BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017601
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q75BS7|YD156_ASHGO WD repeat-containing protein ACR194C OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ACR194C PE=3 SV=1
Length = 513
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 208 PNMLAVTE-GCQLTIWDLRMKENGGCLHRIC-GSVGDILYAVCSSSTGNIAVAGADRTVT 265
PN++ +T G + DLR K + + R+ +G A+ S ++A A DRT+
Sbjct: 300 PNVVMLTTLGGEFAQRDLRTKPDTMNIMRLSDKKIG--CMAIDPSRPYSVATASLDRTLR 357
Query: 266 IYDPRRWSALSRWVHCSKY---EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322
I+D R+ A W Y E+ S + + + +D+ + C + + ++F
Sbjct: 358 IWDLRKTVAKPDWSQYEDYASHEVVSTYNSRLSVSAVSYAPIDHTLVCNGYDNTVRLFNA 417
Query: 323 RGD 325
R D
Sbjct: 418 RAD 420
>sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog OS=Dictyostelium discoideum
GN=wdr61 PE=4 SV=1
Length = 299
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 204 VNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRT 263
+N N+++V+E ++I+ + E G L I + +L S + IAVAG D T
Sbjct: 107 LNSANNLVSVSESGNISIYSV---ETGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGT 163
Query: 264 VTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEV 308
V YD +S + I L FSS DS I+ D ++
Sbjct: 164 VLCYDVESGRRVSE-IKAHGVPIRSLCFSS-DSKTIFTGAEDSQI 206
>sp|Q54FW9|Y0555_DICDI WD repeat-containing protein DDB_G0290555 OS=Dictyostelium
discoideum GN=DDB_G0290555 PE=4 SV=1
Length = 508
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 8/138 (5%)
Query: 194 SLNFVQNLSPVNGGPNMLAVTEG---CQLTIWDLRMK---ENGGCLHRICGSVGDILYAV 247
SLN NLS P+ G LTIWDL + + H + V
Sbjct: 157 SLNVATNLSGFAMNPSNDKFAFGGKDVNLTIWDLEKQVKTYSAKFKHDFLNLQEPVSINV 216
Query: 248 CSSSTGNIAVAGADRTVTIYDPRRWSALSRW--VHCSKYEITGLSFSSIDSNYIYVQGVD 305
+ + G+D + YD R + S + V SK+ I + +++ +Y Y
Sbjct: 217 VKYMNDDKILIGSDFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHYFYASDSI 276
Query: 306 YEVFCGQWRESSKVFAFR 323
+VFC R S +V +F+
Sbjct: 277 GKVFCYDVRTSRQVGSFK 294
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 210 MLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDP 269
+++ ++ + +WD +E C+H C G + Y S IA AG D TV ++D
Sbjct: 160 IVSASDDKTVKLWDKSSRE---CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 270 RRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF---RGDS 326
R L + + GLSF NY+ D + E ++ +G +
Sbjct: 217 RTHRLLQHY-QLHSAAVNGLSFHP-SGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 327 NWLGFSKCSNRDVLGG 342
+ FS+ GG
Sbjct: 275 TTVAFSRTGEYFASGG 290
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 22/148 (14%)
Query: 148 EGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG 207
EG SGLCF+P + +A+ S+ K++ ++D RT TL S V P G
Sbjct: 501 EGPISGLCFNPMKSVLASA--SWDKTVRLWDMFDSWRTKETLALTSDALAV-TFRP--DG 555
Query: 208 PNMLAVTEGCQLTIWDLR-------------MKENGGCLHRIC---GSVGDILYAVCSSS 251
+ T Q+T WD +K L +I + G A+C S+
Sbjct: 556 AELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKGKAFTALCYSA 615
Query: 252 TGN-IAVAGADRTVTIYDPRRWSALSRW 278
G+ I G + V IY R + R+
Sbjct: 616 DGHSILAGGMSKFVCIYHVREQILMKRF 643
>sp|Q12510|YD156_YEAST WD repeat-containing protein YDL156W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YDL156W PE=1 SV=1
Length = 522
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 207 GPNMLAVTE-GCQLTIWDLRMKENGGCLHRIC-GSVGDILYAVCSSSTGNIAVAGADRTV 264
PN+L +T G + T +D R+K++ L R+ +G + A+ IA DRT+
Sbjct: 301 NPNVLFLTTLGGEFTTFDTRVKKSEYNLRRLADKKIGSM--AINPMRPYEIATGSLDRTL 358
