Query 017598
Match_columns 369
No_of_seqs 203 out of 1797
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 10:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 3.4E-55 7.5E-60 411.0 23.4 302 17-320 49-389 (390)
2 KOG0697 Protein phosphatase 1B 100.0 8.6E-48 1.9E-52 341.7 21.4 257 34-344 23-292 (379)
3 PLN03145 Protein phosphatase 2 100.0 3.4E-46 7.4E-51 359.4 28.1 255 36-345 69-332 (365)
4 KOG0698 Serine/threonine prote 100.0 7E-46 1.5E-50 355.2 28.7 265 30-351 37-312 (330)
5 PTZ00224 protein phosphatase 2 100.0 1.7E-43 3.7E-48 341.8 28.7 242 36-346 26-274 (381)
6 PF00481 PP2C: Protein phospha 100.0 7.9E-44 1.7E-48 330.3 16.3 239 35-309 2-249 (254)
7 COG0631 PTC1 Serine/threonine 100.0 1.6E-40 3.6E-45 308.3 20.7 237 36-346 12-255 (262)
8 KOG0699 Serine/threonine prote 100.0 7.5E-40 1.6E-44 300.4 19.9 173 135-347 330-507 (542)
9 PRK14559 putative protein seri 100.0 1.6E-35 3.5E-40 301.3 25.2 248 34-346 377-638 (645)
10 cd00143 PP2Cc Serine/threonine 100.0 5.6E-35 1.2E-39 269.5 25.4 240 37-342 5-254 (254)
11 smart00332 PP2Cc Serine/threon 100.0 2.8E-34 6.1E-39 265.4 25.0 235 39-340 12-255 (255)
12 KOG1323 Serine/threonine phosp 100.0 1.1E-27 2.5E-32 218.2 22.9 252 60-345 138-489 (493)
13 KOG1379 Serine/threonine prote 99.9 1.7E-24 3.7E-29 197.7 19.0 221 45-342 90-330 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 1.5E-19 3.3E-24 162.8 11.8 187 37-292 3-194 (212)
15 KOG0618 Serine/threonine phosp 99.8 4E-18 8.7E-23 174.4 15.2 217 64-346 549-775 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.7 1.2E-16 2.5E-21 141.9 17.3 175 41-305 12-191 (193)
17 TIGR02865 spore_II_E stage II 99.6 7.9E-14 1.7E-18 147.0 18.8 192 41-342 562-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 4.5E-12 9.8E-17 112.2 19.2 179 65-343 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.3 6.3E-05 1.4E-09 73.6 18.0 180 65-343 174-366 (367)
20 PRK10693 response regulator of 62.7 92 0.002 29.3 10.8 44 108-161 208-253 (303)
21 PRK06369 nac nascent polypepti 44.2 79 0.0017 25.5 5.8 44 250-293 38-88 (115)
22 COG0631 PTC1 Serine/threonine 32.5 3E+02 0.0065 25.4 8.8 89 74-164 49-145 (262)
23 PF09436 DUF2016: Domain of un 31.8 28 0.0006 25.6 1.3 18 264-282 26-43 (72)
24 PF01436 NHL: NHL repeat; Int 26.4 1.4E+02 0.003 17.2 3.6 21 141-161 7-27 (28)
25 COG2168 DsrH Uncharacterized c 26.0 55 0.0012 25.4 2.1 34 259-293 19-52 (96)
26 TIGR00264 alpha-NAC-related pr 20.3 3.9E+02 0.0084 21.6 6.0 45 249-293 41-90 (116)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-55 Score=410.98 Aligned_cols=302 Identities=54% Similarity=0.866 Sum_probs=270.5
Q ss_pred CCCCeeeccCCCCCccCceeeEEecCCCCCccchhhccCCCCCCCC-CCCcEEEEEecCCChHHHHHHHHHHHHHHHHHh
Q 017598 17 RIDGLLWYKDLGPHVYGEFSMALVQANSIMEDQCQLESGPLSSSNS-GPHGTFVGVYDGHGGPETARFISDNLFQNLKRF 95 (369)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ED~~~~~~~~~~~~~~-~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~ 95 (369)
+.++..|+++...+..|.++++..+.+..++|...+..+....... ++++.|+||||||||..+++|++++|..++...
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999876556655555544322222 568899999999999999999999999988832
Q ss_pred H------------hh--------------------c-ccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEe
Q 017598 96 A------------SE--------------------H-HEMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVG 142 (369)
Q Consensus 96 ~------------~~--------------------~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~ 142 (369)
+ .+ . .....++|.+||.+++++|...+.+.+...++...+|+||+++
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 1 11 1 3567889999999999999999988889999999999999999
Q ss_pred EEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCCCCeEEEecceeeccCccccccccc
Q 017598 143 LICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIG 222 (369)
Q Consensus 143 ~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalG 222 (369)
+|.+..|||||+|||||+|.+..+....+.++|||.||+.+++.|++||...||++..+++.++ ||++|.|.+|||||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAfG 286 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAFG 286 (390)
T ss_pred EEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeecc
Confidence 9999999999999999999888755555799999999999999999999999999999999988 79999999999999
Q ss_pred ccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCCccCHHHHHHHHhc-----cCcchH
Q 017598 223 DAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWEHLSNEEAVDIVQN-----YPRHGI 297 (369)
Q Consensus 223 d~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd~l~~~ei~~iv~~-----~~~~~~ 297 (369)
|.+||+..++.+++...|..|..+++|+|+++|.++.++|.+.|.||||||||||++|+++|++++|.. .+.+.+
T Consensus 287 d~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~ 366 (390)
T KOG0700|consen 287 DGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNP 366 (390)
T ss_pred ceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 678899
Q ss_pred HHHHHHHHHHHHHHhhhhhhccc
Q 017598 298 ARRLVKAALKEAAKKREMRFSDL 320 (369)
Q Consensus 298 a~~L~~~A~~~~~~~~~~~~~~~ 320 (369)
|+.|++.|+..+++++.|+++++
T Consensus 367 A~hLIr~aL~~aakk~~~r~s~l 389 (390)
T KOG0700|consen 367 ATHLIRHALGRAAKKRGMRLSDL 389 (390)
T ss_pred HHHHHHHHHhhhhhhccccHhhc
Confidence 99999999999998877776543
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-48 Score=341.72 Aligned_cols=257 Identities=25% Similarity=0.428 Sum_probs=215.5
Q ss_pred ceeeEEecCCC-CCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHh--h----c-ccccHH
Q 017598 34 EFSMALVQANS-IMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFAS--E----H-HEMSEN 105 (369)
Q Consensus 34 ~~s~~~~~~~~-~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~--~----~-~~~~~~ 105 (369)
.|+++.+|+|+ .|||++...... ..+-+++.||||||||.|++.|.+++++|.+.|..... . . -++.+.
T Consensus 23 ryg~SSMQGWR~eMEDah~A~~~l---~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~ 99 (379)
T KOG0697|consen 23 RYGVSSMQGWRVEMEDAHTAVAGL---PSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEK 99 (379)
T ss_pred eeeeccccchhhhhhhhhhhhhcC---CCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHh
Confidence 46789999988 899999876443 35567899999999999999999999999999875321 1 1 135677
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCCh
Q 017598 106 VIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIE 185 (369)
Q Consensus 106 ~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~ 185 (369)
-|+..|.++++.+...... .....++|||++.+++...++|++|+||||++++|++ .++.-|+||+|..+
T Consensus 100 GIrtGFL~iDE~mr~~~~~----~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng------~~~f~TqDHKP~~p 169 (379)
T KOG0697|consen 100 GIRTGFLSIDEIMRTLSDI----SKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG------EVVFSTQDHKPYLP 169 (379)
T ss_pred hHhhcceeHHHHHhhhhhh----hcccccCCceEEEEEecCceEEEEecCcchhheecCC------ceEEeccCCCCCCh
Confidence 8889999998876554322 2223459999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCC
Q 017598 186 SVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPE 265 (369)
Q Consensus 186 ~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~ 265 (369)
.|++||+.++ +.+..+ |++|.|++||||||++||... ..++.+++|+++|+++....+..
