAMLNHTS-IVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YR 249 (369)
Q Consensus 178 ~~~~~~~~m~~~~~-~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~ 249 (369)
....|...|..... .....+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+
T Consensus 162 ~~~~f~~~m~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~ 240 (359)
T 1x19_A 162 EDNLYFEEIHRSNAKFAIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVAD 240 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhccchhHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCC
Confidence 88999999999888 77888998887 78889999999999999999999999999999999888776653 25
Q ss_pred CceEEeCCCCC-CCCCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHH
Q 017595 250 GVKHIGGNMFE-RIPKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLM 328 (369)
Q Consensus 250 rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~ 328 (369)
|++++.+|+++ +++.+|+|++.+++|+|+++++.++|++++++|+|||+++|.|...++...+. ....+ .|+.
T Consensus 241 ~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~~--~~~~ 314 (359)
T 1x19_A 241 RMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPN----FDYLS--HYIL 314 (359)
T ss_dssp TEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCC----HHHHH--HHGG
T ss_pred CEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCch----HHHHH--HHHH
Confidence 79999999998 66666999999999999998899999999999999999999999876542111 11112 3333
Q ss_pred hhcCCcc----CCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 329 QFSGGRE----RTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 329 ~~~~~~~----~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
...+++. ++.++|.++|+++||+++++.+.. ..++++++|
T Consensus 315 ~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 315 GAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp GGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred hcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 3335777 999999999999999999999888 889999987
No 16
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=6.9e-43 Score=328.89 Aligned_cols=316 Identities=15% Similarity=0.218 Sum_probs=261.6
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 23 NEEDTYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
...+....+++++.+++.+++|++++++||||+|.. |+|++|||+++|+ +++.++|||++|++.|++++.
T Consensus 20 ~~l~~p~~l~~~~~~~~~~~~l~~a~~lgif~~l~~-----~~t~~elA~~~~~----~~~~l~rlLr~L~~~gll~~~- 89 (352)
T 3mcz_A 20 AALTSVVDLVKLSDQYRQSAILHYAVADKLFDLTQT-----GRTPAEVAASFGM----VEGKAAILLHALAALGLLTKE- 89 (352)
T ss_dssp CCCCSHHHHHHHHHTHHHHHHHHHHHHTTHHHHTTS-----CBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCChHHHhCC-----CCCHHHHHHHhCc----ChHHHHHHHHHHHHCCCeEec-
Confidence 334556669999999999999999999999999964 8999999999999 999999999999999999974
Q ss_pred cCCCCCCcceecChhchhhhcCCCCCChHHHHHHhcChhHHHHhhhhHHHHhcCCCh-hhhccCCChhhhhhcCchHHHH
Q 017595 103 SSAGDNQRLYSLAPVAKYFVLNQDGVSLCPLLAMAGDQAILDIWYKLADAVLQGGIP-FNKVHGMGVYEYAGNDSRFNGV 181 (369)
Q Consensus 103 ~~~~~~~~~y~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~-~~~~~~~~~~e~~~~~~~~~~~ 181 (369)
++.|.+|+.+..++.+..+.+++.++.+. ...+..|.+|++.+++|.+. |+. ..++..+++....
T Consensus 90 ------~~~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~------~~~~~~~~~~~~~ 155 (352)
T 3mcz_A 90 ------GDAFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQ------ESRFAHDTRARDA 155 (352)
T ss_dssp ------TTEEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSH------HHHTTTCHHHHHH
T ss_pred ------CCeeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCccc------ccccccCHHHHHH
Confidence 47899999999777666666787776543 34567889999999988654 222 1234678888899
Q ss_pred HHHHHHhhhhHhHHHHHHhccCcCC-cceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceE
Q 017595 182 FNKAMLNHTSIVMNRILDSYNGFEQ-IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKH 253 (369)
Q Consensus 182 ~~~~m~~~~~~~~~~~~~~~~~~~~-~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~ 253 (369)
|..+|...... +..+++.++ +.+ ..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+|+++
T Consensus 156 f~~~m~~~~~~-~~~~l~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~ 233 (352)
T 3mcz_A 156 FNDAMVRLSQP-MVDVVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEF 233 (352)
T ss_dssp HHHHHHHHHHH-HHHHHHTCG-GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEE
T ss_pred HHHHHHhhhhh-HHHHHHhCC-CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEE
Confidence 99999874433 457888887 666 89999999999999999999999999999999877766553 257999
Q ss_pred EeCCCCC-C--CCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHh
Q 017595 254 IGGNMFE-R--IPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQ 329 (369)
Q Consensus 254 ~~~d~~~-~--~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 329 (369)
+.+|+++ + .+.. |+|++.++||+|+++++.++|++++++|+|||+++|.|.+.++..... .....+++.|+..
T Consensus 234 ~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~ 310 (352)
T 3mcz_A 234 FEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTP---ALSADFSLHMMVN 310 (352)
T ss_dssp EECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSS---HHHHHHHHHHHHH
T ss_pred EeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCC---chHHHhhHHHHhh
Confidence 9999998 4 5654 999999999999999999999999999999999999999887754322 2345667777765
Q ss_pred hcCCccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 330 FSGGRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 330 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
..+++.++.++|.++|+++||++++.. .+..++++++|
T Consensus 311 ~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 311 TNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp STTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred CCCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 557899999999999999999999843 46688888876
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=1.7e-21 Score=174.75 Aligned_cols=164 Identities=16% Similarity=0.215 Sum_probs=123.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHhC--CCCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCC-CCCCCCEEEeccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRY--PHIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFE-RIPKGDAILMKWI 273 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p~~D~v~~~~v 273 (369)
++..+|||||||+|.++..+++++ |+++++++|+ +.+++.|++ ..+|+++.+|+.+ +++..|+|++..+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~ 148 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFT 148 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeee
Confidence 567899999999999999999985 6789999999 888887654 2589999999988 6766799999999
Q ss_pred cccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHH-------------HhhcCCccCCHHH
Q 017595 274 LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIML-------------MQFSGGRERTTQE 340 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~-------------~~~~~~~~~t~~e 340 (369)
||++++++...+|++++++|||||+|++.|.....+...... ......++... ....--...|.++
T Consensus 149 l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~ 227 (261)
T 4gek_A 149 LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGEL-LFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVET 227 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHH-HHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHH
T ss_pred eeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHH
Confidence 999999888899999999999999999999987664321100 00001111000 0000113468999
Q ss_pred HHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 341 FMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 341 ~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
+.++|++|||+.++++.-...++.+.++|
T Consensus 228 ~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 228 HKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp HHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 99999999999999876554455555665
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=1.1e-19 Score=160.49 Aligned_cols=174 Identities=17% Similarity=0.209 Sum_probs=130.2
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCC-CCCCC-CE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFE-RIPKG-DA 267 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~~-D~ 267 (369)
..+++.++...+..+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ ..+++++.+|+.+ +.+.. |+
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 112 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDM 112 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceE
Confidence 44555454334668999999999999999999999999999999 877776543 3589999999988 55544 99
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHH--------H----HhhcCCcc
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIM--------L----MQFSGGRE 335 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~--------~----~~~~~~~~ 335 (369)
|++..++||+++++...+|++++++|+|||++++.+...+........ ....+..... . ........
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENL-NKTIWRQYVENSGLTEEEIAAGYERSKLDKD 191 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHH-HHHHHHHHHHTSSCCHHHHHTTC----CCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhH-HHHHHHHHHHhcCCCHHHHHHHHHhcccccc
Confidence 999999999998888889999999999999999999887654211100 0000100000 0 00012345
Q ss_pred CCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 336 RTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 336 ~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
++.++|.++|++|||+.+++......++++..+|
T Consensus 192 ~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 192 IEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp CBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred cCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 6899999999999999999998888888776654
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.79 E-value=2.1e-19 Score=156.51 Aligned_cols=169 Identities=15% Similarity=0.215 Sum_probs=121.6
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~ 264 (369)
...+++.++ .+.. +|||||||+|.++..+++. ++.+++++|. +.+++.+++. ++++++.+|+.+ +++.
T Consensus 33 ~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 33 AENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 345555555 4443 9999999999999999998 8889999999 8877766542 589999999988 6664
Q ss_pred C--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhh-hhHHHHHhhcCCccCCHHHH
Q 017595 265 G--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASM-TDIIMLMQFSGGRERTTQEF 341 (369)
Q Consensus 265 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~t~~e~ 341 (369)
. |+|++..++||++ +...+|++++++|+|||++++.+...+.............. ..+..... .....++.++|
T Consensus 110 ~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 186 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWE--DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNR-KNISQENVERF 186 (219)
T ss_dssp TCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHH-HHSSHHHHHHH
T ss_pred ccccEEEECchHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhh-hccccCCHHHH
Confidence 3 9999999999994 45689999999999999999988654331100000000000 00111100 12344578999
Q ss_pred HHHHHHcCCcceeEEEecCceeEEEEe
Q 017595 342 MALANEAGFNGVNYECFVCNFCIIEFI 368 (369)
Q Consensus 342 ~~ll~~aGf~~~~~~~~~~~~~vi~~~ 368 (369)
.++|+++||+.+++.......+++...
T Consensus 187 ~~~l~~aGf~~v~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 187 QNVLDEIGISSYEIILGDEGFWIIISK 213 (219)
T ss_dssp HHHHHHHTCSSEEEEEETTEEEEEEBC
T ss_pred HHHHHHcCCCeEEEEecCCceEEEEec
Confidence 999999999999999888877765543
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.77 E-value=3.4e-18 Score=149.29 Aligned_cols=169 Identities=13% Similarity=0.144 Sum_probs=119.8
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--CCceEEeCCCCC-CCCCC-CEEEe
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--RGVKHIGGNMFE-RIPKG-DAILM 270 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~rv~~~~~d~~~-~~p~~-D~v~~ 270 (369)
.+++.+. .....+|||||||+|.++..+++. +.+++++|. +.+++.+++. .+++++.+|+.+ +.+.. |+|++
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 112 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVS 112 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEE
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEE
Confidence 3444443 345689999999999999999987 568999999 7777766543 489999999988 55543 99999
Q ss_pred ccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhh--hhhhHHHHHhhcCCccCCHHHHHHHHHHc
Q 017595 271 KWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREA--SMTDIIMLMQFSGGRERTTQEFMALANEA 348 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~t~~e~~~ll~~a 348 (369)
..++||+++++...+|++++++|||||++++.++..+............ ..+...... ......++.++|.++|+++
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a 191 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLAND-LQTEYYTRIPVMQTIFENN 191 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHH-HHHSCCCBHHHHHHHHHHT
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhh-cchhhcCCHHHHHHHHHHC
Confidence 9999999988877899999999999999999987654321100000000 000000000 0012345899999999999
Q ss_pred CCcceeEEEecCceeEEEEeC
Q 017595 349 GFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 349 Gf~~~~~~~~~~~~~vi~~~~ 369 (369)
||+++.+ ...+..+++.+.|
T Consensus 192 Gf~v~~~-~~~~~~w~~~~~~ 211 (220)
T 3hnr_A 192 GFHVTFT-RLNHFVWVMEATK 211 (220)
T ss_dssp TEEEEEE-ECSSSEEEEEEEE
T ss_pred CCEEEEe-eccceEEEEeehh
Confidence 9986654 4457778877653
No 21
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=5.6e-18 Score=147.77 Aligned_cols=155 Identities=15% Similarity=0.166 Sum_probs=125.1
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIPKG 265 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p~~ 265 (369)
..+++.++ .....+|||||||+|.++..+++.+ |+.+++++|. +.+++.+++. ++++++.+|+.+ +++..
T Consensus 27 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 45555555 6677899999999999999999996 8889999999 8887766542 589999999987 66543
Q ss_pred --CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 266 --DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 266 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
|+|++..++||+++ ...+|++++++|+|||++++.+.......... .....++.++|.+
T Consensus 106 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 166 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----------------PPEEVYSEWEVGL 166 (219)
T ss_dssp CEEEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----------------CGGGSCCHHHHHH
T ss_pred CeeEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCC-----------------chhcccCHHHHHH
Confidence 99999999999954 57899999999999999999988765432110 0122358999999
Q ss_pred HHHHcCCcceeEEEecCceeEEEEeC
Q 017595 344 LANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 344 ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
+++++||+++++.........+.++|
T Consensus 167 ~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 167 ILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 99999999999988887777777665
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.75 E-value=8.5e-18 Score=150.88 Aligned_cols=156 Identities=16% Similarity=0.285 Sum_probs=122.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----CCceEEeCCCCC-CCCCC--
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----RGVKHIGGNMFE-RIPKG-- 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~rv~~~~~d~~~-~~p~~-- 265 (369)
...+++.++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+
T Consensus 44 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 44 TKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 345666665 6677899999999999999999987 679999999 7777765543 689999999988 66543
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
|+|++..++||+++++...+|++++++|+|||++++.+...+...... . .... ... ..+...++.++|.+++
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~---~~~~-~~~--~~~~~~~~~~~~~~~l 193 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWD--D---EFKE-YVK--QRKYTLITVEEYADIL 193 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCC--H---HHHH-HHH--HHTCCCCCHHHHHHHH
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccch--H---HHHH-HHh--cCCCCCCCHHHHHHHH
Confidence 999999999999888899999999999999999999998665411110 0 0111 111 1245577999999999
Q ss_pred HHcCCcceeEEEec
Q 017595 346 NEAGFNGVNYECFV 359 (369)
Q Consensus 346 ~~aGf~~~~~~~~~ 359 (369)
+++||+++++....
T Consensus 194 ~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 194 TACNFKNVVSKDLS 207 (266)
T ss_dssp HHTTCEEEEEEECH
T ss_pred HHcCCeEEEEEeCC
Confidence 99999999887654
No 23
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=5.2e-18 Score=148.66 Aligned_cols=170 Identities=12% Similarity=0.059 Sum_probs=119.2
Q ss_pred hHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCC-
Q 017595 193 VMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPK- 264 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~- 264 (369)
..+.+.+.++ ...+|||||||+|.++..+++.++ +++++|. +.+++.+++. .+++++.+|+.+ +++.
T Consensus 28 ~~~~l~~~~~---~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 28 LEPLLMKYMK---KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHHSCC---SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTT
T ss_pred HHHHHHHhcC---CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCC
Confidence 3444555443 468999999999999999999887 8888898 7777766542 689999999988 6554
Q ss_pred C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcC-----------
Q 017595 265 G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSG----------- 332 (369)
Q Consensus 265 ~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 332 (369)
. |+|++..++|++..++..++|++++++|+|||++++.+...+..... ............+....+.
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPR-LKESLVVGQKYWISKVIPDQEERTVVIEFK 181 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGG-CCC---------CCEEEEETTTTEEEEEC-
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHH-HHhhhhcccceeecccccCccccEEEEEec
Confidence 3 99999999877777788899999999999999999987742211000 0000000000000000000
Q ss_pred ---------CccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 333 ---------GRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 333 ---------~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
...++ .+|.++|+++||+.+++........+|+++|
T Consensus 182 ~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 182 SEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp ----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred cchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 01112 4899999999999999999888888999886
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=3.4e-17 Score=145.03 Aligned_cols=150 Identities=19% Similarity=0.358 Sum_probs=114.5
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC---CCCCC--CEE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE---RIPKG--DAI 268 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~~p~~--D~v 268 (369)
..+...++.+++..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. +.++.+|+.+ +++.+ |+|
T Consensus 30 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 30 ARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp HHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEE
T ss_pred HHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEE
Confidence 344444443456789999999999999999988 457899999 8888877754 8999999876 55543 999
Q ss_pred EeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHc
Q 017595 269 LMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEA 348 (369)
Q Consensus 269 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~a 348 (369)
++..++||+++++...+|++++++|||||++++..+.... ... ... ...........+.++|.++++++
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-----~~~----~~~--~~~~~~~~~~~~~~~l~~~l~~a 174 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS-----LYS----LIN--FYIDPTHKKPVHPETLKFILEYL 174 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS-----HHH----HHH--HTTSTTCCSCCCHHHHHHHHHHH
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch-----hHH----HHH--HhcCccccccCCHHHHHHHHHHC
Confidence 9999999999888899999999999999999998765321 110 111 01111234567899999999999
Q ss_pred CCcceeEEEec
Q 017595 349 GFNGVNYECFV 359 (369)
Q Consensus 349 Gf~~~~~~~~~ 359 (369)
||+++++....
T Consensus 175 Gf~~~~~~~~~ 185 (240)
T 3dli_A 175 GFRDVKIEFFE 185 (240)
T ss_dssp TCEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 99999887654
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.74 E-value=1.3e-17 Score=145.20 Aligned_cols=159 Identities=13% Similarity=0.128 Sum_probs=112.8
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--CCceEEeCCCCCCCCC-C-CEE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--RGVKHIGGNMFERIPK-G-DAI 268 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~rv~~~~~d~~~~~p~-~-D~v 268 (369)
...+++.+.......+|||||||+|.++..+++. ..+++++|. +.+++.+++. ++++++.+|+.+..+. . |+|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v 111 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV 111 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE
Confidence 3445555543456679999999999999999998 568999998 8887776643 6899999999885443 3 999
Q ss_pred EeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcC-------CccCCHHHH
Q 017595 269 LMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSG-------GRERTTQEF 341 (369)
Q Consensus 269 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-------~~~~t~~e~ 341 (369)
++..++||+++++...+|++++++|+|||++++.+...+.......... ........ .... ....+.++|
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 188 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDS--EPEVAVRR-TLQDGRSFRIVKVFRSPAEL 188 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC--------------CEEEE-ECTTSCEEEEECCCCCHHHH
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhc--ccccceee-ecCCcchhhHhhcCCCHHHH
Confidence 9999999999887889999999999999999999987643211000000 00000000 0001 123589999
Q ss_pred HHHHHHcCCcceeEEE
Q 017595 342 MALANEAGFNGVNYEC 357 (369)
Q Consensus 342 ~~ll~~aGf~~~~~~~ 357 (369)
.++++++||++.....
T Consensus 189 ~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 189 TERLTALGWSCSVDEV 204 (218)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCEEEeeec
Confidence 9999999999544433
No 26
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.74 E-value=2.5e-17 Score=149.87 Aligned_cols=163 Identities=17% Similarity=0.239 Sum_probs=121.2
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~- 264 (369)
...+++.++ .....+|||||||+|.++..+++.++ .+++++|+ +.+++.+++. ++++++.+|+.+ +|.
T Consensus 53 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~ 129 (287)
T 1kpg_A 53 IDLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDEP 129 (287)
T ss_dssp HHHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCCC
T ss_pred HHHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCCC
Confidence 345666665 66778999999999999999997764 49999999 7777766432 589999999965 334
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcc-----hHHHhhhhhhhHHHHHhhcCCccCCHH
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEA-----TAAAREASMTDIIMLMQFSGGRERTTQ 339 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~t~~ 339 (369)
.|+|++..++||+++++...+|++++++|||||++++.+...+..... +.........++.....++++..++.+
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 209 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIP 209 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHH
T ss_pred eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHH
Confidence 499999999999987778899999999999999999999876442110 000000111122222224567788999
Q ss_pred HHHHHHHHcCCcceeEEEec
Q 017595 340 EFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 340 e~~~ll~~aGf~~~~~~~~~ 359 (369)
+|.++++++||+++++....
T Consensus 210 ~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 210 MVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp HHHHHHHTTTCEEEEEEECH
T ss_pred HHHHHHHhCCcEEEEEEeCc
Confidence 99999999999999987653
No 27
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.73 E-value=1.4e-17 Score=149.25 Aligned_cols=155 Identities=16% Similarity=0.330 Sum_probs=116.4
Q ss_pred hHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CCCC
Q 017595 193 VMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p~ 264 (369)
.+..+++.++ .....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ .+++.++.+|+.+ +++.
T Consensus 25 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 25 DLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp CHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 3456666665 56778999999999999999999875 8999998 888776653 2679999999988 7664
Q ss_pred C--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHH-HHhhcCCccCCHHHH
Q 017595 265 G--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIM-LMQFSGGRERTTQEF 341 (369)
Q Consensus 265 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~t~~e~ 341 (369)
+ |+|++..++||+++ ...+|++++++|||||++++.+...+..+ ... ....... .........++.++|
T Consensus 102 ~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~ 173 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPN--PASFVSEAYRVLKKGGQLLLVDNSAPEND---AFD---VFYNYVEKERDYSHHRAWKKSDW 173 (260)
T ss_dssp TCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSH---HHH---HHHHHHHHHHCTTCCCCCBHHHH
T ss_pred CCEEEEEEhhhhHhcCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCH---HHH---HHHHHHHHhcCccccCCCCHHHH
Confidence 3 99999999999965 46899999999999999999988765431 111 1111111 111113456789999
Q ss_pred HHHHHHcCCcceeEEEe
Q 017595 342 MALANEAGFNGVNYECF 358 (369)
Q Consensus 342 ~~ll~~aGf~~~~~~~~ 358 (369)
.++|+++||+++++...
T Consensus 174 ~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 174 LKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHTCEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEEe
Confidence 99999999998877654
No 28
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.72 E-value=1e-16 Score=146.90 Aligned_cols=164 Identities=20% Similarity=0.268 Sum_probs=124.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPKG 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~~ 265 (369)
+..+++.++ .....+|||||||+|.++..+++.++ .+++++|+ +.+++.+++. ++++++.+|+.+- +..
T Consensus 61 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 137 (302)
T 3hem_A 61 RKLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEP 137 (302)
T ss_dssp HHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCC
T ss_pred HHHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCC
Confidence 446666665 66778999999999999999999977 89999999 8887766542 4899999999764 443
Q ss_pred -CEEEeccccccCCh-------hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHH-----hhhhhhhHHHHHhhcC
Q 017595 266 -DAILMKWILHNWDD-------EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAA-----REASMTDIIMLMQFSG 332 (369)
Q Consensus 266 -D~v~~~~vlh~~~d-------~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~ 332 (369)
|+|++..++||+++ +....+|++++++|||||++++.+...+......... ......++.....+++
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 217 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPG 217 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTT
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCC
Confidence 99999999999954 5677999999999999999999998765431100000 0000112233323457
Q ss_pred CccCCHHHHHHHHHHcCCcceeEEEecC
Q 017595 333 GRERTTQEFMALANEAGFNGVNYECFVC 360 (369)
Q Consensus 333 ~~~~t~~e~~~ll~~aGf~~~~~~~~~~ 360 (369)
+..++.+++.++++++||+++++.....
T Consensus 218 ~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 218 GRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred CCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 7889999999999999999999876653
No 29
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.72 E-value=5.1e-17 Score=146.59 Aligned_cols=157 Identities=13% Similarity=0.127 Sum_probs=120.4
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCC-CCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p~ 264 (369)
...+++.++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .+++.++.+|+.+ +++.
T Consensus 50 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 50 TDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 456666666 6677899999999999999999887 689999999 777776543 2579999999988 6664
Q ss_pred C--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH
Q 017595 265 G--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM 342 (369)
Q Consensus 265 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~ 342 (369)
+ |+|++..++||+++. ..+|++++++|||||++++.+............ ...+.... .++....++.++|.
T Consensus 128 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~ 200 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKK----EAVDAFRA-GGGVLSLGGIDEYE 200 (273)
T ss_dssp TCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHH----HHHHHHHH-HHTCCCCCCHHHHH
T ss_pred CCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHH----HHHHHHHh-hcCccCCCCHHHHH
Confidence 3 999999999999654 689999999999999999999875432211110 11111111 12356778999999
Q ss_pred HHHHHcCCcceeEEEec
Q 017595 343 ALANEAGFNGVNYECFV 359 (369)
Q Consensus 343 ~ll~~aGf~~~~~~~~~ 359 (369)
++++++||+++++....
T Consensus 201 ~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 201 SDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHTTCEEEEEEECH
T ss_pred HHHHHcCCeEEEEEECc
Confidence 99999999999887654
No 30
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.72 E-value=1.4e-16 Score=147.19 Aligned_cols=163 Identities=18% Similarity=0.313 Sum_probs=122.2
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~- 264 (369)
...+++.++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++++.+|+.+ ++.
T Consensus 79 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 155 (318)
T 2fk8_A 79 VDLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAEP 155 (318)
T ss_dssp HHHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCCC
T ss_pred HHHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCCC
Confidence 446666665 6677899999999999999999886 569999999 8877766532 579999999866 233
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcch----H-HHhhhhhhhHHHHHhhcCCccCCHH
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEAT----A-AAREASMTDIIMLMQFSGGRERTTQ 339 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~----~-~~~~~~~~d~~~~~~~~~~~~~t~~ 339 (369)
.|+|++..++||+++++...+|++++++|+|||++++.++..+...... . ........++.....++++..++.+
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 235 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTE 235 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHH
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHH
Confidence 4999999999999888889999999999999999999998765421100 0 0000011122222223467788999
Q ss_pred HHHHHHHHcCCcceeEEEec
Q 017595 340 EFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 340 e~~~ll~~aGf~~~~~~~~~ 359 (369)
+|.++++++||+++++....
T Consensus 236 ~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 236 MMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHHHHHHHTTCBCCCCEECH
T ss_pred HHHHHHHhCCCEEEEEEecc
Confidence 99999999999999877653
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.71 E-value=1.5e-17 Score=148.40 Aligned_cols=149 Identities=19% Similarity=0.269 Sum_probs=116.4
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----CCceEEeCCCCC-CCCCC--C
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----RGVKHIGGNMFE-RIPKG--D 266 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~rv~~~~~d~~~-~~p~~--D 266 (369)
..+++.++ .....+|||||||+|.++..+++.. ..+++++|. +.+++.+++. +++.++.+|+.+ +++.. |
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEE
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeE
Confidence 45566565 5567899999999999999999886 457899998 7777765532 679999999987 55543 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
+|++.+++||+++++...+|++++++|+|||++++.+........ ..+ .......++.++|.++|+
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~l~ 226 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---------LVD-----KEDSSLTRSDIHYKRLFN 226 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------EEE-----TTTTEEEBCHHHHHHHHH
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------eec-----ccCCcccCCHHHHHHHHH
Confidence 999999999999888899999999999999999999975543211 000 011234578999999999
Q ss_pred HcCCcceeEEEec
Q 017595 347 EAGFNGVNYECFV 359 (369)
Q Consensus 347 ~aGf~~~~~~~~~ 359 (369)
++||+++++....
T Consensus 227 ~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 227 ESGVRVVKEAFQE 239 (254)
T ss_dssp HHTCCEEEEEECT
T ss_pred HCCCEEEEeeecC
Confidence 9999999887654
No 32
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.71 E-value=1e-16 Score=146.50 Aligned_cols=155 Identities=14% Similarity=0.201 Sum_probs=117.5
Q ss_pred HHHHHHhc---cCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-C
Q 017595 194 MNRILDSY---NGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-R 261 (369)
Q Consensus 194 ~~~~~~~~---~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~ 261 (369)
...+++.+ +.+....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++++.+|+.+ +
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 34555555 125677899999999999999999986 468999999 7777766542 579999999988 6
Q ss_pred CCCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHH
Q 017595 262 IPKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQ 339 (369)
Q Consensus 262 ~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~ 339 (369)
++.+ |+|++..++||+++ ...+|++++++|||||++++.++.......... ...+..... .....+.+
T Consensus 146 ~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~ 215 (297)
T 2o57_A 146 CEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSS------IQPILDRIK--LHDMGSLG 215 (297)
T ss_dssp SCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGG------GHHHHHHHT--CSSCCCHH
T ss_pred CCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHH------HHHHHHHhc--CCCCCCHH
Confidence 6643 99999999999976 679999999999999999999987654322110 111111111 23356899
Q ss_pred HHHHHHHHcCCcceeEEEec
Q 017595 340 EFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 340 e~~~ll~~aGf~~~~~~~~~ 359 (369)
+|.++++++||+++++....
T Consensus 216 ~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 216 LYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp HHHHHHHHTTEEEEEEEECH
T ss_pred HHHHHHHHCCCeEEEEEECc
Confidence 99999999999999887643
No 33
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.71 E-value=1.2e-17 Score=150.03 Aligned_cols=162 Identities=12% Similarity=0.088 Sum_probs=115.8
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC-CCCCC-CEEEecc-ccccCCh-
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE-RIPKG-DAILMKW-ILHNWDD- 279 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~~-D~v~~~~-vlh~~~d- 279 (369)
+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++ .+++.++.+|+.+ +.+.. |+|++.. ++||+++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCH
Confidence 568999999999999999998864 7888998 888877664 3689999999988 55444 9999998 9999965
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHH--------------------hhhhhhhHHHHHhhcC-------
Q 017595 280 EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAA--------------------REASMTDIIMLMQFSG------- 332 (369)
Q Consensus 280 ~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~------- 332 (369)
++...+|++++++|+|||++++.+...+..-...... ......++.+.....+
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHE 207 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEE
Confidence 5677999999999999999998755443321000000 0000000000000001
Q ss_pred ----CccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 333 ----GRERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 333 ----~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
.+.+|.++|.++|+++||+++++....+...+.+++|
T Consensus 208 ~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 208 ESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 2346899999999999999999877767666776664
No 34
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.71 E-value=8.9e-17 Score=142.32 Aligned_cols=153 Identities=16% Similarity=0.301 Sum_probs=115.5
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCCCC-
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIPKG- 265 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p~~- 265 (369)
..+++.+. .....+|||||||+|.++..+++.++ +++++|. +.+++.+++. +++.++.+|+.+ +++.+
T Consensus 11 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 11 GLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred chHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 34555555 66788999999999999999999875 7889998 7777766532 679999999987 66543
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhH-HHHHhhcCCccCCHHHHHH
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDI-IMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~t~~e~~~ 343 (369)
|+|++.+++||+++ ...+|++++++|+|||++++.+...+... ... ..... ...........++.++|.+
T Consensus 88 fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T 1xxl_A 88 FDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDP---VLD---EFVNHLNRLRDPSHVRESSLSEWQA 159 (239)
T ss_dssp EEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSH---HHH---HHHHHHHHHHCTTCCCCCBHHHHHH
T ss_pred EEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCCh---hHH---HHHHHHHHhccccccCCCCHHHHHH
Confidence 99999999999965 56899999999999999999998765431 111 11111 1111111345679999999
Q ss_pred HHHHcCCcceeEEEe
Q 017595 344 LANEAGFNGVNYECF 358 (369)
Q Consensus 344 ll~~aGf~~~~~~~~ 358 (369)
+|+++||+++++...
T Consensus 160 ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 160 MFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHCCCcEEEEEee
Confidence 999999998887654
No 35
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.70 E-value=1.8e-16 Score=143.09 Aligned_cols=140 Identities=19% Similarity=0.245 Sum_probs=109.5
Q ss_pred CcceEEEEcCCh---hHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCCC------------CC--
Q 017595 206 QIKQLVDVGGGL---GVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFER------------IP-- 263 (369)
Q Consensus 206 ~~~~vLDvG~G~---G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~~------------~p-- 263 (369)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.+++.+++ .++++++.+|+.++ ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 998888888899999999999 888887654 36899999999762 22
Q ss_pred CCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 264 KGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 264 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
..|+|++..+|||+++++...+|++++++|+|||+|++.+...+. +... ....+...... .....++.++|.+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~---~~~~---~~~~~~~~~~~-~~~~~~s~~ei~~ 229 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG---LPAQ---QKLARITRENL-GEGWARTPEEIER 229 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS---CHHH---HHHHHHHHHHH-SCCCCBCHHHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc---hHHH---HHHHHHHHhcC-CCCccCCHHHHHH
Confidence 349999999999999888899999999999999999999987532 1111 11222222211 2456789999999
Q ss_pred HHHHcCCccee
Q 017595 344 LANEAGFNGVN 354 (369)
Q Consensus 344 ll~~aGf~~~~ 354 (369)
+| +||++++
T Consensus 230 ~l--~G~~l~~ 238 (274)
T 2qe6_A 230 QF--GDFELVE 238 (274)
T ss_dssp TT--TTCEECT
T ss_pred Hh--CCCeEcc
Confidence 99 5998776
No 36
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=2.7e-17 Score=141.71 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=114.5
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC-CCCCC--CEEEeccccccCChhH
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE-RIPKG--DAILMKWILHNWDDEH 281 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d~~ 281 (369)
..+|||||||+|.++..+++. +.+++++|. +.+++.+++ .+++.++.+|+.+ +++.+ |+|++.+++||+++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 579999999999999999988 458999999 888877765 4789999999988 55543 9999999999998778
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEec-C
Q 017595 282 CLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECFV-C 360 (369)
Q Consensus 282 ~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~-~ 360 (369)
...+|++++++|+|||++++.....+..... .. .......++.++|.++|+++||+++++.... .
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~------~~--------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 185 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPM------YH--------PVATAYRWPLPELAQALETAGFQVTSSHWDPRF 185 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEE------CC--------SSSCEEECCHHHHHHHHHHTTEEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhh------hc--------hhhhhccCCHHHHHHHHHHCCCcEEEEEecCCC
Confidence 8999999999999999999988765432100 00 0112345789999999999999999987665 4
Q ss_pred ceeEEE
Q 017595 361 NFCIIE 366 (369)
Q Consensus 361 ~~~vi~ 366 (369)
++..+.
T Consensus 186 p~~~l~ 191 (203)
T 3h2b_A 186 PHAYLT 191 (203)
T ss_dssp SEEEEE
T ss_pred cchhhh
Confidence 455444
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.70 E-value=2.2e-16 Score=145.43 Aligned_cols=163 Identities=13% Similarity=0.065 Sum_probs=121.9
Q ss_pred HHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCC
Q 017595 186 MLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGN 257 (369)
Q Consensus 186 m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d 257 (369)
+..........+++.++.+....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++. ++++++.+|
T Consensus 97 ~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 175 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN 175 (312)
T ss_dssp HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 4444444455677766545677899999999999999999986 578999999 8887766542 579999999
Q ss_pred CCC-CCCCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCc
Q 017595 258 MFE-RIPKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGR 334 (369)
Q Consensus 258 ~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 334 (369)
+.+ +++.+ |+|++..++||++ ...+|++++++|||||++++.+........... .......... ...
T Consensus 176 ~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~ 245 (312)
T 3vc1_A 176 MLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS-----KWVSQINAHF--ECN 245 (312)
T ss_dssp TTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC-----HHHHHHHHHH--TCC
T ss_pred hhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchh-----HHHHHHHhhh--cCC
Confidence 988 66543 9999999999994 679999999999999999999987654321100 0111111111 223
Q ss_pred cCCHHHHHHHHHHcCCcceeEEEec
Q 017595 335 ERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 335 ~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
.++.++|.++++++||+++++....
T Consensus 246 ~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 246 IHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp CCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred CCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 6789999999999999999887653
No 38
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=2.5e-16 Score=141.30 Aligned_cols=152 Identities=14% Similarity=0.134 Sum_probs=114.6
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCCC--CEEEe
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPKG--DAILM 270 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~--D~v~~ 270 (369)
+.+.+.++ .....+|||||||+|.++..+++ ++.+++++|+ +.+++.++...+++++.+|+.+ +++.+ |+|++
T Consensus 24 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (261)
T 3ege_A 24 NAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVIS 100 (261)
T ss_dssp HHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEE
T ss_pred HHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEE
Confidence 34555555 56778999999999999999997 6789999999 8899988887899999999988 66543 99999
Q ss_pred ccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCC
Q 017595 271 KWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGF 350 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf 350 (369)
.+++||++ +...+|++++++|| ||++++.+...+..... +. ....... . .......++.+++. +|+++||
T Consensus 101 ~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~-~~---~~~~~~~-~-~~~~~~~~~~~~~~-~l~~aGF 170 (261)
T 3ege_A 101 ILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRI-WL---YDYFPFL-W-EDALRFLPLDEQIN-LLQENTK 170 (261)
T ss_dssp ESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCC-GG---GGTCHHH-H-HHHHTSCCHHHHHH-HHHHHHC
T ss_pred cchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHH-HH---HHHHHHH-h-hhhhhhCCCHHHHH-HHHHcCC
Confidence 99999994 46799999999999 99999998854332111 10 0111101 1 11123455778889 9999999
Q ss_pred cceeEEEec
Q 017595 351 NGVNYECFV 359 (369)
Q Consensus 351 ~~~~~~~~~ 359 (369)
+.+++....
T Consensus 171 ~~v~~~~~~ 179 (261)
T 3ege_A 171 RRVEAIPFL 179 (261)
T ss_dssp SEEEEEECC
T ss_pred CceeEEEec
Confidence 998886653
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.69 E-value=6.2e-17 Score=146.34 Aligned_cols=151 Identities=21% Similarity=0.375 Sum_probs=113.9
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CCCCC--CEEEeccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RIPKG--DAILMKWI 273 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p~~--D~v~~~~v 273 (369)
+....+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .++++++.+|+.+ +++.+ |+|++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 56778999999999999999999999999999999 888776654 2579999999987 55543 99999999
Q ss_pred cccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCC---CcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCC
Q 017595 274 LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVT---PEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGF 350 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf 350 (369)
+||+++. ..+|++++++|+|||++++.+...... +....... ....+.......++..++..+|.++|+++||
T Consensus 115 l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 190 (276)
T 3mgg_A 115 LEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIE--AWNCLIRVQAYMKGNSLVGRQIYPLLQESGF 190 (276)
T ss_dssp GGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHH--HHHHHHHHHHHTTCCTTGGGGHHHHHHHTTC
T ss_pred hhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHH--HHHHHHHHHHhcCCCcchHHHHHHHHHHCCC
Confidence 9999764 489999999999999999998643211 11111111 1111111111225666788899999999999
Q ss_pred cceeEEEe
Q 017595 351 NGVNYECF 358 (369)
Q Consensus 351 ~~~~~~~~ 358 (369)
+++++...
T Consensus 191 ~~v~~~~~ 198 (276)
T 3mgg_A 191 EKIRVEPR 198 (276)
T ss_dssp EEEEEEEE
T ss_pred CeEEEeeE
Confidence 99988654
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=1.5e-16 Score=142.15 Aligned_cols=152 Identities=15% Similarity=0.142 Sum_probs=115.0
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG 265 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~ 265 (369)
..++..+..+....+|||||||+|.++..+++.++. +++++|+ +.+++.+++. ++++++.+|+.+ +++..
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 345555544566789999999999999999999986 9999999 7777765432 469999999977 65543
Q ss_pred --CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 266 --DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 266 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
|+|++..++||++ ...+|++++++|+|||++++.+........... ....... . ....++.++|.+
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------~~~~~~~-~--~~~~~~~~~~~~ 181 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAE------IEDFWMD-A--YPEISVIPTCID 181 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHH------HHHHHHH-H--CTTCCBHHHHHH
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHH------HHHHHHH-h--CCCCCCHHHHHH
Confidence 9999999999983 468999999999999999999975333221111 1111111 1 233568999999
Q ss_pred HHHHcCCcceeEEEec
Q 017595 344 LANEAGFNGVNYECFV 359 (369)
Q Consensus 344 ll~~aGf~~~~~~~~~ 359 (369)
+++++||+++++...+
T Consensus 182 ~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 182 KMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHTTEEEEEEEECC
T ss_pred HHHHCCCeEEEEEECC
Confidence 9999999999987665
No 41
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=1.1e-16 Score=143.03 Aligned_cols=153 Identities=13% Similarity=0.072 Sum_probs=115.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~ 264 (369)
+..+++.++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++++.+|+.+ +.+.
T Consensus 25 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 25 YATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 345555565 6677899999999999999999987 678999999 8887766432 589999999988 4433
Q ss_pred C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 265 G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 265 ~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
. |+|++..++||+++ ..++|++++++|||||++++.+......+...... ..+. .......++.++|.+
T Consensus 103 ~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~ 172 (256)
T 1nkv_A 103 KCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIA--QACG------VSSTSDFLTLPGLVG 172 (256)
T ss_dssp CEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHH--HTTT------CSCGGGSCCHHHHHH
T ss_pred CCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHH--HHHh------cccccccCCHHHHHH
Confidence 3 99999999999964 56899999999999999999987654432211100 0000 011224578999999
Q ss_pred HHHHcCCcceeEEEe
Q 017595 344 LANEAGFNGVNYECF 358 (369)
Q Consensus 344 ll~~aGf~~~~~~~~ 358 (369)
+++++||+++++...
T Consensus 173 ~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 173 AFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHTTTBCCCEEEEC
T ss_pred HHHHCCCeeEEEEeC
Confidence 999999999887543
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=9.1e-17 Score=147.54 Aligned_cols=166 Identities=16% Similarity=0.173 Sum_probs=118.1
Q ss_pred cCCcceEEEEcCChhHHHHHHH-HhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC-CEEEecc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIIT-SRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG-DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~-D~v~~~~ 272 (369)
+....+|||||||+|.++..++ ...|+.+++++|+ +.+++.+++. ++++++.+|+.+ +++.. |+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 3467899999999999999996 6789999999999 8887766532 459999999988 55644 9999999
Q ss_pred ccccCChhH-HHHHHHHHHHhCCCCCEEEEEeccCCCCCcchH--H-----HhhhhhhhHHHHHhhcCC--ccCCHHHHH
Q 017595 273 ILHNWDDEH-CLTLLKNCYEAIPENGKIIIIDRMPMVTPEATA--A-----AREASMTDIIMLMQFSGG--RERTTQEFM 342 (369)
Q Consensus 273 vlh~~~d~~-~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~--~-----~~~~~~~d~~~~~~~~~~--~~~t~~e~~ 342 (369)
++||+++.. ...+|++++++|||||++++.+...+....... . ..........+......+ ..++.++|.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 999996544 457999999999999999998876543321100 0 000000001111111111 347999999
Q ss_pred HHHHHcCCcceeEEEec-CceeEEEEeC
Q 017595 343 ALANEAGFNGVNYECFV-CNFCIIEFIK 369 (369)
Q Consensus 343 ~ll~~aGf~~~~~~~~~-~~~~vi~~~~ 369 (369)
++|+++||+++++.... .....+.++|
T Consensus 276 ~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 99999999999998655 3344555554
No 43
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.68 E-value=1.6e-16 Score=142.99 Aligned_cols=151 Identities=15% Similarity=0.127 Sum_probs=115.5
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC-
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG- 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~- 265 (369)
.+++.++.+....+|||||||+|.++..+++. +..+++++|+ +.+++.+++. ++++++.+|+.+ +++.+
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCC
Confidence 44444443557789999999999999999998 8889999999 8877766542 679999999987 65543
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHH
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMAL 344 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~l 344 (369)
|+|++..++||++ ...+|++++++|||||++++.+........... ....... . ....++.++|.++
T Consensus 115 fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~------~~~~~~~-~--~~~~~~~~~~~~~ 182 (267)
T 3kkz_A 115 LDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAE------INDFWMD-A--YPEIDTIPNQVAK 182 (267)
T ss_dssp EEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH------HHHHHHH-H--CTTCEEHHHHHHH
T ss_pred EEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH------HHHHHHH-h--CCCCCCHHHHHHH
Confidence 9999999999993 468999999999999999999986433322211 1111111 1 2345689999999
Q ss_pred HHHcCCcceeEEEec
Q 017595 345 ANEAGFNGVNYECFV 359 (369)
Q Consensus 345 l~~aGf~~~~~~~~~ 359 (369)
++++||+++++...+
T Consensus 183 l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 183 IHKAGYLPVATFILP 197 (267)
T ss_dssp HHHTTEEEEEEEECC
T ss_pred HHHCCCEEEEEEECC
Confidence 999999999987765
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.68 E-value=2.1e-16 Score=143.63 Aligned_cols=160 Identities=14% Similarity=0.175 Sum_probs=113.9
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG-D 266 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~-D 266 (369)
.+++.+....+..+|||||||+|.++..+++.+|. .+++++|+ +.+++.+++. .+++++.+|+.+ +++.. |
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD 91 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYD 91 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEE
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCee
Confidence 34444433567789999999999999999999995 89999999 7777765432 379999999998 55554 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC-----C---CCCcchHHHhhhhhhhHHHHH-hhcCCccCC
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP-----M---VTPEATAAAREASMTDIIMLM-QFSGGRERT 337 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~-----~---~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~t 337 (369)
+|++..++|++++. ..+|++++++|+|||++++.++.. . ++...........+..+.... ...+....+
T Consensus 92 ~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (284)
T 3gu3_A 92 IAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNI 169 (284)
T ss_dssp EEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTG
T ss_pred EEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccH
Confidence 99999999999654 689999999999999999998751 0 111111110011111111111 111444556
Q ss_pred HHHHHHHHHHcCCcceeEEE
Q 017595 338 TQEFMALANEAGFNGVNYEC 357 (369)
Q Consensus 338 ~~e~~~ll~~aGf~~~~~~~ 357 (369)
..++.++|++|||+.+++..
T Consensus 170 ~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 170 GMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp GGTHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 78899999999999887743
No 45
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.67 E-value=1.2e-16 Score=138.51 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=109.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCCC-CEEEeccccccCChhH
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPKG-DAILMKWILHNWDDEH 281 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~~~d~~ 281 (369)
....+|||||||+|.++..+++. +.+++++|. +.+++.+++..++.++.+|+.+ +.+.. |+|++..++||+++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDE 119 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHH
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHH
Confidence 45689999999999999999987 568999999 8888877655578889999887 53333 9999999999999888
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcC-CcceeEEEec
Q 017595 282 CLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAG-FNGVNYECFV 359 (369)
Q Consensus 282 ~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aG-f~~~~~~~~~ 359 (369)
...+|++++++|+|||++++............ . ......++.++|.++|+++| |+++++....
T Consensus 120 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 120 LADVLKLIWRALKPGGLFYASYKSGEGEGRDK----L-----------ARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCSSCEECT----T-----------SCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEcCCCcccccc----c-----------chhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 99999999999999999999865443211000 0 00123468999999999999 9999886543
No 46
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.67 E-value=7.7e-17 Score=142.33 Aligned_cols=163 Identities=15% Similarity=0.126 Sum_probs=115.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-CCceEEeCCCCC-CCCCC-CEEEe-ccccccCCh
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-RGVKHIGGNMFE-RIPKG-DAILM-KWILHNWDD 279 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~rv~~~~~d~~~-~~p~~-D~v~~-~~vlh~~~d 279 (369)
.+..+|||||||+|.++..+++.++ +++++|. +.+++.+++. +++.++.+|+.+ +.+.. |+|++ ..++||+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 3568999999999999999999976 7888998 8887776643 689999999988 55444 99995 559999854
Q ss_pred -hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHh--------------------hhhhhhHHHHHhhcCC-----
Q 017595 280 -EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAR--------------------EASMTDIIMLMQFSGG----- 333 (369)
Q Consensus 280 -~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~--------------------~~~~~d~~~~~~~~~~----- 333 (369)
++...+|++++++|+|||++++.+...++......... ......+.++....++
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHF 196 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEE
Confidence 67789999999999999999998765543210000000 0000000000000011
Q ss_pred ------ccCCHHHHHHHHHHcCCcceeEEEecCceeEEEEeC
Q 017595 334 ------RERTTQEFMALANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 334 ------~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
+.+|.++|.++|+++||+++.+....+...+++++|
T Consensus 197 ~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 197 SDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 346899999999999998777665566778888775
No 47
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.67 E-value=1.7e-16 Score=145.26 Aligned_cols=173 Identities=11% Similarity=0.129 Sum_probs=118.4
Q ss_pred HhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC---------CCceEEeCCCCC-
Q 017595 192 IVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY---------RGVKHIGGNMFE- 260 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~rv~~~~~d~~~- 260 (369)
.....+++.++ . ...+|||||||+|.++..+++. +.+++++|+ +.+++.+++. .+++++.+|+.+
T Consensus 70 ~~~~~~~~~~~-~-~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 70 SEAREFATRTG-P-VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHHHHC-C-CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred HHHHHHHHhhC-C-CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 34556666665 2 3349999999999999999988 467999998 8888776542 579999999998
Q ss_pred CCCCC-CEEEec-cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcc--hHHHhhhhhhhHHHHH--------
Q 017595 261 RIPKG-DAILMK-WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEA--TAAAREASMTDIIMLM-------- 328 (369)
Q Consensus 261 ~~p~~-D~v~~~-~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~--~~~~~~~~~~d~~~~~-------- 328 (369)
+.+.. |+|++. .++|++++++...+|++++++|+|||+|++.....+..... .....+..........
T Consensus 146 ~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 225 (299)
T 3g2m_A 146 ALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAE 225 (299)
T ss_dssp CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEE
T ss_pred CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccc
Confidence 55554 988854 77888887788999999999999999999987654321000 0000000000000000
Q ss_pred -------------------hhcCCccCCHHHHHHHHHHcCCcceeEEEec------CceeEEEEe
Q 017595 329 -------------------QFSGGRERTTQEFMALANEAGFNGVNYECFV------CNFCIIEFI 368 (369)
Q Consensus 329 -------------------~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~------~~~~vi~~~ 368 (369)
.....+.++.++|.++|+++||+++++.+.. ....++|+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 226 EIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp EEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred cEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 0001124599999999999999999998876 224566654
No 48
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.67 E-value=9.3e-17 Score=142.29 Aligned_cols=138 Identities=20% Similarity=0.284 Sum_probs=110.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCCC-C-CEEEeccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIPK-G-DAILMKWILH 275 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p~-~-D~v~~~~vlh 275 (369)
...+|||||||+|.++..+++.+ ..+++++|. +.+++.+++. .++.++.+|+.+ +.+. . |+|++.+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 56899999999999999999887 568999998 8887766542 358999999877 5554 2 9999999999
Q ss_pred cCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeE
Q 017595 276 NWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 276 ~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 355 (369)
|++++....+|++++++|+|||++++.+...+.. . .++ .......++.++|.++|+++||+++++
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~--------~~~-----~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG--V--------ILD-----DVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS--E--------EEE-----TTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc--c--------eec-----ccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 9998888899999999999999999999875431 0 000 011333468999999999999999998
Q ss_pred EEec
Q 017595 356 ECFV 359 (369)
Q Consensus 356 ~~~~ 359 (369)
....
T Consensus 223 ~~~~ 226 (241)
T 2ex4_A 223 ERQE 226 (241)
T ss_dssp EECC
T ss_pred eecC
Confidence 7654
No 49
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=1.8e-16 Score=140.66 Aligned_cols=147 Identities=14% Similarity=0.171 Sum_probs=105.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-C-CceEEeCCCCCCCCC-C-CEEEeccccccCChh
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-R-GVKHIGGNMFERIPK-G-DAILMKWILHNWDDE 280 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~-rv~~~~~d~~~~~p~-~-D~v~~~~vlh~~~d~ 280 (369)
...+|||||||+|.++..+++.++ +++++|. +.+++.+++. . +++++.+|+.+..+. . |+|++.++|||+++.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH
Confidence 557899999999999999999877 6788888 7777766543 2 899999999874333 3 999999999999654
Q ss_pred HHHHHHHHHH-HhCCCCCEEEEEeccCCCCCcchHHHh-hhh---hhhH-HHHHhhcCCccCCHHHHHHHHHHcCCccee
Q 017595 281 HCLTLLKNCY-EAIPENGKIIIIDRMPMVTPEATAAAR-EAS---MTDI-IMLMQFSGGRERTTQEFMALANEAGFNGVN 354 (369)
Q Consensus 281 ~~~~~L~~~~-~~L~pgG~lli~e~~~~~~~~~~~~~~-~~~---~~d~-~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 354 (369)
..+|++++ ++|||||++++.++...... ..... ... ...+ ...........++.++|.++|+++||++++
T Consensus 120 --~~~l~~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 120 --VALLKRINDDWLAEGGRLFLVCPNANAVS--RQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp --HHHHHHHHHTTEEEEEEEEEEEECTTCHH--HHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred --HHHHHHHHHHhcCCCCEEEEEcCChHHHH--HHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 68999999 99999999999886533210 00000 000 0000 000011234567999999999999999998
Q ss_pred EEEe
Q 017595 355 YECF 358 (369)
Q Consensus 355 ~~~~ 358 (369)
+...
T Consensus 196 ~~~~ 199 (250)
T 2p7i_A 196 RSGI 199 (250)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 8643
No 50
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.66 E-value=6.8e-16 Score=136.55 Aligned_cols=141 Identities=19% Similarity=0.200 Sum_probs=108.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC---CCceEEeCCCCC-CCCCC--CEEEeccccccCC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY---RGVKHIGGNMFE-RIPKG--DAILMKWILHNWD 278 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~~~ 278 (369)
...+|||||||+|.++..+++. +.+++++|. +.+++.+++. .++.++.+|+.+ +++.. |+|++.+++||++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 5679999999999999999988 568999998 8887776653 789999999988 66543 9999999999995
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 279 DEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 279 d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
+ ...+|++++++|+|||++++.+.......... ..... .........++.+++.++++++||++++....
T Consensus 131 ~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 131 E--PLRALNEIKRVLKSDGYACIAILGPTAKPREN---SYPRL-----YGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp C--HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGG---GGGGG-----GTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred C--HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhh---hhhhh-----ccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 4 56899999999999999999986543321110 00000 00011234578999999999999999988754
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=7.9e-17 Score=134.78 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=114.1
Q ss_pred HHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCCCCCC--CCEEEeccc
Q 017595 198 LDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFERIPK--GDAILMKWI 273 (369)
Q Consensus 198 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~~p~--~D~v~~~~v 273 (369)
++.++ .....+|||||||+|.++..+++.+. +++++|. +.+++.+++ .++++++.+| .+++. .|+|++..+
T Consensus 10 ~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 10 LPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFANS 84 (170)
T ss_dssp HHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEESC
T ss_pred HHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEccc
Confidence 33344 55678999999999999999999874 8999998 777777655 4789999999 44443 399999999
Q ss_pred cccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcce
Q 017595 274 LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGV 353 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 353 (369)
+||+++ ...+|+++++.|+|||++++.+.......... .....++.++|.++++ ||+++
T Consensus 85 l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~--Gf~~~ 143 (170)
T 3i9f_A 85 FHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGP-----------------PLSIRMDEKDYMGWFS--NFVVE 143 (170)
T ss_dssp STTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-----------------CGGGCCCHHHHHHHTT--TEEEE
T ss_pred hhcccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCc-----------------hHhhhcCHHHHHHHHh--CcEEE
Confidence 999954 56899999999999999999998765432111 0122368999999998 99999
Q ss_pred eEEEecCceeEEEEe
Q 017595 354 NYECFVCNFCIIEFI 368 (369)
Q Consensus 354 ~~~~~~~~~~vi~~~ 368 (369)
++.........+.+.
T Consensus 144 ~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 144 KRFNPTPYHFGLVLK 158 (170)
T ss_dssp EEECSSTTEEEEEEE
T ss_pred EccCCCCceEEEEEe
Confidence 999888766666554
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.66 E-value=3.2e-16 Score=138.26 Aligned_cols=131 Identities=18% Similarity=0.160 Sum_probs=106.7
Q ss_pred ceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC-C-CEEEeccccccC
Q 017595 208 KQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK-G-DAILMKWILHNW 277 (369)
Q Consensus 208 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~-~-D~v~~~~vlh~~ 277 (369)
.+|||||||+|.++..+++ +..+++++|+ +.+++.+++. .+++++.+|+.+..+. . |+|++..++|++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 5999999999999999876 5678999999 7777766532 4699999999983333 3 999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEE
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYEC 357 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 357 (369)
++++...+|++++++|+|||++++.+......... .....+.++|.++|+++||+++++..
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG-------------------PPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC-------------------SSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC-------------------CCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 98889999999999999999999988755432110 11225799999999999999999877
Q ss_pred ec
Q 017595 358 FV 359 (369)
Q Consensus 358 ~~ 359 (369)
..
T Consensus 207 ~~ 208 (235)
T 3lcc_A 207 NP 208 (235)
T ss_dssp CT
T ss_pred cC
Confidence 65
No 53
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.66 E-value=2.3e-16 Score=136.16 Aligned_cols=142 Identities=8% Similarity=-0.015 Sum_probs=106.7
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------------------CCCceEEeC
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------------------YRGVKHIGG 256 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------~~rv~~~~~ 256 (369)
.++..+. .....+|||+|||+|..+..++++ +.+++++|+ +.+++.+++ ..+++++.+
T Consensus 13 ~~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 13 QYWSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 3344444 456789999999999999999988 468999999 888876643 257999999
Q ss_pred CCCC-CCC--C-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcC
Q 017595 257 NMFE-RIP--K-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSG 332 (369)
Q Consensus 257 d~~~-~~p--~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 332 (369)
|+++ +.+ . .|+|++..++|++++++..+++++++++|||||+++++....+... ....
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~------------------~~~~ 151 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL------------------LEGP 151 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS------------------SSSC
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc------------------cCCC
Confidence 9988 543 2 3999999999999988888999999999999999555543322110 0001
Q ss_pred CccCCHHHHHHHHHHcCCcceeEEEec
Q 017595 333 GRERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 333 ~~~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
....+.+++.+++++ ||+++.+....
T Consensus 152 ~~~~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 152 PFSVPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp CCCCCHHHHHHTSCS-SEEEEEEEESS
T ss_pred CCCCCHHHHHHHhcC-CcEEEEecccc
Confidence 122579999999988 99987765543
No 54
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.66 E-value=1.6e-15 Score=136.95 Aligned_cols=161 Identities=9% Similarity=0.075 Sum_probs=112.8
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hH------HHHhCCCC-------CCceEEeCC-C
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PH------VIQNAPSY-------RGVKHIGGN-M 258 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~------~~~~a~~~-------~rv~~~~~d-~ 258 (369)
..+++.++ .....+|||||||+|.++..+++++ |+.+++++|+ +. +++.+++. ++++++.+| +
T Consensus 33 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 33 LAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 45566565 6677899999999999999999995 8889999999 53 55544321 579999998 5
Q ss_pred CC---CCCC--CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhc--
Q 017595 259 FE---RIPK--GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFS-- 331 (369)
Q Consensus 259 ~~---~~p~--~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~-- 331 (369)
.. +++. .|+|++..++||+++.. .+++.++++++|||++++.+...+..................+.....
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSD 189 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCT
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccc
Confidence 43 3343 39999999999997764 478888888888999999998876543221111011111101110000
Q ss_pred -C--CccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 332 -G--GRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 332 -~--~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
. ...++.++|.++++++||+++++...
T Consensus 190 ~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 190 VANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp TCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 1 23579999999999999999887665
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.65 E-value=5.2e-16 Score=147.02 Aligned_cols=144 Identities=19% Similarity=0.295 Sum_probs=111.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCC--------------CCceEEeCCCCC-------C
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSY--------------RGVKHIGGNMFE-------R 261 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--------------~rv~~~~~d~~~-------~ 261 (369)
....+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. ++++++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999999986 8899999999 8888776543 689999999987 4
Q ss_pred CCCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHH
Q 017595 262 IPKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQ 339 (369)
Q Consensus 262 ~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~ 339 (369)
++.+ |+|++..++|++++ ...+|++++++|||||+|++.+.......... . ......... ..+..++.+
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~-----~~~~~~~~~-~~~~~~~~~ 232 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEA-A-----QQDPILYGE-CLGGALYLE 232 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHH-H-----HHCHHHHHT-TCTTCCBHH
T ss_pred CCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHh-H-----hhhHHHhhc-ccccCCCHH
Confidence 5543 99999999999965 56999999999999999999987654322111 0 011111111 234567899
Q ss_pred HHHHHHHHcCCcceeEEE
Q 017595 340 EFMALANEAGFNGVNYEC 357 (369)
Q Consensus 340 e~~~ll~~aGf~~~~~~~ 357 (369)
+|.++|+++||+.+++..
T Consensus 233 ~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 233 DFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHCCCceEEEEe
Confidence 999999999999887754
No 56
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.65 E-value=4e-16 Score=137.17 Aligned_cols=149 Identities=13% Similarity=0.138 Sum_probs=108.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----C-------CCceEEeCCCCC-CCCCC--CEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----Y-------RGVKHIGGNMFE-RIPKG--DAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-------~rv~~~~~d~~~-~~p~~--D~v~ 269 (369)
+...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ . .++.++.+|+.+ +++.. |+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 35689999999999999999988 568999998 777665543 1 258999999988 65543 9999
Q ss_pred eccccccCChh-HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhh--------------cCCc
Q 017595 270 MKWILHNWDDE-HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQF--------------SGGR 334 (369)
Q Consensus 270 ~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~--------------~~~~ 334 (369)
+..++|++++. ....+|++++++|+|||++++.+......... . .......+...... ....
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKL--Y-RKRYLHDFPITKEEGSFLARDPETGETEFIAH 183 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHH--H-HHHHHHHHHHHCSTTEEEEECTTTCCEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHH--H-HHHhhhhccchhhhcceEecccccCCcceeeE
Confidence 99999999754 36689999999999999999999876432211 1 11111111111000 0013
Q ss_pred cCCHHHHHHHHHHcCCcceeEEEe
Q 017595 335 ERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 335 ~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
.++.++|.++|+++||+++++...
T Consensus 184 ~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 184 HFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eCCHHHHHHHHHHcCCEEEEEEec
Confidence 569999999999999999988643
No 57
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.65 E-value=7.9e-16 Score=145.20 Aligned_cols=215 Identities=9% Similarity=-0.025 Sum_probs=140.1
Q ss_pred ChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhcCCCCCCh
Q 017595 51 GVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVLNQDGVSL 130 (369)
Q Consensus 51 glfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~~~~~~~~ 130 (369)
++|..| . +|.|+++||+.+|+ +++.+++||+.|++.|+++.. + + |++|+.+..++...+....
T Consensus 47 ~ll~~L-~----~~~t~~eLa~~~g~----~~~~v~~~L~~l~~~gll~~~------~-~-~~lt~~~~~~l~~~~~~~~ 109 (373)
T 2qm3_A 47 NVLSAV-L----ASDDIWRIVDLSEE----PLPLVVAILESLNELGYVTFE------D-G-VKLTEKGEELVAEYGIGKR 109 (373)
T ss_dssp HHHHHH-H----HCSCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEECS------S-S-SEECHHHHHHHHHHTCCCC
T ss_pred HHHHHh-c----CCCCHHHHHHHhCC----ChHHHHHHHHHHhhCCcEEEC------C-C-EEECHHHHHHHHhcCcccc
Confidence 779988 4 38999999999999 999999999999999999863 2 4 9999987755433211111
Q ss_pred HHHH-HHhc-----ChhHHHHhhhhHHHHhcCCChhhhccCCChhhhhhcCchHHHHHHHHHHhhhhHhHHHHHHhccCc
Q 017595 131 CPLL-AMAG-----DQAILDIWYKLADAVLQGGIPFNKVHGMGVYEYAGNDSRFNGVFNKAMLNHTSIVMNRILDSYNGF 204 (369)
Q Consensus 131 ~~~~-~~~~-----~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~ 204 (369)
.+.+ .... ...+...|..+.+.++....+. ..+.. ....++ ....... .... .. .