Query: 265 TIYDPRRWSALSRWVHCSKY---EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVF 320
I+D R W Y EI S + + + D + C + ++ ++F
Sbjct: 359 KIWDTRNLVKKPEWSQYEDYPSHEIVSTYDSRLSVSAVSYSPTDGTLVCNGYDDTIRLF 417
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTI 266
G +++ ++ + +WD +E C+H C G + Y S IA AG D TV +
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRE---CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 267 YDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF---R 323
+D R L + + LSF NY+ D + E ++ +
Sbjct: 214 WDARTHRLLQHY-QLHSAAVNALSFHP-SGNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Query: 324 GDSNWLGFSKCSNRDVLGG 342
G + + FS+ GG
Sbjct: 272 GPATTVAFSRTGEYFASGG 290
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTI 266
G +++ ++ + +WD +E C+H C G + Y S IA AG D TV +
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRE---CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 267 YDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF---R 323
+D R L + + LSF NY+ D + E ++ +
Sbjct: 214 WDVRTHRLLQHY-QLHSAAVNALSFHP-SGNYLVTASSDSTLKILDLMEGRLLYTLHGHQ 271
Query: 324 GDSNWLGFSKCSNRDVLGG 342
G + + FS+ GG
Sbjct: 272 GPATTVAFSRTGEYFASGG 290
>sp|P75475|ARCA_MYCPN Putative arginine deiminase OS=Mycoplasma pneumoniae (strain ATCC
29342 / M129) GN=arcA PE=3 SV=2
Length = 404
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 208 PNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIY 267
PNMLAV + ++ D +K N I G + IL+ + I +AGAD T
Sbjct: 284 PNMLAVLKAWRIDFTDPALKWN-----EIAGDLSTILHTIIGQKPMLIPIAGADANQTEI 338
Query: 268 DPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSN 327
D + ++ + + G + + + + GV KV AF+G+
Sbjct: 339 DIETHFDGTNYLTIAPSVVVGYARNKLTHQTLEAAGV-------------KVIAFKGNQL 385
Query: 328 WLGF 331
LG
Sbjct: 386 SLGM 389
>sp|B9WD30|LIS1_CANDC Nuclear distribution protein PAC1 OS=Candida dubliniensis (strain
CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=PAC1 PE=3 SV=1
Length = 489
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 201 LSPVNGGPNMLAVTEGCQ---LTIWDLR----------MKENGGCLHRICGSVGDILY-A 246
++ V PN+ V GC L IW++ +K + +++IC + Y A
Sbjct: 124 VTTVKLHPNLPLVLNGCNDGNLYIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLA 183
Query: 247 VCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY 306
CSS D T+ I+D +++ + R ++ ++ ++ + FS ID++ +Y D
Sbjct: 184 TCSS----------DLTIKIWD-EKFNHI-RTLNGHEHTVSSIQFSPIDNSILYSVSRDK 231
Query: 307 EVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFV 351
+ + + +F G S W C + D++ SD+ FV
Sbjct: 232 NIRVWDIFQGISLKSFVGHSEW-----CRDLDIVS--SDNNGDFV 269
>sp|C5MJE8|LIS1_CANTT Nuclear distribution protein PAC1 OS=Candida tropicalis (strain
ATCC MYA-3404 / T1) GN=PAC1 PE=3 SV=1
Length = 490
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 26/135 (19%)
Query: 208 PNMLAVTEGCQ---LTIWDL----------RMKENGGCLHRICGSVGDILY-AVCSSSTG 253
PN+ V GC L IW+L R+K + ++++C S Y A CSS
Sbjct: 130 PNLPLVFNGCNDGNLYIWNLTNDDNTIPEKRIKAHTRSINKMCFSYRKPYYLATCSS--- 186
Query: 254 NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQW 313
D T+ I+D +++ + R ++ ++ ++ + FS DSN +Y D +
Sbjct: 187 -------DLTIKIWD-EKFNHI-RTLNGHEHTVSSVKFSPSDSNILYSVSRDKNIRVWDI 237
Query: 314 RESSKVFAFRGDSNW 328
+ + +F G S W
Sbjct: 238 SQGVCLKSFVGHSEW 252
>sp|P83774|GBLP_CANAL Guanine nucleotide-binding protein subunit beta-like protein
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=ASC1 PE=1 SV=2
Length = 317
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 196 NFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNI 255