T Consensus 170 ~EkeRIqnAG----GSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~R~ee 229 (379)
T KOG0697|consen 170 KEKERIQNAG----GSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIERSEE 229 (379)
T ss_pred HHHHHHhcCC----CeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEeecccc
Confidence 9999999875 333333 999999999999999999864 33456889999999999999999
Q ss_pred CeEEEEEcCCCCCccCHHHHHHHHhccC-----cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEE
Q 017598 266 DQFLIFASDGLWEHLSNEEAVDIVQNYP-----RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVI 340 (369)
Q Consensus 266 D~fLvLaSDGlwd~l~~~ei~~iv~~~~-----~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv 340 (369)
|.||||||||+||+|+++|++++++... ...++..+++.++-+| ++||+|+|+|
T Consensus 230 deFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKG---------------------SRDNMsivlv 288 (379)
T KOG0697|consen 230 DEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKG---------------------SRDNMSIVLV 288 (379)
T ss_pred CcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhcc---------------------CccCceEEEE
Confidence 9999999999999999999999998853 6677888888888765 8999999999
Q ss_pred EcCC
Q 017598 341 YLDP 344 (369)
Q Consensus 341 ~l~~ 344 (369)
.|..
T Consensus 289 cfp~ 292 (379)
T KOG0697|consen 289 CFPG 292 (379)
T ss_pred ecCC
Confidence 9853
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.4e-46 Score=359.41 Aligned_cols=255 Identities=28% Similarity=0.420 Sum_probs=200.4
Q ss_pred eeEEecCCCCCccchhhccCCCC----CCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHH
Q 017598 36 SMALVQANSIMEDQCQLESGPLS----SSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAF 111 (369)
Q Consensus 36 s~~~~~~~~~~ED~~~~~~~~~~----~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~ 111 (369)
+.+..|.|..|||++++..+... .........||||||||||+.++++|++.+++.|.+.. .....+.++|.++|
T Consensus 69 ~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~-~~~~~~~~al~~af 147 (365)
T PLN03145 69 AWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE-DFPREIEKVVSSAF 147 (365)
T ss_pred EEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHH
Confidence 44555668899999876443210 00112245899999999999999999999999988632 22335678899999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHH
Q 017598 112 AATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDEL 191 (369)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri 191 (369)
..++..|.+.... .....+|||+++++|.++.+|+|||||||+|+++.+ .+++||+||++.++.|++||
T Consensus 148 ~~~d~~~~~~~~~-----~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g------~~~~LT~DH~~~~~~E~~RI 216 (365)
T PLN03145 148 LQTDTAFAEACSL-----DASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG------KAIEMSRDHKPMCSKERKRI 216 (365)
T ss_pred HHHhHHHHhhhcc-----ccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC------eEEEecCCCCCCCHHHHHHH
Confidence 9999987654211 122359999999999999999999999999999987 89999999999999999999
Q ss_pred HhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEE
Q 017598 192 HSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIF 271 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvL 271 (369)
.+.+.. + . .+ |++|.+++||||||..+|... ....+.++++|++..+++.++|.||||
T Consensus 217 ~~~Gg~----v-~-~g--~v~g~l~vTRalGD~~~k~~k--------------~~~~~~vs~ePdv~~~~l~~~D~fLIL 274 (365)
T PLN03145 217 EASGGY----V-Y-DG--YLNGQLNVARALGDWHMEGMK--------------GSDGGPLSAEPELMTTQLTEEDEFLII 274 (365)
T ss_pred HHcCCc----e-e-cc--eECCccccccccccccccccc--------------cccCCCcceEEEEEEEECCCCCEEEEE
Confidence 876432 1 1 12 788989999999998876421 011123689999999999999999999
Q ss_pred EcCCCCCccCHHHHHHHHhc----c-CcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCC
Q 017598 272 ASDGLWEHLSNEEAVDIVQN----Y-PRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPG 345 (369)
Q Consensus 272 aSDGlwd~l~~~ei~~iv~~----~-~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~ 345 (369)
|||||||+|+++++.+++.. . .++++|+.|++.|+.. ++.||||||||+|+..
T Consensus 275 aSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r---------------------gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 275 GCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR---------------------KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred eCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC---------------------CCCCCEEEEEEEeecC
Confidence 99999999999998776643 2 3678899999999864 4899999999999974
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-46 Score=355.22 Aligned_cols=265 Identities=37% Similarity=0.541 Sum_probs=216.3
Q ss_pred CccCceeeEEecC-CCCCccchhhccCCCCCCCCCC-CcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhccc--ccHH
Q 017598 30 HVYGEFSMALVQA-NSIMEDQCQLESGPLSSSNSGP-HGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHE--MSEN 105 (369)
Q Consensus 30 ~~~~~~s~~~~~~-~~~~ED~~~~~~~~~~~~~~~~-~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~--~~~~ 105 (369)
...-..+.+..++ +..|||++.............. ...||||||||||..+|+|+.++|+..+.+....... ....
T Consensus 37 ~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~ 116 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKD 116 (330)
T ss_pred ccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 3344445556666 5579999987766432222333 6899999999999999999999999999986655443 4889
Q ss_pred HHHHHHH-HHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCC-eEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCC
Q 017598 106 VIRKAFA-ATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSG-LLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNAN 183 (369)
Q Consensus 106 ~l~~a~~-~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~-~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~ 183 (369)
+++++|. .++..+... ......+|||++++++.++ +|||||+|||||+|++.+ ..+++||.||+|+
T Consensus 117 a~~~~F~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~-----~~a~~Ls~DHkP~ 184 (330)
T KOG0698|consen 117 ALRRAFLTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG-----GVAVQLSVDHKPD 184 (330)
T ss_pred HHHHHHHHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC-----CeeeeCCCCCCCC
Confidence 9999999 599988764 1113568899988888855 999999999999999864 2799999999999
Q ss_pred ChHHHHHHHhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcC
Q 017598 184 IESVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLY 263 (369)
Q Consensus 184 ~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~ 263 (369)
.+.|++||++.+ +.+....+.+|++|.|++||+|||..+|. +.|+++|++....+.
T Consensus 185 ~~~E~~RI~~~G----G~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~ 240 (330)
T KOG0698|consen 185 REDERERIEAAG----GRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKIN 240 (330)
T ss_pred cHHHHHHHHHcC----CEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcC
Confidence 999999999984 44444555789999999999999999885 348999999999999
Q ss_pred CCCeEEEEEcCCCCCccCHHHHHHHHhcc-----CcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEE
Q 017598 264 PEDQFLIFASDGLWEHLSNEEAVDIVQNY-----PRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVV 338 (369)
Q Consensus 264 ~~D~fLvLaSDGlwd~l~~~ei~~iv~~~-----~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvi 338 (369)
..|+|||||||||||+|+++|++++++.. .+..++..|...|+. |++.||||||
T Consensus 241 ~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~---------------------~~s~Dnitvv 299 (330)
T KOG0698|consen 241 SDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS---------------------RGSKDNITVV 299 (330)
T ss_pred CCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh---------------------cCCCCCeEEE
Confidence 99999999999999999999999999984 256677777777765 4589999999
Q ss_pred EEEcCCCcccCCC
Q 017598 339 VIYLDPGLIDQSF 351 (369)
Q Consensus 339 vv~l~~~~~~~~~ 351 (369)
||.|.+......+
T Consensus 300 vV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 300 VVRLKSSPKSPSS 312 (330)
T ss_pred EEEecCccccccC
Confidence 9999988765554
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.7e-43 Score=341.82 Aligned_cols=242 Identities=27% Similarity=0.377 Sum_probs=194.4
Q ss_pred eeEEecCCCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHH
Q 017598 36 SMALVQANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATE 115 (369)
Q Consensus 36 s~~~~~~~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~ 115 (369)
+.+..|.|+.|||++.+.... +..||||||||||..+|+++++.|.+.+.+.. .....+.|++++..++
T Consensus 26 ~~s~~G~R~~nED~~~v~~~~--------~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~---~~~~~~~l~~a~~~~d 94 (381)
T PTZ00224 26 SACVNGYRESMEDAHLLYLTD--------DWGFFGVFDGHVNDECSQYLARAWPQALEKEP---EPMTDERMEELCLEID 94 (381)
T ss_pred EEeCCCCCCCCCCeeEeccCC--------CceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHHH
Confidence 445556678999998764322 45799999999999999999999998776421 2234566889999999
Q ss_pred HHHHHHHHhhCCCCCCCcccccceEEeEEe-CCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhh
Q 017598 116 DDFLSLVKKEWPSKPNMASVGSCCLVGLIC-SGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSL 194 (369)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~-~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~ 194 (369)
+.+.+.. ..+|||+++++|. ++++++|||||||+|++|.+ ++++||+||++.++.|+.||...
