Query 017601
Match_columns 369
No_of_seqs 440 out of 3027
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:04:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017601.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017601hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 5.9E-36 2E-40 276.6 32.8 260 88-367 28-289 (321)
2 3ow8_A WD repeat-containing pr 100.0 8.4E-36 2.9E-40 275.6 33.3 244 87-355 75-320 (321)
3 4gqb_B Methylosome protein 50; 100.0 2.3E-35 7.9E-40 275.4 36.4 248 89-358 79-333 (344)
4 1vyh_C Platelet-activating fac 100.0 6.7E-36 2.3E-40 285.4 31.3 277 51-355 109-410 (410)
5 2ynn_A Coatomer subunit beta'; 100.0 1.3E-35 4.3E-40 272.0 31.6 250 88-359 9-262 (304)
6 1vyh_C Platelet-activating fac 100.0 1.4E-35 4.8E-40 283.2 32.1 255 86-368 102-380 (410)
7 4g56_B MGC81050 protein; prote 100.0 1.2E-34 4.2E-39 271.7 33.8 250 88-359 90-346 (357)
8 1got_B GT-beta; complex (GTP-b 100.0 1.3E-34 4.4E-39 269.4 33.2 255 87-368 50-312 (340)
9 3frx_A Guanine nucleotide-bind 100.0 7.1E-34 2.4E-38 262.2 32.9 251 87-357 12-318 (319)
10 2pbi_B Guanine nucleotide-bind 100.0 1E-33 3.4E-38 265.1 34.0 254 87-368 59-326 (354)
11 1got_B GT-beta; complex (GTP-b 100.0 7.1E-34 2.4E-38 264.5 32.0 280 52-353 57-340 (340)
12 4ery_A WD repeat-containing pr 100.0 1.1E-33 3.8E-38 259.2 32.5 259 85-368 16-279 (312)
13 3iz6_a 40S ribosomal protein R 100.0 2.7E-34 9.2E-39 271.4 28.7 291 51-358 67-377 (380)
14 4gqb_B Methylosome protein 50; 100.0 8.2E-34 2.8E-38 264.9 31.3 262 88-368 26-299 (344)
15 2pbi_B Guanine nucleotide-bind 100.0 7.3E-33 2.5E-37 259.3 34.1 283 51-353 65-354 (354)
16 1nr0_A Actin interacting prote 100.0 1.3E-33 4.4E-38 283.1 30.8 248 88-359 55-358 (611)
17 2ynn_A Coatomer subunit beta'; 100.0 1.4E-32 4.7E-37 251.8 34.1 281 51-356 14-302 (304)
18 1erj_A Transcriptional repress 100.0 8.3E-33 2.8E-37 262.4 33.5 258 88-368 60-352 (393)
19 1erj_A Transcriptional repress 100.0 4.5E-33 1.6E-37 264.2 29.5 242 91-357 122-390 (393)
20 3iz6_a 40S ribosomal protein R 100.0 2.4E-33 8.2E-38 264.9 27.0 248 88-359 62-332 (380)
21 2xyi_A Probable histone-bindin 100.0 3.9E-32 1.3E-36 260.8 34.4 311 25-357 63-411 (430)
22 4g56_B MGC81050 protein; prote 100.0 5.9E-33 2E-37 260.2 27.8 250 89-359 39-304 (357)
23 2hes_X YDR267CP; beta-propelle 100.0 3E-32 1E-36 252.5 30.4 250 88-358 10-282 (330)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 4E-32 1.4E-36 253.2 30.2 252 88-358 11-285 (345)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.7E-32 1.6E-36 252.8 29.9 251 88-359 57-338 (345)
26 2pm7_B Protein transport prote 100.0 5.7E-32 2E-36 246.8 29.8 251 88-356 5-285 (297)
27 4aow_A Guanine nucleotide-bind 100.0 3.3E-31 1.1E-35 244.4 34.3 253 87-358 33-288 (340)
28 2hes_X YDR267CP; beta-propelle 100.0 1E-31 3.5E-36 248.9 30.6 248 90-356 56-328 (330)
29 1nr0_A Actin interacting prote 100.0 1.1E-31 3.7E-36 269.1 31.6 286 46-358 55-399 (611)
30 4ery_A WD repeat-containing pr 100.0 4.9E-31 1.7E-35 241.6 32.1 245 88-355 61-311 (312)
31 3bg1_A Protein SEC13 homolog; 100.0 4E-32 1.4E-36 250.2 23.1 252 88-356 9-293 (316)
32 3dm0_A Maltose-binding peripla 100.0 3.3E-31 1.1E-35 269.3 29.6 250 88-358 378-634 (694)
33 2xzm_R RACK1; ribosome, transl 100.0 6.3E-31 2.2E-35 244.7 28.7 247 87-358 71-342 (343)
34 1gxr_A ESG1, transducin-like e 100.0 6.2E-30 2.1E-34 235.1 35.0 252 85-359 44-299 (337)
35 4e54_B DNA damage-binding prot 100.0 2.2E-31 7.4E-36 255.9 26.2 249 89-359 116-390 (435)
36 2ymu_A WD-40 repeat protein; u 100.0 2.1E-30 7.3E-35 256.7 33.4 235 88-353 340-577 (577)
37 1sq9_A Antiviral protein SKI8; 100.0 2.4E-30 8.3E-35 244.1 31.5 260 88-358 58-397 (397)
38 2xzm_R RACK1; ribosome, transl 100.0 1.1E-29 3.7E-34 236.4 34.4 248 88-358 17-287 (343)
39 3gre_A Serine/threonine-protei 100.0 2.5E-31 8.7E-36 254.7 23.1 258 89-366 60-368 (437)
40 4aow_A Guanine nucleotide-bind 100.0 7.6E-30 2.6E-34 235.3 32.0 283 51-358 39-339 (340)
41 1gxr_A ESG1, transducin-like e 100.0 2.1E-29 7.2E-34 231.6 34.8 242 89-355 94-336 (337)
42 2pm9_A Protein WEB1, protein t 100.0 1.2E-30 4.1E-35 247.5 26.9 257 85-359 60-340 (416)
43 4a11_B DNA excision repair pro 100.0 2.1E-29 7.2E-34 237.7 35.2 260 88-359 39-368 (408)
44 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-30 1.1E-34 237.2 28.1 251 88-358 7-339 (351)
45 3k26_A Polycomb protein EED; W 100.0 3E-30 1E-34 239.9 28.0 245 90-356 67-366 (366)
46 2pm9_A Protein WEB1, protein t 100.0 5.1E-31 1.7E-35 250.1 22.9 294 50-357 67-415 (416)
47 3dm0_A Maltose-binding peripla 100.0 3.8E-30 1.3E-34 261.5 30.6 244 87-355 425-692 (694)
48 3v7d_B Cell division control p 100.0 2.6E-29 8.8E-34 242.6 33.5 262 68-360 139-425 (464)
49 3dw8_B Serine/threonine-protei 100.0 5.1E-30 1.7E-34 245.7 28.4 257 88-359 24-376 (447)
50 3i2n_A WD repeat-containing pr 100.0 3.8E-30 1.3E-34 238.6 26.6 252 88-358 61-355 (357)
51 2ymu_A WD-40 repeat protein; u 100.0 5.7E-29 1.9E-33 246.4 35.3 248 88-368 299-549 (577)
52 3ei3_B DNA damage-binding prot 100.0 2E-29 6.9E-34 237.3 29.4 244 88-356 114-382 (383)
53 3ei3_B DNA damage-binding prot 100.0 7.7E-30 2.6E-34 240.2 26.4 254 88-366 69-348 (383)
54 4h5i_A Guanine nucleotide-exch 100.0 4.5E-29 1.5E-33 234.6 31.4 261 86-358 67-345 (365)
55 3k26_A Polycomb protein EED; W 100.0 1.9E-29 6.4E-34 234.6 27.5 256 88-359 14-321 (366)
56 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-30 9.4E-35 253.7 22.7 256 88-357 203-518 (524)
57 3zwl_B Eukaryotic translation 100.0 1.3E-28 4.6E-33 228.8 32.9 258 84-367 24-314 (369)
58 1k8k_C P40, ARP2/3 complex 41 100.0 4.4E-30 1.5E-34 239.8 22.8 257 88-365 48-370 (372)
59 3zwl_B Eukaryotic translation 100.0 2.7E-28 9.1E-33 226.8 33.3 280 52-358 34-348 (369)
60 3dwl_C Actin-related protein 2 100.0 3.5E-30 1.2E-34 241.7 20.7 244 90-355 9-280 (377)
61 3jrp_A Fusion protein of prote 100.0 2.6E-29 9E-34 234.7 26.3 250 88-357 7-288 (379)
62 3vl1_A 26S proteasome regulato 100.0 2.8E-29 9.7E-34 238.7 26.4 249 93-366 57-332 (420)
63 3odt_A Protein DOA1; ubiquitin 100.0 3.6E-28 1.2E-32 221.1 32.7 244 88-359 55-299 (313)
64 1r5m_A SIR4-interacting protei 100.0 4.2E-29 1.4E-33 236.7 27.5 238 90-358 106-363 (425)
65 1k8k_C P40, ARP2/3 complex 41 100.0 5.8E-29 2E-33 232.2 27.9 246 90-356 6-274 (372)
66 3vl1_A 26S proteasome regulato 100.0 2.4E-29 8.2E-34 239.2 25.7 239 93-357 98-366 (420)
67 1r5m_A SIR4-interacting protei 100.0 6.8E-29 2.3E-33 235.2 28.0 279 52-355 110-424 (425)
68 4aez_A CDC20, WD repeat-contai 100.0 1.8E-28 6.3E-33 232.8 30.4 244 88-359 130-383 (401)
69 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-29 4E-34 249.2 22.1 252 90-357 131-429 (524)
70 4gga_A P55CDC, cell division c 100.0 3.3E-28 1.1E-32 232.6 31.2 247 86-357 141-396 (420)
71 3frx_A Guanine nucleotide-bind 100.0 2.6E-28 8.9E-33 224.9 28.4 200 150-359 19-230 (319)
72 3i2n_A WD repeat-containing pr 100.0 1E-28 3.5E-33 229.0 25.3 252 88-358 14-293 (357)
73 4e54_B DNA damage-binding prot 100.0 5.7E-29 1.9E-33 239.0 23.4 288 50-359 119-433 (435)
74 3v7d_B Cell division control p 100.0 5.9E-28 2E-32 233.1 30.1 246 87-359 116-384 (464)
75 3dwl_C Actin-related protein 2 100.0 3.8E-29 1.3E-33 234.6 20.9 206 87-314 50-280 (377)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-28 1.2E-32 230.6 26.2 246 93-359 35-302 (402)
77 1yfq_A Cell cycle arrest prote 100.0 7.4E-28 2.5E-32 222.3 26.9 254 89-367 8-292 (342)
78 1sq9_A Antiviral protein SKI8; 100.0 2.8E-28 9.5E-33 230.0 24.5 260 88-365 12-330 (397)
79 4ggc_A P55CDC, cell division c 100.0 1.2E-26 4.2E-31 211.7 33.8 247 86-357 61-316 (318)
80 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-28 1.4E-32 232.9 24.9 236 87-359 168-417 (435)
81 3gre_A Serine/threonine-protei 100.0 1.3E-28 4.5E-33 235.8 20.5 285 51-353 64-437 (437)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.3E-27 2.8E-31 224.2 32.1 254 68-359 136-394 (445)
83 3odt_A Protein DOA1; ubiquitin 100.0 3.6E-27 1.2E-31 214.5 28.0 237 87-359 13-258 (313)
84 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-27 3.8E-32 222.6 24.9 225 108-358 48-294 (343)
85 4aez_A CDC20, WD repeat-contai 100.0 5.2E-27 1.8E-31 222.8 29.8 247 86-358 85-338 (401)
86 3mkq_A Coatomer beta'-subunit; 100.0 2.1E-27 7.1E-32 244.6 29.1 249 88-358 9-261 (814)
87 1p22_A F-BOX/WD-repeat protein 100.0 5E-27 1.7E-31 225.3 29.5 237 88-358 129-367 (435)
88 1pgu_A Actin interacting prote 100.0 3.5E-27 1.2E-31 234.6 29.1 255 88-367 59-338 (615)
89 1yfq_A Cell cycle arrest prote 100.0 3.5E-27 1.2E-31 217.8 25.6 240 88-353 52-321 (342)
90 3sfz_A APAF-1, apoptotic pepti 100.0 9.4E-27 3.2E-31 250.5 32.8 246 86-356 609-913 (1249)
91 2pm7_B Protein transport prote 100.0 6E-27 2.1E-31 213.5 26.6 215 87-315 48-285 (297)
92 4h5i_A Guanine nucleotide-exch 100.0 2.7E-27 9.2E-32 222.4 24.6 204 90-315 131-343 (365)
93 3jro_A Fusion protein of prote 100.0 1.1E-27 3.7E-32 245.7 23.6 251 88-358 5-287 (753)
94 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-26 9.2E-31 221.2 31.9 197 150-354 104-337 (450)
95 4gga_A P55CDC, cell division c 100.0 6.7E-26 2.3E-30 216.5 34.1 248 95-368 108-364 (420)
96 3mmy_A MRNA export factor; mRN 100.0 4.8E-27 1.7E-31 218.2 25.0 250 88-355 35-345 (368)
97 3dw8_B Serine/threonine-protei 100.0 1.3E-26 4.5E-31 221.9 28.0 244 93-355 94-445 (447)
98 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-26 4.8E-31 249.2 30.9 292 50-367 615-1002(1249)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-26 1.3E-30 219.6 30.3 235 88-359 114-351 (445)
100 1pgu_A Actin interacting prote 100.0 3.1E-26 1E-30 227.8 30.4 246 89-359 15-286 (615)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-26 5.1E-31 219.5 24.5 251 88-358 77-344 (402)
102 2w18_A PALB2, fancn, partner a 100.0 4E-26 1.4E-30 208.6 25.6 183 162-354 146-355 (356)
103 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-25 5.2E-30 209.6 30.1 238 87-358 14-273 (355)
104 3bg1_A Protein SEC13 homolog; 100.0 1.1E-26 3.9E-31 213.6 22.0 215 87-315 52-293 (316)
105 3mkq_A Coatomer beta'-subunit; 99.9 7.2E-26 2.4E-30 233.1 30.3 247 88-358 51-304 (814)
106 4a11_B DNA excision repair pro 99.9 6.4E-26 2.2E-30 213.7 26.6 241 89-356 96-405 (408)
107 4ggc_A P55CDC, cell division c 99.9 2.3E-24 7.9E-29 196.5 33.2 248 95-368 28-284 (318)
108 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-25 5E-30 217.3 26.1 247 88-355 11-296 (588)
109 1l0q_A Surface layer protein; 99.9 2E-24 6.8E-29 203.4 31.6 242 91-359 30-278 (391)
110 2oaj_A Protein SNI1; WD40 repe 99.9 3.9E-25 1.3E-29 230.6 29.0 241 84-354 9-310 (902)
111 3vu4_A KMHSV2; beta-propeller 99.9 2.9E-25 9.8E-30 207.7 24.4 233 94-358 60-338 (355)
112 3jrp_A Fusion protein of prote 99.9 9.3E-25 3.2E-29 203.7 26.7 216 87-316 50-288 (379)
113 2oaj_A Protein SNI1; WD40 repe 99.9 3.9E-25 1.3E-29 230.6 25.6 196 150-359 19-245 (902)
114 3f3f_A Nucleoporin SEH1; struc 99.9 1.5E-24 5.2E-29 199.1 26.3 223 88-322 53-344 (351)
115 4gq1_A NUP37; propeller, trans 99.9 1E-25 3.5E-30 213.7 18.7 250 89-354 86-387 (393)
116 3bws_A Protein LP49; two-domai 99.9 3.5E-24 1.2E-28 204.5 29.1 241 88-355 165-431 (433)
117 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.7E-24 9.1E-29 207.3 27.8 246 89-356 99-391 (450)
118 3mmy_A MRNA export factor; mRN 99.9 9.2E-24 3.2E-28 195.9 27.3 207 149-367 40-314 (368)
119 2xyi_A Probable histone-bindin 99.9 9.1E-24 3.1E-28 202.5 26.9 210 87-315 176-410 (430)
120 4gq1_A NUP37; propeller, trans 99.9 2.4E-24 8.2E-29 204.2 21.9 201 154-360 94-352 (393)
121 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-23 4.6E-28 203.6 24.4 201 89-314 82-296 (588)
122 1l0q_A Surface layer protein; 99.9 5.1E-22 1.7E-26 186.9 32.4 225 109-359 3-236 (391)
123 3bws_A Protein LP49; two-domai 99.9 1.7E-22 5.8E-27 192.8 27.9 245 90-359 120-393 (433)