T Consensus 110 ~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~-----~~~~~~--~~~~~~l---------~~~~-~~-~ 170 (373)
T 2qm3_A 110 YDFTCPHCQGKTVDLQAFADLLEQFREIVKDRPEPL-HEFDQ-----AYVTPE--TTVARVI---------LMHT-RG-D 170 (373)
T ss_dssp CC------------CGGGHHHHHHHHHHHTTCCCCC-GGGTC-----CCBCHH--HHHHHHH---------HHHH-TT-C
T ss_pred ccccchhhcCCCcchhhhHHHHHHHHHHHhcCCccc-hhcCC-----eecCHH--HHHHHHH---------HHhh-cC-C
Confidence 0000 0000 1111223445555555432211 01110 000111 1111100 0011 11 2
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCCC----C-CEEEecc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIPK----G-DAILMKW 272 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p~----~-D~v~~~~ 272 (369)
....+|||+| |+|.++..++...|+.+++++|+ +.+++.+++. .+++++.+|+.+++|. . |+|++..
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 2457999999 99999999999988889999999 8888877642 3899999999885442 3 9999988
Q ss_pred ccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 273 ILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 273 vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.++.. ....++++++++|+|||++++.+..
T Consensus 250 p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PETLE---AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSSHH---HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCchH---HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 76654 2478999999999999977666654
No 58
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.65 E-value=7.1e-16 Score=134.30 Aligned_cols=142 Identities=14% Similarity=0.110 Sum_probs=103.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----------CCceEEeCCCCC-CCC--CCCEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----------RGVKHIGGNMFE-RIP--KGDAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~rv~~~~~d~~~-~~p--~~D~v~ 269 (369)
....+|||||||+|.++..+++.+|..+++++|. +.+++.+++. ++++++.+|+.. +.+ ..|+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 3567999999999999999999999899999999 8887766532 289999999865 333 239999
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH----HHH
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM----ALA 345 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~----~ll 345 (369)
+..++||+++++..++|++++++|||||.+++..... ....+......... .......++.+++. +++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 179 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE-------YNVKFANLPAGKLR-HKDHRFEWTRSQFQNWANKIT 179 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH-------HHHHTC------------CCSCBCHHHHHHHHHHHH
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc-------cchhhccccccccc-ccccccccCHHHHHHHHHHHH
Confidence 9999999988888999999999999999777655421 00000000000000 01123446889988 889
Q ss_pred HHcCCccee
Q 017595 346 NEAGFNGVN 354 (369)
Q Consensus 346 ~~aGf~~~~ 354 (369)
+++||+++.
T Consensus 180 ~~~Gf~v~~ 188 (217)
T 3jwh_A 180 ERFAYNVQF 188 (217)
T ss_dssp HHSSEEEEE
T ss_pred HHcCceEEE
Confidence 999998644
No 59
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.65 E-value=7.3e-16 Score=134.38 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=103.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----------CCceEEeCCCCC-CCCC--CCEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----------RGVKHIGGNMFE-RIPK--GDAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~rv~~~~~d~~~-~~p~--~D~v~ 269 (369)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++. ++++++.+|+.. +.+. .|+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 3567999999999999999999999899999999 8888776542 289999999966 4332 39999
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH----HHH
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM----ALA 345 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~----~ll 345 (369)
+..++||+++++..++|++++++|||||.+++......... +......... .......++.+++. +++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~l~ 179 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFH-------YGNLFEGNLR-HRDHRFEWTRKEFQTWAVKVA 179 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGC-------CCCT-----G-GGCCTTSBCHHHHHHHHHHHH
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhh-------hcccCccccc-ccCceeeecHHHHHHHHHHHH
Confidence 99999999988888999999999999996665544211000 0000000011 11123346888888 888
Q ss_pred HHcCCccee
Q 017595 346 NEAGFNGVN 354 (369)
Q Consensus 346 ~~aGf~~~~ 354 (369)
+++||++.-
T Consensus 180 ~~~Gf~v~~ 188 (219)
T 3jwg_A 180 EKYGYSVRF 188 (219)
T ss_dssp HHHTEEEEE
T ss_pred HHCCcEEEE
Confidence 999997544
No 60
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=1.2e-15 Score=138.16 Aligned_cols=155 Identities=15% Similarity=0.149 Sum_probs=112.8
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-CCceEEeCCCCC-CCCCC-CEEEe
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-RGVKHIGGNMFE-RIPKG-DAILM 270 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~rv~~~~~d~~~-~~p~~-D~v~~ 270 (369)
..+++.++ .....+|||||||+|.++..+++ +..+++++|+ +.+++.+++. +++.++.+|+.+ +++.. |+|++
T Consensus 47 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 123 (279)
T 3ccf_A 47 EDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFS 123 (279)
T ss_dssp CHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEE
Confidence 34455554 55678999999999999999998 7789999999 8887776543 789999999988 55544 99999
Q ss_pred ccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHH------hhcCCccCCHHHHHHH
Q 017595 271 KWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLM------QFSGGRERTTQEFMAL 344 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~~~t~~e~~~l 344 (369)
.+++|++++ ...+|++++++|+|||++++..+..... .... .......... .......++.++|.++
T Consensus 124 ~~~l~~~~d--~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (279)
T 3ccf_A 124 NAMLHWVKE--PEAAIASIHQALKSGGRFVAEFGGKGNI--KYIL---EALYNALETLGIHNPQALNPWYFPSIGEYVNI 196 (279)
T ss_dssp ESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECTTTT--HHHH---HHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHH
T ss_pred cchhhhCcC--HHHHHHHHHHhcCCCcEEEEEecCCcch--HHHH---HHHHHHHHhcCCccccCcCceeCCCHHHHHHH
Confidence 999999965 4689999999999999999877643221 1111 1111111100 0001235689999999
Q ss_pred HHHcCCcceeEEEec
Q 017595 345 ANEAGFNGVNYECFV 359 (369)
Q Consensus 345 l~~aGf~~~~~~~~~ 359 (369)
|+++||+++++....
T Consensus 197 l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 197 LEKQGFDVTYAALFN 211 (279)
T ss_dssp HHHHTEEEEEEEEEE
T ss_pred HHHcCCEEEEEEEec
Confidence 999999998875543
No 61
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=7.7e-16 Score=137.61 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=110.7
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC-CCCC-C-CEEE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE-RIPK-G-DAIL 269 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~-~-D~v~ 269 (369)
..+++.++ .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .+++.++.+|+.+ + +. . |+|+
T Consensus 23 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~ 100 (259)
T 2p35_A 23 RDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLY 100 (259)
T ss_dssp HHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEE
T ss_pred HHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEE
Confidence 35566565 55678999999999999999999999999999999 888877764 4789999999987 5 43 3 9999
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhh---hhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREAS---MTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~---~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
+..++|++++ ...+|++++++|+|||++++..+................ +...............+.++|.++|+
T Consensus 101 ~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 178 (259)
T 2p35_A 101 ANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALS 178 (259)
T ss_dssp EESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHG
T ss_pred EeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHH
Confidence 9999999954 568999999999999999998864322110000000000 00000000001234578999999999
Q ss_pred HcCCcce
Q 017595 347 EAGFNGV 353 (369)
Q Consensus 347 ~aGf~~~ 353 (369)
++||++.
T Consensus 179 ~aGf~v~ 185 (259)
T 2p35_A 179 PKSSRVD 185 (259)
T ss_dssp GGEEEEE
T ss_pred hcCCceE
Confidence 9999743
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.63 E-value=2.8e-15 Score=132.58 Aligned_cols=159 Identities=16% Similarity=0.169 Sum_probs=108.8
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC---CCceEEeCCCCC-CCCC-C-CEE
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY---RGVKHIGGNMFE-RIPK-G-DAI 268 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~rv~~~~~d~~~-~~p~-~-D~v 268 (369)
.+...++ .....+|||||||+|.++..+++... .+++++|. +.+++.+++. .++.++.+|+.+ +++. . |+|
T Consensus 34 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 34 ALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp HHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEE
Confidence 4555554 44668999999999999999998743 38899998 7777766543 479999999987 5554 3 999
Q ss_pred EeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCC--CCcchHHH--------hhhhhh-----hHHHHHhhcCC
Q 017595 269 LMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMV--TPEATAAA--------REASMT-----DIIMLMQFSGG 333 (369)
Q Consensus 269 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~--~~~~~~~~--------~~~~~~-----d~~~~~~~~~~ 333 (369)
++..++||+++ ...+|++++++|+|||++++....... .....+.. ...... ...........
T Consensus 112 ~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (243)
T 3bkw_A 112 YSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVK 189 (243)
T ss_dssp EEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCE
T ss_pred EEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEE
Confidence 99999999954 568999999999999999997642100 00000000 000000 00001001122
Q ss_pred ccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 334 RERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 334 ~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
..++.++|.++|+++||+++++...
T Consensus 190 ~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 190 HHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp EECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EeccHHHHHHHHHHcCCEeeeeccC
Confidence 3468999999999999999988754
No 63
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=1.9e-15 Score=137.21 Aligned_cols=157 Identities=18% Similarity=0.176 Sum_probs=112.0
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-C-CC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-R-IP 263 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~-~p 263 (369)
+..++..++ . ...+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++++.+|+.+ + ++
T Consensus 58 l~~~l~~~~-~-~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 58 LDRVLAEMG-P-QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL 133 (285)
T ss_dssp HHHHHHHTC-S-SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC
T ss_pred HHHHHHhcC-C-CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc
Confidence 345566554 2 3579999999999999999988 568999999 8787766542 679999999987 3 34
Q ss_pred C-C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHh-------hcCCc
Q 017595 264 K-G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQ-------FSGGR 334 (369)
Q Consensus 264 ~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~~ 334 (369)
. . |+|++..++||+++ ...+|++++++|||||++++......... ................ .....
T Consensus 134 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLL---MHNMVAGNFDYVQAGMPKKKKRTLSPDY 208 (285)
T ss_dssp SSCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHH---HHHHHTTCHHHHHTTCCCC----CCCSC
T ss_pred CCCceEEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHH---HHHHHhcCHHHHhhhccccccccCCCCC
Confidence 3 3 99999999999965 46899999999999999999876432100 0000000000010000 01124
Q ss_pred cCCHHHHHHHHHHcCCcceeEEEec
Q 017595 335 ERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 335 ~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
.++.++|.++|+++||+++++....
T Consensus 209 ~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 209 PRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp CBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCCHHHHHHHHHHCCCceeeeeeEE
Confidence 5689999999999999999887764
No 64
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.62 E-value=1.8e-15 Score=134.83 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=110.3
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---CCCceEEeCCCCC-CCCCC--CE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---YRGVKHIGGNMFE-RIPKG--DA 267 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p~~--D~ 267 (369)
..+.+.++ .....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++.. |+
T Consensus 34 ~~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 34 HELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 34555554 446789999999999999999998765 8999998 777776654 3689999999987 66543 99
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCC-----------CCcchHHHhhhhhhh-----HHHHHhhc
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMV-----------TPEATAAAREASMTD-----IIMLMQFS 331 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~-----------~~~~~~~~~~~~~~d-----~~~~~~~~ 331 (369)
|++..++||++ +...+|++++++|+|||++++....... .............++ ........
T Consensus 112 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (253)
T 3g5l_A 112 VLSSLALHYIA--SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDV 189 (253)
T ss_dssp EEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEE
T ss_pred EEEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccC
Confidence 99999999994 4679999999999999999987442100 000000000000000 00000000
Q ss_pred CCccCCHHHHHHHHHHcCCcceeEEEec
Q 017595 332 GGRERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 332 ~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
....+|.++|.++|+++||+++++....
T Consensus 190 ~~~~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 190 QKYHRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp EEECCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred ccEecCHHHHHHHHHHcCCeeeeeecCC
Confidence 1123499999999999999999987543
No 65
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.62 E-value=3.8e-15 Score=126.86 Aligned_cols=132 Identities=19% Similarity=0.254 Sum_probs=107.3
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC-CCCC-C-CEEEe
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE-RIPK-G-DAILM 270 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~-~-D~v~~ 270 (369)
.++..+ .....+|||||||+|.++..+++. +.+++++|. +.+++.+++ .+++.++.+|+.+ +++. . |+|++
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEE
Confidence 455544 346689999999999999999987 568999998 777776654 3679999999988 5653 3 99999
Q ss_pred c-cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcC
Q 017595 271 K-WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAG 349 (369)
Q Consensus 271 ~-~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aG 349 (369)
. .++|++++++...+|+++++.|+|||++++..... ..++.++|.++++++|
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~---------------------------~~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG---------------------------RGWVFGDFLEVAERVG 166 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT---------------------------SSCCHHHHHHHHHHHT
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC---------------------------CCcCHHHHHHHHHHcC
Confidence 8 89999988888999999999999999999865321 1256889999999999
Q ss_pred CcceeEEEe
Q 017595 350 FNGVNYECF 358 (369)
Q Consensus 350 f~~~~~~~~ 358 (369)
|+++++...
T Consensus 167 f~~~~~~~~ 175 (195)
T 3cgg_A 167 LELENAFES 175 (195)
T ss_dssp EEEEEEESS
T ss_pred CEEeeeecc
Confidence 999887554
No 66
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=1.3e-15 Score=135.14 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=107.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---CCCceEEeCCCCC-CCCC-------CCEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---YRGVKHIGGNMFE-RIPK-------GDAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p~-------~D~v~~~ 271 (369)
.....+|||||||+|.++..+++.++ +++++|. +.+++.+++ ..+++++.+|+.+ +.+. .|+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 34668999999999999999999988 7888888 777776643 3589999999988 3321 4899999
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhh-----hhHHHHHhh-cCCccCCHHHHHHHH
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASM-----TDIIMLMQF-SGGRERTTQEFMALA 345 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~-----~d~~~~~~~-~~~~~~t~~e~~~ll 345 (369)
.++|++++++...+|++++++|||||+++|.+...++.. ........ ..+...... .....++.+++.++|
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCID---FFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHH---HHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccH---HHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 999999988889999999999999999999998654311 00000000 000001000 011236899999999
Q ss_pred HHcCCcceeEEE
Q 017595 346 NEAGFNGVNYEC 357 (369)
Q Consensus 346 ~~aGf~~~~~~~ 357 (369)
+||++++.-.
T Consensus 209 --aGf~~~~~~~ 218 (245)
T 3ggd_A 209 --PDFEILSQGE 218 (245)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCCEEEeccc
Confidence 9999987644
No 67
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.62 E-value=4.4e-15 Score=129.51 Aligned_cols=137 Identities=20% Similarity=0.184 Sum_probs=102.0
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCC-C-CEEEeccccccCChhHH
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPK-G-DAILMKWILHNWDDEHC 282 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~-~-D~v~~~~vlh~~~d~~~ 282 (369)
..+|||||||+|.++..++.. +++|. +.+++.+++. ++.++.+|+.+ +++. . |+|++..++||+++ .
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~ 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDD--P 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSC--H
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccC--H
Confidence 679999999999999988765 88888 7777777655 89999999987 5554 3 99999999999954 4
Q ss_pred HHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 283 LTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 283 ~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
..+|++++++|+|||++++.+..... ... ....... ...........++.++|.++|+++||+++++...
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~----~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRES----FLG-REYEKNK-EKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSS----HHH-HHHHHTT-TC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCcc----HHH-HHHHHHh-cCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 68999999999999999998865321 111 0000000 0000011244579999999999999999988765
No 68
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.61 E-value=3.5e-15 Score=127.71 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=109.4
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCCCC-C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIPKG-D 266 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p~~-D 266 (369)
.+++.++ .....+|||||||+|.++..+++. +.+++++|. +.+++.+++. +++.++.+|+.+ +.+.. |
T Consensus 23 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 99 (199)
T 2xvm_A 23 EVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYD 99 (199)
T ss_dssp HHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEE
T ss_pred HHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCce
Confidence 3444444 445679999999999999999987 568999999 7777766542 479999999987 55444 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
+|++..++||+++++...+|++++++|+|||++++.+.......... ......++.+++.++|+
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~ 163 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRRYYE 163 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHHHTT
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHHHhc
Confidence 99999999999888889999999999999999999887654421100 01233468899999997
Q ss_pred HcCCcceeEEEe
Q 017595 347 EAGFNGVNYECF 358 (369)
Q Consensus 347 ~aGf~~~~~~~~ 358 (369)
+ |++++....
T Consensus 164 ~--f~~~~~~~~ 173 (199)
T 2xvm_A 164 G--WERVKYNED 173 (199)
T ss_dssp T--SEEEEEECC
T ss_pred C--CeEEEeccc
Confidence 6 998887543
No 69
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.61 E-value=2.7e-15 Score=134.28 Aligned_cols=146 Identities=12% Similarity=0.132 Sum_probs=103.2
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-----CCCceEEeCCCCC-CCCCC--CEEEecccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-----YRGVKHIGGNMFE-RIPKG--DAILMKWIL 274 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p~~--D~v~~~~vl 274 (369)
.....+|||||||+|.++..+++. ..+++++|. +.+++.+++ .+++.++.+|+.+ +++.+ |+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 468999998 777776543 3689999999987 55543 999999999
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhc---CCccCCHHHHHHHHHHcCCc
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFS---GGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~t~~e~~~ll~~aGf~ 351 (369)
|++++ ...+|++++++|+|||++++. ...++. ............+....... .....+.++|.++|+++||+
T Consensus 115 ~~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 115 HLVPD--WPKVLAEAIRVLKPGGALLEG-WDQAEA--SPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp GGCTT--HHHHHHHHHHHEEEEEEEEEE-EEEECC--CHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hhcCC--HHHHHHHHHHHCCCCcEEEEE-ecCCCc--cHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 99964 568999999999999999988 221110 11000011111111110000 11245789999999999999
Q ss_pred ceeEE
Q 017595 352 GVNYE 356 (369)
Q Consensus 352 ~~~~~ 356 (369)
++.+.
T Consensus 190 ~~~~~ 194 (263)
T 2yqz_A 190 PRTRE 194 (263)
T ss_dssp CEEEE
T ss_pred cceEE
Confidence 77653
No 70
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.61 E-value=3.8e-15 Score=129.44 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=102.1
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCCCC-CCCCC--CEEEec
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFE-RIPKG--DAILMK 271 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~~p~~--D~v~~~ 271 (369)
..+++.+.......+|||||||+|.++..+. .+++++|.... ++.++.+|+.+ +++.+ |+|++.
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEEe
Confidence 3455544424456899999999999998873 57888887322 67899999988 66543 999999
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
.++|+ ++...+|++++++|+|||++++.+.... ..+.++|.++++++||+
T Consensus 123 ~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~---------------------------~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 123 LSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSSR---------------------------FEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp SCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGGG---------------------------CSCHHHHHHHHHHTTEE
T ss_pred hhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCCC---------------------------CCCHHHHHHHHHHCCCE
Confidence 99984 4467899999999999999999875310 12689999999999999
Q ss_pred ceeEEEecCceeEEEEeC
Q 017595 352 GVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 352 ~~~~~~~~~~~~vi~~~~ 369 (369)
+++.........+++++|
T Consensus 173 ~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 173 IVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp EEEEECCSTTCEEEEEEE
T ss_pred EEEEecCCCeEEEEEEEe
Confidence 998776666667777654
No 71
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.59 E-value=2.6e-15 Score=132.89 Aligned_cols=162 Identities=10% Similarity=0.009 Sum_probs=110.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-CEEEecc-cccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG-DAILMKW-ILHN 276 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~-D~v~~~~-vlh~ 276 (369)
...+|||||||+|.++..+++. ..+++++|. +.+++.+++. .++.++.+|+.+ +.+.. |+|++.. ++||
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5679999999999999999988 457999999 8887766542 279999999987 55544 9999998 9999
Q ss_pred CC-hhHHHHHHHHHHHhCCCCCEEEEEeccCC-------CCCcchHHHh----hh-------hhhhHHHHHhh-------
Q 017595 277 WD-DEHCLTLLKNCYEAIPENGKIIIIDRMPM-------VTPEATAAAR----EA-------SMTDIIMLMQF------- 330 (369)
Q Consensus 277 ~~-d~~~~~~L~~~~~~L~pgG~lli~e~~~~-------~~~~~~~~~~----~~-------~~~d~~~~~~~------- 330 (369)
++ +++...+|++++++|+|||++++...... .......... +. ....+.++...
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRF 194 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCccccc
Confidence 94 46788999999999999999987433110 0000000000 00 00000000000
Q ss_pred ---cCCccCCHHHHHHHHHHcCCcceeEEEe--------cCceeEEEEeC
Q 017595 331 ---SGGRERTTQEFMALANEAGFNGVNYECF--------VCNFCIIEFIK 369 (369)
Q Consensus 331 ---~~~~~~t~~e~~~ll~~aGf~~~~~~~~--------~~~~~vi~~~~ 369 (369)
...+.++.++|.++|+++||+++++... .+...++.++|
T Consensus 195 ~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 195 DEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred EEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 0124469999999999999999998754 23455666664
No 72
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.59 E-value=6.1e-15 Score=130.37 Aligned_cols=94 Identities=21% Similarity=0.325 Sum_probs=79.4
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-CEEEecc-cccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG-DAILMKW-ILHN 276 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~-D~v~~~~-vlh~ 276 (369)
...+|||||||+|.++..+++. .+++++|. +.+++.+++. .+++++.+|+.+ +.+.. |+|++.. ++||
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNY 109 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGG
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhh
Confidence 4589999999999999999877 68999999 8887766542 579999999987 55544 9999986 9999
Q ss_pred C-ChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 277 W-DDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 277 ~-~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
+ +.++...+|++++++|+|||++++.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 8 5567889999999999999999873
No 73
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.59 E-value=7.3e-16 Score=140.63 Aligned_cols=145 Identities=15% Similarity=0.236 Sum_probs=104.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------------------------------------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------------------------------------ 248 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------------------------ 248 (369)
...+|||||||+|.++..+++.++..+++++|+ +.+++.+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 568999999999999999999999999999999 7777765432
Q ss_pred ----------------------------CCceEEeCCCCCCC------CC-C-CEEEeccccccC----ChhHHHHHHHH
Q 017595 249 ----------------------------RGVKHIGGNMFERI------PK-G-DAILMKWILHNW----DDEHCLTLLKN 288 (369)
Q Consensus 249 ----------------------------~rv~~~~~d~~~~~------p~-~-D~v~~~~vlh~~----~d~~~~~~L~~ 288 (369)
.+|+|+.+|+.... +. . |+|++..+++++ +++...++|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 47999999998632 22 3 999999999765 67788999999
Q ss_pred HHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHH--cCCcceeEEEe
Q 017595 289 CYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANE--AGFNGVNYECF 358 (369)
Q Consensus 289 ~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~--aGf~~~~~~~~ 358 (369)
++++|+|||+|++....... ............. .. .......+++.++|.+ +||+.++++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~------y~~~~~~~~~~~~-~~-~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSS------YGKRKTLTETIYK-NY-YRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHH------HHTTTTSCHHHHH-HH-HHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHhCCCcEEEEecCCchh------hhhhhcccHHHHh-hh-hcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999999875321110 0000000000000 01 1222347899999998 99998887654
No 74
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.58 E-value=1.1e-15 Score=133.53 Aligned_cols=153 Identities=18% Similarity=0.137 Sum_probs=108.7
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCC-----CC-C-CCE
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFER-----IP-K-GDA 267 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-----~p-~-~D~ 267 (369)
.+++.+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++.+..+|+.+. .+ . .|+
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccE
Confidence 4444444 345589999999999999999988 568999999 88888887778889999887651 12 2 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhh-----cCCccCCHHHHH
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQF-----SGGRERTTQEFM 342 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~t~~e~~ 342 (369)
|++.+++| + ++...+|++++++|+|||++++.+............ ..+......... .....++.++|.
T Consensus 120 v~~~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (227)
T 3e8s_A 120 ICANFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQ---DGWREESFAGFAGDWQPMPWYFRTLASWL 193 (227)
T ss_dssp EEEESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCS---CEEEEECCTTSSSCCCCEEEEECCHHHHH
T ss_pred EEECchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccc---cccchhhhhccccCcccceEEEecHHHHH
Confidence 99999999 5 345689999999999999999988765432211000 000000000000 011345999999
Q ss_pred HHHHHcCCcceeEEE
Q 017595 343 ALANEAGFNGVNYEC 357 (369)
Q Consensus 343 ~ll~~aGf~~~~~~~ 357 (369)
++|+++||+++++..
T Consensus 194 ~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 194 NALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCeEEEEec
Confidence 999999999999865
No 75
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.57 E-value=2.8e-15 Score=131.21 Aligned_cols=154 Identities=14% Similarity=0.131 Sum_probs=108.8
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC---CCCC-C-CEE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE---RIPK-G-DAI 268 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~~p~-~-D~v 268 (369)
..+++.++ ....+|||||||+|.++..+++. + .+++++|. +.+++.+++.. ..++.+|+.+ +++. . |+|
T Consensus 23 ~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 23 PNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp HHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEE
T ss_pred HHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEE
Confidence 45555554 45689999999999999999988 4 89999999 78877766442 4788999875 3343 3 999
Q ss_pred EeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHH----HhhcCCccCCHHHHHHH
Q 017595 269 LMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIML----MQFSGGRERTTQEFMAL 344 (369)
Q Consensus 269 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~t~~e~~~l 344 (369)
++..++||+++. ..+|+++++.|+|||++++..+..... ...... ....+... ......+.++.++|.++
T Consensus 98 ~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 98 IFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPL-LAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp EEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHH-HTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred EECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHH-hcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999654 589999999999999999987653221 000000 00000000 00001245699999999
Q ss_pred HHHcCCcceeEEEec
Q 017595 345 ANEAGFNGVNYECFV 359 (369)
Q Consensus 345 l~~aGf~~~~~~~~~ 359 (369)
++++||+++++....
T Consensus 172 l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 172 FLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHTTEEEEEEEEEE
T ss_pred HHHcCCeEEEEEecc
Confidence 999999999887654
No 76
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=1.3e-14 Score=129.63 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=85.4
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCCC--CEEEeccccccCChhH
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPKG--DAILMKWILHNWDDEH 281 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d~~ 281 (369)
...+|||||||+|.++..|++.+. +++++|+ +.+++.+++.+++.++.+|+.+ +++.+ |+|++..++|+++.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~-- 114 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDL-- 114 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCH--
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhH--
Confidence 457999999999999999998874 7899999 8999999999999999999988 77765 99999999998753
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 282 CLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 282 ~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
.+++++++++|||||+|++.....+
T Consensus 115 -~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 115 -DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp -HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred -HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 4789999999999999999887544
No 77
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.55 E-value=1.7e-14 Score=131.58 Aligned_cols=140 Identities=18% Similarity=0.135 Sum_probs=95.0
Q ss_pred CCcceEEEEcCChhHHHH----HHHHhCCCCeE--EEcch-hHHHHhCCCC-------CCceE--EeCCCCC-C------
Q 017595 205 EQIKQLVDVGGGLGVTLN----IITSRYPHIEG--VNFDL-PHVIQNAPSY-------RGVKH--IGGNMFE-R------ 261 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~----~l~~~~p~~~~--~~~D~-~~~~~~a~~~-------~rv~~--~~~d~~~-~------ 261 (369)
....+|||||||+|.++. .++.++|++++ +++|. +.+++.+++. +++.+ ..++..+ +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 345799999999997654 45566788854 99999 8887755431 34444 4555432 1
Q ss_pred CCC-C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhc---CCccC
Q 017595 262 IPK-G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFS---GGRER 336 (369)
Q Consensus 262 ~p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~ 336 (369)
++. . |+|++.++|||++| ..++|++++++|||||++++.+..... .+.. ... ....... ....+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~----~~~~----~~~-~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLIIVVSGSS----GWDK----LWK-KYGSRFPQDDLCQYI 199 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEECTTS----HHHH----HHH-HHGGGSCCCTTCCCC
T ss_pred cCCCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEEEEecCCc----cHHH----HHH-HHHHhccCCCcccCC
Confidence 233 3 99999999999965 468999999999999999998754211 1110 000 0000011 12457
Q ss_pred CHHHHHHHHHHcCCcceeE
Q 017595 337 TTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 337 t~~e~~~ll~~aGf~~~~~ 355 (369)
+.++|.++|+++||++++.
T Consensus 200 ~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 200 TSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCCceEEE
Confidence 8999999999999998764
No 78
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.53 E-value=2.5e-14 Score=127.34 Aligned_cols=133 Identities=9% Similarity=-0.062 Sum_probs=102.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-----------------------CCCceEEeCCCCC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-----------------------YRGVKHIGGNMFE 260 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------------------~~rv~~~~~d~~~ 260 (369)
....+|||+|||+|..+..|++. +.+++++|+ +.+++.+++ ..+++++.+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 458999999 877776531 2579999999998
Q ss_pred -CCC--CC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccC
Q 017595 261 -RIP--KG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRER 336 (369)
Q Consensus 261 -~~p--~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 336 (369)
+.+ .. |+|+...+||++++++...++++++++|||||+++++....+.... .......
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~------------------~g~~~~~ 206 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH------------------AGPPFYV 206 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC------------------CCSSCCC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC------------------CCCCCCC
Confidence 443 33 9999999999999888889999999999999999766554322100 0011125
Q ss_pred CHHHHHHHHHHcCCcceeEEEe
Q 017595 337 TTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 337 t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
+.+++.++|.+ +|+++.....
T Consensus 207 ~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 207 PSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp CHHHHHHHHTT-TEEEEEEEEE
T ss_pred CHHHHHHHhhC-CeEEEEEecc
Confidence 89999999987 6998776543
No 79
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.53 E-value=1.1e-13 Score=123.18 Aligned_cols=141 Identities=21% Similarity=0.276 Sum_probs=102.5
Q ss_pred CcceEEEEcCCh--hHHHHHHH-HhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCC---C--C---C-CC
Q 017595 206 QIKQLVDVGGGL--GVTLNIIT-SRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFER---I--P---K-GD 266 (369)
Q Consensus 206 ~~~~vLDvG~G~--G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~---~--p---~-~D 266 (369)
+..+|||||||+ +..+.+++ +..|+.+++++|. |.+++.++.. .+++++.+|+.++ + | . .|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 567999999997 44445554 4589999999999 9999988652 3699999999872 1 1 1 13
Q ss_pred -----EEEeccccccCChhH-HHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHH
Q 017595 267 -----AILMKWILHNWDDEH-CLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQE 340 (369)
Q Consensus 267 -----~v~~~~vlh~~~d~~-~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e 340 (369)
+|++..+|||+++++ ...+|++++++|+|||+|++.+.+.+..+ .. .....+...... .....||.+|
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p--~~---~~~~~~~~~~~g-~p~~~rs~~e 231 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP--QE---VGRVAREYAARN-MPMRLRTHAE 231 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH--HH---HHHHHHHHHHTT-CCCCCCCHHH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH--HH---HHHHHHHHHhcC-CCCccCCHHH
Confidence 689999999998876 67999999999999999999998765321 11 111112111111 1345689999
Q ss_pred HHHHHHHcCCccee
Q 017595 341 FMALANEAGFNGVN 354 (369)
Q Consensus 341 ~~~ll~~aGf~~~~ 354 (369)
+.++|. ||++++
T Consensus 232 i~~~f~--Glelve 243 (277)
T 3giw_A 232 AEEFFE--GLELVE 243 (277)
T ss_dssp HHHTTT--TSEECT
T ss_pred HHHHhC--CCcccC
Confidence 999994 999665
No 80
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.53 E-value=1.9e-15 Score=130.58 Aligned_cols=150 Identities=7% Similarity=-0.067 Sum_probs=105.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC--CEEEeccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG--DAILMKWILH 275 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~--D~v~~~~vlh 275 (369)
....+|||||||+|..+..++.. ++.+++++|. +.+++.+++. .++.++.+|+.+ +++.. |+|++..++|
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 35689999999999985555444 5679999999 8887766542 579999999988 66543 9999999999
Q ss_pred cCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeE
Q 017595 276 NWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 276 ~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 355 (369)
|++.++..++|++++++|+|||++++.+...++.............+.............++.+++.++|.++||...+.
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 99888889999999999999999999988765432110000000000000000000123568999999999999876654
No 81
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.5e-14 Score=129.83 Aligned_cols=138 Identities=18% Similarity=0.179 Sum_probs=100.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCC--------CCCceEEeCCCCC-CCCC------C--
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPS--------YRGVKHIGGNMFE-RIPK------G-- 265 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--------~~rv~~~~~d~~~-~~p~------~-- 265 (369)
....+|||||||+|.++..+++.+ +..+++++|+ +.+++.+++ .++++++.+|+.+ +++. +
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8899999999 888877653 4689999999988 5443 3
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc---CCCCCcchHHHhhhhhhhHHHHHh-hcCCcc--CCHH
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM---PMVTPEATAAAREASMTDIIMLMQ-FSGGRE--RTTQ 339 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~---~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~--~t~~ 339 (369)
|+|++..++||+ +...+|+++++.|+|||+|++.+.. ....+.. ...+.-..... ..+... ...+
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~w~~p~~~ 185 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEF------DDLMIEVPYGKQGLGPYWEQPGRS 185 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGG------TTHHHHHHHCTTTTGGGSCTTHHH
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHH------HHHHHHhccCcccccchhhchhhH
Confidence 999999999999 4568999999999999999995443 2221111 11111111000 001111 4566
Q ss_pred HHHHHHHHcCCc
Q 017595 340 EFMALANEAGFN 351 (369)
Q Consensus 340 e~~~ll~~aGf~ 351 (369)
.+.++++++||.
T Consensus 186 ~~~~~l~~~gfp 197 (299)
T 3g5t_A 186 RLRNMLKDSHLD 197 (299)
T ss_dssp HHHTTTTTCCCC
T ss_pred HHHHhhhccCCC
Confidence 779999999994
No 82
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.50 E-value=3.1e-13 Score=113.01 Aligned_cols=118 Identities=17% Similarity=0.237 Sum_probs=96.9
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCCCCC--CCEEEeccccccCChh--
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFERIPK--GDAILMKWILHNWDDE-- 280 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~--~D~v~~~~vlh~~~d~-- 280 (369)
...+|||+|||+|.++..++++. +++++|+ +.+++. .++++++.+|+.++++. .|+|+++..+|+.++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTT
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCcccc
Confidence 35699999999999999999887 8999999 777777 56899999999986553 3999999998865544
Q ss_pred -----HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeE
Q 017595 281 -----HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 281 -----~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 355 (369)
+...+++++.+.| |||++++.+... .+.+++.++++++||+.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------------------~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 97 IGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------------------NRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------------------GCHHHHHHHHHHTTCEEEEE
T ss_pred ccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------------------CCHHHHHHHHHHCCCcEEEE
Confidence 4567899999999 999999877421 13567889999999999888
Q ss_pred EEec
Q 017595 356 ECFV 359 (369)
Q Consensus 356 ~~~~ 359 (369)
....
T Consensus 147 ~~~~ 150 (170)
T 3q87_B 147 KVRK 150 (170)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 7665
No 83
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.50 E-value=1.2e-13 Score=125.76 Aligned_cols=149 Identities=15% Similarity=0.066 Sum_probs=106.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CC-CC-C-CEEEecc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RI-PK-G-DAILMKW 272 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~-p~-~-D~v~~~~ 272 (369)
....+|||||||+|.++..+++. +..+++++|+ +.+++.+++. .++.++.+|+.+ ++ +. . |+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45689999999999999998776 4568999999 7777766542 468999999988 55 33 3 9999999
Q ss_pred cccc--CChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhh--------------------h----hhhhHHH
Q 017595 273 ILHN--WDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAARE--------------------A----SMTDIIM 326 (369)
Q Consensus 273 vlh~--~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~--------------------~----~~~d~~~ 326 (369)
++|+ .+.++...+|++++++|+|||++++..+.... ..... . ....+..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 216 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV-----ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTL 216 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH-----HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH-----HHHHHccCccCCeeEEEEeCccccccccccceEEEEE
Confidence 9998 56677889999999999999999998754210 00000 0 0000000
Q ss_pred HHh--hcCCccCCHHHHHHHHHHcCCcceeEEEec
Q 017595 327 LMQ--FSGGRERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 327 ~~~--~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
... ......++.++|.++++++||+++++....
T Consensus 217 ~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 217 LDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp TTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred chhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 000 001234689999999999999999887653
No 84
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.50 E-value=2.7e-14 Score=130.00 Aligned_cols=98 Identities=18% Similarity=0.211 Sum_probs=82.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCC-C---CCC-C-CE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFE-R---IPK-G-DA 267 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~-~---~p~-~-D~ 267 (369)
.+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..++.+..+|+.+ + ++. . |+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 456899999999999999999984 48999998 777776643 1578899999887 5 444 3 99
Q ss_pred EEec-cccccCCh-----hHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 268 ILMK-WILHNWDD-----EHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 268 v~~~-~vlh~~~d-----~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
|++. +++||+++ ++..++|++++++|||||++++..+
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998 99999987 7788999999999999999998764
No 85
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.49 E-value=2.7e-14 Score=127.91 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=103.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----C------------------------------
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----R------------------------------ 249 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~------------------------------ 249 (369)
....+|||||||+|.++..++...+ .+++++|. +.+++.+++. +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4568999999999999999888766 57899998 7777765321 1
Q ss_pred -Cc-eEEeCCCCC--CCCC----C-CEEEeccccccCCh--hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhh
Q 017595 250 -GV-KHIGGNMFE--RIPK----G-DAILMKWILHNWDD--EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAARE 318 (369)
Q Consensus 250 -rv-~~~~~d~~~--~~p~----~-D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~ 318 (369)
++ .++.+|+.+ +.+. . |+|++..+||++++ ++...+|++++++|+|||++++.+.......
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~-------- 205 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY-------- 205 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE--------
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE--------
Confidence 17 899999987 2233 3 99999999995433 4678999999999999999999986432100
Q ss_pred hhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEec
Q 017595 319 ASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 319 ~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
... ...+ .....+.++|.++|+++||+++++....
T Consensus 206 -~~~----~~~~-~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 -MIG----EQKF-SSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp -EET----TEEE-ECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred -EcC----Cccc-cccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 000 0000 1234588999999999999999887654
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.49 E-value=8.9e-14 Score=126.24 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=106.5
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-CE
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG-DA 267 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~-D~ 267 (369)
.+++.++ .....+|||||||+|.++..+++. +.+++++|. +.+++.+++. .+++++.+|+.+ +.+.. |+
T Consensus 111 ~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 187 (286)
T 3m70_A 111 DVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDF 187 (286)
T ss_dssp HHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEE
T ss_pred HHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccE
Confidence 3333343 335789999999999999999988 458999998 7777766542 289999999988 44444 99
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHH
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANE 347 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~ 347 (369)
|++..++||++++....+|+++++.|+|||++++............ ......++.+++.++++
T Consensus 188 i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~- 250 (286)
T 3m70_A 188 IVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKEYYK- 250 (286)
T ss_dssp EEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHHHTT-
T ss_pred EEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHHHhc-
Confidence 9999999999998899999999999999999888777654321110 01233467888999985
Q ss_pred cCCcceeEE
Q 017595 348 AGFNGVNYE 356 (369)
Q Consensus 348 aGf~~~~~~ 356 (369)
+|++++..
T Consensus 251 -~~~~~~~~ 258 (286)
T 3m70_A 251 -DWEFLEYN 258 (286)
T ss_dssp -TSEEEEEE
T ss_pred -CCEEEEEE
Confidence 48887764
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=8.8e-13 Score=117.23 Aligned_cols=107 Identities=21% Similarity=0.322 Sum_probs=84.9
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG- 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~- 265 (369)
+..++.... ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. .++.++.+|+.+ +.+..
T Consensus 30 ~~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 30 VEEIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 344455443 345689999999999999999987 568999999 8887766542 379999999987 55544
Q ss_pred CEEEec-cccccCChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 266 DAILMK-WILHNWDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 266 D~v~~~-~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
|+|++. ..+++++.++..++|++++++|+|||++++.-
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999886 56677777888999999999999999988643
No 88
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.48 E-value=6.6e-14 Score=134.06 Aligned_cols=151 Identities=14% Similarity=0.113 Sum_probs=107.9
Q ss_pred hHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC------CCC-C
Q 017595 193 VMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE------RIP-K 264 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~------~~p-~ 264 (369)
....+++.+. .....+|||||||+|.++..++++. .+++++|+ +.+++.+++. ++......+.. +++ .
T Consensus 95 ~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 95 LARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCC
Confidence 3456666665 6677899999999999999999874 48999999 8888877755 44444332221 122 2
Q ss_pred -CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 265 -GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 265 -~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
.|+|++.++|||++ +...+|++++++|||||++++..+.... .. .. ..++ .. .......++.++|.+
T Consensus 171 ~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~-~~-~~~~--~~-~~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 171 PANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGD-----IV-AK-TSFD--QI-FDEHFFLFSATSVQG 238 (416)
T ss_dssp CEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHH-----HH-HH-TCGG--GC-STTCCEECCHHHHHH
T ss_pred CEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHH-----hh-hh-cchh--hh-hhhhhhcCCHHHHHH
Confidence 39999999999995 4679999999999999999987653211 00 00 0000 00 012445679999999
Q ss_pred HHHHcCCcceeEEEec
Q 017595 344 LANEAGFNGVNYECFV 359 (369)
Q Consensus 344 ll~~aGf~~~~~~~~~ 359 (369)
+++++||+++++...+
T Consensus 239 ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 239 MAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHcCCEEEEEEEcc
Confidence 9999999999987765
No 89
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.48 E-value=1.3e-14 Score=130.26 Aligned_cols=139 Identities=13% Similarity=0.083 Sum_probs=97.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----------------------------------
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----------------------------------- 248 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------------------------- 248 (369)
....+|||||||+|.++..++...- .+++++|+ +.+++.+++.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 3568999999999987666554432 26899999 7777754321
Q ss_pred CCce-EEeCCCCCC--CC-----CCCEEEeccccccC-C-hhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhh
Q 017595 249 RGVK-HIGGNMFER--IP-----KGDAILMKWILHNW-D-DEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAARE 318 (369)
Q Consensus 249 ~rv~-~~~~d~~~~--~p-----~~D~v~~~~vlh~~-~-d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~ 318 (369)
.++. ++.+|+.+. ++ ..|+|++..+|||. + .++..++|++++++|||||+|++.+.......
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~-------- 204 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY-------- 204 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE--------
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc--------
Confidence 1233 889999873 22 23999999999985 2 35677899999999999999999876432110
Q ss_pred hhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 319 ASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 319 ~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
.... ..+ ....++.++|.++|+++||+++++...
T Consensus 205 -~~g~----~~~-~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 205 -MVGK----REF-SCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp -EETT----EEE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred -eeCC----eEe-eccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0000 000 122458999999999999999988654
No 90
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.48 E-value=1.7e-14 Score=125.36 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=82.9
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCCCCCC-C-CEEEecccccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFERIPK-G-DAILMKWILHN 276 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~~~p~-~-D~v~~~~vlh~ 276 (369)
.....+|||||||+|.++..+++.+ .+++++|. +.+++.+++ .++++++.+|+.+..+. . |+|++..++||
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 4567899999999999999999886 47888998 777765543 36899999999883333 3 99999999999
Q ss_pred CCh-hHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 277 WDD-EHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 277 ~~d-~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+++ +...++|++++++|+|||++++....
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 986 45568999999999999999987753
No 91
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.47 E-value=8.9e-14 Score=119.83 Aligned_cols=130 Identities=13% Similarity=0.061 Sum_probs=104.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCCCC-CEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIPKG-DAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p~~-D~v~~~~vlh~ 276 (369)
....+|||||||+|.++..+++ .+..+++++|. +.+++.+++. .+++++.+|+.+..+.. |+|++..++|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI 137 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH
Confidence 3568999999999999999776 56779999999 8777766542 34999999998854444 99999888765
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEE
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYE 356 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 356 (369)
+ ..+++++++.|+|||++++.+.... +.+++.++++++||+.+++.
T Consensus 138 ~-----~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 138 L-----LDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp H-----HHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTEEEEEEE
T ss_pred H-----HHHHHHHHHhcCCCCEEEEEecCcc-----------------------------cHHHHHHHHHHcCCceEEee
Confidence 3 6889999999999999999765321 25678899999999999998
Q ss_pred EecCceeEEEEeC
Q 017595 357 CFVCNFCIIEFIK 369 (369)
Q Consensus 357 ~~~~~~~vi~~~~ 369 (369)
......+++.-.|
T Consensus 184 ~~~~w~~~~~~~~ 196 (205)
T 3grz_A 184 RAGRWIGLAISRK 196 (205)
T ss_dssp EETTEEEEEEEEC
T ss_pred ccCCEEEEEEecc
Confidence 8888888776543
No 92
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.47 E-value=5.5e-13 Score=117.13 Aligned_cols=141 Identities=13% Similarity=0.088 Sum_probs=99.8
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHh----CCCCCCceEEeCCCCC-----CCCCC-CEEEecc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQN----APSYRGVKHIGGNMFE-----RIPKG-DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~----a~~~~rv~~~~~d~~~-----~~p~~-D~v~~~~ 272 (369)
+.+..+|||||||+|.++..+++.++..+++++|. +.+++. ++..+++.++.+|+.+ +++.. |+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 55678999999999999999999988889999999 766643 3445789999999976 22333 9988
Q ss_pred ccccCChh-HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 273 ILHNWDDE-HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 273 vlh~~~d~-~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
|++++. ....+|+++++.|+|||++++. ............ .. ...+++. +|+++||+
T Consensus 149 --~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~---------~~---------~~~~~l~-~l~~~Gf~ 206 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDP---------KE---------IFKEQKE-ILEAGGFK 206 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCH---------HH---------HHHHHHH-HHHHHTEE
T ss_pred --EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCH---------HH---------hhHHHHH-HHHHCCCE
Confidence 555433 3467799999999999999997 211110000000 00 0136777 89999999
Q ss_pred ceeEEEecCc---eeEEEEeC
Q 017595 352 GVNYECFVCN---FCIIEFIK 369 (369)
Q Consensus 352 ~~~~~~~~~~---~~vi~~~~ 369 (369)
.+++...... +.++.++|
T Consensus 207 ~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 207 IVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp EEEEEECTTTSTTEEEEEEEE
T ss_pred EEEEEccCCCccceEEEEEEe
Confidence 9998877644 66665543
No 93
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=6.3e-13 Score=120.07 Aligned_cols=144 Identities=15% Similarity=0.135 Sum_probs=109.0
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCCC-C
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIPK-G 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p~-~ 265 (369)
++.+++.++ ....+|||||||+|.++..++..+|+.+++++|. +.+++.+++. ++++++.+|++++++. .
T Consensus 99 ~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 176 (276)
T 2b3t_A 99 VEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQ 176 (276)
T ss_dssp HHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCC
T ss_pred HHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCC
Confidence 344555443 3457999999999999999999999999999999 8877766542 5799999999886533 3
Q ss_pred -CEEEec-------------cccccCCh----------hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhh
Q 017595 266 -DAILMK-------------WILHNWDD----------EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASM 321 (369)
Q Consensus 266 -D~v~~~-------------~vlh~~~d----------~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~ 321 (369)
|+|++. .+++|.|. +....+++++.+.|+|||++++....
T Consensus 177 fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------- 240 (276)
T 2b3t_A 177 FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---------------- 240 (276)
T ss_dssp EEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS----------------
T ss_pred ccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc----------------
Confidence 999998 34444432 34578999999999999999875210
Q ss_pred hhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEe-cCceeEEEEeC
Q 017595 322 TDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECF-VCNFCIIEFIK 369 (369)
Q Consensus 322 ~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vi~~~~ 369 (369)
.+.+++.++++++||+.+++... .+...++.++|
T Consensus 241 --------------~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 241 --------------QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp --------------SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred --------------hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 13667899999999998888764 45566666654
No 94
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.47 E-value=2.1e-13 Score=117.10 Aligned_cols=131 Identities=11% Similarity=0.073 Sum_probs=99.9
Q ss_pred eEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCC--CCEEEeccccccCCh
Q 017595 209 QLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPK--GDAILMKWILHNWDD 279 (369)
Q Consensus 209 ~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~--~D~v~~~~vlh~~~d 279 (369)
+|||||||+|.++..+++. +.+++++|. +.+++.+++. .++.++.+|+.+ +++. .|+|++. +.|++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCH
Confidence 9999999999999999887 468999999 7787776543 379999999988 5553 3999984 345677
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 280 EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 280 ~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
++...+|++++++|+|||++++......... ..... .......++.+++.++|+ ||+++++...
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-------~~~~~------~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ-------YNTGG------PKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEEECTTTGG-------GTSCC------SSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccccc-------CCCCC------CCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 7889999999999999999999887643310 00000 000123579999999998 9999887654
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.46 E-value=2e-13 Score=118.07 Aligned_cols=141 Identities=15% Similarity=0.099 Sum_probs=100.3
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCC-eEEEcch-hHHHHhCCCC-CCceEEeCCCCC-CCCCC--CEEE
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHI-EGVNFDL-PHVIQNAPSY-RGVKHIGGNMFE-RIPKG--DAIL 269 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~rv~~~~~d~~~-~~p~~--D~v~ 269 (369)
.++..+. ....+|||||||+|.++..+ +. +++++|. +.+++.+++. +++.++.+|+.+ +++.+ |+|+
T Consensus 28 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 28 RALKGLL--PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVL 100 (211)
T ss_dssp HHHHTTC--CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEE
T ss_pred HHHHHhc--CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEE
Confidence 3444443 25689999999999999887 45 8999999 7777776543 689999999987 66543 9999
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHH--hhcCCccCCHHHHHHHHHH
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLM--QFSGGRERTTQEFMALANE 347 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~t~~e~~~ll~~ 347 (369)
+.+++||+++ ..++|++++++|||||++++.++.... .+.. .... ..... .....+.+|.+++.++|+
T Consensus 101 ~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~----~~~~-~~~~--~~~~~~~~~~~~~~~s~~~l~~~l~- 170 (211)
T 2gs9_A 101 LFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEALS----PWAA-LYRR--LGEKGVLPWAQARFLAREDLKALLG- 170 (211)
T ss_dssp EESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTTS----HHHH-HHHH--HHHTTCTTGGGCCCCCHHHHHHHHC-
T ss_pred EcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCcC----cHHH-HHHH--HhhccCccccccccCCHHHHHHHhc-
Confidence 9999999964 568999999999999999998875432 1110 0000 00000 011245579999999998
Q ss_pred cCCcceeEE
Q 017595 348 AGFNGVNYE 356 (369)
Q Consensus 348 aGf~~~~~~ 356 (369)
| ++++.
T Consensus 171 -G--~~~~~ 176 (211)
T 2gs9_A 171 -P--PEAEG 176 (211)
T ss_dssp -S--CSEEE
T ss_pred -C--cceeE
Confidence 8 44443
No 96
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.45 E-value=7.8e-13 Score=113.83 Aligned_cols=124 Identities=12% Similarity=0.115 Sum_probs=98.2
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCC---CC
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIP---KG 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p---~~ 265 (369)
.++..++ .....+|||||||+|.++..+++.+|..+++++|. +.+++.+++. ++++++.+|+.+..+ ..
T Consensus 31 ~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 31 VTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 4455555 66778999999999999999999999999999999 8888776542 689999999977433 34
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
|+|++...++ +...+++++.+.|+|||++++...... +.+++.+++
T Consensus 110 D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------------------------~~~~~~~~l 155 (204)
T 3e05_A 110 DRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTLD-----------------------------TLTKAVEFL 155 (204)
T ss_dssp SEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBHH-----------------------------HHHHHHHHH
T ss_pred CEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEecccc-----------------------------cHHHHHHHH
Confidence 9999998876 345899999999999999998654310 255678889
Q ss_pred HHcCCcceeE
Q 017595 346 NEAGFNGVNY 355 (369)
Q Consensus 346 ~~aGf~~~~~ 355 (369)
+++|| .+++
T Consensus 156 ~~~g~-~~~~ 164 (204)
T 3e05_A 156 EDHGY-MVEV 164 (204)
T ss_dssp HHTTC-EEEE
T ss_pred HHCCC-ceeE
Confidence 99998 4433
No 97
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.44 E-value=4.6e-14 Score=128.37 Aligned_cols=139 Identities=11% Similarity=0.116 Sum_probs=97.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--------------------C---------------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--------------------R--------------- 249 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------------~--------------- 249 (369)
...+|||||||+|.+ ..++...+..+++++|+ +.+++.+++. .
T Consensus 71 ~~~~vLDiGcG~G~~-~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVY-QLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCG-GGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChH-HHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 457999999999994 34444445569999999 8777654331 0
Q ss_pred -CceEEeCCCCC--C-----CCC--CCEEEeccccccCCh--hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHh
Q 017595 250 -GVKHIGGNMFE--R-----IPK--GDAILMKWILHNWDD--EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAR 317 (369)
Q Consensus 250 -rv~~~~~d~~~--~-----~p~--~D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~ 317 (369)
.+.++.+|+.+ + ++. .|+|++..+||++++ ++..++|++++++|||||+|++.+.......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~------- 222 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWY------- 222 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEE-------
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceE-------
Confidence 14566778876 2 222 399999999999543 3678999999999999999999865422100
Q ss_pred hhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEec
Q 017595 318 EASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 318 ~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
...+ .......++.++|.++|+++||+++++....
T Consensus 223 --~~~~-----~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 223 --LAGE-----ARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp --EETT-----EEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --EcCC-----eeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 0000 0001234689999999999999998876543
No 98
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.44 E-value=1.5e-13 Score=119.61 Aligned_cols=143 Identities=11% Similarity=0.080 Sum_probs=95.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHh----CCC------CCCceEEeCCCCC-CCCCC-CEEEe
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQN----APS------YRGVKHIGGNMFE-RIPKG-DAILM 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~----a~~------~~rv~~~~~d~~~-~~p~~-D~v~~ 270 (369)
.....+|||||||+|.++..+++.+|+.+++++|+ +.+++. +++ .++++++.+|+.+ +++.. |.|++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 44678999999999999999999999999999999 765443 222 3589999999988 55533 66552
Q ss_pred c---ccc--ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 271 K---WIL--HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 271 ~---~vl--h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
. ..+ ||+++. ..+|++++++|||||++++.-.......... .... ...-......+++..++
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~l~~~l 171 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCRPGASFLVALNLHAWRPSVP---EVGE--------HPEPTPDSADEWLAPRY 171 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG---GGTT--------CCCCCHHHHHHHHHHHH
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcCCCcEEEEEecccccccccc---cccc--------CCccchHHHHHHHHHHH
Confidence 2 222 244332 5899999999999999998433211110000 0000 00001111245588899
Q ss_pred HHcCCcceeEEEec
Q 017595 346 NEAGFNGVNYECFV 359 (369)
Q Consensus 346 ~~aGf~~~~~~~~~ 359 (369)
+++||++.++....
T Consensus 172 ~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 172 AEAGWKLADCRYLE 185 (218)
T ss_dssp HHTTEEEEEEEEEC
T ss_pred HHcCCCceeeeccc
Confidence 99999998886653
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.43 E-value=7.2e-13 Score=112.47 Aligned_cols=141 Identities=13% Similarity=0.242 Sum_probs=108.3
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C--CceEEeCCCCCCCCC-
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R--GVKHIGGNMFERIPK- 264 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--rv~~~~~d~~~~~p~- 264 (369)
+.+++.+. .....+|||+|||+|.++..+++. ..+++++|. +.+++.+++. + +++++.+|+.+..+.
T Consensus 42 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 42 KILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 34555555 556789999999999999999988 678999998 7777765532 3 499999999885543
Q ss_pred C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 265 G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 265 ~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
. |+|++..++|+ ..+....+++++++.|+|||++++....... ..++.+
T Consensus 119 ~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-----------------------------~~~~~~ 168 (194)
T 1dus_A 119 KYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG-----------------------------AKSLAK 168 (194)
T ss_dssp CEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH-----------------------------HHHHHH
T ss_pred CceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCCC-----------------------------hHHHHH
Confidence 3 99999988875 3466789999999999999999998764210 224666
Q ss_pred HHHHcCCcceeEEEecCceeEEEEeC
Q 017595 344 LANEAGFNGVNYECFVCNFCIIEFIK 369 (369)
Q Consensus 344 ll~~aGf~~~~~~~~~~~~~vi~~~~ 369 (369)
.+++. |..+++.....+..++.+.|
T Consensus 169 ~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 169 YMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHHH-hcceEEEecCCcEEEEEEee
Confidence 77776 77788888778888887765
No 100
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=3.3e-14 Score=125.51 Aligned_cols=133 Identities=15% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC---CCCCC--CEEE----
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE---RIPKG--DAIL---- 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~---~~p~~--D~v~---- 269 (369)
....+|||||||+|..+..+++..|. +++++|+ |.+++.+++. .++.++.+|... +++.. |.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 35689999999999999999887774 7899999 8888877642 568888888754 34442 7765
Q ss_pred -eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHc
Q 017595 270 -MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEA 348 (369)
Q Consensus 270 -~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~a 348 (369)
....++|+ .+...++++++|+|||||+|++.+..... .......+ .......+.+...|.++
T Consensus 138 ~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~~~~~~~-------~~~~~~~~--------~~~~~~~~~~~~~L~ea 200 (236)
T 3orh_A 138 PLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYCNLTSWG-------ELMKSKYS--------DITIMFEETQVPALLEA 200 (236)
T ss_dssp CCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEECCHHHHH-------HHTTTTCS--------CHHHHHHHHTHHHHHHH
T ss_pred ecccchhhh--cchhhhhhhhhheeCCCCEEEEEecCCch-------hhhhhhhh--------hhhhhhHHHHHHHHHHc
Confidence 45666777 56678999999999999999876532110 00000000 00011245677788899
Q ss_pred CCcceeE
Q 017595 349 GFNGVNY 355 (369)
Q Consensus 349 Gf~~~~~ 355 (369)
||+++.+
T Consensus 201 GF~~~~i 207 (236)
T 3orh_A 201 GFRRENI 207 (236)
T ss_dssp TCCGGGE
T ss_pred CCeEEEE
Confidence 9997655
No 101
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=8.5e-14 Score=120.40 Aligned_cols=145 Identities=12% Similarity=0.016 Sum_probs=92.7
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCCCC-----
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFERIP----- 263 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~~p----- 263 (369)
+.+++.++......+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++. .+++++.+|+.++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 98 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAER 98 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhc
Confidence 34455454225678999999999999999999999999999999 8888877754 168888888877433
Q ss_pred -C-CCEEEeccccc------cCChhHH------------------HHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHh
Q 017595 264 -K-GDAILMKWILH------NWDDEHC------------------LTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAR 317 (369)
Q Consensus 264 -~-~D~v~~~~vlh------~~~d~~~------------------~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~ 317 (369)
. .|+|++...++ +++++.. ..++++++++|+|||++++++...
T Consensus 99 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------- 167 (215)
T 4dzr_A 99 GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH----------- 167 (215)
T ss_dssp TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-----------
T ss_pred cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-----------
Confidence 2 39999964443 3322222 688999999999999966665421
Q ss_pred hhhhhhHHHHHhhcCCccCCHHHHHHHHH--HcCCcceeEEEec-CceeEEEEe
Q 017595 318 EASMTDIIMLMQFSGGRERTTQEFMALAN--EAGFNGVNYECFV-CNFCIIEFI 368 (369)
Q Consensus 318 ~~~~~d~~~~~~~~~~~~~t~~e~~~ll~--~aGf~~~~~~~~~-~~~~vi~~~ 368 (369)
...+++.++++ ++||..+++.... +...++.++
T Consensus 168 ------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 168 ------------------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp ------------------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred ------------------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 12456777888 8999988887765 333444443
No 102
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.42 E-value=4.1e-13 Score=125.27 Aligned_cols=113 Identities=12% Similarity=0.170 Sum_probs=90.9
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---------------CCCceEEeCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---------------YRGVKHIGGN 257 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------~~rv~~~~~d 257 (369)
+..+++.+. +....+|||||||+|.++..++...+..+++++|+ +.+++.|+. .++|+++.+|
T Consensus 162 i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 162 VAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 445666665 67789999999999999999998887667999999 666554432 2689999999
Q ss_pred CCC-CCC----CCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCC
Q 017595 258 MFE-RIP----KGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTP 310 (369)
Q Consensus 258 ~~~-~~p----~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~ 310 (369)
+++ +++ ..|+|+++.+++ + ++..+.|+++++.|||||+|++.|.+.+.+.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 998 553 359999887763 3 5667888999999999999999999887754
No 103
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.42 E-value=7.8e-13 Score=115.73 Aligned_cols=145 Identities=10% Similarity=0.065 Sum_probs=91.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchh-HH-HHhC---CC------CCCceEEeCCCCCCCCC--CCEEEec
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLP-HV-IQNA---PS------YRGVKHIGGNMFERIPK--GDAILMK 271 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~-~~~a---~~------~~rv~~~~~d~~~~~p~--~D~v~~~ 271 (369)
....+|||||||+|.++..++++.|+.+++++|+. .. ++.+ ++ .+++.++.+|+.+- |. .|+|.+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhccCeEEEE
Confidence 35679999999999999999999999999999983 44 3333 43 25799999998762 32 2666555
Q ss_pred cccccCChh------HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 272 WILHNWDDE------HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 272 ~vlh~~~d~------~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
.+.+.|+.. ....+|++++++|||||++++......... .... ....... . .......+++.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~-~~~~----~~~~~~~---~-~~~~~~~~el~~~l 172 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYE-EAEI----KKRGLPL---L-SKAYFLSEQYKAEL 172 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC----------------------C-CHHHHHSHHHHHHH
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccch-hchh----hhcCCCC---C-ChhhcchHHHHHHH
Confidence 554444321 113689999999999999999544332210 0000 0000000 0 00001123599999
Q ss_pred HHcCCcceeEEEec
Q 017595 346 NEAGFNGVNYECFV 359 (369)
Q Consensus 346 ~~aGf~~~~~~~~~ 359 (369)
+++||++.++....