T Consensus 95 ~~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g------~~~~LT~DH~~~~~~E~~RI~~~ 158 (381)
T PTZ00224 95 EEWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG------KLVFATEDHKPNNPGERQRIEAC 158 (381)
T ss_pred HHHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC------EEEEcccCCCCCCHHHHhHHHHc
Confidence 9886431 1368999988876 57999999999999999987 89999999999999999999876
Q ss_pred CCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcC
Q 017598 195 HPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASD 274 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSD 274 (369)
+.. +. ..|++|.+++||+|||..+|..+. .+...+.|+++|++..+.+.++| |||||||
T Consensus 159 gg~----v~----~~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSD 217 (381)
T PTZ00224 159 GGR----VV----SNRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILACD 217 (381)
T ss_pred cCE----ec----cccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEECC
Confidence 421 11 128889999999999998886541 11234457899999999999888 6889999
Q ss_pred CCCC-ccCHHHHHHHHhc-----cCcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCCc
Q 017598 275 GLWE-HLSNEEAVDIVQN-----YPRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPGL 346 (369)
Q Consensus 275 Glwd-~l~~~ei~~iv~~-----~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~ 346 (369)
|||| +++++|+.+++.+ ..++++|+.|++.|+.+ |+.||||||||++....
T Consensus 218 GL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~r---------------------Gs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 218 GVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRR---------------------GSKDNISCLIVQLKDGA 274 (381)
T ss_pred CcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc---------------------CCCCCEEEEEEEeeCCC
Confidence 9999 8999999999974 23678899999999874 48999999999998764
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=7.9e-44 Score=330.31 Aligned_cols=239 Identities=37% Similarity=0.522 Sum_probs=188.9
Q ss_pred eeeEEecC-CCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhccc-ccHHHHHHHHH
Q 017598 35 FSMALVQA-NSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHE-MSENVIRKAFA 112 (369)
Q Consensus 35 ~s~~~~~~-~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~ 112 (369)
++.+.+++ |..|||++.+..+.. ......+..+|+|||||||..+++++++.++..+.+....... ...++|..+|.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~-~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFN-SNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEET-CCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcc-ccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 44555555 669999999876431 1134457899999999999999999999999988886655555 78899999999
Q ss_pred H-HHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEE-EcCCCCCCCChHHHHH
Q 017598 113 A-TEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAI-QVSMEHNANIESVRDE 190 (369)
Q Consensus 113 ~-~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~-~Lt~DH~~~~~~e~~r 190 (369)
. +++.+...... . ....+|||+++++|.+++||+|||||||+|+++.+ ... +||+||+|.++.|++|
T Consensus 81 ~~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~------~~~~~Lt~dH~~~~~~E~~R 149 (254)
T PF00481_consen 81 AFTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG------GIIKQLTRDHKPSNPDERER 149 (254)
T ss_dssp HHHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT------EEEEESS---STTSHHHHHH
T ss_pred ecccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc------ccccccccccccchhhccce
Confidence 9 88887663221 1 23569999999999999999999999999999988 555 9999999999999999
Q ss_pred HHhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEE
Q 017598 191 LHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLI 270 (369)
Q Consensus 191 i~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLv 270 (369)
|.+.++.. .. .+|+.|.|++||+|||..+|..+ ++.|+++|++..+++.++|.|||
T Consensus 150 I~~~gg~v----~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~flv 205 (254)
T PF00481_consen 150 IRKAGGRV----SE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFLV 205 (254)
T ss_dssp HHHTT-GE----EE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEEE
T ss_pred eecccccc----cc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEEE
Confidence 99986432 21 45999999999999999988632 34689999999999999999999
Q ss_pred EEcCCCCCccCHHHHHHHHhccC-----cchHHHHHHHHHHHHH
Q 017598 271 FASDGLWEHLSNEEAVDIVQNYP-----RHGIARRLVKAALKEA 309 (369)
Q Consensus 271 LaSDGlwd~l~~~ei~~iv~~~~-----~~~~a~~L~~~A~~~~ 309 (369)
||||||||+|+++|+.+++.+.. ++.+|+.|+++|+..+
T Consensus 206 laSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~g 249 (254)
T PF00481_consen 206 LASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARG 249 (254)
T ss_dssp EE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTT
T ss_pred EEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999998863 6789999999998755
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=308.34 Aligned_cols=237 Identities=27% Similarity=0.367 Sum_probs=193.4
Q ss_pred eeEEecC-CCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhccc-c----cHHHHHH
Q 017598 36 SMALVQA-NSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHE-M----SENVIRK 109 (369)
Q Consensus 36 s~~~~~~-~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~-~----~~~~l~~ 109 (369)
..+..+. |..|||++.+..+. .... ..||+|||||||++++++|++.+.+.|.+.+..... . ..+.|.+
T Consensus 12 ~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~ 86 (262)
T COG0631 12 GLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKE 86 (262)
T ss_pred eeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 4445555 44799999987633 1112 579999999999999999999999999987655332 1 4788999
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHH
Q 017598 110 AFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRD 189 (369)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ 189 (369)
++..+++.+..... .......||||++++++.++++|+|||||||+|++|++ .+++||.||++.+..+++
T Consensus 87 ~~~~~n~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~------~~~~lT~DH~~~~~~~~~ 156 (262)
T COG0631 87 AILKANEAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG------ELKQLTEDHSLVNRLEQR 156 (262)
T ss_pred HHHHHHHHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC------ceEEeccCCcHHHHHHHh
Confidence 99999998877532 34456789999999999999999999999999999998 999999999999999888
Q ss_pred HHHhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEE
Q 017598 190 ELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFL 269 (369)
Q Consensus 190 ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fL 269 (369)
|+...++.... .|.+ ++|||||+.. .++|++....+.++| ||
T Consensus 157 ~~~~~~~~~~~--------~~~~---~ltralG~~~--------------------------~~~p~~~~~~~~~~d-~l 198 (262)
T COG0631 157 GIITPEEARSH--------PRRN---ALTRALGDFD--------------------------LLEPDITELELEPGD-FL 198 (262)
T ss_pred cCCCHHHHHhC--------ccch---hhhhhcCCCc--------------------------ccceeEEEEEcCCCC-EE
Confidence 76543221111 0222 5999999986 378999999999995 67
Q ss_pred EEEcCCCCCccCHHHHHHHHhc-cCcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCCc
Q 017598 270 IFASDGLWEHLSNEEAVDIVQN-YPRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPGL 346 (369)
Q Consensus 270 vLaSDGlwd~l~~~ei~~iv~~-~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~ 346 (369)
|||||||||.++++++.++++. ..+++++.+|++.|++.+ +.||+|+++|++....
T Consensus 199 lL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~g---------------------~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 199 LLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEGG---------------------GPDNITVVLVRLNGEG 255 (262)
T ss_pred EEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---------------------CCCceEEEEEEeeccc
Confidence 7999999999999999999995 558999999999999854 7999999999998765
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-40 Score=300.37 Aligned_cols=173 Identities=34% Similarity=0.520 Sum_probs=146.1
Q ss_pred cccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCCCCeEEEecceeeccCc
Q 017598 135 VGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHDPQIVVLKHKVWRVKGI 214 (369)
Q Consensus 135 ~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~ 214 (369)
+|||++||++.+.+|||||.||||++++|.+ +++-+|.||+|..+.|..||..+++ + +.+ .| ||+|.