124 3lrv_A PRE-mRNA-splicing facto 99.9 1E-22 3.5E-27 189.0 24.7 187 160-359 47-247 (343)
125 3jro_A Fusion protein of prote 99.9 7.5E-23 2.6E-27 209.8 24.4 204 149-358 10-240 (753)
126 2w18_A PALB2, fancn, partner a 99.9 8.4E-23 2.9E-27 186.7 17.9 203 90-313 109-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.4E-19 1.8E-23 168.6 23.3 215 118-358 159-389 (415)
128 1nir_A Nitrite reductase; hemo 99.8 4.1E-18 1.4E-22 168.0 29.9 291 47-359 175-517 (543)
129 1pby_B Quinohemoprotein amine 99.8 1.4E-17 4.9E-22 152.4 30.1 226 109-359 2-313 (337)
130 1nir_A Nitrite reductase; hemo 99.8 1.6E-18 5.5E-23 170.9 24.6 241 95-360 181-462 (543)
131 1ri6_A Putative isomerase YBHE 99.8 1.4E-17 4.8E-22 152.9 29.3 253 88-358 33-312 (343)
132 2ojh_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 153.0 22.3 234 88-347 37-293 (297)
133 2hqs_A Protein TOLB; TOLB, PAL 99.8 9E-19 3.1E-23 167.1 18.8 244 91-359 61-347 (415)
134 2oit_A Nucleoporin 214KDA; NH2 99.8 3.5E-19 1.2E-23 171.0 15.9 196 153-358 41-280 (434)
135 3vgz_A Uncharacterized protein 99.8 5.3E-17 1.8E-21 149.9 29.8 241 90-359 38-306 (353)
136 1jmx_B Amine dehydrogenase; ox 99.8 3E-17 1E-21 151.2 25.9 235 98-359 5-328 (349)
137 3u4y_A Uncharacterized protein 99.8 1.7E-16 5.7E-21 145.6 29.0 227 108-359 10-255 (331)
138 3u4y_A Uncharacterized protein 99.8 7E-17 2.4E-21 148.1 26.3 241 92-358 40-306 (331)
139 3hfq_A Uncharacterized protein 99.8 1.3E-16 4.4E-21 147.7 26.9 250 89-358 36-321 (347)
140 2ecf_A Dipeptidyl peptidase IV 99.8 1.7E-17 5.9E-22 169.1 22.8 241 92-355 36-366 (741)
141 3o4h_A Acylamino-acid-releasin 99.8 2.2E-17 7.4E-22 164.0 21.9 229 92-354 21-274 (582)
142 2oit_A Nucleoporin 214KDA; NH2 99.8 2.5E-17 8.5E-22 158.0 21.2 211 92-316 36-279 (434)
143 3vgz_A Uncharacterized protein 99.8 9.1E-16 3.1E-20 141.6 31.1 237 91-346 87-334 (353)
144 1ri6_A Putative isomerase YBHE 99.8 4E-16 1.4E-20 143.1 26.2 232 109-355 6-261 (343)
145 1xfd_A DIP, dipeptidyl aminope 99.8 5.8E-17 2E-21 164.7 21.8 240 93-354 17-342 (723)
146 2z3z_A Dipeptidyl aminopeptida 99.7 1.6E-15 5.5E-20 153.8 29.4 249 89-358 117-437 (706)
147 2ojh_A Uncharacterized protein 99.7 2.9E-16 1E-20 140.4 21.0 224 113-359 17-261 (297)
148 2ecf_A Dipeptidyl peptidase IV 99.7 2.2E-16 7.5E-21 160.9 22.5 239 93-356 109-413 (741)
149 3o4h_A Acylamino-acid-releasin 99.7 2.4E-16 8.2E-21 156.5 22.1 231 89-356 60-315 (582)
150 1xfd_A DIP, dipeptidyl aminope 99.7 2.9E-16 1E-20 159.5 22.2 241 94-357 62-394 (723)
151 3scy_A Hypothetical bacterial 99.7 7.2E-15 2.5E-19 136.7 29.7 250 91-358 48-341 (361)
152 1k32_A Tricorn protease; prote 99.7 1.6E-15 5.5E-20 160.7 26.6 239 89-358 200-463 (1045)
153 2z3z_A Dipeptidyl aminopeptida 99.7 1.2E-15 4E-20 154.8 23.0 190 150-355 83-341 (706)
154 1k32_A Tricorn protease; prote 99.7 1.7E-15 5.7E-20 160.6 23.9 235 94-356 246-502 (1045)
155 1pby_B Quinohemoprotein amine 99.7 6.5E-15 2.2E-19 134.6 22.6 207 94-325 35-320 (337)
156 1z68_A Fibroblast activation p 99.6 2.6E-15 9E-20 152.6 17.3 236 97-358 20-348 (719)
157 1jmx_B Amine dehydrogenase; ox 99.6 1.5E-14 5.2E-19 133.0 20.1 208 94-325 44-335 (349)
158 1jof_A Carboxy-CIS,CIS-muconat 99.6 7.9E-14 2.7E-18 130.2 24.5 244 93-357 40-342 (365)
159 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-12 3.6E-17 117.9 31.1 245 90-357 27-281 (286)
160 3hfq_A Uncharacterized protein 99.6 5.7E-14 2E-18 129.8 23.1 219 89-319 82-323 (347)
161 4a5s_A Dipeptidyl peptidase 4 99.6 7E-14 2.4E-18 142.9 25.5 242 92-358 16-355 (740)
162 3azo_A Aminopeptidase; POP fam 99.6 1E-13 3.4E-18 139.5 22.8 251 88-358 19-327 (662)
163 3pe7_A Oligogalacturonate lyas 99.6 1.9E-13 6.5E-18 127.9 22.9 248 88-359 26-332 (388)
164 3fvz_A Peptidyl-glycine alpha- 99.6 7.6E-13 2.6E-17 121.8 26.1 237 93-357 24-323 (329)
165 1z68_A Fibroblast activation p 99.6 2.4E-14 8.1E-19 145.6 15.9 237 94-356 61-391 (719)
166 3scy_A Hypothetical bacterial 99.6 1.8E-12 6.2E-17 120.3 26.6 223 116-355 25-290 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.5 6.8E-12 2.3E-16 117.0 28.8 196 152-358 43-294 (365)
168 3c5m_A Oligogalacturonate lyas 99.5 5.3E-13 1.8E-17 124.9 21.0 245 91-359 34-332 (396)
169 3azo_A Aminopeptidase; POP fam 99.5 4.1E-12 1.4E-16 127.7 24.2 241 97-358 81-371 (662)
170 4a5s_A Dipeptidyl peptidase 4 99.4 3.2E-12 1.1E-16 130.6 19.0 192 153-358 21-296 (740)
171 3e5z_A Putative gluconolactona 99.4 1.5E-10 5.1E-15 104.4 27.5 239 91-358 26-288 (296)
172 3fvz_A Peptidyl-glycine alpha- 99.4 2.2E-11 7.7E-16 111.9 22.3 207 90-315 88-322 (329)
173 3dsm_A Uncharacterized protein 99.4 1.2E-10 4E-15 107.1 25.5 231 93-358 44-303 (328)
174 1rwi_B Serine/threonine-protei 99.4 7.3E-11 2.5E-15 104.5 23.2 236 94-358 25-266 (270)
175 2oiz_A Aromatic amine dehydrog 99.4 8.2E-11 2.8E-15 109.7 24.4 240 97-357 54-335 (361)
176 1q7f_A NHL, brain tumor CG1071 99.4 1.9E-10 6.4E-15 103.1 25.0 188 152-355 33-237 (286)
177 2xdw_A Prolyl endopeptidase; a 99.4 6.2E-11 2.1E-15 120.4 24.0 243 90-358 122-416 (710)
178 3pe7_A Oligogalacturonate lyas 99.4 6.1E-11 2.1E-15 110.8 20.5 242 90-355 78-381 (388)
179 3no2_A Uncharacterized protein 99.3 2.6E-10 8.9E-15 102.3 22.2 181 162-359 6-198 (276)
180 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.6E-09 5.6E-14 97.9 27.4 243 93-358 18-301 (314)
181 2bkl_A Prolyl endopeptidase; m 99.3 1.4E-10 4.7E-15 117.6 22.3 244 90-359 118-400 (695)
182 2dg1_A DRP35, lactonase; beta 99.3 8.3E-09 2.8E-13 94.3 29.4 240 89-356 41-316 (333)
183 2z2n_A Virginiamycin B lyase; 99.3 1.9E-08 6.5E-13 89.8 30.8 236 90-354 12-253 (299)
184 3c5m_A Oligogalacturonate lyas 99.3 4.2E-10 1.5E-14 105.0 19.9 236 96-361 84-389 (396)
185 3no2_A Uncharacterized protein 99.2 2.5E-09 8.6E-14 95.8 23.8 212 108-344 5-231 (276)
186 2z2n_A Virginiamycin B lyase; 99.2 4.6E-08 1.6E-12 87.3 31.9 236 92-358 56-297 (299)
187 2gop_A Trilobed protease; beta 99.2 5.6E-09 1.9E-13 95.8 25.1 221 93-355 59-330 (347)
188 2oiz_A Aromatic amine dehydrog 99.2 1.3E-09 4.6E-14 101.5 20.9 205 93-323 108-344 (361)
189 3e5z_A Putative gluconolactona 99.2 1.5E-09 5.3E-14 97.7 18.7 188 153-355 32-245 (296)
190 1qks_A Cytochrome CD1 nitrite 99.2 2.3E-08 8E-13 98.5 28.3 228 108-357 167-422 (567)
191 3dsm_A Uncharacterized protein 99.2 7.3E-09 2.5E-13 95.1 22.7 186 153-359 48-256 (328)
192 1xip_A Nucleoporin NUP159; bet 99.2 4.5E-10 1.5E-14 105.1 14.4 182 94-303 39-232 (388)
193 1yr2_A Prolyl oligopeptidase; 99.2 2E-09 6.8E-14 109.9 20.4 243 90-359 160-444 (741)
194 2dg1_A DRP35, lactonase; beta 99.1 1.4E-09 4.9E-14 99.4 17.1 191 151-356 8-213 (333)
195 2xdw_A Prolyl endopeptidase; a 99.1 1.1E-08 3.9E-13 103.7 25.3 197 151-358 127-370 (710)
196 1rwi_B Serine/threonine-protei 99.1 7.2E-09 2.5E-13 91.5 21.1 193 152-358 27-224 (270)
197 1xip_A Nucleoporin NUP159; bet 99.1 6.1E-09 2.1E-13 97.4 17.7 168 152-342 41-230 (388)
198 2mad_H Methylamine dehydrogena 99.1 4.3E-07 1.5E-11 84.9 30.2 243 97-360 70-354 (373)
199 1qks_A Cytochrome CD1 nitrite 99.1 5.7E-08 2E-12 95.8 25.3 186 163-359 168-376 (567)
200 3hrp_A Uncharacterized protein 99.0 1.3E-07 4.5E-12 89.5 26.1 230 93-354 131-408 (409)
201 2qc5_A Streptogramin B lactona 99.0 9.3E-07 3.2E-11 78.7 30.5 236 91-354 18-258 (300)
202 2gop_A Trilobed protease; beta 99.0 3.9E-08 1.3E-12 90.1 21.7 160 171-353 42-250 (347)
203 2bkl_A Prolyl endopeptidase; m 99.0 1.2E-08 4.1E-13 103.3 19.9 192 151-355 123-348 (695)
204 2qc5_A Streptogramin B lactona 99.0 1.1E-06 3.7E-11 78.3 30.0 232 92-354 61-298 (300)
205 3g4e_A Regucalcin; six bladed 99.0 3.4E-07 1.2E-11 82.5 26.1 223 96-343 16-259 (297)
206 3iuj_A Prolyl endopeptidase; h 99.0 3.9E-08 1.4E-12 99.5 20.7 240 91-359 127-408 (693)
207 3dr2_A Exported gluconolactona 98.9 4.9E-07 1.7E-11 81.7 24.9 230 92-349 44-300 (305)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 3.8E-07 1.3E-11 82.1 24.0 208 91-315 69-299 (314)
209 2hz6_A Endoplasmic reticulum t 98.9 3.2E-10 1.1E-14 106.0 3.5 180 162-359 10-195 (369)
210 3hrp_A Uncharacterized protein 98.9 4.6E-07 1.6E-11 85.8 23.3 192 152-358 134-356 (409)
211 1yr2_A Prolyl oligopeptidase; 98.9 2.4E-07 8.1E-12 94.5 22.4 192 151-355 165-392 (741)
212 3sjl_D Methylamine dehydrogena 98.9 4.4E-07 1.5E-11 84.6 22.3 255 98-369 83-377 (386)
213 3g4e_A Regucalcin; six bladed 98.9 5.9E-07 2E-11 80.9 22.6 192 153-358 17-231 (297)
214 2ghs_A AGR_C_1268P; regucalcin 98.9 4.4E-06 1.5E-10 76.3 28.3 220 95-346 51-293 (326)
215 3sjl_D Methylamine dehydrogena 98.8 2.2E-07 7.6E-12 86.6 17.6 143 205-356 42-208 (386)
216 2hz6_A Endoplasmic reticulum t 98.8 8.2E-10 2.8E-14 103.3 0.7 142 206-359 8-152 (369)
217 2ghs_A AGR_C_1268P; regucalcin 98.8 2.4E-06 8.1E-11 78.1 22.9 185 153-355 53-259 (326)
218 2mad_H Methylamine dehydrogena 98.7 6E-06 2.1E-10 77.0 24.0 202 95-322 127-357 (373)
219 3c75_H MADH, methylamine dehyd 98.7 4.6E-06 1.6E-10 78.9 22.8 195 153-359 122-405 (426)
220 3dr2_A Exported gluconolactona 98.7 2.2E-06 7.5E-11 77.4 19.2 185 153-355 49-266 (305)
221 2qe8_A Uncharacterized protein 98.6 2.9E-06 1E-10 78.0 19.2 137 216-358 92-280 (343)
222 3iuj_A Prolyl endopeptidase; h 98.6 4.6E-06 1.6E-10 84.3 21.7 196 150-358 130-361 (693)
223 2qe8_A Uncharacterized protein 98.6 2.7E-05 9.1E-10 71.5 24.2 236 93-349 17-314 (343)
224 2ece_A 462AA long hypothetical 98.5 4.6E-05 1.6E-09 71.9 24.4 191 154-356 87-352 (462)
225 3q7m_A Lipoprotein YFGL, BAMB; 98.5 4.9E-05 1.7E-09 70.4 24.7 177 163-353 190-375 (376)
226 3q7m_A Lipoprotein YFGL, BAMB; 98.5 3.4E-05 1.2E-09 71.5 22.9 223 110-359 105-340 (376)
227 1yiq_A Quinohemoprotein alcoho 98.5 1.8E-05 6.2E-10 79.8 22.5 138 218-359 276-508 (689)
228 1mda_H Methylamine dehydrogena 98.5 6.6E-06 2.3E-10 76.5 17.2 236 97-359 69-349 (368)
229 1kb0_A Quinohemoprotein alcoho 98.4 2E-05 6.8E-10 79.4 21.6 138 218-359 284-510 (677)
230 2iwa_A Glutamine cyclotransfer 98.4 9.2E-05 3.2E-09 65.3 21.3 206 84-316 10-238 (266)
231 3c75_H MADH, methylamine dehyd 98.4 1.5E-05 5E-10 75.5 17.1 129 217-355 99-247 (426)
232 2iwa_A Glutamine cyclotransfer 98.3 0.00016 5.5E-09 63.8 22.4 191 153-358 25-239 (266)
233 2ece_A 462AA long hypothetical 98.3 0.00029 9.8E-09 66.5 24.6 223 108-344 96-399 (462)
234 1kb0_A Quinohemoprotein alcoho 98.3 6.2E-05 2.1E-09 75.8 21.5 155 162-323 129-354 (677)
235 1npe_A Nidogen, entactin; glyc 98.3 0.00061 2.1E-08 59.7 24.3 193 152-359 39-241 (267)
236 2fp8_A Strictosidine synthase; 98.2 0.0003 1E-08 63.7 21.6 196 151-358 82-315 (322)
237 1fwx_A Nitrous oxide reductase 98.1 0.00011 3.9E-09 71.6 18.1 135 218-358 255-433 (595)
238 1yiq_A Quinohemoprotein alcoho 98.1 0.00032 1.1E-08 70.7 22.1 152 162-320 122-343 (689)
239 3nok_A Glutaminyl cyclase; bet 98.1 0.00066 2.3E-08 59.4 20.6 188 85-302 45-253 (268)
240 3hxj_A Pyrrolo-quinoline quino 98.1 0.00081 2.8E-08 60.4 22.0 184 153-358 141-326 (330)
241 3nol_A Glutamine cyclotransfer 98.1 0.00095 3.2E-08 58.4 21.1 190 84-303 32-243 (262)
242 3hxj_A Pyrrolo-quinoline quino 98.0 0.00035 1.2E-08 62.8 18.7 176 163-358 109-285 (330)
243 1npe_A Nidogen, entactin; glyc 98.0 0.0033 1.1E-07 54.9 24.3 202 93-323 36-246 (267)
244 1fwx_A Nitrous oxide reductase 98.0 7.8E-05 2.7E-09 72.7 14.5 182 163-356 103-361 (595)
245 3nok_A Glutaminyl cyclase; bet 98.0 5E-05 1.7E-09 66.6 11.9 142 207-359 65-213 (268)
246 3mbr_X Glutamine cyclotransfer 98.0 0.0028 9.4E-08 54.9 22.7 190 84-303 10-222 (243)
247 3nol_A Glutamine cyclotransfer 98.0 0.0001 3.5E-09 64.5 13.3 142 207-359 53-204 (262)
248 1mda_H Methylamine dehydrogena 98.0 3.8E-05 1.3E-09 71.3 11.1 126 218-356 47-194 (368)
249 1kv9_A Type II quinohemoprotei 97.9 0.0011 3.6E-08 66.7 21.2 137 218-359 271-491 (668)
250 3mbr_X Glutamine cyclotransfer 97.8 0.00023 7.9E-09 61.7 12.9 142 208-359 32-182 (243)