T Consensus 173 ~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 173 SNSGFRIDDVKELD 186 (225)
T ss_dssp HHHTCEEEEEEEEC
T ss_pred HHcCCCeeeeeecC
Confidence 99999988876654
No 104
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=1.3e-12 Score=109.59 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=81.7
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CC-CceEEeCCCCCCCC---C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YR-GVKHIGGNMFERIP---K 264 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-rv~~~~~d~~~~~p---~ 264 (369)
.+++.+. .....+|||||||+|.++..+++.+|..+++++|. +.+++.+++ .+ ++ ++.+|..+.++ .
T Consensus 16 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 16 LAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 3444454 55678999999999999999999999999999999 777776653 23 78 88899876443 2
Q ss_pred -CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 -GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 -~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.|+|++..++|+ ..+++++++.|+|||++++....
T Consensus 94 ~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 94 NPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred CCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 399999999987 47899999999999999987753
No 105
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.35 E-value=7.4e-12 Score=109.18 Aligned_cols=140 Identities=11% Similarity=0.144 Sum_probs=98.3
Q ss_pred cCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHh----CCCCCCceEEeCCCCCC--CC---CC-CEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQN----APSYRGVKHIGGNMFER--IP---KG-DAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~----a~~~~rv~~~~~d~~~~--~p---~~-D~v~~~ 271 (369)
++...+|||+|||+|.++..+++. .|+-+++++|. +.+++. +++.+++..+.+|...+ .+ .. |+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 678899999999999999999998 58899999999 777654 44557899999998762 12 22 877753
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
+++. ++...+++++++.|||||+++|.......+. .. ..+ ...++-.+.|+++||+
T Consensus 155 --~~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~----~~---------------p~~-~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 155 --VAQP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDV----TT---------------EPS-EVYKREIKTLMDGGLE 210 (233)
T ss_dssp --CCCT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHH----HT---------------CCC-HHHHHHHHHHHHTTCC
T ss_pred --ccCC--hhHHHHHHHHHHhccCCCEEEEEEecccCCC----CC---------------ChH-HHHHHHHHHHHHCCCE
Confidence 3333 4567899999999999999998754321110 00 000 0122345667899999
Q ss_pred ceeEEEecC---ceeEEEE
Q 017595 352 GVNYECFVC---NFCIIEF 367 (369)
Q Consensus 352 ~~~~~~~~~---~~~vi~~ 367 (369)
+++...+.+ .+.++.+
T Consensus 211 l~e~i~L~pf~~~H~lv~~ 229 (233)
T 4df3_A 211 IKDVVHLDPFDRDHAMIYA 229 (233)
T ss_dssp EEEEEECTTTSTTEEEEEE
T ss_pred EEEEEccCCCCCceEEEEE
Confidence 999887753 3555443
No 106
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=2.9e-13 Score=119.29 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=77.0
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC---CCCCC--CEEEe-cc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE---RIPKG--DAILM-KW 272 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~---~~p~~--D~v~~-~~ 272 (369)
....+|||||||+|.++..+++..+ .+++++|. +.+++.+++. .+++++.+|+.+ +++.+ |+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3567999999999999999976544 38899999 8887766542 579999999865 35543 99998 55
Q ss_pred c--cccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 273 I--LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 273 v--lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
. .+++..+....++++++++|||||++++.+..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4 33443455668899999999999999987754
No 107
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=8.5e-13 Score=118.48 Aligned_cols=96 Identities=15% Similarity=0.165 Sum_probs=80.2
Q ss_pred CcceEEEEcCChhH----HHHHHHHhCC----CCeEEEcch-hHHHHhCCCC----------------------------
Q 017595 206 QIKQLVDVGGGLGV----TLNIITSRYP----HIEGVNFDL-PHVIQNAPSY---------------------------- 248 (369)
Q Consensus 206 ~~~~vLDvG~G~G~----~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~---------------------------- 248 (369)
+..+|+|+|||+|. +++.+++..| +.++++.|+ +.+++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5666777655 468999999 8888766431
Q ss_pred ---------CCceEEeCCCCC-CCC--CC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEE
Q 017595 249 ---------RGVKHIGGNMFE-RIP--KG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIII 301 (369)
Q Consensus 249 ---------~rv~~~~~d~~~-~~p--~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli 301 (369)
.+|.|..+|+.+ +++ .. |+|+|+++|++++++...+++++++++|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 268999999998 565 33 999999999999988889999999999999999987
No 108
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.34 E-value=1.9e-12 Score=115.25 Aligned_cols=108 Identities=8% Similarity=0.084 Sum_probs=81.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-C------CCC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-R------IPK- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~------~p~- 264 (369)
...+++.++ .....+|||||||+|.++..++++. .+++++|. +.+++.+++.-.-.++..++.+ + .+.
T Consensus 34 ~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 34 RENDIFLEN-IVPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCC
Confidence 445666565 6677899999999999999999874 58999998 8888776543110022233322 1 122
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.|+|++..++||++.++...++++++++| |||++++....
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 39999999999999888999999999999 99999987543
No 109
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=1.3e-11 Score=106.72 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=94.7
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHH----HHhCCCCCCceEEeCCCCCC-----CCCC-CEEEecc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHV----IQNAPSYRGVKHIGGNMFER-----IPKG-DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~----~~~a~~~~rv~~~~~d~~~~-----~p~~-D~v~~~~ 272 (369)
..+..+|||||||+|.++..+++..++.+++++|+ +.+ .+.++...++.++.+|+..+ ++.. |+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 45668999999999999999999988779999999 653 34444456899999998763 2333 999886
Q ss_pred ccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH----HHHHHc
Q 017595 273 ILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM----ALANEA 348 (369)
Q Consensus 273 vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~----~ll~~a 348 (369)
+.++ ++...+++++++.|||||++++.-...+. +.+ .+.+++. +.++++
T Consensus 134 ~~~~---~~~~~~l~~~~r~LkpgG~l~i~~~~~~~-----------------------~~~-~~~~~~~~~~~~~l~~~ 186 (210)
T 1nt2_A 134 IAQK---NQIEILKANAEFFLKEKGEVVIMVKARSI-----------------------DST-AEPEEVFKSVLKEMEGD 186 (210)
T ss_dssp CCST---THHHHHHHHHHHHEEEEEEEEEEEEHHHH-----------------------CTT-SCHHHHHHHHHHHHHTT
T ss_pred ccCh---hHHHHHHHHHHHHhCCCCEEEEEEecCCc-----------------------ccc-CCHHHHHHHHHHHHHhh
Confidence 3222 34556799999999999999998321000 000 1222221 227888
Q ss_pred CCcceeEEEec---CceeEEEEeC
Q 017595 349 GFNGVNYECFV---CNFCIIEFIK 369 (369)
Q Consensus 349 Gf~~~~~~~~~---~~~~vi~~~~ 369 (369)
|++++..... ..+.++.++|
T Consensus 187 -f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 187 -FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp -SEEEEEEECTTTCTTEEEEEEEE
T ss_pred -cEEeeeecCCCCCCCcEEEEEEc
Confidence 9999998774 3456666553
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.32 E-value=2.1e-11 Score=104.98 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=91.9
Q ss_pred HHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C-CceEEeCCCCCCC---CCC
Q 017595 197 ILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R-GVKHIGGNMFERI---PKG 265 (369)
Q Consensus 197 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~-rv~~~~~d~~~~~---p~~ 265 (369)
++..+. .....+|||||||+|.++..+++. ..+++++|. +.+++.+++. + +++++.+|+.+.+ +..
T Consensus 47 ~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 47 TLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 344444 556789999999999999999988 778999999 8887766542 4 8999999998732 234
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
|+|++...+ +.. +++++.+.|+|||++++...... +..++.+++
T Consensus 124 D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~~-----------------------------~~~~~~~~l 167 (204)
T 3njr_A 124 EAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTLE-----------------------------SETLLTQLH 167 (204)
T ss_dssp SEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECSHH-----------------------------HHHHHHHHH
T ss_pred CEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecCcc-----------------------------cHHHHHHHH
Confidence 999987744 123 89999999999999998664210 144667788
Q ss_pred HHcCCcceeEE
Q 017595 346 NEAGFNGVNYE 356 (369)
Q Consensus 346 ~~aGf~~~~~~ 356 (369)
++.||++.++.
T Consensus 168 ~~~g~~i~~i~ 178 (204)
T 3njr_A 168 ARHGGQLLRID 178 (204)
T ss_dssp HHHCSEEEEEE
T ss_pred HhCCCcEEEEE
Confidence 88898877753
No 111
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.32 E-value=5.8e-12 Score=109.23 Aligned_cols=98 Identities=20% Similarity=0.275 Sum_probs=77.9
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-C--CCCC--CEEEeccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-R--IPKG--DAILMKWI 273 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p~~--D~v~~~~v 273 (369)
...+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .+++.++.+|+.+ + ++.+ |+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 457999999999999999999999999999999 888776654 2689999999987 3 4443 99998865
Q ss_pred cccCChh------HHHHHHHHHHHhCCCCCEEEEEe
Q 017595 274 LHNWDDE------HCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 274 lh~~~d~------~~~~~L~~~~~~L~pgG~lli~e 303 (369)
....... ....+|+++.++|+|||++++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 4322111 12579999999999999998854
No 112
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.32 E-value=1.8e-12 Score=111.99 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=83.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCC-CCCCC--CEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFE-RIPKG--DAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~ 276 (369)
....+|||||||+|.++..+++..+. +++++|. +.+++.+++ .+++.++.+|+.+ +++.+ |+|++..++|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 45689999999999999999998765 8899998 777765543 3689999999988 66543 99999999987
Q ss_pred CC-------------hhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 277 WD-------------DEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 277 ~~-------------d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
+. .++..++|++++++|+|||++++.+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 64 3466899999999999999999988653
No 113
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.32 E-value=1.6e-12 Score=115.99 Aligned_cols=125 Identities=15% Similarity=0.165 Sum_probs=96.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCCCCC--CCEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFERIPK--GDAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~~p~--~D~v~~~~vlh~ 276 (369)
....+|||+|||+|.++..+++..+ +++++|+ +.+++.+++. -.+++..+|+.+.++. .|+|++....|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~- 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE- 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH-
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH-
Confidence 3568999999999999999988766 8899998 7777665532 1289999998774433 39999865544
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEE
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYE 356 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 356 (369)
....+++++++.|+|||++++.+.... +.+++.++++++||+++++.
T Consensus 196 ----~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 196 ----LHAALAPRYREALVPGGRALLTGILKD-----------------------------RAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp ----HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTCEEEEEE
T ss_pred ----HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------CHHHHHHHHHHCCCEEEEEe
Confidence 346899999999999999999765311 25678999999999999988
Q ss_pred EecCceeEE
Q 017595 357 CFVCNFCII 365 (369)
Q Consensus 357 ~~~~~~~vi 365 (369)
...+..+++
T Consensus 243 ~~~~W~~l~ 251 (254)
T 2nxc_A 243 AEGEWVLLA 251 (254)
T ss_dssp EETTEEEEE
T ss_pred ccCCeEEEE
Confidence 777665543
No 114
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.30 E-value=6.4e-12 Score=125.76 Aligned_cols=100 Identities=14% Similarity=0.184 Sum_probs=85.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCC------------CCCceEEeCCCCC-CCCC--CCE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPS------------YRGVKHIGGNMFE-RIPK--GDA 267 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~rv~~~~~d~~~-~~p~--~D~ 267 (369)
....+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ .++++++.+|+.+ +.+. .|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 356899999999999999999998 5679999999 888776643 2579999999988 5543 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|++..++||++++....+++++++.|||| .++|..+.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999988889999999999999 77776653
No 115
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.29 E-value=1.8e-11 Score=107.02 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=96.8
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHH----hCCCCCCceEEeCCCCCC-----CCCC-CEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQ----NAPSYRGVKHIGGNMFER-----IPKG-DAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~----~a~~~~rv~~~~~d~~~~-----~p~~-D~v~~~ 271 (369)
.....+|||+|||+|.++..+++.. |+.+++++|. +.+++ .++..++++++.+|+.+. .+.. |+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4566899999999999999999884 6679999998 64443 344457899999999872 2333 999965
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
.. .......+++++++.|+|||++++. .......... ... ..+.+++.++ .++ |+
T Consensus 151 ~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~---------~~~---------~~~~~~l~~l-~~~-f~ 205 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTK---------EPE---------QVFREVEREL-SEY-FE 205 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTS---------CHH---------HHHHHHHHHH-HTT-SE
T ss_pred CC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCC---------Chh---------hhhHHHHHHH-Hhh-ce
Confidence 44 2233445699999999999999988 2211100000 000 1125677777 777 99
Q ss_pred ceeEEEecCc---eeEEEEeC
Q 017595 352 GVNYECFVCN---FCIIEFIK 369 (369)
Q Consensus 352 ~~~~~~~~~~---~~vi~~~~ 369 (369)
+++....... +.++.++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 206 VIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEEEEECTTTSSSEEEEEEEC
T ss_pred eeeEeccCcccCCCEEEEEEe
Confidence 9998877644 66666554
No 116
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.29 E-value=1.2e-11 Score=104.58 Aligned_cols=133 Identities=11% Similarity=0.133 Sum_probs=90.1
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC--CCC-CC-CEEEec-
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE--RIP-KG-DAILMK- 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~--~~p-~~-D~v~~~- 271 (369)
.....+|||+|||+|.++..+++. ..+++++|. +.+++.+++. ++++++.+|+.. .++ .. |+|++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 346689999999999999999988 678999999 8888776542 689999977755 233 33 999876
Q ss_pred cccccC------ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 272 WILHNW------DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 272 ~vlh~~------~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
..+++. ..+....+|+++++.|||||++++............ .....+|.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---------------------~~~~~~~~~~l 156 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDME---------------------KDAVLEYVIGL 156 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHH---------------------HHHHHHHHHHS
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHH---------------------HHHHHHHHHhC
Confidence 333220 225567889999999999999999875432211000 00133455556
Q ss_pred HHcCCcceeEEEec
Q 017595 346 NEAGFNGVNYECFV 359 (369)
Q Consensus 346 ~~aGf~~~~~~~~~ 359 (369)
...+|.+.+.....
T Consensus 157 ~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 157 DQRVFTAMLYQPLN 170 (185)
T ss_dssp CTTTEEEEEEEESS
T ss_pred CCceEEEEEehhhc
Confidence 66788888876664
No 117
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.29 E-value=7.4e-12 Score=110.02 Aligned_cols=140 Identities=9% Similarity=0.081 Sum_probs=95.2
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHH----HHhCCCCCCceEEeCCCCCC--CC---CC-CEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHV----IQNAPSYRGVKHIGGNMFER--IP---KG-DAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~----~~~a~~~~rv~~~~~d~~~~--~p---~~-D~v~~~ 271 (369)
+....+|||+|||+|.++..+++.+ |+.+++++|. +.+ .+.++..++++++.+|+.+. ++ .. |+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 5567899999999999999999986 7789999999 553 44444447899999999872 22 23 999985
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
.. ..+....+++++++.|+|||++++.-....... ....... + .++ .++|+++||+
T Consensus 155 ~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~----------~~~~~~~--~-------~~~-~~~l~~~Gf~ 210 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDS----------TASAEAV--F-------ASE-VKKMQQENMK 210 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCS----------SSCHHHH--H-------HHH-HHTTGGGTEE
T ss_pred CC----CccHHHHHHHHHHHHcCCCeEEEEEEccccccc----------CCCHHHH--H-------HHH-HHHHHHCCCc
Confidence 44 234456779999999999999998422100000 0000000 1 123 5888999999
Q ss_pred ceeEEEecCc---eeEEEE
Q 017595 352 GVNYECFVCN---FCIIEF 367 (369)
Q Consensus 352 ~~~~~~~~~~---~~vi~~ 367 (369)
++++...... +.++.+
T Consensus 211 ~~~~~~~~~~~~~~~~v~~ 229 (233)
T 2ipx_A 211 PQEQLTLEPYERDHAVVVG 229 (233)
T ss_dssp EEEEEECTTTSSSEEEEEE
T ss_pred eEEEEecCCccCCcEEEEE
Confidence 9997766532 444444
No 118
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.29 E-value=1.1e-11 Score=108.53 Aligned_cols=127 Identities=11% Similarity=0.128 Sum_probs=93.8
Q ss_pred cCCcceEEEEcCC-hhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCC--CCCCCC--CEEEecc
Q 017595 204 FEQIKQLVDVGGG-LGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMF--ERIPKG--DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~--~~~p~~--D~v~~~~ 272 (369)
.....+|||+||| +|.++..+++.. ..+++++|. +.+++.+++. .+++++.+|+. .+++.. |+|++..
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 3467899999999 999999999987 678999999 8887766532 27999999964 345433 9999987
Q ss_pred ccccCChh-----------------HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCcc
Q 017595 273 ILHNWDDE-----------------HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRE 335 (369)
Q Consensus 273 vlh~~~d~-----------------~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 335 (369)
.+++.++. ....+++++.+.|+|||++++.-....
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------------- 183 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------------- 183 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH----------------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH----------------------------
Confidence 77654332 137899999999999999998643210
Q ss_pred CCHHHHHHHHHHcCCcceeEEEec
Q 017595 336 RTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 336 ~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
...+++.+++++.||++..+....
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~~~~ 207 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIKFKV 207 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECC
T ss_pred hHHHHHHHHHHHcCCceEEEEecC
Confidence 014578889999999877665443
No 119
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=1.8e-12 Score=113.41 Aligned_cols=114 Identities=11% Similarity=0.112 Sum_probs=88.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC--CCC-C-C-CEEEeccccccC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE--RIP-K-G-DAILMKWILHNW 277 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~--~~p-~-~-D~v~~~~vlh~~ 277 (369)
....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +++ . . |+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~----- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR----- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-----
Confidence 35689999999999999999988 568999999 888877664 4789999999976 444 3 3 9998871
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEE
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYEC 357 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 357 (369)
+...+|++++++|||||+++.. +...+.+++.++++++||+.+++..
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~------------------------------~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 120 ---GPTSVILRLPELAAPDAHFLYV------------------------------GPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp ---CCSGGGGGHHHHEEEEEEEEEE------------------------------ESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCcEEEEe------------------------------CCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 2347899999999999999811 0112355788889999999877654
Q ss_pred e
Q 017595 358 F 358 (369)
Q Consensus 358 ~ 358 (369)
.
T Consensus 167 ~ 167 (226)
T 3m33_A 167 V 167 (226)
T ss_dssp E
T ss_pred e
Confidence 3
No 120
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.28 E-value=8.2e-12 Score=108.29 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=76.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-C--CCCC--CEEEeccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-R--IPKG--DAILMKWI 273 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p~~--D~v~~~~v 273 (369)
...+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .+++.++.+|+.+ + ++.+ |.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 457899999999999999999999999999999 777776643 3689999999977 3 5543 88876543
Q ss_pred cccCChhH------HHHHHHHHHHhCCCCCEEEEEe
Q 017595 274 LHNWDDEH------CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 274 lh~~~d~~------~~~~L~~~~~~L~pgG~lli~e 303 (369)
..+..... ...+|+++++.|+|||+|++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 32111100 2578999999999999998864
No 121
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.28 E-value=1.7e-12 Score=117.12 Aligned_cols=125 Identities=10% Similarity=0.063 Sum_probs=93.8
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCCCCCCC-
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFERIPKG- 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p~~- 265 (369)
.++..++ .....+|||+|||+|.++..+++. +|..+++++|. +.+++.+++ .++++++.+|+.++++..
T Consensus 101 ~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 101 YIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp -----CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 4455554 667789999999999999999998 78899999999 777765542 257999999998866543
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHH
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMAL 344 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~l 344 (369)
|+|++ ++++. ..+|+++.++|+|||++++...... ..+++.+.
T Consensus 180 fD~Vi~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~-----------------------------~~~~~~~~ 223 (275)
T 1yb2_A 180 YDAVIA-----DIPDP--WNHVQKIASMMKPGSVATFYLPNFD-----------------------------QSEKTVLS 223 (275)
T ss_dssp EEEEEE-----CCSCG--GGSHHHHHHTEEEEEEEEEEESSHH-----------------------------HHHHHHHH
T ss_pred ccEEEE-----cCcCH--HHHHHHHHHHcCCCCEEEEEeCCHH-----------------------------HHHHHHHH
Confidence 99987 34433 4789999999999999999874210 13456667
Q ss_pred HHHcCCcceeEEE
Q 017595 345 ANEAGFNGVNYEC 357 (369)
Q Consensus 345 l~~aGf~~~~~~~ 357 (369)
++++||+.+++..
T Consensus 224 l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 224 LSASGMHHLETVE 236 (275)
T ss_dssp SGGGTEEEEEEEE
T ss_pred HHHCCCeEEEEEE
Confidence 7788998887765
No 122
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.28 E-value=8.9e-12 Score=114.02 Aligned_cols=129 Identities=13% Similarity=0.146 Sum_probs=94.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCC-CC--C-CC-CEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFE-RI--P-KG-DAI 268 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~-~~--p-~~-D~v 268 (369)
....+|||||||+|.++..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ .. + .. |+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999998878889999999 887776543 2689999999876 21 2 33 999
Q ss_pred EeccccccCChhHH--HHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 269 LMKWILHNWDDEHC--LTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 269 ~~~~vlh~~~d~~~--~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
++....+..++... ..++++++++|+|||++++....... .....+++.+.++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------------------------~~~~~~~~~~~l~ 228 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-------------------------DLELIEKMSRFIR 228 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT-------------------------CHHHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-------------------------chHHHHHHHHHHH
Confidence 99777666543332 58999999999999999987432100 0012567888999
Q ss_pred HcCCcceeEEEe
Q 017595 347 EAGFNGVNYECF 358 (369)
Q Consensus 347 ~aGf~~~~~~~~ 358 (369)
++||..+++...
T Consensus 229 ~~GF~~v~~~~~ 240 (304)
T 3bwc_A 229 ETGFASVQYALM 240 (304)
T ss_dssp HHTCSEEEEEEC
T ss_pred hCCCCcEEEEEe
Confidence 999998887654
No 123
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.27 E-value=7e-12 Score=111.63 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=98.5
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPKG 265 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~~ 265 (369)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.+++. ++++++.+|+.+.++..
T Consensus 83 ~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 83 ALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 34555555 667789999999999999999999 88999999999 8888776542 45999999999866653
Q ss_pred --CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 266 --DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 266 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
|+|++ +.++. ..+++++.++|+|||++++..+... ..+++.+
T Consensus 162 ~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~ 205 (255)
T 3mb5_A 162 NVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCSN-----------------------------QVMRLHE 205 (255)
T ss_dssp SEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSHH-----------------------------HHHHHHH
T ss_pred CcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCHH-----------------------------HHHHHHH
Confidence 99987 34333 4789999999999999998764310 1345677
Q ss_pred HHHHcC--CcceeEEEe
Q 017595 344 LANEAG--FNGVNYECF 358 (369)
Q Consensus 344 ll~~aG--f~~~~~~~~ 358 (369)
+++++| |..+++...
T Consensus 206 ~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 206 KLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHTGGGBSCCEEECC
T ss_pred HHHHcCCCccccEEEEE
Confidence 888889 888877644
No 124
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.27 E-value=6.3e-12 Score=106.39 Aligned_cols=120 Identities=20% Similarity=0.183 Sum_probs=91.9
Q ss_pred HHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------C-CCceEEeCCCCCCCC---CC
Q 017595 197 ILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------Y-RGVKHIGGNMFERIP---KG 265 (369)
Q Consensus 197 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~rv~~~~~d~~~~~p---~~ 265 (369)
+++.++ .....+|||+|||+|.++..+++.. .+++++|. +.+++.+++ . +++.++.+|+.++++ ..
T Consensus 25 ~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 101 (192)
T 1l3i_A 25 IMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDI 101 (192)
T ss_dssp HHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCE
T ss_pred HHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCC
Confidence 333344 5567899999999999999999887 78999998 777776553 1 589999999876333 23
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHH
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALA 345 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll 345 (369)
|+|++..+++++ ..+++++.+.|+|||++++..... .+..++.+++
T Consensus 102 D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~~~~~~~~l 147 (192)
T 1l3i_A 102 DIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAILL-----------------------------ETKFEAMECL 147 (192)
T ss_dssp EEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECBH-----------------------------HHHHHHHHHH
T ss_pred CEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecCc-----------------------------chHHHHHHHH
Confidence 999999887653 678999999999999999876421 0135678889
Q ss_pred HHcCCcce
Q 017595 346 NEAGFNGV 353 (369)
Q Consensus 346 ~~aGf~~~ 353 (369)
++.||.+.
T Consensus 148 ~~~g~~~~ 155 (192)
T 1l3i_A 148 RDLGFDVN 155 (192)
T ss_dssp HHTTCCCE
T ss_pred HHCCCceE
Confidence 99999543
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.26 E-value=1.1e-11 Score=105.91 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=80.6
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-C-CC-CC-CEEEe
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-R-IP-KG-DAILM 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~-~p-~~-D~v~~ 270 (369)
.....+|||+|||+|.++..+++.+ |+.+++++|. +.+++.+++. ++++++.+|+.+ + .. .. |+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3456899999999999999999985 6789999999 8888776542 579999999876 2 33 33 99998
Q ss_pred cccccc-------CChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 271 KWILHN-------WDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 271 ~~vlh~-------~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
...+.. ...++..++++++.+.|+|||++++.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 865511 122355679999999999999999987543
No 126
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.25 E-value=1e-11 Score=116.72 Aligned_cols=108 Identities=17% Similarity=0.235 Sum_probs=86.5
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC---------CCceEEeCCCCCCCCCC
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY---------RGVKHIGGNMFERIPKG 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~rv~~~~~d~~~~~p~~ 265 (369)
.+++.++ .....+|||+|||+|.++..+++.+|..+++++|. +.+++.+++. .+++++.+|++++++..
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~ 291 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 291 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTT
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCC
Confidence 4556565 44458999999999999999999999999999999 8887776542 25888999999976643
Q ss_pred --CEEEecccccc---CChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 266 --DAILMKWILHN---WDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 266 --D~v~~~~vlh~---~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
|+|++...+|+ .++....++++++.+.|+|||+++++..
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 99999999885 3455566899999999999999999754
No 127
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.25 E-value=5.1e-12 Score=111.65 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=92.9
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CC----CCC-CEEEec
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RI----PKG-DAILMK 271 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~----p~~-D~v~~~ 271 (369)
....+|||||||+|..+..++...|+.+++++|. +.+++.+++ .++++++.+|+.+ +. +.. |+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4668999999999999999999899999999999 777776653 2579999999876 43 233 999987
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
.+ .+...+++.++++|+|||++++....... . ..+++.+.+++.||+
T Consensus 149 ~~------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~-------~--------------------~~~~~~~~l~~~g~~ 195 (240)
T 1xdz_A 149 AV------ARLSVLSELCLPLVKKNGLFVALKAASAE-------E--------------------ELNAGKKAITTLGGE 195 (240)
T ss_dssp CC------SCHHHHHHHHGGGEEEEEEEEEEECC-CH-------H--------------------HHHHHHHHHHHTTEE
T ss_pred cc------CCHHHHHHHHHHhcCCCCEEEEEeCCCch-------H--------------------HHHHHHHHHHHcCCe
Confidence 63 23568999999999999999986421100 0 124577788999999
Q ss_pred ceeEEEe
Q 017595 352 GVNYECF 358 (369)
Q Consensus 352 ~~~~~~~ 358 (369)
++++...
T Consensus 196 ~~~~~~~ 202 (240)
T 1xdz_A 196 LENIHSF 202 (240)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 8887543
No 128
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.24 E-value=9.6e-12 Score=103.86 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=97.8
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C-CceEEeCCCCCC-CCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R-GVKHIGGNMFER-IPKG 265 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~-rv~~~~~d~~~~-~p~~ 265 (369)
+.+...++ ...+|||+|||+|.++..++...|+++++++|. +.+++.++.. . ++++ .|.... .+..
T Consensus 41 ~~~~~~l~---~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~ 115 (200)
T 3fzg_A 41 TYVFGNIK---HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGT 115 (200)
T ss_dssp HHHHHHSC---CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSE
T ss_pred HHHHhhcC---CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCC
Confidence 34444443 578999999999999999999999999999999 8888877642 2 4555 666653 3333
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHH
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMAL 344 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~l 344 (369)
|+|++..+||++ ++....+.++++.|+|||.+|-.+.-.=..+. .+-.......|.+.
T Consensus 116 ~DvVLa~k~LHlL--~~~~~al~~v~~~L~pggvfISfptksl~Gr~-------------------~gm~~~Y~~~~~~~ 174 (200)
T 3fzg_A 116 YDVVFLLKMLPVL--KQQDVNILDFLQLFHTQNFVISFPIKSLSGKE-------------------KGMEENYQLWFESF 174 (200)
T ss_dssp EEEEEEETCHHHH--HHTTCCHHHHHHTCEEEEEEEEEECCCCC--C-------------------TTCCCCHHHHHHHH
T ss_pred cChhhHhhHHHhh--hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCC-------------------cchhhhHHHHHHHh
Confidence 999999999999 44556677999999999988887732111110 01122335566666
Q ss_pred HHHcCCcceeEEEecCc
Q 017595 345 ANEAGFNGVNYECFVCN 361 (369)
Q Consensus 345 l~~aGf~~~~~~~~~~~ 361 (369)
+ ...+.+++....++-
T Consensus 175 ~-~~~~~~~~~~~~~nE 190 (200)
T 3fzg_A 175 T-KGWIKILDSKVIGNE 190 (200)
T ss_dssp T-TTTSCEEEEEEETTE
T ss_pred c-cCcceeeeeeeeCce
Confidence 6 556666666555543
No 129
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.24 E-value=6.6e-11 Score=103.40 Aligned_cols=141 Identities=9% Similarity=0.107 Sum_probs=94.2
Q ss_pred cCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHH----HHhCCCCCCceEEeCCCCCCC-----CCC-CEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHV----IQNAPSYRGVKHIGGNMFERI-----PKG-DAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~----~~~a~~~~rv~~~~~d~~~~~-----p~~-D~v~~~ 271 (369)
+....+|||+|||+|.++..+++. .|+.+++++|. +.+ ++.+++..++.++.+|+..+. ... |+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 567789999999999999999987 46889999999 654 344444578999999997631 223 999877
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
... + .....+++.+++.|||||+|++.-.....+ . +..-.. ..++..+.|+++||+
T Consensus 154 ~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d--------------~-----t~~~~e-~~~~~~~~L~~~gf~ 209 (232)
T 3id6_C 154 IAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSID--------------V-----TKDPKE-IYKTEVEKLENSNFE 209 (232)
T ss_dssp CCC---T-THHHHHHHHHHHHEEEEEEEEEEEC--------------------------CCSSS-STTHHHHHHHHTTEE
T ss_pred CCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcc--------------c-----CCCHHH-HHHHHHHHHHHCCCE
Confidence 543 2 333345566777999999999874221100 0 001111 123455577889999
Q ss_pred ceeEEEecC---ceeEEEEe
Q 017595 352 GVNYECFVC---NFCIIEFI 368 (369)
Q Consensus 352 ~~~~~~~~~---~~~vi~~~ 368 (369)
+++...+.+ .+.++.++
T Consensus 210 ~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 210 TIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp EEEEEECTTTCSSCEEEEEE
T ss_pred EEEEeccCCCcCceEEEEEE
Confidence 999988753 36655554
No 130
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.24 E-value=1.2e-12 Score=116.71 Aligned_cols=145 Identities=10% Similarity=0.062 Sum_probs=94.8
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC----CCC----C-CCEE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE----RIP----K-GDAI 268 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~----~~p----~-~D~v 268 (369)
...+|||+|||+|.++..++.++|+.+++++|+ +.+++.+++. ++++++.+|+.+ +++ . .|+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 457999999999999999999988899999999 8888766542 469999999543 444 2 3999
Q ss_pred EeccccccCCh-------------hHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCcc
Q 017595 269 LMKWILHNWDD-------------EHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRE 335 (369)
Q Consensus 269 ~~~~vlh~~~d-------------~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 335 (369)
++...+|+... +....++.+++++|||||.+.+++.+... ...............+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~---------~~~~l~~~g~~~~~~~~~ 215 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHD---------SLQLKKRLRWYSCMLGKK 215 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHH---------HHHHGGGBSCEEEEESST
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHH---------HHhcccceEEEEECCCCh
Confidence 99877665431 11235678899999999998887653211 000000000000112334
Q ss_pred CCHHHHHHHHHHcCCcceeEEEec
Q 017595 336 RTTQEFMALANEAGFNGVNYECFV 359 (369)
Q Consensus 336 ~t~~e~~~ll~~aGf~~~~~~~~~ 359 (369)
.+.+++.++++++||+.+++....
T Consensus 216 ~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 216 CSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp TSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCceEEEEEe
Confidence 456889999999999998887664
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.23 E-value=6.1e-12 Score=108.31 Aligned_cols=91 Identities=13% Similarity=0.170 Sum_probs=74.7
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCCCC-CC-CEEEeccccccC
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFERIP-KG-DAILMKWILHNW 277 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p-~~-D~v~~~~vlh~~ 277 (369)
..+|||||||+|.++..++..+|+.+++++|. +.+++.++. .++++++.+|+.+..+ .. |+|++..+ +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~-- 142 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A-- 142 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S--
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C--
Confidence 57999999999999999999999999999999 777776653 2459999999988433 33 99987542 2
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
....+++++++.|+|||++++..
T Consensus 143 ---~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 143 ---SLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ---SHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHhcCCCcEEEEEe
Confidence 24589999999999999999864
No 132
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.23 E-value=4.7e-11 Score=106.67 Aligned_cols=124 Identities=11% Similarity=0.137 Sum_probs=93.3
Q ss_pred cC-CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-C--CCC-C-CEEE
Q 017595 204 FE-QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-R--IPK-G-DAIL 269 (369)
Q Consensus 204 ~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~--~p~-~-D~v~ 269 (369)
.. ...+|||+|||+|.++..++++.+. +++++|+ +.+++.+++. ++++++.+|+.+ . ++. . |+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 55 6789999999999999999999776 9999999 8887766542 479999999987 2 333 3 9999
Q ss_pred eccccccC------------------ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhc
Q 017595 270 MKWILHNW------------------DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFS 331 (369)
Q Consensus 270 ~~~vlh~~------------------~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 331 (369)
+...++.. .......+++.+.++|+|||+++++... .
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~----------------------- 179 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP--E----------------------- 179 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT--T-----------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH--H-----------------------
Confidence 97554322 1133567999999999999999985321 0
Q ss_pred CCccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 332 GGRERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 332 ~~~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
...++.+++++.||...++.+.
T Consensus 180 -----~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 180 -----RLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -----THHHHHHHHHHTTEEEEEEEEE
T ss_pred -----HHHHHHHHHHHCCCceEEEEEe
Confidence 1446777888899998887665
No 133
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.23 E-value=1.4e-11 Score=110.79 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=78.9
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCCCCCEEEeccccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIPKGDAILMKWILH 275 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p~~D~v~~~~vlh 275 (369)
+....+|||||||+|.++..++.+.++.+++++|+ +.+++.|++. ++++++.+|+.+ +-...|+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC--
Confidence 66789999999999988777777778999999999 8888887642 689999999987 4222399987654
Q ss_pred cCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 276 NWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 276 ~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
. ++..++++++++.|||||+|++.+.
T Consensus 198 -~--~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 -A--EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -C--SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -c--cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 4456899999999999999998763
No 134
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.23 E-value=2e-11 Score=109.08 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=77.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCCC--CEEEeccccccCChhH
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPKG--DAILMKWILHNWDDEH 281 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d~~ 281 (369)
...+|||||||+|.++..+++. ..+++++|. +.+++.+++...-.++.+|+.+ +++.+ |+|++..+++|+.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~- 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN- 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC-
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc-
Confidence 5689999999999999999987 468999999 7887766543211388899987 66543 999999877766433
Q ss_pred HHHHHHHHHHhCCCCCEEEEEecc
Q 017595 282 CLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 282 ~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
...+|++++++|+|||++++....
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 679999999999999999987754
No 135
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=5e-11 Score=102.00 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=80.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCC--CCeEEEcchhHHHHhCCCCCCceEEeCCCCC-C---------
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYP--HIEGVNFDLPHVIQNAPSYRGVKHIGGNMFE-R--------- 261 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p--~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~--------- 261 (369)
+.++.+.+..+....+|||||||+|.++..+++++| +.+++++|+..+ ...++++++.+|+.+ +
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~----~~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM----DPIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC----CCCTTCEEEECCTTTTSSCCC-----
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc----CCCCCceEEEccccchhhhhhccccc
Confidence 445555555345668999999999999999999998 689999999442 224689999999987 4
Q ss_pred ----------------CCC-C-CEEEeccccccCC----hhH-----HHHHHHHHHHhCCCCCEEEEEe
Q 017595 262 ----------------IPK-G-DAILMKWILHNWD----DEH-----CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 262 ----------------~p~-~-D~v~~~~vlh~~~----d~~-----~~~~L~~~~~~L~pgG~lli~e 303 (369)
++. . |+|++...+|+.. +.. ..++|++++++|+|||++++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 343 3 9999988877532 111 1358999999999999998754
No 136
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.22 E-value=5.6e-12 Score=117.45 Aligned_cols=110 Identities=17% Similarity=0.261 Sum_probs=88.0
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCCCCCC-CE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFERIPKG-DA 267 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~~p~~-D~ 267 (369)
..+++.++ .....+|||||||+|.++..+++.+|+.+++++|. +.+++.+++. ..++++.+|+++..+.. |+
T Consensus 186 ~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~ 264 (343)
T 2pjd_A 186 QLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDM 264 (343)
T ss_dssp HHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEE
T ss_pred HHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeE
Confidence 34555554 33457999999999999999999999999999999 7777766542 34678999998744444 99
Q ss_pred EEecccccc---CChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 268 ILMKWILHN---WDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 268 v~~~~vlh~---~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|++..++|+ .+.+...++|++++++|+|||+++++...
T Consensus 265 Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 265 IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 999999986 23466789999999999999999998764
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.22 E-value=7.8e-12 Score=108.78 Aligned_cols=99 Identities=10% Similarity=0.178 Sum_probs=76.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCC----CCCC--CEEEecc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFER----IPKG--DAILMKW 272 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~----~p~~--D~v~~~~ 272 (369)
...+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .++++++.+|+.+. ++.+ |.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 457999999999999999999999999999999 777766543 36799999998662 4543 8888765
Q ss_pred ccccCChhHH------HHHHHHHHHhCCCCCEEEEEec
Q 017595 273 ILHNWDDEHC------LTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 273 vlh~~~d~~~------~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.......... ..+++.++++|||||++++...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 4432222221 2599999999999999988653
No 138
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.22 E-value=3.3e-11 Score=110.72 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=80.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------------CCceEEeCCCCC-C----CC--C
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------------RGVKHIGGNMFE-R----IP--K 264 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------------~rv~~~~~d~~~-~----~p--~ 264 (369)
...+|||||||+|.++..+++. +..+++++|+ +.+++.+++. .++.++.+|+.+ + ++ .
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 5679999999999999998874 5778999999 7777765432 378999999987 4 42 2
Q ss_pred -C-CEEEeccccccC--ChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 265 -G-DAILMKWILHNW--DDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 265 -~-D~v~~~~vlh~~--~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
. |+|++..++|+. +.++...+|++++++|+|||++++..+
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 3 999999999987 446678999999999999999998766
No 139
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=1.4e-11 Score=109.77 Aligned_cols=127 Identities=12% Similarity=0.132 Sum_probs=96.9
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCC-CCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p~ 264 (369)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.+++ .++++++.+|+.+ +++.
T Consensus 86 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 45666565 667789999999999999999999 77889999998 777776543 3689999999988 4664
Q ss_pred C--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH
Q 017595 265 G--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM 342 (369)
Q Consensus 265 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~ 342 (369)
. |+|++ ++++. ..+|+++.++|+|||++++..+... ...++.
T Consensus 165 ~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~ 208 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEP--WKVLEKAALALKPDRFLVAYLPNIT-----------------------------QVLELV 208 (258)
T ss_dssp TCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEESCHH-----------------------------HHHHHH
T ss_pred CCcCEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeCCHH-----------------------------HHHHHH
Confidence 3 99987 34333 4789999999999999999875310 023455
Q ss_pred HHHHHcCCcceeEEEe
Q 017595 343 ALANEAGFNGVNYECF 358 (369)
Q Consensus 343 ~ll~~aGf~~~~~~~~ 358 (369)
+.++++||..+++...
T Consensus 209 ~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 209 RAAEAHPFRLERVLEV 224 (258)
T ss_dssp HHHTTTTEEEEEEEEE
T ss_pred HHHHHCCCceEEEEEe
Confidence 6677889987776553
No 140
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.22 E-value=4.8e-11 Score=107.45 Aligned_cols=150 Identities=10% Similarity=0.114 Sum_probs=97.2
Q ss_pred HHHHHHhccCcC-CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHh-CCCCCCceEEe-CCCCC----CCCC-
Q 017595 194 MNRILDSYNGFE-QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQN-APSYRGVKHIG-GNMFE----RIPK- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~-a~~~~rv~~~~-~d~~~----~~p~- 264 (369)
...+++.+. ++ ...+|||||||+|.++..+++. +..+++++|. +.+++. .+..+++.... .|+.. .+|.
T Consensus 73 l~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 73 LEKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp HHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTC
T ss_pred HHHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCC
Confidence 445666665 44 4579999999999999998887 4458999999 777665 34445665443 34422 2343
Q ss_pred -CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEe-ccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHH
Q 017595 265 -GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIID-RMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFM 342 (369)
Q Consensus 265 -~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~ 342 (369)
.|++++..++|++ ..+|.+++++|+|||++++.- +-.+..+ . .........|... +.++.+++.
T Consensus 151 ~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~-~-~~~~~G~vrd~~~-------~~~~~~~v~ 216 (291)
T 3hp7_A 151 LPSFASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGR-E-QIGKNGIVRESSI-------HEKVLETVT 216 (291)
T ss_dssp CCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCG-G-GCC-CCCCCCHHH-------HHHHHHHHH
T ss_pred CCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccCh-h-hcCCCCccCCHHH-------HHHHHHHHH
Confidence 3999998888865 468999999999999999862 1111100 0 0000000001111 113578899
Q ss_pred HHHHHcCCcceeEEEec
Q 017595 343 ALANEAGFNGVNYECFV 359 (369)
Q Consensus 343 ~ll~~aGf~~~~~~~~~ 359 (369)
++++++||++..+...+
T Consensus 217 ~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 217 AFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp HHHHHTTEEEEEEEECS
T ss_pred HHHHHCCCEEEEEEECC
Confidence 99999999988876643
No 141
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.21 E-value=1.7e-11 Score=111.97 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=75.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----C--------CceEEeCCCCC---------CCC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----R--------GVKHIGGNMFE---------RIP 263 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~--------rv~~~~~d~~~---------~~p 263 (369)
...+|||||||+|..+..++.. ...+++++|+ +.+++.|+++ . ++++...|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3579999999999876666554 3458999999 8888877653 1 25677887732 233
Q ss_pred CC--CEEEeccccccC-ChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 264 KG--DAILMKWILHNW-DDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 264 ~~--D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.+ |+|++..++|+. ++++...+|++++++|||||++++..+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33 999999999974 445567999999999999999988766
No 142
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.21 E-value=7.5e-11 Score=102.26 Aligned_cols=128 Identities=13% Similarity=0.070 Sum_probs=100.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC---CCEEEecccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK---GDAILMKWIL 274 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~---~D~v~~~~vl 274 (369)
+..+|+|||||+|.++..++..+|..+++++|. +..++.|++. ++|+++.+|.+++++. .|+|+...+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~- 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM- 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC-
Confidence 557999999999999999999999999999999 8887776542 5799999999986652 498887765
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCccee
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVN 354 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 354 (369)
..+....+|..+.+.|+|+|++++.-.. ....++++|.+.||.+++
T Consensus 94 ---Gg~~i~~Il~~~~~~L~~~~~lVlq~~~-------------------------------~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 ---GGRLIARILEEGLGKLANVERLILQPNN-------------------------------REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp ---CHHHHHHHHHHTGGGCTTCCEEEEEESS-------------------------------CHHHHHHHHHHTTEEEEE
T ss_pred ---ChHHHHHHHHHHHHHhCCCCEEEEECCC-------------------------------CHHHHHHHHHHCCCEEEE
Confidence 3345678999999999999998874321 145678889999999887
Q ss_pred EEEe---cCceeEEEEe
Q 017595 355 YECF---VCNFCIIEFI 368 (369)
Q Consensus 355 ~~~~---~~~~~vi~~~ 368 (369)
-.-+ .-.+.||.+.
T Consensus 140 e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 140 ESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEEEEEE
Confidence 6432 3456677664
No 143
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.21 E-value=3.6e-11 Score=105.54 Aligned_cols=151 Identities=12% Similarity=0.108 Sum_probs=88.8
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeC-CCC----CCCCC--
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGG-NMF----ERIPK-- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~-d~~----~~~p~-- 264 (369)
....++.++......+|||||||+|.++..+++.. ..+++++|+ +.+++.+.+ .+++..... ++. .+++.
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR 103 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC
Confidence 34555556522345799999999999999999883 348999999 777665432 233332221 111 11222
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcch-HHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEAT-AAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
.|.+.+..++.++ ..+|++++++|||||++++.- .+...... .........+... ...+.++|.+
T Consensus 104 ~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~~e~~~~~~~~~G~~~d~~~-------~~~~~~~l~~ 169 (232)
T 3opn_A 104 PSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KPQFEAGREQVGKNGIIRDPKV-------HQMTIEKVLK 169 (232)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHHHHSCHHHHC-CCCCCCHHH-------HHHHHHHHHH
T ss_pred CCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--CcccccCHHHhCcCCeecCcch-------hHHHHHHHHH
Confidence 2555555555544 468999999999999999853 11000000 0000000001111 1136889999
Q ss_pred HHHHcCCcceeEEEec
Q 017595 344 LANEAGFNGVNYECFV 359 (369)
Q Consensus 344 ll~~aGf~~~~~~~~~ 359 (369)
+++++||+++.+...+
T Consensus 170 ~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 170 TATQLGFSVKGLTFSP 185 (232)
T ss_dssp HHHHHTEEEEEEEECS
T ss_pred HHHHCCCEEEEEEEcc
Confidence 9999999998886543
No 144
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.20 E-value=8.1e-12 Score=110.95 Aligned_cols=122 Identities=11% Similarity=0.042 Sum_probs=93.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CCC----C-CCEEEec
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RIP----K-GDAILMK 271 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p----~-~D~v~~~ 271 (369)
....+|||||||+|..+..++..+|+.+++++|. +.+++.+++ ..+|+++.+|+.+ +.. . .|+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999999999999999999999999 777776654 2569999999876 331 2 3999987
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCc
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFN 351 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 351 (369)
.+- +...+++.+.+.|+|||++++....... . ...++...+++.||+
T Consensus 159 a~~------~~~~ll~~~~~~LkpgG~l~~~~g~~~~-------~--------------------e~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 159 AVA------PLCVLSELLLPFLEVGGAAVAMKGPRVE-------E--------------------ELAPLPPALERLGGR 205 (249)
T ss_dssp SSC------CHHHHHHHHGGGEEEEEEEEEEECSCCH-------H--------------------HHTTHHHHHHHHTEE
T ss_pred CcC------CHHHHHHHHHHHcCCCeEEEEEeCCCcH-------H--------------------HHHHHHHHHHHcCCe
Confidence 542 2357899999999999999986642110 0 022466677888999
Q ss_pred ceeEEEec
Q 017595 352 GVNYECFV 359 (369)
Q Consensus 352 ~~~~~~~~ 359 (369)
+.++.+..
T Consensus 206 ~~~~~~~~ 213 (249)
T 3g89_A 206 LGEVLALQ 213 (249)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 98887653
No 145
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.20 E-value=1.5e-11 Score=103.08 Aligned_cols=109 Identities=8% Similarity=0.065 Sum_probs=83.5
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--CCceEEeCCCCC-CC---CCC--CEEEecccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--RGVKHIGGNMFE-RI---PKG--DAILMKWIL 274 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~rv~~~~~d~~~-~~---p~~--D~v~~~~vl 274 (369)
.....+|||||||. +.+|. +.+++.+++. .+++++.+|+.+ +. +.. |+|++..++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 55678999999996 23787 7777766543 369999999987 44 443 999999999
Q ss_pred ccC-ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCC
Q 017595 275 HNW-DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGF 350 (369)
Q Consensus 275 h~~-~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf 350 (369)
||+ ++. .++|++++++|||||++++.++...... .....++.++|.++|+++||
T Consensus 74 ~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVD--------------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSC--------------------SSSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCH--HHHHHHHHHHCCCCEEEEEEcccccccc--------------------cccccCCHHHHHHHHHHCCC
Confidence 998 554 6899999999999999999765432110 01223678999999999999
No 146
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.20 E-value=3.8e-11 Score=100.08 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=83.7
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcchhHHHHhCCCCCCceEEeCCCCC-C--------CCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFE-R--------IPK 264 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~--------~p~ 264 (369)
..+++.+.......+|||+|||+|.++..+++.+ |+.+++++|...+++ .++++++.+|+.+ + ++.
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCC
Confidence 3455555434566799999999999999999994 778999999944332 2789999999988 4 553
Q ss_pred -C-CEEEeccccccCChhH---------HHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 -G-DAILMKWILHNWDDEH---------CLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 -~-D~v~~~~vlh~~~d~~---------~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
. |+|++..++|+.+... ...+++++.+.|+|||++++....
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 3 9999999988765431 158999999999999999987764
No 147
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.20 E-value=1e-10 Score=101.60 Aligned_cols=128 Identities=11% Similarity=0.024 Sum_probs=101.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC---CCEEEecccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK---GDAILMKWIL 274 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~---~D~v~~~~vl 274 (369)
+..+|+|||||+|.++..+++..|..+++++|. +..++.|++. ++|+++.+|.++.++. .|+|+...+.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 568999999999999999999999889999999 8888776642 5799999999985442 4998877664
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCccee
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVN 354 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 354 (369)
.+....+|....+.|+++|+|++.-.. ..+.+++++.+.||.+++
T Consensus 101 ----g~lI~~IL~~~~~~l~~~~~lIlqp~~-------------------------------~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 101 ----GRLIADILNNDIDKLQHVKTLVLQPNN-------------------------------REDDLRKWLAANDFEIVA 145 (230)
T ss_dssp ----HHHHHHHHHHTGGGGTTCCEEEEEESS-------------------------------CHHHHHHHHHHTTEEEEE
T ss_pred ----hHHHHHHHHHHHHHhCcCCEEEEECCC-------------------------------ChHHHHHHHHHCCCEEEE
Confidence 355778999999999999998875421 155788899999999887
Q ss_pred EEEe---cCceeEEEEe
Q 017595 355 YECF---VCNFCIIEFI 368 (369)
Q Consensus 355 ~~~~---~~~~~vi~~~ 368 (369)
-.-+ .-.+.||.+.
T Consensus 146 E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 146 EDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEC--CEEEEEEEE
T ss_pred EEEEEECCEEEEEEEEE
Confidence 6543 3557777764
No 148
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=3.6e-11 Score=100.95 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=91.4
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCCC--CC
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIPK--GD 266 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p~--~D 266 (369)
.+++.++ .....+|||+|||+|.++..+++ +..+++++|. +.+++.+++. ++++++.+|+.++++. .|
T Consensus 26 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 102 (183)
T 2yxd_A 26 VSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFN 102 (183)
T ss_dssp HHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCS
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCc
Confidence 3444444 55668999999999999999998 7889999998 7777766542 5899999999875543 39
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
+|++..+ .....+++++++. |||++++...... +..++.++++
T Consensus 103 ~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~-----------------------------~~~~~~~~l~ 145 (183)
T 2yxd_A 103 KAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE-----------------------------NAAKIINEFE 145 (183)
T ss_dssp EEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH-----------------------------HHHHHHHHHH
T ss_pred EEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc-----------------------------cHHHHHHHHH
Confidence 9999988 2345789999888 9999998774210 1345778889
Q ss_pred HcCCcceeE
Q 017595 347 EAGFNGVNY 355 (369)
Q Consensus 347 ~aGf~~~~~ 355 (369)
+.||.+..+
T Consensus 146 ~~g~~~~~~ 154 (183)
T 2yxd_A 146 SRGYNVDAV 154 (183)
T ss_dssp HTTCEEEEE
T ss_pred HcCCeEEEE
Confidence 999876554
No 149
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.19 E-value=6.9e-11 Score=112.33 Aligned_cols=111 Identities=14% Similarity=0.210 Sum_probs=85.2
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhC-------CC--------CCCceEEeCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNA-------PS--------YRGVKHIGGNM 258 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-------~~--------~~rv~~~~~d~ 258 (369)
..+++.+. .....+|||||||+|.++..+++.++..+++++|+ +.+++.| +. ..+++++.+|.
T Consensus 232 ~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 232 SDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 34555555 66778999999999999999999888778999998 6665554 21 35899998755
Q ss_pred C-CC--C----CCCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCC
Q 017595 259 F-ER--I----PKGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVT 309 (369)
Q Consensus 259 ~-~~--~----p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~ 309 (369)
+ .+ + ...|+|++..+++ . ++...+|+++.+.|||||+|++.+.+.+..
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~-~--~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLF-D--EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTC-C--HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred cccccccccccCCCCEEEEeCccc-c--ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 4 32 2 1249999887773 2 556788999999999999999998876654
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.18 E-value=5.3e-11 Score=105.69 Aligned_cols=109 Identities=18% Similarity=0.196 Sum_probs=84.4
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHh--CCCCeEEEcch-hHHHHhCCCC---C-------C------------
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSR--YPHIEGVNFDL-PHVIQNAPSY---R-------G------------ 250 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~~---~-------r------------ 250 (369)
.+++.++ .....+|||+|||+|.++..+++. ++..+++++|+ +.+++.++.. . +
T Consensus 42 ~~l~~~~-~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 42 RALARLP-GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFG 120 (250)
T ss_dssp HHHHTSS-CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcc-cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcc
Confidence 4444443 235689999999999999999998 77889999999 8887776531 1 2
Q ss_pred -------------ce-------------EEeCCCCCCC------CC--CCEEEeccccccCCh-------hHHHHHHHHH
Q 017595 251 -------------VK-------------HIGGNMFERI------PK--GDAILMKWILHNWDD-------EHCLTLLKNC 289 (369)
Q Consensus 251 -------------v~-------------~~~~d~~~~~------p~--~D~v~~~~vlh~~~d-------~~~~~~L~~~ 289 (369)
++ ++.+|+++.. +. .|+|++...+++..+ +....+++++
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSL 200 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHH
Confidence 67 9999998854 33 399999877766543 5567999999
Q ss_pred HHhCCCCCEEEEEecc
Q 017595 290 YEAIPENGKIIIIDRM 305 (369)
Q Consensus 290 ~~~L~pgG~lli~e~~ 305 (369)
+++|+|||+++++...
T Consensus 201 ~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 201 ASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHSCTTCEEEEEESS
T ss_pred HHhcCCCcEEEEeCcc
Confidence 9999999999986554
No 151
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.18 E-value=2.8e-11 Score=117.36 Aligned_cols=106 Identities=18% Similarity=0.142 Sum_probs=86.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC-CCCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE-RIPKG 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p~~ 265 (369)
.+.+++.+. .....+|||||||+|.++..+++ .+..+++++|.+.+++.+++ .++|+++.+|+.+ +++..
T Consensus 147 ~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 147 QRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 445666554 44568999999999999998877 57789999999546665543 1689999999998 66655
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEE
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIII 301 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli 301 (369)
|+|++..++|++.++.....+.++++.|+|||++++
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999898988878888889999999999999885
No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.17 E-value=4.8e-11 Score=105.00 Aligned_cols=99 Identities=15% Similarity=0.277 Sum_probs=73.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC------------CCCCceEEeCCCCC--C--CCCC--
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP------------SYRGVKHIGGNMFE--R--IPKG-- 265 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~rv~~~~~d~~~--~--~p~~-- 265 (369)
....+|||||||+|.++..+++.+|+..++++|+ +.+++.++ ...+|.++.+|+.+ + ++.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3567999999999999999999999999999999 77766432 24689999999986 3 4444
Q ss_pred CEEEeccccccCChh--H----HHHHHHHHHHhCCCCCEEEEEe
Q 017595 266 DAILMKWILHNWDDE--H----CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 266 D~v~~~~vlh~~~d~--~----~~~~L~~~~~~L~pgG~lli~e 303 (369)
|.|++...-.+.... . ...+|++++++|+|||+|++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 888764432211100 0 1379999999999999998864
No 153
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.17 E-value=2.4e-11 Score=113.36 Aligned_cols=105 Identities=18% Similarity=0.154 Sum_probs=83.7
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC------C-CCceEEeCCCCC-CCCCC-C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS------Y-RGVKHIGGNMFE-RIPKG-D 266 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~rv~~~~~d~~~-~~p~~-D 266 (369)
.+++.+. .....+|||||||+|.++..+++. +..+++++|...+++.+++ . ++++++.+|+.+ +.+.. |
T Consensus 41 ~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D 118 (348)
T 2y1w_A 41 AILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 118 (348)
T ss_dssp HHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCcee
Confidence 4445444 445689999999999999998876 5568999998445555432 1 689999999988 66654 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
+|++..+++|+..+.....+.++++.|+|||++++.
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999999999988777788899999999999999854
No 154
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.16 E-value=2.4e-11 Score=105.89 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=77.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCCCC--------CCCCE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFERI--------PKGDA 267 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~--------p~~D~ 267 (369)
.+..+|||||||+|..+..+++.+| +.+++++|. +.+++.+++ .++++++.+|+.+.+ ...|+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 3568999999999999999999998 789999999 877776543 247999999987621 12499
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
|++.... +....+++++.+.|+|||++++.+...
T Consensus 137 v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 137 IFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp EEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred EEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9876552 445689999999999999888776654
No 155
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.16 E-value=2.5e-11 Score=109.51 Aligned_cols=102 Identities=16% Similarity=0.231 Sum_probs=81.9
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCC-
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPK- 264 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~- 264 (369)
..++..++ +....+|||+|||+|.++..+++. .|..+++++|. +.+++.+++. ++++++.+|+.+.++.
T Consensus 102 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 180 (277)
T 1o54_A 102 SFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEK 180 (277)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCC
T ss_pred HHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCC
Confidence 45555555 667789999999999999999999 78899999998 8777766542 5799999999876554
Q ss_pred -CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 265 -GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 265 -~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.|+|++ +.++ ...+|+++.++|+|||++++...
T Consensus 181 ~~D~V~~-----~~~~--~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 181 DVDALFL-----DVPD--PWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SEEEEEE-----CCSC--GGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEE-----CCcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 399987 2333 34789999999999999999874
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.14 E-value=5.7e-11 Score=102.81 Aligned_cols=101 Identities=13% Similarity=0.108 Sum_probs=81.3
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCC-C--
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIP-K-- 264 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p-~-- 264 (369)
.+++.+. .....+|||||||+|.++..+++.. |+.+++++|. +.+++.+++. +++.++.+|+..+++ .
T Consensus 68 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 146 (215)
T 2yxe_A 68 MMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAP 146 (215)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCC
T ss_pred HHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCC
Confidence 4444444 5567899999999999999999987 6689999998 7777766542 579999999876554 2
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.|+|++..++|+++ +++.+.|+|||++++....
T Consensus 147 fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 147 YDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred eeEEEECCchHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 39999999999986 3678999999999987653
No 157
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.14 E-value=9.3e-11 Score=105.87 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=91.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC-CCCC-CEEEecccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER-IPKG-DAILMKWIL 274 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~-~p~~-D~v~~~~vl 274 (369)
++..+|||+|||+|.++..+++..+. +++++|. +.+++.+++. ++++++.+|+++. .+.. |+|++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p- 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV- 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC-
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc-
Confidence 35689999999999999999999877 8999999 8887766531 4699999999983 3333 99988543
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCccee
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVN 354 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 354 (369)
.....+++++.++|+|||++++.+...... ......+++.+.++++||++..
T Consensus 202 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------------------~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL-----------------------MPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG-----------------------TTTTTHHHHHHHHHHTTCEEEE
T ss_pred -----hhHHHHHHHHHHHCCCCeEEEEEEeecccc-----------------------ccccHHHHHHHHHHHcCCeeEE
Confidence 223578999999999999999988753110 0112466788899999998766
No 158
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.13 E-value=1.2e-10 Score=98.68 Aligned_cols=99 Identities=11% Similarity=-0.062 Sum_probs=79.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-C--CC-C-CCEEEeccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-R--IP-K-GDAILMKWI 273 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~--~p-~-~D~v~~~~v 273 (369)
...+|||+|||+|.++..++.. +..+++++|. +.+++.+++. ++++++.+|+.+ . ++ . .|+|++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 4579999999999999988774 4568999999 8888776542 589999999977 2 32 3 399999888
Q ss_pred cccCChhHHHHHHHHHHH--hCCCCCEEEEEeccC
Q 017595 274 LHNWDDEHCLTLLKNCYE--AIPENGKIIIIDRMP 306 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~--~L~pgG~lli~e~~~ 306 (369)
+|+. .++..++++.+.+ .|+|||++++.....
T Consensus 123 ~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 6653 4567899999999 999999999877654
No 159
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.13 E-value=7.5e-11 Score=101.69 Aligned_cols=99 Identities=13% Similarity=0.168 Sum_probs=79.4
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCCCC-C--C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFERIP-K--G 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p-~--~ 265 (369)
.+++.+. .....+|||||||+|.++..+++. ..+++++|. +.+++.+++ .++++++.+|+.+..+ . .