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~G------kAvdmS~DHKPEDevE~~RI~~AGG---~-vtl-DG--RVNGG 396 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNG------KAVDMSVDHKPEDEVETNRIHAAGG---Q-VTL-DG--RVNGG 396 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCC------ceeecccCCCcccHHHHHHHHhcCC---e-Eee-cc--eecCc
Confidence 8999999999999999999999999999998 9999999999999999999998853 2 222 22 99999
Q ss_pred ccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCCccCHHHHHHHHhccC-
Q 017598 215 IQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWEHLSNEEAVDIVQNYP- 293 (369)
Q Consensus 215 l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd~l~~~ei~~iv~~~~- 293 (369)
|+++|||||+.||+.. ..|+..++|++-|||.+..|++.|+|+||||||||++|+.++++++|+...
T Consensus 397 LNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~ 464 (542)
T KOG0699|consen 397 LNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLA 464 (542)
T ss_pred cchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHh
Confidence 9999999999999743 445678999999999999999999999999999999999999999998743
Q ss_pred ----cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCCcc
Q 017598 294 ----RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPGLI 347 (369)
Q Consensus 294 ----~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~~ 347 (369)
...++..|++.++.-. .+ -.+.+.||+|||++.|+++.-
T Consensus 465 ~n~~ls~iceeL~D~CLAp~----T~-----------GDGTGCDNMT~ii~~Fkrk~~ 507 (542)
T KOG0699|consen 465 KNSSLSEICEELCDACLAPS----TD-----------GDGTGCDNMTVIITTFKRKSK 507 (542)
T ss_pred cCchHHHHHHHHHHhhcCCC----CC-----------CCCcCCCcceEEEEEeccchh
Confidence 4566677777666421 00 124479999999999985443
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.6e-35 Score=301.25 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=175.4
Q ss_pred ceeeEEecC-CCCCccchhhccCCC----CCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcc---cccHH
Q 017598 34 EFSMALVQA-NSIMEDQCQLESGPL----SSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHH---EMSEN 105 (369)
Q Consensus 34 ~~s~~~~~~-~~~~ED~~~~~~~~~----~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~---~~~~~ 105 (369)
..+.+..|. |+.|||++.+..... +.........+|+|||||||+.+++.||+.+.+.|.+.+.... ....+
T Consensus 377 ~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~ 456 (645)
T PRK14559 377 DAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEE 456 (645)
T ss_pred EEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHH
Confidence 344555665 678999987653210 0000112357999999999999888888877777766543221 12467
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCCh
Q 017598 106 VIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIE 185 (369)
Q Consensus 106 ~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~ 185 (369)
.|+++|..+|+.+.+...+. ......+||||++++++.++++|++||||||+|+++.+ +.+++||+||++...
T Consensus 457 ~L~~ai~~AN~~I~~~~~~~--~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~-----g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 457 TIREAIYLANEAIYDLNQQN--ARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRK-----GGLEQLTVDHEVGQR 529 (645)
T ss_pred HHHHHHHHHHHHHHHHhhhc--ccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecC-----CeEEEeCCCCCHHHH
Confidence 89999999999987653321 12234569999999999999999999999999998532 289999999998765
Q ss_pred HHHHHHHhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCC
Q 017598 186 SVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPE 265 (369)
Q Consensus 186 ~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~ 265 (369)
+.++++... ... .+ .+...+|||||+...+ ..+|++..+.+.++
T Consensus 530 lv~~Gi~~~---~a~--------~~-p~~~~LTrALG~~~~~------------------------~l~Pdi~~~~L~~g 573 (645)
T PRK14559 530 EIQRGVEPQ---IAY--------AR-PDAYQLTQALGPRDNS------------------------AIQPDIQFLEIEED 573 (645)
T ss_pred HHHhCCCHH---HHh--------cC-cccceeeeccCCCCCC------------------------cccceEEEEEcCCC
Confidence 544332110 000 01 2334699999987532 45799999999988
Q ss_pred CeEEEEEcCCCCCc--cCH---HHHHHHHhcc-CcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEE
Q 017598 266 DQFLIFASDGLWEH--LSN---EEAVDIVQNY-PRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVV 339 (369)
Q Consensus 266 D~fLvLaSDGlwd~--l~~---~ei~~iv~~~-~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTviv 339 (369)
|. ||||||||||+ +.. +++..++... ...+++++|++.|+.++ +.||||+||
T Consensus 574 D~-lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~g---------------------g~DNITvIv 631 (645)
T PRK14559 574 TL-LLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYN---------------------GHDNITAIL 631 (645)
T ss_pred CE-EEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC---------------------CCCcEEEEE
Confidence 75 66899999994 554 4556666654 36788999999998754 799999999
Q ss_pred EEcCCCc
Q 017598 340 IYLDPGL 346 (369)
Q Consensus 340 v~l~~~~ 346 (369)
|+++..+
T Consensus 632 V~l~~~p 638 (645)
T PRK14559 632 VRLKVRP 638 (645)
T ss_pred EEeccCC
Confidence 9986443
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.6e-35 Score=269.46 Aligned_cols=240 Identities=39% Similarity=0.566 Sum_probs=193.9
Q ss_pred eEEecC-CCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhc----ccccHHHHHHHH
Q 017598 37 MALVQA-NSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEH----HEMSENVIRKAF 111 (369)
Q Consensus 37 ~~~~~~-~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~ 111 (369)
.+..++ |..|||++.+...... .+..+|+|||||||+..++++++.+.+.+.+..... ...+...|+++|
T Consensus 5 ~~~~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 79 (254)
T cd00143 5 VSDKGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAF 79 (254)
T ss_pred eecCCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 344454 6679999988643300 256999999999999999999999999999876554 345677888999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHH
Q 017598 112 AATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDEL 191 (369)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri 191 (369)
..+++.+....... .....+|||++++++.++.++++|+||||+|+++.+ .++++|.||++.++.+..|+
T Consensus 80 ~~~~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~------~~~~lt~dh~~~~~~~~~~i 149 (254)
T cd00143 80 LRADEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG------EAVQLTKDHKPVNEEERERI 149 (254)
T ss_pred HHHHHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC------ceeEcCCCCCCcChHHHHHH
Confidence 99998887654321 334569999999999999999999999999999987 89999999999988888888
Q ss_pred HhhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEc-CCCCeEEE
Q 017598 192 HSLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKL-YPEDQFLI 270 (369)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l-~~~D~fLv 270 (369)
...++... ..+.++...+||+||+..+| +.+..+|++..+.+ +++|. ||
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d~-il 199 (254)
T cd00143 150 EKAGGRVS--------NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDDF-LI 199 (254)
T ss_pred HHcCCcEE--------eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCcE-EE
Confidence 87654211 01344556799999998765 23588999999999 77775 77
Q ss_pred EEcCCCCCccCHHHHHHHHhccC----cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEc
Q 017598 271 FASDGLWEHLSNEEAVDIVQNYP----RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYL 342 (369)
Q Consensus 271 LaSDGlwd~l~~~ei~~iv~~~~----~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l 342 (369)
|||||||+++++++|.+++.... ++++|+.|++.|...+ +.||+|+||+++
T Consensus 200 l~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~---------------------~~Dn~t~i~~~~ 254 (254)
T cd00143 200 LASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG---------------------SHDNITVVVVRL 254 (254)
T ss_pred EECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhCC---------------------CCCCEEEEEEeC
Confidence 99999999999999999998754 7789999999997754 699999999975
No 11
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.8e-34 Score=265.45 Aligned_cols=235 Identities=40% Similarity=0.625 Sum_probs=189.7
Q ss_pred Eec-CCCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhccc---ccHHHHHHHHHHH
Q 017598 39 LVQ-ANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHE---MSENVIRKAFAAT 114 (369)
Q Consensus 39 ~~~-~~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~ 114 (369)
..+ .|..|||++++.... ..+..+|+|||||||..+|+++++.+.+.+.+....... .+...|++++..+
T Consensus 12 ~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 12 SMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred cCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 344 466999999876541 136899999999999999999999999988875443332 4778899999999
Q ss_pred HHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhh
Q 017598 115 EDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSL 194 (369)
Q Consensus 115 ~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~ 194 (369)
++.+....... .....+|||++++++.++.++++|+||||+|+++.+ .++++|.||++.++.+..||...