251 2fp8_A Strictosidine synthase; 97.7 0.0045 1.5E-07 55.8 19.9 188 153-355 23-268 (322)
252 2ad6_A Methanol dehydrogenase 97.7 0.023 7.7E-07 55.8 26.0 136 218-359 273-497 (571)
253 3amr_A 3-phytase; beta-propell 97.7 0.015 5E-07 53.0 22.6 194 109-323 41-272 (355)
254 3v65_B Low-density lipoprotein 97.7 0.032 1.1E-06 51.8 25.5 203 93-323 116-326 (386)
255 3qqz_A Putative uncharacterize 97.6 0.026 8.9E-07 49.2 23.8 194 150-354 28-251 (255)
256 3p5b_L Low density lipoprotein 97.6 0.032 1.1E-06 52.1 25.3 196 151-359 114-323 (400)
257 3v65_B Low-density lipoprotein 97.6 0.031 1.1E-06 51.9 24.1 194 151-358 118-320 (386)
258 3v64_C Agrin; beta propeller, 97.6 0.037 1.3E-06 50.6 24.1 191 151-358 75-277 (349)
259 1ijq_A LDL receptor, low-densi 97.6 0.043 1.5E-06 49.3 25.4 192 152-358 33-240 (316)
260 1k3i_A Galactose oxidase precu 97.5 0.001 3.5E-08 66.6 14.3 194 153-358 247-499 (656)
261 2p4o_A Hypothetical protein; p 97.5 0.051 1.7E-06 48.4 24.0 186 153-355 36-241 (306)
262 1w6s_A Methanol dehydrogenase 97.4 0.076 2.6E-06 52.4 25.9 137 217-359 278-506 (599)
263 1w6s_A Methanol dehydrogenase 97.4 0.052 1.8E-06 53.5 24.3 152 164-323 124-350 (599)
264 2xe4_A Oligopeptidase B; hydro 97.4 0.013 4.3E-07 59.7 20.3 241 94-358 175-460 (751)
265 2ad6_A Methanol dehydrogenase 97.4 0.097 3.3E-06 51.3 25.9 153 163-323 117-343 (571)
266 3v64_C Agrin; beta propeller, 97.4 0.081 2.8E-06 48.3 26.9 201 94-322 74-282 (349)
267 1kv9_A Type II quinohemoprotei 97.3 0.012 4.3E-07 58.9 19.1 149 207-359 117-336 (668)
268 2xe4_A Oligopeptidase B; hydro 97.3 0.04 1.4E-06 55.9 22.9 193 152-354 177-398 (751)
269 3m0c_C LDL receptor, low-densi 97.3 0.1 3.4E-06 53.2 25.4 194 151-358 426-634 (791)
270 3sov_A LRP-6, low-density lipo 97.1 0.14 4.7E-06 46.1 23.7 194 152-359 38-241 (318)
271 3tc9_A Hypothetical hydrolase; 97.1 0.18 6.2E-06 47.4 26.0 151 95-270 139-300 (430)
272 1flg_A Protein (quinoprotein e 97.1 0.012 4.1E-07 57.9 16.1 137 217-359 291-519 (582)
273 1ijq_A LDL receptor, low-densi 97.0 0.17 5.9E-06 45.3 29.8 205 93-322 30-245 (316)
274 2p4o_A Hypothetical protein; p 96.9 0.21 7.1E-06 44.4 25.0 96 205-306 176-279 (306)
275 3amr_A 3-phytase; beta-propell 96.9 0.074 2.5E-06 48.4 17.7 142 205-355 38-209 (355)
276 1n7d_A LDL receptor, low-densi 96.9 0.007 2.4E-07 61.0 12.1 191 153-358 410-616 (699)
277 4hw6_A Hypothetical protein, I 96.8 0.33 1.1E-05 45.7 23.9 202 95-324 141-381 (433)
278 2p9w_A MAL S 1 allergenic prot 96.8 0.16 5.6E-06 45.7 18.9 153 153-316 17-216 (334)
279 3qqz_A Putative uncharacterize 96.7 0.26 9E-06 42.8 23.5 203 90-313 24-251 (255)
280 4a2l_A BT_4663, two-component 96.6 0.73 2.5E-05 46.8 30.9 189 150-358 358-573 (795)
281 4a2l_A BT_4663, two-component 96.6 0.73 2.5E-05 46.8 33.0 192 150-358 264-482 (795)
282 3tc9_A Hypothetical hydrolase; 96.6 0.073 2.5E-06 50.2 16.1 149 153-315 141-301 (430)
283 3p5b_L Low density lipoprotein 96.6 0.48 1.6E-05 44.0 28.2 206 93-322 112-327 (400)
284 4hw6_A Hypothetical protein, I 96.6 0.24 8.4E-06 46.6 19.6 149 153-314 143-303 (433)
285 1flg_A Protein (quinoprotein e 96.5 0.018 6.1E-07 56.7 11.8 63 261-326 465-527 (582)
286 3kya_A Putative phosphatase; s 96.3 0.38 1.3E-05 46.1 19.3 158 153-315 143-341 (496)
287 2p9w_A MAL S 1 allergenic prot 96.3 0.47 1.6E-05 42.8 18.6 156 191-356 14-215 (334)
288 3sov_A LRP-6, low-density lipo 96.3 0.6 2E-05 41.9 24.5 203 93-322 35-245 (318)
289 3m0c_C LDL receptor, low-densi 96.2 1.2 4.3E-05 45.2 27.0 207 93-322 424-639 (791)
290 1n7d_A LDL receptor, low-densi 96.2 0.063 2.2E-06 54.0 14.1 204 94-322 407-621 (699)
291 3sre_A PON1, serum paraoxonase 96.0 0.85 2.9E-05 41.6 20.7 168 170-346 81-287 (355)
292 2ism_A Putative oxidoreductase 95.9 0.94 3.2E-05 41.1 24.9 73 95-180 33-113 (352)
293 3kya_A Putative phosphatase; s 95.9 1.2 4.2E-05 42.5 26.5 210 95-324 141-417 (496)
294 3v9f_A Two-component system se 95.9 1.7 5.9E-05 43.9 30.1 192 150-358 314-526 (781)
295 3v9f_A Two-component system se 95.8 1.9 6.6E-05 43.5 26.7 193 150-358 364-570 (781)
296 3sre_A PON1, serum paraoxonase 95.8 0.85 2.9E-05 41.6 18.2 70 242-314 221-297 (355)
297 1k3i_A Galactose oxidase precu 95.6 0.084 2.9E-06 52.6 11.7 112 246-358 190-325 (656)
298 3pbp_A Nucleoporin NUP82; beta 95.6 0.74 2.5E-05 43.0 16.9 102 207-311 76-208 (452)
299 2xbg_A YCF48-like protein; pho 95.4 1.4 4.8E-05 39.4 22.3 193 91-312 120-319 (327)
300 3s94_A LRP-6, low-density lipo 95.4 1.9 6.5E-05 42.5 20.6 191 152-359 43-246 (619)
301 3s94_A LRP-6, low-density lipo 94.8 3.3 0.00011 40.7 21.1 197 93-316 40-244 (619)
302 2xbg_A YCF48-like protein; pho 94.5 2.5 8.4E-05 37.8 29.2 187 151-354 124-320 (327)
303 4a0p_A LRP6, LRP-6, low-densit 94.4 4.4 0.00015 40.0 26.0 193 151-359 39-240 (628)
304 3a9g_A Putative uncharacterize 94.3 2.9 0.0001 37.9 24.0 60 284-344 259-330 (354)
305 2xn4_A Kelch-like protein 2; s 94.3 1.2 4.1E-05 39.0 14.5 141 207-358 109-278 (302)
306 4a0p_A LRP6, LRP-6, low-densit 94.2 4.6 0.00016 39.8 29.6 195 93-317 37-239 (628)
307 2vpj_A Kelch-like protein 12; 93.7 2.7 9.2E-05 36.6 15.8 133 217-358 128-280 (301)
308 3ii7_A Kelch-like protein 7; p 93.7 1.6 5.5E-05 38.2 14.2 180 160-358 55-274 (306)
309 2be1_A Serine/threonine-protei 92.7 0.55 1.9E-05 42.5 9.5 190 162-359 11-234 (339)
310 3ii7_A Kelch-like protein 7; p 92.7 2.7 9.1E-05 36.8 14.0 180 161-358 12-227 (306)
311 2vpj_A Kelch-like protein 12; 92.5 3.8 0.00013 35.7 14.8 135 217-358 78-233 (301)
312 2xn4_A Kelch-like protein 2; s 92.0 3.5 0.00012 35.9 13.9 134 217-358 77-231 (302)
313 3pbp_A Nucleoporin NUP82; beta 91.6 3.5 0.00012 38.5 13.4 97 214-315 38-158 (452)
314 2uvk_A YJHT; unknown function, 91.5 7.4 0.00025 34.7 17.0 137 217-359 168-345 (357)
315 3a9g_A Putative uncharacterize 91.4 7.7 0.00026 35.0 15.8 102 191-303 30-153 (354)
316 4asc_A Kelch repeat and BTB do 91.4 4.2 0.00014 35.7 13.8 133 217-358 117-279 (315)
317 1zgk_A Kelch-like ECH-associat 90.9 3.4 0.00012 36.2 12.7 131 217-358 137-289 (308)
318 1tl2_A L10, protein (tachylect 90.6 4.3 0.00015 34.3 11.9 136 208-353 5-160 (236)
319 2ism_A Putative oxidoreductase 90.4 8.7 0.0003 34.6 15.1 101 191-303 32-153 (352)
320 2woz_A Kelch repeat and BTB do 90.3 8.7 0.0003 33.7 14.9 103 251-358 157-289 (318)
321 2xzh_A Clathrin heavy chain 1; 90.2 10 0.00034 34.2 25.1 194 153-359 71-293 (365)
322 1zgk_A Kelch-like ECH-associat 90.0 3.9 0.00013 35.9 12.2 133 217-358 90-242 (308)
323 4asc_A Kelch repeat and BTB do 89.0 11 0.00038 32.9 16.4 182 162-358 6-223 (315)
324 1xi4_A Clathrin heavy chain; a 87.8 28 0.00095 37.8 18.0 192 154-359 71-292 (1630)
325 3ei3_A DNA damage-binding prot 86.8 35 0.0012 36.2 24.1 134 216-356 863-999 (1158)
326 3sbq_A Nitrous-oxide reductase 86.2 8 0.00027 37.4 11.9 122 218-344 299-453 (638)
327 2woz_A Kelch repeat and BTB do 84.2 21 0.0007 31.2 14.9 102 252-358 109-233 (318)
328 2be1_A Serine/threonine-protei 84.0 1.6 5.5E-05 39.5 5.9 107 253-359 11-133 (339)
329 1bpo_A Protein (clathrin); cla 82.2 33 0.0011 32.1 26.7 194 153-359 70-292 (494)
330 2g8s_A Glucose/sorbosone dehyd 81.9 28 0.00097 31.1 25.7 58 285-342 272-339 (353)
331 1tl2_A L10, protein (tachylect 78.8 5.7 0.0002 33.5 7.0 97 207-309 51-157 (236)
332 2zwa_A Leucine carboxyl methyl 78.7 22 0.00077 35.3 12.7 138 217-358 468-637 (695)
333 1cru_A Protein (soluble quinop 77.1 48 0.0016 31.0 17.9 66 94-167 28-98 (454)
334 3das_A Putative oxidoreductase 75.5 46 0.0016 29.9 24.3 59 93-159 32-90 (347)
335 3sbq_A Nitrous-oxide reductase 75.2 46 0.0016 32.3 12.8 100 204-308 331-461 (638)
336 2g8s_A Glucose/sorbosone dehyd 75.0 46 0.0016 29.7 14.2 107 189-304 17-149 (353)
337 3ei3_A DNA damage-binding prot 74.3 94 0.0032 33.0 30.0 132 218-354 493-634 (1158)
338 4gq2_M Nucleoporin NUP120; bet 73.3 23 0.0008 36.7 11.5 37 285-322 237-273 (950)
339 3s25_A Hypothetical 7-bladed b 70.0 56 0.0019 28.5 16.3 133 205-356 62-216 (302)
340 3das_A Putative oxidoreductase 69.1 65 0.0022 28.9 15.3 101 242-344 32-158 (347)
341 4gq2_M Nucleoporin NUP120; bet 68.3 20 0.00069 37.2 9.6 73 242-314 236-316 (950)
342 2zwa_A Leucine carboxyl methyl 67.7 99 0.0034 30.6 14.3 133 217-358 412-579 (695)
343 3zwu_A Alkaline phosphatase PH 64.9 19 0.00065 35.1 8.1 57 245-302 479-548 (592)
344 4a9v_A PHOX; hydrolase, beta-p 62.5 35 0.0012 33.1 9.2 61 242-303 476-549 (592)
345 2xzh_A Clathrin heavy chain 1; 61.4 93 0.0032 28.0 21.1 139 208-356 78-236 (365)
346 1cru_A Protein (soluble quinop 58.8 1.2E+02 0.004 28.3 17.6 95 208-304 38-163 (454)
347 3ott_A Two-component system se 55.4 1.6E+02 0.0056 29.0 18.1 143 208-358 384-547 (758)
348 4fhn_B Nucleoporin NUP120; pro 51.4 12 0.00043 39.6 4.6 37 285-322 239-275 (1139)
349 2uvk_A YJHT; unknown function, 49.1 1.3E+02 0.0046 26.1 15.4 55 263-321 286-348 (357)
350 3f7f_A Nucleoporin NUP120; nuc 45.8 34 0.0012 34.1 6.3 70 286-358 224-307 (729)
351 3ott_A Two-component system se 38.8 2.9E+02 0.01 27.1 27.4 140 208-357 113-261 (758)
352 3b7f_A Glycosyl hydrolase, BNR 38.7 2.1E+02 0.0072 25.4 12.7 102 207-311 22-143 (394)
353 4fhn_B Nucleoporin NUP120; pro 35.9 21 0.00073 37.8 3.4 36 243-278 239-275 (1139)
354 3f7f_A Nucleoporin NUP120; nuc 35.3 35 0.0012 34.0 4.6 29 207-238 231-259 (729)
355 1bpo_A Protein (clathrin); cla 34.9 2.9E+02 0.01 25.9 22.7 195 110-315 118-331 (494)
356 3qhy_B Beta-lactamase inhibito 34.2 2.2E+02 0.0075 24.3 12.1 131 207-352 33-164 (282)
357 2wg3_C Hedgehog-interacting pr 29.7 3.4E+02 0.012 25.1 15.0 108 189-306 13-160 (463)
358 3no0_A DNA gyrase subunit A; D 27.5 2.9E+02 0.0098 23.5 16.6 144 207-356 80-246 (276)
359 2wg3_C Hedgehog-interacting pr 27.2 3.8E+02 0.013 24.8 15.8 104 242-347 14-160 (463)
360 1sqj_A OXG-RCBH, oligoxylogluc 22.0 6E+02 0.02 25.3 11.8 156 151-310 17-196 (789)
361 3no0_A DNA gyrase subunit A; D 22.0 3.7E+02 0.013 22.8 14.3 100 254-356 82-196 (276)
362 1xi4_A Clathrin heavy chain; a 21.1 8.5E+02 0.029 26.8 17.5 69 245-315 262-331 (1630)
363 3uc1_A DNA gyrase subunit A; D 21.0 4.2E+02 0.014 23.2 17.0 144 207-355 109-278 (327)
364 4a9v_A PHOX; hydrolase, beta-p 20.7 3.3E+02 0.011 26.3 8.3 38 218-258 510-548 (592)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=276.61 Aligned_cols=260 Identities=15% Similarity=0.127 Sum_probs=203.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|.+.|++++|+|++..+..++++++.++.|++|++..... ...+.+..|. .++.+++|+|+ ..+++++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~---~~~~~l~gh~-----~~v~~~~~~~~-~~~l~s~ 98 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL---DLQWSLEGHQ-----LGVVSVDISHT-LPIAASS 98 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE---EEEEEECCCS-----SCEEEEEECSS-SSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe---eeeeeeccCC-----CCEEEEEECCC-CCEEEEE
Confidence 4689999999999986433356899999999999999975411 1122333333 34678999995 4577877
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|++|++||............++..+..+. ++|++..|++++.|++|++||++++ +....+..+ ...|.++
T Consensus 99 -s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~---~spdg~~l~~g~~dg~v~i~~~~~~---~~~~~~~~~-~~~v~~~ 170 (321)
T 3ow8_A 99 -SLDAHIRLWDLENGKQIKSIDAGPVDAWTLA---FSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTR-GKFILSI 170 (321)
T ss_dssp -ETTSEEEEEETTTTEEEEEEECCTTCCCCEE---ECTTSSEEEEECTTSEEEEEETTTC---SEEEEEECS-SSCEEEE
T ss_pred -eCCCcEEEEECCCCCEEEEEeCCCccEEEEE---ECCCCCEEEEEcCCCcEEEEEcCCC---ceeEEecCC-CceEEEE
Confidence 8999999999864332222222333332333 2356778889999999999999988 677777665 6789999
Q ss_pred EECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC
Q 017601 248 CSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS 326 (369)
Q Consensus 248 ~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~ 326 (369)
+|+|++ +|++|+.|++|++||+++++.+.++.+| ...|++++|+| ++++|++++.|++|++||++++++...+.+|.