T Consensus 68 ~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 68 RMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 4444454 567789999999999999999998 578899998 777776653 2579999999988432 2 3
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|+|++..++|++++ .+.+.|+|||++++.-..
T Consensus 145 D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred cEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999999875 478899999999987654
No 160
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.13 E-value=3.7e-11 Score=104.65 Aligned_cols=98 Identities=9% Similarity=0.166 Sum_probs=78.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC---CCC-----C-CCE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE---RIP-----K-GDA 267 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~---~~p-----~-~D~ 267 (369)
+..+|||||||+|..+..+++..+ +.+++++|. +.+++.+++. ++++++.+|+.+ .++ . .|+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 568999999999999999999865 789999999 8888776642 479999999754 232 2 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
|++....+++ ....++++.+ +.|+|||+|++.+...
T Consensus 138 V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 9999888877 4445778888 9999999988766653
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.13 E-value=1.2e-10 Score=108.31 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=77.2
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC-------CCceEEeCCCCC-CCCC-C-
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY-------RGVKHIGGNMFE-RIPK-G- 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~rv~~~~~d~~~-~~p~-~- 265 (369)
.+.+.+. .....+|||||||+|.++..+++. +..+++++|...+++.+++. ++++++.+|+.+ +++. .
T Consensus 55 ~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 55 FIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 3334333 456689999999999999999887 44689999984466665431 689999999988 6663 3
Q ss_pred CEEEeccccccC-ChhHHHHHHHHHHHhCCCCCEEE
Q 017595 266 DAILMKWILHNW-DDEHCLTLLKNCYEAIPENGKII 300 (369)
Q Consensus 266 D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~ll 300 (369)
|+|++..+.+.+ .......+|+.+.+.|||||+++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 999987743322 12456689999999999999987
No 162
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.12 E-value=1e-10 Score=103.77 Aligned_cols=97 Identities=15% Similarity=0.106 Sum_probs=78.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC---CCC---CCCEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE---RIP---KGDAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~---~~p---~~D~v~ 269 (369)
.+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++. ++|+++.+|+.+ ..+ ..|+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 3568999999999999999999998 889999999 8777766542 589999999865 222 239998
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
+... .+....+|+++.++|||||+|++.+...
T Consensus 142 ~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 142 IDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp ECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred ECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 7543 3456689999999999999888876654
No 163
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=2.8e-10 Score=99.68 Aligned_cols=128 Identities=12% Similarity=0.076 Sum_probs=100.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCC-C--CCEEEecccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIP-K--GDAILMKWIL 274 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p-~--~D~v~~~~vl 274 (369)
+..+|||||||+|.++..+++..|..+++++|. +..++.|++. ++|+++.+|.++.++ . .|+|++..+.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 568999999999999999999999889999999 8887776542 579999999998544 2 4998876653
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCccee
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVN 354 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 354 (369)
.+-...+|....+.|+++++|++.-.. ..+.+++++.+.||.+++
T Consensus 101 ----g~lI~~IL~~~~~~L~~~~~lIlq~~~-------------------------------~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 101 ----GTLIRTILEEGAAKLAGVTKLILQPNI-------------------------------AAWQLREWSEQNNWLITS 145 (244)
T ss_dssp ----HHHHHHHHHHTGGGGTTCCEEEEEESS-------------------------------CHHHHHHHHHHHTEEEEE
T ss_pred ----hHHHHHHHHHHHHHhCCCCEEEEEcCC-------------------------------ChHHHHHHHHHCCCEEEE
Confidence 355778999999999999998876421 145688899999999866
Q ss_pred EEE---ecCceeEEEEe
Q 017595 355 YEC---FVCNFCIIEFI 368 (369)
Q Consensus 355 ~~~---~~~~~~vi~~~ 368 (369)
-.- ..-++-||.+.
T Consensus 146 E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 146 EAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEEEEEE
Confidence 543 23456676654
No 164
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.11 E-value=5.9e-11 Score=105.16 Aligned_cols=94 Identities=19% Similarity=0.366 Sum_probs=72.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC--------------CCCCceEEeCCCCCC----CCCC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP--------------SYRGVKHIGGNMFER----IPKG 265 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------~~~rv~~~~~d~~~~----~p~~ 265 (369)
+...+|||||||+|.++..+++.+|+.+++++|. +.+++.++ ..+++.++.+|+++. ++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4568999999999999999999999999999998 77766442 236899999999873 3333
Q ss_pred --CEEEeccccccCChhHH-----------HHHHHHHHHhCCCCCEEEEEe
Q 017595 266 --DAILMKWILHNWDDEHC-----------LTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 266 --D~v~~~~vlh~~~d~~~-----------~~~L~~~~~~L~pgG~lli~e 303 (369)
|.|++. ++++.. ..+++++.++|+|||+|++..
T Consensus 128 ~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 655532 333321 479999999999999999853
No 165
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.10 E-value=5.1e-11 Score=110.96 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=79.9
Q ss_pred HHHHHHhccCcCCcceEEEEcCC------hhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGG------LGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIP- 263 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G------~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p- 263 (369)
++.+++.+. .+..+||||||| +|..+..++++ +|+.+++++|+ +.+. ...++++++.+|+.+ +++
T Consensus 206 Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 206 YDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp HHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHHHHH
T ss_pred HHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccchhh
Confidence 344454443 356899999999 66666666665 69999999999 6653 235799999999988 544
Q ss_pred ------CC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 264 ------KG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 264 ------~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.. |+|++.. .|++ ++..+.|++++++|||||++++.|..
T Consensus 281 ~l~~~d~sFDlVisdg-sH~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 281 RIARRYGPFDIVIDDG-SHIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHCCEEEEEECS-CCCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhcccCCccEEEECC-cccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 23 9998864 4665 56678999999999999999998876
No 166
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.08 E-value=2.1e-10 Score=100.93 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=76.0
Q ss_pred cceEEEEcCChhHHHHHHHHh----CCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCCC--C---CC--CCEEEeccc
Q 017595 207 IKQLVDVGGGLGVTLNIITSR----YPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFER--I---PK--GDAILMKWI 273 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~--~---p~--~D~v~~~~v 273 (369)
..+|||||||+|..+..+++. .|+.+++++|+ +.+++.++. .++|+++.+|+.+. + +. .|+|++...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 479999999999999999997 78899999999 888777654 36899999999873 2 22 399887654
Q ss_pred cccCChhHHHHHHHHHHH-hCCCCCEEEEEec
Q 017595 274 LHNWDDEHCLTLLKNCYE-AIPENGKIIIIDR 304 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~-~L~pgG~lli~e~ 304 (369)
|. +...+|+++.+ .|||||+|++.+.
T Consensus 162 -~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 -HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp -CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred -hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 42 35679999997 9999999998775
No 167
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.08 E-value=4.5e-11 Score=105.70 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=78.1
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---C-----CC-CCE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---I-----PK-GDA 267 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~-----p~-~D~ 267 (369)
+..+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++|+++.+|+.+. . +. .|+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 467999999999999999999986 789999999 7766655432 5899999999762 2 23 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCC
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMV 308 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~ 308 (369)
|++... ......+|+++.+.|+|||+|++.+.....
T Consensus 140 V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 140 IFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 987654 345567999999999999999987776543
No 168
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.08 E-value=6.2e-11 Score=104.08 Aligned_cols=97 Identities=19% Similarity=0.271 Sum_probs=78.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCC----CC-CEEEec
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIP----KG-DAILMK 271 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p----~~-D~v~~~ 271 (369)
.+..+|||||||+|..+..+++.+|+.+++++|. +.+++.+++. ++++++.+|+.+..+ .. |+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 3568999999999999999999889999999999 8887766542 489999999987433 33 999865
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
.. .+....+++++.+.|+|||+|++.+...
T Consensus 150 ~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 150 AA-----KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp TT-----SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred Cc-----HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 43 2445689999999999999998766544
No 169
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.07 E-value=1.2e-10 Score=108.53 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=75.6
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC-CCCC-C-CEEEecccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE-RIPK-G-DAILMKWIL 274 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~-D~v~~~~vl 274 (369)
....+|||||||+|.++..++++ +..+++++|..++++.+++ .++++++.+|+.+ ++|. . |+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 35689999999999999999987 5668999998556665543 2569999999998 6764 3 999987765
Q ss_pred ccC-ChhHHHHHHHHHHHhCCCCCEEEE
Q 017595 275 HNW-DDEHCLTLLKNCYEAIPENGKIII 301 (369)
Q Consensus 275 h~~-~d~~~~~~L~~~~~~L~pgG~lli 301 (369)
+++ ..+....+++.+.++|||||+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 544 224566899999999999999873
No 170
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=1.1e-10 Score=106.35 Aligned_cols=98 Identities=12% Similarity=0.187 Sum_probs=78.2
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC---CCC-C-CCEEEecccc
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE---RIP-K-GDAILMKWIL 274 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~---~~p-~-~D~v~~~~vl 274 (369)
..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .+|++++.+|..+ ..+ . .|+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 35999999999999999999999999999999 888887654 2689999999876 333 2 3999986544
Q ss_pred ccCChhH--HHHHHHHHHHhCCCCCEEEEEec
Q 017595 275 HNWDDEH--CLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 275 h~~~d~~--~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+...... ...+++.++++|+|||++++.-.
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 4322222 25899999999999999988765
No 171
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=4.9e-11 Score=103.98 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=77.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---CC-----C-CCE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---IP-----K-GDA 267 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~p-----~-~D~ 267 (369)
...+|||||||+|..+..+++.+| +.+++++|. +.+++.+++. ++++++.+|+.+. .+ . .|+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 467999999999999999999988 789999999 7777766532 5799999998652 11 3 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
|++... .+....+++++.+.|+|||+|++.+...+
T Consensus 144 v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 144 IYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 986543 34567899999999999999998777643
No 172
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.07 E-value=5.1e-10 Score=95.18 Aligned_cols=108 Identities=14% Similarity=0.246 Sum_probs=79.1
Q ss_pred hHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCCCCCC--------
Q 017595 191 SIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFERI-------- 262 (369)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~~-------- 262 (369)
.+.+.++.+.+..+....+|||+|||+|.++..++++ ..+++++|+... ...++++++.+|+.+..
T Consensus 10 ~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~ 83 (191)
T 3dou_A 10 AFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRA 83 (191)
T ss_dssp HHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHH
Confidence 3445677777764567789999999999999999988 678999998432 23468999999998731
Q ss_pred ------CCCCEEEeccccccCC---------hhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 263 ------PKGDAILMKWILHNWD---------DEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 263 ------p~~D~v~~~~vlh~~~---------d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+..|+|++........ -+.+..+|+.+.+.|||||++++...
T Consensus 84 ~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 84 LREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 2239999864322110 12245789999999999999987654
No 173
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.07 E-value=1.2e-10 Score=102.35 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=81.2
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCCCCC--
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFERIPK-- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p~-- 264 (369)
...+++.++ .....+|||||||+|.++..+++..+ .+++++|. +.+++.+++ .++++++.+|+..+++.
T Consensus 80 ~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 80 VAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 345555554 56678999999999999999999988 78999998 777776654 25699999998555543
Q ss_pred -CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 -GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 -~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.|+|++..+++++++ ++.+.|+|||++++.-..
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 399999999998854 578899999999987653
No 174
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.06 E-value=1.7e-10 Score=104.76 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=74.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCCC--C-C-CCEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFERI--P-K-GDAI 268 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~--p-~-~D~v 268 (369)
..+.+|||||||+|.++..+++..+..+++++|+ +.+++.+++ .+|++++.+|..+.+ + . .|+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 3568999999999999999999878889999999 888876543 358999999998732 2 2 3999
Q ss_pred EeccccccCChhHH--HHHHHHHHHhCCCCCEEEEEec
Q 017595 269 LMKWILHNWDDEHC--LTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 269 ~~~~vlh~~~d~~~--~~~L~~~~~~L~pgG~lli~e~ 304 (369)
++...-+..+.... ..+++.++++|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 98655433332222 6799999999999999998754
No 175
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.06 E-value=1.7e-10 Score=101.00 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=79.6
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----CCceEEeCCCCCCCC--CC-C
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----RGVKHIGGNMFERIP--KG-D 266 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~rv~~~~~d~~~~~p--~~-D 266 (369)
..+++.+. .....+|||||||+|.++..+++.. .+++++|. +.+++.+++. .+++++.+|+.+..+ .. |
T Consensus 60 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD 136 (231)
T 1vbf_A 60 IFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYD 136 (231)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEE
T ss_pred HHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCcc
Confidence 34555554 5567899999999999999999987 68899998 7777766532 379999999987433 23 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+|++..++|++++ ++.+.|+|||++++....
T Consensus 137 ~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 137 RVVVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EEEESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred EEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 9999999999863 478899999999998654
No 176
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.06 E-value=2e-10 Score=102.59 Aligned_cols=100 Identities=12% Similarity=0.230 Sum_probs=76.6
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-------C---CCceEEeCCCCCC--------CCC
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-------Y---RGVKHIGGNMFER--------IPK 264 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~---~rv~~~~~d~~~~--------~p~ 264 (369)
.....+|||+|||+|.++..++.++|+.+++++|+ +.+++.+++ . ++++++.+|+.+. ++.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 45668999999999999999999999999999999 777765432 1 3699999999874 333
Q ss_pred -C-CEEEecccccc----------------CChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 265 -G-DAILMKWILHN----------------WDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 265 -~-D~v~~~~vlh~----------------~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
. |+|++.-.++. ........+++.+.+.|+|||+++++-
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 99999743322 222335789999999999999998854
No 177
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.05 E-value=4.2e-10 Score=95.74 Aligned_cols=105 Identities=18% Similarity=0.243 Sum_probs=77.0
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC---------CeEEEcchhHHHHhCCCCCCceEE-eCCCCC-C---
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH---------IEGVNFDLPHVIQNAPSYRGVKHI-GGNMFE-R--- 261 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~---------~~~~~~D~~~~~~~a~~~~rv~~~-~~d~~~-~--- 261 (369)
++.+.+..+....+|||||||+|.++..++++++. .+++++|+... ...++++++ .+|+.+ +
T Consensus 12 ~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~----~~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 12 EVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI----FPLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp HHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC----CCCTTCEEECSCCTTSHHHHH
T ss_pred HHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc----ccCCCCeEEEeccCCCHHHHH
Confidence 44444543456789999999999999999999765 79999998442 123678999 999876 2
Q ss_pred -----CCC-C-CEEEecccccc----CChhH-----HHHHHHHHHHhCCCCCEEEEEec
Q 017595 262 -----IPK-G-DAILMKWILHN----WDDEH-----CLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 262 -----~p~-~-D~v~~~~vlh~----~~d~~-----~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
++. . |+|++...+|. ..+.. ...++++++++|+|||++++...
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 232 3 99998655443 12211 14789999999999999998765
No 178
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.05 E-value=1.6e-10 Score=108.85 Aligned_cols=101 Identities=15% Similarity=0.138 Sum_probs=78.5
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC-CCCCC-CEEEecccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE-RIPKG-DAILMKWIL 274 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p~~-D~v~~~~vl 274 (369)
.....+|||||||+|.++..++++. ..+++++|...+++.+++ .++++++.+|+.+ ++++. |+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4567899999999999999999884 348888888655554443 2569999999988 66644 999997777
Q ss_pred ccCCh-hHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 275 HNWDD-EHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 275 h~~~d-~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|++.. .....+++.+++.|+|||++++.+..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 76543 34667999999999999999876553
No 179
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.05 E-value=2.2e-10 Score=100.14 Aligned_cols=131 Identities=11% Similarity=0.052 Sum_probs=99.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCCCC-C-CCEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFERIP-K-GDAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~~p-~-~D~v~~~~vlh~ 276 (369)
..+.+|||||||.|-++..+....|..+++++|+ +.+++.++.. .+.++...|+....| . +|++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 3578999999999999999999999999999999 8888876542 457899999988444 3 399999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeE
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 355 (369)
+.++.....+ ++..+|+|+|.++..+.-.=..+.+ . |. ....+.|.+++.+.|..+.+.
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~--------g----m~-------~~Y~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSK--------G----MF-------QNYSQSFESQARERSCRIQRL 269 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEECC---------------C----HH-------HHHHHHHHHHHHHHTCCEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCc--------c----hh-------hHHHHHHHHHHHhcCCceeee
Confidence 9777666677 8999999999888777611111110 1 11 123678999999999854443
No 180
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.04 E-value=2.6e-10 Score=105.83 Aligned_cols=104 Identities=15% Similarity=0.174 Sum_probs=78.6
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCC-----------------CCCceEE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPS-----------------YRGVKHI 254 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-----------------~~rv~~~ 254 (369)
...++..+. .....+|||+|||+|.++..+++. .|+.+++++|. +.+++.+++ .++++++
T Consensus 94 ~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 94 INMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 334555554 566789999999999999999998 58889999999 777766543 2589999
Q ss_pred eCCCCCC---CCC--CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 255 GGNMFER---IPK--GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 255 ~~d~~~~---~p~--~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.+|+.+. ++. .|+|++... . + ..+++++.+.|+|||++++....
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~-~----~--~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDML-N----P--HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ESCTTCCC-------EEEEEECSS-S----T--TTTHHHHGGGEEEEEEEEEEESS
T ss_pred ECChHHcccccCCCCeeEEEECCC-C----H--HHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999873 343 299987432 1 1 23789999999999999987763
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.04 E-value=1.3e-10 Score=101.96 Aligned_cols=96 Identities=9% Similarity=0.142 Sum_probs=78.9
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---C--CCC-CEEEec
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---I--PKG-DAILMK 271 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~--p~~-D~v~~~ 271 (369)
...+|||||||+|..+..+++.+|+.+++++|. +.+++.+++. +++.++.+|+.+. . +.. |+|++.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 467999999999999999999999999999999 8877766542 5799999999772 1 233 999987
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
...+ ....+|+++.+.|+|||++++.+...
T Consensus 134 ~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 134 AAKG-----QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp GGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred CCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 7654 34688999999999999999876544
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.04 E-value=2.3e-10 Score=105.26 Aligned_cols=101 Identities=14% Similarity=0.282 Sum_probs=80.6
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCCCC--C-
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFERIP--K- 264 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p--~- 264 (369)
.+++.+. .....+|||||||+|.++..+++..+ +.+++++|+ +.+++.+++ .++++++.+|+.+..+ .
T Consensus 66 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 144 (317)
T 1dl5_A 66 LFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP 144 (317)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCC
Confidence 4445454 55678999999999999999999987 478999998 777776653 2569999999987332 2
Q ss_pred CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 265 GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.|+|++..++|+++ +++.+.|||||++++....
T Consensus 145 fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 145 YDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred eEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 39999999999986 4678899999999997543
No 183
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.04 E-value=4.1e-10 Score=100.96 Aligned_cols=93 Identities=18% Similarity=0.282 Sum_probs=77.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-CCCceEEeCCCCC-CCCCC--CEEEeccccccCCh
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-YRGVKHIGGNMFE-RIPKG--DAILMKWILHNWDD 279 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d 279 (369)
....+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .+++.++.+|+.+ +++.+ |+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 3567999999999999999999988889999999 887777654 3678999999987 55543 999986653
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 280 EHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 280 ~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
..+++++++|+|||++++..+..
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 24889999999999999987654
No 184
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.03 E-value=4.6e-10 Score=105.61 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=80.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCC-CC-CC-CEEEecccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFER-IP-KG-DAILMKWILHN 276 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~-~p-~~-D~v~~~~vlh~ 276 (369)
...+|||+|||+|.++..+++. +.+++++|. +.+++.+++. .+++++.+|+.+. .+ .. |+|++...+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 4579999999999999999988 468999998 7777766542 2589999999983 43 23 99999999997
Q ss_pred ---CChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 277 ---WDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 277 ---~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
...+....+++++.+.|+|||+++|+..
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 3347788999999999999999999754
No 185
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.02 E-value=1.9e-10 Score=96.35 Aligned_cols=100 Identities=9% Similarity=0.003 Sum_probs=76.6
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---CCC-CCEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---IPK-GDAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~p~-~D~v~~~ 271 (369)
.....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. ++++++.+|+.+. .+. .|+|++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLD 107 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEEC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEEC
Confidence 345679999999999999999987 6679999999 8887766532 4799999998762 223 3999998
Q ss_pred cccccCChhHHHHHHHHHH--HhCCCCCEEEEEeccCC
Q 017595 272 WILHNWDDEHCLTLLKNCY--EAIPENGKIIIIDRMPM 307 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~--~~L~pgG~lli~e~~~~ 307 (369)
..++. .....+++.+. ++|+|||++++......
T Consensus 108 ~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 108 PPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 77643 33456677776 99999999998776543
No 186
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.02 E-value=5.4e-10 Score=101.11 Aligned_cols=94 Identities=17% Similarity=0.167 Sum_probs=74.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCC-CC---CEEEec--
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIP-KG---DAILMK-- 271 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p-~~---D~v~~~-- 271 (369)
...+|||+|||+|.++..++.. |+.+++++|+ +.+++.+++. ++++++.+|++++++ .. |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 4579999999999999999999 9999999999 8888776542 369999999998543 45 999986
Q ss_pred ----------cccccCCh------hHHHHHHHHHH-HhCCCCCEEEE
Q 017595 272 ----------WILHNWDD------EHCLTLLKNCY-EAIPENGKIII 301 (369)
Q Consensus 272 ----------~vlh~~~d------~~~~~~L~~~~-~~L~pgG~lli 301 (369)
.+. |.|. ++...+++++. +.|+|||++++
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 233 2222 11237899999 99999999886
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.00 E-value=4.9e-10 Score=103.59 Aligned_cols=95 Identities=20% Similarity=0.273 Sum_probs=73.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC-CCC-CC-CEEEeccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE-RIP-KG-DAILMKWILH 275 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~-D~v~~~~vlh 275 (369)
...+|||||||+|.++..+++. +..+++++|...+++.+++ .++++++.+|+.+ ++| +. |+|++..+.+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 4579999999999999998876 4458899998546665443 2579999999988 666 33 9999886655
Q ss_pred cCC-hhHHHHHHHHHHHhCCCCCEEEE
Q 017595 276 NWD-DEHCLTLLKNCYEAIPENGKIII 301 (369)
Q Consensus 276 ~~~-d~~~~~~L~~~~~~L~pgG~lli 301 (369)
++. ......+++.+.+.|+|||+++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 442 24456889999999999999873
No 188
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.00 E-value=1.1e-09 Score=98.66 Aligned_cols=104 Identities=10% Similarity=0.178 Sum_probs=81.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-CCCCeEEEcch-hHHHHhCCC---------CCCceEEeCCCCC-C
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDL-PHVIQNAPS---------YRGVKHIGGNMFE-R 261 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~---------~~rv~~~~~d~~~-~ 261 (369)
...++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.+++ .++++++.+|+.+ +
T Consensus 88 ~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 88 AAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 345566565 667789999999999999999986 57889999999 777765543 2589999999987 4
Q ss_pred CCC-C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 262 IPK-G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 262 ~p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
++. . |+|++ +.++. ..+|+++.++|+|||++++..+.
T Consensus 167 ~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAP--WEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CCTTCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCCceeEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeCC
Confidence 543 3 99987 23322 37899999999999999998753
No 189
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.00 E-value=1.8e-09 Score=97.49 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=71.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch--hHHHHhCCC---------C-------CCceEEeCCCCCC---C-
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL--PHVIQNAPS---------Y-------RGVKHIGGNMFER---I- 262 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a~~---------~-------~rv~~~~~d~~~~---~- 262 (369)
....+|||||||+|.++..+++.. ..+++++|. +.+++.++. . ++++++..|..+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 355799999999999999888764 347888888 455554321 1 3788887665442 2
Q ss_pred ----CC-CCEEEeccccccCChhHHHHHHHHHHHhCC---C--CCEEEEE
Q 017595 263 ----PK-GDAILMKWILHNWDDEHCLTLLKNCYEAIP---E--NGKIIII 302 (369)
Q Consensus 263 ----p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~---p--gG~lli~ 302 (369)
+. .|+|++..++|+. +....+++.+.++|+ | ||+++++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 22 3999999999986 557789999999999 9 9988774
No 190
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.99 E-value=2.1e-10 Score=99.02 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=76.9
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC--CCCC-CCEEEeccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE--RIPK-GDAILMKWI 273 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~--~~p~-~D~v~~~~v 273 (369)
...+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++++++.+|..+ +... .|+|++...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 135 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDCD 135 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEETT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcCC
Confidence 457999999999999999999988 789999999 8887776542 479999999865 2222 588887632
Q ss_pred cccCChhHHHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 274 LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
......+++++++.|+|||++++.+....
T Consensus 136 -----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 136 -----VFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp -----TSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred -----hhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 24456899999999999999988665543
No 191
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.99 E-value=1.9e-10 Score=100.21 Aligned_cols=95 Identities=9% Similarity=0.132 Sum_probs=74.9
Q ss_pred cceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC--------CCceEEeCCCCC---CC-CCC-CEEEec
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY--------RGVKHIGGNMFE---RI-PKG-DAILMK 271 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~--------~rv~~~~~d~~~---~~-p~~-D~v~~~ 271 (369)
..+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++++++.+|+.+ .+ +.. |+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 34999999999999999999875 789999999 8877766531 489999999876 23 233 999876
Q ss_pred cccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 WILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 ~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
... .....+++++.+.|+|||++++.+...
T Consensus 137 ~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 137 VSP-----MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp CCT-----TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CcH-----HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 543 334578999999999999888755543
No 192
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.97 E-value=3.8e-10 Score=95.11 Aligned_cols=99 Identities=8% Similarity=-0.011 Sum_probs=74.9
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCC------CCC-CEE
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERI------PKG-DAI 268 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~------p~~-D~v 268 (369)
.....+|||+|||+|.++..+++ .+..+++++|. +.+++.+++. ++++++.+|+.+.. +.. |+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLV 120 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEE
Confidence 34567999999999999999887 45678999999 8888776542 47999999997721 233 999
Q ss_pred EeccccccCChhHHHHHHHHH--HHhCCCCCEEEEEeccC
Q 017595 269 LMKWILHNWDDEHCLTLLKNC--YEAIPENGKIIIIDRMP 306 (369)
Q Consensus 269 ~~~~vlh~~~d~~~~~~L~~~--~~~L~pgG~lli~e~~~ 306 (369)
++...++... ...+++.+ .++|+|||++++.....
T Consensus 121 ~~~~~~~~~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 121 LLDPPYAKQE---IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EECCCGGGCC---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECCCCCchh---HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 9988865332 23556666 88899999998876544
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=4.7e-10 Score=98.85 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=76.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---C----------
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---I---------- 262 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~---------- 262 (369)
....+|||||||+|..+..+++.+| ..+++++|. +.+++.+++. ++++++.+|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 3567999999999999999999987 689999999 8777766542 4599999998652 1
Q ss_pred -----C-C-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 263 -----P-K-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 263 -----p-~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
+ . .|+|++.... +....+++++.+.|+|||++++.+...
T Consensus 139 ~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 1 3 3999887543 445688999999999999999876543
No 194
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.96 E-value=4e-10 Score=99.85 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=76.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC--C-C------CC-CC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE--R-I------PK-GD 266 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~--~-~------p~-~D 266 (369)
+..+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++|+++.+|..+ + + +. .|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 467999999999999999999987 789999999 8877766532 579999999865 2 2 23 39
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
+|++... ......+++.+.+.|+|||+|++.+...
T Consensus 159 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 159 FIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp EEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 9987643 2345789999999999999988766543
No 195
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.95 E-value=2.2e-09 Score=95.89 Aligned_cols=106 Identities=11% Similarity=0.029 Sum_probs=74.9
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC--C------CceEE--eCCCCC-CC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY--R------GVKHI--GGNMFE-RI 262 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~--~------rv~~~--~~d~~~-~~ 262 (369)
...+.+. ..+....+|||||||+|.++..++++ .+++++|+..+...++.. . ++.++ .+|+.+ +
T Consensus 63 L~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~- 137 (265)
T 2oxt_A 63 LAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP- 137 (265)
T ss_dssp HHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-
T ss_pred HHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC-
Confidence 3445554 22556789999999999999999887 579999994343333221 2 68999 899987 4
Q ss_pred CC-CCEEEeccccccCChhH-----HHHHHHHHHHhCCCCC--EEEEEecc
Q 017595 263 PK-GDAILMKWILHNWDDEH-----CLTLLKNCYEAIPENG--KIIIIDRM 305 (369)
Q Consensus 263 p~-~D~v~~~~vlh~~~d~~-----~~~~L~~~~~~L~pgG--~lli~e~~ 305 (369)
+. .|+|++... ++.+... ...+|+.++++|+||| .+++....
T Consensus 138 ~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 33 399999876 4433221 1248999999999999 88885554
No 196
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.94 E-value=3.5e-10 Score=98.78 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=77.1
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---CC-----C-CC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---IP-----K-GD 266 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~p-----~-~D 266 (369)
....+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++++++.+|+.+. ++ . .|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 3568999999999999999999987 789999999 7777766532 5899999998652 21 3 39
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
+|++... ......+++++.+.|+|||++++.+...
T Consensus 148 ~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 148 VAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 9988543 2445689999999999999999877653
No 197
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.94 E-value=6.6e-10 Score=97.04 Aligned_cols=93 Identities=13% Similarity=0.168 Sum_probs=75.8
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCC------CCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCCCCC-
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYP------HIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFERIPK- 264 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p------~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~p~- 264 (369)
.....+|||||||+|.++..+++..+ ..+++++|. +.+++.+++ .++++++.+|..++++.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 44567999999999999999998765 368999998 777776653 25899999999875543
Q ss_pred --CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 265 --GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 265 --~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.|+|++...+++++ +++.+.|+|||++++.-.
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 39999999999874 567889999999998754
No 198
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.94 E-value=2.5e-10 Score=97.88 Aligned_cols=97 Identities=12% Similarity=0.036 Sum_probs=75.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--------CCceEEeCCCCC-C--C--CC-CCEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--------RGVKHIGGNMFE-R--I--PK-GDAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~rv~~~~~d~~~-~--~--p~-~D~v~~ 270 (369)
...+|||+|||+|.++..++.+.. .+++++|. +.+++.+++. ++++++.+|+.+ . . .. .|+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 357999999999999999777753 58999999 8888766542 589999999876 2 1 23 599999
Q ss_pred ccccccCChhHHHHHHHHH--HHhCCCCCEEEEEeccC
Q 017595 271 KWILHNWDDEHCLTLLKNC--YEAIPENGKIIIIDRMP 306 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~--~~~L~pgG~lli~e~~~ 306 (369)
...+| . .....+++.+ .++|+|||++++.....
T Consensus 132 ~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 88855 3 4556788888 56799999998876543
No 199
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.93 E-value=3.3e-10 Score=93.97 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=72.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----C-CceEEeCCCCCCCC-------CCCEEEecc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----R-GVKHIGGNMFERIP-------KGDAILMKW 272 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~-rv~~~~~d~~~~~p-------~~D~v~~~~ 272 (369)
...+|||+|||+|.++..+++..++ ++++|. +.+++.+++. . +++++.+|+.+..+ ..|+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 4579999999999999999998776 999999 8887776542 2 79999999876211 239999998
Q ss_pred ccccCChhHHHHHHHHHH--HhCCCCCEEEEEeccC
Q 017595 273 ILHNWDDEHCLTLLKNCY--EAIPENGKIIIIDRMP 306 (369)
Q Consensus 273 vlh~~~d~~~~~~L~~~~--~~L~pgG~lli~e~~~ 306 (369)
++| -..+ .+++.+. ++|+|||++++.....
T Consensus 119 ~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 876 2223 3455555 9999999998876644
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.92 E-value=4.7e-10 Score=101.47 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=77.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCCC---CCCC-CEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFER---IPKG-DAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p~~-D~v~ 269 (369)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|..+. .+.. |+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 3568999999999999999998888889999999 888776542 36899999998762 2333 9999
Q ss_pred eccccccCChhHH--HHHHHHHHHhCCCCCEEEEEe
Q 017595 270 MKWILHNWDDEHC--LTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 270 ~~~vlh~~~d~~~--~~~L~~~~~~L~pgG~lli~e 303 (369)
+....+..+.+.. ..+++.++++|+|||++++..
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 8654443333322 689999999999999998864
No 201
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.92 E-value=2.9e-09 Score=97.14 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=71.5
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-----hHHHHhC--CCC--CCceEEeC-CCCC-CCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-----PHVIQNA--PSY--RGVKHIGG-NMFE-RIP 263 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a--~~~--~rv~~~~~-d~~~-~~p 263 (369)
..+.+. ..+....+|||||||+|.++..++++ .+++++|. +..++.. +.. ++|.++.+ |+.. +..
T Consensus 72 ~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~ 147 (305)
T 2p41_A 72 RWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPE 147 (305)
T ss_dssp HHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCC
T ss_pred HHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcC
Confidence 344444 32455689999999999999999987 36777776 3222222 112 57999999 9887 333
Q ss_pred CCCEEEeccccc---cCChhH-HHHHHHHHHHhCCCCCEEEEEe
Q 017595 264 KGDAILMKWILH---NWDDEH-CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 264 ~~D~v~~~~vlh---~~~d~~-~~~~L~~~~~~L~pgG~lli~e 303 (369)
..|+|++...++ +..+.. ...+|+.++++|||||.+++..
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 349999976653 222222 2268999999999999888743
No 202
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.92 E-value=3e-09 Score=93.86 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=78.5
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCC-CC-C
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERI-PK-G 265 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~-p~-~ 265 (369)
.++..++ .....+|||+|||+|.++..+++. ..+++++|. +..++.+++. ++++++.+|+.+.. +. .
T Consensus 82 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 4445454 566789999999999999999998 678999998 7777765531 68999999998854 43 3
Q ss_pred -CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 266 -DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 266 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|+|++. .+ +...+++++.+.|+|||++++....
T Consensus 159 ~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 159 FHAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp BSEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999872 33 2347899999999999999998753
No 203
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.91 E-value=2.4e-09 Score=99.96 Aligned_cols=109 Identities=15% Similarity=0.078 Sum_probs=83.2
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-CCC-C
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-RIP-K 264 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~~p-~ 264 (369)
..++.... +.+..+|||+|||+|.++..++... |+.+++++|+ +.+++.++.. ++++++.+|+.+ +.+ .
T Consensus 193 ~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~ 271 (354)
T 3tma_A 193 QALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFP 271 (354)
T ss_dssp HHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCC
T ss_pred HHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccC
Confidence 34445444 6777899999999999999999988 8899999999 8888776542 379999999988 433 2
Q ss_pred C-CEEEeccccccCCh--h----HHHHHHHHHHHhCCCCCEEEEEec
Q 017595 265 G-DAILMKWILHNWDD--E----HCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 265 ~-D~v~~~~vlh~~~d--~----~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
. |+|++......... . ....+++.+.+.|+|||++++...
T Consensus 272 ~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 272 EVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 99998655432111 1 136899999999999999998753
No 204
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.91 E-value=2.7e-09 Score=95.89 Aligned_cols=106 Identities=15% Similarity=0.066 Sum_probs=74.6
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCC--C------CceEE--eCCCCC-CC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSY--R------GVKHI--GGNMFE-RI 262 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~--~------rv~~~--~~d~~~-~~ 262 (369)
+..+.+. ..+....+|||||||+|.++..++++ .+++++|+..+...+++. . ++.++ .+|+.+ +
T Consensus 71 L~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~- 145 (276)
T 2wa2_A 71 LAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME- 145 (276)
T ss_dssp HHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-
T ss_pred HHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-
Confidence 4455554 22456789999999999999999987 579999994353333221 2 68999 899876 4
Q ss_pred CC-CCEEEeccccccCChhH-----HHHHHHHHHHhCCCCC--EEEEEecc
Q 017595 263 PK-GDAILMKWILHNWDDEH-----CLTLLKNCYEAIPENG--KIIIIDRM 305 (369)
Q Consensus 263 p~-~D~v~~~~vlh~~~d~~-----~~~~L~~~~~~L~pgG--~lli~e~~ 305 (369)
+. .|+|++... +..+... ...+|+.+.++|+||| .+++....
T Consensus 146 ~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 33 399999877 4432211 1247999999999999 88885544
No 205
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.91 E-value=6.5e-10 Score=102.66 Aligned_cols=99 Identities=13% Similarity=0.104 Sum_probs=76.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCC---CCCC--CCEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFE---RIPK--GDAI 268 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~---~~p~--~D~v 268 (369)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|+.+ ..+. .|+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888889999999 888776543 2589999999865 2332 3999
Q ss_pred EeccccccCChhH--HHHHHHHHHHhCCCCCEEEEEe
Q 017595 269 LMKWILHNWDDEH--CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 269 ~~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~lli~e 303 (369)
++....+..+.+. ...++++++++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9865422211121 3689999999999999998863
No 206
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.90 E-value=2.3e-09 Score=98.45 Aligned_cols=103 Identities=13% Similarity=0.112 Sum_probs=77.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-C-CCCC-CEEEec-
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-R-IPKG-DAILMK- 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~-~p~~-D~v~~~- 271 (369)
.....+|||+|||+|..+..+++..+ ..+++++|. +..++.+++. ++++++.+|+.+ + .+.. |+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 55668999999999999999999975 478999999 7777765532 579999999987 3 2333 999873
Q ss_pred -----cccccCC-------hhH-------HHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 -----WILHNWD-------DEH-------CLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 -----~vlh~~~-------d~~-------~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
.++++.+ .++ ..++|+++.+.|||||++++.....
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 3344332 111 2589999999999999998876543
No 207
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=8.2e-10 Score=99.42 Aligned_cols=98 Identities=16% Similarity=0.134 Sum_probs=75.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCCC---CCCC-CEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFER---IPKG-DAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p~~-D~v~~ 270 (369)
.+.+|||||||+|.++..+++..+..+++++|+ +.+++.+++ .+|++++.+|..+. .+.. |+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 568999999999999999998877789999999 888776542 36899999998762 2233 99998
Q ss_pred ccccccCChhH--HHHHHHHHHHhCCCCCEEEEEe
Q 017595 271 KWILHNWDDEH--CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 271 ~~vlh~~~d~~--~~~~L~~~~~~L~pgG~lli~e 303 (369)
....+..+.+. ...++++++++|+|||.+++..
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 65443322111 2579999999999999998764
No 208
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.90 E-value=1.5e-09 Score=94.61 Aligned_cols=94 Identities=18% Similarity=0.178 Sum_probs=76.1
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-----CCCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCCC----
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-----PHIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFERI---- 262 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~---- 262 (369)
.....+|||||||+|.++..+++.. |+.+++++|. +.+++.+++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4456899999999999999999986 5789999999 777776543 257999999998743
Q ss_pred C--C-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 263 P--K-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 263 p--~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+ . .|+|++...++++ ++++.+.|+|||++++.-..
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 2 2 3999999999876 36778999999999987653
No 209
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.89 E-value=7.5e-10 Score=101.05 Aligned_cols=101 Identities=18% Similarity=0.139 Sum_probs=75.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCC--CC-CC-CCEEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFE--RI-PK-GDAIL 269 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~--~~-p~-~D~v~ 269 (369)
....+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ +. +. .|+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888889999999 888776543 3689999999865 22 23 39999
Q ss_pred eccccccCChh--HHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 270 MKWILHNWDDE--HCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 270 ~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+....+..+.. ....++++++++|+|||++++....
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 86544322211 1347899999999999999886643
No 210
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.89 E-value=7.1e-10 Score=101.77 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=77.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCC---CCCC-CEEE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFER---IPKG-DAIL 269 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~---~p~~-D~v~ 269 (369)
...+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .++++++.+|..+. .+.. |+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 568999999999999999999888889999999 777775542 36899999998762 2333 9999
Q ss_pred ecccccc---CChhH--HHHHHHHHHHhCCCCCEEEEEec
Q 017595 270 MKWILHN---WDDEH--CLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 270 ~~~vlh~---~~d~~--~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+....|. -+.+. ...++++++++|+|||++++...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9766554 21111 36899999999999999998643
No 211
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.88 E-value=4.8e-11 Score=105.25 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=93.8
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCC-CCEEEeccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPK-GDAILMKWILH 275 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~-~D~v~~~~vlh 275 (369)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.++.. ++++++.+|+.+ +.+. .|+|++..++|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 46899999999999999999875 78999999 8887766542 479999999987 4222 39999999999
Q ss_pred cCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeE
Q 017595 276 NWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNY 355 (369)
Q Consensus 276 ~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 355 (369)
+.++. ...+.+++++|+|||++++.... ...... . . + --+....+++..++...|.-.++.
T Consensus 156 ~~~~~--~~~~~~~~~~L~pgG~~i~~~~~-~~~~~~--------~-----~--~-lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 156 GPDYA--TAETFDIRTMMSPDGFEIFRLSK-KITNNI--------V-----Y--F-LPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp SGGGG--GSSSBCTTTSCSSCHHHHHHHHH-HHCSCE--------E-----E--E-EETTBCHHHHHHTTCTTCCEEEEE
T ss_pred Ccchh--hhHHHHHHhhcCCcceeHHHHHH-hhCCce--------E-----E--E-CCCCCCHHHHHHHhccCCCEEEEe
Confidence 87543 34677899999999985542211 000000 0 0 0 012235677778887777666665
Q ss_pred EEecCce
Q 017595 356 ECFVCNF 362 (369)
Q Consensus 356 ~~~~~~~ 362 (369)
....+..
T Consensus 217 ~~~~~~~ 223 (241)
T 3gdh_A 217 NFLNNKL 223 (241)
T ss_dssp EEETTEE
T ss_pred hhhcCcc
Confidence 5555443
No 212
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.88 E-value=1.1e-09 Score=98.96 Aligned_cols=97 Identities=19% Similarity=0.173 Sum_probs=73.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC----------------CCCCceEEeCCCCCC--CCC-C
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP----------------SYRGVKHIGGNMFER--IPK-G 265 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~----------------~~~rv~~~~~d~~~~--~p~-~ 265 (369)
...+|||||||+|.++..+++. |..+++++|+ +.+++.++ ..++++++.+|..+. .+. .
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 4689999999999999999998 8889999999 87776543 246899999998652 133 3
Q ss_pred CEEEeccccccCChhH--HHHHHHHHHHhCCCCCEEEEEe
Q 017595 266 DAILMKWILHNWDDEH--CLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~lli~e 303 (369)
|+|++....+..+.+. ...++++++++|+|||++++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865543222222 2678999999999999998864
No 213
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.88 E-value=2.8e-09 Score=92.82 Aligned_cols=94 Identities=14% Similarity=0.131 Sum_probs=75.1
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCCCC-C--CCE
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFERIP-K--GDA 267 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~p-~--~D~ 267 (369)
.....+|||||||+|..+..+++.. ++.+++++|. +.+++.+++ .+++.++.+|+....+ . .|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456899999999999999999885 6679999999 777776543 2479999999876322 2 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
|++...++++. +++.+.|||||++++....
T Consensus 155 i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 99999988763 5688999999999987653
No 214
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.88 E-value=1.3e-09 Score=93.46 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=73.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC--CCCC-C-CEEEecccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE--RIPK-G-DAILMKWIL 274 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~--~~p~-~-D~v~~~~vl 274 (369)
...+|||+|||+|.++..++.+.. .+++++|. +.+++.+++. ++++++.+|+.+ +.+. . |+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 357999999999999999887753 38999999 8888776542 589999999876 3332 3 999998775
Q ss_pred ccCChhHHHHHHHHHHH--hCCCCCEEEEEecc
Q 017595 275 HNWDDEHCLTLLKNCYE--AIPENGKIIIIDRM 305 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~--~L~pgG~lli~e~~ 305 (369)
| . .....+++.+.+ +|+|||++++....
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 5 3 344577888876 49999999877653
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.87 E-value=6.3e-10 Score=97.63 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=76.4
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCC---CC-----C-CCE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFER---IP-----K-GDA 267 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~---~p-----~-~D~ 267 (369)
+..+|||||||+|..+..+++..| +.+++++|. +..++.+++. ++++++.+|+.+. ++ . .|+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 457999999999999999999987 789999999 7777766542 4799999997541 21 3 399
Q ss_pred EEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 268 ILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
|++... .+....+++++.+.|+|||+|++.+...
T Consensus 152 V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 152 IFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 987654 2456789999999999999999877654
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.87 E-value=9.3e-10 Score=96.87 Aligned_cols=95 Identities=11% Similarity=0.139 Sum_probs=75.8
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC--C-C------CCC-C
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE--R-I------PKG-D 266 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~--~-~------p~~-D 266 (369)
+..+|||||||+|..+..+++..| +.+++++|. +.+++.+++. ++++++.+|..+ + + +.. |
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 567999999999999999999987 789999999 8777766532 479999999875 2 2 233 9
Q ss_pred EEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 267 AILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+|++... ......+++++.+.|+|||++++.+..
T Consensus 150 ~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 150 FGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred EEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 9987532 345678999999999999988876554
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.87 E-value=8.1e-10 Score=101.18 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=72.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCCC---CCC-CCEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFER---IPK-GDAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~v~~ 270 (369)
...+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|+.+. .+. .|+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 568999999999999999999888889999999 888776542 36899999998762 123 399998
Q ss_pred ccccccCChhHH--HHHHHHHHHhCCCCCEEEEEe
Q 017595 271 KWILHNWDDEHC--LTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 271 ~~vlh~~~d~~~--~~~L~~~~~~L~pgG~lli~e 303 (369)
...-+.-++... ..++++++++|+|||++++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 654332222221 689999999999999998865
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.86 E-value=1e-09 Score=100.99 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=75.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCCC---CCCC-CEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFER---IPKG-DAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p~~-D~v~~ 270 (369)
...+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .++++++.+|+.+. .+.. |+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 458999999999999999998878889999999 888775532 36899999998762 2333 99998
Q ss_pred ccccccCChhHH--HHHHHHHHHhCCCCCEEEEEe
Q 017595 271 KWILHNWDDEHC--LTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 271 ~~vlh~~~d~~~--~~~L~~~~~~L~pgG~lli~e 303 (369)
...-+..+.+.. ..++++++++|+|||++++..
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 643221111221 689999999999999998864
No 219
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.83 E-value=4.7e-09 Score=90.88 Aligned_cols=95 Identities=9% Similarity=0.059 Sum_probs=78.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-CCCCC-CEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-RIPKG-DAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~ 276 (369)
..+.+|||||||+|-++..+. |..+++++|+ +.+++.++.. .+..+...|+.. +.|.. |++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 457899999999999999887 8899999999 8888876643 567899999998 55544 99999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
+.+++....+ ++...|+|++.++-.+
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 9766655555 8899999998777666
No 220
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.83 E-value=2.1e-09 Score=97.30 Aligned_cols=102 Identities=16% Similarity=0.247 Sum_probs=73.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPK 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~ 264 (369)
+..+++.++ .....+|||||||+|.++..+++... +++++|+ +.+++.+++. ++++++.+|+.+ +++.
T Consensus 17 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~ 93 (285)
T 1zq9_A 17 INSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPF 93 (285)
T ss_dssp HHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCC
T ss_pred HHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchh
Confidence 345566565 56678999999999999999999864 7788887 7666654421 579999999988 6776
Q ss_pred CCEEEeccccccCChhHHHHHHH--------------HH--HHhCCCCCEE
Q 017595 265 GDAILMKWILHNWDDEHCLTLLK--------------NC--YEAIPENGKI 299 (369)
Q Consensus 265 ~D~v~~~~vlh~~~d~~~~~~L~--------------~~--~~~L~pgG~l 299 (369)
.|+|+++.. ++++.+...++|. ++ +++++|||++
T Consensus 94 fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 94 FDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp CSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred hcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 699888543 4454444445543 22 4689999965
No 221
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.82 E-value=5e-09 Score=89.46 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=66.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-CCceEEeCCCCCCCCCC-CEEEeccccccCChhH
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-RGVKHIGGNMFERIPKG-DAILMKWILHNWDDEH 281 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~rv~~~~~d~~~~~p~~-D~v~~~~vlh~~~d~~ 281 (369)
....+|||+|||+|.++..+++. +..+++++|. +.+++.+++. .+++++.+|+.+ ++.. |+|++...+|++++..
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC-------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEECCCchhccCch
Confidence 35679999999999999999887 5557999999 8887776543 389999999987 3344 9999999999987655
Q ss_pred HHHHHHHHHHhC
Q 017595 282 CLTLLKNCYEAI 293 (369)
Q Consensus 282 ~~~~L~~~~~~L 293 (369)
..++++++.+.+
T Consensus 128 ~~~~l~~~~~~~ 139 (200)
T 1ne2_A 128 DRAFIDKAFETS 139 (200)
T ss_dssp CHHHHHHHHHHE
T ss_pred hHHHHHHHHHhc
Confidence 568999999998
No 222
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.82 E-value=6.1e-09 Score=92.92 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=73.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----------CCceEEeCCCCCCCCCCCEEEecccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----------RGVKHIGGNMFERIPKGDAILMKWIL 274 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~rv~~~~~d~~~~~p~~D~v~~~~vl 274 (369)
.+.+|||||||+|.++..+++. + .+++++|+ +.+++.++++ +|++++.+|..+-....|+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d--- 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL--- 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES---
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC---
Confidence 5689999999999999999988 7 89999999 8999888753 57999999987733234999976
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
.+++. .+++.++++|+|||.+++..
T Consensus 147 --~~dp~--~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 --QEPDI--HRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp --SCCCH--HHHHHHHTTEEEEEEEEEEE
T ss_pred --CCChH--HHHHHHHHhcCCCcEEEEEc
Confidence 23332 48999999999999998864
No 223
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=2.6e-09 Score=96.00 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=79.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCC-CCCC-CEEEecccc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFER-IPKG-DAILMKWIL 274 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~-~p~~-D~v~~~~vl 274 (369)
+.+..+|||+|||+|.++..+++.++..+++++|. +.+++.+++ .+++.++.+|+.+. .+.. |+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45668999999999999999999988889999999 888776654 25789999999874 3223 999887653
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
....+++++.+.|+|||++++.+...
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 34568999999999999999888754
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.82 E-value=1.9e-09 Score=98.14 Aligned_cols=98 Identities=19% Similarity=0.211 Sum_probs=72.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----------CCCceEEeCCCCCC---CCC-CCEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----------YRGVKHIGGNMFER---IPK-GDAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~v~~ 270 (369)
...+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|+.+. .+. .|+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 458999999999999999999888889999999 877775543 36899999998652 223 399997
Q ss_pred ccccccCChh---HHHHHHHHHHHhCCCCCEEEEEe
Q 017595 271 KWILHNWDDE---HCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 271 ~~vlh~~~d~---~~~~~L~~~~~~L~pgG~lli~e 303 (369)
...-+..... ...+++++++++|+|||++++..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 5332201110 12589999999999999998863
No 225
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.81 E-value=1.1e-08 Score=92.26 Aligned_cols=115 Identities=11% Similarity=0.066 Sum_probs=82.2
Q ss_pred cCCcceEEEEcC------ChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCCCCCceE-EeCCCCC-CCCCC-CEEEecc
Q 017595 204 FEQIKQLVDVGG------GLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPSYRGVKH-IGGNMFE-RIPKG-DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~------G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~rv~~-~~~d~~~-~~p~~-D~v~~~~ 272 (369)
+....+|||+|| |+|. ..+++..| +.+++++|+ +. .+++++ +.+|+.+ +++.. |+|++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v~~v~~~i~gD~~~~~~~~~fD~Vvsn~ 131 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------VSDADSTLIGDCATVHTANKWDLIISDM 131 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------BCSSSEEEESCGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------CCCCEEEEECccccCCccCcccEEEEcC
Confidence 556789999999 5577 44566666 689999999 54 247899 9999988 45444 9999864
Q ss_pred cccc--------C-ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHH
Q 017595 273 ILHN--------W-DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMA 343 (369)
Q Consensus 273 vlh~--------~-~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ 343 (369)
..+. . ..+....+|+.+++.|||||++++..+... ..+++.+
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~-----------------------------~~~~l~~ 182 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS-----------------------------WNADLYK 182 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-----------------------------CCHHHHH
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC-----------------------------CHHHHHH
Confidence 3221 0 123356899999999999999998654211 1236777
Q ss_pred HHHHcCCcceeEE
Q 017595 344 LANEAGFNGVNYE 356 (369)
Q Consensus 344 ll~~aGf~~~~~~ 356 (369)
++++.||..+++.
T Consensus 183 ~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 183 LMGHFSWWTAFVT 195 (290)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHHcCCcEEEEE
Confidence 8888888877765
No 226
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.77 E-value=5.4e-09 Score=97.68 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=70.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC-------CCCceEEeCCCCC-CCCCC-CEEEecccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS-------YRGVKHIGGNMFE-RIPKG-DAILMKWILHN 276 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~ 276 (369)
+.++|||||||+|.++...++... .+++++|...+++.|++ .++|+++.+|+.+ ++|+. |+|++..+-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 357999999999999887666543 47888888545554442 2689999999988 77765 99987554444
Q ss_pred CChh-HHHHHHHHHHHhCCCCCEEEE
Q 017595 277 WDDE-HCLTLLKNCYEAIPENGKIII 301 (369)
Q Consensus 277 ~~d~-~~~~~L~~~~~~L~pgG~lli 301 (369)
+..+ ....++....+.|+|||+++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 3323 456788888899999998763
No 227
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.73 E-value=3.3e-09 Score=105.27 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=81.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCC---CCC-C-CCEEEeccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE---RIP-K-GDAILMKWI 273 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~---~~p-~-~D~v~~~~v 273 (369)
.+.+|||||||.|.++..+++. +.+++++|. +..++.|+.+ -+|++..+++.+ ..+ . .|+|++..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5679999999999999999987 568999999 7777766532 358999999865 233 2 399999999
Q ss_pred cccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCC
Q 017595 274 LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVT 309 (369)
Q Consensus 274 lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~ 309 (369)
|||+++++...-+.++.+.|+++|+.++...+..+.
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 999988775555667888888888888887765443
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.72 E-value=9.7e-09 Score=95.48 Aligned_cols=100 Identities=9% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCC-----CeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCCCC-CC-CEEEec
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPH-----IEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFERIP-KG-DAILMK 271 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~~p-~~-D~v~~~ 271 (369)
....+|||+|||+|.++..+++..+. .+++++|+ +.+++.++.. .++.++.+|.+.+.+ .. |+|++.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 35689999999999999999988765 68899998 7777665531 268999999988543 33 999999
Q ss_pred cccccCChhHH----------------HHHHHHHHHhCCCCCEEEEEec
Q 017595 272 WILHNWDDEHC----------------LTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 272 ~vlh~~~d~~~----------------~~~L~~~~~~L~pgG~lli~e~ 304 (369)
-.+++++.++. ..+++++.+.|+|||+++++.+
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 88777654432 2689999999999999988764
No 229
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.72 E-value=2.9e-08 Score=94.72 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=77.6
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCCCC-CC-CEEEec
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFERIP-KG-DAILMK 271 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p-~~-D~v~~~ 271 (369)
.+++.+. .....+|||+|||+|.++..+++++ +..+++++|+ +.+++.+ .++.++.+|+++..+ .. |+|+++
T Consensus 30 ~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~N 105 (421)
T 2ih2_A 30 FMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGN 105 (421)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEEC
T ss_pred HHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEEC
Confidence 3334343 3345699999999999999999987 6789999999 7777666 689999999988433 33 999995
Q ss_pred cccc----------cCChhHH-----------------HHHHHHHHHhCCCCCEEEEEec
Q 017595 272 WILH----------NWDDEHC-----------------LTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 272 ~vlh----------~~~d~~~-----------------~~~L~~~~~~L~pgG~lli~e~ 304 (369)
-... |++++.. ..+++++.+.|+|||+++++-+
T Consensus 106 PPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 106 PPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 3221 1222221 2679999999999999988765
No 230
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.72 E-value=2.2e-08 Score=96.48 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=80.5
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-C--CC-CC-CEEEe
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-R--IP-KG-DAILM 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p-~~-D~v~~ 270 (369)
.....+|||+|||+|..+..+++..++ .+++++|. +..++.+++ .+++.++.+|+.+ + ++ .. |+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 456689999999999999999999887 79999999 776665443 2579999999987 3 44 33 99986
Q ss_pred ------ccccccCChhH-------H-------HHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 271 ------KWILHNWDDEH-------C-------LTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 271 ------~~vlh~~~d~~-------~-------~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
..++++.++.. . .++|+++.+.|||||+|++.+....
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 34555554321 1 5789999999999999998876553
No 231
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.71 E-value=6.1e-08 Score=83.00 Aligned_cols=94 Identities=16% Similarity=0.124 Sum_probs=72.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----C-CceEEeCCCCCCCC-CCCEEEeccccccC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----R-GVKHIGGNMFERIP-KGDAILMKWILHNW 277 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~-rv~~~~~d~~~~~p-~~D~v~~~~vlh~~ 277 (369)
....+|||+|||+|.++..+++..+ .+++++|. +.+++.++.. . +++++.+|+.+ ++ ..|+|++...+|..
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEECCCCSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEEcCCCccc
Confidence 3567999999999999999998743 37999998 7777766542 2 79999999987 33 34999999998887
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
.......+++++.+.+ |+ +++..
T Consensus 126 ~~~~~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp STTTTHHHHHHHHHHC--SE-EEEEE
T ss_pred cCCchHHHHHHHHHhc--Cc-EEEEE
Confidence 6555678899999998 44 44433
No 232
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.71 E-value=3.5e-08 Score=92.66 Aligned_cols=122 Identities=12% Similarity=0.061 Sum_probs=89.9
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCCC-C-CEEEecc
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPK-G-DAILMKW 272 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~-~-D~v~~~~ 272 (369)
+....+|||+|||+|.++..++...+..+++++|+ +.+++.++.. ++++++.+|+.+ +.+. . |+|++..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45678999999999999999999988778999999 8888776542 479999999988 5543 3 9999975
Q ss_pred ccccCC------hhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHH
Q 017595 273 ILHNWD------DEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALAN 346 (369)
Q Consensus 273 vlh~~~------d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~ 346 (369)
..+... .+.-..+++.+.+.| ||+++++.. +.+.+.+.+.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------------------------------~~~~~~~~~~ 340 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT--------------------------------EKKAIEEAIA 340 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES--------------------------------CHHHHHHHHH
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC--------------------------------CHHHHHHHHH
Confidence 544321 111267888999988 555555432 1344666888
Q ss_pred HcCCcceeEEEec
Q 017595 347 EAGFNGVNYECFV 359 (369)
Q Consensus 347 ~aGf~~~~~~~~~ 359 (369)
+.||+..+..++.
T Consensus 341 ~~G~~~~~~~~~~ 353 (373)
T 3tm4_A 341 ENGFEIIHHRVIG 353 (373)
T ss_dssp HTTEEEEEEEEEE
T ss_pred HcCCEEEEEEEEE
Confidence 8999998887765
No 233
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.70 E-value=1.3e-08 Score=91.53 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=75.8
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CC-----CCC-CEE
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RI-----PKG-DAI 268 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~-----p~~-D~v 268 (369)
.....+|||+|||+|..+..+++..++ .+++++|. +..++.+++ .++++++.+|+.+ +. +.. |+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 445679999999999999999999877 78999998 777665543 2589999999876 32 333 999
Q ss_pred Eec------ccccc---CCh-------hHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 269 LMK------WILHN---WDD-------EHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 269 ~~~------~vlh~---~~d-------~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
++. .+++. |+. +...++|+++.+.|||||++++.....
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 876 22221 111 223689999999999999999876654
No 234
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.70 E-value=2e-08 Score=88.70 Aligned_cols=103 Identities=9% Similarity=0.195 Sum_probs=71.6
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCC-CCCC-CC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFE-RIPK-GD 266 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~-~D 266 (369)
.+.+++.++ .....+|||||||+|.++..++++. .+++++|. +.+++.+++ .++++++.+|+.+ +++. .+
T Consensus 19 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 95 (244)
T 1qam_A 19 IDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQS 95 (244)
T ss_dssp HHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCC
T ss_pred HHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCC
Confidence 345666555 5567899999999999999999987 67888888 777665443 3689999999988 6664 35
Q ss_pred EEEeccccccCChhHHHHHH--------------HHHHHhCCCCCEE
Q 017595 267 AILMKWILHNWDDEHCLTLL--------------KNCYEAIPENGKI 299 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L--------------~~~~~~L~pgG~l 299 (369)
+++..+.-++++.+-..+++ +.+.+.++|+|++
T Consensus 96 ~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 96 YKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp CEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred eEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 45555555555433333333 3366777777643
No 235
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.67 E-value=5e-09 Score=92.63 Aligned_cols=107 Identities=11% Similarity=0.193 Sum_probs=77.2
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----CCceEEeCCCCC-CCCC-CC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----RGVKHIGGNMFE-RIPK-GD 266 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~rv~~~~~d~~~-~~p~-~D 266 (369)
...+++.++ .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++. ++++++.+|+.+ +++. ..
T Consensus 18 ~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 18 LNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCC
Confidence 345555565 5667899999999999999999986 78999999 7888777653 579999999988 6653 33
Q ss_pred EEEeccccccCChhHHHHHH--------------HHHHHhCCCCCEEEEEe
Q 017595 267 AILMKWILHNWDDEHCLTLL--------------KNCYEAIPENGKIIIID 303 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L--------------~~~~~~L~pgG~lli~e 303 (369)
+++.++.-++.+.+....++ +.+.+.|+|||++.+..
T Consensus 95 f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 95 YKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 34444444444433333333 66899999999876644
No 236
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.67 E-value=4.4e-07 Score=84.53 Aligned_cols=165 Identities=15% Similarity=0.190 Sum_probs=100.3
Q ss_pred hHHHHHHhccCc----CCcceEEEEcCChhHHHHHH--------HHhC-------CCCeEEEcchhHH--------HHhC
Q 017595 193 VMNRILDSYNGF----EQIKQLVDVGGGLGVTLNII--------TSRY-------PHIEGVNFDLPHV--------IQNA 245 (369)
Q Consensus 193 ~~~~~~~~~~~~----~~~~~vLDvG~G~G~~~~~l--------~~~~-------p~~~~~~~D~~~~--------~~~a 245 (369)
.+++.++.+... .+..+|+|+|||+|..+..+ .+++ |.+.++.-|+|.- +...