T Consensus 86 ~~~~~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~------~~~~lt~dh~~~~~~~~~~i~~~ 155 (255)
T smart00332 86 DEEILEELESL----EEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG------KAVQLTEDHKPSNEDERARIEAA 155 (255)
T ss_pred HHHHHHhhhhc----cCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC------ceeEcCCCCCCcCHHHHHHHHHc
Confidence 99887654332 134569999999999999999999999999999987 78999999999999999998876
Q ss_pred CCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEc-CCCCeEEEEEc
Q 017598 195 HPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKL-YPEDQFLIFAS 273 (369)
Q Consensus 195 ~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l-~~~D~fLvLaS 273 (369)
+... . .+ +.++...+||++|+..+| |.+.++|++...++ .++|. |||||
T Consensus 156 ~~~~-----~-~~--~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d~-ill~S 205 (255)
T smart00332 156 GGFV-----I-NG--RVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDDF-LILAS 205 (255)
T ss_pred CCEE-----E-CC--eECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCcE-EEEEC
Confidence 4311 1 11 445556799999998765 45789999999996 77775 77999
Q ss_pred CCCCCccCHHHHHHHHhccC----cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEE
Q 017598 274 DGLWEHLSNEEAVDIVQNYP----RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVI 340 (369)
Q Consensus 274 DGlwd~l~~~ei~~iv~~~~----~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv 340 (369)
||||++++++++.+++.+.. +.++|+.|++.|... +..||+|+|||
T Consensus 206 DGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~---------------------~~~Dn~T~ivv 255 (255)
T smart00332 206 DGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR---------------------GSKDNITVIVV 255 (255)
T ss_pred CccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc---------------------CCCCCeEEEEC
Confidence 99999999999999998753 678889999988764 37999999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-27 Score=218.24 Aligned_cols=252 Identities=31% Similarity=0.413 Sum_probs=178.8
Q ss_pred CCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhh---------------------------------------cc
Q 017598 60 SNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASE---------------------------------------HH 100 (369)
Q Consensus 60 ~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~---------------------------------------~~ 100 (369)
+....++.+|.+||||.|..+|-.|++.+.+++.+.+.+ +.
T Consensus 138 ~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 138 FAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 344568899999999999999999999998888753320 00
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCC
Q 017598 101 EMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEH 180 (369)
Q Consensus 101 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH 180 (369)
....-+|+.||+..++.+..... .....+|||+++++..-++||+||.|||||+++|.+ .++.||.+.
T Consensus 218 ~LViGAlEsAFqemDeqiarer~------~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd------eirplS~ef 285 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARERQ------VWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND------EIRPLSKEF 285 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH------hhcCCCCceEEEeeeeccceEEccCCCceEEEEecC------Ceeeccccc
Confidence 12335778888888887654321 123468999999999999999999999999999998 899999999
Q ss_pred CCCChHHHHHHHhhC---CC-------------------CCCeEEEe-------------------------cceeeccC
Q 017598 181 NANIESVRDELHSLH---PH-------------------DPQIVVLK-------------------------HKVWRVKG 213 (369)
Q Consensus 181 ~~~~~~e~~ri~~~~---~~-------------------~~~~~~~~-------------------------~~~~rv~g 213 (369)
+| +.||+|++... |+ -+..+.++ ....|+.+
T Consensus 286 TP--etERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~ 363 (493)
T KOG1323|consen 286 TP--ETERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLA 363 (493)
T ss_pred Cc--HHHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhh
Confidence 87 55677776532 10 01111111 11236778
Q ss_pred cccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCC----CCeEEEEEcCCCCCccCHHHHHHHH
Q 017598 214 IIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYP----EDQFLIFASDGLWEHLSNEEAVDIV 289 (369)
Q Consensus 214 ~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~----~D~fLvLaSDGlwd~l~~~ei~~iv 289 (369)
.+.+||.|||+.+|-...+ -..+|++++.|+++++.|.. .|..+|||||||||+++++|++.++
T Consensus 364 TigVsRGlGDH~Lkv~dsn------------l~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~V 431 (493)
T KOG1323|consen 364 TIGVSRGLGDHHLKVVDSN------------LSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIV 431 (493)
T ss_pred hheeccccCcceeeeecCC------------cccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHH
Confidence 8999999999998865422 23578999999999999874 2457889999999999999999999
Q ss_pred hccC----c------chHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCC
Q 017598 290 QNYP----R------HGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPG 345 (369)
Q Consensus 290 ~~~~----~------~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~ 345 (369)
+... + ..+|+.|+..|........| +++. -+-|+-|||||.||-+...
T Consensus 432 rs~L~~~dp~Dp~RYt~aaqdlva~arg~~k~rgW-r~~n-------~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 432 RSFLPSTDPADPSRYTQAAQDLVAAARGQQKDRGW-RMNN-------GGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred HHhcCCCCCCChhHHHHHHHHHHHHhcCccCCCce-eccC-------CCcCCCCceEEEEEeccCC
Confidence 8853 1 23566666655433211111 0000 1236899999999998654
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-24 Score=197.68 Aligned_cols=221 Identities=22% Similarity=0.243 Sum_probs=153.2
Q ss_pred CCccchhhccCCCCCCCCCCCcEEEEEecCCChHH-----HHHHHHHHHHHHHHHhHh---hcccccHHHHHHHHHHHHH
Q 017598 45 IMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPE-----TARFISDNLFQNLKRFAS---EHHEMSENVIRKAFAATED 116 (369)
Q Consensus 45 ~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~-----~s~~a~~~l~~~l~~~~~---~~~~~~~~~l~~a~~~~~~ 116 (369)
..||++++..+. ...+.|||||+|||+ .+.|..+.+.++ .+... ..+..+...|.+|+.++-+
T Consensus 90 ~GEDa~Fvss~~--------~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~c-e~~v~~~~~~~~~P~~lL~~ay~~l~~ 160 (330)
T KOG1379|consen 90 GGEDAWFVSSNP--------HAIVMGVADGVGGWAEYGIDPGAFSRELMSNC-ERLVQNSDFNPSDPVNLLEKAYAELKS 160 (330)
T ss_pred CCCcceeeccCc--------ccceEEEccccchHhhcCcCHHHHHHHHHHHH-HHHhcccccCCCChHHHHHHHHHHHhh
Confidence 579999998765 789999999999998 666655555443 33222 2234677888887776544
Q ss_pred HHHHHHHhhCCCCCCCcccccceEEeEEe--CCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCC--CChHHHHHHH
Q 017598 117 DFLSLVKKEWPSKPNMASVGSCCLVGLIC--SGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNA--NIESVRDELH 192 (369)
Q Consensus 117 ~l~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~--~~~~e~~ri~ 192 (369)
+ +...-++||++++++. +++||+||+|||...++|++ ++++-|..+.. +.+...