+ VQ+++ G L+ + L +WDL E G R G GD+L + + I
Sbjct: 67 HIVQDVTISADGAYALSASWDRTLRLWDL---ETGETTQRFVGHKGDVLSVSIAKNLRQI 123
Query: 256 AVAGADRTVTIYD 268
A D+TV +++
Sbjct: 124 VSASRDKTVKVWN 136
>sp|P84739|PALST_EUGGR Photoactivated adenylate cyclase subunit alpha-like protein ST-
OS=Euglena gracilis GN=pacA PE=2 SV=2
Length = 1019
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 156 FSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLA--- 212
F P Q ++ +A+SF S++ Y +R Y ++ N +NL PV+ MLA
Sbjct: 569 FPPLQDVLSQLAKSFI-SLETYVPSTVVR------YLTAGNNPRNLQPVSVEVVMLATDI 621
Query: 213 -----VTEGCQLT-IWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTV 264
++E C LT +W + C IC G+++ + T A GAD V
Sbjct: 622 CSFTPLSEKCSLTEVWTICNTFIDACTSAICNEGGEVIKLIGDCVTAYFAPTGADNAV 679
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 154 LCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAV 213
+ FSP ++A+ A + + Q LRTL+ S +V++++ G + +
Sbjct: 774 VAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLK-----SHTGWVRSVAFSADGQTLASG 828
Query: 214 TEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGA-DRTVTIYDPRRW 272
+ + IW+ G CL G + Y++ S I V+G+ DRT+ ++D +
Sbjct: 829 SGDRTIKIWNY---HTGECLKTYIGHTNSV-YSIAYSPDSKILVSGSGDRTIKLWDCQTH 884
Query: 273 SALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGF 331
+ + +H E+ ++FS D + +D V R + A+ G+++W L
Sbjct: 885 ICI-KTLHGHTNEVCSVAFSP-DGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPV 942
Query: 332 SKCSNRDVLGGWSDSGSIFVAD 353
+ +R +L S+ ++ + D
Sbjct: 943 AFSPDRQILASGSNDKTVKLWD 964
>sp|Q08924|WDR6_YEAST Regulator of Ty1 transposition protein 10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RTT10 PE=1
SV=1
Length = 1013
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 207 GPNMLAVTEGCQL---TIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRT 263
GP+ + V G + IWDL + +H + G G I Y S++ +A DR+
Sbjct: 146 GPDKVYVNAGTVMGGVIIWDLFSETK---IHNLLGHEGSIFYVNLSNNGRYVASCSDDRS 202
Query: 264 VTIYDPRRWSALSR-WVHCSKYEITGLSFSSIDSNYIYV 301
+ ++D LS W H ++ I L F DS I V
Sbjct: 203 IRLWDLETGKQLSVGWSHTAR--IWNLMFFDNDSKLISV 239
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 247 VCSSSTGN-IAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD 305
V S GN +A AG DRTV I++P+ +V SK + + F S + ++ + D
Sbjct: 66 VAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSK-AVRSVDFDS--TGHLMLTASD 122
Query: 306 YEVFCGQWRESSKVF--AFRGDSNWLGFSKCS-NRDVLGGWSDSGSIFVADVVAKE 358
+ WR + + F +F +NW+ +K S N ++ SD S+ + DV + E
Sbjct: 123 -DKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGE 177
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 16/140 (11%)
Query: 197 FVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIA 256
FV +++ N G ++ + L +W+L +NG C ++ G D+L S I
Sbjct: 69 FVSDVALSNNGNFAVSASWDHSLRLWNL---QNGQCQYKFLGHTKDVLSVAFSPDNRQIV 125
Query: 257 VAGADRTVTIYDPRR--WSALSR-----WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVF 309
G D + +++ + LSR WV C ++ S+D+ I G D V
Sbjct: 126 SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFS------PSLDAPVIVSGGWDNLVK 179
Query: 310 CGQWRESSKVFAFRGDSNWL 329
V +G +N++
Sbjct: 180 VWDLATGRLVTDLKGHTNYV 199
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 16/140 (11%)
Query: 197 FVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIA 256
FV +++ N G ++ + L +W+L +NG C ++ G D+L S I
Sbjct: 69 FVSDVALSNNGNFAVSASWDHSLRLWNL---QNGQCQYKFLGHTKDVLSVAFSPDNRQIV 125
Query: 257 VAGADRTVTIYDPRR--WSALSR-----WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVF 309