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~ 114 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPL 114 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCB
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhh
Confidence 444445555411 23589999999999888776 3333 7888888887521 1111
Q ss_pred CC----------C-CC---ceEEeCCCCC-CCCCC--CEEEeccccccCChh----------------------------
Q 017595 246 PS----------Y-RG---VKHIGGNMFE-RIPKG--DAILMKWILHNWDDE---------------------------- 280 (369)
Q Consensus 246 ~~----------~-~r---v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d~---------------------------- 280 (369)
.+ . .+ +.-+++.|+. .+|.. |+|+++.+||.+++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ 194 (374)
T 3b5i_A 115 VSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTT 194 (374)
T ss_dssp CCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHH
T ss_pred hhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHH
Confidence 11 0 01 3556788887 67765 999999999987511
Q ss_pred --------HHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhh----hhhhHHH-HHh--------hc--C--Ccc
Q 017595 281 --------HCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREA----SMTDIIM-LMQ--------FS--G--GRE 335 (369)
Q Consensus 281 --------~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~----~~~d~~~-~~~--------~~--~--~~~ 335 (369)
+...+|+..++.|+|||++++.-...++........... ....... +.. .. + ...
T Consensus 195 ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ 274 (374)
T 3b5i_A 195 AYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYA 274 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccC
Confidence 344579999999999999998877654421100000000 0000010 100 00 1 123
Q ss_pred CCHHHHHHHHH-HcCCcceeEEE
Q 017595 336 RTTQEFMALAN-EAGFNGVNYEC 357 (369)
Q Consensus 336 ~t~~e~~~ll~-~aGf~~~~~~~ 357 (369)
+|.+|++++++ +.||++.++.-
T Consensus 275 ps~~E~~~~l~~~~~F~I~~le~ 297 (374)
T 3b5i_A 275 PSLQDFKEVVDANGSFAIDKLVV 297 (374)
T ss_dssp CCHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCHHHHHHHHHhcCCcEEEEEEE
Confidence 69999999998 58999877643
No 237
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.63 E-value=3.6e-08 Score=91.02 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=73.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C--CceEEeCCCCCCC------C-CCCEEE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R--GVKHIGGNMFERI------P-KGDAIL 269 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--rv~~~~~d~~~~~------p-~~D~v~ 269 (369)
...+|||+|||+|.++..++.... +++++|. +.+++.+++. + +++++.+|+++.. . ..|+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 457999999999999999998754 8999999 8887766542 2 5999999998722 2 249998
Q ss_pred eccc----------cccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 270 MKWI----------LHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 270 ~~~v----------lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+... ++.. ++...+++++.+.|+|||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 8432 2222 45678999999999999997776654
No 238
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.62 E-value=3e-08 Score=88.76 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=87.4
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-------CCCceEEeCCCCCCCCC--CCEEEecccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-------YRGVKHIGGNMFERIPK--GDAILMKWIL 274 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p~--~D~v~~~~vl 274 (369)
....+|||+|||+|.++..++.+. ..+++.+|+ |..++.+++ .++++++.+|..+-.+. .|.|++...
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p- 201 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV- 201 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC-
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC-
Confidence 467899999999999999988774 568999999 877776653 26799999999873333 398887643
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcce
Q 017595 275 HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGV 353 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 353 (369)
..+..+|..+.++|+|||.|.+.+.+.... ......+.+++++++.|+++.
T Consensus 202 -----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~-----------------------~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL-----------------------MPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG-----------------------TTTTTHHHHHHHHHHTTCEEE
T ss_pred -----CcHHHHHHHHHHHcCCCCEEEEEeeecccc-----------------------cchhHHHHHHHHHHHcCCcEE
Confidence 223467888999999999998877653221 011235567788889998753
No 239
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.56 E-value=8.5e-08 Score=91.78 Aligned_cols=103 Identities=13% Similarity=0.115 Sum_probs=78.2
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-C--CCC--CCEEEe--
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-R--IPK--GDAILM-- 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~--~p~--~D~v~~-- 270 (369)
.....+|||+|||+|..+..+++..++.+++++|. +..++.+++. -++.++.+|+.+ + ++. .|+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45567999999999999999999999889999998 6665554321 258999999987 2 332 399986
Q ss_pred ----ccccccCChh-------HH-------HHHHHHHHHhCCCCCEEEEEeccC
Q 017595 271 ----KWILHNWDDE-------HC-------LTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 271 ----~~vlh~~~d~-------~~-------~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
..++++.++. +. .++|+++.+.|||||++++.....
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2455554432 11 488999999999999999887654
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.55 E-value=7.9e-08 Score=87.46 Aligned_cols=99 Identities=13% Similarity=0.228 Sum_probs=69.7
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CCCCCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RIPKGD 266 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p~~D 266 (369)
+.+++.++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +.+..|
T Consensus 32 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D 108 (299)
T 2h1r_A 32 DKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFD 108 (299)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCS
T ss_pred HHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCC
Confidence 34455454 556789999999999999999987 357899998 777665543 2689999999988 565559
Q ss_pred EEEeccccccCChhHHHHHH---------------HHHHHhCCCCC
Q 017595 267 AILMKWILHNWDDEHCLTLL---------------KNCYEAIPENG 297 (369)
Q Consensus 267 ~v~~~~vlh~~~d~~~~~~L---------------~~~~~~L~pgG 297 (369)
+|++.. -++++.+...++| +.+.+.++|+|
T Consensus 109 ~Vv~n~-py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 109 VCTANI-PYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEEEcC-CcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 998754 4556666666666 44678888876
No 241
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.55 E-value=3.4e-07 Score=84.26 Aligned_cols=141 Identities=12% Similarity=0.144 Sum_probs=104.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCC---------------------------CCCceEEeCCC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPS---------------------------YRGVKHIGGNM 258 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~---------------------------~~rv~~~~~d~ 258 (369)
+...||.+|||.......+...+++++++.+|.|.+++.-++ .++..++..|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 568999999999999999999889999999999988764221 26799999999
Q ss_pred CC-CC--------C--CC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhh--hH
Q 017595 259 FE-RI--------P--KG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMT--DI 324 (369)
Q Consensus 259 ~~-~~--------p--~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~--d~ 324 (369)
.+ ++ + .. .++++-.+|++++.++...+|+.+.+.+ |+|.+++.|.+.+..+... +...+ .+
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~----fg~~m~~~l 251 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDR----FGAIMQSNL 251 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCC----HHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcch----HHHHHHHHh
Confidence 87 33 1 12 7889999999999999999999999987 7888888999877332111 11111 11
Q ss_pred HH-HHh-hcC-CccCCHHHHHHHHHHcCCc
Q 017595 325 IM-LMQ-FSG-GRERTTQEFMALANEAGFN 351 (369)
Q Consensus 325 ~~-~~~-~~~-~~~~t~~e~~~ll~~aGf~ 351 (369)
.. ... ..+ ....+.++..+.|.++||+
T Consensus 252 ~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 252 KESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 11 000 001 1335889999999999997
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.51 E-value=8.4e-08 Score=92.01 Aligned_cols=102 Identities=8% Similarity=0.054 Sum_probs=76.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCCC------CCceEEeCCCCC-C--CCCC-CEEEe-
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFE-R--IPKG-DAILM- 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~-~--~p~~-D~v~~- 270 (369)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++. . +.++.+|+.+ + .+.. |+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 445689999999999999999999875 68999999 7777765532 4 8999999876 2 3333 99985
Q ss_pred -----ccccc-------cCChhHH-------HHHHHHHHHhCCCCCEEEEEeccC
Q 017595 271 -----KWILH-------NWDDEHC-------LTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 271 -----~~vlh-------~~~d~~~-------~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
..+++ .++.++. .++|+.+.+.|||||+|+...-..
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 12232 2332222 689999999999999998765544
No 243
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.51 E-value=2.7e-07 Score=89.20 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=76.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC-CCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-C--CCCC-CEEEec--
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP-HIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-R--IPKG-DAILMK-- 271 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p~~-D~v~~~-- 271 (369)
...+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ..++.++.+|+.+ + .+.. |+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 568999999999999999999875 478999999 777766543 2579999999987 3 3443 999872
Q ss_pred ----cccc-------cCChhH-------HHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 ----WILH-------NWDDEH-------CLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 ----~vlh-------~~~d~~-------~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
.+++ +|+.++ ..++|+++.++|||||+|++.....
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 2333 233222 2478999999999999998876544
No 244
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.46 E-value=1.3e-07 Score=93.62 Aligned_cols=126 Identities=18% Similarity=0.182 Sum_probs=87.1
Q ss_pred hhhhhhcCchHHHHHHHHHHhhhhHhHHHHHHhccC---cCCcceEEEEcCChhHHHHHH---HHh-CCCCeEEEcchhH
Q 017595 168 VYEYAGNDSRFNGVFNKAMLNHTSIVMNRILDSYNG---FEQIKQLVDVGGGLGVTLNII---TSR-YPHIEGVNFDLPH 240 (369)
Q Consensus 168 ~~e~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~---~~~~~~vLDvG~G~G~~~~~l---~~~-~p~~~~~~~D~~~ 240 (369)
.||.+++|+-.-..|.+++.. .+.+..+. ..+...|+|||||+|-++... +++ .-.++++.++-..
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp 395 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP 395 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH
T ss_pred hhhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence 578889998777777776643 23332221 224468999999999884433 333 2334678888744
Q ss_pred HHHhCCC-------CCCceEEeCCCCC-CCCCC-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEE
Q 017595 241 VIQNAPS-------YRGVKHIGGNMFE-RIPKG-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKII 300 (369)
Q Consensus 241 ~~~~a~~-------~~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~ll 300 (369)
++..+.+ .++|+++.+|+.+ ..|+. |+|++-.+=+.+..|-...+|....+.|||||.++
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 4444433 2689999999999 78876 99988776665555666678888889999999764
No 245
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.46 E-value=7.1e-08 Score=90.96 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=71.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C--CceEEeCCCCCCC------C-CCCEEE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R--GVKHIGGNMFERI------P-KGDAIL 269 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--rv~~~~~d~~~~~------p-~~D~v~ 269 (369)
...+|||+|||+|.++..++... ..+++++|. +.+++.+++. + +++++.+|+++.+ + ..|+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 45799999999999999999863 237899998 7777766531 3 8999999997622 1 239999
Q ss_pred eccccc-----cCC--hhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 270 MKWILH-----NWD--DEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 270 ~~~vlh-----~~~--d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+..... ... -+...++++.+.+.|+|||.|++...
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 853321 221 13345688899999999999887654
No 246
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.45 E-value=3.5e-06 Score=78.54 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=92.3
Q ss_pred cceEEEEcCChhHHHHHHHHh-----------------CCCCeEEEcchh-----------HH-HH----h-CCCCCC--
Q 017595 207 IKQLVDVGGGLGVTLNIITSR-----------------YPHIEGVNFDLP-----------HV-IQ----N-APSYRG-- 250 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~-----------~~-~~----~-a~~~~r-- 250 (369)
..+|+|+||++|..+..+... .|.+.++.-|+| .. .+ . ....+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 689999999999988876665 477888888987 11 11 1 111112
Q ss_pred ceEEeCCCCC-CCCCC--CEEEeccccccCChhH-------------------------H------------HHHHHHHH
Q 017595 251 VKHIGGNMFE-RIPKG--DAILMKWILHNWDDEH-------------------------C------------LTLLKNCY 290 (369)
Q Consensus 251 v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~d~~-------------------------~------------~~~L~~~~ 290 (369)
+.-+++.|+. .+|.. |+|+++.+||.+++.. . ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345567777 57765 9999999999765321 1 12377779
Q ss_pred HhCCCCCEEEEEeccCCCC--CcchHHHhhhhhhhHHHHH--------hh-cCCccCCHHHHHHHHHHcC-CcceeEE
Q 017595 291 EAIPENGKIIIIDRMPMVT--PEATAAAREASMTDIIMLM--------QF-SGGRERTTQEFMALANEAG-FNGVNYE 356 (369)
Q Consensus 291 ~~L~pgG~lli~e~~~~~~--~~~~~~~~~~~~~d~~~~~--------~~-~~~~~~t~~e~~~ll~~aG-f~~~~~~ 356 (369)
+.|+|||++++.-...... ...........+.++.... .+ .-...++.+|++++++++| |++.++.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999999999887765443 1110000111121211110 01 0123469999999999985 7877653
No 247
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.41 E-value=3.3e-06 Score=78.03 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=91.8
Q ss_pred CCcceEEEEcCChhHHHHHHHHh----------------CCCCeEEEcchhH--HHHhCCCC------CC---ceEEeCC
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSR----------------YPHIEGVNFDLPH--VIQNAPSY------RG---VKHIGGN 257 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~----------------~p~~~~~~~D~~~--~~~~a~~~------~r---v~~~~~d 257 (369)
++..+|+|+||++|..+..+... .|.+.++.-|+|. .-...+.. .+ +.-+++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 35679999999999765543332 4677888888852 11111111 12 3456678
Q ss_pred CCC-CCCCC--CEEEeccccccCCh-------------------------------hHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 258 MFE-RIPKG--DAILMKWILHNWDD-------------------------------EHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 258 ~~~-~~p~~--D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
|+. .+|.. |+++++..||.+++ .+...+|+..++.|+|||++++.-
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 887 67875 99999999997653 123456999999999999999877
Q ss_pred ccCCCCCcch------HHHhhhhhhhHHHHHhh---------cCCccCCHHHHHHHHHHcCC-cceeE
Q 017595 304 RMPMVTPEAT------AAAREASMTDIIMLMQF---------SGGRERTTQEFMALANEAGF-NGVNY 355 (369)
Q Consensus 304 ~~~~~~~~~~------~~~~~~~~~d~~~~~~~---------~~~~~~t~~e~~~ll~~aGf-~~~~~ 355 (369)
...+...... +......+.++...... .-...++.+|++++++++|+ ++.+.
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 6554431100 00011111111111000 01124689999999999965 66654
No 248
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.38 E-value=4e-07 Score=90.02 Aligned_cols=126 Identities=18% Similarity=0.106 Sum_probs=85.5
Q ss_pred hhhhhhcCchHHHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHh----C---------CCCeEE
Q 017595 168 VYEYAGNDSRFNGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR----Y---------PHIEGV 234 (369)
Q Consensus 168 ~~e~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~----~---------p~~~~~ 234 (369)
.||-+++|+-.-..|.+++.. .+.+.++.-.+...|||||||+|.++...+.+ . ...+++
T Consensus 378 tYe~fekD~vRy~~Y~~AI~~-------al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVy 450 (745)
T 3ua3_A 378 VYNTFEQDQIKYDVYGEAVVG-------ALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLY 450 (745)
T ss_dssp HHHHHHHCHHHHHHHHHHHHH-------HHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEE
T ss_pred HHHHHcCChhhHHHHHHHHHH-------HHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEE
Confidence 577788888777777776654 22222221124578999999999996432222 1 234788
Q ss_pred Ecch-hHHHHhCCC------CCCceEEeCCCCC-CC------CC-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEE
Q 017595 235 NFDL-PHVIQNAPS------YRGVKHIGGNMFE-RI------PK-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKI 299 (369)
Q Consensus 235 ~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~------p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 299 (369)
.++. |..+...+. .++|+++.+|+.+ .. ++ .|+|++-..=+....+-...+|..+.+.|||||.+
T Consensus 451 AVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 451 IVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp EEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEE
Confidence 8887 443322211 2679999999998 55 44 49999888766555565667888889999999965
Q ss_pred E
Q 017595 300 I 300 (369)
Q Consensus 300 l 300 (369)
+
T Consensus 531 i 531 (745)
T 3ua3_A 531 I 531 (745)
T ss_dssp E
T ss_pred E
Confidence 4
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.38 E-value=1.7e-07 Score=90.13 Aligned_cols=108 Identities=16% Similarity=0.097 Sum_probs=78.3
Q ss_pred HHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-------------CCCeEEEcch-hHHHHhCCC------CC--CceE
Q 017595 196 RILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-------------PHIEGVNFDL-PHVIQNAPS------YR--GVKH 253 (369)
Q Consensus 196 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~~--rv~~ 253 (369)
.+.+.+. .....+|+|.|||+|.++..+.+.. +..+++++|+ +.+++.|+. .. ++.+
T Consensus 162 ~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i 240 (445)
T 2okc_A 162 AMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPI 240 (445)
T ss_dssp HHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSE
T ss_pred HHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCE
Confidence 3333333 3455799999999999999988763 4567899998 777665542 12 6889
Q ss_pred EeCCCCC-CCCCC-CEEEeccccccCChh---------------HHHHHHHHHHHhCCCCCEEEEEec
Q 017595 254 IGGNMFE-RIPKG-DAILMKWILHNWDDE---------------HCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 254 ~~~d~~~-~~p~~-D~v~~~~vlh~~~d~---------------~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+.+|.+. +.... |+|+++-.++..... ....+++++.+.|+|||++.++-+
T Consensus 241 ~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 241 VCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp EECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 9999988 43333 999998776653221 124789999999999999988764
No 250
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.37 E-value=1.8e-07 Score=88.60 Aligned_cols=98 Identities=11% Similarity=0.018 Sum_probs=73.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------C-C-CceEEeCCCCCCC------CC-CCEEE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------Y-R-GVKHIGGNMFERI------PK-GDAIL 269 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~-rv~~~~~d~~~~~------p~-~D~v~ 269 (369)
...+|||+|||+|.++..++... ..+++++|. +.+++.+++ . + +++++.+|+++.. +. .|+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 45799999999999999999874 458999998 777776543 2 3 7899999997721 22 39999
Q ss_pred eccccccCC-------hhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 270 MKWILHNWD-------DEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 270 ~~~vlh~~~-------d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+.-.....+ ......++.++.+.|+|||.+++...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 863221110 14567899999999999999888664
No 251
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.36 E-value=1.4e-07 Score=88.89 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=74.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCC------CCC-CEEEec
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERI------PKG-DAILMK 271 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~------p~~-D~v~~~ 271 (369)
...+|||+|||+|.++..++.. ..+++++|. +.+++.++.. ++++++.+|+++.. +.. |+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999988 567899998 7777766542 45999999997621 223 999985
Q ss_pred cccccCCh-------hHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 272 WILHNWDD-------EHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 272 ~vlh~~~d-------~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
-.....+. .....+++++.+.|+|||.+++....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 43222111 34568999999999999999887654
No 252
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.35 E-value=1.3e-06 Score=77.22 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=66.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--CCceEEeCCCCC-CCCCC--CE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--RGVKHIGGNMFE-RIPKG--DA 267 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~rv~~~~~d~~~-~~p~~--D~ 267 (369)
.+.+++.++ .....+|||||||+|.++..++++ +..+++++|+ +.+++.+++. .+++++.+|+.+ +++.. +.
T Consensus 20 ~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 20 LKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 345666565 556789999999999999999987 4578999998 7787776653 579999999988 66542 56
Q ss_pred EEeccccccCChhHHHHHH
Q 017595 268 ILMKWILHNWDDEHCLTLL 286 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L 286 (369)
++..+.-++.+.+-..++|
T Consensus 98 ~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 98 KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp EEEEECCTTTHHHHHHHHH
T ss_pred EEEEECchhccHHHHHHHH
Confidence 6666666666444333333
No 253
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.34 E-value=1.6e-07 Score=89.00 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=74.5
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------C-CceEEeCCCCCCC------CC-CCEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------R-GVKHIGGNMFERI------PK-GDAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~-rv~~~~~d~~~~~------p~-~D~v~~ 270 (369)
...+|||+|||+|.++..++.. +..+++++|. +.+++.+++. + +++++.+|+++.. +. .|+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5679999999999999999987 3458999998 7777766542 2 7999999987621 22 399998
Q ss_pred ccccccCCh-------hHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 271 KWILHNWDD-------EHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 271 ~~vlh~~~d-------~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.-..+..+. .....+++++.+.|+|||++++....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 543222211 44668999999999999998887654
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.32 E-value=7.4e-07 Score=84.00 Aligned_cols=110 Identities=7% Similarity=0.008 Sum_probs=79.4
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC--------------------------------------CeEEE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH--------------------------------------IEGVN 235 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 235 (369)
+..++.... +.+...|||.+||+|.++++.+....+ .++++
T Consensus 190 Aa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 190 AAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 345555454 777889999999999999998876544 56999
Q ss_pred cch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC-CEEEeccccccC-C-hhHHHHHHHHHHHhCCC--CCEEEE
Q 017595 236 FDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG-DAILMKWILHNW-D-DEHCLTLLKNCYEAIPE--NGKIII 301 (369)
Q Consensus 236 ~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~~-~-d~~~~~~L~~~~~~L~p--gG~lli 301 (369)
+|. +.+++.++.. ++++++.+|+.+ +.+.. |+|++.--...- . .++...+.+.+.+.|++ ||.+.|
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 999 8888776542 469999999988 44443 999988543321 1 24455667777777765 888888
Q ss_pred Eec
Q 017595 302 IDR 304 (369)
Q Consensus 302 ~e~ 304 (369)
+..
T Consensus 349 it~ 351 (393)
T 3k0b_A 349 LTS 351 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 765
No 255
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.31 E-value=2.9e-07 Score=85.14 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=72.7
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCCCCCCCCEEEecccccc
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFERIPKGDAILMKWILHN 276 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~~~p~~D~v~~~~vlh~ 276 (369)
....+|||+|||+|.++.. +. ...+++++|. +.+++.+++. ++++++.+|+++.....|+|++...
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP--- 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP--- 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT---
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc---
Confidence 3568999999999999999 76 4678999999 8777766532 5799999999884433499998532
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
.....+++.+.+.|+|||++++.+...
T Consensus 268 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ---TTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ---HhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 112378999999999999999887653
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.29 E-value=2.1e-06 Score=80.52 Aligned_cols=110 Identities=16% Similarity=0.070 Sum_probs=82.0
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC--------------------------------------CeEEE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH--------------------------------------IEGVN 235 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 235 (369)
+..++.... +.+...|||.+||+|.++++.+....+ .++++
T Consensus 183 Aaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 183 AAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 445555444 777889999999999999998876544 56999
Q ss_pred cch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC-CEEEecccccc-C-ChhHHHHHHHHHHHhCCC--CCEEEE
Q 017595 236 FDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG-DAILMKWILHN-W-DDEHCLTLLKNCYEAIPE--NGKIII 301 (369)
Q Consensus 236 ~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~-~-~d~~~~~~L~~~~~~L~p--gG~lli 301 (369)
+|. +.+++.++.. ++++++.+|+.+ +.+.. |+|++.--.+. + ..++...+.+.+.+.||+ |+++.|
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999 8888776542 469999999988 44443 99998855432 2 235667788888888886 898888
Q ss_pred Eec
Q 017595 302 IDR 304 (369)
Q Consensus 302 ~e~ 304 (369)
+..
T Consensus 342 it~ 344 (384)
T 3ldg_A 342 LTN 344 (384)
T ss_dssp EES
T ss_pred EEC
Confidence 765
No 257
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.29 E-value=7.4e-07 Score=84.00 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=71.4
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCCC---CCC-CCEEEeccccc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFER---IPK-GDAILMKWILH 275 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~~---~p~-~D~v~~~~vlh 275 (369)
...+|||+|||+|.++..++.... +++++|+ +.+++.+++. -...+..+|+++. .+. .|+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 468999999999999999998744 4999999 7777766542 1235778998762 233 49998864321
Q ss_pred cCCh-------hHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 276 NWDD-------EHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 276 ~~~d-------~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
.-+. .....+++.+.+.|+|||+|++.....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1111 234588999999999999999776543
No 258
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.28 E-value=4.7e-07 Score=86.69 Aligned_cols=103 Identities=11% Similarity=0.066 Sum_probs=75.2
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-C--CCCC-CEEEec
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-R--IPKG-DAILMK 271 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p~~-D~v~~~ 271 (369)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|..+ + .+.. |+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 455689999999999999999998664 68999999 777766543 2578999999876 2 3343 999873
Q ss_pred c------ccccC-------ChhH-------HHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 272 W------ILHNW-------DDEH-------CLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 272 ~------vlh~~-------~d~~-------~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
- ++..- +.++ ..++|+.+.+.|||||+|+...-..
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 2 23222 1111 2388999999999999998766544
No 259
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.28 E-value=7.6e-07 Score=79.86 Aligned_cols=101 Identities=14% Similarity=0.144 Sum_probs=76.2
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC-----------CCCceEEeCCCCCCCC---C-CCEE
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS-----------YRGVKHIGGNMFERIP---K-GDAI 268 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~p---~-~D~v 268 (369)
+.+++||=||+|.|..+.++++..+..+++.+++ |.+++.+++ .+|++++.+|.+.-+. + .|+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4678999999999999999998877778999999 888886543 3799999999987322 2 2999
Q ss_pred EeccccccCChh--HHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 269 LMKWILHNWDDE--HCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 269 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+.-..=-.-+.+ -...+++.++++|+|||.+++.-..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 865321111110 0247899999999999999887544
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.27 E-value=1.2e-06 Score=79.26 Aligned_cols=83 Identities=13% Similarity=0.229 Sum_probs=61.5
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCC-CCCC--C
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFE-RIPK--G 265 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~--~ 265 (369)
++.+++.+. .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++. .
T Consensus 39 ~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 39 VNKAVESAN-LTKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 345666565 5667899999999999999999983 57778887 666665543 3789999999998 6665 3
Q ss_pred CEEEeccccccCChh
Q 017595 266 DAILMKWILHNWDDE 280 (369)
Q Consensus 266 D~v~~~~vlh~~~d~ 280 (369)
|+|+++.. ++++.+
T Consensus 116 D~Iv~NlP-y~is~p 129 (295)
T 3gru_A 116 NKVVANLP-YQISSP 129 (295)
T ss_dssp SEEEEECC-GGGHHH
T ss_pred cEEEEeCc-ccccHH
Confidence 98886644 334333
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.25 E-value=5.7e-07 Score=82.87 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=70.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--------------CCceEEeCCCCCCC------CC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--------------RGVKHIGGNMFERI------PK 264 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------~rv~~~~~d~~~~~------p~ 264 (369)
.+.+||+||||+|.++.++++..+ .+++.+|+ +.+++.++++ +|++++.+|.++-+ ++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 578999999999999999998766 78999999 8888766431 27999999998721 22
Q ss_pred -CCEEEecccc-cc-CChh--HHHHHHHHH----HHhCCCCCEEEEEec
Q 017595 265 -GDAILMKWIL-HN-WDDE--HCLTLLKNC----YEAIPENGKIIIIDR 304 (369)
Q Consensus 265 -~D~v~~~~vl-h~-~~d~--~~~~~L~~~----~~~L~pgG~lli~e~ 304 (369)
.|+|++-..- .. .... -...+++.+ +++|+|||.+++.-.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 3999886432 10 0010 124556665 999999998887654
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.24 E-value=1.4e-06 Score=81.96 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=80.9
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC--------------------------------------CeEEE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH--------------------------------------IEGVN 235 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 235 (369)
+..++.... +.+..+|||++||+|.++.+++....+ .++++
T Consensus 184 Aa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 184 AAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 344555444 777789999999999999998876432 57999
Q ss_pred cch-hHHHHhCCCC-------CCceEEeCCCCC-CCCCC-CEEEecccccc-CC-hhHHHHHHHHHHHhCCC--CCEEEE
Q 017595 236 FDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIPKG-DAILMKWILHN-WD-DEHCLTLLKNCYEAIPE--NGKIII 301 (369)
Q Consensus 236 ~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p~~-D~v~~~~vlh~-~~-d~~~~~~L~~~~~~L~p--gG~lli 301 (369)
+|. +.+++.++.. +++++..+|+.+ +.+.. |+|++.--... +. .++...+.+.+.+.|++ |+.+.|
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 999 8888877642 379999999988 44443 99999765432 21 24566778888778876 888888
Q ss_pred Eec
Q 017595 302 IDR 304 (369)
Q Consensus 302 ~e~ 304 (369)
+..
T Consensus 343 it~ 345 (385)
T 3ldu_A 343 ITS 345 (385)
T ss_dssp EES
T ss_pred EEC
Confidence 754
No 263
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=4.1e-06 Score=73.67 Aligned_cols=114 Identities=9% Similarity=0.034 Sum_probs=70.1
Q ss_pred HhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchh-HHHHhCCCC----CCceEEeCCCCC-CCCC-
Q 017595 192 IVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLP-HVIQNAPSY----RGVKHIGGNMFE-RIPK- 264 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~----~rv~~~~~d~~~-~~p~- 264 (369)
+.+.++.+... ++...+|||+|||+|.++..++++.+-.+++++|+. ......... .++.....++.. .++.
T Consensus 61 ~KL~ei~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~ 139 (277)
T 3evf_A 61 AKLRWFHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPV 139 (277)
T ss_dssp HHHHHHHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCC
T ss_pred HHHHHHHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCC
Confidence 44556666643 667789999999999999988877654455545542 111111111 134444554422 3433
Q ss_pred -CCEEEeccccc---cCChh-HHHHHHHHHHHhCCCC-CEEEEEeccCC
Q 017595 265 -GDAILMKWILH---NWDDE-HCLTLLKNCYEAIPEN-GKIIIIDRMPM 307 (369)
Q Consensus 265 -~D~v~~~~vlh---~~~d~-~~~~~L~~~~~~L~pg-G~lli~e~~~~ 307 (369)
.|+|++....+ ++.|+ ....+|+.+.+.|+|| |.+++ ..+.|
T Consensus 140 ~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~p 187 (277)
T 3evf_A 140 KCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLAP 187 (277)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCT
T ss_pred CccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecCC
Confidence 39999987665 12122 2235689999999999 99887 55543
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.22 E-value=1.5e-06 Score=77.53 Aligned_cols=90 Identities=14% Similarity=0.080 Sum_probs=62.3
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---CCCceEEeCCCCC-CCCC--CCE
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---YRGVKHIGGNMFE-RIPK--GDA 267 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p~--~D~ 267 (369)
+.+++... .... +|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++. ...
T Consensus 37 ~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~ 112 (271)
T 3fut_A 37 RRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGS 112 (271)
T ss_dssp HHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTE
T ss_pred HHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCcc
Confidence 35555555 5556 99999999999999999986 46777776 666554432 2689999999988 6653 223
Q ss_pred EEeccccccCChhHHHHHHHH
Q 017595 268 ILMKWILHNWDDEHCLTLLKN 288 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~~~L~~ 288 (369)
++..+.-++.+.+-..++|..
T Consensus 113 ~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 113 LLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp EEEEEECSSCCHHHHHHHHHH
T ss_pred EEEecCcccccHHHHHHHhcC
Confidence 445555666766655555554
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.21 E-value=9.4e-07 Score=89.48 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=72.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--------CCceEEeCCCCCC---CCC-CCEEEecc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--------RGVKHIGGNMFER---IPK-GDAILMKW 272 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~rv~~~~~d~~~~---~p~-~D~v~~~~ 272 (369)
...+|||+|||+|.++..++.... .+++++|+ +.+++.+++. ++++++.+|+++. ... .|+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 467999999999999999887543 46999999 7777766531 3799999999872 223 39999854
Q ss_pred c-----------cccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 273 I-----------LHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 273 v-----------lh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
. ++.. .....+++.+.+.|+|||+|++...
T Consensus 618 P~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 2 2222 4566899999999999999986554
No 266
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.16 E-value=4.6e-06 Score=79.81 Aligned_cols=99 Identities=13% Similarity=0.191 Sum_probs=69.3
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCCCC----
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFERIP---- 263 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p---- 263 (369)
+.+++.++ ..+..+|||+|||+|.++..+++. ..+++++|. +.+++.++. .++++++.+|+.+.++
T Consensus 276 ~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~ 352 (433)
T 1uwv_A 276 ARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPW 352 (433)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGG
T ss_pred HHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhh
Confidence 34444444 456679999999999999999987 568999998 777776653 2589999999987332
Q ss_pred -C--CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 264 -K--GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 264 -~--~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
. .|+|++.---.. +..+++.+.+ ++|++.+++.
T Consensus 353 ~~~~fD~Vv~dPPr~g-----~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 353 AKNGFDKVLLDPARAG-----AAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp GTTCCSEEEECCCTTC-----CHHHHHHHHH-HCCSEEEEEE
T ss_pred hcCCCCEEEECCCCcc-----HHHHHHHHHh-cCCCeEEEEE
Confidence 1 399987533222 2245555544 6888776663
No 267
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.15 E-value=2.2e-06 Score=75.73 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=61.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC----CCceEEeCCCCC-CCCC---
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY----RGVKHIGGNMFE-RIPK--- 264 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~rv~~~~~d~~~-~~p~--- 264 (369)
...+++.+. .....+|||||||+|.++. + ++.+..+++++|+ +.+++.+++. ++++++.+|+.+ +++.
T Consensus 10 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l-~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 10 IDSIVSAIN-PQKGQAMVEIGPGLAALTE-P-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHHHC-CCTTCCEEEECCTTTTTHH-H-HHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHH
T ss_pred HHHHHHhcC-CCCcCEEEEECCCCcHHHH-h-hhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhc
Confidence 445556555 5667899999999999999 5 4555444888998 8887766543 589999999987 5432
Q ss_pred ---CCEEEeccccccCChhHHHHHH
Q 017595 265 ---GDAILMKWILHNWDDEHCLTLL 286 (369)
Q Consensus 265 ---~D~v~~~~vlh~~~d~~~~~~L 286 (369)
.+.++..+.-++.+.+-..++|
T Consensus 87 ~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred ccCCceEEEECCCCCccHHHHHHHH
Confidence 2345555555555544444444
No 268
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.14 E-value=6.1e-06 Score=78.56 Aligned_cols=90 Identities=13% Similarity=0.024 Sum_probs=66.1
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC------CCceEEeCCCCCCCC-CCCEEEeccccccC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY------RGVKHIGGNMFERIP-KGDAILMKWILHNW 277 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~ 277 (369)
+..+|||+|||+|.++..+++.. .+++++|. +.+++.+++. + ++++.+|+++..+ ..|+|++.-.-...
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGL 366 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCS
T ss_pred CCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccch
Confidence 56799999999999999999873 57899998 7777766542 3 8999999988443 34999985442222
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
. ..+++.+. .|+|||.+++..
T Consensus 367 ~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 367 H----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp C----HHHHHHHH-HHCCSEEEEEES
T ss_pred H----HHHHHHHH-hcCCCcEEEEEC
Confidence 1 23555554 489999888753
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.10 E-value=7.9e-07 Score=79.80 Aligned_cols=68 Identities=16% Similarity=0.230 Sum_probs=53.0
Q ss_pred HHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCC--CeEEEcch-hHHHHhCCC--CCCceEEeCCCCC-CCC
Q 017595 195 NRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPH--IEGVNFDL-PHVIQNAPS--YRGVKHIGGNMFE-RIP 263 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~~p 263 (369)
+.+++.+. .....+|||||||+|.++..++++.+. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 32 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 32 DAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred HHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 34555555 566789999999999999999998764 45888888 777776654 3689999999988 554
No 270
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=98.09 E-value=6.5e-05 Score=68.82 Aligned_cols=143 Identities=12% Similarity=0.119 Sum_probs=103.3
Q ss_pred CcceEEEEcCChhHHHHHHHHh-CCCCeEEEcchhHHHHhCC-----------------------------CCCCceEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSR-YPHIEGVNFDLPHVIQNAP-----------------------------SYRGVKHIG 255 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~~~~~~~a~-----------------------------~~~rv~~~~ 255 (369)
+...||-+|||.=....++... .++++++.+|.|.+++.-+ ..++..++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4679999999999999998876 4689999999998876311 136789999
Q ss_pred CCCCC--CC---------CC-C-CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhh
Q 017595 256 GNMFE--RI---------PK-G-DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMT 322 (369)
Q Consensus 256 ~d~~~--~~---------p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~ 322 (369)
.|+.+ .+ .. . -++++-.+|.+++.++...+|+.+.+... +|.+++.|.+.+.++ +...+
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~-------fg~~M 241 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDR-------FGQIM 241 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSH-------HHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCH-------HHHHH
Confidence 99976 22 21 1 57888899999999999999999999875 566778898865431 11111
Q ss_pred hHHHHHhhcCC------ccCCHHHHHHHHHHcCCcceeEEEe
Q 017595 323 DIIMLMQFSGG------RERTTQEFMALANEAGFNGVNYECF 358 (369)
Q Consensus 323 d~~~~~~~~~~------~~~t~~e~~~ll~~aGf~~~~~~~~ 358 (369)
--.+. ..|. ...+.++..++|.++||+.+++..+
T Consensus 242 ~~~l~--~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 242 IENLR--RRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHH--TTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHH--HhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 10111 1111 2247789999999999998877654
No 271
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.04 E-value=3e-06 Score=75.02 Aligned_cols=67 Identities=9% Similarity=0.236 Sum_probs=52.4
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCC-CCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFE-RIP 263 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p 263 (369)
...+++.+. .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 18 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 18 LQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred HHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 345555555 5667899999999999999999886 57888888 777766543 3789999999998 554
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.04 E-value=3.9e-06 Score=74.31 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=79.9
Q ss_pred CcceEEEEcCChhHHHHHHHHh-------CCC-----CeEEEcch-h---HHHHhC------------------------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSR-------YPH-----IEGVNFDL-P---HVIQNA------------------------ 245 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~-------~p~-----~~~~~~D~-~---~~~~~a------------------------ 245 (369)
+..+|||||+|+|..+..+++. .|+ ++++.++. | ..+..+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988886654 674 57888886 4 211110
Q ss_pred -------CCCCCceEEeCCCCC---CCCC-----CCEEEecc-ccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCC
Q 017595 246 -------PSYRGVKHIGGNMFE---RIPK-----GDAILMKW-ILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVT 309 (369)
Q Consensus 246 -------~~~~rv~~~~~d~~~---~~p~-----~D~v~~~~-vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~ 309 (369)
....+++++.+|+.+ ..+. .|+|++-. .-..-|+--...+|+.+++.|+|||+|+....
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa----- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS----- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC-----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC-----
Confidence 011357899999866 2332 39988742 11111110134789999999999998884110
Q ss_pred CcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEEEecCceeEEEE
Q 017595 310 PEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYECFVCNFCIIEF 367 (369)
Q Consensus 310 ~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~ 367 (369)
...++..|.++||++.++...+..--++.+
T Consensus 215 ----------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a 244 (257)
T 2qy6_A 215 ----------------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCG 244 (257)
T ss_dssp ----------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred ----------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence 013566778899997765444433334443
No 273
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.89 E-value=1.7e-05 Score=69.95 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=71.3
Q ss_pred hhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCC-ceEEeC-CCCCCC
Q 017595 190 TSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRG-VKHIGG-NMFERI 262 (369)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~r-v~~~~~-d~~~~~ 262 (369)
+.+.+.++.+++. +....+|||+|||.|.++...++..+-.+++++|+ ......+.. ..+ +.+... |+.. +
T Consensus 75 AAfKL~ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~-l 152 (282)
T 3gcz_A 75 GSAKLRWMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFN-M 152 (282)
T ss_dssp HHHHHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGG-S
T ss_pred HHHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhh-c
Confidence 3445667777774 77778999999999999999888776666777776 222111111 112 233322 4332 3
Q ss_pred C-C-CCEEEeccccc----cCChhHHHHHHHHHHHhCCCC--CEEEEE
Q 017595 263 P-K-GDAILMKWILH----NWDDEHCLTLLKNCYEAIPEN--GKIIII 302 (369)
Q Consensus 263 p-~-~D~v~~~~vlh----~~~d~~~~~~L~~~~~~L~pg--G~lli~ 302 (369)
+ . .|+|++-...+ ..+......+|+-+.+.|+|| |.+++-
T Consensus 153 ~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 153 EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 3 2 39999887766 111112235788889999999 988874
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.85 E-value=1e-05 Score=73.25 Aligned_cols=78 Identities=22% Similarity=0.237 Sum_probs=60.2
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC-----CCceEEeCCCCC-C--CC-
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY-----RGVKHIGGNMFE-R--IP- 263 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~rv~~~~~d~~~-~--~p- 263 (369)
.+.+++.+. .....+|||+|||+|..+..+++++|+.+++++|. +.+++.+++. ++++++.+|+.+ + ++
T Consensus 15 l~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 15 VREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 345555555 55678999999999999999999999889999999 8888766532 689999999866 2 11
Q ss_pred ----CCCEEEecc
Q 017595 264 ----KGDAILMKW 272 (369)
Q Consensus 264 ----~~D~v~~~~ 272 (369)
..|.|++..
T Consensus 94 ~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 94 LGIEKVDGILMDL 106 (301)
T ss_dssp TTCSCEEEEEEEC
T ss_pred cCCCCCCEEEEcC
Confidence 238887643
No 275
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.82 E-value=0.00011 Score=66.72 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=95.2
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCC---------CCCCceEEeCCCCCCCC----------CC-
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAP---------SYRGVKHIGGNMFERIP----------KG- 265 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~---------~~~rv~~~~~d~~~~~p----------~~- 265 (369)
+...||++|||-=.....+.. .++++++.+|.|.+++..+ ..++..++..|+.+.+. ..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 457899999998887666642 2358999999998877533 23678999999986321 11
Q ss_pred CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhh-hHH-HHH-----hhcCCcc-CC
Q 017595 266 DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMT-DII-MLM-----QFSGGRE-RT 337 (369)
Q Consensus 266 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~-d~~-~~~-----~~~~~~~-~t 337 (369)
-++++..+||++++++...+|+.+.+.+.||+.|++ |.+.++.... ........ ... ... ....... ++
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~-d~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 257 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV-ETSPLHGDEW--REQMQLRFRRVSDALGFEQAVDVQELIYHDE 257 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE-ECCCTTCSHH--HHHHHHHHHHHHC-----------CCTTCCT
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE-EecCCCCcch--hHHHHHHHHHHHHHcCCcCCCCccccccCCC
Confidence 578899999999999999999999999999887664 5554432111 00000000 000 000 0001122 25
Q ss_pred -HHHHHHHHHHcCCcce
Q 017595 338 -TQEFMALANEAGFNGV 353 (369)
Q Consensus 338 -~~e~~~ll~~aGf~~~ 353 (369)
.++..++|.+.||+.+
T Consensus 258 ~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 258 NRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TCCCHHHHHTTTTEEEE
T ss_pred ChHHHHHHHHHCcCccc
Confidence 7899999999999987
No 276
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.80 E-value=2.9e-05 Score=68.80 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=66.6
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-h-------HHHHhCCCC-------CCceEEeCCCCCC---CC--
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-P-------HVIQNAPSY-------RGVKHIGGNMFER---IP-- 263 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-------~~~~~a~~~-------~rv~~~~~d~~~~---~p-- 263 (369)
.....+|||+|||+|..+..++.. ..+++++|. + ..++.++.. .+++++.+|+.+. ++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 344579999999999999999986 468999998 7 666666532 4699999998762 33
Q ss_pred -C-CCEEEeccccccCCh------------------hHHHHHHHHHHHhCCCCCEEEEEeccC
Q 017595 264 -K-GDAILMKWILHNWDD------------------EHCLTLLKNCYEAIPENGKIIIIDRMP 306 (369)
Q Consensus 264 -~-~D~v~~~~vlh~~~d------------------~~~~~~L~~~~~~L~pgG~lli~e~~~ 306 (369)
. .|+|++.-.+++-.. .+...+++.+.+..+ .+++|..+..
T Consensus 159 ~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~--~~vvvk~p~~ 219 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAK--KRVVVKRPRL 219 (258)
T ss_dssp HCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred CCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcC--cEEEEEcCCC
Confidence 3 399999766654321 123455566666643 3666666543
No 277
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.79 E-value=7.4e-06 Score=76.65 Aligned_cols=88 Identities=13% Similarity=0.065 Sum_probs=63.1
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCCC---CC-------------
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFER---IP------------- 263 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~---~p------------- 263 (369)
..+|||+|||+|.++..+++.. .+++++|. +.+++.+++ .++++++.+|+.+. ++
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 3689999999999999988754 47899998 777776653 25899999998651 11
Q ss_pred ---CCCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 264 ---KGDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 264 ---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
..|+|++.---. .+.+++.+.|+|+|+++.+..
T Consensus 292 ~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEES
T ss_pred ccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEEC
Confidence 238887643211 234556667778998887753
No 278
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.78 E-value=1.3e-05 Score=75.04 Aligned_cols=91 Identities=10% Similarity=-0.019 Sum_probs=69.3
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---------------------CCCceEEeCCCCCC---
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---------------------YRGVKHIGGNMFER--- 261 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------------~~rv~~~~~d~~~~--- 261 (369)
..+|||+|||+|..+..++.+.+..+++++|. +..++.+++ ..+++++.+|+.+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 57999999999999999999988888999999 777665432 12388999998662
Q ss_pred CCC-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 262 IPK-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 262 ~p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
.+. .|+|++.- .. ....+|..+.+.|+|||.+++..
T Consensus 128 ~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 233 39988542 11 12478999999999999877764
No 279
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.72 E-value=7.9e-05 Score=67.73 Aligned_cols=101 Identities=9% Similarity=0.030 Sum_probs=67.5
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCC------CCCceEEeCCCCC-CC--C---CCCEEE
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPS------YRGVKHIGGNMFE-RI--P---KGDAIL 269 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~--p---~~D~v~ 269 (369)
.....+|||+|||+|..+..+++.. +..+++.+|. +..++.+++ ..+++++.+|+.+ +. + ..|.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4456899999999999999999885 5678999998 777665543 2579999999876 22 1 238888
Q ss_pred ec------cccccCCh---------hH-------HHHHHHHHHHhCCCCCEEEEEecc
Q 017595 270 MK------WILHNWDD---------EH-------CLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 270 ~~------~vlh~~~d---------~~-------~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
+. .++...+| ++ -.++|+.+.+.++ ||+|+...-.
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 62 22322111 11 1357888888776 8877765443
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.71 E-value=5.6e-05 Score=76.49 Aligned_cols=110 Identities=13% Similarity=-0.017 Sum_probs=75.1
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC------------------------------------------CCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY------------------------------------------PHI 231 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~------------------------------------------p~~ 231 (369)
+..++.... +....+|||.+||+|.++++.+... ++.
T Consensus 179 Aa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 179 AAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 344555444 7777899999999999999877652 346
Q ss_pred eEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-CCC----CCCEEEecccccc-C-ChhHHHHHHHHHHHh---C
Q 017595 232 EGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-RIP----KGDAILMKWILHN-W-DDEHCLTLLKNCYEA---I 293 (369)
Q Consensus 232 ~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~~p----~~D~v~~~~vlh~-~-~d~~~~~~L~~~~~~---L 293 (369)
+++++|. +.+++.|+.. +.+++..+|+.+ ..| ..|+|+++--... + .+++...+.+.+.+. +
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 7999999 8888776542 458999999987 223 2399998844321 1 223444555554444 4
Q ss_pred CCCCEEEEEec
Q 017595 294 PENGKIIIIDR 304 (369)
Q Consensus 294 ~pgG~lli~e~ 304 (369)
.|||++.|+..
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 58999998754
No 281
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.67 E-value=2.6e-05 Score=76.57 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=72.1
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCC------------------CCeEEEcch-hHHHHhCCC------CCC-----ceE
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYP------------------HIEGVNFDL-PHVIQNAPS------YRG-----VKH 253 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p------------------~~~~~~~D~-~~~~~~a~~------~~r-----v~~ 253 (369)
.....+|+|.+||+|.++..+.+... ..+++++|+ +.++..|+. ... +.+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 34557999999999999988876532 236889998 766665432 233 789
Q ss_pred EeCCCCC-C-CC--CCCEEEeccccccCCh------------hHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 254 IGGNMFE-R-IP--KGDAILMKWILHNWDD------------EHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 254 ~~~d~~~-~-~p--~~D~v~~~~vlh~~~d------------~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
..+|.+. + .+ ..|+|+++-.+..... .....+++++.+.|+|||++.++-+
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 9999987 3 22 3499998765543211 1234789999999999999998753
No 282
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.63 E-value=0.00021 Score=63.37 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=68.6
Q ss_pred hHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchh-HHHHhCCC----CCC-ceEEeC-CCCCCCC
Q 017595 191 SIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLP-HVIQNAPS----YRG-VKHIGG-NMFERIP 263 (369)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~----~~r-v~~~~~-d~~~~~p 263 (369)
.+.+.++.+. .-+....+|||+||++|.++..++++.+-..++++|+. ........ ..+ +.+..+ |++.-.+
T Consensus 67 a~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~ 145 (300)
T 3eld_A 67 AAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPT 145 (300)
T ss_dssp HHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCC
T ss_pred HHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCC
Confidence 3445566666 44667789999999999999999987655567777762 21111110 112 233333 4443122
Q ss_pred C-CCEEEeccccccCCh-----hHHHHHHHHHHHhCCCC-CEEEEE
Q 017595 264 K-GDAILMKWILHNWDD-----EHCLTLLKNCYEAIPEN-GKIIII 302 (369)
Q Consensus 264 ~-~D~v~~~~vlh~~~d-----~~~~~~L~~~~~~L~pg-G~lli~ 302 (369)
. .|+|++...-+ -.. .....+|+-+.+.|+|| |.+++-
T Consensus 146 ~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 146 EPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 2 39999876655 221 11246788889999999 998875
No 283
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.56 E-value=2.4e-05 Score=73.36 Aligned_cols=92 Identities=9% Similarity=-0.021 Sum_probs=70.1
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCC-CeEEEcch-hHHHHhCCCC-------CC-ceEEeCCCCC--C--CCC-CCEEEe
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPH-IEGVNFDL-PHVIQNAPSY-------RG-VKHIGGNMFE--R--IPK-GDAILM 270 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-------~r-v~~~~~d~~~--~--~p~-~D~v~~ 270 (369)
+..+|||++||+|.++..++.+.++ .+++.+|. +..++.+++. ++ ++++.+|.++ . .+. .|+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4579999999999999999998765 47899999 7777765531 34 9999999865 2 223 399987
Q ss_pred ccccccCChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 271 KWILHNWDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
.- +.. ...+++.+.+.|+|||.|++..
T Consensus 132 DP--~g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP--FGT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC--SSC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CcC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 65 211 2358999999999999877765
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.55 E-value=0.00032 Score=64.63 Aligned_cols=96 Identities=11% Similarity=0.013 Sum_probs=67.3
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCCCCC-CCCC--CEEEeccccccCChh
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFER-IPKG--DAILMKWILHNWDDE 280 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~-~p~~--D~v~~~~vlh~~~d~ 280 (369)
+....++||+||++|.++..++++ +.+++++|...+.......++|+++.+|.+.. .+.. |+|++-.+.+ ..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~ 283 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PA 283 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---hH
Confidence 346789999999999999999987 57899999855544445568999999999983 3333 9999888753 23
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEec
Q 017595 281 HCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 281 ~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
....++.+.......++.++....
T Consensus 284 ~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 284 KVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred HhHHHHHHHHhccccceEEEEEEe
Confidence 344444444444444455554444
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.54 E-value=0.00019 Score=72.23 Aligned_cols=100 Identities=11% Similarity=0.028 Sum_probs=68.5
Q ss_pred CCcceEEEEcCChhHHHHHHHHhCC---CCeEEEcch-hHHHHhC------CC------CCCceEEeCCCCCCC--C--C
Q 017595 205 EQIKQLVDVGGGLGVTLNIITSRYP---HIEGVNFDL-PHVIQNA------PS------YRGVKHIGGNMFERI--P--K 264 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~a------~~------~~rv~~~~~d~~~~~--p--~ 264 (369)
....+|||.|||+|.++..+++..+ ..+++++|+ +.+++.+ .. .....+...|++.+. + .
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3567999999999999999998876 357889998 6655544 11 123456666776621 2 2
Q ss_pred CCEEEecccccc-CC-hh-------------------------HHHHHHHHHHHhCCCCCEEEEEec
Q 017595 265 GDAILMKWILHN-WD-DE-------------------------HCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 265 ~D~v~~~~vlh~-~~-d~-------------------------~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.|+|+++--.-. .. +. -...+++.+.+.|+|||++.++-+
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 399998755411 11 11 123478899999999999988765
No 286
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.46 E-value=0.00037 Score=60.46 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=68.4
Q ss_pred hhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHh--CCCCeE--EEcchhHHHHhCCCCCCc---eEEeC-CCCCC
Q 017595 190 TSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR--YPHIEG--VNFDLPHVIQNAPSYRGV---KHIGG-NMFER 261 (369)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~--~p~~~~--~~~D~~~~~~~a~~~~rv---~~~~~-d~~~~ 261 (369)
+.+.+.++-+++ -++...+|||+||+.|.++...+++ ...+++ ++.|+ ..........++ .+..+ ||++.
T Consensus 58 AayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~ 135 (269)
T 2px2_A 58 GTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYK 135 (269)
T ss_dssp HHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGS
T ss_pred HHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCC
Confidence 344566777775 4788899999999999999998876 222122 44442 111111111455 45547 99873
Q ss_pred CCC-CCEEEeccccccCC----hhH-HHHHHHHHHHhCCCCC-EEEEEec
Q 017595 262 IPK-GDAILMKWILHNWD----DEH-CLTLLKNCYEAIPENG-KIIIIDR 304 (369)
Q Consensus 262 ~p~-~D~v~~~~vlh~~~----d~~-~~~~L~~~~~~L~pgG-~lli~e~ 304 (369)
-+. .|+|++-..=. -+ |+. ...+|.-+.+.|+||| .+++--+
T Consensus 136 ~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 136 PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 333 49998765432 11 111 2235777789999999 8887433
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.42 E-value=8.5e-05 Score=68.72 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=70.7
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCC--------------CCceEEeCCCCCCC------C-
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSY--------------RGVKHIGGNMFERI------P- 263 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------~rv~~~~~d~~~~~------p- 263 (369)
.+++||=||+|.|..+.++++. |..+++.+|+ |.+++.++++ +|++++.+|...-+ .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999999975 4578999999 8888865431 56899999987521 1
Q ss_pred CCCEEEecccccc-------CC-hhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 264 KGDAILMKWILHN-------WD-DEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 264 ~~D~v~~~~vlh~-------~~-d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
..|+|+.--.=.. .. ..-.+.+++.++++|+|||.++..-.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 2399986532110 00 01135789999999999998887643
No 288
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.42 E-value=3.6e-05 Score=87.93 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=64.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCC-----CeEEEcch-hHHHHhCCCC-C--CceEEeCCCCCC---CCC-CCEEEecc
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPH-----IEGVNFDL-PHVIQNAPSY-R--GVKHIGGNMFER---IPK-GDAILMKW 272 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~~-~--rv~~~~~d~~~~---~p~-~D~v~~~~ 272 (369)
...+||+||+|+|..+..+++...+ .+++.-|. +...+.+++. . .+.....|..++ .+. .|+|+..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 3579999999999877776665432 25666676 5555555433 1 122222233222 223 39999999
Q ss_pred ccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcc
Q 017595 273 ILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNG 352 (369)
Q Consensus 273 vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 352 (369)
+||.. .+....|+++++.|||||++++.+...... +.......-......+...+.++|.++|.++||+.
T Consensus 1320 vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~--------~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~ 1389 (2512)
T 2vz8_A 1320 ALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGHP--------LGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHL 1389 (2512)
T ss_dssp C----------------------CCEEEEEEC----------------------------------CTTTTSSTTTTEEE
T ss_pred ccccc--ccHHHHHHHHHHhcCCCcEEEEEecccccc--------ccccccccccccccCCcccCHHHHHHHHHhCCCce
Confidence 99976 345678999999999999999988642110 00000000000000123457788999999999998
Q ss_pred eeEEE
Q 017595 353 VNYEC 357 (369)
Q Consensus 353 ~~~~~ 357 (369)
+....
T Consensus 1390 ~~~~~ 1394 (2512)
T 2vz8_A 1390 VALKR 1394 (2512)
T ss_dssp EEEEE
T ss_pred eeecc
Confidence 76643
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.39 E-value=7.8e-05 Score=73.09 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=67.4
Q ss_pred ceEEEEcCChhHHHHHHHHhCC---------------CCeEEEcch-hHHHHhCCCC-------CCceEEeCCCCC-C-C
Q 017595 208 KQLVDVGGGLGVTLNIITSRYP---------------HIEGVNFDL-PHVIQNAPSY-------RGVKHIGGNMFE-R-I 262 (369)
Q Consensus 208 ~~vLDvG~G~G~~~~~l~~~~p---------------~~~~~~~D~-~~~~~~a~~~-------~rv~~~~~d~~~-~-~ 262 (369)
.+|+|.+||+|.++..+.+..+ ..+++++|+ +.+...|+.. .++.+..+|.+. + .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999988765432 467899999 7776655421 235558888876 3 2
Q ss_pred CC--CCEEEecccccc--CChh-------------------------HHHHHHHHHHHhCCCCCEEEEEec
Q 017595 263 PK--GDAILMKWILHN--WDDE-------------------------HCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 263 p~--~D~v~~~~vlh~--~~d~-------------------------~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
+. .|+|+++--+.. |..+ .-..+++.+.+.|+|||++.++-+
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 32 399998644432 2111 112589999999999999888753
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.37 E-value=0.0011 Score=52.40 Aligned_cols=85 Identities=15% Similarity=0.114 Sum_probs=58.3
Q ss_pred CcceEEEEcCChh-HHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCCCC----CCCEEEeccccccCCh
Q 017595 206 QIKQLVDVGGGLG-VTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFERIP----KGDAILMKWILHNWDD 279 (369)
Q Consensus 206 ~~~~vLDvG~G~G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p----~~D~v~~~~vlh~~~d 279 (369)
...++||||||.| ..+..|++. .+..+++.|+ |..++ ++..|+|++.. ..|+|...+ |+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsir-----PP 99 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIR-----PP 99 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEES-----CC
T ss_pred CCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcC-----CC
Confidence 4579999999999 588888764 3577888887 54333 89999999654 349987665 33
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 280 EHCLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 280 ~~~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
.+....+.++++.. |.-++|.-...+
T Consensus 100 ~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 100 AEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp TTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred HHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 44445555555543 566777655443
No 291
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.31 E-value=5.9e-05 Score=66.61 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=52.0
Q ss_pred cCCc--ceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHH-------HHhCCC-------C-CCceEEeCCCCC---CC
Q 017595 204 FEQI--KQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHV-------IQNAPS-------Y-RGVKHIGGNMFE---RI 262 (369)
Q Consensus 204 ~~~~--~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~-------~~~a~~-------~-~rv~~~~~d~~~---~~ 262 (369)
..+. .+|||+|||+|..+..++.+ +.+++++|. +.+ ++.++. . .+++++.+|..+ .+
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~ 161 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI 161 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC
Confidence 4444 79999999999999999998 457999998 543 332211 1 479999999875 23
Q ss_pred CC-CCEEEecccccc
Q 017595 263 PK-GDAILMKWILHN 276 (369)
Q Consensus 263 p~-~D~v~~~~vlh~ 276 (369)
+. .|+|++.-.+++
T Consensus 162 ~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPH 176 (258)
T ss_dssp SSCCSEEEECCCCCC
T ss_pred cccCCEEEEcCCCCC
Confidence 33 399999877765
No 292
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.19 E-value=0.003 Score=63.93 Aligned_cols=144 Identities=12% Similarity=0.080 Sum_probs=103.4
Q ss_pred CcceEEEEcCChhHHHHHHHHhCC--------CCeEEEcchhHHHHhCCC------------------------------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYP--------HIEGVNFDLPHVIQNAPS------------------------------ 247 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p--------~~~~~~~D~~~~~~~a~~------------------------------ 247 (369)
+...||-+|||.=....+|...+| +++++.+|.|.+++.-++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 468999999999999999988766 789999999988763111
Q ss_pred CCCceEEeCCCCC--CC----------CCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcch
Q 017595 248 YRGVKHIGGNMFE--RI----------PKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEAT 313 (369)
Q Consensus 248 ~~rv~~~~~d~~~--~~----------p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~ 313 (369)
.++..++..|+.+ .+ ... -++++--+|.+++.++..++|+.+.+ + |++.+++.|.+.+..+...
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSH
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCCh
Confidence 0378999999987 21 222 57888899999999999999999985 4 6888999998876533222
Q ss_pred HHHhhhhhhhHHHHHhhcC------CccCCHHHHHHHHHHcCCcceeEEE
Q 017595 314 AAAREASMTDIIMLMQFSG------GRERTTQEFMALANEAGFNGVNYEC 357 (369)
Q Consensus 314 ~~~~~~~~~d~~~~~~~~~------~~~~t~~e~~~ll~~aGf~~~~~~~ 357 (369)
+...+--.+. ..+ ....+.++..+.|.+.||+.+....
T Consensus 265 ----f~~~m~~~~~--~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 265 ----FSKQMLAHFK--RNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGD 308 (695)
T ss_dssp ----HHHHHHHHHH--HTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEE
T ss_pred ----HHHHHHHHHH--HcCCCCCccccCCCHHHHHHHHHHCCCCCcceee
Confidence 1121111111 001 1234799999999999998776654
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.18 E-value=0.0023 Score=54.65 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=76.4
Q ss_pred hHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHh---CCCC--CCceEEeC-CCCC-CC
Q 017595 191 SIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQN---APSY--RGVKHIGG-NMFE-RI 262 (369)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~---a~~~--~rv~~~~~-d~~~-~~ 262 (369)
.+.+.++.+.+. ++...+|||+||++|.++...+....-.+++++|. +.-.+. .+.+ +.|+|..+ |++. +.
T Consensus 64 ~~KL~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 64 SAKLQWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC
T ss_pred HHHHHHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC
Confidence 345667777774 77778999999999999998887765557899998 322211 1112 67999999 9765 22
Q ss_pred CCCCEEEeccccccCChhH-----HHHHHHHHHHhCCCCCEEEEEeccCCCC
Q 017595 263 PKGDAILMKWILHNWDDEH-----CLTLLKNCYEAIPENGKIIIIDRMPMVT 309 (369)
Q Consensus 263 p~~D~v~~~~vlh~~~d~~-----~~~~L~~~~~~L~pgG~lli~e~~~~~~ 309 (369)
...|+|+|-..=.. +.+. ..++|+-+.++|++ |-++| -.+.+..