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~ 248 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH-AMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 248 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCS
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc-CCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCC
Confidence 999999 9999999999999999999999999999 99999999999 99999999999999999999999999999998
Q ss_pred Ce-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccC
Q 017601 327 NW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGL 367 (369)
Q Consensus 327 ~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~ 367 (369)
.+ ..+..++++.+|++++.|++|++||+.+++. +..+.+|
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~h 289 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC-VHTFFDH 289 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE-EEEEcCC
Confidence 43 3445577999999999999999999988763 4445444
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=275.57 Aligned_cols=244 Identities=15% Similarity=0.115 Sum_probs=199.7
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|...|.+++|++++ .++++++.++.|++||+.++. ....+..+.. .+..++|+|+ ...+++
T Consensus 75 ~l~gh~~~v~~~~~~~~~----~~l~s~s~D~~i~lWd~~~~~-----~~~~~~~~~~-----~~~~~~~spd-g~~l~~ 139 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTL----PIAASSSLDAHIRLWDLENGK-----QIKSIDAGPV-----DAWTLAFSPD-SQYLAT 139 (321)
T ss_dssp EECCCSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE-----EEEEEECCTT-----CCCCEEECTT-SSEEEE
T ss_pred eeccCCCCEEEEEECCCC----CEEEEEeCCCcEEEEECCCCC-----EEEEEeCCCc-----cEEEEEECCC-CCEEEE
Confidence 467999999999999973 689999999999999997551 1112222211 2336999994 557788
Q ss_pred EecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+ +.|+.|++||............+...+..+. ++|++..|++++.|++|++||++++ +.+..+..+ ..+|++
T Consensus 140 g-~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~---~spdg~~lasg~~dg~i~iwd~~~~---~~~~~~~~h-~~~v~~ 211 (321)
T 3ow8_A 140 G-THVGKVNIFGVESGKKEYSLDTRGKFILSIA---YSPDGKYLASGAIDGIINIFDIATG---KLLHTLEGH-AMPIRS 211 (321)
T ss_dssp E-CTTSEEEEEETTTCSEEEEEECSSSCEEEEE---ECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCC-SSCCCE
T ss_pred E-cCCCcEEEEEcCCCceeEEecCCCceEEEEE---ECCCCCEEEEEcCCCeEEEEECCCC---cEEEEEccc-CCceeE
Confidence 7 8999999999864433333333434444444 3456778999999999999999988 788888876 689999
Q ss_pred EEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 247 VCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 247 v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
++|+|++ +|++|+.|++|++||+++++...++.+| ...|++++|+| ++.+|++++.|++|++||+++++++..+.+|
T Consensus 212 l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h 289 (321)
T 3ow8_A 212 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH-ASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 289 (321)
T ss_dssp EEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCC-CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence 9999999 9999999999999999999999999999 99999999999 9999999999999999999999999999998
Q ss_pred CCe-eeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 326 SNW-LGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 326 ~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
... ..+...+++.+|++++.||+|++||..
T Consensus 290 ~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 290 QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 732 244446799999999999999999963
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=275.35 Aligned_cols=248 Identities=14% Similarity=0.093 Sum_probs=185.7
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
..|...|.+++|+|++ .+++++.+|.|++||+.++.. +.........|. ..+.+++|+|+ +.+|+++
T Consensus 79 ~~~~~~v~~~~~s~d~-----~l~~~s~dg~v~lWd~~~~~~-~~~~~~~~~~H~-----~~V~~v~~spd-g~~l~sg- 145 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-----GILVASDSGAVELWELDENET-LIVSKFCKYEHD-----DIVSTVSVLSS-GTQAVSG- 145 (344)
T ss_dssp EEESSCEEEEEEETTT-----EEEEEETTSEEEEEEECTTSS-CEEEEEEEECCS-----SCEEEEEECTT-SSEEEEE-
T ss_pred eccCCCEEEEEEeCCC-----eEEEEECCCEEEEEeccCCCc-eeEeeccccCCC-----CCEEEEEECCC-CCEEEEE-
Confidence 3567889999999973 677888999999999986522 111112222333 34679999994 5678888
Q ss_pred cccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCcccCCceeeeeecc-CCCcEEE
Q 017601 169 SFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRMKENGGCLHRICGS-VGDILYA 246 (369)
Q Consensus 169 s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~-~~~~v~~ 246 (369)
+.|++|++||............|...+..+.+. +++ ..|++++.|++|+|||++++ +++..+... ....+++
T Consensus 146 s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~---~~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~ 219 (344)
T 4gqb_B 146 SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS---PHKDSVFLSCSEDNRILLWDTRCP---KPASQIGCSAPGYLPTS 219 (344)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSCTTEEEEEETTSCEEEEETTSS---SCEEECC----CCCEEE
T ss_pred eCCCeEEEEECCCCcEEEEEcCcCCceEEEEec---CCCCCceeeecccccccccccccc---ceeeeeecceeecccee
Confidence 899999999986433222222345555555533 334 35778999999999999988 666665422 1467999
Q ss_pred EEECCCC--cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCC-CEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 247 VCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDS-NYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 247 v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~-~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
++|+|++ +|++|+.|++|+|||+++++++.++.+| ...|++++|+| ++ ++|+++|.|++|+|||++++++. .+.
T Consensus 220 ~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~fsp-~g~~~lasgs~D~~i~vwd~~~~~~~-~~~ 296 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH-SQCVTGLVFSP-HSVPFLASLSEDCSLAVLDSSLSELF-RSQ 296 (344)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC-SSCEEEEEECS-SSSCCEEEEETTSCEEEECTTCCEEE-EEC
T ss_pred eeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC-CCCEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCcEE-EEc
Confidence 9999976 7899999999999999999999999999 99999999999 76 67999999999999999988764 567
Q ss_pred cCCCee-eeeEcCCC-CEEEEEeCCCcEEEEECCCCc
Q 017601 324 GDSNWL-GFSKCSNR-DVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 324 g~~~~~-~~~~~~d~-~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+|.... .+..++++ .+|+|+|.||+|++|++.+..
T Consensus 297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 888432 34446665 578899999999999998754
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.7e-36 Score=285.44 Aligned_cols=277 Identities=13% Similarity=0.128 Sum_probs=213.4
Q ss_pred CeEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCC
Q 017601 51 CHLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSG 129 (369)
Q Consensus 51 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~ 129 (369)
..|..+++.+.+..+ ..+.++....++..... ....+.+|.+.|++++|+|++ .++++++.+|.|++||+....
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-~~~~l~~h~~~V~~v~~~~~~----~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-FERTLKGHTDSVQDISFDHSG----KLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-CCEEECCCSSCEEEEEECTTS----SEEEEEETTSCCCEEETTSSC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEeCCCCc
Confidence 345555665554444 33445544444443333 223356899999999999974 699999999999999987541
Q ss_pred CCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCC
Q 017601 130 KDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGG 207 (369)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~ 207 (369)
....+..|. ..+.+++|+|+ +..++++ +.|++|++||... .++.+. .+...+..+.+ ++++
T Consensus 184 -----~~~~~~~h~-----~~V~~v~~~p~-~~~l~s~-s~D~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~---~~~g 246 (410)
T 1vyh_C 184 -----CIRTMHGHD-----HNVSSVSIMPN-GDHIVSA-SRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRP---NQDG 246 (410)
T ss_dssp -----EEECCCCCS-----SCEEEEEECSS-SSEEEEE-ETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEE---CTTS
T ss_pred -----eeEEEcCCC-----CCEEEEEEeCC-CCEEEEE-eCCCeEEEEECCCCcEEEEEe--CCCccEEEEEE---CCCC
Confidence 112233332 34678999995 4577887 8999999999863 333332 34444444442 3567
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCC--------------------C-cEEEEeCCCcEEE
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSST--------------------G-NIAVAGADRTVTI 266 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~--------------------g-~lasgs~D~~v~v 266 (369)
..+++++.|++|++||++++ .+...+..+ ...|++++|+|+ | +|++|+.|++|++
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~---~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATK---ECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp SEEEEEETTSCEEEEETTTC---CEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CEEEEEcCCCeEEEEECCCC---ceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 78889999999999999988 777778766 689999999996 5 7999999999999
Q ss_pred EeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeC
Q 017601 267 YDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSD 345 (369)
Q Consensus 267 wD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~ 345 (369)
||+++++++.++.+| ...|++++|+| ++++|++++.|++|++||+++++++..+.+|... ..+...+++.+|++|+.
T Consensus 323 wd~~~~~~~~~~~~h-~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGH-DNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEET
T ss_pred EECCCCceEEEEECC-CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeC
Confidence 999999999999999 99999999999 9999999999999999999999999999999832 23444679999999999
Q ss_pred CCcEEEEECC
Q 017601 346 SGSIFVADVV 355 (369)
Q Consensus 346 dg~I~iWd~~ 355 (369)
||+|++|+++
T Consensus 401 D~~i~vW~~r 410 (410)
T 1vyh_C 401 DQTVKVWECR 410 (410)
T ss_dssp TSEEEEEC--
T ss_pred CCcEEEEeCC
Confidence 9999999863
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-35 Score=272.01 Aligned_cols=250 Identities=12% Similarity=0.097 Sum_probs=196.9
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++++|+|++ ..+++++.+|.|++||+.++. ....+..+ +..+.+++|+| +...++++
T Consensus 9 ~~~h~~~V~~~~fsp~~----~~l~s~~~dg~v~lWd~~~~~-----~~~~~~~~-----~~~v~~~~~~~-~~~~l~s~ 73 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTE----PWVLTTLYSGRVELWNYETQV-----EVRSIQVT-----ETPVRAGKFIA-RKNWIIVG 73 (304)
T ss_dssp EEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE-----EEEEEECC-----SSCEEEEEEEG-GGTEEEEE
T ss_pred ecCCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCc-----eeEEeecc-----CCcEEEEEEeC-CCCEEEEE
Confidence 56899999999999984 789999999999999997541 11222222 23466899999 45678887
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|++|++||............|...+..+.+ +|++..|++++.|++|+|||++++. .....+.+| ...|+++
T Consensus 74 -s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h-~~~v~~v 146 (304)
T 2ynn_A 74 -SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGH-EHFVMCV 146 (304)
T ss_dssp -ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEEGGGTT--EEEEEECCC-CSCEEEE
T ss_pred -CCCCEEEEEECCCCcEEEEEeCCCCcEEEEEE---cCCCCEEEEECCCCeEEEEECCCCc--chhhhhccc-CCcEEEE
Confidence 89999999998643332223345555655553 3456789999999999999998762 344556666 6899999
Q ss_pred EECCC-C-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCC-CCCEEEEEECCCeEEEEECcCCceeEEEEc
Q 017601 248 CSSST-G-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI-DSNYIYVQGVDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 248 ~~sp~-g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~-d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g 324 (369)
+|+|+ + .|++|+.|++|++||+++..+...+..++...+..+.|+|. ++.+|++++.|++|++||+++++++..+.+
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 226 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC
Confidence 99994 5 89999999999999999887776665442788999999872 667999999999999999999999999999
Q ss_pred CCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 325 DSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 325 ~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
|.... .+...+++.+|++|+.||+|++||+++++.
T Consensus 227 h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 98433 233467999999999999999999988763
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-35 Score=283.18 Aligned_cols=255 Identities=16% Similarity=0.216 Sum_probs=209.1
Q ss_pred cccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 86 LNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 86 ~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
..+.+|.+.|++++|+|++ .++++++.+|.|++||+.++.. ...+..|. ..+.+++|+|+ +.+++
T Consensus 102 ~~l~gh~~~V~~~~~~p~~----~~l~s~s~Dg~i~vwd~~~~~~-----~~~l~~h~-----~~V~~v~~~~~-~~~l~ 166 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVF----SVMVSASEDATIKVWDYETGDF-----ERTLKGHT-----DSVQDISFDHS-GKLLA 166 (410)
T ss_dssp CEEECCSSCEEEEEECSSS----SEEEEEESSSCEEEEETTTCCC-----CEEECCCS-----SCEEEEEECTT-SSEEE
T ss_pred EeecccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcE-----EEEEeccC-----CcEEEEEEcCC-CCEEE
Confidence 3466899999999999984 6899999999999999986521 12233332 24668999995 55788
Q ss_pred EEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 166 VARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
++ +.|++|++||... .++.+ ..|...+..+.+ .|++..+++++.|++|++||++++ .++..+.++ ...
T Consensus 167 sg-s~D~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~---~p~~~~l~s~s~D~~i~~wd~~~~---~~~~~~~~h-~~~ 236 (410)
T 1vyh_C 167 SC-SADMTIKLWDFQGFECIRTM--HGHDHNVSSVSI---MPNGDHIVSASRDKTIKMWEVQTG---YCVKTFTGH-REW 236 (410)
T ss_dssp EE-ETTSCCCEEETTSSCEEECC--CCCSSCEEEEEE---CSSSSEEEEEETTSEEEEEETTTC---CEEEEEECC-SSC
T ss_pred EE-eCCCeEEEEeCCCCceeEEE--cCCCCCEEEEEE---eCCCCEEEEEeCCCeEEEEECCCC---cEEEEEeCC-Ccc
Confidence 88 8999999999864 33333 224445555553 345778999999999999999998 788888877 688
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCC--------------------CCEEEEE
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSID--------------------SNYIYVQ 302 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d--------------------~~~l~s~ 302 (369)
|.+++|+|++ +|++|+.|++|++||++++++...+.+| ...|.+++|+| + +.+|+++
T Consensus 237 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH-RHVVECISWAP-ESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECC-SCGGGGGGGCCSCC-------CCEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCC-CceEEEEEEcC-cccccchhhhccccccccCCCCCEEEEE
Confidence 9999999999 9999999999999999999999999999 99999999999 5 6789999
Q ss_pred ECCCeEEEEECcCCceeEEEEcCCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 303 GVDYEVFCGQWRESSKVFAFRGDSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~~~~~~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
+.|++|++||++++.++..+.+|..+. .+...+++.+|++|+.||+|++||+.+++. +..+.+|.