T Consensus 161 ~------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G------~vv~~S~~Q~H~FN~PyQL---- 218 (330)
T KOG1379|consen 161 Q------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG------KVVFRSPEQQHYFNTPYQL---- 218 (330)
T ss_pred c------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC------EEEEcCchheeccCCceee----
Confidence 2 1112367777777776 78999999999999999998 88887765432 222100
Q ss_pred hhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEE
Q 017598 193 SLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFA 272 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLa 272 (369)
...|.+ ...+++|. .-..+.+.+.+++||. ||||
T Consensus 219 s~~p~~------------------~~~~~~d~---------------------------p~~ad~~~~~v~~GDv-IilA 252 (330)
T KOG1379|consen 219 SSPPEG------------------YSSYISDV---------------------------PDSADVTSFDVQKGDV-IILA 252 (330)
T ss_pred ccCCcc------------------ccccccCC---------------------------ccccceEEEeccCCCE-EEEe
Confidence 000000 11122332 2346788999999997 6799
Q ss_pred cCCCCCccCHHHHHHHHhccC------cchHHHHHHHHHHHHHHHhhhhhhccccc--cccCCCCCcCCceEEEEEEc
Q 017598 273 SDGLWEHLSNEEAVDIVQNYP------RHGIARRLVKAALKEAAKKREMRFSDLKK--IDRGVRRHFHDDVSVVVIYL 342 (369)
Q Consensus 273 SDGlwd~l~~~ei~~iv~~~~------~~~~a~~L~~~A~~~~~~~~~~~~~~~~~--~~~~~~rg~~DNiTvivv~l 342 (369)
||||||+|.+++|..++.... ++..|+.|++.|.+.+-.+.+.+...... -.....+|+.|||||||..+
T Consensus 253 TDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 253 TDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 999999999999999997642 67899999999998876555554444433 23335678899999999754
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.81 E-value=1.5e-19 Score=162.78 Aligned_cols=187 Identities=19% Similarity=0.281 Sum_probs=103.0
Q ss_pred eEEecCCCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHH-HHHHHHHHH
Q 017598 37 MALVQANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENV-IRKAFAATE 115 (369)
Q Consensus 37 ~~~~~~~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~ 115 (369)
.+..+.+.+|||++.+.... +..+++|+||+||...++.++..+.+.+.+.+.......... ....+..+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~--------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~ 74 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD--------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIK 74 (212)
T ss_dssp ----TTSSS--EEEEEE-TC--------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC--------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 44566778999999865444 567789999999888777777777777766555444332222 333334444
Q ss_pred HHHHHHH---HhhCCCCCCCcccccceEEeEEeCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHH
Q 017598 116 DDFLSLV---KKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELH 192 (369)
Q Consensus 116 ~~l~~~~---~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~ 192 (369)
+.+...+ ............++||++++++.++.++++|+||||+|+...+ +.+..++.+|+. ...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~-----g~~~~l~~~~~~-------~~~ 142 (212)
T PF13672_consen 75 KEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRN-----GEIQQLTDDHSG-------EYP 142 (212)
T ss_dssp HHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEET-----TEEEE-S---BH-------HHH
T ss_pred HHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECC-----CEEEEcCCCccc-------hhh
Confidence 4433211 0000012234568999999999999999999999999765443 288999999962 111
Q ss_pred hhCCCCCCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEE
Q 017598 193 SLHPHDPQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFA 272 (369)
Q Consensus 193 ~~~~~~~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLa 272 (369)
. .++.+..... ....++..+.+.++|. |+||
T Consensus 143 ~-----------------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~d~-ilL~ 173 (212)
T PF13672_consen 143 N-----------------------QTRSLTGDDP-------------------------EPDVQYGSIPLEEGDV-ILLC 173 (212)
T ss_dssp H-----------------------CTTSCCHHCC-------------------------CTETEEEEEE--TT-E-EEEE
T ss_pred h-----------------------hhhccCcccc-------------------------ccCCeEEEEEcCCCCE-EEEE
Confidence 0 1222322210 1233666778889998 5589
Q ss_pred cCCCCCccCHHH-HHHHHhcc
Q 017598 273 SDGLWEHLSNEE-AVDIVQNY 292 (369)
Q Consensus 273 SDGlwd~l~~~e-i~~iv~~~ 292 (369)
|||||+.+...+ +..++...
T Consensus 174 SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 174 SDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp -HHHHTTS-HHHHHHHH----
T ss_pred CcCccccCCCHHHHHHHhhhc
Confidence 999999998655 66666554
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.77 E-value=4e-18 Score=174.37 Aligned_cols=217 Identities=22% Similarity=0.264 Sum_probs=174.7
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeE
Q 017598 64 PHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGL 143 (369)
Q Consensus 64 ~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~ 143 (369)
.....||++||-+..+...++..++..++.+...... +..+.|..+|...++++-... ..-|..++.+.
T Consensus 549 ~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~-~et~~mr~~fl~~~rklg~~g----------~~lg~~~~~~~ 617 (1081)
T KOG0618|consen 549 NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYG-NETEQMRNTFLRLNRKLGEEG----------QVLGGSVVLCQ 617 (1081)
T ss_pred CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhhhhhhhh----------ccccchhhhee
Confidence 3568999999999999999999999999998665444 334559999999999873321 12444555555
Q ss_pred EeC--------CeEEEEEeCCceEEEEEecCCCCceeEEEcCCCC-CCCChHHHHHHHhhCCCCCCeEEEecceeeccCc
Q 017598 144 ICS--------GLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEH-NANIESVRDELHSLHPHDPQIVVLKHKVWRVKGI 214 (369)
Q Consensus 144 i~~--------~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH-~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~ 214 (369)
|.. .++++||+|+|.+++++.+ ...++|+-. -...++|.+||...++.. ..+ .+++|+
T Consensus 618 i~~d~~~~asS~~l~~Anvg~c~avls~ng------~~~p~t~~~~~~v~~eE~~RI~~~~g~i-----~ed--~k~ngv 684 (1081)
T KOG0618|consen 618 IVEDSLSPASSKTLFAANVGTCMAVLSRNG------KPLPTTRSPMLEVDREEYKRIVDSKGFI-----TED--NKLNGV 684 (1081)
T ss_pred ecccccCcccchhhhHhhhccchhhhhhcC------CcCcccccccccCCHHHHHHHHHhcCee-----cCC--Ceeece
Confidence 543 3789999999999999998 555555544 345889999999875422 212 288999
Q ss_pred ccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCCccCHHHHHHHHhccC-
Q 017598 215 IQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWEHLSNEEAVDIVQNYP- 293 (369)
Q Consensus 215 l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd~l~~~ei~~iv~~~~- 293 (369)
...||++|-+. ..|.|-+.|+|..+.|.+.|+|||+|+-++|++|+-+++++++++..
T Consensus 685 t~~tR~iG~~~---------------------l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~d 743 (1081)
T KOG0618|consen 685 TSSTRAIGPFS---------------------LFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVED 743 (1081)
T ss_pred eeeeeeccccc---------------------ccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCc
Confidence 99999999986 34678999999999999999999999999999999999999999765
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcCCCc
Q 017598 294 RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPGL 346 (369)
Q Consensus 294 ~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~ 346 (369)
+-.+|++|++.|...| ..||++|+||++....
T Consensus 744 pL~AAkKL~d~AqSYg---------------------c~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 744 PLLAAKKLCDLAQSYG---------------------CAENVSVLVVRLNHLE 775 (1081)
T ss_pred hHHHHHHHHHHHHhcc---------------------cccCeeEEEEEeecch
Confidence 7889999999999988 5899999999986543
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.74 E-value=1.2e-16 Score=141.90 Aligned_cols=175 Identities=19% Similarity=0.194 Sum_probs=124.2
Q ss_pred cCCCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHH
Q 017598 41 QANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLS 120 (369)
Q Consensus 41 ~~~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~ 120 (369)
.+....-|.+.+.... ++..+++|+||||+...|.+++..+...+.+..... ..+.+.+..+++.+..
T Consensus 12 p~~~~~GD~~~~~~~~-------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-----~~~~~~l~~~n~~l~~ 79 (193)
T smart00331 12 DATQVGGDFYDVVKLP-------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-----ISLSQILERLNRAIYE 79 (193)
T ss_pred chHhcCccEEEEEEeC-------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHHh
Confidence 3445667777665443 247999999999988888899999998888755332 1255566677776644
Q ss_pred HHHhhCCCCCCCcccccceEEeEE--eCCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCC
Q 017598 121 LVKKEWPSKPNMASVGSCCLVGLI--CSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHD 198 (369)
Q Consensus 121 ~~~~~~~~~~~~~~~GtT~~~~~i--~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~ 198 (369)
. ....+++|++++++ .+++++++|+||+|+|+++.+ ....+++.+
T Consensus 80 ~---------~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~-----~~~~~~~~~------------------- 126 (193)
T smart00331 80 N---------GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRAD-----GGLVEDLDD------------------- 126 (193)
T ss_pred c---------CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECC-----CCeEEEcCC-------------------
Confidence 3 12458999999998 578999999999999999832 023333322
Q ss_pred CCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCC
Q 017598 199 PQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWE 278 (369)
Q Consensus 199 ~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd 278 (369)
.++.+|... ..+++...+.++++|. |+|+|||||+
T Consensus 127 ------------------~~~~lG~~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e 161 (193)
T smart00331 127 ------------------LGAPLGLEP--------------------------DVEVDVRELTLEPGDL-LLLYTDGLTE 161 (193)
T ss_pred ------------------CCceeeeCC--------------------------CCcceeEEEeeCCCCE-EEEECCCccc
Confidence 223455432 2346677889999997 5589999999
Q ss_pred ccCHHHHHHHHhccC---cchHHHHHHHHH
Q 017598 279 HLSNEEAVDIVQNYP---RHGIARRLVKAA 305 (369)
Q Consensus 279 ~l~~~ei~~iv~~~~---~~~~a~~L~~~A 305 (369)
.++.+++.+++.+.. +++.++++++.+
T Consensus 162 ~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~ 191 (193)
T smart00331 162 ARNPERLEELLEELLGSPPAEIAQRILEEL 191 (193)
T ss_pred cCChHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 999999999998864 455566665554
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.57 E-value=7.9e-14 Score=147.04 Aligned_cols=192 Identities=18% Similarity=0.161 Sum_probs=134.2
Q ss_pred cCCCCCccchhhccCCCCCCCCCCCcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHH
Q 017598 41 QANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLS 120 (369)
Q Consensus 41 ~~~~~~ED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~ 120 (369)
.+...+.|.+.+.... ++..+++|+||+|....|..++..+.+.+.+.... ... ...++..+|+.+..