T Consensus 143 ~~~DtllcDIgeSs-~~~~vE~~RtlrvLela~~wL~~-~~fc~-KVl~py~ 191 (267)
T 3p8z_A 143 EKCDTLLCDIGESS-PSPTVEESRTIRVLKMVEPWLKN-NQFCI-KVLNPYM 191 (267)
T ss_dssp CCCSEEEECCCCCC-SCHHHHHHHHHHHHHHHGGGCSS-CEEEE-EESCCCS
T ss_pred ccccEEEEecCCCC-CChhhhhhHHHHHHHHHHHhccc-CCEEE-EEccCCC
Confidence 22498887654322 2211 23577777899999 66766 4454543
No 294
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=97.17 E-value=0.00034 Score=53.11 Aligned_cols=65 Identities=14% Similarity=0.202 Sum_probs=55.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhC--CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhcCC
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQM--PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVLNQ 125 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~--~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~~~ 125 (369)
.+..|++.|... |+.|+.+||+.+ ++ .+..+++.|+.|...|+|... ..+.|++|+.+..++...
T Consensus 14 ~d~~IL~~L~~~---g~~s~~eLA~~l~~gi----S~~aVs~rL~~Le~~GLV~~~------~rg~Y~LT~~G~~~l~~~ 80 (111)
T 3b73_A 14 WDDRILEIIHEE---GNGSPKELEDRDEIRI----SKSSVSRRLKKLADHDLLQPL------ANGVYVITEEGEAYLNGE 80 (111)
T ss_dssp HHHHHHHHHHHH---SCBCHHHHHTSTTCCS----CHHHHHHHHHHHHHTTSEEEC------STTCEEECHHHHHHHTTC
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHhcCC----CHHHHHHHHHHHHHCCCEEec------CCceEEECchHHHHHHHH
Confidence 356788889775 499999999999 99 999999999999999999874 345999999999777653
No 295
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.17 E-value=0.00054 Score=67.03 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=71.1
Q ss_pred CcceEEEEcCChhHHHHHHHHhC---CCCeEEEcch-hHHHHhCCC------C--CCceEEeCCCCC-CCC---C--CCE
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRY---PHIEGVNFDL-PHVIQNAPS------Y--RGVKHIGGNMFE-RIP---K--GDA 267 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~------~--~rv~~~~~d~~~-~~p---~--~D~ 267 (369)
...+|+|.+||+|.++..+.+.. +..+++++|+ +.+...++. . +++.+..+|.+. ++| . .|+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999999998885 3578899998 766665542 1 467899999987 443 1 399
Q ss_pred EEeccccc-cCChh--------------------HHHHHHHHHHHhCC-CCCEEEEEec
Q 017595 268 ILMKWILH-NWDDE--------------------HCLTLLKNCYEAIP-ENGKIIIIDR 304 (369)
Q Consensus 268 v~~~~vlh-~~~d~--------------------~~~~~L~~~~~~L~-pgG~lli~e~ 304 (369)
|+++--+. .|... .-..+++.+.+.|+ |||++.++-+
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 99763321 11100 01248999999999 9999988754
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.16 E-value=0.0025 Score=56.29 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=74.4
Q ss_pred HhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHh---CCCC--CCceEEeC-CCCC-CCC
Q 017595 192 IVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQN---APSY--RGVKHIGG-NMFE-RIP 263 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~---a~~~--~rv~~~~~-d~~~-~~p 263 (369)
+.+.++.+.+. +....+|||+||++|.++...+....-.+++++|+ ..-.+. .+.. .-|.++.+ |++. +..
T Consensus 81 ~KL~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~ 159 (321)
T 3lkz_A 81 AKLRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSE 159 (321)
T ss_dssp HHHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCC
T ss_pred HHHHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCC
Confidence 44567777655 67778999999999999998777765557899998 321110 1111 34888888 8766 222
Q ss_pred CCCEEEeccccccCChhH-----HHHHHHHHHHhCCCC-CEEEEEeccCCC
Q 017595 264 KGDAILMKWILHNWDDEH-----CLTLLKNCYEAIPEN-GKIIIIDRMPMV 308 (369)
Q Consensus 264 ~~D~v~~~~vlh~~~d~~-----~~~~L~~~~~~L~pg-G~lli~e~~~~~ 308 (369)
..|+|++--. ..-+.+. ..++|+-+.++|++| |-++| -.+.+.
T Consensus 160 ~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl~pY 208 (321)
T 3lkz_A 160 CCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVLCPY 208 (321)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EESCTT
T ss_pred CCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEcCCC
Confidence 2488887655 3333322 235777788999998 77776 444443
No 297
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.13 E-value=0.0011 Score=59.11 Aligned_cols=94 Identities=20% Similarity=0.136 Sum_probs=65.1
Q ss_pred CcceEEEEcCChhHHHHHHHHhC-----CCCeEEEcch-hH------------------------------HHH---hCC
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRY-----PHIEGVNFDL-PH------------------------------VIQ---NAP 246 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~------------------------------~~~---~a~ 246 (369)
.+++|||||+..|..+..++... ++-+++++|. .. +.+ .+.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 46899999999999988877654 4778888873 11 111 111
Q ss_pred C-CCCceEEeCCCCCC---CCCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 247 S-YRGVKHIGGNMFER---IPKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 247 ~-~~rv~~~~~d~~~~---~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
- .++|+++.||+.+. ++.. |+|++-.-.+ +.....|+.+.+.|+|||.|++-|
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 1 27899999999763 3322 7777765321 345688999999999999666544
No 298
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.11 E-value=0.0012 Score=55.75 Aligned_cols=88 Identities=9% Similarity=0.061 Sum_probs=59.6
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC---------CCCceEEeCCCCCC--------------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS---------YRGVKHIGGNMFER-------------- 261 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~rv~~~~~d~~~~-------------- 261 (369)
+..+||||||| ..+..+++ .++.+++.+|. +...+.+++ .++|+++.+|..+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 46799999985 56666665 45778888887 666555432 35799999996431
Q ss_pred ----------CC--C-CCEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 262 ----------IP--K-GDAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 262 ----------~p--~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.+ . .|+|+.-.- .....+..+.+.|+|||.|+ .|.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~Iv-~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTLL-FDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEEE-ETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEEE-EeC
Confidence 12 2 399987652 12355666779999999775 554
No 299
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=96.95 E-value=0.00039 Score=47.68 Aligned_cols=55 Identities=13% Similarity=0.301 Sum_probs=45.6
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
+..|++.|...+ .+++..+||+.+|+ +...+.+.|..|...|+|... ..++|+++
T Consensus 12 ~~~IL~~L~~~~--~~~s~~eLA~~lgl----sr~tv~~~l~~L~~~G~I~~~------~~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDG--GPVAIFQLVKKCQV----PKKTLNQVLYRLKKEDRVSSP------SPKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHC--SCEEHHHHHHHHCS----CHHHHHHHHHHHHHTTSEEEE------ETTEEEEC
T ss_pred HHHHHHHHHHcC--CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCcEecC------CCceEeeC
Confidence 456888887642 48999999999999 999999999999999998753 35788764
No 300
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=96.86 E-value=0.0015 Score=46.49 Aligned_cols=66 Identities=15% Similarity=0.284 Sum_probs=50.2
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchh
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKY 120 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~ 120 (369)
-.+..|++.|.+.+|+.++|+.+||+++|+ ...-+.+.|.-|...|+|.... ...++|...+....
T Consensus 10 ~~~~~IL~~L~~~~pg~~~t~~eLA~~Lgv----sr~tV~~~L~~Le~~G~I~~~g----~~~~~W~i~~~~~~ 75 (81)
T 1qbj_A 10 DQEQRILKFLEELGEGKATTAHDLSGKLGT----PKKEINRVLYSLAKKGKLQKEA----GTPPLWKIAVSTQA 75 (81)
T ss_dssp HHHHHHHHHHHHHCTTCCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEES----SSSCEEEEC-----
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEecC----CCCCeeEEeCcHHh
Confidence 346678888988755558999999999999 8999999999999999998642 23578888766543
No 301
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=96.82 E-value=0.00081 Score=49.61 Aligned_cols=61 Identities=11% Similarity=0.186 Sum_probs=50.6
Q ss_pred HHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 43 SMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 43 ~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
++..-.++.|+..| . ++.++.+||+.+++ .+.-+.+.|+.|...|++... . +.|.+++.+.
T Consensus 27 ~l~~~~r~~Il~~L-~----~~~~~~eLa~~l~i----s~~tv~~~L~~L~~~Glv~~~------~-g~y~l~~~g~ 87 (96)
T 1y0u_A 27 AVTNPVRRKILRML-D----KGRSEEEIMQTLSL----SKKQLDYHLKVLEAGFCIERV------G-ERWVVTDAGK 87 (96)
T ss_dssp HHSCHHHHHHHHHH-H----TTCCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE------T-TEEEECTTTC
T ss_pred HhCCHHHHHHHHHH-c----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE------C-CEEEECCCch
Confidence 34445567788888 5 48999999999999 999999999999999999875 3 5888887654
No 302
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.79 E-value=0.00065 Score=63.85 Aligned_cols=64 Identities=23% Similarity=0.403 Sum_probs=49.8
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC--------CCCceEEeCCCCCCCC-----CCCEEEec
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS--------YRGVKHIGGNMFERIP-----KGDAILMK 271 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~rv~~~~~d~~~~~p-----~~D~v~~~ 271 (369)
...+|||+|||+|..+..+++.. .+++++|. +.+++.++. .++++++.+|+.+.++ ..|+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 35899999999999999988774 58899998 777776543 2579999999987321 24999884
No 303
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.73 E-value=0.0015 Score=57.72 Aligned_cols=64 Identities=20% Similarity=0.178 Sum_probs=52.3
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC--CCCceEEeCCCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS--YRGVKHIGGNMFE 260 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~ 260 (369)
.+++++.+. +.....+||++||.|..+..++++ +.+++++|. |.+++.+++ .+|+.++.+||.+
T Consensus 11 l~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~ 77 (285)
T 1wg8_A 11 YQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRH 77 (285)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGG
T ss_pred HHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcch
Confidence 556777676 667789999999999999999998 679999999 877765432 2689999999976
No 304
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=96.58 E-value=0.0016 Score=45.89 Aligned_cols=62 Identities=16% Similarity=0.309 Sum_probs=49.2
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecCh
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAP 116 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~ 116 (369)
-.+..|++.|...+++.+.|+.+||+++|+ +..-+.+.|+-|...|++.... ..+++|..++
T Consensus 14 ~~~~~IL~~L~~~~~~~~~t~~eLA~~Lgv----s~~tV~~~L~~L~~~G~I~~~g----~~~~~W~i~~ 75 (77)
T 1qgp_A 14 DQEQRILKFLEELGEGKATTAHDLSGKLGT----PKKEINRVLYSLAKKGKLQKEA----GTPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHHHHCSSSCEEHHHHHHHHCC----CHHHHHHHHHHHHHHTSEEEEC----SSSCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEecC----CCCCceEecC
Confidence 346678888888643347999999999999 8999999999999999998642 1346777654
No 305
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=96.56 E-value=0.0023 Score=47.65 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=47.0
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
--.++.|+..|.. |+.|+.+||+.+|+ .+..+.+.|+.|...|+|.....+ ....|++++.
T Consensus 22 ~~~r~~Il~~L~~----~~~~~~ela~~l~i----s~~tvs~~L~~L~~~Glv~~~~~g---~~~~y~l~~~ 82 (102)
T 3pqk_A 22 HPVRLMLVCTLVE----GEFSVGELEQQIGI----GQPTLSQQLGVLRESGIVETRRNI---KQIFYRLTEA 82 (102)
T ss_dssp SHHHHHHHHHHHT----CCBCHHHHHHHHTC----CTTHHHHHHHHHHHTTSEEEECSS---SCCEEEECSS
T ss_pred CHHHHHHHHHHHh----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEEEeC---CEEEEEECcH
Confidence 3455667777865 48999999999999 999999999999999999864211 2346777753
No 306
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=96.56 E-value=0.0016 Score=46.00 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=50.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcc-cHHHHHHHHhcCccccccccCCCCCCcceecChhchh
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGV-MLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKY 120 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~-~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~ 120 (369)
.+-.|++.|... ||.|+.+||+.+|+ .+. .+++.|..|...|+|.... .+.-.|.+|+.+..
T Consensus 12 ~~~~IL~~Lk~~---g~~ta~eiA~~Lgi----t~~~aVr~hL~~Le~eGlV~~~~----~gRP~w~LT~~g~~ 74 (79)
T 1xmk_A 12 IKEKICDYLFNV---SDSSALNLAKNIGL----TKARDINAVLIDMERQGDVYRQG----TTPPIWHLTDKKRE 74 (79)
T ss_dssp HHHHHHHHHHHT---CCEEHHHHHHHHCG----GGHHHHHHHHHHHHHTTSEEEEC----SSSCEEEECHHHHT
T ss_pred HHHHHHHHHHHc---CCcCHHHHHHHcCC----CcHHHHHHHHHHHHHCCCEEecC----CCCCCeEeCHhHHh
Confidence 455688888886 59999999999999 888 9999999999999998541 12238999988764
No 307
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=96.25 E-value=0.0019 Score=47.70 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=48.2
Q ss_pred HHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 44 MQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 44 l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
+..-.++.|+..|.. ++.|+.+||+.+|+ .+..+.+.|+.|...|+|...... ....|++++.
T Consensus 20 l~~~~r~~Il~~L~~----~~~~~~ela~~l~i----s~~tvs~~L~~L~~~Glv~~~~~g---~~~~y~l~~~ 82 (98)
T 3jth_A 20 MANERRLQILCMLHN----QELSVGELCAKLQL----SQSALSQHLAWLRRDGLVTTRKEA---QTVYYTLKSE 82 (98)
T ss_dssp HCSHHHHHHHHHTTT----SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEECCT---TCCEEEECCH
T ss_pred cCCHHHHHHHHHHhc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEEEeC---CEEEEEECHH
Confidence 333456678888876 48999999999999 999999999999999999864210 2345776653
No 308
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=96.23 E-value=0.0023 Score=49.17 Aligned_cols=67 Identities=7% Similarity=0.109 Sum_probs=51.8
Q ss_pred HHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 42 ASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 42 ~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
.+|.--.++.|+..|.. ++.++.+||+.+|+ .+..+.+.|+.|...|+|...... ....|++++...
T Consensus 13 ~al~~~~R~~Il~~L~~----~~~~~~eLa~~l~i----s~~tvs~hL~~L~~~GlV~~~~~g---r~~~y~l~~~~~ 79 (118)
T 3f6o_A 13 QALADPTRRAVLGRLSR----GPATVSELAKPFDM----ALPSFMKHIHFLEDSGWIRTHKQG---RVRTCAIEKEPF 79 (118)
T ss_dssp HHHTSHHHHHHHHHHHT----CCEEHHHHHTTCCS----CHHHHHHHHHHHHHTTSEEEEEET---TEEEEEECSHHH
T ss_pred HHhCCHHHHHHHHHHHh----CCCCHHHHHHHhCc----CHHHHHHHHHHHHHCCCeEEEecC---CEEEEEECHHHH
Confidence 44445567888888885 48999999999999 999999999999999999764210 224677776443
No 309
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=96.20 E-value=0.0045 Score=46.58 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=47.3
Q ss_pred hhHHHHhcCCCCCCCHHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 52 VFEIIAKAGPGAKLSAAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 52 lfd~L~~~~~~~~~t~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
|+..|.. ++.++.+|++.+ ++ ++..+.+.|+.|...|+|.....+.......|.+|+.+..+.
T Consensus 19 IL~~L~~----~~~~~~eLa~~l~~i----s~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~ 82 (107)
T 2hzt_A 19 ILXHLTH----GKKRTSELKRLMPNI----TQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLE 82 (107)
T ss_dssp HHHHHTT----CCBCHHHHHHHCTTS----CHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HHHHHHh----CCCCHHHHHHHhcCC----CHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHH
Confidence 4444543 489999999999 99 999999999999999999875322111224689998876554
No 310
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=96.14 E-value=0.0033 Score=46.36 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=54.2
Q ss_pred HHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhh
Q 017595 42 ASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYF 121 (369)
Q Consensus 42 ~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~ 121 (369)
.++..-.++.|+..|... ++.|..+||+.+++ ++..+.+.|+.|...|++.............|.+|+.+...
T Consensus 11 ~~l~~~~~~~iL~~L~~~---~~~~~~ela~~l~i----s~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~~~ 83 (100)
T 1ub9_A 11 HILGNPVRLGIMIFLLPR---RKAPFSQIQKVLDL----TPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEE 83 (100)
T ss_dssp HHHHSHHHHHHHHHHHHH---SEEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHH
T ss_pred cccCChHHHHHHHHHHhc---CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHHHH
Confidence 455556678888888654 48999999999999 99999999999999999985321100122468888776543
No 311
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=96.11 E-value=0.004 Score=48.12 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=48.8
Q ss_pred HHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 43 SMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 43 ~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
+|..-.++.|+..|... ++.|+.+||+.+|+ .+..+.+.|+.|...|++..... + ....|++++.
T Consensus 38 al~~~~rl~IL~~L~~~---~~~s~~eLa~~l~i----s~stvs~~L~~L~~~Glv~~~~~--g-r~~~y~l~~~ 102 (122)
T 1u2w_A 38 AIADENRAKITYALCQD---EELCVCDIANILGV----TIANASHHLRTLYKQGVVNFRKE--G-KLALYSLGDE 102 (122)
T ss_dssp HHHSHHHHHHHHHHHHS---SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEC-------CCEEEESCH
T ss_pred HhCCHHHHHHHHHHHHC---CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEEEE--C-CEEEEEECHH
Confidence 34444577788888754 48999999999999 99999999999999999986421 0 1235777643
No 312
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=96.09 E-value=0.0033 Score=55.96 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=46.8
Q ss_pred ChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 51 GVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 51 glfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
.|++.|...+ ++.|+.|||+++|+ +..-+.|+|+.|+..|+|.++ ..+.|++++..-
T Consensus 34 ~IL~~l~~~~--~~ltl~eia~~lgl----~ksTv~RlL~tL~~~G~v~~~------~~~~Y~LG~~~~ 90 (275)
T 3mq0_A 34 RILDLVAGSP--RDLTAAELTRFLDL----PKSSAHGLLAVMTELDLLARS------ADGTLRIGPHSL 90 (275)
T ss_dssp HHHHHHHHCS--SCEEHHHHHHHHTC----C--CHHHHHHHHHHTTSEEEC------TTSEEEECTHHH
T ss_pred HHHHHHhhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEC------CCCcEEehHHHH
Confidence 6888888753 47999999999999 899999999999999999985 346899987544
No 313
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.93 E-value=0.013 Score=53.16 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=55.3
Q ss_pred hHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhC-CCCeEEEcch-hHHHHhCCC--CCCceEEeCCCCC
Q 017595 193 VMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-PHIEGVNFDL-PHVIQNAPS--YRGVKHIGGNMFE 260 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~ 260 (369)
..+++++.+. ......+||..+|.|..+..++++. |+.+++++|. |.+++.++. .+|++++.++|.+
T Consensus 45 Ll~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 45 LLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred cHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 4567777776 6677899999999999999999984 8899999999 888887643 2688889888865
No 314
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=95.88 E-value=0.015 Score=45.69 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=48.4
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 37 ~~~~~vL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 106 (142)
T 3ech_A 37 PPDVHVLKLIDEQ---RGLNLQDLGRQMCR----DKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHL 106 (142)
T ss_dssp HHHHHHHHHHHHT---TTCCHHHHHHHHC-------CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHHH
T ss_pred HHHHHHHHHHHhC---CCcCHHHHHHHhCC----CHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHHH
Confidence 5677788888875 48999999999999 9999999999999999998753211111234677877776553
No 315
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=95.87 E-value=0.0087 Score=46.76 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCC
Q 017595 27 TYSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSA 105 (369)
Q Consensus 27 ~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~ 105 (369)
.....++++.+-|...+|. .|.. |+.++.||++.+ |+ .+..|.+.|+.|...|+|.....+.
T Consensus 15 pi~~~l~~lg~kW~l~IL~---------~L~~----g~~rf~eL~~~l~gI----s~~~Ls~~L~~Le~~GLV~R~~~~~ 77 (131)
T 4a5n_A 15 PVEFTLDVIGGKWKGILFY---------HMID----GKKRFNEFRRICPSI----TQRMLTLQLRELEADGIVHREVYHQ 77 (131)
T ss_dssp HHHHHHHHHCSSSHHHHHH---------HHTT----SCBCHHHHHHHCTTS----CHHHHHHHHHHHHHTTSEEEEEECS
T ss_pred cHHHHHHHHcCcCHHHHHH---------HHhc----CCcCHHHHHHHhccc----CHHHHHHHHHHHHHCCCEEEEecCC
Confidence 4566677777777666554 3333 489999999999 99 9999999999999999998753221
Q ss_pred CCCCcceecChhchhhhc
Q 017595 106 GDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 106 ~~~~~~y~~t~~~~~~~~ 123 (369)
......|++|+.+..+..
T Consensus 78 d~r~v~y~LT~~G~~l~~ 95 (131)
T 4a5n_A 78 VPPKVEYSLTEFGRTLEP 95 (131)
T ss_dssp SSCEEEEEECTTGGGGHH
T ss_pred CCCeEEEEECHhHHHHHH
Confidence 111246999999887664
No 316
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=95.85 E-value=0.004 Score=45.80 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=47.8
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVA 118 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~ 118 (369)
-.++.|+..|... ++.|+.+||+.+|+ ++..+.+.|+.|...|++..... + ....|.+++.+
T Consensus 24 ~~~~~il~~l~~~---~~~s~~ela~~l~i----s~~tvs~~l~~L~~~glv~~~~~--~-r~~~y~l~~~~ 85 (99)
T 3cuo_A 24 PKRLLILCMLSGS---PGTSAGELTRITGL----SASATSQHLARMRDEGLIDSQRD--A-QRILYSIKNEA 85 (99)
T ss_dssp HHHHHHHHHHTTC---CSEEHHHHHHHHCC----CHHHHHHHHHHHHHTTSEEEEEC--S-SCEEEEECCHH
T ss_pred hHHHHHHHHHHhC---CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEEec--C-CEEEEEEChHH
Confidence 4566788888663 48999999999999 99999999999999999987521 0 22356776543
No 317
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=95.77 E-value=0.0054 Score=46.46 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=46.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
.++.|+..|.. ++.|+.+||+.+|+ ++..+.++|+.|...|++..... + ....|.+|+.+.
T Consensus 22 ~r~~IL~~L~~----~~~~~~ela~~l~i----s~~tv~~~l~~L~~~gli~~~~~--g-r~~~y~l~~~~~ 82 (114)
T 2oqg_A 22 TRWEILTELGR----ADQSASSLATRLPV----SRQAIAKHLNALQACGLVESVKV--G-REIRYRALGAEL 82 (114)
T ss_dssp HHHHHHHHHHH----SCBCHHHHHHHSSS----CHHHHHHHHHHHHHTTSEEEEEE--T-TEEEEEECSHHH
T ss_pred HHHHHHHHHHc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeeEEec--C-CEEEEEechHHH
Confidence 45667777844 48999999999999 99999999999999999986421 0 123477776554
No 318
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=95.76 E-value=0.0048 Score=47.32 Aligned_cols=64 Identities=16% Similarity=0.154 Sum_probs=48.3
Q ss_pred HHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 43 SMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 43 ~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
+|..-.++.|+..|.. ++.++.+||+.+|+ ++..+.+.|+.|...|++...... ....|++++.
T Consensus 17 aL~~~~r~~IL~~L~~----~~~~~~eLa~~lgi----s~stvs~~L~~L~~~GlV~~~~~g---r~~~y~l~~~ 80 (118)
T 2jsc_A 17 ALADPTRCRILVALLD----GVCYPGQLAAHLGL----TRSNVSNHLSCLRGCGLVVATYEG---RQVRYALADS 80 (118)
T ss_dssp HHSSHHHHHHHHHHHT----TCCSTTTHHHHHSS----CHHHHHHHHHHHTTTTSEEEEECS---SSEEEEESSH
T ss_pred HhCCHHHHHHHHHHHc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCceEEEEEC---CEEEEEEChH
Confidence 3334456677888875 48999999999999 999999999999999999864210 2235777753
No 319
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=95.75 E-value=0.0047 Score=49.65 Aligned_cols=69 Identities=16% Similarity=0.297 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 40 LPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 40 ~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
...+|.--.++.|+..|.. ++.|+.+||+.+|+ .+..+.+.|+.|...|+|..... + ....|++++.+.
T Consensus 51 ~l~aL~~p~R~~IL~~L~~----~~~t~~eLa~~lgl----s~stvs~hL~~L~~aGlV~~~~~--G-r~~~y~lt~~~~ 119 (151)
T 3f6v_A 51 QLEVAAEPTRRRLVQLLTS----GEQTVNNLAAHFPA----SRSAISQHLRVLTEAGLVTPRKD--G-RFRYYRLDPQGL 119 (151)
T ss_dssp HHHHHTSHHHHHHHHHGGG----CCEEHHHHHTTSSS----CHHHHHHHHHHHHHTTSEEEEEE--T-TEEEEEECHHHH
T ss_pred HHHHhCCHHHHHHHHHHHh----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEEec--C-CEEEEEEChHHH
Confidence 4556666778899999985 48999999999999 99999999999999999986421 1 224688887554
No 320
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=95.75 E-value=0.0069 Score=45.92 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=54.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCCC
Q 017595 28 YSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAG 106 (369)
Q Consensus 28 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~ 106 (369)
...+.++..+.|... |+..|.. ++.+..+||+.+ ++ ++..+.+.|+.|...|+|.....+..
T Consensus 12 ~~~~l~~l~~~~~~~---------IL~~L~~----~~~~~~eLa~~l~~i----s~~tvs~~L~~Le~~GlI~r~~~~~d 74 (112)
T 1z7u_A 12 INLALSTINGKWKLS---------LMDELFQ----GTKRNGELMRALDGI----TQRVLTDRLREMEKDGLVHRESFNEL 74 (112)
T ss_dssp HHHHHHTTCSTTHHH---------HHHHHHH----SCBCHHHHHHHSTTC----CHHHHHHHHHHHHHHTSEEEEEECCS
T ss_pred HHHHHHHHcCccHHH---------HHHHHHh----CCCCHHHHHHHhccC----CHHHHHHHHHHHHHCCCEEEeecCCC
Confidence 344455555555443 4445554 389999999999 99 99999999999999999987532211
Q ss_pred CCCcceecChhchhhh
Q 017595 107 DNQRLYSLAPVAKYFV 122 (369)
Q Consensus 107 ~~~~~y~~t~~~~~~~ 122 (369)
.....|.+|+.+..+.
T Consensus 75 ~r~~~~~LT~~G~~~~ 90 (112)
T 1z7u_A 75 PPRVEYTLTPEGYALY 90 (112)
T ss_dssp SCEEEEEECHHHHHHH
T ss_pred CCeEEEEECHhHHHHH
Confidence 1123589998887654
No 321
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=95.69 E-value=0.0054 Score=46.00 Aligned_cols=47 Identities=15% Similarity=0.306 Sum_probs=40.6
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
-.++.|+..|.. ++.++.+||+.+|+ .+..+.+.|+.|...|++...
T Consensus 26 ~~r~~IL~~L~~----~~~~~~ela~~l~i----s~stvs~~L~~L~~~Glv~~~ 72 (106)
T 1r1u_A 26 YNRIRIMELLSV----SEASVGHISHQLNL----SQSNVSHQLKLLKSVHLVKAK 72 (106)
T ss_dssp HHHHHHHHHHHH----CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHh----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEE
Confidence 445667777775 48999999999999 999999999999999999864
No 322
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=95.61 E-value=0.0076 Score=45.66 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCC--HHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCC
Q 017595 29 SFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLS--AAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSA 105 (369)
Q Consensus 29 ~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t--~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~ 105 (369)
..+.+.+.+.|...+ +..|.. |+.+ +.||++.+ |+ .+..+.+.|+.|...|+|.....
T Consensus 18 ~~~l~~l~~~wrl~I---------L~~L~~----g~~~~~~~eL~~~l~gi----s~~~ls~~L~~Le~~GlV~r~~~-- 78 (111)
T 3df8_A 18 ESVLHLLGKKYTMLI---------ISVLGN----GSTRQNFNDIRSSIPGI----SSTILSRRIKDLIDSGLVERRSG-- 78 (111)
T ss_dssp SSTHHHHHSTTHHHH---------HHHHTS----SSSCBCHHHHHHTSTTC----CHHHHHHHHHHHHHTTSEEEEES--
T ss_pred HHHHHHHcCccHHHH---------HHHHhc----CCCCCCHHHHHHHccCC----CHHHHHHHHHHHHHCCCEEEeec--
Confidence 445566666665554 445553 4777 99999999 99 99999999999999999987421
Q ss_pred CCCCcceecChhchhhhc
Q 017595 106 GDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 106 ~~~~~~y~~t~~~~~~~~ 123 (369)
....|++|+.+..+..
T Consensus 79 --r~~~y~LT~~G~~l~~ 94 (111)
T 3df8_A 79 --QITTYALTEKGMNVRN 94 (111)
T ss_dssp --SSEEEEECHHHHHHHH
T ss_pred --CcEEEEECccHHHHHH
Confidence 2457999988876553
No 323
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.54 E-value=0.015 Score=53.47 Aligned_cols=54 Identities=9% Similarity=0.141 Sum_probs=38.7
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC---CCCCceEEeCCCCC
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP---SYRGVKHIGGNMFE 260 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~---~~~rv~~~~~d~~~ 260 (369)
...|||||+|.|.++..|+++...-+++.++. +..++..+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 47999999999999999998743234555554 33333221 35799999999976
No 324
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=95.53 E-value=0.011 Score=41.80 Aligned_cols=45 Identities=20% Similarity=0.192 Sum_probs=39.2
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..|++.|... ++.|+.|||+.+|+ .+.-+.+.|+.|...|++...
T Consensus 3 ~~Il~~L~~~---~~~s~~eLa~~lgv----s~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 3 NEILEFLNRH---NGGKTAEIAEALAV----TDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHHS---CCCCHHHHHHHHTS----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEe
Confidence 3577778764 48999999999999 999999999999999999853
No 325
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=95.47 E-value=0.0086 Score=41.99 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=37.6
Q ss_pred hhHHHHhc-----CCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 52 VFEIIAKA-----GPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 52 lfd~L~~~-----~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
|++.|... | +|.|+.|||+.+|+ .+.-+++.|..|...|++...
T Consensus 9 IL~~I~~~i~~~~g--~~psv~EIa~~lgv----S~~TVrr~L~~Le~kG~I~R~ 57 (77)
T 2jt1_A 9 IISIVQERQNMDDG--APVKTRDIADAAGL----SIYQVRLYLEQLHDVGVLEKV 57 (77)
T ss_dssp HHHHHHHHHHHHTT--SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHhhccC--CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCcEEec
Confidence 55555543 3 58999999999999 888999999999999999875
No 326
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=95.46 E-value=0.012 Score=51.53 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=48.2
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
+.|++.|...+ ++.|+.|||+.+|+ +..-+.|+|+.|+..|++..+ ..+.|++++...
T Consensus 11 l~iL~~l~~~~--~~~~~~ela~~~gl----~~stv~r~l~~L~~~G~v~~~------~~~~Y~lg~~~~ 68 (249)
T 1mkm_A 11 FEILDFIVKNP--GDVSVSEIAEKFNM----SVSNAYKYMVVLEEKGFVLRK------KDKRYVPGYKLI 68 (249)
T ss_dssp HHHHHHHHHCS--SCBCHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEC------TTSCEEECTHHH
T ss_pred HHHHHHHHhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCcEEEC------CCCcEEECHHHH
Confidence 46778887642 37999999999999 999999999999999999874 357899987543
No 327
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.43 E-value=0.02 Score=52.78 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=70.0
Q ss_pred cCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC------------CCCCceEEeCCCCC--C-CCCC-C
Q 017595 204 FEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP------------SYRGVKHIGGNMFE--R-IPKG-D 266 (369)
Q Consensus 204 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~rv~~~~~d~~~--~-~p~~-D 266 (369)
.....+|||+.+|.|.=+.++++..++-.++..|. +.-++..+ ...++.+...|... + .+.. |
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 45678999999999999999999887767888887 44333221 12568888888765 2 2333 8
Q ss_pred EEEec----c----c-------cccCChhH-------HHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 267 AILMK----W----I-------LHNWDDEH-------CLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 267 ~v~~~----~----v-------lh~~~d~~-------~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
.|++- . + ...+..++ -.++|+++.+.|||||+|+-..-.+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 88642 1 1 12222222 24789999999999998876555443
No 328
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=95.41 E-value=0.003 Score=47.62 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=39.4
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|+..|.. ++.|+.+||+.+|+ .+..+.+.|+.|...|+|...
T Consensus 26 ~r~~IL~~L~~----~~~s~~eLa~~lgi----s~stvs~~L~~L~~~GlV~~~ 71 (108)
T 2kko_A 26 RRLQILDLLAQ----GERAVEAIATATGM----NLTTASANLQALKSGGLVEAR 71 (108)
T ss_dssp TTHHHHHHHTT----CCEEHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHc----CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEE
Confidence 34556667765 48999999999999 999999999999999999864
No 329
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=95.40 E-value=0.0088 Score=44.90 Aligned_cols=78 Identities=14% Similarity=0.117 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCCC
Q 017595 28 YSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAG 106 (369)
Q Consensus 28 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~ 106 (369)
...+.+.+.+.|...+| ..|.. ++.++.+|++.+ |+ ++..+.+.|+.|...|+|.....+..
T Consensus 15 ~~~~l~~l~~~~~~~IL---------~~L~~----~~~~~~eL~~~l~gi----s~~~ls~~L~~Le~~GlV~r~~~~~d 77 (107)
T 2fsw_A 15 VRKSMQIFAGKWTLLII---------FQINR----RIIRYGELKRAIPGI----SEKMLIDELKFLCGKGLIKKKQYPEV 77 (107)
T ss_dssp HHHHHHHHTSSSHHHHH---------HHHTT----SCEEHHHHHHHSTTC----CHHHHHHHHHHHHHTTSEEEEEECSS
T ss_pred HHHHHHHHcCccHHHHH---------HHHHh----CCcCHHHHHHHcccC----CHHHHHHHHHHHHHCCCEEEeecCCC
Confidence 45555666666655443 34443 489999999999 49 99999999999999999987532211
Q ss_pred CCCcceecChhchhhh
Q 017595 107 DNQRLYSLAPVAKYFV 122 (369)
Q Consensus 107 ~~~~~y~~t~~~~~~~ 122 (369)
.....|.+|+.+..+.
T Consensus 78 ~r~~~y~LT~~G~~l~ 93 (107)
T 2fsw_A 78 PPRVEYSLTPLGEKVL 93 (107)
T ss_dssp SCEEEEEECHHHHTTH
T ss_pred CCeeEEEECccHHHHH
Confidence 1124699999887654
No 330
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=95.39 E-value=0.023 Score=44.13 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=42.2
Q ss_pred hhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 52 VFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 52 lfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
++..|....++++.|+.+||+.+++ ++..+.++|+.|...|+|.... ...+.|.++..
T Consensus 14 iL~~la~~~~~~~~s~~ela~~~~i----~~~~v~~il~~L~~~Glv~~~~----g~~ggy~L~~~ 71 (129)
T 2y75_A 14 IMIELAKKHGEGPTSLKSIAQTNNL----SEHYLEQLVSPLRNAGLVKSIR----GAYGGYVLGSE 71 (129)
T ss_dssp HHHHHHHTTTSCCBCHHHHHHHTTS----CHHHHHHHHHHHHHTTSEEEC--------CCEEESSC
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHCc----CHHHHHHHHHHHHHCCceEecC----CCCCceEeCCC
Confidence 4444544211258999999999999 9999999999999999998641 02366877654
No 331
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=95.36 E-value=0.0087 Score=52.11 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=49.3
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhh
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYF 121 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~ 121 (369)
+.|++.|...+ ++.|+.|||+.+|+ +..-+.|+|+.|+..|++.++. +.++|++++....+
T Consensus 9 l~iL~~l~~~~--~~~s~~ela~~~gl----~~stv~r~l~~L~~~G~v~~~~-----~~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 9 ASIMRALGSHP--HGLSLAAIAQLVGL----PRSTVQRIINALEEEFLVEALG-----PAGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHTCT--TCEEHHHHHHHTTS----CHHHHHHHHHHHHTTTSEEECG-----GGCEEEECSHHHHH
T ss_pred HHHHHHHHhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEeC-----CCCeEEECHHHHHH
Confidence 45778887642 37999999999999 9999999999999999999752 24789998765444
No 332
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=95.36 E-value=0.058 Score=42.74 Aligned_cols=67 Identities=13% Similarity=0.268 Sum_probs=48.3
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc--cCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL--SSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~--~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..| .. ++.|..+||+.+++ ++..+.++++.|...|+|.... .+.......+.+|+.+..++.
T Consensus 40 q~~iL~~l-~~---~~~t~~eLa~~l~~----~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~~ 108 (151)
T 3kp7_A 40 QSHVLNML-SI---EALTVGQITEKQGV----NKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYIK 108 (151)
T ss_dssp HHHHHHHH-HH---SCBCHHHHHHHHCS----CSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHHH
T ss_pred HHHHHHHH-Hc---CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHHH
Confidence 44588888 54 48999999999999 9999999999999999998621 110111235677777776553
No 333
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=95.35 E-value=0.013 Score=46.75 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=44.5
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
|+.+..+|++.+++ .+..+.+.|+.|...|+|+....+... ...|.+|+.+..+.
T Consensus 36 g~~~~~eLa~~lgi----s~~tls~~L~~Le~~GlI~r~~~~~d~-~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 36 GLTRFGEFQKSLGL----AKNILAARLRNLVEHGVMVAVPAESGS-HQEYRLTDKGRALF 90 (146)
T ss_dssp TCCSHHHHHHHHCC----CHHHHHHHHHHHHHTTSEEEEECSSSS-CEEEEECHHHHTTH
T ss_pred CCCCHHHHHHHhCC----CHHHHHHHHHHHHHCCCEEEEecCCCC-eEEEEECchHHHHH
Confidence 48999999999999 999999999999999999875322112 34789998876554
No 334
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=95.28 E-value=0.019 Score=44.76 Aligned_cols=69 Identities=13% Similarity=0.221 Sum_probs=52.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.|+.|...|++.....+.+.....+.+|+.+..+..
T Consensus 34 ~~~~iL~~l~~~---~~~~~~ela~~l~~----~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (139)
T 3bja_A 34 VQFGVIQVLAKS---GKVSMSKLIENMGC----VPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETKK 102 (139)
T ss_dssp HHHHHHHHHHHS---CSEEHHHHHHHCSS----CCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCcCHHHHHHHHCC----ChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHHH
Confidence 466678888775 48999999999999 9999999999999999998743221111234778887776553
No 335
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=95.27 E-value=0.0092 Score=46.04 Aligned_cols=47 Identities=17% Similarity=0.315 Sum_probs=41.0
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
-.++.|+..|.. ++.++.+||+.+|+ .+..+.+.|+.|...|++...
T Consensus 46 ~~rl~IL~~L~~----~~~s~~ela~~lgi----s~stvs~~L~~Le~~Glv~~~ 92 (122)
T 1r1t_A 46 PNRLRLLSLLAR----SELCVGDLAQAIGV----SESAVSHQLRSLRNLRLVSYR 92 (122)
T ss_dssp HHHHHHHHHHTT----CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEE
Confidence 346678888865 48999999999999 999999999999999999864
No 336
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=95.26 E-value=0.012 Score=46.01 Aligned_cols=79 Identities=14% Similarity=0.074 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC-CCCCCCCcccHHHHHHHHhcCccccccccCCC
Q 017595 28 YSFAMQLAMSIVLPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM-PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAG 106 (369)
Q Consensus 28 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~-~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~ 106 (369)
...+.+++.+.|... |+..|.. |+.++.+|++.+ |+ .+..+.+.|+.|...|+|.....+..
T Consensus 25 ~~~~l~~l~~~w~l~---------IL~~L~~----g~~~~~eLa~~l~gi----s~~tls~~L~~Le~~GlV~r~~~~~d 87 (131)
T 1yyv_A 25 SREVLKHVTSRWGVL---------ILVALRD----GTHRFSDLRRXMGGV----SEXMLAQSLQALEQDGFLNRVSYPVV 87 (131)
T ss_dssp HHHHHHHHHSHHHHH---------HHHHGGG----CCEEHHHHHHHSTTC----CHHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred HHHHHHHHcCCcHHH---------HHHHHHc----CCCCHHHHHHHhccC----CHHHHHHHHHHHHHCCcEEEEecCCC
Confidence 444555555555543 3444543 489999999999 79 99999999999999999987432211
Q ss_pred CCCcceecChhchhhhc
Q 017595 107 DNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 107 ~~~~~y~~t~~~~~~~~ 123 (369)
.....|.+|+.+..+..
T Consensus 88 ~r~~~y~LT~~G~~l~~ 104 (131)
T 1yyv_A 88 PPHVEYSLTPLGEQVSD 104 (131)
T ss_dssp SCEEEEEECHHHHHHHH
T ss_pred CCeEEEEECccHHHHHH
Confidence 11236999998876553
No 337
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=95.25 E-value=0.015 Score=40.88 Aligned_cols=43 Identities=21% Similarity=0.266 Sum_probs=39.1
Q ss_pred hhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 52 VFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 52 lfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
|.+.|.+. |.+++.|||+.+++ .+.-++|-|+.|...|++.+.
T Consensus 7 Il~~L~~~---g~vsv~eLa~~l~V----S~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 7 VRDLLALR---GRMEAAQISQTLNT----PQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHS---CSBCHHHHHHHTTC----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHc---CCCcHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEe
Confidence 67788775 59999999999999 999999999999999999874
No 338
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=95.24 E-value=0.014 Score=41.82 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=39.6
Q ss_pred ChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 51 GVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 51 glfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.|.+.|... |.+++.+||+.+++ .+.-++|.|+.|...|++.+.
T Consensus 6 ~Il~~L~~~---g~vsv~eLA~~l~V----S~~TIRrDL~~Le~~G~l~R~ 49 (87)
T 2k02_A 6 EVRDMLALQ---GRMEAKQLSARLQT----PQPLIDAMLERMEAMGKVVRI 49 (87)
T ss_dssp HHHHHHHHS---CSEEHHHHHHHTTC----CHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHc---CCCcHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 367788775 59999999999999 999999999999999999875
No 339
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=95.19 E-value=0.064 Score=41.79 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=53.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.|+.|+..|++.....+.+.....|.+|+.+..+.
T Consensus 32 ~~~~iL~~l~~~---~~~~~~ela~~l~i----s~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 32 TRYSILQTLLKD---APLHQLALQERLQI----DRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHHH---CSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 456688888775 48999999999999 999999999999999999875322111234688898888776
No 340
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=95.17 E-value=0.013 Score=41.36 Aligned_cols=60 Identities=17% Similarity=0.097 Sum_probs=46.4
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVA 118 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~ 118 (369)
.....|++.|... +.|+.+||+.+|+ ....+.+.|..|...|+|.... ..+-.|+++...
T Consensus 17 ~~~~~IL~lL~~~----g~sa~eLAk~Lgi----Sk~aVr~~L~~Le~eG~I~~~~----~~PP~W~~~~~~ 76 (82)
T 1oyi_A 17 EIVCEAIKTIGIE----GATAAQLTRQLNM----EKREVNKALYDLQRSAMVYSSD----DIPPRWFMTTEA 76 (82)
T ss_dssp HHHHHHHHHHSSS----TEEHHHHHHHSSS----CHHHHHHHHHHHHHHTSSEECS----SSSCEEESCC--
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEeCC----CCCCcceeccCc
Confidence 3455678888863 4999999999999 9999999999999999998741 134567766543
No 341
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.12 E-value=0.064 Score=52.27 Aligned_cols=107 Identities=10% Similarity=0.053 Sum_probs=67.6
Q ss_pred HHHhccCcCCcceEEEEcCChhHHHHHHHHhC-------------CCCeEEEcch-hHHHHhCCC------CCCceEEeC
Q 017595 197 ILDSYNGFEQIKQLVDVGGGLGVTLNIITSRY-------------PHIEGVNFDL-PHVIQNAPS------YRGVKHIGG 256 (369)
Q Consensus 197 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~ 256 (369)
+.+.+. .....+|+|-+||+|.++....+.. ....+.|+|. +.+...++- .+.-.+..+
T Consensus 209 mv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~ 287 (530)
T 3ufb_A 209 MVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPE 287 (530)
T ss_dssp HHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECS
T ss_pred HHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccccc
Confidence 333343 3455699999999999998876542 1346788887 655554431 234467788
Q ss_pred CCCC-CCC------CCCEEEecccccc---------C-----ChhHHHHHHHHHHHhCC-------CCCEEEEEec
Q 017595 257 NMFE-RIP------KGDAILMKWILHN---------W-----DDEHCLTLLKNCYEAIP-------ENGKIIIIDR 304 (369)
Q Consensus 257 d~~~-~~p------~~D~v~~~~vlh~---------~-----~d~~~~~~L~~~~~~L~-------pgG~lli~e~ 304 (369)
|.+. +.. ..|+|+.+--+-. + ..+....+++.+.+.|+ |||++.++-+
T Consensus 288 dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 288 NSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 8775 321 1399998765521 1 01122356788888887 6999888754
No 342
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=95.12 E-value=0.024 Score=45.77 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=53.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 47 ~q~~iL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 115 (162)
T 3k0l_A 47 PQFTALSVLAAK---PNLSNAKLAERSFI----KPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLN 115 (162)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHTS----CGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHHH
Confidence 456688888875 48999999999999 9999999999999999998753221111235788888876654
No 343
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=95.10 E-value=0.037 Score=43.53 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=53.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..+..
T Consensus 32 ~q~~iL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 100 (145)
T 3g3z_A 32 NLFAVLYTLATE---GSRTQKHIGEKWSL----PKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAA 100 (145)
T ss_dssp HHHHHHHHHHHH---CSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHHH
Confidence 467788888765 47999999999999 9999999999999999998743211111235888888876653
No 344
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=95.08 E-value=0.024 Score=44.67 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=52.4
Q ss_pred HHHhChhHHHHh-cCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAK-AGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~-~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|.. . ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..++.
T Consensus 35 ~~~~~iL~~l~~~~---~~~~~~~la~~l~i----~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (147)
T 2hr3_A 35 FSQLVVLGAIDRLG---GDVTPSELAAAERM----RSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLY 105 (147)
T ss_dssp HHHHHHHHHHHHTT---SCBCHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CCCCHHHHHHHhCC----ChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHHH
Confidence 456778888876 4 48999999999999 9999999999999999998752211111234778887776554
No 345
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=95.03 E-value=0.041 Score=42.79 Aligned_cols=69 Identities=17% Similarity=0.102 Sum_probs=51.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|...|+|.....+.+.....+.+|+.+..+..
T Consensus 35 ~~~~iL~~l~~~---~~~~~~~la~~l~~----~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 103 (138)
T 1jgs_A 35 AQFKVLCSIRCA---ACITPVELKKVLSV----DLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICE 103 (138)
T ss_dssp HHHHHHHHHHHH---SSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhc---CCCCHHHHHHHHCC----ChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHHH
Confidence 355677777764 48999999999999 9999999999999999998743221111234778888776654
No 346
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=95.01 E-value=0.014 Score=42.90 Aligned_cols=65 Identities=12% Similarity=0.227 Sum_probs=50.4
Q ss_pred HhChhHHHHhcCCCCCCCHHHH----HHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQI----AAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~L----a~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..|... ++.|..+| |+.+++ ++..+.++|+.|...|++.....+ ....|.+|+.+..++.
T Consensus 10 q~~iL~~l~~~---~~~~~~el~~~la~~l~i----s~~tvs~~l~~Le~~gli~r~~~~---r~~~~~LT~~G~~~~~ 78 (99)
T 1tbx_A 10 EAIVLAYLYDN---EGIATYDLYKKVNAEFPM----STATFYDAKKFLIQEGFVKERQER---GEKRLYLTEKGKLFAI 78 (99)
T ss_dssp HHHHHHHHTTC---TTCBHHHHHHHHHTTSCC----CHHHHHHHHHHHHHTTSEEEEEET---TEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHc---CCcCHHHHHHHHHHHcCC----CHHHHHHHHHHHHHCCCEEEEecC---CceEEEECHHHHHHHH
Confidence 45567777664 48999999 999999 999999999999999999874211 2346788888876654
No 347
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=94.97 E-value=0.016 Score=45.88 Aligned_cols=70 Identities=11% Similarity=0.172 Sum_probs=51.2
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.......+.+|+.+..+..
T Consensus 40 ~~~~~iL~~l~~~---~~~t~~ela~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~~ 109 (148)
T 3nrv_A 40 MTEWRIISVLSSA---SDCSVQKISDILGL----DKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELYE 109 (148)
T ss_dssp HHHHHHHHHHHHS---SSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHHH
T ss_pred HHHHHHHHHHHcC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHHH
Confidence 3566788888775 48999999999999 9999999999999999998753221111345778877776553
No 348
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.95 E-value=0.055 Score=48.50 Aligned_cols=129 Identities=17% Similarity=0.174 Sum_probs=71.9
Q ss_pred CcceEEEEcCChhHHHHH----HHHhCCCCe--EEEcch-h------------HHHH----hCCC--CCC--ceEEeCCC
Q 017595 206 QIKQLVDVGGGLGVTLNI----ITSRYPHIE--GVNFDL-P------------HVIQ----NAPS--YRG--VKHIGGNM 258 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~----l~~~~p~~~--~~~~D~-~------------~~~~----~a~~--~~r--v~~~~~d~ 258 (369)
..-+|||+|=|+|..... +.+..|+.+ ++.++. | ...+ .... ..+ +++.-||+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 457899999999975433 334577765 454442 1 0000 0000 023 46677887
Q ss_pred CC---CCCC--CCEEEeccccccC-ChhHHHHHHHHHHHhCCCCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcC
Q 017595 259 FE---RIPK--GDAILMKWILHNW-DDEHCLTLLKNCYEAIPENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSG 332 (369)
Q Consensus 259 ~~---~~p~--~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 332 (369)
.+ .++. .|++++-..=-.- |+=-...++++++++++|||.+.-..
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt----------------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS----------------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC-----------------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe-----------------------------
Confidence 65 2333 2888764311000 11112478999999999999776311
Q ss_pred CccCCHHHHHHHHHHcCCcceeEEEecCceeEEEE
Q 017595 333 GRERTTQEFMALANEAGFNGVNYECFVCNFCIIEF 367 (369)
Q Consensus 333 ~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~ 367 (369)
....++.-|++|||++.++-..+..--++.+
T Consensus 227 ----aag~VRR~L~~aGF~V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 227 ----SSLSVRKSLLTLGFKVGSSREIGRKRKGTVA 257 (308)
T ss_dssp ----CCHHHHHHHHHTTCEEEEEECC---CEEEEE
T ss_pred ----CcHHHHHHHHHCCCEEEecCCCCCCCceeEE
Confidence 1234677889999998877655544334433
No 349
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=94.95 E-value=0.0053 Score=54.17 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=48.3
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchh
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKY 120 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~ 120 (369)
+.|++.|...+ +++|+.|||+++|+ +..-+.|+|+.|+..|++.++. +.+.|++++..-.
T Consensus 9 l~IL~~l~~~~--~~lsl~eia~~lgl----~ksT~~RlL~tL~~~G~v~~~~-----~~~~Y~lG~~~~~ 68 (260)
T 3r4k_A 9 LTLLTYFNHGR--LEIGLSDLTRLSGM----NKATVYRLMSELQEAGFVEQVE-----GARSYRLGPQVLR 68 (260)
T ss_dssp HHHHTTCBTTB--SEEEHHHHHHHHCS----CHHHHHHHHHHHHHTTSEEECS-----SSSEEEECTTHHH
T ss_pred HHHHHHHhhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEcC-----CCCcEEcCHHHHH
Confidence 35677776532 48999999999999 9999999999999999999852 3378999875443
No 350
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=94.91 E-value=0.052 Score=43.11 Aligned_cols=69 Identities=12% Similarity=0.106 Sum_probs=52.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc--cccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC--SLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~--~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.. ...+.+.....+.+|+.+..+..
T Consensus 42 ~~~~iL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~~ 112 (154)
T 2qww_A 42 QQLAMINVIYST---PGISVADLTKRLII----TGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSK 112 (154)
T ss_dssp HHHHHHHHHHHS---TTEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHHH
Confidence 456678888775 48999999999999 99999999999999999987 32211111235788888776554
No 351
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.85 E-value=0.041 Score=48.60 Aligned_cols=92 Identities=13% Similarity=0.143 Sum_probs=59.7
Q ss_pred CCcceEEEEcC------ChhHHHHHHHHhCCC-CeEEEcchhHHHHhCCCCCCceEEeCCCCC-CCCCC-CEEEeccccc
Q 017595 205 EQIKQLVDVGG------GLGVTLNIITSRYPH-IEGVNFDLPHVIQNAPSYRGVKHIGGNMFE-RIPKG-DAILMKWILH 275 (369)
Q Consensus 205 ~~~~~vLDvG~------G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~~p~~-D~v~~~~vlh 275 (369)
+-..+|||+|+ -.|.+ .+.+..|. ..++.+|+.++... .. .++.||+.+ ..+.. |+|++-..=-
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sd----a~-~~IqGD~~~~~~~~k~DLVISDMAPN 180 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSD----AD-STLIGDCATVHTANKWDLIISDMYDP 180 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCS----SS-EEEESCGGGEEESSCEEEEEECCCCT
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccC----CC-eEEEccccccccCCCCCEEEecCCCC
Confidence 46689999996 67774 33344776 69999998443321 12 558999766 23233 8887543211
Q ss_pred -------cC--ChhHHHHHHHHHHHhCCCCCEEEEEe
Q 017595 276 -------NW--DDEHCLTLLKNCYEAIPENGKIIIID 303 (369)
Q Consensus 276 -------~~--~d~~~~~~L~~~~~~L~pgG~lli~e 303 (369)
.- ...-++.+|.=+.+.|+|||.+++--
T Consensus 181 tTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 181 RTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp TSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 10 12247778888899999999999753
No 352
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=94.85 E-value=0.018 Score=42.23 Aligned_cols=48 Identities=13% Similarity=0.197 Sum_probs=43.8
Q ss_pred CCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 65 LSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 65 ~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.+..+||..+|+ +++.++..++.|...|++... .+.|.+|+.+..++.
T Consensus 21 ~~~t~La~~~~l----s~~~~~~~l~~L~~~GLI~~~-------~~~~~LT~kG~~~l~ 68 (95)
T 1r7j_A 21 SPKTRIMYGANL----SYALTGRYIKMLMDLEIIRQE-------GKQYMLTKKGEELLE 68 (95)
T ss_dssp BCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-------TTEEEECHHHHHHHH
T ss_pred CCHHHHHHHhCc----CHHHHHHHHHHHHHCCCeEEE-------CCeeEEChhHHHHHH
Confidence 899999999999 999999999999999999974 456999999997764
No 353
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=94.84 E-value=0.014 Score=45.92 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=52.6
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 37 ~~~~~iL~~l~~~---~~~t~~eLa~~l~~----~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 106 (143)
T 3oop_A 37 PEQWSVLEGIEAN---EPISQKEIALWTKK----DTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETT 106 (143)
T ss_dssp HHHHHHHHHHHHH---SSEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCcCHHHHHHHHCC----CHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHHH
Confidence 4466678888765 48999999999999 9999999999999999998743221112245788888776654
No 354
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=94.83 E-value=0.022 Score=44.87 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=44.1
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.|+.+||+.+++ ++..+.+.|+.|...|+|... ....|.+|+.+..+..
T Consensus 21 ~~~~~~ela~~l~v----s~~tvs~~l~~Le~~Glv~r~------~~~~~~LT~~g~~~~~ 71 (142)
T 1on2_A 21 GYARVSDIAEALAV----HPSSVTKMVQKLDKDEYLIYE------KYRGLVLTSKGKKIGK 71 (142)
T ss_dssp SSCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEE------TTTEEEECHHHHHHHH
T ss_pred CCCCHHHHHHHhCC----CHHHHHHHHHHHHHCCCEEEe------eCceEEEchhHHHHHH
Confidence 48999999999999 999999999999999999874 3467999988876553
No 355
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=94.82 E-value=0.03 Score=44.70 Aligned_cols=70 Identities=14% Similarity=0.089 Sum_probs=53.1
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 44 ~~~~~iL~~l~~~---~~~t~~ela~~l~i----s~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 113 (154)
T 2eth_A 44 TTELYAFLYVALF---GPKKMKEIAEFLST----TKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFG 113 (154)
T ss_dssp HHHHHHHHHHHHH---CCBCHHHHHHHTTS----CHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHHH
Confidence 4567788888775 48999999999999 9999999999999999998743211111234778877776553
No 356
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=94.78 E-value=0.051 Score=43.62 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=50.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.|+..|... ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....|.+|+.+..++.
T Consensus 50 ~~~~iL~~l~~~---~~~t~~ela~~l~i----s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 118 (162)
T 2fa5_A 50 PEWRVITILALY---PGSSASEVSDRTAM----DKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVYE 118 (162)
T ss_dssp HHHHHHHHHHHS---TTCCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHHH
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHHH
Confidence 456678888775 48999999999999 9999999999999999998742111111245777877776553
No 357
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=94.78 E-value=0.032 Score=45.32 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=51.6
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.|+..|...+ ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 53 ~~q~~vL~~L~~~~--~~~t~~eLa~~l~i----~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 123 (166)
T 3deu_A 53 QTHWVTLHNIHQLP--PDQSQIQLAKAIGI----EQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIA 123 (166)
T ss_dssp HHHHHHHHHHHHSC--SSEEHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHcC--CCCCHHHHHHHHCC----CHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHHH
Confidence 34667788887632 47999999999999 9999999999999999998753211111235778887776654
No 358
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=94.72 E-value=0.048 Score=42.81 Aligned_cols=68 Identities=9% Similarity=-0.025 Sum_probs=51.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|. . ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....+.+|+.+..++.
T Consensus 38 ~~~~iL~~l~-~---~~~~~~ela~~l~~----s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 105 (146)
T 2gxg_A 38 LDFLVLRATS-D---GPKTMAYLANRYFV----TQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFN 105 (146)
T ss_dssp HHHHHHHHHT-T---SCBCHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHh-c---CCcCHHHHHHHhCC----CchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHHH
Confidence 4666777777 4 48999999999999 9999999999999999998753221111234778877776553
No 359
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=94.65 E-value=0.03 Score=43.87 Aligned_cols=70 Identities=7% Similarity=0.128 Sum_probs=52.7
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.+.|+.|...|+|.....+.+.....+.+|+.+..+..
T Consensus 37 ~~~~~iL~~l~~~---~~~~~~ela~~l~~----~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (142)
T 2bv6_A 37 YPQFLVLTILWDE---SPVNVKKVVTELAL----DTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRP 106 (142)
T ss_dssp HHHHHHHHHHHHS---SEEEHHHHHHHTTC----CTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCcCHHHHHHHHCC----ChhhHHHHHHHHHHCCCEEeecCCCCcceEEEEEChHHHHHHH
Confidence 3466778888775 48999999999999 9999999999999999998753221111235778887776553
No 360
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=94.57 E-value=0.082 Score=41.30 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=50.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..+..
T Consensus 37 ~q~~vL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (140)
T 3hsr_A 37 TGYIVLMAIEND---EKLNIKKLGERVFL----DSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKS 105 (140)
T ss_dssp HHHHHHHHSCTT---CEEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTHH
T ss_pred HHHHHHHHHHHc---CCcCHHHHHHHHCC----ChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHHH
Confidence 345566666654 48999999999999 9999999999999999998753221111235788888876654
No 361
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=94.56 E-value=0.078 Score=42.58 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=52.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 54 ~q~~vL~~l~~~---~~~t~~eLa~~l~~----~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 122 (161)
T 3e6m_A 54 PKLRLLSSLSAY---GELTVGQLATLGVM----EQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLA 122 (161)
T ss_dssp HHHHHHHHHHHH---SEEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHHH
Confidence 355678888775 48999999999999 9999999999999999998753221112245788888876654
No 362
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.55 E-value=0.017 Score=45.10 Aligned_cols=69 Identities=10% Similarity=0.150 Sum_probs=51.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....|.+|+.+..+..
T Consensus 39 ~~~~iL~~l~~~---~~~t~~ela~~l~~----~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (140)
T 2nnn_A 39 TQWAALVRLGET---GPCPQNQLGRLTAM----DAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELE 107 (140)
T ss_dssp HHHHHHHHHHHH---SSBCHHHHHHHTTC----CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHHH
Confidence 466788888765 48999999999999 9999999999999999998742110001124778877765553
No 363
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=94.55 E-value=0.089 Score=41.48 Aligned_cols=71 Identities=11% Similarity=0.119 Sum_probs=44.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 42 ~q~~vL~~l~~~~-~~~~t~~eLa~~l~~----~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 112 (148)
T 3jw4_A 42 QQGRMIGYIYENQ-ESGIIQKDLAQFFGR----RGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALVE 112 (148)
T ss_dssp HHHHHHHHHHHHT-TTCCCHHHHHHC----------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCCHHHHHHHHCC----ChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHHH
Confidence 3456777776642 148999999999999 9999999999999999998753211111235677777776553
No 364
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=94.53 E-value=0.027 Score=44.96 Aligned_cols=69 Identities=9% Similarity=0.077 Sum_probs=50.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.+.....+.+|+.+..++.