T Consensus 315 s~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~-~~~~~~h~ 380 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-MKTLNAHE 380 (410)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-CEEEECCS
T ss_pred eCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-EEEEcCCC
Confidence 999999999999999999999998543 444567999999999999999999987753 45565553
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-34 Score=271.71 Aligned_cols=250 Identities=13% Similarity=0.077 Sum_probs=182.5
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|.+.|.+++|+|++ .+++++.+|.|++||+.++... ....+....| ...+.+++|+|+ ..+++++
T Consensus 90 ~~~~~~~V~~~~~s~d~-----~~l~~s~dg~v~lWd~~~~~~~-~~~~~~~~~h-----~~~V~~v~~spd-g~~l~sg 157 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEK-----GILVASDSGAVELWEILEKESL-LVNKFAKYEH-----DDIVKTLSVFSD-GTQAVSG 157 (357)
T ss_dssp EEECSSCEEEEEEETTT-----EEEEEETTSCEEEC---------CCCCEEECCC-----SSCEEEEEECSS-SSEEEEE
T ss_pred cCCCCCCEEEEEEcCCC-----CEEEEECCCEEEEeecccccee-EEEeeccCCC-----CCCEEEEEECCC-CCEEEEE
Confidence 45799999999999984 3445667899999999865221 1111222222 234678999994 5577887
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCcccCCceeeeeec-cCCCcEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRMKENGGCLHRICG-SVGDILY 245 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~-~~~~~v~ 245 (369)
+.|++|++||............+...+..+.+.+ ++ ..+++++.|++|+|||++++ +++..+.. .....++
T Consensus 158 -s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~---~~~~~~~s~~~dg~v~~wd~~~~---~~~~~~~~~~~~~~v~ 230 (357)
T 4g56_B 158 -GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP---GKDTIFLSCGEDGRILLWDTRKP---KPATRIDFCASDTIPT 230 (357)
T ss_dssp -ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT---TCSSCEEEEETTSCEEECCTTSS---SCBCBCCCTTCCSCEE
T ss_pred -eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc---CCCceeeeeccCCceEEEECCCC---ceeeeeeecccccccc
Confidence 8999999999864433222223445555554332 33 47888999999999999988 55444332 1147899
Q ss_pred EEEECCCC--cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCC-CEEEEEECCCeEEEEECcCCceeEEE
Q 017601 246 AVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDS-NYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 246 ~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~-~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
+++|+|++ +|++|+.|+.|++||+++++++.++.+| ...|++++|+| ++ ++|++++.|++|+|||+++++++..+
T Consensus 231 ~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp-~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH-SQNITGLAYSY-HSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC-SSCEEEEEECS-SSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred chhhhhcccceEEEeecccceeEEECCCCcEeEEEecc-ceeEEEEEEcC-CCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 99999986 7899999999999999999999999999 99999999999 65 68999999999999999998877655
Q ss_pred EcCCCe-eeeeEcC-CCCEEEEEeCCCcEEEEECCCCcc
Q 017601 323 RGDSNW-LGFSKCS-NRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 323 ~g~~~~-~~~~~~~-d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+|... ..+..+| |+.+|+|+|.||+|++|++.+...
T Consensus 309 -~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 309 -SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp -CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred -CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 67633 3444466 899999999999999999976543
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-34 Score=269.44 Aligned_cols=255 Identities=14% Similarity=0.158 Sum_probs=202.2
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|++++|+|++ .++++++.+|.|++||..+... ...+..+ ...+.+++|+|+ ..++++
T Consensus 50 ~l~gH~~~v~~~~~s~d~----~~l~s~s~Dg~v~iWd~~~~~~-----~~~~~~~-----~~~v~~~~~s~~-~~~l~s 114 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDS----RLLLSASQDGKLIIWDSYTTNK-----VHAIPLR-----SSWVMTCAYAPS-GNYVAC 114 (340)
T ss_dssp EECCCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCE-----EEEEECS-----SSCEEEEEECTT-SSEEEE
T ss_pred eecCCCCceEEEEECCCC----CEEEEEeCCCcEEEEECCCCCc-----ceEeecC-----CccEEEEEECCC-CCEEEE
Confidence 467999999999999984 7999999999999999875421 1122222 233668999995 557788
Q ss_pred EecccceEEEEeCCcc---eEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 167 ARSFSKSIDVYDQDIH---LRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
+ +.|+.|++||.... .+.... ..|...+..+.+. + ++.+++++.|++|++||++++ +++..+.+| ..
T Consensus 115 ~-~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~-~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h-~~ 185 (340)
T 1got_B 115 G-GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL---D-DNQIVTSSGDTTCALWDIETG---QQTTTFTGH-TG 185 (340)
T ss_dssp E-ETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE---E-TTEEEEEETTSCEEEEETTTT---EEEEEECCC-SS
T ss_pred E-eCCCeEEEEECccCCCcceeEEEecCCCccEEEEEEC---C-CCcEEEEECCCcEEEEECCCC---cEEEEEcCC-CC
Confidence 7 89999999997532 122222 2244444444321 2 457999999999999999988 788888866 68
Q ss_pred cEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 243 ILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
.|++++|+|++ +|++|+.|++|++||+++++++.++.+| ...|++++|+| ++++|++++.|++|++||+++++.+..
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH-ESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMT 263 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC-cCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 99999999999 9999999999999999999999999999 99999999999 999999999999999999999888777
Q ss_pred EEcCC---CeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 322 FRGDS---NWLGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 322 ~~g~~---~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
+..+. ....+...+++.+|++|+.||.|++||+.+++. +..+.||.
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-~~~~~~h~ 312 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR-AGVLAGHD 312 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECCS
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE-eeEeecCC
Confidence 75432 223445577999999999999999999987753 45566654
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.1e-34 Score=262.20 Aligned_cols=251 Identities=17% Similarity=0.175 Sum_probs=191.2
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|++++|+|++ ..++++++.++.|++|++.............+..|. ..+.+++|+| ++.++++
T Consensus 12 ~l~gH~~~V~~l~~~~~~---~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~s~-dg~~l~s 82 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQ---PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS-----HIVQDCTLTA-DGAYALS 82 (319)
T ss_dssp EECCCSSCEEEEEECSSC---TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS-----SCEEEEEECT-TSSEEEE
T ss_pred EEccccceEEEEEccCCC---ccEEEEecCCccEEEecCCCCCccccccceEEeCCc-----ccEEEEEECC-CCCEEEE
Confidence 367999999999999863 468999999999999999743211111112233332 3466899999 4567888
Q ss_pred EecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+ +.|++|++||............|...+..+.+ ++++..+++++.|++|++||++. +++..+.++ ...|.+
T Consensus 83 ~-s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h-~~~v~~ 153 (319)
T 3frx_A 83 A-SWDKTLRLWDVATGETYQRFVGHKSDVMSVDI---DKKASMIISGSRDKTIKVWTIKG----QCLATLLGH-NDWVSQ 153 (319)
T ss_dssp E-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---CTTSCEEEEEETTSCEEEEETTS----CEEEEECCC-SSCEEE
T ss_pred E-eCCCEEEEEECCCCCeeEEEccCCCcEEEEEE---cCCCCEEEEEeCCCeEEEEECCC----CeEEEEecc-CCcEEE
Confidence 8 89999999998643322222335555555553 34577899999999999999974 567777766 689999
Q ss_pred EEECCC------C-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCcee
Q 017601 247 VCSSST------G-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKV 319 (369)
Q Consensus 247 v~~sp~------g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~ 319 (369)
++|+|. + .|++|+.|++|++||+++.+....+.+| ...|++++|+| ++++|++++.|++|++||+++++++
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH-NSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC-CSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC-CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999984 4 7999999999999999999999999999 99999999999 9999999999999999999987766
Q ss_pred EEEEcCCCee-------------------------------------------------eeeEcCCCCEEEEEeCCCcEE
Q 017601 320 FAFRGDSNWL-------------------------------------------------GFSKCSNRDVLGGWSDSGSIF 350 (369)
Q Consensus 320 ~~~~g~~~~~-------------------------------------------------~~~~~~d~~~l~sgs~dg~I~ 350 (369)
..+..+.... .+..++||++|++|+.||.|+
T Consensus 232 ~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 232 YTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp EEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 6665433211 222345778888888888888
Q ss_pred EEECCCC
Q 017601 351 VADVVAK 357 (369)
Q Consensus 351 iWd~~~~ 357 (369)
+||+.++
T Consensus 312 vWd~~t~ 318 (319)
T 3frx_A 312 VWQVMTA 318 (319)
T ss_dssp EEEEEEC
T ss_pred EEEEeec
Confidence 8887654
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1e-33 Score=265.13 Aligned_cols=254 Identities=16% Similarity=0.164 Sum_probs=201.7
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|++++|+|++ .++++++.+|.|++||..+... ...+..+. ..+.+++|+|+ ...+++
T Consensus 59 ~l~gH~~~V~~~~~s~d~----~~l~s~s~Dg~v~vWd~~~~~~-----~~~~~~~~-----~~v~~~~~sp~-g~~las 123 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDK----RRIVSSSQDGKVIVWDSFTTNK-----EHAVTMPC-----TWVMACAYAPS-GCAIAC 123 (354)
T ss_dssp EEECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCE-----EEEEECSS-----SCCCEEEECTT-SSEEEE
T ss_pred EecCCCCeEEEEEECCCC----CEEEEEeCCCeEEEEECCCCCc-----ceEEecCC-----CCEEEEEECCC-CCEEEE
Confidence 357999999999999984 7999999999999999865421 11122121 22458999995 567888
Q ss_pred EecccceEEEEeCCc--------ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 167 ARSFSKSIDVYDQDI--------HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
+ +.|+.+++|+... ....+ ..|...+..+.+ .+++..|++++.|++|++||++++ +++..+.+
T Consensus 124 g-~~d~~i~v~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~---~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~ 194 (354)
T 2pbi_B 124 G-GLDNKCSVYPLTFDKNENMAAKKKSV--AMHTNYLSACSF---TNSDMQILTASGDGTCALWDVESG---QLLQSFHG 194 (354)
T ss_dssp E-STTSEEEEEECCCCTTCCSGGGCEEE--EECSSCEEEEEE---CSSSSEEEEEETTSEEEEEETTTC---CEEEEEEC
T ss_pred e-eCCCCEEEEEEeccccccccccceee--eccCCcEEEEEE---eCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcC
Confidence 7 8999999998641 12222 224444444443 345678999999999999999988 78888887
Q ss_pred cCCCcEEEEEECC--CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 239 SVGDILYAVCSSS--TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 239 ~~~~~v~~v~~sp--~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
| ...|.+++|+| ++ .|++|+.|++|++||+++++++..+.+| ...|++++|+| ++.+|++++.|++|++||++.
T Consensus 195 h-~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 195 H-GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-ESDVNSVRYYP-SGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp C-SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCEEEEETTT
T ss_pred C-CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCC
Confidence 7 68899999987 46 9999999999999999999999999999 99999999999 999999999999999999999
Q ss_pred CceeEEEEcCC---CeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 316 SSKVFAFRGDS---NWLGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 316 ~~~~~~~~g~~---~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
++.+..+..+. ....+...+++.+|++|+.|++|++||+.+++. +..+.||.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-~~~l~~h~ 326 (354)
T 2pbi_B 272 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR-VSILFGHE 326 (354)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-EEEECCCS
T ss_pred CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce-EEEEECCC
Confidence 88877776543 112344467999999999999999999988763 44566654
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.1e-34 Score=264.45 Aligned_cols=280 Identities=16% Similarity=0.143 Sum_probs=207.7
Q ss_pred eEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCC
Q 017601 52 HLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGK 130 (369)
Q Consensus 52 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~ 130 (369)
.|+.+++..++..+ ..+.++.++.++..... .......|...|.+++|+|++ ..+++++.++.+++|++.....
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~-~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN-KVHAIPLRSSWVMTCAYAPSG----NYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCC-EEEEEECSSSCEEEEEECTTS----SEEEEEETTCEEEEEETTTCSB
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCC-cceEeecCCccEEEEEECCCC----CEEEEEeCCCeEEEEECccCCC
Confidence 34455655555444 33445544433333222 222345789999999999984 6899999999999999875421
Q ss_pred CCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcE
Q 017601 131 DVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNM 210 (369)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 210 (369)
.. .....+..|. +.+.+++|++++ .++++ +.|++|++||............|...+..+.+ +|++..+
T Consensus 132 ~~-~~~~~~~~h~-----~~v~~~~~~~~~--~l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l 199 (340)
T 1got_B 132 NV-RVSRELAGHT-----GYLSCCRFLDDN--QIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVMSLSL---APDTRLF 199 (340)
T ss_dssp SC-EEEEEEECCS-----SCEEEEEEEETT--EEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEE
T ss_pred cc-eeEEEecCCC-----ccEEEEEECCCC--cEEEE-ECCCcEEEEECCCCcEEEEEcCCCCceEEEEE---CCCCCEE
Confidence 11 1111222332 336689998843 46777 89999999998643322222234455555553 3456788
Q ss_pred EEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc-ccCceEE
Q 017601 211 LAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC-SKYEITG 288 (369)
Q Consensus 211 la~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h-~~~~v~~ 288 (369)
++++.|++|++||++++ .++..+..+ ...|++++|+|++ +|++|+.|++|++||+++++.+..+..+ ....|++
T Consensus 200 ~sg~~d~~v~~wd~~~~---~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 200 VSGACDASAKLWDVREG---MCRQTFTGH-ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp EEEETTSCEEEEETTTC---SEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEEeCCCcEEEEECCCC---eeEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence 89999999999999988 788888876 6899999999999 9999999999999999998887776532 0457999
Q ss_pred EEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCee-eeeEcCCCCEEEEEeCCCcEEEEE
Q 017601 289 LSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWL-GFSKCSNRDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd 353 (369)
++|+| ++++|++++.|+.|++||+.+++.+..+.+|.... .+..++++.+|++|+.||+|++||
T Consensus 276 ~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999 99999999999999999999999999999998432 344467999999999999999996
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-33 Score=259.21 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=203.1
Q ss_pred ccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 85 MLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 85 ~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
...+.+|.+.|++++|+|++ ..+++++.+|.+++|+...+. ....+..|. .++.+++|+|+ +.++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~-----~~~~~~~h~-----~~v~~~~~~~~-~~~l 80 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGK-----FEKTISGHK-----LGISDVAWSSD-SNLL 80 (312)
T ss_dssp EEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCC-----EEEEECCCS-----SCEEEEEECTT-SSEE
T ss_pred EEEEcccCCcEEEEEECCCC----CEEEEeeCCCeEEEEeCCCcc-----cchhhccCC-----CceEEEEEcCC-CCEE
Confidence 34567999999999999984 689999999999999987541 112223332 34678999994 5677
Q ss_pred EEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 165 AVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+++ +.|+.|++||............+...+..+.+ ++++..+++++.|++|++||++++ +++..+..+ ..+|
T Consensus 81 ~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~-~~~v 152 (312)
T 4ery_A 81 VSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF---NPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAH-SDPV 152 (312)
T ss_dssp EEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETTTC---CEEEEECCC-SSCE
T ss_pred EEE-CCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE---cCCCCEEEEEeCCCcEEEEECCCC---EEEEEecCC-CCcE
Confidence 887 89999999998643222222234444544443 346778999999999999999988 778887766 6899
Q ss_pred EEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 245 YAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
.+++|+|++ +|++|+.|+.|++||+++++.+..+..+....+..++|+| ++++|++++.|+.|++||+++++++..+.
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 999999999 9999999999999999999888876544277899999999 99999999999999999999999999998
Q ss_pred cCCCeee-e--eE-cCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 324 GDSNWLG-F--SK-CSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 324 g~~~~~~-~--~~-~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
+|..... + .. .+++.+|++|+.||.|++||+.+++. +..+++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~ 279 (312)
T 4ery_A 232 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI-VQKLQGHT 279 (312)
T ss_dssp SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE-EEEECCCS
T ss_pred ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh-hhhhhccC
Confidence 8862111 1 11 24789999999999999999988763 45566653
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-34 Score=271.43 Aligned_cols=291 Identities=13% Similarity=0.098 Sum_probs=213.8
Q ss_pred CeEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCC
Q 017601 51 CHLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSG 129 (369)
Q Consensus 51 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~ 129 (369)
..|+.+++.+.+..+ ..+.++.++.++..... ....+..|...|.+++|+|++ ..+++++.++.+.+|++....