G D + +++ + LSR WV C ++ S+D+ I G D V
Sbjct: 126 SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFS------PSLDAPVIVSGGWDNLVK 179
Query: 310 CGQWRESSKVFAFRGDSNWL 329
V +G +N++
Sbjct: 180 VWDLATGRLVTDLKGHTNYV 199
>sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1
SV=1
Length = 919
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 104 DSSGYMV-LGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS 162
DSSG +V G+ DS+ + S +G+ +D L+ EG SGLCF+P +
Sbjct: 467 DSSGEIVSAGAQDSFEIFVWSM--QTGRLLDVLSGH---------EGPVSGLCFNPMKSI 515
Query: 163 MAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIW 222
+A+ S+ K++ ++D RT TL S V P G + T Q+T W
Sbjct: 516 LASA--SWDKTVRLWDMFDSWRTKETLTLTSDALAV-TFRP--DGAELAVATLNSQITFW 570
Query: 223 DLR-------------MKENGGCLHRICG---SVGDILYAVCSSSTGN-IAVAGADRTVT 265
D +K L +I + G +C S+ G I G + V
Sbjct: 571 DPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTLCYSADGQSILAGGMSKFVC 630
Query: 266 IYDPRRWSALSRW 278
+Y R + R+
Sbjct: 631 LYHVREQILVKRF 643
>sp|Q8S9F2|PCYAA_EUGGR Photoactivated adenylate cyclase subunit alpha OS=Euglena gracilis
GN=pacA PE=1 SV=1
Length = 1019
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 156 FSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLA--- 212
F P Q ++ +A+SF S++ Y +R Y ++ N +NL PV+ MLA
Sbjct: 569 FPPLQDVLSQLAKSFI-SLETYVPSTVVR------YLTAGNNPRNLQPVSVEVVMLATDI 621
Query: 213 -----VTEGCQLT-IWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTV 264
++E C LT +W + C IC G+++ + T GAD V
Sbjct: 622 CSFTPLSEKCSLTEVWTICNTFIDACTSAICNEGGEVIKLIGDCVTAYFPPTGADNAV 679
>sp|Q9C4Z6|GPLPB_ARATH Guanine nucleotide-binding protein subunit beta-like protein B
OS=Arabidopsis thaliana GN=RACK1B PE=2 SV=1
Length = 326
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 196 NFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNI 255
+FVQ++ + G L+ + +L +WDL E+ R G D+L S+ I
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLATGES---TRRFVGHTKDVLSVAFSTDNRQI 120
Query: 256 AVAGADRTVTIYD 268
A DRT+ +++
Sbjct: 121 VSASRDRTIKLWN 133
>sp|O24076|GBLP_MEDSA Guanine nucleotide-binding protein subunit beta-like protein
OS=Medicago sativa GN=GB1 PE=2 SV=1
Length = 325
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 196 NFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNI 255
+FVQ++ + G L+ + +L +WDL G R G D+L S I
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLNA---GTSARRFVGHTKDVLSVAFSIDNRQI 120
Query: 256 AVAGADRTVTI--------YDPRRWSALSRWVHCSKY 284
A DRT+ + Y + A S WV C ++
Sbjct: 121 VSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRF 157
>sp|Q39836|GBLP_SOYBN Guanine nucleotide-binding protein subunit beta-like protein
OS=Glycine max PE=2 SV=1
Length = 325
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 196 NFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNI 255
+FVQ++ + G L+ + +L +WDL G R G D+L S I
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDL---AAGTSARRFVGHTKDVLSVAFSIDNRQI 120
Query: 256 AVAGADRTVTI--------YDPRRWSALSRWVHCSKYEITGLSFSSIDSNY 298
A DRT+ + Y + A S WV C ++ + L + + +++
Sbjct: 121 VSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASW 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,212,001
Number of Sequences: 539616
Number of extensions: 5731952
Number of successful extensions: 11364
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 11356
Number of HSP's gapped (non-prelim): 53
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)