T Consensus 44 ~~~~iL~~l~~~---~~~t~~ela~~l~i----~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 112 (155)
T 3cdh_A 44 PEWRVLACLVDN---DAMMITRLAKLSLM----EQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALAE 112 (155)
T ss_dssp HHHHHHHHHSSC---SCBCHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHHH
Confidence 456677777664 48999999999999 9999999999999999998742111111235778888776554
No 365
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=94.51 E-value=0.085 Score=42.21 Aligned_cols=68 Identities=7% Similarity=0.014 Sum_probs=50.6
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 52 q~~vL~~l~~~---~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 119 (159)
T 3s2w_A 52 QFPFLMRLYRE---DGINQESLSDYLKI----DKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEP 119 (159)
T ss_dssp THHHHHHHHHS---CSEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHHH
Confidence 34567777665 48999999999999 9999999999999999998753221111235778887776654
No 366
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=94.50 E-value=0.013 Score=51.70 Aligned_cols=57 Identities=18% Similarity=0.241 Sum_probs=45.7
Q ss_pred ChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 51 GVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 51 glfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
.|++.|...+ ++.|+.|||+.+|+ +..-+.|+|+.|+..|++..+ ..++|++++...
T Consensus 27 ~iL~~l~~~~--~~~~~~eia~~~gl----~kstv~r~l~tL~~~G~v~~~------~~~~Y~lg~~~~ 83 (260)
T 2o0y_A 27 DLLELFDAAH--PTRSLKELVEGTKL----PKTTVVRLVATMCARSVLTSR------ADGSYSLGPEML 83 (260)
T ss_dssp HHHTTCBTTB--SSBCHHHHHHHHCC----CHHHHHHHHHHHHHTTSEEEC------TTSCEEECHHHH
T ss_pred HHHHHHhhCC--CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEC------CCCeEEecHHHH
Confidence 4566665321 48999999999999 999999999999999999975 233899987543
No 367
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=94.45 E-value=0.023 Score=49.40 Aligned_cols=64 Identities=11% Similarity=0.116 Sum_probs=52.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.|+..|... ++.|+.+||+.+|+ ++.-+.|.|+.|...|++.... ....|.+|+.+..+..
T Consensus 153 ~~~~IL~~L~~~---~~~s~~eLA~~lgl----sksTv~r~L~~Le~~GlV~r~~-----r~~~~~LT~~G~~l~~ 216 (244)
T 2wte_A 153 EEMKLLNVLYET---KGTGITELAKMLDK----SEKTLINKIAELKKFGILTQKG-----KDRKVELNELGLNVIK 216 (244)
T ss_dssp HHHHHHHHHHHH---TCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEET-----TTTEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEeC-----CccEEEECHHHHHHHH
Confidence 455677777654 48999999999999 9999999999999999998751 3467999998887653
No 368
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=94.44 E-value=0.027 Score=44.72 Aligned_cols=69 Identities=14% Similarity=0.226 Sum_probs=52.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 41 ~~~~iL~~l~~~---~~~t~~ela~~l~~----~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 109 (152)
T 3bj6_A 41 GQRAILEGLSLT---PGATAPQLGAALQM----KRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIIT 109 (152)
T ss_dssp HHHHHHHHHHHS---TTEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHHH
Confidence 356678888775 48999999999999 9999999999999999998753221111235778877776553
No 369
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=94.42 E-value=0.027 Score=44.58 Aligned_cols=69 Identities=6% Similarity=0.062 Sum_probs=51.5
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....+.+|+.+..++.
T Consensus 43 ~~~~iL~~l~~~---~~~t~~ela~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 111 (150)
T 2rdp_A 43 PQFVALQWLLEE---GDLTVGELSNKMYL----ACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERIIE 111 (150)
T ss_dssp HHHHHHHHHHHH---CSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCC----CchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHHH
Confidence 356677888765 48999999999999 9999999999999999998743211111234778877776553
No 370
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=94.41 E-value=0.03 Score=43.97 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=49.6
Q ss_pred HhChhHHH-HhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 49 ELGVFEII-AKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 49 ~lglfd~L-~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
++.++..| ... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+.
T Consensus 39 ~~~iL~~l~~~~---~~~t~~~la~~l~~----s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (146)
T 2fbh_A 39 RWLVLLHLARHR---DSPTQRELAQSVGV----EGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLI 106 (146)
T ss_dssp HHHHHHHHHHCS---SCCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHH
T ss_pred HHHHHHHHHHcC---CCCCHHHHHHHhCC----ChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHH
Confidence 55677777 543 58999999999999 999999999999999999875321111123467777766554
No 371
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=94.33 E-value=0.066 Score=42.01 Aligned_cols=69 Identities=12% Similarity=0.173 Sum_probs=51.8
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++ |..+||+.+++ ++..+.+.++.|+..|+|.....+.....-.+.+|+.+..+..
T Consensus 37 ~~~~~iL~~l~~~---~~-~~~~la~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (144)
T 3f3x_A 37 YLDFSILKATSEE---PR-SMVYLANRYFV----TQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLL 105 (144)
T ss_dssp HHHHHHHHHHHHS---CE-EHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHC---CC-CHHHHHHHHCC----ChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHHH
Confidence 3467788888875 25 99999999999 9999999999999999998753210000125888888776654
No 372
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=94.31 E-value=0.027 Score=43.51 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=51.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.......+.+|+.+..++.
T Consensus 38 ~q~~vL~~l~~~~-~~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~i~LT~~G~~~~~ 108 (127)
T 2frh_A 38 EEFAVLTYISENK-EKEYYLKDIINHLNY----KQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIE 108 (127)
T ss_dssp HHHHHHHHHHHTC-CSEEEHHHHHHHSSS----HHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHHH
T ss_pred HHHHHHHHHHhcc-CCCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 3566777776641 148999999999999 9999999999999999998743221112235778887776554
No 373
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=94.31 E-value=0.029 Score=44.06 Aligned_cols=68 Identities=7% Similarity=0.024 Sum_probs=51.3
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..|... ++.|..+||+.+++ ++..+.+.++.|...|+|.....+.+.....+.+|+.+..+..
T Consensus 31 ~~~iL~~l~~~---~~~t~~~la~~l~~----s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 98 (144)
T 1lj9_A 31 QYLYLVRVCEN---PGIIQEKIAELIKV----DRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYP 98 (144)
T ss_dssp HHHHHHHHHHS---TTEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHC---cCcCHHHHHHHHCC----CHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHHH
Confidence 45577777775 48999999999999 9999999999999999998753221111234778887776553
No 374
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=94.28 E-value=0.025 Score=44.88 Aligned_cols=71 Identities=10% Similarity=0.111 Sum_probs=49.6
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|...+ +++|..+||+.+++ ++..+.++++.|+..|+|.....+.....-.+.+|+.+..++.
T Consensus 39 ~~q~~vL~~l~~~~--~~~t~~eLa~~l~i----~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 109 (150)
T 3fm5_A 39 VRSYSVLVLACEQA--EGVNQRGVAATMGL----DPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLRD 109 (150)
T ss_dssp HHHHHHHHHHHHST--TCCCSHHHHHHHTC----CHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCcCHHHHHHHHCC----CHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHHH
Confidence 34666777886542 47899999999999 9999999999999999998742211011124778887776654
No 375
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=94.26 E-value=0.099 Score=42.33 Aligned_cols=70 Identities=13% Similarity=0.158 Sum_probs=52.8
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 45 ~~~~~iL~~L~~~---~~~t~~eLa~~l~i----s~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 114 (168)
T 2nyx_A 45 IPQFRTLVILSNH---GPINLATLATLLGV----QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVR 114 (168)
T ss_dssp HHHHHHHHHHHHH---CSEEHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCCCHHHHHHHhCC----CHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHH
Confidence 3466778888775 48999999999999 9999999999999999998743221111234778887776553
No 376
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=94.25 E-value=0.057 Score=42.77 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=40.1
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
++.|+++||+.+++ ++..++++|..|...|+|.... | ..|.|+++....
T Consensus 27 ~~~s~~~IA~~~~i----~~~~l~kil~~L~~aGlv~s~r---G-~~GGy~Lar~p~ 75 (143)
T 3t8r_A 27 GCISLKSIAEENNL----SDLYLEQLVGPLRNAGLIRSVR---G-AKGGYQLRVPAE 75 (143)
T ss_dssp CCEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEECS---S-SSSEEEESSCGG
T ss_pred CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCEEEecC---C-CCCCeeecCCcc
Confidence 48999999999999 9999999999999999998541 1 246788775443
No 377
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=94.22 E-value=0.043 Score=44.35 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=39.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
++.|+++||+.+++ ++..++++|..|...|+|.... | ..|.|.++..
T Consensus 43 ~~~s~~eIA~~~~i----~~~~l~kil~~L~~aGlv~s~r---G-~~GGy~Lar~ 89 (159)
T 3lwf_A 43 GPISLRSIAQDKNL----SEHYLEQLIGPLRNAGIVKSIR---G-AHGGYVLNGD 89 (159)
T ss_dssp CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEC---S-TTCEEEECSC
T ss_pred CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCeEEEec---C-CCCceEecCC
Confidence 48999999999999 9999999999999999998642 1 2466887643
No 378
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=94.20 E-value=0.021 Score=42.38 Aligned_cols=47 Identities=11% Similarity=0.350 Sum_probs=40.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|+..|... ++.|+.+||+.+++ ++..+.+.|+.|...|+|...
T Consensus 21 ~~~~il~~l~~~---~~~s~~ela~~l~i----s~~tv~~~l~~L~~~glv~~~ 67 (109)
T 1sfx_A 21 SDVRIYSLLLER---GGMRVSEIARELDL----SARFVRDRLKVLLKRGFVRRE 67 (109)
T ss_dssp HHHHHHHHHHHH---CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEE
Confidence 456677777664 48999999999999 999999999999999999874
No 379
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=94.19 E-value=0.029 Score=45.11 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=52.6
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.|+..|... ++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 52 ~~~~~iL~~l~~~---~~~t~~ela~~l~i----s~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 121 (162)
T 3cjn_A 52 TAKMRALAILSAK---DGLPIGTLGIFAVV----EQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYD 121 (162)
T ss_dssp HHHHHHHHHHHHS---CSEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHC---CCCCHHHHHHHHCC----ChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 3466788888775 48999999999999 9999999999999999998743211112235778877775553
No 380
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=94.17 E-value=0.027 Score=43.97 Aligned_cols=71 Identities=14% Similarity=0.169 Sum_probs=52.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.++++.|+..|+|.....+.+.....+.+|+.+..++.
T Consensus 32 ~~~~vL~~l~~~~-~~~~t~~ela~~l~~----~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~~ 102 (139)
T 3eco_A 32 EQGHTLGYLYAHQ-QDGLTQNDIAKALQR----TGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVE 102 (139)
T ss_dssp HHHHHHHHHHHST-TTCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CCCcCHHHHHHHhCC----CcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHHH
Confidence 4566778887652 138999999999999 9999999999999999998753221111235778887776654
No 381
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=94.15 E-value=0.13 Score=40.75 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=50.8
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.|+..|... ++.|..+||+.+++ ++..+.+.|+.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 39 ~~~iL~~l~~~---~~~t~~ela~~l~~----s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (155)
T 1s3j_A 39 QLFVLASLKKH---GSLKVSEIAERMEV----KPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFE 106 (155)
T ss_dssp HHHHHHHHHHH---SEEEHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHHH
Confidence 45577888764 48999999999999 9999999999999999998753211111235777777765553
No 382
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=94.14 E-value=0.019 Score=50.42 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=49.0
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
+.|++.|...+ ++.|+.|||+.+|+ +..-+.|+|+.|+..|++.++ ++.|++++....+.
T Consensus 17 l~iL~~l~~~~--~~~~~~eia~~~gl----~~stv~r~l~~L~~~G~v~~~-------~~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 17 FAVLLAFDAQR--PNPTLAELATEAGL----SRPAVRRILLTLQKLGYVAGS-------GGRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHTCSSSC--SSCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-------TTEEEECGGGHHHH
T ss_pred HHHHHHHHhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEeC-------CCEEEEcHHHHHHH
Confidence 35667775432 48999999999999 999999999999999999974 47899998765444
No 383
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=94.11 E-value=0.044 Score=42.78 Aligned_cols=71 Identities=8% Similarity=0.193 Sum_probs=51.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 35 ~~~~iL~~l~~~~-~~~~~~~ela~~l~~----~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~~ 105 (141)
T 3bro_A 35 TQMTIIDYLSRNK-NKEVLQRDLESEFSI----KSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLET 105 (141)
T ss_dssp HHHHHHHHHHHTT-TSCCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHH
T ss_pred HHHHHHHHHHHCC-CCCcCHHHHHHHHCC----CcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHHH
Confidence 3556777787742 127999999999999 9999999999999999998753221111235777877765543
No 384
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=94.10 E-value=0.021 Score=42.13 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=44.5
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChh
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~ 117 (369)
--.++.|+..|... ++.++.+||+.+|+ .+..+.+.|+.|... ++..... | ....|++++.
T Consensus 26 ~~~Rl~IL~~l~~~---~~~~~~ela~~l~i----s~stvs~hL~~L~~~-lv~~~~~--g-r~~~y~l~~~ 86 (99)
T 2zkz_A 26 HPMRLKIVNELYKH---KALNVTQIIQILKL----PQSTVSQHLCKMRGK-VLKRNRQ--G-LEIYYSINNP 86 (99)
T ss_dssp SHHHHHHHHHHHHH---SCEEHHHHHHHHTC----CHHHHHHHHHHHBTT-TBEEEEE--T-TEEEEECCCH
T ss_pred CHHHHHHHHHHHHC---CCcCHHHHHHHHCc----CHHHHHHHHHHHHHH-hhhheEe--C-cEEEEEEChH
Confidence 34566677554433 48999999999999 999999999999999 9875421 1 1235777654
No 385
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=94.09 E-value=0.031 Score=44.08 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=53.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 41 ~~~~iL~~l~~~---~~~~~~~la~~l~~----~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~LT~~G~~~~~ 109 (147)
T 1z91_A 41 PQYLALLLLWEH---ETLTVKKMGEQLYL----DSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKE 109 (147)
T ss_dssp HHHHHHHHHHHH---SEEEHHHHHHTTTC----CHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGG
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHCC----CcCcHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHhHHHHHH
Confidence 466677888765 48999999999999 9999999999999999998753221112235788888887665
No 386
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=94.06 E-value=0.021 Score=45.42 Aligned_cols=69 Identities=10% Similarity=0.071 Sum_probs=50.4
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
..++.++..|... ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.+.....+.+|+.+..++
T Consensus 41 ~~q~~iL~~l~~~---~~~~~~eLa~~l~~----~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 109 (149)
T 4hbl_A 41 YSQYLVMLTLWEE---NPQTLNSIGRHLDL----SSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQ 109 (149)
T ss_dssp HHHHHHHHHHHHS---SSEEHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHH
T ss_pred HHHHHHHHHHHHC---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHH
Confidence 3467778888775 48999999999999 999999999999999999875321111123577887777654
No 387
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=94.03 E-value=0.035 Score=43.68 Aligned_cols=69 Identities=14% Similarity=0.284 Sum_probs=49.2
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.|+..|... +.|..+||+.+++ ++..+.++|+.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 38 ~~~~~iL~~l~~~----~~t~~eLa~~l~~----s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~~ 106 (146)
T 3tgn_A 38 NTQEHILMLLSEE----SLTNSELARRLNV----SQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAE 106 (146)
T ss_dssp HHHHHHHHHHTTC----CCCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHHH
T ss_pred HHHHHHHHHHHhC----CCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHHH
Confidence 4566778888763 4999999999999 9999999999999999998743211112245777777765553
No 388
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=94.01 E-value=0.032 Score=44.37 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=51.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.......+.+|+.+..+..
T Consensus 48 ~~~~iL~~l~~~---~~~t~~ela~~l~~----s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 116 (153)
T 2pex_A 48 PQYLVMLVLWET---DERSVSEIGERLYL----DSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALRS 116 (153)
T ss_dssp HHHHHHHHHHHS---CSEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGGG
T ss_pred HHHHHHHHHHhC---CCcCHHHHHHHhCC----CcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHHH
Confidence 456678888775 48999999999999 9999999999999999998742211111235788888886665
No 389
>3u1d_A Uncharacterized protein; GNTR-superfamily, structural genomics, PSI-biology, midwest for structural genomics, MCSG; 1.80A {Halomicrobium mukohataei}
Probab=94.00 E-value=0.068 Score=42.51 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=52.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCC-CCCCCCcccHHHHHHHHhcCccccccccCC-----CCCCcceecChhchhh
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMP-SRNPNTGVMLDRILRLLVTNRVLRCSLSSA-----GDNQRLYSLAPVAKYF 121 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~-~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~-----~~~~~~y~~t~~~~~~ 121 (369)
.++.|+..|...+ .+..|+++|++.++ + ...-+.+.|+.|+..|+|.....+. +.....|.+|+.+...
T Consensus 30 tR~~IL~~Ll~~p-~~~~ta~eL~~~l~~l----S~aTVyrhL~~L~eaGLV~~~~~~~~~~~rGrP~k~Y~LT~~Gr~~ 104 (151)
T 3u1d_A 30 TRLDVLHQILAQP-DGVLSVEELLYRNPDE----TEANLRYHVDELVDRGIVEKIPVPRAKSVDDPPTTFYAVTGEGIAL 104 (151)
T ss_dssp HHHHHHHHHHHST-TSCBCHHHHHHHCTTS----CHHHHHHHHHHHHHTTSEEEEECCCCTTSSSCCCEEEEECHHHHHH
T ss_pred HHHHHHHHHHcCC-CCCCCHHHHHHhcCCC----CHHHHHHHHHHHHHCCCeEEeecCcCcccCCCCceEEEECHHHHHH
Confidence 4566777776532 24689999999998 8 9999999999999999998642221 1122379999999966
Q ss_pred hc
Q 017595 122 VL 123 (369)
Q Consensus 122 ~~ 123 (369)
+.
T Consensus 105 l~ 106 (151)
T 3u1d_A 105 LR 106 (151)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 390
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=93.87 E-value=0.024 Score=44.09 Aligned_cols=69 Identities=10% Similarity=0.143 Sum_probs=50.7
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 30 ~~~~iL~~l~~~---~~~~~~ela~~l~~----s~~tvs~~l~~L~~~glv~~~~~~~d~R~~~~~lT~~G~~~~~ 98 (138)
T 3bpv_A 30 AQVACLLRIHRE---PGIKQDELATFFHV----DKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIP 98 (138)
T ss_dssp HHHHHHHHHHHS---TTCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHTHH
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeecCCCCceeEEeeECHhHHHHHH
Confidence 355677778775 48999999999999 9999999999999999998742110001123677777765553
No 391
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=93.81 E-value=0.017 Score=50.93 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=46.8
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
+.|++.|...+ ++.|+.|||+.+|+ +..-+.|+|+.|+..|++.++ ++.|++++...
T Consensus 24 l~iL~~l~~~~--~~~~~~eia~~~gl----~~stv~r~l~tL~~~G~v~~~-------~~~Y~Lg~~~~ 80 (265)
T 2ia2_A 24 LAVIRCFDHRN--QRRTLSDVARATDL----TRATARRFLLTLVELGYVATD-------GSAFWLTPRVL 80 (265)
T ss_dssp HHHHHTCCSSC--SSEEHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEES-------SSEEEECGGGG
T ss_pred HHHHHHHHhCC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEec-------CCEEEEcHHHH
Confidence 35667775432 48999999999999 999999999999999999974 47899987643
No 392
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=93.74 E-value=0.023 Score=44.43 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=51.5
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.......+.+|+.+..+..
T Consensus 37 ~~~~iL~~l~~~---~~~t~~ela~~l~~----s~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (142)
T 2fbi_A 37 QQWRVIRILRQQ---GEMESYQLANQACI----LRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFV 105 (142)
T ss_dssp HHHHHHHHHHHH---CSEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCC----CHhHHHHHHHHHHHCCCEEeecCCCCCCeeEEEECHHHHHHHH
Confidence 466778888775 48999999999999 9999999999999999998742210001124777777776553
No 393
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=93.72 E-value=0.025 Score=44.43 Aligned_cols=70 Identities=7% Similarity=0.109 Sum_probs=52.1
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
..++.++..|... ++.|..+||+.+++ ++..+.+.++.|+..|+|.....+.+.....|.+|+.+..+..
T Consensus 33 ~~~~~iL~~l~~~---~~~~~~~la~~l~~----s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (145)
T 2a61_A 33 PAQFDILQKIYFE---GPKRPGELSVLLGV----AKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIE 102 (145)
T ss_dssp HHHHHHHHHHHHH---CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCCCHHHHHHHHCC----CchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHHHH
Confidence 3466778888765 48999999999999 9999999999999999998742210001124778887776553
No 394
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=93.72 E-value=0.031 Score=39.61 Aligned_cols=49 Identities=12% Similarity=0.226 Sum_probs=41.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhC-----CCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQM-----PSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~-----~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.+..|++.|...+ +++.|++||++.+ ++ +..-+.|.|+.|+..|+|...
T Consensus 18 ~r~~IL~~l~~~~-~~~~s~~el~~~l~~~~~~i----s~~TVyR~L~~L~~~Glv~~~ 71 (83)
T 2fu4_A 18 PRLKILEVLQEPD-NHHVSAEDLYKRLIDMGEEI----GLATVYRVLNQFDDAGIVTRH 71 (83)
T ss_dssp HHHHHHHHHTSGG-GSSBCHHHHHHHHHHTTCCC----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHhCC-CCCCCHHHHHHHHHHhCCCC----CHhhHHHHHHHHHHCCCeEEE
Confidence 4566888887531 0389999999999 88 999999999999999999875
No 395
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=93.71 E-value=0.062 Score=39.07 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=50.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHH-hCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAA-QMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~-~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.|+-.|... ++.|+.+||+ .+++ +..-+.|-++.|...|+|+.+ +++ ..+|+.+..++.
T Consensus 17 ~QfsiL~~L~~~---~~~t~~~Lae~~l~~----drstvsrnl~~L~r~GlVe~~------~~D-l~LT~~G~~~l~ 79 (95)
T 1bja_A 17 KTATILITIAKK---DFITAAEVREVHPDL----GNAVVNSNIGVLIKKGLVEKS------GDG-LIITGEAQDIIS 79 (95)
T ss_dssp HHHHHHHHHHHS---TTBCHHHHHHTCTTS----CHHHHHHHHHHHHTTTSEEEE------TTE-EEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHhcc----cHHHHHHHHHHHHHCCCeecC------CCC-eeeCHhHHHHHH
Confidence 355677778776 3899999999 9999 999999999999999999832 233 888988887664
No 396
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=93.55 E-value=0.044 Score=43.88 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=49.8
Q ss_pred HHhChhHHHH-hcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIA-KAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~-~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|. .. ++.|..+||+.+++ ++..+.++++.|+..|+|.....+.+.....+.+|+.+..+..
T Consensus 48 ~~~~iL~~L~~~~---~~~~~~ela~~l~i----~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 117 (160)
T 3boq_A 48 AKFDAMAQLARNP---DGLSMGKLSGALKV----TNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTFK 117 (160)
T ss_dssp HHHHHHHHHHHCT---TCEEHHHHHHHCSS----CCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHcC---CCCCHHHHHHHHCC----ChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHHH
Confidence 4667888884 43 48999999999999 9999999999999999998742211111234778877776553
No 397
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=93.52 E-value=0.06 Score=39.34 Aligned_cols=55 Identities=18% Similarity=0.163 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 62 GAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 62 ~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
+++.+..+||+.+++ +...|.|.|..|...|+|.....++ ..+...+|+.+..++
T Consensus 34 g~~~s~~eLa~~l~l----~~stLsR~l~rLe~~GLV~r~~~~D--~R~~v~LT~~G~~~l 88 (96)
T 2obp_A 34 ATPWSLPKIAKRAQL----PMSVLRRVLTQLQAAGLADVSVEAD--GRGHASLTQEGAALA 88 (96)
T ss_dssp CCCCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECTT--SCEEEEECHHHHHHH
T ss_pred CCCcCHHHHHHHhCC----chhhHHHHHHHHHHCCCEEeecCCC--CceeEEECHHHHHHH
Confidence 358999999999999 9999999999999999998754322 234567777777554
No 398
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=93.46 E-value=0.076 Score=42.34 Aligned_cols=69 Identities=14% Similarity=0.071 Sum_probs=50.6
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++-.|...+ ++.+..+||+.+++ ++..+.++++-|+..|+|.....+.........+|+.+..++.
T Consensus 33 q~~vL~~L~~~~--~~~~~~eLa~~l~~----~~~tvs~~v~~Le~~GlV~R~~~~~DrR~~~l~LT~~G~~~~~ 101 (151)
T 4aik_A 33 HWVTLYNINRLP--PEQSQIQLAKAIGI----EQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPIIE 101 (151)
T ss_dssp HHHHHHHHHHSC--TTSCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECGGGHHHHH
T ss_pred HHHHHHHHHHcC--CCCcHHHHHHHHCc----CHHHHHHHHHHHHhCCCeEeecCCCCCcchhhhcCHHHHHHHH
Confidence 445666776543 36788999999999 9999999999999999998753221111235778888876654
No 399
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=93.32 E-value=0.036 Score=40.38 Aligned_cols=64 Identities=13% Similarity=0.061 Sum_probs=47.4
Q ss_pred hhHHHHhcCCCCCCCHHHHHHhCCCCCCCCccc-HHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 52 VFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVM-LDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 52 lfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~-l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++..|...+ .+.|..+||+.+++ ++.. +.+.|+.|+..|+|..+..+ .....+.+|+.+..+..
T Consensus 20 ~L~~l~~~~--~~~t~~eLa~~l~i----s~~t~vs~~l~~Le~~Glv~~~~~d--rR~~~~~LT~~G~~~~~ 84 (95)
T 2pg4_A 20 TLLEFEKKG--YEPSLAEIVKASGV----SEKTFFMGLKDRLIRAGLVKEETLS--YRVKTLKLTEKGRRLAE 84 (95)
T ss_dssp HHHHHHHTT--CCCCHHHHHHHHCC----CHHHHHTTHHHHHHHTTSEEEEEEE--TTEEEEEECHHHHHHHH
T ss_pred HHHHHHhcC--CCCCHHHHHHHHCC----CchHHHHHHHHHHHHCCCeecCCCC--CCeEEEEECHhHHHHHH
Confidence 455565542 27999999999999 9999 99999999999999843211 11235788888776553
No 400
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=93.22 E-value=0.089 Score=42.60 Aligned_cols=49 Identities=20% Similarity=0.298 Sum_probs=40.5
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
+++|.++||+.+++ ++..+.++|..|...|+|.... ...|.|+++....
T Consensus 27 ~~~s~~~IA~~~~i----s~~~l~kil~~L~~aGlv~s~r----G~~GGy~Lar~p~ 75 (162)
T 3k69_A 27 SKVASRELAQSLHL----NPVMIRNILSVLHKHGYLTGTV----GKNGGYQLDLALA 75 (162)
T ss_dssp SCBCHHHHHHHHTS----CGGGTHHHHHHHHHTTSSEEEC----STTCEEECCSCGG
T ss_pred CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEeec----CCCCCeEecCChh
Confidence 48999999999999 9999999999999999997642 1345688876543
No 401
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=93.17 E-value=0.065 Score=44.50 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=55.3
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
+..++.++..|...+ +++.|..+||+.+++ ++..+.++++.|+..|+|.....+.......+.+|+.+..++.
T Consensus 40 t~~q~~vL~~L~~~~-~~~~t~~eLa~~l~i----s~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 112 (189)
T 3nqo_A 40 TSRQYMTILSILHLP-EEETTLNNIARKMGT----SKQNINRLVANLEKNGYVDVIPSPHDKRAINVKVTDLGKKVMV 112 (189)
T ss_dssp CHHHHHHHHHHHHSC-GGGCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHhcc-CCCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHH
Confidence 455777888887521 148999999999999 9999999999999999998753221112245889988886654
No 402
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=93.11 E-value=0.043 Score=42.24 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=41.0
Q ss_pred HHhChhHHHHhcCCCCC-CCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAK-LSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~-~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.+..|+..|...+ +| .|+.+||+.+++ +..-+.|.|+.|...|+|...
T Consensus 27 ~e~~il~~L~~~~--~~~~t~~eLa~~l~~----s~sTV~r~L~~L~~~GlV~r~ 75 (123)
T 3r0a_A 27 ADLNVMKSFLNEP--DRWIDTDALSKSLKL----DVSTVQRSVKKLHEKEILQRS 75 (123)
T ss_dssp HHHHHHHHHHHST--TCCEEHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHCC--CCCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEee
Confidence 3566778887653 35 899999999999 999999999999999999864
No 403
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=92.98 E-value=0.058 Score=44.34 Aligned_cols=72 Identities=13% Similarity=0.181 Sum_probs=50.4
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.|+..|...++.++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.......+.+|+.+..++.
T Consensus 70 ~~~~iL~~L~~~~~~~~~t~~eLa~~l~i----s~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 141 (181)
T 2fbk_A 70 AGWDLLLTLYRSAPPEGLRPTELSALAAI----SGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVT 141 (181)
T ss_dssp HHHHHHHHHHHHCCSSCBCHHHHHHHCSC----CSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHCC----CHHHHHHHHHHHHHCcCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 36667888877531013999999999999 9999999999999999998742211111234777777775553
No 404
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=92.79 E-value=0.054 Score=41.21 Aligned_cols=47 Identities=13% Similarity=0.187 Sum_probs=40.7
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
-.++.|+..|.+ ++.|+.+||+.+++ .+..+.+.|+.|...|++...
T Consensus 32 ~~~~~il~~L~~----~~~s~~ela~~l~i----s~stvsr~l~~Le~~Glv~~~ 78 (119)
T 2lkp_A 32 PSRLMILTQLRN----GPLPVTDLAEAIGM----EQSAVSHQLRVLRNLGLVVGD 78 (119)
T ss_dssp HHHHHHHHHHHH----CCCCHHHHHHHHSS----CHHHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHH----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 346677778876 37999999999999 999999999999999999764
No 405
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=92.78 E-value=0.08 Score=41.34 Aligned_cols=49 Identities=6% Similarity=-0.037 Sum_probs=42.6
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
++.|..+||+.+++ ++..+.+.|+.|...|+|... .+.|.+|+.+..+.
T Consensus 30 ~~~s~~ela~~l~i----s~~tv~~~l~~Le~~Gli~r~-------~~~~~Lt~~g~~~~ 78 (139)
T 2x4h_A 30 EGAKINRIAKDLKI----APSSVFEEVSHLEEKGLVKKK-------EDGVWITNNGTRSI 78 (139)
T ss_dssp SCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-------TTEEEECHHHHHHH
T ss_pred CCcCHHHHHHHhCC----ChHHHHHHHHHHHHCCCEEec-------CCeEEEChhHHHHH
Confidence 48999999999999 999999999999999999874 26788888776544
No 406
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.71 E-value=0.12 Score=46.36 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=37.5
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS 247 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 247 (369)
+..++..+. .....|||++||+|.++.+++... .+++++|+ +..++.+++
T Consensus 225 ~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 225 AERLVRMFS--FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHH
Confidence 445555443 355799999999999999988764 58999998 777766543
No 407
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=92.69 E-value=0.062 Score=42.87 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=39.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhch
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAK 119 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~ 119 (369)
++.|+.+||+.+++ ++..++++|..|...|+|.... +.|.|.++....
T Consensus 29 ~~~~~~~iA~~~~i----~~~~l~kil~~L~~~Glv~s~r-----G~GGy~L~~~p~ 76 (149)
T 1ylf_A 29 SLCTSDYMAESVNT----NPVVIRKIMSYLKQAGFVYVNR-----GPGGAGLLKDLH 76 (149)
T ss_dssp GGCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEC--------CCEEESSCGG
T ss_pred CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCcEEEcc-----CCCceEeCCChh
Confidence 48999999999999 9999999999999999998642 256788776543
No 408
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=92.52 E-value=0.094 Score=44.14 Aligned_cols=70 Identities=9% Similarity=0.186 Sum_probs=52.2
Q ss_pred HHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCC--CCCCcceecChhch
Q 017595 42 ASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSA--GDNQRLYSLAPVAK 119 (369)
Q Consensus 42 ~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~--~~~~~~y~~t~~~~ 119 (369)
.+|..-.++.|+..|.. +|.|+.+||+.+|+ ++..+.+.|+.|...|+|....... +.....|++|+...
T Consensus 10 kaL~~~~rl~IL~~L~~----~~~s~~eLa~~l~i----s~stvs~hLk~Le~~GLV~~~~~~~~~g~~~~~Y~Lt~~~~ 81 (202)
T 2p4w_A 10 DVLGNETRRRILFLLTK----RPYFVSELSRELGV----GQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKGLR 81 (202)
T ss_dssp HHHHSHHHHHHHHHHHH----SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECTTEE
T ss_pred HHhCCHHHHHHHHHHHh----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCceEEEeeccCCCCceEEEEEChHHH
Confidence 34444566777777865 48999999999999 9999999999999999998743210 11234688877654
No 409
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=92.14 E-value=0.16 Score=40.43 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=45.3
Q ss_pred hHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 53 FEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 53 fd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
...|... ++.|..+||+.+++ ++..+.+.|+.|...|+|... .+..+.+|+.+..+.
T Consensus 46 ~~~l~~~---~~~~~~~la~~l~v----s~~tvs~~l~~Le~~Glv~r~------~~~~~~lT~~g~~~~ 102 (155)
T 2h09_A 46 SDLIREV---GEARQVDMAARLGV----SQPTVAKMLKRLATMGLIEMI------PWRGVFLTAEGEKLA 102 (155)
T ss_dssp HHHHHHH---SCCCHHHHHHHHTS----CHHHHHHHHHHHHHTTCEEEE------TTTEEEECHHHHHHH
T ss_pred HHHHHhC---CCcCHHHHHHHhCc----CHHHHHHHHHHHHHCCCEEEe------cCCceEEChhHHHHH
Confidence 3355443 37899999999999 999999999999999999864 235678887776554
No 410
>2esh_A Conserved hypothetical protein TM0937; APC5794, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.4.5.61
Probab=92.12 E-value=0.24 Score=37.60 Aligned_cols=72 Identities=13% Similarity=0.185 Sum_probs=53.5
Q ss_pred HHHHHHhChhHHHHhcCCCCCCCHHHHHHhCC--------CCCCCCc-ccHHHHHHHHhcCccccccccC-CCCCCccee
Q 017595 44 MQAAAELGVFEIIAKAGPGAKLSAAQIAAQMP--------SRNPNTG-VMLDRILRLLVTNRVLRCSLSS-AGDNQRLYS 113 (369)
Q Consensus 44 l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~--------~~~~~~~-~~l~~~L~~L~~~g~l~~~~~~-~~~~~~~y~ 113 (369)
+....++-|+..|.. +|.+.-+|++.++ + .+ ..+.+.|+-|...|+|.....+ .+.....|.
T Consensus 10 ~~~~~~~~IL~~L~~----~~~~gyel~~~l~~~g~~~~~i----s~~~tly~~L~~Le~~GlI~~~~~~~~~~~r~~Y~ 81 (118)
T 2esh_A 10 RGWWLASTILLLVAE----KPSHGYELAERLAEFGIEIPGI----GHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYR 81 (118)
T ss_dssp HHHHHHHHHHHHHHH----SCBCHHHHHHHHHTTCCSSTTC----CCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEE
T ss_pred ccchHHHHHHHHHHc----CCCCHHHHHHHHHHhCCcccCC----CCcchHHHHHHHHHHCCCeEEEeecCCCCCceEEE
Confidence 444566777888876 4899999999873 6 78 8999999999999999865321 112234699
Q ss_pred cChhchhhhc
Q 017595 114 LAPVAKYFVL 123 (369)
Q Consensus 114 ~t~~~~~~~~ 123 (369)
+|+.+...+.
T Consensus 82 LT~~G~~~l~ 91 (118)
T 2esh_A 82 ITPQGKLYLR 91 (118)
T ss_dssp ECHHHHHHHH
T ss_pred EChHHHHHHH
Confidence 9998886553
No 411
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=92.06 E-value=0.089 Score=36.15 Aligned_cols=54 Identities=13% Similarity=0.276 Sum_probs=45.6
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
-.|++.|.+.| .|++..+||+.+|+ +..-+...|..|-..|.|..+ ..-+|.++
T Consensus 22 ekVLe~LkeaG--~PlkageIae~~Gv----dKKeVdKaik~LKkEgkI~SP------kRCyw~~~ 75 (80)
T 2lnb_A 22 QRILQVLTEAG--SPVKLAQLVKECQA----PKRELNQVLYRMKKELKVSLT------SPATWCLG 75 (80)
T ss_dssp HHHHHHHHHHT--SCEEHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEE------ETTEEEES
T ss_pred HHHHHHHHHcC--CCCCHHHHHHHHCC----CHHHHHHHHHHHHHcCCccCC------CCceeeCC
Confidence 35677777764 69999999999999 999999999999999999865 35678776
No 412
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=92.05 E-value=0.078 Score=38.57 Aligned_cols=53 Identities=13% Similarity=0.241 Sum_probs=41.5
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
+.|..+||+.+++ ++..+.++|+.|...|+|... .+ + ....|.+|+.+..+..
T Consensus 30 ~~t~~eLa~~l~i----~~~tvs~~l~~Le~~Glv~~~-~d-~-R~~~v~LT~~G~~~~~ 82 (95)
T 2qvo_A 30 DVYIQYIASKVNS----PHSYVWLIIKKFEEAKMVECE-LE-G-RTKIIRLTDKGQKIAQ 82 (95)
T ss_dssp CEEHHHHHHHSSS----CHHHHHHHHHHHHHTTSEEEE-EE-T-TEEEEEECHHHHHHHH
T ss_pred CcCHHHHHHHHCc----CHHHHHHHHHHHHHCcCccCC-CC-C-CeEEEEEChhHHHHHH
Confidence 4899999999999 999999999999999999321 11 0 1235889988876653
No 413
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=91.94 E-value=0.055 Score=42.95 Aligned_cols=70 Identities=9% Similarity=0.119 Sum_probs=48.5
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..|...+ +++.|..+||+.+++ ++..+.++++-|+..|+|.....+.........+|+.+..++.
T Consensus 37 q~~vL~~L~~~~-~~~~t~~eLa~~l~~----~~~tvs~~v~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 106 (147)
T 4b8x_A 37 RYEALVLLTFSK-SGELPMSKIGERLMV----HPTSVTNTVDRLVRSGLVAKRPNPNDGRGTLATITDKGREVVE 106 (147)
T ss_dssp HHHHHHHHHTSG-GGEEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEEECC----CEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHCC-CCCcCHHHHHHHHCC----CHHHHHHHHHHHHhCCCEEEeecCCcCceeEEEECHHHHHHHH
Confidence 334555554321 247999999999999 9999999999999999998753221111234777887776553
No 414
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=91.93 E-value=0.077 Score=44.83 Aligned_cols=69 Identities=14% Similarity=-0.021 Sum_probs=51.6
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.|+..|... ++.|..+||+.+++ ++..+.++|+.|+..|+|.....+.....-.+.+|+.+..++.
T Consensus 49 ~q~~iL~~L~~~---~~~t~~eLa~~l~i----~~stvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 117 (207)
T 2fxa_A 49 NEHHILWIAYQL---NGASISEIAKFGVM----HVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFW 117 (207)
T ss_dssp HHHHHHHHHHHH---TSEEHHHHHHHTTC----CHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEecCCCCCceEEEEECHHHHHHHH
Confidence 356677888765 48999999999999 9999999999999999998753221111236788888876654
No 415
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=91.28 E-value=0.048 Score=46.98 Aligned_cols=71 Identities=7% Similarity=0.159 Sum_probs=52.5
Q ss_pred HHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCC---CCCCcceecChh
Q 017595 41 PASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSA---GDNQRLYSLAPV 117 (369)
Q Consensus 41 ~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~---~~~~~~y~~t~~ 117 (369)
..+|..-.++.|+..|.. +|.|+.+||+.+|+ .+..+.+.|+.|...|+|....... |.....|++++.
T Consensus 6 lkaL~~~~R~~IL~~L~~----g~~s~~ELa~~lgl----S~stVs~hL~~Le~aGLV~~~~~~gr~~GRp~~~Y~Lt~~ 77 (232)
T 2qlz_A 6 FYILGNKVRRDLLSHLTC----MECYFSLLSSKVSV----SSTAVAKHLKIMEREGVLQSYEKEERFIGPTKKYYKISIA 77 (232)
T ss_dssp HHHHTSHHHHHHHHHHTT----TTTCSSSSCTTCCC----CHHHHHHHHHHHHHTTSEEEEEECC-----CEEEEEECCC
T ss_pred HHHhCCHHHHHHHHHHHh----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEeeecCCCCCCccEEEEEccc
Confidence 344555567788888875 48999999999999 9999999999999999998621110 001235888876
Q ss_pred ch
Q 017595 118 AK 119 (369)
Q Consensus 118 ~~ 119 (369)
+.
T Consensus 78 ~~ 79 (232)
T 2qlz_A 78 KS 79 (232)
T ss_dssp EE
T ss_pred hh
Confidence 54
No 416
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=91.02 E-value=0.22 Score=35.95 Aligned_cols=48 Identities=19% Similarity=0.305 Sum_probs=39.9
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
++.|+..|...+. .+++..+|+.++++ +..-+.++|+.|...|+|...
T Consensus 22 q~~Vl~~I~~~g~-~gi~qkeLa~~~~l----~~~tvt~iLk~LE~kglIkr~ 69 (91)
T 2dk5_A 22 EKLVYQIIEDAGN-KGIWSRDVRYKSNL----PLTEINKILKNLESKKLIKAV 69 (91)
T ss_dssp HHHHHHHHHHHCT-TCEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCC-CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEe
Confidence 4557777776321 27999999999999 999999999999999999854
No 417
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=90.99 E-value=0.13 Score=40.79 Aligned_cols=46 Identities=22% Similarity=0.315 Sum_probs=41.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 4 ~~~~il~~L~~~---~~~~~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 49 (150)
T 2pn6_A 4 IDLRILKILQYN---AKYSLDEIAREIRI----PKATLSYRIKKLEKDGVIKG 49 (150)
T ss_dssp HHHHHHHHHTTC---TTSCHHHHHHHHTS----CHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCcEEE
Confidence 456788888775 48999999999999 99999999999999999985
No 418
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=90.93 E-value=0.12 Score=38.66 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=39.0
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
++.|+..|...| .+.|..+||+.+|+ +...+++.|..|...|+|...
T Consensus 20 ~l~Il~~l~~~g--~~~s~~eLa~~lgv----s~~tV~~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 20 VIDVLRILLDKG--TEMTDEEIANQLNI----KVNDVRKKLNLLEEQGFVSYR 66 (110)
T ss_dssp THHHHHHHHHHC--SCBCHHHHHHTTTS----CHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHcC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 455677764432 37999999999999 999999999999999999764
No 419
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=90.88 E-value=0.15 Score=40.41 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=41.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++...
T Consensus 8 ~~~~iL~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~~ 54 (150)
T 2w25_A 8 IDRILVRELAAD---GRATLSELATRAGL----SVSAVQSRVRRLESRGVVQGY 54 (150)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 456788888775 58999999999999 999999999999999999753
No 420
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=90.88 E-value=0.19 Score=39.68 Aligned_cols=47 Identities=21% Similarity=0.196 Sum_probs=38.9
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchh
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKY 120 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~ 120 (369)
+ |+++||+..++ ++..++++|..|...|+|.... +.|.|+++.....
T Consensus 24 ~-s~~~IA~~~~i----~~~~l~kIl~~L~~aGlv~s~r-----G~GGy~Lar~p~~ 70 (145)
T 1xd7_A 24 T-SSEIIADSVNT----NPVVVRRMISLLKKADILTSRA-----GVPGASLKKDPAD 70 (145)
T ss_dssp C-CHHHHHHHHTS----CHHHHHHHHHHHHHTTSEECCS-----SSSSCEESSCGGG
T ss_pred C-CHHHHHHHHCc----CHHHHHHHHHHHHHCCceEeec-----CCCCceecCCHHH
Confidence 5 99999999999 9999999999999999998642 2466777755443
No 421
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=90.88 E-value=0.099 Score=42.26 Aligned_cols=71 Identities=10% Similarity=0.110 Sum_probs=48.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.++++.|+..|+|.....+.....-.+.+|+.+..++.
T Consensus 47 ~q~~vL~~l~~~~-~~~~t~~eLa~~l~~----~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 117 (168)
T 3u2r_A 47 QQYNTLRLLRSVH-PEGMATLQIADRLIS----RAPDITRLIDRLDDRGLVLRTRKPENRRVVEVALTDAGLKLLK 117 (168)
T ss_dssp HHHHHHHHHHHHT-TSCEEHHHHHHHC-------CTHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CCCcCHHHHHHHHCC----ChhhHHHHHHHHHHCCCEeecCCCCCCCeeEeEECHHHHHHHH
Confidence 4666777887641 138999999999999 9999999999999999998753210000124778877776554
No 422
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=90.54 E-value=0.17 Score=39.82 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=40.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|++.|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 6 ~d~~il~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 51 (144)
T 2cfx_A 6 IDLNIIEELKKD---SRLSMRELGRKIKL----SPPSVTERVRQLESFGIIKQ 51 (144)
T ss_dssp HHHHHHHHHHHC---SCCCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEE
Confidence 355688888875 58999999999999 99999999999999999985
No 423
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=90.09 E-value=0.21 Score=41.66 Aligned_cols=51 Identities=8% Similarity=0.171 Sum_probs=43.8
Q ss_pred HHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 43 SMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 43 ~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
++....+..|+..|.. ++.|..+||+.+|+ .+..+.+.|+.|...|++...
T Consensus 16 ~l~d~~~~~IL~~L~~----~~~s~~eLA~~lgl----S~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 16 VMLEDTRRKILKLLRN----KEMTISQLSEILGK----TPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHSHHHHHHHHHHTT----CCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HhCCHHHHHHHHHHHc----CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 3344567788888874 48999999999999 999999999999999999864
No 424
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=89.98 E-value=0.2 Score=40.33 Aligned_cols=46 Identities=11% Similarity=0.293 Sum_probs=40.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|++.|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 11 ~~~~il~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 56 (162)
T 2p5v_A 11 TDIKILQVLQEN---GRLTNVELSERVAL----SPSPCLRRLKQLEDAGIVRQ 56 (162)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEee
Confidence 455688888875 58999999999999 99999999999999999985
No 425
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=89.86 E-value=0.22 Score=42.28 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=44.5
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.+..+||+.+++ ++..+.+.|+.|...|+|... ....+.+|+.++.+..
T Consensus 19 ~~~~~~~lA~~l~v----s~~tvs~~l~~Le~~GlV~r~------~~~~i~LT~~G~~~~~ 69 (214)
T 3hrs_A 19 NKITNKEIAQLMQV----SPPAVTEMMKKLLAEELLIKD------KKAGYLLTDLGLKLVS 69 (214)
T ss_dssp SCCCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE------TTTEEEECHHHHHHHH
T ss_pred CCcCHHHHHHHHCC----ChhHHHHHHHHHHHCCCEEEe------cCCCeEECHHHHHHHH
Confidence 58999999999999 999999999999999999875 3367889988886654
No 426
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=89.78 E-value=0.089 Score=43.49 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=50.4
Q ss_pred HHHHHHhChhHHHHhcCCCCCCCHHHHHHhCC-CCCCCCcccHHHHHHHHhcCccccccccC--CCCCCcceecChhchh
Q 017595 44 MQAAAELGVFEIIAKAGPGAKLSAAQIAAQMP-SRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLYSLAPVAKY 120 (369)
Q Consensus 44 l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~-~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y~~t~~~~~ 120 (369)
|.-=.++.|+..|.. ++.|+.+|++.++ + ....+.+.|+.|...|+|+...+. .+.....|++++.+..
T Consensus 20 La~P~Rl~il~~L~~----~~~~~~~l~~~l~~~----~~~~~s~Hl~~L~~aglv~~~~e~~~~g~~er~y~~~~~~~~ 91 (182)
T 4g6q_A 20 LHHPLRWRITQLLIG----RSLTTRELAELLPDV----ATTTLYRQVGILVKAGVLMVTAEHQVRGAVERTYTLNTQAGD 91 (182)
T ss_dssp TTSHHHHHHHHHTTT----SCEEHHHHHHHCTTB----CHHHHHHHHHHHHHHTSEEEEEEEEETTEEEEEEEECTTTTT
T ss_pred hCCHHHHHHHHHHHh----CCCCHHHHHHHhcCC----CHHHHHHHHHHHHHCCCeEEEEeecccCcceeEEEecccccc
Confidence 333467788888876 5899999999996 8 888999999999999999764321 0111246887765543
No 427
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.58 E-value=1.6 Score=39.19 Aligned_cols=89 Identities=12% Similarity=0.117 Sum_probs=55.4
Q ss_pred cceEEEEcCCh-h-HHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-CCCCCCEEEeccccccCChhHH
Q 017595 207 IKQLVDVGGGL-G-VTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-RIPKGDAILMKWILHNWDDEHC 282 (369)
Q Consensus 207 ~~~vLDvG~G~-G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~ 282 (369)
..+|.=||+|. | .++..+.+.....+++++|. +..++.+.+..-+.-...|..+ .....|+|+++- |....
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~~ 107 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTF 107 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGGH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHHH
Confidence 36899999884 3 45556666554347888898 6565554433222222333332 233459988763 44556
Q ss_pred HHHHHHHHHhCCCCCEEE
Q 017595 283 LTLLKNCYEAIPENGKII 300 (369)
Q Consensus 283 ~~~L~~~~~~L~pgG~ll 300 (369)
..+++++...|+||..++
T Consensus 108 ~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 108 REIAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHhhccCCCcEEE
Confidence 788999999999987544
No 428
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=89.55 E-value=0.18 Score=32.37 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=40.9
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
+..|++.|..+| |-+.++.+++.+|. +.+.+-..|+-|.+-|++..
T Consensus 12 e~~lL~yIr~sG--GildI~~~a~kygV----~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 12 ERELLDYIVNNG--GFLDIEHFSKVYGV----EKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp HHHHHHHHHHTT--SEEEHHHHHHHHCC----CHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHcC--CEEeHHHHHHHhCC----CHHHHHHHHHHHHHCCCeec
Confidence 445788998875 78999999999999 99999999999999999874
No 429
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=89.53 E-value=0.19 Score=39.96 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=40.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|++.|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 8 ~~~~il~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 53 (151)
T 2cyy_A 8 IDKKIIKILQND---GKAPLREISKITGL----AESTIHERIRKLRESGVIKK 53 (151)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHCS----CHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEE
Confidence 455788888875 58999999999999 99999999999999999975
No 430
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=89.53 E-value=0.14 Score=37.62 Aligned_cols=51 Identities=25% Similarity=0.274 Sum_probs=40.2
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|+..|-+. ++.|+.||++.++...+..+.-+.++|+-|+..|+|...
T Consensus 36 ~e~~VL~~L~~~---~~~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KGlV~R~ 86 (99)
T 2k4b_A 36 AELIVMRVIWSL---GEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTE 86 (99)
T ss_dssp SCSHHHHHHHHH---SCEEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHhcccCCCHhhHHHHHHHHHHCCCEEEE
Confidence 456678888764 489999999999751111578899999999999999875
No 431
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=89.41 E-value=0.45 Score=41.49 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=63.4
Q ss_pred CcceEEEEcCChhHHHHHHHHh-------CCCCeEEEcch----hHH----------------------------HH---
Q 017595 206 QIKQLVDVGGGLGVTLNIITSR-------YPHIEGVNFDL----PHV----------------------------IQ--- 243 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~-------~p~~~~~~~D~----~~~----------------------------~~--- 243 (369)
-++.|+|+|+-.|..+..++.. .++-+++++|. |.. ++
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 3479999999999887776542 46678888882 211 00
Q ss_pred hCCC----CCCceEEeCCCCCCC-------CCC--CEEEeccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 244 NAPS----YRGVKHIGGNMFERI-------PKG--DAILMKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 244 ~a~~----~~rv~~~~~d~~~~~-------p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
..+. .++|+++.|++.+.+ |.. |++++-.=. . +.....|+.+...|+|||.+++-|.
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y--~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y--EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H--HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c--chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 0111 268999999997632 322 777665532 2 4456789999999999998776554
No 432
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=89.32 E-value=0.24 Score=39.23 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=41.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 10 ~d~~il~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 55 (151)
T 2dbb_A 10 VDMQLVKILSEN---SRLTYRELADILNT----TRQRIARRIDKLKKLGIIRK 55 (151)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHTTS----CHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEE
Confidence 456788888875 58999999999999 99999999999999999975
No 433
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=89.28 E-value=0.43 Score=36.16 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=54.6
Q ss_pred HHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC------CCCCCCCcccHHHHHHHHhcCccccccccC--CCCCCccee
Q 017595 42 ASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM------PSRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLYS 113 (369)
Q Consensus 42 ~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~------~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y~ 113 (369)
++++-.+++-|+-.|.. +|.+.-+|++.+ ++ ++..+...|+-|...|+|...... .+.....|+
T Consensus 6 ~l~~g~l~~~IL~lL~~----~p~~Gyei~~~l~~~g~~~i----s~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~ 77 (117)
T 4esf_A 6 EMLKGSLEGCVLEIISR----RETYGYEITRHLNDLGFTEV----VEGTVYTILVRLEKKKLVNIEKKPSDMGPPRKFYS 77 (117)
T ss_dssp HHHHHHHHHHHHHHHHH----SCBCHHHHHHHHHHHTCTTC----CHHHHHHHHHHHHHTTCEEEEEEC-----CEEEEE
T ss_pred HHHHChHHHHHHHHHHc----CCCCHHHHHHHHHHcCCCCC----CccHHHHHHHHHHHCCCEEEEeecCCCCCCceEEE
Confidence 44555566667777876 489999999887 67 899999999999999999875321 122234699
Q ss_pred cChhchhhhc
Q 017595 114 LAPVAKYFVL 123 (369)
Q Consensus 114 ~t~~~~~~~~ 123 (369)
+|+.++..+.
T Consensus 78 LT~~G~~~l~ 87 (117)
T 4esf_A 78 LNEAGRQELE 87 (117)
T ss_dssp ECHHHHHHHH
T ss_pred ECHHHHHHHH
Confidence 9999986654
No 434
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=89.24 E-value=0.25 Score=40.29 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=41.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|+..|... ++.|..+||+++|+ .+..+.+.|+.|...|++..
T Consensus 28 ~d~~IL~~L~~~---~~~s~~eLA~~lgl----S~~tv~~rl~~L~~~G~I~~ 73 (171)
T 2e1c_A 28 IDKKIIKILQND---GKAPLREISKITGL----AESTIHERIRKLRESGVIKK 73 (171)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEe
Confidence 456788888875 58999999999999 99999999999999999975
No 435
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=89.20 E-value=0.22 Score=40.13 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=41.5
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|++.|.+. +++|..+||+++|+ .+..+.+-++.|...|++..
T Consensus 4 ~d~~il~~L~~~---~~~s~~~la~~lg~----s~~tv~~rl~~L~~~g~i~~ 49 (162)
T 3i4p_A 4 LDRKILRILQED---STLAVADLAKKVGL----STTPCWRRIQKMEEDGVIRR 49 (162)
T ss_dssp HHHHHHHHHTTC---SCSCHHHHHHHHTC----CHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHC---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeee
Confidence 456788999875 59999999999999 99999999999999999984
No 436
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=89.09 E-value=0.14 Score=35.95 Aligned_cols=51 Identities=18% Similarity=0.298 Sum_probs=39.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|++.|... ++.|+.+|++.++...+..+.-+.++|+.|+..|+|...
T Consensus 10 ~e~~vL~~L~~~---~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~ 60 (82)
T 1p6r_A 10 AELEVMKVIWKH---SSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHH 60 (82)
T ss_dssp HHHHHHHHHHTS---SSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcC---CCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEE
Confidence 456677888764 489999999998620001788999999999999999875
No 437
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=88.96 E-value=0.2 Score=39.62 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=42.7
Q ss_pred HhChhHHHHhcC--CCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 49 ELGVFEIIAKAG--PGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 49 ~lglfd~L~~~~--~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
++.++..|...+ .++++|..+||+.+++ ++..+.++++-|+..|+|....+.|+ ......+|+.+..++.
T Consensus 35 q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~----~~~tvsr~v~~Le~~glVr~~~~~Dr-R~~~v~LT~~G~~~~~ 106 (148)
T 4fx0_A 35 QFSTLAVISLSEGSAGIDLTMSELAARIGV----ERTTLTRNLEVMRRDGLVRVMAGADA-RCKRIELTAKGRAALQ 106 (148)
T ss_dssp HHHHHHHHHC---------CHHHHHHHHTC----CHHHHHHHHHHHHHTTSBC------------CCBCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHHHHCC----ChhhHHHHHHHHHHCCCEEeeCCCCC-CeeEEEECHHHHHHHH
Confidence 445566665432 1246899999999999 99999999999999999954321111 1234677777775553
No 438
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=88.95 E-value=0.22 Score=39.61 Aligned_cols=46 Identities=13% Similarity=0.202 Sum_probs=40.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 9 ~d~~il~~L~~~---~~~s~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 54 (152)
T 2cg4_A 9 LDRGILEALMGN---ARTAYAELAKQFGV----SPETIHVRVEKMKQAGIITG 54 (152)
T ss_dssp HHHHHHHHHHHC---TTSCHHHHHHHHTS----CHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHcCCcce
Confidence 355688888875 58999999999999 99999999999999999985
No 439
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=88.69 E-value=0.24 Score=38.74 Aligned_cols=45 Identities=16% Similarity=0.274 Sum_probs=39.7
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 6 ~~~il~~L~~~---~~~~~~ela~~lg~----s~~tv~~~l~~L~~~G~i~~ 50 (141)
T 1i1g_A 6 DKIILEILEKD---ARTPFTEIAKKLGI----SETAVRKRVKALEEKGIIEG 50 (141)
T ss_dssp HHHHHHHHHHC---TTCCHHHHHHHHTS----CHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEec
Confidence 45677888764 48999999999999 99999999999999999975
No 440
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=88.57 E-value=0.29 Score=42.60 Aligned_cols=71 Identities=13% Similarity=0.077 Sum_probs=52.1
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
.++.++..|...+ +++.|..+||+.+++ ++..+.++++-|...|+|.+...+.....-...+|+.+..++.
T Consensus 159 ~q~~vL~~L~~~~-~~~~t~~eLa~~l~i----~~~tvt~~v~rLe~~GlV~R~~~~~DrR~~~i~LT~~G~~~~~ 229 (250)
T 1p4x_A 159 VEFTILAIITSQN-KNIVLLKDLIETIHH----KYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAE 229 (250)
T ss_dssp HHHHHHHHHHTTT-TCCEEHHHHHHHSSS----CHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCcCHHHHHHHHCC----ChhhHHHHHHHHHHCCCEEeeCCCCCCCeEEEEECHHHHHHHH
Confidence 4566778887643 125999999999999 9999999999999999998754321111234677777776553
No 441
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=88.56 E-value=0.41 Score=37.78 Aligned_cols=62 Identities=10% Similarity=0.129 Sum_probs=47.2
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhC-----CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQM-----PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~-----~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
+-.+.-|++.|...+ ++.|+++|.+.+ ++ +..-+.|.|+.|+..|++.+...++ +..+|..+
T Consensus 21 T~qR~~Il~~L~~~~--~~~sa~ei~~~l~~~~~~i----s~aTVYR~L~~L~e~Glv~~~~~~~--~~~~Y~~~ 87 (145)
T 2fe3_A 21 TPQRHAILEYLVNSM--AHPTADDIYKALEGKFPNM----SVATVYNNLRVFRESGLVKELTYGD--ASSRFDFV 87 (145)
T ss_dssp CHHHHHHHHHHHHCS--SCCCHHHHHHHHGGGCTTC----CHHHHHHHHHHHHHTTSEEEECCTT--SCCEEEEC
T ss_pred CHHHHHHHHHHHhCC--CCCCHHHHHHHHHHhCCCC----ChhhHHHHHHHHHHCCCEEEEeeCC--CceEEECC
Confidence 345667899997642 589999999998 56 8889999999999999998753221 23467754
No 442
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=88.54 E-value=0.57 Score=35.39 Aligned_cols=75 Identities=13% Similarity=0.219 Sum_probs=54.9
Q ss_pred HHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC--------CCCCCCCcccHHHHHHHHhcCcccccccc--CCCCCCc
Q 017595 41 PASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM--------PSRNPNTGVMLDRILRLLVTNRVLRCSLS--SAGDNQR 110 (369)
Q Consensus 41 ~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~--------~~~~~~~~~~l~~~L~~L~~~g~l~~~~~--~~~~~~~ 110 (369)
.+.++-.+++-|+..|.. +|.+--+|++.+ ++ ++..+.+.|+-|...|+|..... +.+....
T Consensus 6 ~~~~~g~l~~~IL~~L~~----~~~~Gyei~~~l~~~~~~~~~i----~~gtly~~L~rLe~~GlI~~~~~~~~~~~~rk 77 (116)
T 3f8b_A 6 KEMLRAQTNVILLNVLKQ----GDNYVYGIIKQVKEASNGEMEL----NEATLYTIFKRLEKDGIISSYWGDESQGGRRK 77 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH----CCBCHHHHHHHHHHHTTTCCCC----CHHHHHHHHHHHHHTTSEEEEEEC----CCEE
T ss_pred HHHHhchHHHHHHHHHHh----CCCCHHHHHHHHHHHhCCCCCC----CcchHHHHHHHHHHCCCEEEEeeccCCCCCce
Confidence 345555667777888877 488999998876 56 88999999999999999986421 1122234
Q ss_pred ceecChhchhhhc
Q 017595 111 LYSLAPVAKYFVL 123 (369)
Q Consensus 111 ~y~~t~~~~~~~~ 123 (369)
.|++|+.++..+.
T Consensus 78 ~Y~LT~~G~~~l~ 90 (116)
T 3f8b_A 78 YYRLTEIGHENMR 90 (116)
T ss_dssp EEEECHHHHHHHH
T ss_pred EEEECHHHHHHHH
Confidence 6999999886654
No 443
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=88.53 E-value=0.29 Score=39.83 Aligned_cols=46 Identities=13% Similarity=0.289 Sum_probs=40.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRC 100 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~ 100 (369)
.+..|+..|... ++.|..+||+.+|+ .+..+.+.|+.|...|++..