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~h~~~v~~~~~s~~g----~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-KTHAIKLHCPWVMECAFAPNG----QSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-EEEEEECCCTTCCCCEECTTS----SEEEECCSSSCCEEEECCCCS
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-cceEEecCCCCEEEEEECCCC----CEEEEeeCCCcEEEEECCCCc
Confidence 446666777766555 44556655444443332 233356899999999999984 789999999999999997542
Q ss_pred CCCc--cccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceEEEEe---eeCCcceeeeccCC
Q 017601 130 KDVD--RLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLRTLRT---LWYPSSLNFVQNLS 202 (369)
Q Consensus 130 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~~~---~~~~~~v~~~~~~~ 202 (369)
.... .....+..|. +.+.+++|+|.++..++++ +.|++|++||... .+..+.. ..|...+..+.+.+
T Consensus 142 ~~~~~~~~~~~~~gh~-----~~v~~~~~~~~~~~~l~s~-s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHK-----GYASSCQYVPDQETRLITG-SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp SCCCSSTTCCBCCCCS-----SCCCCCBCCSSSSSCEEEE-CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred cccCCccceeeccCCC-----cceEEEEEecCCCCEEEEE-CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 1100 0011122332 2344789999777788888 9999999999863 3332211 12333444444322
Q ss_pred CCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc
Q 017601 203 PVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC 281 (369)
Q Consensus 203 ~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h 281 (369)
+++..|++++.|++|++||++... .++..+.+| ...|++++|+|++ +|++|+.|++|++||+++++.+..+..+
T Consensus 216 --~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 216 --LNANMFISGSCDTTVRLWDLRITS--RAVRTYHGH-EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp --SSCCEEEEEETTSCEEEEETTTTC--CCCEEECCC-SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred --CCCCEEEEEECCCeEEEEECCCCC--cceEEECCc-CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 245788899999999999998542 567777766 6899999999999 9999999999999999999988877654
Q ss_pred c------cCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE----EcCCCe-eeeeEcCCCCEEEEEeCCCcEE
Q 017601 282 S------KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF----RGDSNW-LGFSKCSNRDVLGGWSDSGSIF 350 (369)
Q Consensus 282 ~------~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~----~g~~~~-~~~~~~~d~~~l~sgs~dg~I~ 350 (369)
. ...|++++|+| ++++|++++.|+.|++||+..++....+ .+|... ..+..++|+.+|++||.||+|+
T Consensus 291 ~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp CSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred ccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 1 12489999999 9999999999999999999998888877 567632 2344477999999999999999
Q ss_pred EEECCCCc
Q 017601 351 VADVVAKE 358 (369)
Q Consensus 351 iWd~~~~~ 358 (369)
+|++...+
T Consensus 370 iW~~~~~~ 377 (380)
T 3iz6_a 370 IWAFSGHR 377 (380)
T ss_dssp EEECCSSS
T ss_pred EEecCCCc
Confidence 99998764
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.2e-34 Score=264.87 Aligned_cols=262 Identities=14% Similarity=0.052 Sum_probs=190.5
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCC--CCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSG--KDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
...|...|++++|+||+ .+|++++ ++.+++||..... ........... ......+.++.+++|+|+ . .++
T Consensus 26 ~~~~~~~v~~~~fs~dG----~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~d-~-~l~ 97 (344)
T 4gqb_B 26 PACMERQLEAARYRSDG----ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFC-SAGVQTEAGVADLTWVGE-R-GIL 97 (344)
T ss_dssp CSSCCSEEEEEEECTTS----CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGC-SEEEEESSCEEEEEEETT-T-EEE
T ss_pred cccccCCEEEEEECCCC----CEEEEEe-CCceEEeeceeeeeccccccCCccee-eeeeccCCCEEEEEEeCC-C-eEE
Confidence 34578889999999984 5666665 4455555532110 00000000000 000112346789999995 3 567
Q ss_pred EEecccceEEEEeCC--cceEEE--EeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCC
Q 017601 166 VARSFSKSIDVYDQD--IHLRTL--RTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVG 241 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~--~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~ 241 (369)
++ +.|++|+|||.. +..... ....|...+..+.+ +|++..|++++.|++|+|||++++ +++..+.+| .
T Consensus 98 ~~-s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---spdg~~l~sgs~d~~i~iwd~~~~---~~~~~~~~h-~ 169 (344)
T 4gqb_B 98 VA-SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LSSGTQAVSGSKDICIKVWDLAQQ---VVLSSYRAH-A 169 (344)
T ss_dssp EE-ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTT---EEEEEECCC-S
T ss_pred EE-ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCc-C
Confidence 77 899999999975 233322 22345556666553 456788999999999999999988 888888877 7
Q ss_pred CcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCc
Q 017601 242 DILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESS 317 (369)
Q Consensus 242 ~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~ 317 (369)
..|++++|+|++ +|++|+.|++|++||++++++..++. .| ...+++++|+|.++++|++++.|++|++||+++++
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAP-GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeeccee-eccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 899999999998 68999999999999999999888775 34 56799999999667889999999999999999999
Q ss_pred eeEEEEcCCCee-eeeEcCCC-CEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 318 KVFAFRGDSNWL-GFSKCSNR-DVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 318 ~~~~~~g~~~~~-~~~~~~d~-~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
++..+.+|.... .+..++++ .+|++||.|++|+|||+.+++. ..+.||.
T Consensus 249 ~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~--~~~~~H~ 299 (344)
T 4gqb_B 249 CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL--FRSQAHR 299 (344)
T ss_dssp CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE--EEECCCS
T ss_pred EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE--EEEcCCC
Confidence 999999998432 34446676 6899999999999999988763 3456664
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.3e-33 Score=259.28 Aligned_cols=283 Identities=14% Similarity=0.104 Sum_probs=208.6
Q ss_pred CeEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCC
Q 017601 51 CHLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSG 129 (369)
Q Consensus 51 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~ 129 (369)
..|+.+++...+..+ ..+.++..+.++..... .......|...|.+++|+|++ ..+++++.++.+.+|++....
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~-~~~~~~~~~~~v~~~~~sp~g----~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN-KEHAVTMPCTWVMACAYAPSG----CAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSSCCCEEEECTTS----SEEEEESTTSEEEEEECCCCT
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-cceEEecCCCCEEEEEECCCC----CEEEEeeCCCCEEEEEEeccc
Confidence 334555665554443 44455554444433222 122244688899999999984 789999999999999987542
Q ss_pred CCCc-cccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCC
Q 017601 130 KDVD-RLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNG 206 (369)
Q Consensus 130 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~ 206 (369)
.... .....+..| ...+.+++|+|+ ...++++ +.|++|++||... .+..+. .|...+..+...+ +++
T Consensus 140 ~~~~~~~~~~~~~h-----~~~v~~~~~~~~-~~~l~t~-s~D~~v~lwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~ 209 (354)
T 2pbi_B 140 NENMAAKKKSVAMH-----TNYLSACSFTNS-DMQILTA-SGDGTCALWDVESGQLLQSFH--GHGADVLCLDLAP-SET 209 (354)
T ss_dssp TCCSGGGCEEEEEC-----SSCEEEEEECSS-SSEEEEE-ETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECC-CSS
T ss_pred cccccccceeeecc-----CCcEEEEEEeCC-CCEEEEE-eCCCcEEEEeCCCCeEEEEEc--CCCCCeEEEEEEe-CCC
Confidence 1111 111122222 234678999995 4567777 8999999999864 333332 2444444444322 134
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc-ccC
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC-SKY 284 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h-~~~ 284 (369)
+..|++++.|++|++||++++ +++..+..| ...|++++|+|++ .|++|+.|++|++||+++.+.+..+..+ ...
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~---~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSG---QCVQAFETH-ESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTC---CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS
T ss_pred CCEEEEEeCCCeEEEEECCCC---cEEEEecCC-CCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc
Confidence 568999999999999999998 788888766 6899999999999 9999999999999999998877766543 145
Q ss_pred ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCee-eeeEcCCCCEEEEEeCCCcEEEEE
Q 017601 285 EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWL-GFSKCSNRDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd 353 (369)
.+++++|+| ++.+|++++.|++|++||+.+++.+..+.+|.... .+..++|+.+|++|+.||+|++|+
T Consensus 286 ~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 286 GASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 789999999 99999999999999999999999999999998432 344477999999999999999996
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-33 Score=283.08 Aligned_cols=248 Identities=13% Similarity=0.100 Sum_probs=193.8
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++++|+|++ .+||+++.+|+|++||+..... .....+..|. +.+.+++|+|++ ..++++
T Consensus 55 ~~~h~~~v~~~~~spdg----~~lasg~~d~~v~lWd~~~~~~---~~~~~~~~~~-----~~v~~v~fs~dg-~~l~~~ 121 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSG----YYCASGDVHGNVRIWDTTQTTH---ILKTTIPVFS-----GPVKDISWDSES-KRIAAV 121 (611)
T ss_dssp ECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEESSSTTC---CEEEEEECSS-----SCEEEEEECTTS-CEEEEE
T ss_pred ecCCCCceEEEEECCCC----cEEEEEeCCCCEEEeECCCCcc---eeeEeecccC-----CceEEEEECCCC-CEEEEE
Confidence 56899999999999984 7999999999999999864321 1112222332 346789999965 456665
Q ss_pred ecc---cceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 168 RSF---SKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 168 ~s~---d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
+.. ++.|++||.+.....+. .|...+..+.+. |++. .|++++.|++|++||.++. +++..+.+| ...
T Consensus 122 ~~~~~~~~~v~~wd~~~~~~~l~--gh~~~v~~v~f~---p~~~~~l~s~s~D~~v~lwd~~~~---~~~~~l~~H-~~~ 192 (611)
T 1nr0_A 122 GEGRERFGHVFLFDTGTSNGNLT--GQARAMNSVDFK---PSRPFRIISGSDDNTVAIFEGPPF---KFKSTFGEH-TKF 192 (611)
T ss_dssp ECCSSCSEEEEETTTCCBCBCCC--CCSSCEEEEEEC---SSSSCEEEEEETTSCEEEEETTTB---EEEEEECCC-SSC
T ss_pred ECCCCceeEEEEeeCCCCcceec--CCCCCceEEEEC---CCCCeEEEEEeCCCeEEEEECCCC---eEeeeeccc-cCc
Confidence 232 25899999776554432 244455555543 4444 5888999999999999877 778888877 689
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecc-------ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWV-------HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~-------~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
|++++|+|+| +||+|+.|++|++||+++++.+..+. +| ...|++++|+| ++++|++++.|++|++||+++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h-~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAH-SGSVFGLTWSP-DGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSS-SSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccccccc-CCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCC
Confidence 9999999999 99999999999999999999888874 78 99999999999 999999999999999999988
Q ss_pred CceeEEE-------------------------------------------EcCCCe-eeeeEcCCCCEEEEEeCCCcEEE
Q 017601 316 SSKVFAF-------------------------------------------RGDSNW-LGFSKCSNRDVLGGWSDSGSIFV 351 (369)
Q Consensus 316 ~~~~~~~-------------------------------------------~g~~~~-~~~~~~~d~~~l~sgs~dg~I~i 351 (369)
++++..+ .+|... ..+..++|+++|++++.|++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 7655443 356522 23444679999999999999999
Q ss_pred EECCCCcc
Q 017601 352 ADVVAKEN 359 (369)
Q Consensus 352 Wd~~~~~~ 359 (369)
||+.+++.
T Consensus 351 Wd~~~~~~ 358 (611)
T 1nr0_A 351 WDISTGIS 358 (611)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 99988764
No 17
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-32 Score=251.78 Aligned_cols=281 Identities=8% Similarity=-0.046 Sum_probs=201.4
Q ss_pred CeEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCC
Q 017601 51 CHLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSG 129 (369)
Q Consensus 51 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~ 129 (369)
..|..+++.+.+..+ ..+.++....++.+... ....+..|...|.+++|+|++ ..+++++.++.|++||+.++.
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-~~~~~~~~~~~v~~~~~~~~~----~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-EVRSIQVTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-EEEEEECCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-eeEEeeccCCcEEEEEEeCCC----CEEEEECCCCEEEEEECCCCc
Confidence 334445555544443 22334433333333222 222356799999999999984 789999999999999998652
Q ss_pred CCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEee-eCCcceeeeccCCCCCCCC
Q 017601 130 KDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTL-WYPSSLNFVQNLSPVNGGP 208 (369)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 208 (369)
....+..|. ..+.+++|+|+ ..+++++ +.|++|++||........... .|...+..+.+.| .++.
T Consensus 89 -----~~~~~~~h~-----~~v~~~~~~~~-~~~l~sg-s~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~ 154 (304)
T 2ynn_A 89 -----KVVDFEAHP-----DYIRSIAVHPT-KPYVLSG-SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP--KDPS 154 (304)
T ss_dssp -----EEEEEECCS-----SCEEEEEECSS-SSEEEEE-ETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT--TCTT
T ss_pred -----EEEEEeCCC-----CcEEEEEEcCC-CCEEEEE-CCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC--CCCC
Confidence 122233333 23668999995 4577887 899999999986432222222 2444455555433 1346
Q ss_pred cEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECC--CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCc
Q 017601 209 NMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSS--TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYE 285 (369)
Q Consensus 209 ~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp--~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~ 285 (369)
.|++++.|++|++||+++. .+...+..+....+..++|+| ++ +|++|+.|++|++||+++++++.++.+| ...
T Consensus 155 ~l~sgs~D~~v~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h-~~~ 230 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQS---TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-MSN 230 (304)
T ss_dssp EEEEEETTSEEEEEETTCS---SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC-SSC
T ss_pred EEEEEeCCCeEEEEECCCC---CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC-CCC
Confidence 7888999999999999877 454444432247899999987 56 9999999999999999999999999999 999
Q ss_pred eEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCC--EEEEEeCCCcEEEEECCC
Q 017601 286 ITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRD--VLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 286 v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~--~l~sgs~dg~I~iWd~~~ 356 (369)
|++++|+| ++.+|+|++.|++|++||++++++...+.+|... ..+...+++. ++++|+.|| +.+|++.+
T Consensus 231 v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 231 VSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 99999999 9999999999999999999999999999887632 2344355543 588887666 66777754
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-33 Score=262.38 Aligned_cols=258 Identities=16% Similarity=0.210 Sum_probs=195.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCC-------------CCCCCCCeeEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQD-------------CGVGEGSWSGL 154 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l 154 (369)
..+|.+.|++++|+||+ .++|++. ++.+.+|++..+.. + ..+..+. .......+.++
T Consensus 60 ~~~h~~~V~~v~fspdg----~~la~g~-~~~v~i~~~~~g~~-~----~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDG----EYLATGC-NKTTQVYRVSDGSL-V----ARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp EEECSSCCCEEEECTTS----SEEEEEC-BSCEEEEETTTCCE-E----EEECC-----------------CCCCBEEEE
T ss_pred ecCCCCEEEEEEECCCC----CEEEEEc-CCcEEEEEecCCCE-E----EEecCccccccccccccccccCCCceeEEEE
Confidence 34799999999999984 5777765 57999999875521 0 0111000 00112236789
Q ss_pred EECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceee
Q 017601 155 CFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLH 234 (369)
Q Consensus 155 ~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~ 234 (369)
+|+|+ +.+++++ +.|++|+|||............|...+..+.+ .|++..|++++.|++|++||++++ ++..
T Consensus 130 ~~s~d-g~~l~s~-~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~p~~~~l~s~s~d~~v~iwd~~~~---~~~~ 201 (393)
T 1erj_A 130 CFSPD-GKFLATG-AEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDLRTG---QCSL 201 (393)
T ss_dssp EECTT-SSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETTTT---EEEE
T ss_pred EECCC-CCEEEEE-cCCCeEEEEECCCCcEEEEEccCCCCEEEEEE---cCCCCEEEEecCCCcEEEEECCCC---eeEE
Confidence 99994 5578887 89999999998644332222335555555553 346778999999999999999988 7777
Q ss_pred eeeccCCCcEEEEEECC-CC-cEEEEeCCCcEEEEeCCCceeeeec-------cccccCceEEEEEcCCCCCEEEEEECC
Q 017601 235 RICGSVGDILYAVCSSS-TG-NIAVAGADRTVTIYDPRRWSALSRW-------VHCSKYEITGLSFSSIDSNYIYVQGVD 305 (369)
Q Consensus 235 ~~~~~~~~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~~~~~~~~-------~~h~~~~v~~l~~sp~d~~~l~s~s~D 305 (369)
.+.++ ..+.+++|+| ++ +|++|+.|++|++||+++++.+..+ .+| ...|++++|+| ++++|++++.|
T Consensus 202 ~~~~~--~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~~-~g~~l~s~s~d 277 (393)
T 1erj_A 202 TLSIE--DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH-KDSVYSVVFTR-DGQSVVSGSLD 277 (393)
T ss_dssp EEECS--SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC-SSCEEEEEECT-TSSEEEEEETT
T ss_pred EEEcC--CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC-CCCEEEEEECC-CCCEEEEEeCC
Confidence 77766 8899999999 77 9999999999999999998887766 578 89999999999 99999999999
Q ss_pred CeEEEEECcC------------CceeEEEEcCCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 306 YEVFCGQWRE------------SSKVFAFRGDSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 306 ~~i~vwd~~~------------~~~~~~~~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
++|++||+++ +.+...+.+|..+. .+...+++.+|++|+.|+.|++||+++++. +..++||.
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~-~~~l~~h~ 352 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-LLMLQGHR 352 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-EEEEECCS
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-EEEECCCC
Confidence 9999999975 34567788888432 334456899999999999999999998864 45566664
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-33 Score=264.20 Aligned_cols=242 Identities=14% Similarity=0.192 Sum_probs=184.9
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
+...|++++|+|++ ..+++++.+|.|++||+.+.. ....+..|. ..+.+++|+|++ ..++++ +.