T Consensus 562 ~g~~vsGD~y~~~~l~-------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~-g~~----~~~ai~~lN~~L~~ 629 (764)
T TIGR02865 562 DGELVSGDSYSFGKLS-------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLES-GFD----REVAIKTVNSILSL 629 (764)
T ss_pred CCCcccCceEEEEEEC-------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHc-CCC----HHHHHHHHHHHHHh
Confidence 3456788988765433 24578899999997666667777777777664432 222 24566777776532
Q ss_pred HHHhhCCCCCCCcccccceEEeEEe--CCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCC
Q 017598 121 LVKKEWPSKPNMASVGSCCLVGLIC--SGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHD 198 (369)
Q Consensus 121 ~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~ 198 (369)
. ....+.+|+.+++++ .+++.++|+|+++.|+.|++ .+..++..+.|
T Consensus 630 ~---------~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~------~v~~i~s~~lP---------------- 678 (764)
T TIGR02865 630 R---------STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA------KVEVIRSSNLP---------------- 678 (764)
T ss_pred C---------CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC------EEEEecCCCce----------------
Confidence 2 112368999988885 67999999999999999876 66666543221
Q ss_pred CCeEEEecceeeccCcccccccccccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCC
Q 017598 199 PQIVVLKHKVWRVKGIIQVSRAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWE 278 (369)
Q Consensus 199 ~~~~~~~~~~~rv~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd 278 (369)
+|-.. ..+++....++.+||. |||+|||++|
T Consensus 679 ----------------------lGil~--------------------------~~~~~~~~~~L~~GD~-Lll~SDGv~E 709 (764)
T TIGR02865 679 ----------------------IGILD--------------------------EVDVELVRKKLKNGDL-IVMVSDGVLE 709 (764)
T ss_pred ----------------------eEecc--------------------------CCccceEEEEeCCCCE-EEEECCCCCc
Confidence 22111 2346667889999997 6699999999
Q ss_pred ccCHHH-----HHHHHhcc---CcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEc
Q 017598 279 HLSNEE-----AVDIVQNY---PRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYL 342 (369)
Q Consensus 279 ~l~~~e-----i~~iv~~~---~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l 342 (369)
..+.++ +.+++.+. ++++.++.|++.|..... ....||+|++++++
T Consensus 710 ~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~------------------~~~~DD~Tvlvirv 763 (764)
T TIGR02865 710 GEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS------------------GKIKDDMTVIVAKV 763 (764)
T ss_pred CCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC------------------CCCCCCeEEEEEEe
Confidence 886533 77777653 478889999999876531 12489999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.48 E-value=4.5e-12 Score=112.15 Aligned_cols=179 Identities=21% Similarity=0.240 Sum_probs=112.6
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEE
Q 017598 65 HGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLI 144 (369)
Q Consensus 65 ~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i 144 (369)
+..++.|+|+.|..-.|.+.+..+...+...... ... ..+.+..+|+.+...... ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~-~~~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDE-GLD----PEELLEALNRRLYRDLKG--------DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHT-TTS----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHc-CCC----HHHHHHHHHHHHHHHhhh--------ccccceEEEEEe
Confidence 5789999999995556666667777777665432 222 445566666666443211 136778887777
Q ss_pred e--CCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCCCCeEEEecceeeccCccccccccc
Q 017598 145 C--SGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAIG 222 (369)
Q Consensus 145 ~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRalG 222 (369)
. .+.++++|+|++++++++.++ .....+..... .+|
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~~~----~~~~~~~~~~~--------------------------------------~lG 107 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRPGG----REIEQLESEGP--------------------------------------PLG 107 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEETTC----TEEEEETCSSB--------------------------------------BCS
T ss_pred cccceEEEEeCCCCCCEEEEeccc----cceeecccCcc--------------------------------------cee
Confidence 5 568999999999999999741 02222221111 133
Q ss_pred ccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCCccCHH-------HHHHHHhccC--
Q 017598 223 DAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWEHLSNE-------EAVDIVQNYP-- 293 (369)
Q Consensus 223 d~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd~l~~~-------ei~~iv~~~~-- 293 (369)
-.. ...+....+.+.++|. |+|+||||+|....+ .+.+++.+..
T Consensus 108 ~~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~ 160 (193)
T PF07228_consen 108 IFE--------------------------DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGL 160 (193)
T ss_dssp SSC--------------------------TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS
T ss_pred eec--------------------------cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCC
Confidence 321 1345566889999998 668999999998543 4466676542
Q ss_pred -cchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcC
Q 017598 294 -RHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLD 343 (369)
Q Consensus 294 -~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~ 343 (369)
+++.++.|++.+...+ .....||+||++++++
T Consensus 161 ~~~~~~~~l~~~~~~~~------------------~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 161 SPQEIIDALLEAIDRFG------------------KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp -HHHHHHHHHHHHHHHT------------------TSSTSS-EEEEEEEE-
T ss_pred CHHHHHHHHHHHHHHhc------------------CCCCCCceEEEEEEEC
Confidence 5666666666666522 1236999999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.26 E-value=6.3e-05 Score=73.56 Aligned_cols=180 Identities=17% Similarity=0.192 Sum_probs=110.1
Q ss_pred CcEEEEEecCCC-hHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeE
Q 017598 65 HGTFVGVYDGHG-GPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGL 143 (369)
Q Consensus 65 ~~~l~~V~DGhG-G~~~s~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~ 143 (369)
...+++|.|..| |-.++-. +......+..........+.+. +..+|+.+.... . ..+-+|....+
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~----l~~~n~~~~~~~-------~--~~~f~T~~~~~ 239 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADV----LETLNRVLKQNL-------E--EDMFVTLFLGV 239 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHH----HHHHHHHHHhcc-------c--CCcEEEEEEEE
Confidence 578899999999 6655555 3333333333222212333333 444444433221 1 12667777777
Q ss_pred Ee--CCeEEEEEeCCceEEEEEecCCCCceeEEEcCCCCCCCChHHHHHHHhhCCCCCCeEEEecceeeccCcccccccc
Q 017598 144 IC--SGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVSRAI 221 (369)
Q Consensus 144 i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~Lt~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~g~l~vtRal 221 (369)
++ .+.+..+|+|=--+++.+.++.. .+..+. +....+
T Consensus 240 ~d~~~~~l~y~~aGH~p~~i~~~~~~~---~~~~l~--------------------------------------~~g~pi 278 (367)
T COG2208 240 YDLDSGELTYSNAGHEPALILSADGEI---EVEDLT--------------------------------------ALGLPI 278 (367)
T ss_pred EeccCCEEEEeeCCCCCeeEEEcCCCc---eeEEcc--------------------------------------CCCcee
Confidence 65 67999999999999988875100 011111 134455
Q ss_pred cccccccccccCcccccccCCCCCCCCCcEEeeeeEEEEEcCCCCeEEEEEcCCCCC-------ccCHHHHHHHHhcc--
Q 017598 222 GDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWE-------HLSNEEAVDIVQNY-- 292 (369)
Q Consensus 222 Gd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd-------~l~~~ei~~iv~~~-- 292 (369)
|... ...+.+....+.+||. |||.|||+.+ .+..+...+++...