T Consensus 18 ~d~~IL~~L~~~---~~~s~~eLA~~lgl----S~~tv~~~l~~L~~~G~I~~ 63 (171)
T 2ia0_A 18 LDRNILRLLKKD---ARLTISELSEQLKK----PESTIHFRIKKLQERGVIER 63 (171)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEe
Confidence 455678888875 58999999999999 99999999999999999974
No 444
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=88.19 E-value=0.27 Score=36.11 Aligned_cols=35 Identities=9% Similarity=0.186 Sum_probs=33.0
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
++.|..+||+.+|+ +..-+.+.|+.|...|++...
T Consensus 35 ~~~t~~ela~~l~i----s~~tv~~~l~~L~~~g~v~~~ 69 (109)
T 2d1h_A 35 KPITSEELADIFKL----SKTTVENSLKKLIELGLVVRT 69 (109)
T ss_dssp SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEee
Confidence 48999999999999 999999999999999999875
No 445
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=88.18 E-value=0.86 Score=40.17 Aligned_cols=97 Identities=9% Similarity=-0.069 Sum_probs=68.0
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCC----CCCceEEeCCCCCC----CC---CCCEEEecccc
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPS----YRGVKHIGGNMFER----IP---KGDAILMKWIL 274 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~~----~p---~~D~v~~~~vl 274 (369)
...+||+=+|+|.++.+++.. .-+++.+|. +...+..++ .++++++..|.+.. .| ..|+|++---.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 467899999999999999984 367888888 766655443 36799999997651 22 23999987765
Q ss_pred ccCChhHHHHHHHHHHH--hCCCCCEEEEEeccCC
Q 017595 275 HNWDDEHCLTLLKNCYE--AIPENGKIIIIDRMPM 307 (369)
Q Consensus 275 h~~~d~~~~~~L~~~~~--~L~pgG~lli~e~~~~ 307 (369)
..- .+..++++.+.+ .+.|+|.++|-=++..
T Consensus 170 e~k--~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 170 ERK--EEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CST--THHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCC--cHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 422 344556655555 3468898888766643
No 446
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=88.04 E-value=0.34 Score=37.49 Aligned_cols=61 Identities=8% Similarity=0.129 Sum_probs=47.4
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhC-----CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceec
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQM-----PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSL 114 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~-----~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~ 114 (369)
|-.+.-|++.|...+ ++.|++||.+.+ ++ +..-+.|.|+.|+..|++.+...++ +..+|..
T Consensus 10 T~qR~~Il~~l~~~~--~~~sa~ei~~~l~~~~~~i----s~~TVYR~L~~L~e~Glv~~~~~~~--~~~~y~~ 75 (131)
T 2o03_A 10 TRQRAAISTLLETLD--DFRSAQELHDELRRRGENI----GLTTVYRTLQSMASSGLVDTLHTDT--GESVYRR 75 (131)
T ss_dssp HHHHHHHHHHHHHCC--SCEEHHHHHHHHHHTTCCC----CHHHHHHHHHHHHTTTSEEEEECTT--SCEEEEE
T ss_pred CHHHHHHHHHHHhCC--CCCCHHHHHHHHHHhCCCC----CHhhHHHHHHHHHHCCCEEEEEeCC--CceEEEe
Confidence 556778899997642 589999999998 66 8889999999999999998753221 2346765
No 447
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=87.81 E-value=0.31 Score=36.96 Aligned_cols=74 Identities=12% Similarity=0.180 Sum_probs=55.1
Q ss_pred HHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCC------CCCCCCcccHHHHHHHHhcCcccccccc--CCCCCCccee
Q 017595 42 ASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMP------SRNPNTGVMLDRILRLLVTNRVLRCSLS--SAGDNQRLYS 113 (369)
Q Consensus 42 ~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~------~~~~~~~~~l~~~L~~L~~~g~l~~~~~--~~~~~~~~y~ 113 (369)
++++-.+++-|+..|.. +|.+.-+|++.++ + .+..+...|+-|...|+|..... +.+.....|+
T Consensus 9 ~l~~g~l~~~IL~lL~~----~p~~gyel~~~l~~~~~~~i----~~gtly~~L~~Le~~GlI~~~~~~~~~~~~rk~Y~ 80 (117)
T 3elk_A 9 RILHGLITLYILKELVK----RPMHGYELQKSMFETTGQAL----PQGSIYILLKTMKERGFVISESSVNEKGQQLTVYH 80 (117)
T ss_dssp HHHHHHHHHHHHHHHHH----SCEEHHHHHHHHHHHHSCCC----CTTHHHHHHHHHHHHTSEEEEEEEC-CCCEEEEEE
T ss_pred HHHhhHHHHHHHHHHHc----CCCCHHHHHHHHHHHhCCCC----CcchHHHHHHHHHHCCCEEEEeeecCCCCCceEEE
Confidence 45555667777888876 4899999998876 6 77899999999999999986432 1112234799
Q ss_pred cChhchhhhc
Q 017595 114 LAPVAKYFVL 123 (369)
Q Consensus 114 ~t~~~~~~~~ 123 (369)
+|+.++..+.
T Consensus 81 lT~~G~~~l~ 90 (117)
T 3elk_A 81 ITDAGKKFLC 90 (117)
T ss_dssp ECHHHHHHHH
T ss_pred ECHHHHHHHH
Confidence 9999986654
No 448
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=87.64 E-value=0.95 Score=31.08 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=32.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
+..|+.+||.++|+ ...-+.|.|.-|...|+|...
T Consensus 28 ~~~Ta~~IAkkLg~----sK~~vNr~LY~L~kkG~V~~~ 62 (75)
T 1sfu_A 28 DYTTAISLSNRLKI----NKKKINQQLYKLQKEDTVKMV 62 (75)
T ss_dssp CEECHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred cchHHHHHHHHHCC----CHHHHHHHHHHHHHCCCEecC
Confidence 45999999999999 889999999999999999875
No 449
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=87.07 E-value=0.42 Score=36.83 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=31.9
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..|.++||+.+++ ++.-+.+.|+.|...|+|...
T Consensus 51 ~ps~~~LA~~l~~----s~~~V~~~l~~Le~kGlI~~~ 84 (128)
T 2vn2_A 51 FPTPAELAERMTV----SAAECMEMVRRLLQKGMIAIE 84 (128)
T ss_dssp SCCHHHHHHTSSS----CHHHHHHHHHHHHHTTSSEEC
T ss_pred CCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 4799999999999 999999999999999999874
No 450
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=87.03 E-value=1.1 Score=33.90 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=54.8
Q ss_pred HHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhC------CCCCCCCcccHHHHHHHHhcCccccccccC--CCCCCcce
Q 017595 41 PASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQM------PSRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLY 112 (369)
Q Consensus 41 ~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~------~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y 112 (369)
.++++-.+++-|+..|.. +|.+--+|++.+ ++ ++..+...|+-|...|+|...... .+.....|
T Consensus 7 ~~l~~g~l~~~IL~lL~~----~p~~Gyei~~~l~~~g~~~i----s~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y 78 (116)
T 3hhh_A 7 TELLKGILEGLVLAIIQR----KETYGYEITKILNDQGFTEI----VEGTVYTILLRLEKNQWVIAEKKPSEKGPMRKFY 78 (116)
T ss_dssp HHHHTTHHHHHHHHHHHH----SCBCHHHHHHHHHTTSCSSC----CHHHHHHHHHHHHHTTSEEEEEEECC--CEEEEE
T ss_pred HHHHhhhHHHHHHHHHhc----CCCCHHHHHHHHHHcCCCCC----CccHHHHHHHHHHHCCCEEEEeeecCCCCCceEE
Confidence 344555566667777876 489999999887 56 889999999999999999864321 11223469
Q ss_pred ecChhchhhhc
Q 017595 113 SLAPVAKYFVL 123 (369)
Q Consensus 113 ~~t~~~~~~~~ 123 (369)
++|+.++..+.
T Consensus 79 ~lT~~G~~~l~ 89 (116)
T 3hhh_A 79 RLTSSGEAELA 89 (116)
T ss_dssp EECHHHHHHHH
T ss_pred EECHHHHHHHH
Confidence 99999986654
No 451
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=86.93 E-value=0.82 Score=29.27 Aligned_cols=45 Identities=22% Similarity=0.224 Sum_probs=37.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVA 118 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~ 118 (369)
.++|+.|+|+.+++ .-...+.-|+.|-+.|-+.+- ..+|++.|--
T Consensus 17 QGMTaGEVAA~f~w----~Le~ar~aLeqLf~~G~LRKR-------sSRYrlkphl 61 (68)
T 3i71_A 17 QGMTAGEVAAHFGW----PLEKARNALEQLFSAGTLRKR-------SSRYRLKPHL 61 (68)
T ss_dssp TCBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE-------CCEEEECC--
T ss_pred ccccHHHHHHHhCC----cHHHHHHHHHHHHhcchhhhh-------ccccccCcch
Confidence 48999999999999 888888899999999999873 5788887643
No 452
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=86.42 E-value=0.46 Score=39.56 Aligned_cols=35 Identities=17% Similarity=-0.067 Sum_probs=32.1
Q ss_pred CCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 63 AKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 63 ~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.|.|..|||+.+|+ ....+.+.|+.|...|++...
T Consensus 23 ~~~s~~eia~~lgl----~~~tv~~~l~~Le~~G~i~~~ 57 (196)
T 3k2z_A 23 YPPSVREIARRFRI----TPRGALLHLIALEKKGYIERK 57 (196)
T ss_dssp SCCCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEECC
T ss_pred CCCCHHHHHHHcCC----CcHHHHHHHHHHHHCCCEEec
Confidence 38999999999999 777899999999999999864
No 453
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=86.25 E-value=0.34 Score=37.84 Aligned_cols=46 Identities=15% Similarity=0.136 Sum_probs=38.0
Q ss_pred hChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 50 LGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 50 lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..++..|.... ++.|+.+||+.+|+ ++..+.++|+.|...|+|...
T Consensus 29 ~~il~~L~~~~--~~~t~~ela~~l~~----~~stvs~~l~~L~~~G~v~r~ 74 (152)
T 1ku9_A 29 GAVYAILYLSD--KPLTISDIMEELKI----SKGNVSMSLKKLEELGFVRKV 74 (152)
T ss_dssp HHHHHHHHHCS--SCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcC--CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 34566664211 48999999999999 999999999999999999874
No 454
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=86.11 E-value=0.33 Score=38.40 Aligned_cols=72 Identities=10% Similarity=0.194 Sum_probs=51.7
Q ss_pred HHHHHHhChhHHHHhcCCCCCCCHHHHHHhC--------CCCCCCCcccHHHHHHHHhcCccccccccC--CCCCCccee
Q 017595 44 MQAAAELGVFEIIAKAGPGAKLSAAQIAAQM--------PSRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLYS 113 (369)
Q Consensus 44 l~~a~~lglfd~L~~~~~~~~~t~~~La~~~--------~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y~ 113 (369)
+.--.++-|+..|.. +|.+.-+|++.+ ++ .+..+.+.|+-|...|+|...... .+.....|.
T Consensus 38 ~~g~~~~~IL~~L~~----~~~~gyeI~~~l~~~~~~~~~i----s~gtLy~~L~rLE~~GlI~~~~~~~~~~~~rk~Y~ 109 (145)
T 1xma_A 38 IRGYVDTIILSLLIE----GDSYGYEISKNIRIKTDELYVI----KETTLYSAFARLEKNGYIKSYYGEETQGKRRTYYR 109 (145)
T ss_dssp GGGTHHHHHHHHHHH----CCEEHHHHHHHHHHHHTTSCCC----CHHHHHHHHHHHHHTTSEEEEEEEEC--CEEEEEE
T ss_pred hcCcHHHHHHHHHHh----CCCCHHHHHHHHHHhhCCccCc----ChhHHHHHHHHHHHCCCEEEEEeccCCCCCeEEEE
Confidence 333456667777766 488988888877 57 899999999999999999764221 111234699
Q ss_pred cChhchhhhc
Q 017595 114 LAPVAKYFVL 123 (369)
Q Consensus 114 ~t~~~~~~~~ 123 (369)
+|+.++.++.
T Consensus 110 LT~~G~~~l~ 119 (145)
T 1xma_A 110 ITPEGIKYYK 119 (145)
T ss_dssp ECHHHHHHHH
T ss_pred ECHHHHHHHH
Confidence 9998886653
No 455
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=85.84 E-value=0.48 Score=45.33 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=50.6
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
++.++..|.+.+ ++++|..+||+.+++ ++..+.|+|+-|+..|+|.+...+..+..-...+|+.++.++
T Consensus 406 q~~vl~~l~~~~-~~~~~~~~l~~~~~~----~~~~~t~~~~~le~~g~v~r~~~~~D~R~~~i~lT~~g~~~~ 474 (487)
T 1hsj_A 406 EIYILNHILRSE-SNEISSKEIAKCSEF----KPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANI 474 (487)
T ss_dssp HHHHHHHHHTCS-CSEEEHHHHHHSSCC----CHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHHH
T ss_pred HHHHHHHHHhCC-CCCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEeecCCCCCCCeEEEEECHHHHHHH
Confidence 566777887641 248999999999999 999999999999999999875322111123466777666544
No 456
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.75 E-value=3.5 Score=38.08 Aligned_cols=59 Identities=12% Similarity=0.226 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHhhhhHhHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHh-------CCCCeEEEcchh
Q 017595 176 SRFNGVFNKAMLNHTSIVMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSR-------YPHIEGVNFDLP 239 (369)
Q Consensus 176 ~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-------~p~~~~~~~D~~ 239 (369)
|+....|.+.+..+.. .+..... .+..-+|+|+|+|+|.++..+++. +..+++..++.+
T Consensus 55 peis~~FGe~la~~~~----~~w~~~g-~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~S 120 (387)
T 1zkd_A 55 PEISQMFGELLGLWSA----SVWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEIN 120 (387)
T ss_dssp HHHCHHHHHHHHHHHH----HHHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCC
T ss_pred CchHHHHHHHHHHHHH----HHHHHcC-CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecC
Confidence 4555566665544322 2222233 345678999999999999988765 234688888883
No 457
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=85.39 E-value=0.66 Score=36.27 Aligned_cols=67 Identities=10% Similarity=0.101 Sum_probs=48.1
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhCCCC-CCCCcccHHHHHHHHhcCccccccccCCCCCCcceecCh
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQMPSR-NPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAP 116 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~-~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~ 116 (369)
+..+.-|++.|...+ ++.|+++|.+.+.-. +..+..-+.|.|+.|+..|++.+...++ +..+|....
T Consensus 13 T~qR~~Il~~L~~~~--~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~--g~~~Y~~~~ 80 (139)
T 3mwm_A 13 TRQRAAVSAALQEVE--EFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAE--GESVYRRCS 80 (139)
T ss_dssp HHHHHHHHHHHTTCS--SCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSEEEECTT--SCEEEECCS
T ss_pred CHHHHHHHHHHHhCC--CCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEEEEcCC--CceEEEECC
Confidence 456778899997753 589999999887310 1117889999999999999998753221 235787654
No 458
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=85.00 E-value=0.46 Score=35.35 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=50.9
Q ss_pred HHHHHhChhHHHHhcCCCCCCCHHHHHHh----CCCCCCCCcccHHHHHHHHhcCccccccccC-CCCCCcceecChhch
Q 017595 45 QAAAELGVFEIIAKAGPGAKLSAAQIAAQ----MPSRNPNTGVMLDRILRLLVTNRVLRCSLSS-AGDNQRLYSLAPVAK 119 (369)
Q Consensus 45 ~~a~~lglfd~L~~~~~~~~~t~~~La~~----~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~-~~~~~~~y~~t~~~~ 119 (369)
+-.+++-|+..|.. +|.+.-+|++. +++ ++..+.+.|+-|...|+|.....+ ++.....|++|+.++
T Consensus 7 ~g~l~~~IL~~L~~----~~~~gyel~~~l~~~~~i----~~~tly~~L~~Le~~GlI~~~~~~~~~r~r~~y~LT~~G~ 78 (108)
T 3l7w_A 7 ALLIEYLILAIVSK----HDSYGYDISQTIKLIASI----KESTLYPILKKLEKAGYLSTYTQEHQGRRRKYYHLTDSGE 78 (108)
T ss_dssp HHHHHHHHHHHHHH----SCEEHHHHHHHHTTTCCC----CHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHHc----CCCcHHHHHHHHHHHhCC----CcChHHHHHHHHHHCCCeEEEeecCCCCcceEEEECHHHH
Confidence 33456667777876 37887777776 477 899999999999999999874321 111123589999988
Q ss_pred hhhc
Q 017595 120 YFVL 123 (369)
Q Consensus 120 ~~~~ 123 (369)
..+.
T Consensus 79 ~~l~ 82 (108)
T 3l7w_A 79 KHLV 82 (108)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 459
>3cta_A Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728} SCOP: a.4.5.28 b.43.5.2
Probab=84.86 E-value=0.45 Score=40.70 Aligned_cols=53 Identities=11% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
+.|+.++|+.+++ .+..+++.++.|...|+|.+...+ ....+.+|+.+..+..
T Consensus 27 ~~s~s~aA~~L~i----sq~avSr~I~~LE~~~L~~R~~~~---R~~~v~LT~~G~~l~~ 79 (230)
T 3cta_A 27 YLTSSKLADMLGI----SQQSASRIIIDLEKNGYITRTVTK---RGQILNITEKGLDVLY 79 (230)
T ss_dssp ECCHHHHHHHHTS----CHHHHHHHHHHHHHTTSEEEEEET---TEEEEEECHHHHHHHH
T ss_pred CcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEEEcC---CeEEEEECHHHHHHHH
Confidence 6899999999999 999999999999999999874110 1456888888887664
No 460
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=84.13 E-value=0.97 Score=37.23 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=45.1
Q ss_pred HHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcc-ccccccCCCCCCcceecChh
Q 017595 47 AAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRV-LRCSLSSAGDNQRLYSLAPV 117 (369)
Q Consensus 47 a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~-l~~~~~~~~~~~~~y~~t~~ 117 (369)
-....|++.|...+ ++.|+.+||+.+|+ ..+-+.|-|+.|...|+ +... .+.|.+...
T Consensus 21 ~R~~~Il~~L~~~~--~~~s~~eLa~~l~v----S~~Ti~rdi~~L~~~G~~I~~~-------~~Gy~l~~~ 79 (187)
T 1j5y_A 21 ERLKSIVRILERSK--EPVSGAQLAEELSV----SRQVIVQDIAYLRSLGYNIVAT-------PRGYVLAGG 79 (187)
T ss_dssp HHHHHHHHHHHHCS--SCBCHHHHHHHHTS----CHHHHHHHHHHHHHHTCCCEEE-------TTEEECCTT
T ss_pred HHHHHHHHHHHHcC--CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCeEEEE-------CCEEEECCc
Confidence 34566888887632 37999999999999 99999999999999999 6542 345666643
No 461
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=83.98 E-value=1.2 Score=38.73 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=36.9
Q ss_pred hHHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcch-hHHHHhCC
Q 017595 193 VMNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAP 246 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 246 (369)
.++.++..+. .....|||..||+|.++.+..+. +.+++++|+ +..++.++
T Consensus 201 l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 201 LIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 3455555442 45679999999999999998776 468899998 66665543
No 462
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=83.49 E-value=0.94 Score=37.03 Aligned_cols=65 Identities=11% Similarity=0.271 Sum_probs=47.9
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhC--------CCCCCCCcccHHHHHHHHhcCccccccccC--CCCCCcceecChh
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQM--------PSRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLYSLAPV 117 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~--------~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y~~t~~ 117 (369)
+++-|+..|.. +|.+.-+|++.+ ++ ++..+.+.|+-|...|+|.....+ ++.....|++|+.
T Consensus 3 l~~~iL~lL~~----~~~~gyel~~~l~~~~~~~~~~----s~~~ly~~L~~Le~~GlI~~~~~~~~~~~~r~~Y~lT~~ 74 (179)
T 1yg2_A 3 LPHVILTVLST----RDATGYDITKEFSASIGYFWKA----SHQQVYRELNKMGEQGLVTCVLEPQEGKPDRKVYSITQA 74 (179)
T ss_dssp HHHHHHHHHHH----CCBCHHHHHHHHTTGGGGTCCC----CHHHHHHHHHHHHHTTSEEECCC---------CEEECHH
T ss_pred hHHHHHHHHhc----CCCCHHHHHHHHHHHhCCccCC----CcCcHHHHHHHHHHCCCeEEEeecCCCCCCceEEEeChH
Confidence 45567777876 489999999988 46 889999999999999999864221 1112357999999
Q ss_pred chh
Q 017595 118 AKY 120 (369)
Q Consensus 118 ~~~ 120 (369)
++.
T Consensus 75 G~~ 77 (179)
T 1yg2_A 75 GRS 77 (179)
T ss_dssp HHH
T ss_pred HHH
Confidence 884
No 463
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=83.43 E-value=0.72 Score=33.77 Aligned_cols=35 Identities=26% Similarity=0.326 Sum_probs=31.9
Q ss_pred CCC-CHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 63 AKL-SAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 63 ~~~-t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..+ |..+||+.+|+ ...-+++.|+.|...|++...
T Consensus 33 ~~lps~~eLa~~~~v----Sr~tvr~al~~L~~~Gli~~~ 68 (102)
T 1v4r_A 33 DTLPSVADIRAQFGV----AAKTVSRALAVLKSEGLVSSR 68 (102)
T ss_dssp SBCCCHHHHHHHSSS----CTTHHHHHTTTTTTSSCCEEE
T ss_pred CCCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEe
Confidence 355 99999999999 999999999999999999864
No 464
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=83.40 E-value=0.63 Score=43.08 Aligned_cols=72 Identities=15% Similarity=0.285 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccC---CCCCCcceecCh
Q 017595 40 LPASMQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSS---AGDNQRLYSLAP 116 (369)
Q Consensus 40 ~~~~l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~---~~~~~~~y~~t~ 116 (369)
...+++..-+..|++.|. . +++|..|||+.+|+ .+.-+.++++-|...|++.+.... .|+....|++++
T Consensus 13 ~~~~~~~~~~~~il~~l~-~---~~~sr~~la~~~gl----s~~tv~~~v~~L~~~gli~~~~~~~~~~GR~~~~l~~~~ 84 (380)
T 2hoe_A 13 MPKSVRAENISRILKRIM-K---SPVSRVELAEELGL----TKTTVGEIAKIFLEKGIVVEEKDSPKGVGRPTKSLKISP 84 (380)
T ss_dssp ---------CCCSHHHHH-H---SCBCHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEEEECCC----CCCEEEEECG
T ss_pred CchhHHHHHHHHHHHHHH-c---CCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEeecCCCCCCCCCceEEEEcc
Confidence 345666677778999999 6 49999999999999 999999999999999999875321 122234577777
Q ss_pred hch
Q 017595 117 VAK 119 (369)
Q Consensus 117 ~~~ 119 (369)
...
T Consensus 85 ~~~ 87 (380)
T 2hoe_A 85 NCA 87 (380)
T ss_dssp GGC
T ss_pred CCC
Confidence 654
No 465
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=83.21 E-value=0.96 Score=35.85 Aligned_cols=62 Identities=21% Similarity=0.326 Sum_probs=47.8
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhC-----CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQM-----PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~-----~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
+..+.-|++.|...+ ++.|+++|.+.+ ++ +..-+.|.|+.|+..|++.+...++ +..+|..+
T Consensus 26 T~qR~~IL~~l~~~~--~~~sa~ei~~~l~~~~~~i----s~aTVYR~L~~L~e~Glv~~~~~~~--~~~~Y~~~ 92 (150)
T 2xig_A 26 SKQREEVVSVLYRSG--THLSPEEITHSIRQKDKNT----SISSVYRILNFLEKENFISVLETSK--SGRRYEIA 92 (150)
T ss_dssp HHHHHHHHHHHHHCS--SCBCHHHHHHHHHHHSTTC----CHHHHHHHHHHHHHTTSEEEEEETT--TEEEEEES
T ss_pred CHHHHHHHHHHHhCC--CCCCHHHHHHHHHHhCCCC----CHhhHHHHHHHHHHCCcEEEEEeCC--CceEEEec
Confidence 566778899997753 589999999987 56 8889999999999999998753221 23467654
No 466
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=82.97 E-value=0.86 Score=35.41 Aligned_cols=63 Identities=11% Similarity=0.183 Sum_probs=46.5
Q ss_pred HHHHhChhHHHHhcCCCCCCCHHHHHHhC-----CCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 46 AAAELGVFEIIAKAGPGAKLSAAQIAAQM-----PSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 46 ~a~~lglfd~L~~~~~~~~~t~~~La~~~-----~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
+-.+.-|++.|...+ +++.|++||.+.+ ++ +..-+.|.|+.|+..|++.+...++ +..+|..+
T Consensus 17 T~qR~~Il~~L~~~~-~~~~sa~ei~~~l~~~~~~i----s~aTVYR~L~~L~e~Glv~~~~~~~--~~~~Y~~~ 84 (136)
T 1mzb_A 17 TLPRVKILQMLDSAE-QRHMSAEDVYKALMEAGEDV----GLATVYRVLTQFEAAGLVVRHNFDG--GHAVFELA 84 (136)
T ss_dssp CHHHHHHHHHHHCC--CCSBCHHHHHHHHHHTTCCC----CHHHHHHHHHHHHHHTSEEEECSSS--SSCEEEES
T ss_pred CHHHHHHHHHHHhCC-CCCCCHHHHHHHHHhhCCCC----CHHHHHHHHHHHHHCCcEEEEEeCC--CceEEEeC
Confidence 345667889987631 1489999999998 56 8889999999999999998753211 23568754
No 467
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=82.71 E-value=2.5 Score=38.45 Aligned_cols=123 Identities=10% Similarity=0.084 Sum_probs=72.1
Q ss_pred cceEEEEcCChhHHHHHHHHhCCCC-eEEEcch-hHHHHhCCC-CCCceEEeCCCCCC----CC--CCCEEEeccccccC
Q 017595 207 IKQLVDVGGGLGVTLNIITSRYPHI-EGVNFDL-PHVIQNAPS-YRGVKHIGGNMFER----IP--KGDAILMKWILHNW 277 (369)
Q Consensus 207 ~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~----~p--~~D~v~~~~vlh~~ 277 (369)
..+++|+-||.|.+...+....-+. .+..+|. +..++..+. .+...++.+|+.+- ++ ..|+++...--..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 4689999999999999999885333 3566777 655554433 35566788888762 23 24999887664444
Q ss_pred Chh-------H-HHHHHHHHH---HhCC--CCCEEEEEeccCCCCCcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHH
Q 017595 278 DDE-------H-CLTLLKNCY---EAIP--ENGKIIIIDRMPMVTPEATAAAREASMTDIIMLMQFSGGRERTTQEFMAL 344 (369)
Q Consensus 278 ~d~-------~-~~~~L~~~~---~~L~--pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~l 344 (369)
+-. + .-.++.++. +.++ | ++++.|.+..-. ++ .+.+.+.+.
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ENV~~l~----------------------~~--~~~~~i~~~ 135 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLP--KYILLENVKGFE----------------------VS--STRDLLIQT 135 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCC--SEEEEEEETTGG----------------------GS--HHHHHHHHH
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCC--CEEEEeCCcccc----------------------CH--HHHHHHHHH
Confidence 321 1 112344333 4445 5 466777764210 01 124567788
Q ss_pred HHHcCCcceeE
Q 017595 345 ANEAGFNGVNY 355 (369)
Q Consensus 345 l~~aGf~~~~~ 355 (369)
|++.||.+...
T Consensus 136 l~~~GY~v~~~ 146 (343)
T 1g55_A 136 IENCGFQYQEF 146 (343)
T ss_dssp HHHTTEEEEEE
T ss_pred HHHCCCeeEEE
Confidence 88899886543
No 468
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=82.49 E-value=0.33 Score=36.77 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=38.6
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCC----CCCCCCcccHHHHHHHHhcCcccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMP----SRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~----~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
++.|+..|... ++.|..+||+.++ + .+.-+.++|+-|+..|+|...
T Consensus 12 ~~~vL~~l~~~---~~~t~~ela~~l~~~~~~----s~~tv~~~l~~L~~~Glv~r~ 61 (123)
T 1okr_A 12 EWEVMNIIWMK---KYASANNIIEEIQMQKDW----SPKTIRTLITRLYKKGFIDRK 61 (123)
T ss_dssp HHHHHHHHHHH---SSEEHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhC---CCcCHHHHHHHHhccCCC----cHhhHHHHHHHHHHCCCeEEE
Confidence 45566667654 4899999999998 6 789999999999999999875
No 469
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=82.39 E-value=0.75 Score=39.32 Aligned_cols=48 Identities=17% Similarity=0.320 Sum_probs=40.5
Q ss_pred CHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 66 SAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 66 t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
+..+||+.+++ ++..+.+.|+.|...|++... ....+.+|+.+..+..
T Consensus 26 ~~~~La~~l~v----s~~tvs~~l~~Le~~GlV~r~------~~~~v~LT~~G~~~~~ 73 (230)
T 1fx7_A 26 LRARIAERLDQ----SGPTVSQTVSRMERDGLLRVA------GDRHLELTEKGRALAI 73 (230)
T ss_dssp CHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEC------TTSCEEECHHHHHHHH
T ss_pred cHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEe------CCccEEECHHHHHHHH
Confidence 44999999999 999999999999999999974 2357888888876553
No 470
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=82.06 E-value=5 Score=35.27 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=48.3
Q ss_pred CcceEEEEcCChhHHHHHHHHhCCC----CeEEEcchhHHHHhCCCCCCceEEeCCCCCCCCCCCEEEeccccccCChhH
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRYPH----IEGVNFDLPHVIQNAPSYRGVKHIGGNMFERIPKGDAILMKWILHNWDDEH 281 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~p~----~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~ 281 (369)
+...|+-||||.|.....|.+.+|+ ++.+.+|...-.......+ ++.+.... + ++.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~----------------NV~li~~f---v-de~ 119 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLR----------------DVTLVTRF---V-DEE 119 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCT----------------TEEEEECC---C-CHH
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCC----------------cEEEEecc---C-CHH
Confidence 4569999999999999999988775 5777777411111111111 44444332 2 233
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeccCC
Q 017595 282 CLTLLKNCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 282 ~~~~L~~~~~~L~pgG~lli~e~~~~ 307 (369)
. +++.++.+....+|+|.|.-..
T Consensus 120 d---l~~l~~~~~~~~iLLISDIRS~ 142 (307)
T 3mag_A 120 Y---LRSIKKQLHPSKIILISDVRSK 142 (307)
T ss_dssp H---HHHHHHHHTTSCEEEEECCCC-
T ss_pred H---HHHHHHhccCCCEEEEEEecCC
Confidence 2 4555556667788998887654
No 471
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=81.43 E-value=1.3 Score=35.04 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=62.6
Q ss_pred HHHHHHhccCcCCcceEEEEcCChhHHHHHHHHhCCCCeEEEcchhHHHHhCCCCCCceEEeCCCCCCCCC-----C-CE
Q 017595 194 MNRILDSYNGFEQIKQLVDVGGGLGVTLNIITSRYPHIEGVNFDLPHVIQNAPSYRGVKHIGGNMFERIPK-----G-DA 267 (369)
Q Consensus 194 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~~p~-----~-D~ 267 (369)
.....+... .-..-|||+|=|+|..=-++.+.+|+-+++++|..-.+--...-+.=.++-||+.+..|. + .+
T Consensus 30 L~~a~~~v~--~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 30 LEHAIAQTA--GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp HHHHHHHTT--TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred HHHHHHHhc--CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCce
Confidence 334444443 234689999999999999999999999999999621100000012346777877663221 2 23
Q ss_pred EEeccccccCChhHHH----HHHHHHHHhCCCCCEEEEEecc
Q 017595 268 ILMKWILHNWDDEHCL----TLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 268 v~~~~vlh~~~d~~~~----~~L~~~~~~L~pgG~lli~e~~ 305 (369)
.+...=|-...+++-. .+=.-+..+|.|||.++.-.+.
T Consensus 108 ~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 108 SLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred EEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 3222222212222222 2333455677889977765554
No 472
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=81.23 E-value=17 Score=28.19 Aligned_cols=92 Identities=16% Similarity=0.095 Sum_probs=54.0
Q ss_pred CCcceEEEEcCCh-hHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-C------CCCCCEEEeccccc
Q 017595 205 EQIKQLVDVGGGL-GVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-R------IPKGDAILMKWILH 275 (369)
Q Consensus 205 ~~~~~vLDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~------~p~~D~v~~~~vlh 275 (369)
....+|+=+|+|. |......+... +.+++++|. +..++.++...++.++.+|..+ + ....|+|+..-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~--- 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT--- 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS---
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe---
Confidence 3557899999874 55544444443 357888887 6666665523356677777654 1 12238877653
Q ss_pred cCChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 276 NWDDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 276 ~~~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
+++.....+..+.+.+.|..+++..
T Consensus 93 --~~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 93 --NDDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp --SCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred --CCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 2233344455566666666665553
No 473
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=81.18 E-value=0.74 Score=35.84 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=32.1
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..|.++||+++|+ ++.-+.+.|.-|...|++...
T Consensus 51 ~ps~~~LA~~~~~----s~~~v~~~L~~L~~KGlI~i~ 84 (135)
T 2v79_A 51 FPTPNQLQEGMSI----SVEECTNRLRMFIQKGFLFIE 84 (135)
T ss_dssp SCCHHHHHTTSSS----CHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 6799999999999 999999999999999999873
No 474
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=81.00 E-value=2 Score=40.14 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=39.5
Q ss_pred CCcceEEEEcCChhHHHHHHH-HhCCC-CeEEEcch-hHHHHhCCC---------C-CCceEEeCCC
Q 017595 205 EQIKQLVDVGGGLGVTLNIIT-SRYPH-IEGVNFDL-PHVIQNAPS---------Y-RGVKHIGGNM 258 (369)
Q Consensus 205 ~~~~~vLDvG~G~G~~~~~l~-~~~p~-~~~~~~D~-~~~~~~a~~---------~-~rv~~~~~d~ 258 (369)
++...++|||++.|.++..++ +.+++ .+++.++. |...+..++ . ++++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 566899999999999999988 56765 78999998 766553321 2 5666665443
No 475
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=79.73 E-value=0.86 Score=35.44 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=40.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCC----CCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMP----SRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~----~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|+..|.... ++.|..+|++.++ + ++.-+.++|+-|+..|+|...
T Consensus 10 ~e~~vL~~L~~~~--~~~t~~el~~~l~~~~~~----~~~Tvt~~l~rLe~kGlv~r~ 61 (138)
T 2g9w_A 10 LERAVMDHLWSRT--EPQTVRQVHEALSARRDL----AYTTVMAVLQRLAKKNLVLQI 61 (138)
T ss_dssp HHHHHHHHHHTCS--SCEEHHHHHHHHTTTCCC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHhcC--CCCCHHHHHHHHhccCCC----CHHHHHHHHHHHHHCCCEEEE
Confidence 4667778887621 4899999999997 6 888999999999999999875
No 476
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=79.59 E-value=1.1 Score=41.70 Aligned_cols=67 Identities=9% Similarity=0.113 Sum_probs=47.3
Q ss_pred HHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccC----CCCCCcceecChhc
Q 017595 45 QAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSS----AGDNQRLYSLAPVA 118 (369)
Q Consensus 45 ~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~----~~~~~~~y~~t~~~ 118 (369)
+..-+..|++.|... +++|..|||+.+++ .+.-+.++++.|...|++.+.... .|+....|+.++..
T Consensus 14 r~~n~~~il~~l~~~---~~~sr~~la~~~~l----s~~tv~~~v~~L~~~g~i~~~~~~~~~~~GR~~~~l~~~~~~ 84 (406)
T 1z6r_A 14 KQTNAGAVYRLIDQL---GPVSRIDLSRLAQL----APASITKIVHEMLEAHLVQELEIKEAGNRGRPAVGLVVETEA 84 (406)
T ss_dssp HHHHHHHHHHHHHSS---CSCCHHHHHHHTTC----CHHHHHHHHHHHHHHTSEEEC-------------CEEECCTT
T ss_pred HHhHHHHHHHHHHHc---CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCcEEeecccCCCCCCCCCeEEEEcCCc
Confidence 333444578888875 59999999999999 999999999999999999874221 12222346666654
No 477
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.99 E-value=9.2 Score=33.19 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=50.6
Q ss_pred ceEEEEcCCh-hH-HHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCCCC-CCCEEEeccccccCChhHHH
Q 017595 208 KQLVDVGGGL-GV-TLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFERIP-KGDAILMKWILHNWDDEHCL 283 (369)
Q Consensus 208 ~~vLDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~~~~ 283 (369)
.+|.=||+|. |. ++..+.+.....++++.|. +...+.+.+..-......|..+... ..|+|+++- +.....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 76 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTFR 76 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS-----CHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcC-----CHHHHH
Confidence 3677789884 33 3444444332347888887 5555443322111111223322233 459888653 445566
Q ss_pred HHHHHHHHhCCCCCEEEE
Q 017595 284 TLLKNCYEAIPENGKIII 301 (369)
Q Consensus 284 ~~L~~~~~~L~pgG~lli 301 (369)
.+++++...++|+..++.
T Consensus 77 ~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 77 EIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHhhCCCCcEEEE
Confidence 888889889999875443
No 478
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=78.81 E-value=0.75 Score=34.88 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=40.3
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.++.|+..|... +|.|..+|++.++...+.++.-+.++|+-|+..|+|...
T Consensus 11 ~q~~vL~~L~~~---~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~R~ 61 (126)
T 1sd4_A 11 AEWDVMNIIWDK---KSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRY 61 (126)
T ss_dssp HHHHHHHHHHHS---SSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHhc---CCCCHHHHHHHHhhcCCCChhhHHHHHHHHHHCCceEEE
Confidence 456677788775 489999999998631111788999999999999999875
No 479
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=78.18 E-value=1.7 Score=37.60 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=51.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
-++.++..|.+.+ .++.|..+||+.+++ ++.-+.++|+-|...|+|.+...+.....-...+|+.+..+..
T Consensus 35 ~q~~vL~~L~~~~-~~~~~~~el~~~l~~----~~~t~t~~l~rLe~~G~i~R~~~~~DrR~~~i~LT~~G~~~~~ 105 (250)
T 1p4x_A 35 KEFILLTYLFHQQ-ENTLPFKKIVSDLCY----KQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIA 105 (250)
T ss_dssp HHHHHHHHHHSCS-CSEEEHHHHHHHSSS----CGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CCCcCHHHHHHHHCC----CHhhHHHHHHHHHHCCCEEecCCCCCCCeEEEEECHHHHHHHH
Confidence 3556777776531 137999999999999 9999999999999999998753221111124667887776543
No 480
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=78.11 E-value=2.3 Score=42.45 Aligned_cols=22 Identities=14% Similarity=0.219 Sum_probs=17.2
Q ss_pred CcceEEEEcCChhHHHHHHHHh
Q 017595 206 QIKQLVDVGGGLGVTLNIITSR 227 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~ 227 (369)
..-+|+|+|-|+|......++.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~ 87 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQA 87 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHH
T ss_pred CceEEEEeCCchHHHHHHHHHH
Confidence 4469999999999876665554
No 481
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=77.91 E-value=3.2 Score=27.77 Aligned_cols=46 Identities=15% Similarity=0.202 Sum_probs=39.4
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCccc-HHHHHHHHhcCcccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVM-LDRILRLLVTNRVLRCS 101 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~-l~~~L~~L~~~g~l~~~ 101 (369)
+-.|++.|... ||-++-.||+.+|+ .... +-+.|..|...|+|..+
T Consensus 12 ee~I~~fL~~~---Gp~~AL~IAK~LGl----ktAK~VNp~LY~m~~~~lL~~D 58 (72)
T 3eyi_A 12 EEDIYRFLKDN---GPQRALVIAQALGM----RTAKDVNRDLYRMKSRHLLDMD 58 (72)
T ss_dssp HHHHHHHHHHH---CSEEHHHHHHHTTC----CSGGGTHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHHHc---CCchHHHHHHHhCc----chhhhcCHHHHHHHHccCcCCC
Confidence 45688999887 59999999999999 4444 88999999999999775
No 482
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=77.85 E-value=1.7 Score=36.89 Aligned_cols=50 Identities=12% Similarity=0.266 Sum_probs=41.9
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
+.+..+||+.+++ .+..+.+.|+-|...|++.+. ....+.+|+.++.+..
T Consensus 24 ~~~~~~la~~l~v----s~~tvs~~l~~Le~~GlV~r~------~~~~v~LT~~G~~~~~ 73 (226)
T 2qq9_A 24 TPLRARIAERLEQ----SGPTVSQTVARMERDGLVVVA------SDRSLQMTPTGRTLAT 73 (226)
T ss_dssp CCBHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEC------TTSBEEECHHHHHHHH
T ss_pred CccHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEEe------CCCCeEECHHHHHHHH
Confidence 3456999999999 999999999999999999874 3467899998876553
No 483
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=77.64 E-value=11 Score=32.97 Aligned_cols=88 Identities=18% Similarity=0.128 Sum_probs=51.9
Q ss_pred ceEEEEcCCh-h-HHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCCCCCCCEEEeccccccCChhHHHH
Q 017595 208 KQLVDVGGGL-G-VTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFERIPKGDAILMKWILHNWDDEHCLT 284 (369)
Q Consensus 208 ~~vLDvG~G~-G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~ 284 (369)
.+|.=||+|. | .++..+.+..++.++++.|. +...+.+.+.........|..+.....|+|+++- ++.....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilav-----p~~~~~~ 81 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAV-----PIKKTID 81 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECS-----CHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcC-----CHHHHHH
Confidence 5788899985 3 34555666655678888887 5555443322111112233322233359887764 4445567
Q ss_pred HHHHHHHh-CCCCCEEE
Q 017595 285 LLKNCYEA-IPENGKII 300 (369)
Q Consensus 285 ~L~~~~~~-L~pgG~ll 300 (369)
+++++... |+|+..++
T Consensus 82 v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 82 FIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHTSCCCTTCEEE
T ss_pred HHHHHHhcCCCCCCEEE
Confidence 88888888 88876444
No 484
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=77.37 E-value=1.5 Score=36.48 Aligned_cols=48 Identities=23% Similarity=0.177 Sum_probs=41.4
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhh
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFV 122 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~ 122 (369)
|++..+||+.+++ .++-++..++-|...|+++.. .+...+|+.+..+.
T Consensus 30 ~V~~~~LA~~Lgv----S~~SV~~~lkkL~e~GLV~~~-------~~Gv~LTe~G~~~A 77 (200)
T 2p8t_A 30 PLGRKQISERLEL----GEGSVRTLLRKLSHLDIIRSK-------QRGHFLTLKGKEIR 77 (200)
T ss_dssp CBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEC---------CEEECHHHHHHH
T ss_pred CccHHHHHHHhCC----CHHHHHHHHHHHHHCCCEEEe-------CCCeEECHHHHHHH
Confidence 8999999999999 999999999999999999874 36788888877544
No 485
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=77.23 E-value=1 Score=33.93 Aligned_cols=68 Identities=10% Similarity=0.196 Sum_probs=49.8
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCC------CCCCCCcccHHHHHHHHhcCccccccccC--CCCCCcceecChhch
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMP------SRNPNTGVMLDRILRLLVTNRVLRCSLSS--AGDNQRLYSLAPVAK 119 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~------~~~~~~~~~l~~~L~~L~~~g~l~~~~~~--~~~~~~~y~~t~~~~ 119 (369)
+++-|+..|.. +|.+--+|++.+. + ++..+...|+-|...|+|...... .+.....|++|+.++
T Consensus 10 l~~~IL~~L~~----~~~~Gyei~~~l~~~~~~~i----s~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~LT~~G~ 81 (115)
T 4esb_A 10 LEGCILYIISQ----EEVYGYELSTKLNKHGFTFV----SEGSIYPLLLRMQKEKLIEGTLKASSLGPKRKYYHITDKGL 81 (115)
T ss_dssp HHHHHHHHHHH----SCEEHHHHHHHHHHTTCTTC----CHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECHHHH
T ss_pred HHHHHHHHHHc----CCCCHHHHHHHHHHcCCCCC----CcChHHHHHHHHHHCCCeEEEeeecCCCCCcEEEEECHHHH
Confidence 44556677776 4889999998874 6 889999999999999999864221 111234699999988
Q ss_pred hhhc
Q 017595 120 YFVL 123 (369)
Q Consensus 120 ~~~~ 123 (369)
..+.
T Consensus 82 ~~l~ 85 (115)
T 4esb_A 82 EQLE 85 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 486
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=76.89 E-value=0.94 Score=34.41 Aligned_cols=43 Identities=9% Similarity=0.064 Sum_probs=36.1
Q ss_pred CCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecCh
Q 017595 64 KLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAP 116 (369)
Q Consensus 64 ~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~ 116 (369)
|.++.+|++.+++ ++..+..+|+.|+..|.+... ..+.|..+.
T Consensus 20 p~~~~~la~~~~~----~~~~~~~~l~~l~~~G~l~~i------~~~~~~~~~ 62 (121)
T 2pjp_A 20 PWWVRDLAKETGT----DEQAMRLTLRQAAQQGIITAI------VKDRYYRND 62 (121)
T ss_dssp CEEHHHHHHHTTC----CHHHHHHHHHHHHHTTSEEEE------ETTEEEEHH
T ss_pred CCCHHHHHHHhCC----CHHHHHHHHHHHHHCCCEEEe------cCCceECHH
Confidence 7799999999999 999999999999999988875 345555543
No 487
>2yu3_A DNA-directed RNA polymerase III 39 kDa polypeptide F variant; winged helix domain, RNA polymerase III C39 subunit, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.86 E-value=0.99 Score=32.70 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=41.6
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
-+.-|+..|.+.|. .+++..+|..++++ +..-+.+.|+.|++.|++...
T Consensus 38 ~E~lVy~~I~~aGn-~GIw~kdL~~~tnL----~~~~vtkiLK~LE~k~lIK~V 86 (95)
T 2yu3_A 38 QEKLVYQIIEDAGN-KGIWSRDVRYKSNL----PLTEINKILKNLESKKLIKAV 86 (95)
T ss_dssp HHHHHHHHHHHHTT-SCEEHHHHHHHHTC----CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHhCC-CCCCHHHHHHHhCC----CHHHHHHHHHHHHhCCCEEEe
Confidence 45567778877542 47999999999999 999999999999999999875
No 488
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.78 E-value=14 Score=29.60 Aligned_cols=90 Identities=17% Similarity=0.142 Sum_probs=49.8
Q ss_pred cceEEEEcCC-hhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCC--------CCCCCEEEecccccc
Q 017595 207 IKQLVDVGGG-LGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFER--------IPKGDAILMKWILHN 276 (369)
Q Consensus 207 ~~~vLDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~--------~p~~D~v~~~~vlh~ 276 (369)
..+|+=+|+| .|......+....+.+++++|. +...+.++. ..+.++.+|..++ ....|+|+..--
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~--- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP--- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS---
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC---
Confidence 4578889987 3444333333221346777777 555544432 2566777887541 223487775421
Q ss_pred CChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 277 WDDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 277 ~~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
+++....++ ...+.+.|++++++.
T Consensus 115 -~~~~~~~~~-~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 115 -HHQGNQTAL-EQLQRRNYKGQIAAI 138 (183)
T ss_dssp -SHHHHHHHH-HHHHHTTCCSEEEEE
T ss_pred -ChHHHHHHH-HHHHHHCCCCEEEEE
Confidence 123333333 455667888877764
No 489
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=76.00 E-value=1.4 Score=34.48 Aligned_cols=46 Identities=7% Similarity=0.052 Sum_probs=40.2
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL 102 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~ 102 (369)
+-.|++.|.+ |++|+.+||+++|+ ......-.|..|.-.|++.+..
T Consensus 13 k~~ILE~Lk~----G~~~t~~Iak~LGl----Shg~aq~~Ly~LeREG~V~~Vk 58 (165)
T 2vxz_A 13 LRDILALLAD----GCKTTSLIQQRLGL----SHGRAKALIYVLEKEGRVTRVA 58 (165)
T ss_dssp HHHHHHHHTT----CCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHh----CCccHHHHHHHhCC----cHHHHHHHHHHHHhcCceEEEE
Confidence 3457788883 59999999999999 9999999999999999998863
No 490
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=75.02 E-value=1.6 Score=43.76 Aligned_cols=118 Identities=15% Similarity=0.188 Sum_probs=67.0
Q ss_pred CcceEEEEcCChhHHHHHHHHhC-------CC-----CeEEEcch-h---HHHHhC-CC--------------C------
Q 017595 206 QIKQLVDVGGGLGVTLNIITSRY-------PH-----IEGVNFDL-P---HVIQNA-PS--------------Y------ 248 (369)
Q Consensus 206 ~~~~vLDvG~G~G~~~~~l~~~~-------p~-----~~~~~~D~-~---~~~~~a-~~--------------~------ 248 (369)
+.-+|+|+|-|+|......++.+ |+ ++++.++. | ..+..+ .. .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45799999999998777765542 32 56777764 3 222211 00 0
Q ss_pred --------C--CceEEeCCCCC---CCC---C--CCEEEecccc-ccCChhHHHHHHHHHHHhCCCCCEEEEEeccCCCC
Q 017595 249 --------R--GVKHIGGNMFE---RIP---K--GDAILMKWIL-HNWDDEHCLTLLKNCYEAIPENGKIIIIDRMPMVT 309 (369)
Q Consensus 249 --------~--rv~~~~~d~~~---~~p---~--~D~v~~~~vl-h~~~d~~~~~~L~~~~~~L~pgG~lli~e~~~~~~ 309 (369)
. ++++.-||+.+ .++ . .|++++-..- +.-|+--...+++.+.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------ 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 1 35677777755 222 1 2777663310 00011112467888888888888655211
Q ss_pred CcchHHHhhhhhhhHHHHHhhcCCccCCHHHHHHHHHHcCCcceeEE
Q 017595 310 PEATAAAREASMTDIIMLMQFSGGRERTTQEFMALANEAGFNGVNYE 356 (369)
Q Consensus 310 ~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 356 (369)
.....+..+.++||.+.++.
T Consensus 212 ---------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ---------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEecc
Confidence 01346777889999877654
No 491
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=74.38 E-value=1.7 Score=40.89 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=51.3
Q ss_pred HHHHHHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccc-c---CCCCCCcceecChhch
Q 017595 44 MQAAAELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSL-S---SAGDNQRLYSLAPVAK 119 (369)
Q Consensus 44 l~~a~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~-~---~~~~~~~~y~~t~~~~ 119 (369)
++..-+..|++.|... +++|..|||+.+|+ .+.-+.++++.|...|++.+.. . ..|+....|+.++...
T Consensus 36 ~r~~n~~~il~~l~~~---~~~sr~ela~~~gl----s~~tv~~~v~~L~~~gli~~~~~~~~s~~GR~~~~l~~~~~~~ 108 (429)
T 1z05_A 36 IKQINAGRVYKLIDQK---GPISRIDLSKESEL----APASITKITRELIDAHLIHETTVQEAISRGRPAVGLQTNNLGW 108 (429)
T ss_dssp HHHHHHHHHHHHHHHH---CSBCHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEECHHHHHHHTSCCEEEEECCTTE
T ss_pred HHHHHHHHHHHHHHHc---CCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCCEEeccccCCCCCCCCCeEEEECCCCC
Confidence 4445555688888876 59999999999999 9999999999999999998752 1 0122233466666543
No 492
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=74.32 E-value=1.2 Score=41.11 Aligned_cols=53 Identities=13% Similarity=0.134 Sum_probs=44.2
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecC
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLA 115 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t 115 (369)
+..|++.|.. +|.++++|++++|+ +...+...|-.|.-.|++... .+++|+++
T Consensus 330 ~~~vl~~l~~----~~~~~D~l~~~~gl----~~~~v~~~L~~LEl~G~v~~~------~Gg~~~~~ 382 (382)
T 3maj_A 330 RTRILALLGP----SPVGIDDLIRLSGI----SPAVVRTILLELELAGRLERH------GGSLVSLS 382 (382)
T ss_dssp HHHHHHHCCS----SCEEHHHHHHHHCC----CHHHHHHHHHHHHHTTCCEEC------TTSEEEC-
T ss_pred HHHHHHhhCC----CCCCHHHHHHHHCc----CHHHHHHHHHHHHhCCcEEeC------CCceEecC
Confidence 4458888865 48999999999999 999999999999999999875 46778763
No 493
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=74.27 E-value=3.4 Score=31.68 Aligned_cols=35 Identities=23% Similarity=0.179 Sum_probs=32.0
Q ss_pred CCC-CHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 63 AKL-SAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 63 ~~~-t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
..+ |..+||+.+|+ +..-+++-|+.|...|++...
T Consensus 26 ~~LPse~~La~~~gv----Sr~tVr~Al~~L~~~Gli~~~ 61 (129)
T 2ek5_A 26 QRVPSTNELAAFHRI----NPATARNGLTLLVEAGILYKK 61 (129)
T ss_dssp SCBCCHHHHHHHTTC----CHHHHHHHHHHHHTTTSEEEE
T ss_pred CcCcCHHHHHHHHCc----CHHHHHHHHHHHHHCCcEEEe
Confidence 466 89999999999 999999999999999999864
No 494
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=74.17 E-value=2.1 Score=38.51 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=43.9
Q ss_pred HhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecCh
Q 017595 49 ELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAP 116 (369)
Q Consensus 49 ~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~ 116 (369)
+..|++.|... +++|.++||+.+++ .+.-+.|-|+.|...|++.... .+..|++.+
T Consensus 7 ~~~Il~~L~~~---~~~s~~eLa~~l~v----S~~ti~r~l~~L~~~G~~i~~~-----~g~GY~l~~ 62 (321)
T 1bia_A 7 PLKLIALLANG---EFHSGEQLGETLGM----SRAAINKHIQTLRDWGVDVFTV-----PGKGYSLPE 62 (321)
T ss_dssp HHHHHHHHTTS---SCBCHHHHHHHHTS----CHHHHHHHHHHHHHTTCCCEEE-----TTTEEECSS
T ss_pred HHHHHHHHHcC---CCcCHHHHHHHHCC----CHHHHHHHHHHHHhCCCcEEEe-----cCCCcEEee
Confidence 44577788653 48999999999999 9999999999999999986431 233577654
No 495
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=73.88 E-value=0.66 Score=42.36 Aligned_cols=62 Identities=11% Similarity=0.042 Sum_probs=0.0
Q ss_pred HHhChhHHHHhcCCCCCCCHHHHHHhCCCCCCCCcccHHHHHHHHhcCccccccccCCCCCCcceecChhchhhhc
Q 017595 48 AELGVFEIIAKAGPGAKLSAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCSLSSAGDNQRLYSLAPVAKYFVL 123 (369)
Q Consensus 48 ~~lglfd~L~~~~~~~~~t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~~~~~~~~~~~y~~t~~~~~~~~ 123 (369)
-+..|+..|... +++|..+||+.+++ ++.-++|.|+.|...|++... .....+|+.++.+..
T Consensus 21 r~~~iL~~l~~~---~~~t~~eLa~~l~v----s~~Tv~r~l~~Le~~Glv~~~-------~~gi~LT~~G~~~~~ 82 (345)
T 2o0m_A 21 ERFQILRNIYWM---QPIGRRSLSETMGI----TERVLRTETDVLKQLNLIEPS-------KSGMTLTERGLEVYQ 82 (345)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE-------ecceEEcHHHHHHHH
Confidence 456788888775 48999999999999 999999999999999999742 234667777776654
No 496
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=73.83 E-value=9.1 Score=31.16 Aligned_cols=90 Identities=10% Similarity=0.051 Sum_probs=54.5
Q ss_pred cCCcceEEEEc--CChhHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCC-C--------CC-CC-CEEE
Q 017595 204 FEQIKQLVDVG--GGLGVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFE-R--------IP-KG-DAIL 269 (369)
Q Consensus 204 ~~~~~~vLDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~--------~p-~~-D~v~ 269 (369)
.....+||.+| +|.|..+..++... +.++++.+. +...+.+++..--... |..+ + .. .+ |+++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVG--DSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEE--ETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEe--eCCcHHHHHHHHHHhCCCCCeEEE
Confidence 55678999999 46787777777664 357777776 5444443332111111 2221 1 11 23 7776
Q ss_pred eccccccCChhHHHHHHHHHHHhCCCCCEEEEEecc
Q 017595 270 MKWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDRM 305 (369)
Q Consensus 270 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~~ 305 (369)
-+- .. ..++.+.+.|+|||+++++-..
T Consensus 113 ~~~-----g~----~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 113 NSL-----AG----EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp ECC-----CT----HHHHHHHHTEEEEEEEEECSCG
T ss_pred ECC-----ch----HHHHHHHHHhccCCEEEEEcCC
Confidence 432 11 3578889999999999987553
No 497
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=73.62 E-value=6.8 Score=35.53 Aligned_cols=93 Identities=11% Similarity=0.094 Sum_probs=56.7
Q ss_pred cCCcceEEEEcCCh-hHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCC------CCCC----CCCC-CEEEe
Q 017595 204 FEQIKQLVDVGGGL-GVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGN------MFER----IPKG-DAILM 270 (369)
Q Consensus 204 ~~~~~~vLDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d------~~~~----~p~~-D~v~~ 270 (369)
.....+||-+|+|. |.++..+++...--++++.|. +.-.+.+++..--.++..+ +.+. .+.+ |+|+-
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 55678999999874 889999998764327888876 5544444432111222211 1110 1123 88764
Q ss_pred ccccccCChhHHHHHHHHHHHhCCCCCEEEEEec
Q 017595 271 KWILHNWDDEHCLTLLKNCYEAIPENGKIIIIDR 304 (369)
Q Consensus 271 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~lli~e~ 304 (369)
.-- .+ ..++.+.++|+|||+++++-.
T Consensus 249 ~~g-----~~---~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 249 CTG-----AE---ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CSC-----CH---HHHHHHHHHSCTTCEEEECSC
T ss_pred CCC-----Ch---HHHHHHHHHhcCCCEEEEEec
Confidence 321 11 357788899999999998764
No 498
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=73.23 E-value=12 Score=34.48 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=61.5
Q ss_pred ceEEEEcCChhHHHHHHHHhCCCCe-EEEcch-hHHHHhCCC-CCCceEEeCCCCCC----C-------CCCCEEEeccc
Q 017595 208 KQLVDVGGGLGVTLNIITSRYPHIE-GVNFDL-PHVIQNAPS-YRGVKHIGGNMFER----I-------PKGDAILMKWI 273 (369)
Q Consensus 208 ~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~----~-------p~~D~v~~~~v 273 (369)
.+++|+-||.|.++..+..+. .+ +..+|. +..++..+. .+...++.+|+.+- + +..|+++...-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 589999999999999998875 44 346777 555554332 46778888998762 2 12399987766
Q ss_pred cccCCh-------hHHHHHHH---HHHHhCCCCCEEEEEeccCC
Q 017595 274 LHNWDD-------EHCLTLLK---NCYEAIPENGKIIIIDRMPM 307 (369)
Q Consensus 274 lh~~~d-------~~~~~~L~---~~~~~L~pgG~lli~e~~~~ 307 (369)
-..++- +....++. ++.+.++| ++++.|.+..
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~g 122 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPG 122 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchH
Confidence 555531 11223333 34445577 5788888753
No 499
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=72.58 E-value=1.5 Score=32.24 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=31.5
Q ss_pred CC-CHHHHHHhCCCCCCCCcccHHHHHHHHhcCcccccc
Q 017595 64 KL-SAAQIAAQMPSRNPNTGVMLDRILRLLVTNRVLRCS 101 (369)
Q Consensus 64 ~~-t~~~La~~~~~~~~~~~~~l~~~L~~L~~~g~l~~~ 101 (369)
.+ +..+||+.+|+ ...-+++-|+.|...|+|...
T Consensus 42 ~lps~~eLa~~lgV----Sr~tVr~al~~L~~~GlI~~~ 76 (102)
T 2b0l_A 42 GLLVASKIADRVGI----TRSVIVNALRKLESAGVIESR 76 (102)
T ss_dssp EEECHHHHHHHHTC----CHHHHHHHHHHHHHTTSEEEE
T ss_pred cCCCHHHHHHHHCc----CHHHHHHHHHHHHHCCCEEEE
Confidence 55 99999999999 999999999999999999864
No 500
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.50 E-value=16 Score=27.81 Aligned_cols=89 Identities=17% Similarity=0.132 Sum_probs=53.8
Q ss_pred cceEEEEcCCh-hHHHHHHHHhCCCCeEEEcch-hHHHHhCCCCCCceEEeCCCCCC--C-----CCCCEEEeccccccC
Q 017595 207 IKQLVDVGGGL-GVTLNIITSRYPHIEGVNFDL-PHVIQNAPSYRGVKHIGGNMFER--I-----PKGDAILMKWILHNW 277 (369)
Q Consensus 207 ~~~vLDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~--~-----p~~D~v~~~~vlh~~ 277 (369)
..+|+=+|+|. |......+... +.+++++|. +..++.+++ .++.++.+|..++ + ...|+++..--
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~---- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP---- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS----
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC----
Confidence 36888899984 55444444432 457888887 666665543 4778899998762 1 12387765432
Q ss_pred ChhHHHHHHHHHHHhCCCCCEEEEE
Q 017595 278 DDEHCLTLLKNCYEAIPENGKIIII 302 (369)
Q Consensus 278 ~d~~~~~~L~~~~~~L~pgG~lli~ 302 (369)
+++....+.. ..+.+.|+.+++..
T Consensus 81 ~~~~n~~~~~-~a~~~~~~~~iiar 104 (140)
T 3fwz_A 81 NGYEAGEIVA-SARAKNPDIEIIAR 104 (140)
T ss_dssp CHHHHHHHHH-HHHHHCSSSEEEEE
T ss_pred ChHHHHHHHH-HHHHHCCCCeEEEE
Confidence 2233333444 45667788876653
Done!