T Consensus 122 ~~~~v~~v~~s~dg----~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~h~-----~~v~~~~~~p~~-~~l~s~-s~ 185 (393)
T 1erj_A 122 SDLYIRSVCFSPDG----KFLATGAEDRLIRIWDIENRK-----IVMILQGHE-----QDIYSLDYFPSG-DKLVSG-SG 185 (393)
T ss_dssp CCCBEEEEEECTTS----SEEEEEETTSCEEEEETTTTE-----EEEEECCCS-----SCEEEEEECTTS-SEEEEE-ET
T ss_pred CceeEEEEEECCCC----CEEEEEcCCCeEEEEECCCCc-----EEEEEccCC-----CCEEEEEEcCCC-CEEEEe-cC
Confidence 34469999999984 689999999999999987541 112233333 346689999954 567777 89
Q ss_pred cceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee-------eccCCCc
Q 017601 171 SKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI-------CGSVGDI 243 (369)
Q Consensus 171 d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~-------~~~~~~~ 243 (369)
|++|++||........ ...+...+..+.+.+ .++..+++++.|++|++||++++ ..+..+ .+| ...
T Consensus 186 d~~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~--~~~~~l~~~s~d~~v~iwd~~~~---~~~~~~~~~~~~~~~h-~~~ 258 (393)
T 1erj_A 186 DRTVRIWDLRTGQCSL-TLSIEDGVTTVAVSP--GDGKYIAAGSLDRAVRVWDSETG---FLVERLDSENESGTGH-KDS 258 (393)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEECS--TTCCEEEEEETTSCEEEEETTTC---CEEEEEC------CCC-SSC
T ss_pred CCcEEEEECCCCeeEE-EEEcCCCcEEEEEEC--CCCCEEEEEcCCCcEEEEECCCC---cEEEeecccccCCCCC-CCC
Confidence 9999999986432222 222333344443322 25678888999999999999987 566555 233 588
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCc------------eeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEE
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRW------------SALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFC 310 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~------------~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~v 310 (369)
|++++|+|+| +|++|+.|++|++||+++. .+..++.+| ...|.+++|+| ++.+|++++.|++|++
T Consensus 259 v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH-KDFVLSVATTQ-NDEYILSGSKDRGVLF 336 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC-SSCEEEEEECG-GGCEEEEEETTSEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecc-cCcEEEEEECC-CCCEEEEEeCCCeEEE
Confidence 9999999999 9999999999999999763 345677899 99999999999 9999999999999999
Q ss_pred EECcCCceeEEEEcCCCee-eeeEc------CCCCEEEEEeCCCcEEEEECCCC
Q 017601 311 GQWRESSKVFAFRGDSNWL-GFSKC------SNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 311 wd~~~~~~~~~~~g~~~~~-~~~~~------~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
||+++++++..+.+|.... .+... +++.+|++|+.||+|++|+++..
T Consensus 337 wd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 337 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999999999999998322 22222 26789999999999999998653
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-33 Score=264.92 Aligned_cols=248 Identities=15% Similarity=0.120 Sum_probs=191.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++++|+|++ ..|++++.+|+|++||..+.. ....+..|.. .+.+++|+|+ ...++++
T Consensus 62 l~gH~~~V~~~~~sp~~----~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~-----~v~~~~~s~~-g~~las~ 126 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEK----NWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCP-----WVMECAFAPN-GQSVACG 126 (380)
T ss_dssp ECCCSSCEEEEEECTTS----SCEEEEETTSEEEEEETTTTE-----EEEEEECCCT-----TCCCCEECTT-SSEEEEC
T ss_pred ccccccEEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCc-----cceEEecCCC-----CEEEEEECCC-CCEEEEe
Confidence 67999999999999984 689999999999999987541 1222333332 2447999995 5677887
Q ss_pred ecccceEEEEeCCcce------EEEEe-eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee----
Q 017601 168 RSFSKSIDVYDQDIHL------RTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI---- 236 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~------~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~---- 236 (369)
+.|+.|++||..... ...+. ..|...+..+.+.+ .++..|++++.|++|++||++++ +++..+
T Consensus 127 -~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~--~~~~~l~s~s~D~~i~~wd~~~~---~~~~~~~~~~ 200 (380)
T 3iz6_a 127 -GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP--DQETRLITGSGDQTCVLWDVTTG---QRISIFGSEF 200 (380)
T ss_dssp -CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCS--SSSSCEEEECTTSCEEEECTTTC---CEEEEECCCS
T ss_pred -eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEec--CCCCEEEEECCCCcEEEEEcCCC---cEEEEeeccc
Confidence 899999999975211 00111 12333333333322 12457999999999999999988 666655
Q ss_pred -eccCCCcEEEEEECC-CC-cEEEEeCCCcEEEEeCCC-ceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEE
Q 017601 237 -CGSVGDILYAVCSSS-TG-NIAVAGADRTVTIYDPRR-WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQ 312 (369)
Q Consensus 237 -~~~~~~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~-~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd 312 (369)
.+| ...|.+++|+| ++ +|++|+.|++|++||++. .+.+..+.+| ...|++++|+| ++++|+++|.|++|++||
T Consensus 201 ~~~h-~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h-~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 201 PSGH-TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH-EGDINSVKFFP-DGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SSSC-CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-SSCCCEEEECT-TSSEEEEECSSSCEEEEE
T ss_pred CCCC-ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-CCCeEEEEEec-CCCeEEEEcCCCeEEEEE
Confidence 334 57899999987 66 999999999999999984 6788899999 99999999999 999999999999999999
Q ss_pred CcCCceeEEEEcCCC--------eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 313 WRESSKVFAFRGDSN--------WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 313 ~~~~~~~~~~~g~~~--------~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+++++++..+..+.. ...+..+++|.+|++|+.||.|++||+.+++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred CCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 999999888865431 12344567999999999999999999987754
No 21
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.9e-32 Score=260.80 Aligned_cols=311 Identities=15% Similarity=0.144 Sum_probs=220.7
Q ss_pred CccccceeEEEecCCCceEEEEEEeCCeEEEEEEeCCchhhh--c----CCCccccccCcccccccccccCCccceeeEE
Q 017601 25 GNIQCTRLALHVNEDGCSCFVYIASGCHLYKLQVMMDDWFVS--E----GKDSLLIPEQTPVMDSSMLNRCPHRSEVQSI 98 (369)
Q Consensus 25 ~~~~~~r~~~~~~~~~~~~~~~~as~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l 98 (369)
.++..+|++++|++.+++++++++ .+.+|..... . .+++-.-.......+.......+|.+.|+++
T Consensus 63 ~~~~~~~~~~GT~t~~~~n~i~i~--------~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 134 (430)
T 2xyi_A 63 KDYSVHRLILGTHTSDEQNHLLIA--------SVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRA 134 (430)
T ss_dssp CSCEEEEEEEECCCSSSCEEEEEE--------EEEEC--------------------------CEEEEEEEEESSCCSEE
T ss_pred CCcceEEEEEEEcCCCCCCEEEEE--------EEECCCCccccccccccccccccccccCCCCceEEEEEEcCCCcEEEE
Confidence 345679999999987799999988 5555532110 0 0000000000112223344567899999999
Q ss_pred EEeecCCCCceEEEEEecCCcEEEEEecCCCCCCc-----cccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccce
Q 017601 99 ALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVD-----RLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKS 173 (369)
Q Consensus 99 ~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~ 173 (369)
+|+|++ ..++++++.+|.|++|++........ .....+..|. ..+.+++|+|.+..+++++ +.|++
T Consensus 135 ~~~p~~---~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s~-~~dg~ 205 (430)
T 2xyi_A 135 RYMPQN---ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ-----KEGYGLSWNPNLNGYLLSA-SDDHT 205 (430)
T ss_dssp EEETTE---EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS-----SCCCCEEECTTSTTEEEEE-CTTSC
T ss_pred EECCCC---CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCC-----CCeEEEEeCCCCCCeEEEE-eCCCe
Confidence 999963 57999999999999999986311110 1112222232 2345899999776688888 89999
Q ss_pred EEEEeCCcc------eEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 174 IDVYDQDIH------LRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 174 i~lwd~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
|++||+... ....... .+...+..+.+.+. ++..|++++.|+.|++||++++...+.+..+..+ ...|++
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~ 282 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL--HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH-TAEVNC 282 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS--CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC-SSCEEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC--CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC-CCCeEE
Confidence 999998641 1111122 34455666665432 3457778889999999999987433566666655 589999
Q ss_pred EEECCCC--cEEEEeCCCcEEEEeCCC-ceeeeeccccccCceEEEEEcCCCC-CEEEEEECCCeEEEEECcC-------
Q 017601 247 VCSSSTG--NIAVAGADRTVTIYDPRR-WSALSRWVHCSKYEITGLSFSSIDS-NYIYVQGVDYEVFCGQWRE------- 315 (369)
Q Consensus 247 v~~sp~g--~lasgs~D~~v~vwD~~~-~~~~~~~~~h~~~~v~~l~~sp~d~-~~l~s~s~D~~i~vwd~~~------- 315 (369)
++|+|++ .|++|+.|++|++||+++ ..++..+.+| ...|++++|+| ++ .+|++++.|+.|++||+..
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~i~~sp-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEEEEECS-SCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEEEEECC-CCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999 689999999999999998 6778899999 99999999999 76 5799999999999999987
Q ss_pred -------CceeEEEEcCCC-eeeeeEcCCCC-EEEEEeCCCcEEEEECCCC
Q 017601 316 -------SSKVFAFRGDSN-WLGFSKCSNRD-VLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 316 -------~~~~~~~~g~~~-~~~~~~~~d~~-~l~sgs~dg~I~iWd~~~~ 357 (369)
.++++.+.+|.. ...+...+++. +|++++.||.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 367788888873 23445567777 9999999999999998754
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.9e-33 Score=260.25 Aligned_cols=250 Identities=12% Similarity=0.117 Sum_probs=187.6
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEec------CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCce
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDS------YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS 162 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 162 (369)
..|++.|++++|+||+ .+|++++. +|.+++|+...+...... ..... ..+.++.+++|+|++ .
T Consensus 39 ~~H~~~V~~v~fSpDG----~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-~~~~~-----~~~~~V~~~~~s~d~-~ 107 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDG----ALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-CTAGV-----QTEAGVTDVAWVSEK-G 107 (357)
T ss_dssp -CCCSEEEEEEECSSS----CEEEEEECSSSSSCCEEEEEESSCC---CGGG-CSEEE-----ECSSCEEEEEEETTT-E
T ss_pred ccccCCEEEEEECCCC----CEEEEEcCCCCccccCeEEEEECCCCCcceeE-ecccC-----CCCCCEEEEEEcCCC-C
Confidence 4699999999999984 68888876 678999987654211100 00111 123457899999953 3
Q ss_pred eEEEEecccceEEEEeCCcc----eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 163 MAAVARSFSKSIDVYDQDIH----LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
++++ +.|++|+|||+... ...+....|...+..+.+ +|++..|++++.|++|+|||++++ +++..+..
T Consensus 108 -~l~~-s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~---spdg~~l~sgs~dg~v~iwd~~~~---~~~~~~~~ 179 (357)
T 4g56_B 108 -ILVA-SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV---FSDGTQAVSGGKDFSVKVWDLSQK---AVLKSYNA 179 (357)
T ss_dssp -EEEE-ETTSCEEEC--------CCCCEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETTTT---EEEEEECC
T ss_pred -EEEE-ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcC
Confidence 4555 68999999997532 122222335555555553 356778999999999999999988 78888887
Q ss_pred cCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECc
Q 017601 239 SVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWR 314 (369)
Q Consensus 239 ~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~ 314 (369)
+ ...|++++|+|++ .+++++.|++|++||++++++...+. .| ...+++++|+|..+.+|++++.|+.|++||++
T Consensus 180 h-~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 180 H-SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS-DTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp C-SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC-CSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred C-CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccc-cccccchhhhhcccceEEEeecccceeEEECC
Confidence 6 6899999999998 89999999999999999988876554 45 67899999999446789999999999999999
Q ss_pred CCceeEEEEcCCCe-eeeeEcCCC-CEEEEEeCCCcEEEEECCCCcc
Q 017601 315 ESSKVFAFRGDSNW-LGFSKCSNR-DVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 315 ~~~~~~~~~g~~~~-~~~~~~~d~-~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
++++++.+.+|... ..+..++++ .+|++|+.|++|+|||+++++.
T Consensus 258 ~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 258 NPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 99999999998733 233445665 6899999999999999998764
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=252.49 Aligned_cols=250 Identities=11% Similarity=0.099 Sum_probs=184.1
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|++.|++++|+|+ ++++++.++.|++|++....... ...+.. ......+.+++|+|+ ..+++++
T Consensus 10 ~~~h~~~v~~~~~s~~------~las~~~D~~i~lw~~~~~~~~~---~~~~~~---~~h~~~v~~v~~sp~-~~~las~ 76 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG------ILATGSTDRKIKLVSVKYDDFTL---IDVLDE---TAHKKAIRSVAWRPH-TSLLAAG 76 (330)
T ss_dssp EECCSSCEEEEEEETT------EEEEEESSSCEEEEECSSSCCEE---EEEECT---TCCCSCEEEEEECTT-SSEEEEE
T ss_pred eccCCCceeeeccCCC------EEEEEcCCCEEEEEEecCCCeEE---EEEEec---CCccCCEEEEEECCC-CCEEEEE
Confidence 5689999999999874 89999999999999997541110 111100 111234779999995 5678888
Q ss_pred ecccceEEEEeCCcc------eEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcc-cCCceeeeeecc
Q 017601 168 RSFSKSIDVYDQDIH------LRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMK-ENGGCLHRICGS 239 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~-~~~~~~~~~~~~ 239 (369)
+.|++|+|||.... ...+..+ .|...+..+.+ +|++..|++++.|++|+|||++.. ...+++..+..|
T Consensus 77 -s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~---sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h 152 (330)
T 2hes_X 77 -SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW---SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH 152 (330)
T ss_dssp -ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE---CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC
T ss_pred -eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE---CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC
Confidence 89999999997421 1122222 24445555553 356778999999999999999543 222456667766
Q ss_pred CCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCc--eeeeeccccccCceEEEEEcCCC--CCEEEEEECCCeEEEEECc
Q 017601 240 VGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRW--SALSRWVHCSKYEITGLSFSSID--SNYIYVQGVDYEVFCGQWR 314 (369)
Q Consensus 240 ~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~--~~~~~~~~h~~~~v~~l~~sp~d--~~~l~s~s~D~~i~vwd~~ 314 (369)
...|++++|+|++ +|++|+.|++|++||.+++ +++..+.+| ...|.+++|+| + +.+|++++.|++|++||++
T Consensus 153 -~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 153 -SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp -SSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEE
T ss_pred -CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEec
Confidence 6899999999999 9999999999999998775 678899999 99999999999 7 6789999999999999997
Q ss_pred CC--------ceeEEEEc-CCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 315 ES--------SKVFAFRG-DSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 315 ~~--------~~~~~~~g-~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
.+ .+...+.+ |.... .+... ++.+|++++.||+|++||..+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-~~~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWG-FNGLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEEC-TTSCEEEEETTSCEEEEEEETTE
T ss_pred CCCccccceeEEeeecccccccceEEEEEc-CCCEEEEEeCCCEEEEEEcCCCc
Confidence 64 34444544 65222 22223 45589999999999999987763
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=253.23 Aligned_cols=252 Identities=13% Similarity=0.120 Sum_probs=191.8
Q ss_pred cCCccc-eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 88 RCPHRS-EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 88 ~~~H~~-~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
+.+|.+ +|++++|+|++ .+||+++.++.|++|++..... . ........| ...+.+++|+|+ +.+|++
T Consensus 11 ~~~h~~~~v~~l~~sp~g----~~las~~~D~~i~iw~~~~~~~-~-~~~~~~~~h-----~~~v~~~~~sp~-g~~l~s 78 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAG----TLLASCGGDRRIRIWGTEGDSW-I-CKSVLSEGH-----QRTVRKVAWSPC-GNYLAS 78 (345)
T ss_dssp ECCSTTSCEEEEEECTTS----SCEEEEETTSCEEEEEEETTEE-E-EEEEECSSC-----SSCEEEEEECTT-SSEEEE
T ss_pred ecCCCCCcEEEEEECCCC----CEEEEEcCCCeEEEEEcCCCcc-e-eeeeecccc-----CCcEEEEEECCC-CCEEEE
Confidence 457887 99999999984 7899999999999999975410 0 000111222 234678999994 567888
Q ss_pred EecccceEEEEeCCcc-eEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 167 ARSFSKSIDVYDQDIH-LRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+ +.|++|+|||.... ...+..+ .|...+..+.+ +|++..|++++.|++|++||++++....++..+..+ ...|
T Consensus 79 ~-s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~---sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h-~~~v 153 (345)
T 3fm0_A 79 A-SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAW---APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH-TQDV 153 (345)
T ss_dssp E-ETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC-CSCE
T ss_pred E-ECCCcEEEEEccCCCeEEEEEccCCCCCceEEEE---eCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc-CCCe
Confidence 8 89999999997532 2222222 34455655554 346778999999999999999876433455666665 6889
Q ss_pred EEEEECCCC-cEEEEeCCCcEEEEeCCCce--eeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC-----
Q 017601 245 YAVCSSSTG-NIAVAGADRTVTIYDPRRWS--ALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES----- 316 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D~~v~vwD~~~~~--~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~----- 316 (369)
++++|+|++ +|++|+.|++|++||+++++ +..++.+| ...|++++|+| ++++|++++.|++|++||....