T Consensus 279 G~~~--------------------------~~~~~~~~~~l~~gd~-lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~ 331 (367)
T COG2208 279 GLLP--------------------------DYQYEVASLQLEPGDL-LVLYTDGVTEARNSDGEFFGLERLLKILGRLLG 331 (367)
T ss_pred eecC--------------------------CccchheeEEecCCCE-EEEEcCCeeeeecCCccEecHHHHHHHHHHHhC
Confidence 6543 3456677889999887 7799999998 45666777777642
Q ss_pred -CcchHHHHHHHHHHHHHHHhhhhhhccccccccCCCCCcCCceEEEEEEcC
Q 017598 293 -PRHGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLD 343 (369)
Q Consensus 293 -~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~ 343 (369)
++++.++.+.+...+.... ....||+|++++++.
T Consensus 332 ~~~~e~~~~i~~~l~~~~~~-----------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 332 QPAEEILEAILESLEELQGD-----------------QIQDDDITLLVLKVK 366 (367)
T ss_pred CCHHHHHHHHHHHHHHhhCC-----------------ccccCceEEEEEEec
Confidence 3566666666666554421 224788999999975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=62.74 E-value=92 Score=29.34 Aligned_cols=44 Identities=11% Similarity=-0.044 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCcccccceEEeEEe--CCeEEEEEeCCceEEE
Q 017598 108 RKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLIC--SGLLYIANVGDSRVVL 161 (369)
Q Consensus 108 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSRa~l 161 (369)
.+.+..+|+.+.... . . .--|++..+++ .++|.++|.|-...++
T Consensus 208 ~~~l~~lN~~l~~~~------~---~-~~~t~~~~~~d~~~~~l~~~~AGhp~~~~ 253 (303)
T PRK10693 208 GALLKQVNHLLRQAN------L---P-GQFPLLVGYYHRELKNLILVSAGLNATLN 253 (303)
T ss_pred HHHHHHHHHHHHhcC------C---C-ceeeEEEEEEEcCCCeEEEEeCCCCCEEe
Confidence 445666777664431 0 1 12477777776 4689999999999884
No 21
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=44.16 E-value=79 Score=25.50 Aligned_cols=44 Identities=14% Similarity=0.201 Sum_probs=35.3
Q ss_pred cEEeeeeEEEEEcCCCCeEEEEEcCCCCC-------ccCHHHHHHHHhccC
Q 017598 250 IISAEPSILVHKLYPEDQFLIFASDGLWE-------HLSNEEAVDIVQNYP 293 (369)
Q Consensus 250 ~v~~~pdi~~~~l~~~D~fLvLaSDGlwd-------~l~~~ei~~iv~~~~ 293 (369)
+|+..|+++.++.+..+.|.|++..-.-+ .++.++|.-+..++.
T Consensus 38 ~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~g 88 (115)
T PRK06369 38 IVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQTG 88 (115)
T ss_pred EEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHHC
Confidence 58999999999999889999998877754 467777777776654
No 22
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=32.52 E-value=3e+02 Score=25.36 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=45.7
Q ss_pred CCCh-HHHHHHHHHHHHHHHHHhHhh-----cccccHHHHHHHHHHHHHHHH--HHHHhhCCCCCCCcccccceEEeEEe
Q 017598 74 GHGG-PETARFISDNLFQNLKRFASE-----HHEMSENVIRKAFAATEDDFL--SLVKKEWPSKPNMASVGSCCLVGLIC 145 (369)
Q Consensus 74 GhGG-~~~s~~a~~~l~~~l~~~~~~-----~~~~~~~~l~~a~~~~~~~l~--~~~~~~~~~~~~~~~~GtT~~~~~i~ 145 (369)
||-+ .-+|+.+.+.|.+.+.+.... ..+...+.+..+=..+.+.-. .........-.-....+..+.++-+-
T Consensus 49 Gh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vG 128 (262)
T COG0631 49 GHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVG 128 (262)
T ss_pred chhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEcc
Confidence 9884 558889999999988763210 123333333332222222111 11111100001112345566666666
Q ss_pred CCeEEEEEeCCceEEEEEe
Q 017598 146 SGLLYIANVGDSRVVLGRA 164 (369)
Q Consensus 146 ~~~l~vanvGDSRa~l~r~ 164 (369)
+.++|+..-| .+..+..
T Consensus 129 DSR~yl~~~~--~~~~lT~ 145 (262)
T COG0631 129 DSRAYLLRDG--ELKQLTE 145 (262)
T ss_pred CCeEEEEcCC--ceEEecc
Confidence 7799999888 5555543
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=31.81 E-value=28 Score=25.57 Aligned_cols=18 Identities=28% Similarity=0.613 Sum_probs=13.5
Q ss_pred CCCeEEEEEcCCCCCccCH
Q 017598 264 PEDQFLIFASDGLWEHLSN 282 (369)
Q Consensus 264 ~~D~fLvLaSDGlwd~l~~ 282 (369)
+|.+|| +|+||+|=.+..
T Consensus 26 ~G~Rll-va~nGv~lEv~r 43 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRR 43 (72)
T ss_pred CCcEEE-EecCcEEEEEec
Confidence 677755 799999966544
No 24
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=26.41 E-value=1.4e+02 Score=17.15 Aligned_cols=21 Identities=33% Similarity=0.642 Sum_probs=16.5
Q ss_pred EeEEeCCeEEEEEeCCceEEE
Q 017598 141 VGLICSGLLYIANVGDSRVVL 161 (369)
Q Consensus 141 ~~~i~~~~l~vanvGDSRa~l 161 (369)
+++-.++.+||+-.|..|+..
T Consensus 7 vav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 7 VAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEETTSEEEEEECCCTEEEE
T ss_pred EEEeCCCCEEEEECCCCEEEE
Confidence 344478899999999988865
No 25
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=26.04 E-value=55 Score=25.41 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=27.2
Q ss_pred EEEcCCCCeEEEEEcCCCCCccCHHHHHHHHhccC
Q 017598 259 VHKLYPEDQFLIFASDGLWEHLSNEEAVDIVQNYP 293 (369)
Q Consensus 259 ~~~l~~~D~fLvLaSDGlwd~l~~~ei~~iv~~~~ 293 (369)
..-+.++|. ++|+.|||+-.+...+..+.++..+
T Consensus 19 l~~l~~~D~-vlL~qdGV~aAl~~~~~~~sl~~~p 52 (96)
T COG2168 19 LRLLTEGDA-VLLLQDGVYAALKGNRYLASLRESP 52 (96)
T ss_pred HHHhcccCe-EEEEcccchhhhcCcHHHHHHhcCc
Confidence 345678898 5589999999998888888887765
No 26
>TIGR00264 alpha-NAC-related protein. This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.
Probab=20.25 E-value=3.9e+02 Score=21.61 Aligned_cols=45 Identities=9% Similarity=0.151 Sum_probs=35.3
Q ss_pred CcEEeeeeEEEEEcCCCCeEEEEEcCCCCC-----ccCHHHHHHHHhccC
Q 017598 249 PIISAEPSILVHKLYPEDQFLIFASDGLWE-----HLSNEEAVDIVQNYP 293 (369)
Q Consensus 249 p~v~~~pdi~~~~l~~~D~fLvLaSDGlwd-----~l~~~ei~~iv~~~~ 293 (369)
-+|...|.+...+.+....|-|+++.-.-+ .++.++|.-+..++.
T Consensus 41 ~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~~~~~~i~~eDI~lV~eq~g 90 (116)
T TIGR00264 41 EWIFENPKVQVMDILGVKTYQITGKPKKEKVEEEEEITEDDIELVMKQCN 90 (116)
T ss_pred eEEEecCeeEEEecCCcEEEEEecccEEeecccccCCCHHHHHHHHHHhC
Confidence 357889999999999888899888877644 377788877776654
Done!