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCcc
Confidence 999999999 99999999999999998764 45788999 99999999999 9999999999999999997431
Q ss_pred ----------ceeEEEEc-CCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 317 ----------SKVFAFRG-DSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 317 ----------~~~~~~~g-~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+++..+.+ |.. ...+..++++..|++++.|+.|++|+...+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 33445555 542 2344446789999999999999999987653
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=252.75 Aligned_cols=251 Identities=14% Similarity=0.138 Sum_probs=185.2
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|.+.|++++|+|++ ..|++++.++.+++|++..... .....+..|. ..+.+++|+| ++.+|+++
T Consensus 57 ~~~h~~~v~~~~~sp~g----~~l~s~s~D~~v~iw~~~~~~~---~~~~~~~~h~-----~~v~~v~~sp-~~~~l~s~ 123 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCG----NYLASASFDATTCIWKKNQDDF---ECVTTLEGHE-----NEVKSVAWAP-SGNLLATC 123 (345)
T ss_dssp CSSCSSCEEEEEECTTS----SEEEEEETTSCEEEEEECCC-E---EEEEEECCCS-----SCEEEEEECT-TSSEEEEE
T ss_pred ccccCCcEEEEEECCCC----CEEEEEECCCcEEEEEccCCCe---EEEEEccCCC-----CCceEEEEeC-CCCEEEEE
Confidence 46899999999999984 6899999999999999875411 1112233332 3467899999 45678888
Q ss_pred ecccceEEEEeCCc--ceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 168 RSFSKSIDVYDQDI--HLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 168 ~s~d~~i~lwd~~~--~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+.|++|++||... ....+... .+...+..+.+ +|++..|++++.|++|++||.++++ ..+...+.+| ...|
T Consensus 124 -s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~---~p~~~~l~s~s~d~~i~~w~~~~~~-~~~~~~~~~h-~~~v 197 (345)
T 3fm0_A 124 -SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW---HPSQELLASASYDDTVKLYREEEDD-WVCCATLEGH-ESTV 197 (345)
T ss_dssp -ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE---CSSSSCEEEEETTSCEEEEEEETTE-EEEEEEECCC-SSCE
T ss_pred -ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE---CCCCCEEEEEeCCCcEEEEEecCCC-EEEEEEecCC-CCce
Confidence 8999999999753 22222222 24445555553 3467789999999999999998751 1244566666 6899
Q ss_pred EEEEECCCC-cEEEEeCCCcEEEEeCCC---------------ceeeeeccc-cccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 245 YAVCSSSTG-NIAVAGADRTVTIYDPRR---------------WSALSRWVH-CSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D~~v~vwD~~~---------------~~~~~~~~~-h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
++++|+|+| +|++|+.|++|+|||... ++++.++.+ | ...|++++|+| ++..|++++.|+.
T Consensus 198 ~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~~-~~~~l~s~~~d~~ 275 (345)
T 3fm0_A 198 WSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH-SRTIYDIAWCQ-LTGALATACGDDA 275 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSC-SSCEEEEEECT-TTCCEEEEETTSC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCC-CCcEEEEEEec-CCCEEEEEeCCCe
Confidence 999999999 999999999999999632 234455665 6 88999999999 9999999999999
Q ss_pred EEEEECcCCc----ee-----EEEEcCCCe-eeeeEcCCC-CEEEEEeCCCcEEEEECCCCcc
Q 017601 308 VFCGQWRESS----KV-----FAFRGDSNW-LGFSKCSNR-DVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 308 i~vwd~~~~~----~~-----~~~~g~~~~-~~~~~~~d~-~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
|++||..... .. ..+.+|... ..+..+|++ .+|+|||.||+|++|++.+++.
T Consensus 276 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 276 IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 9999987632 11 122467632 334446766 5999999999999999988764
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.7e-32 Score=246.81 Aligned_cols=251 Identities=11% Similarity=0.068 Sum_probs=185.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC-CceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS-QWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~-~~~~~a~ 166 (369)
+.+|.+.|++++|+|++ .+|++++.++.|++|++..... .....+..|. ..+.+++|+|. ++.+|++
T Consensus 5 ~~~h~~~V~~~~~s~~g----~~las~s~D~~v~iw~~~~~~~---~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYG----KRMATCSSDKTIKIFEVEGETH---KLIDTLTGHE-----GPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CCSCSSCEEEEEECTTS----SEEEEEETTSCEEEEEBCSSCB---CCCEEECCCS-----SCEEEEEECCGGGCSEEEE
T ss_pred ccCCcCceEEEEECCCC----CEEEEEeCCCEEEEEecCCCCc---EEEEEEcccc-----CCeEEEEecCCCcCCEEEE
Confidence 56899999999999984 7899999999999999974311 1112233343 34668999874 3567888
Q ss_pred EecccceEEEEeCCcce-EEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 167 ARSFSKSIDVYDQDIHL-RTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~-~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+ +.|++|+|||..... ..+. ...|...+..+.+.|.. ++..|++++.|++|++||++++.. .....+..| ...|
T Consensus 73 ~-s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~~~~h-~~~v 148 (297)
T 2pm7_B 73 C-SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPMLLVASSDGKVSVVEFKENGT-TSPIIIDAH-AIGV 148 (297)
T ss_dssp E-ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEEBCSSSC-BCCEEEECC-SSCE
T ss_pred E-cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC-CCcEEEEEECCCcEEEEEecCCCc-eeeeeeecc-cCcc
Confidence 8 899999999985321 1111 22244455555543311 156888899999999999987621 113445555 5889
Q ss_pred EEEEECCC-------------C-cEEEEeCCCcEEEEeCCCce----eeeeccccccCceEEEEEcCCC---CCEEEEEE
Q 017601 245 YAVCSSST-------------G-NIAVAGADRTVTIYDPRRWS----ALSRWVHCSKYEITGLSFSSID---SNYIYVQG 303 (369)
Q Consensus 245 ~~v~~sp~-------------g-~lasgs~D~~v~vwD~~~~~----~~~~~~~h~~~~v~~l~~sp~d---~~~l~s~s 303 (369)
++++|+|+ + +|++|+.|++|++||+++++ ...++.+| ...|.+++|+| + +.+|+|+|
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v~~sp-~~~~~~~las~s 226 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSP-TVLLRSYMASVS 226 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECC-CCSSSEEEEEEE
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEEEEECC-CCCCceEEEEEE
Confidence 99999997 5 89999999999999998755 56788999 99999999999 7 48999999
Q ss_pred CCCeEEEEECcCCc---eeEEE--EcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 304 VDYEVFCGQWRESS---KVFAF--RGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 304 ~D~~i~vwd~~~~~---~~~~~--~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
.|++|++||+++.. ....+ .+|..+ ..+...+++++|++++.||+|++|+...
T Consensus 227 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999999998742 12222 344422 3445577999999999999999999864
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.3e-31 Score=244.39 Aligned_cols=253 Identities=14% Similarity=0.075 Sum_probs=194.9
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
++.+|++.|++|+|+|++ ..+|+|++.||.|++||+.............+.+|. ..+.+++|+|+ ..++++
T Consensus 33 tL~GH~~~V~~v~~sp~~---~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~-----~~V~~~~~s~d-g~~l~s 103 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQF---PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS-----HFVSDVVISSD-GQFALS 103 (340)
T ss_dssp EECCCSSCEEEEEECTTC---TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS-----SCEEEEEECTT-SSEEEE
T ss_pred EECCccCCEEEEEEeCCC---CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC-----CCEEEEEECCC-CCEEEE
Confidence 467999999999999974 469999999999999999865321111112233332 34678999994 557788
Q ss_pred EecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+ +.|+.|++|+............+......... .+++..+++++.|+.+++||+.... ........+ ...+.+
T Consensus 104 ~-~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~s~s~d~~~~~~d~~~~~--~~~~~~~~~-~~~v~~ 176 (340)
T 4aow_A 104 G-SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKTIKLWNTLGVC--KYTVQDESH-SEWVSC 176 (340)
T ss_dssp E-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSCEEEECTTSCE--EEEECSSSC-SSCEEE
T ss_pred E-cccccceEEeecccceeeeecCCCCceeEEEE---eecCccceeecCCCeEEEEEeCCCc--eEEEEeccc-cCcccc
Confidence 7 89999999998755444333333333333332 2456789999999999999998652 222333344 588999
Q ss_pred EEECCCC---cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 247 VCSSSTG---NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 247 v~~sp~g---~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
++|++++ .+++++.|++|++||+++++.+..+.+| ...|++++|+| ++++|++++.|++|++||+++.+++..+.
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC-CCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeec
Confidence 9999886 6789999999999999999999999999 99999999999 99999999999999999999999999998
Q ss_pred cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 324 GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 324 g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++.....+...+++. +++++.|+.|++||++++.
T Consensus 255 ~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 255 GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTE
T ss_pred CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCe
Confidence 887544555555655 5566679999999998764
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=248.91 Aligned_cols=248 Identities=12% Similarity=0.090 Sum_probs=178.0
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCC-Cc-cccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKD-VD-RLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+|.+.|++++|+|++ .++++++.++.|++|++...... .. .....+..|. ..+.+++|+|+ +.+|+++
T Consensus 56 ~h~~~v~~v~~sp~~----~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~sp~-g~~las~ 125 (330)
T 2hes_X 56 AHKKAIRSVAWRPHT----SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE-----NEVKGVAWSND-GYYLATC 125 (330)
T ss_dssp CCCSCEEEEEECTTS----SEEEEEETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECTT-SCEEEEE
T ss_pred CccCCEEEEEECCCC----CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC-----CcEEEEEECCC-CCEEEEE
Confidence 499999999999984 68999999999999998643110 00 0011222332 34678999994 5678888
Q ss_pred ecccceEEEEeCCc---ceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 168 RSFSKSIDVYDQDI---HLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 168 ~s~d~~i~lwd~~~---~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
+.|++|++||... ....+... .|...+..+.+ +|++..|++++.|++|+|||.+++. ..++..+.+| ...
T Consensus 126 -s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~---~p~~~~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h-~~~ 199 (330)
T 2hes_X 126 -SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW---HPSEALLASSSYDDTVRIWKDYDDD-WECVAVLNGH-EGT 199 (330)
T ss_dssp -ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCC-SSC
T ss_pred -eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE---CCCCCEEEEEcCCCeEEEEECCCCC-eeEEEEccCC-CCc
Confidence 8999999999842 12222222 24455655554 3467789999999999999987541 1466777766 689
Q ss_pred EEEEEECCC--C-cEEEEeCCCcEEEEeCCCc--------eeeeeccc-cccCceEEEEEcCCCCCEEEEEECCCeEEEE
Q 017601 244 LYAVCSSST--G-NIAVAGADRTVTIYDPRRW--------SALSRWVH-CSKYEITGLSFSSIDSNYIYVQGVDYEVFCG 311 (369)
Q Consensus 244 v~~v~~sp~--g-~lasgs~D~~v~vwD~~~~--------~~~~~~~~-h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vw 311 (369)
|++++|+|+ + .|++|+.|++|++||++.+ .....+.+ | ...|++++|++ ++ +|++++.|++|++|
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~-~~-~l~s~~~dg~v~iw 276 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVH-KRQVYNVAWGF-NG-LIASVGADGVLAVY 276 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCC-SSCEEEEEECT-TS-CEEEEETTSCEEEE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccc-ccceEEEEEcC-CC-EEEEEeCCCEEEEE
Confidence 999999999 6 8999999999999998764 45556665 7 89999999998 65 79999999999999
Q ss_pred ECcCCc--eeEEE-EcCCC--eeeeeEcC--CCCEEEEEeCCCcEEEEECCC
Q 017601 312 QWRESS--KVFAF-RGDSN--WLGFSKCS--NRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 312 d~~~~~--~~~~~-~g~~~--~~~~~~~~--d~~~l~sgs~dg~I~iWd~~~ 356 (369)
|..+++ ..... .+|.. ...+...+ ++.+|++|+.||+|++||+++
T Consensus 277 ~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 277 EEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 998764 33333 56762 22344455 688999999999999999864
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-31 Score=269.08 Aligned_cols=286 Identities=13% Similarity=0.072 Sum_probs=204.8
Q ss_pred EEEeCCeEEEEEEeCCchhhhc-CCCccccccCccccc-ccccccCCccceeeEEEEeecCCCCceEEEEEec----CCc
Q 017601 46 YIASGCHLYKLQVMMDDWFVSE-GKDSLLIPEQTPVMD-SSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDS----YGH 119 (369)
Q Consensus 46 ~~as~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~----~g~ 119 (369)
+..-...|..+++.+++.++.. +.++..+-++..... .....+.+|.+.|++++|+|++ ..+++++. .++
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg----~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES----KRIAAVGEGRERFGH 130 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS----CEEEEEECCSSCSEE
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCC----CEEEEEECCCCceeE
Confidence 3344455667777776666644 335544333332211 1223456899999999999984 46665543 268
Q ss_pred EEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeec
Q 017601 120 LIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQ 199 (369)
Q Consensus 120 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~ 199 (369)
|++||.... ...+..|. ..+.+++|+|+++..++++ +.|++|++||............|...+..+.
T Consensus 131 v~~wd~~~~-------~~~l~gh~-----~~v~~v~f~p~~~~~l~s~-s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~ 197 (611)
T 1nr0_A 131 VFLFDTGTS-------NGNLTGQA-----RAMNSVDFKPSRPFRIISG-SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 197 (611)
T ss_dssp EEETTTCCB-------CBCCCCCS-----SCEEEEEECSSSSCEEEEE-ETTSCEEEEETTTBEEEEEECCCSSCEEEEE
T ss_pred EEEeeCCCC-------cceecCCC-----CCceEEEECCCCCeEEEEE-eCCCeEEEEECCCCeEeeeeccccCceEEEE
Confidence 999885322 11222232 3467899999766678888 9999999999764322222223555555555
Q ss_pred cCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee-------ccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCC
Q 017601 200 NLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-------GSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRR 271 (369)
Q Consensus 200 ~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-------~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~ 271 (369)
++|++..|++++.|++|+|||++++ +++..+. +| ...|++++|+|+| +|++|+.|++|++||+++
T Consensus 198 ---fspdg~~las~s~D~~i~lwd~~~g---~~~~~~~~~~~~~~~h-~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 198 ---YNPDGSLFASTGGDGTIVLYNGVDG---TKTGVFEDDSLKNVAH-SGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp ---ECTTSSEEEEEETTSCEEEEETTTC---CEEEECBCTTSSSCSS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ---ECCCCCEEEEEECCCcEEEEECCCC---cEeeeecccccccccc-CCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 3456778999999999999999988 6666663 34 5899999999999 999999999999999998
Q ss_pred ceeee-------------------------------------------eccccccCceEEEEEcCCCCCEEEEEECCCeE
Q 017601 272 WSALS-------------------------------------------RWVHCSKYEITGLSFSSIDSNYIYVQGVDYEV 308 (369)
Q Consensus 272 ~~~~~-------------------------------------------~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i 308 (369)
++.+. .+.+| ...|++++|+| ++++|++++.|++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh-~~~v~~l~~sp-dg~~l~s~s~D~~v 348 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH-NKAITALSSSA-DGKTLFSADAEGHI 348 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC-CCCEEEEEEeC-CCCEEEEEeCCCcE
Confidence 76543 33578 89999999999 99999999999999
Q ss_pred EEEECcCCceeEEE-EcCCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 309 FCGQWRESSKVFAF-RGDSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 309 ~vwd~~~~~~~~~~-~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++||+.++++...+ .+|.... .+... .+..|++++.|+++++|++.++.
T Consensus 349 ~~Wd~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 349 NSWDISTGISNRVFPDVHATMITGIKTT-SKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp EEEETTTCCEEECSSCSCSSCEEEEEEC-TTSCEEEEETTTEEEEECSSSSS
T ss_pred EEEECCCCceeeecccCCcceEEEEEEC-CCCcEEEEEcCCceEEeecCCcc
Confidence 99999998877665 4666322 22223 44578899999999999987653
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.9e-31 Score=241.59 Aligned_cols=245 Identities=15% Similarity=0.157 Sum_probs=189.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|...|.+++|+|++ ..+++++.+|.|++||+.+.. ....+..|. ..+.+++|+|+ ...++++
T Consensus 61 ~~~h~~~v~~~~~~~~~----~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~-----~~v~~~~~~~~-~~~l~s~ 125 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDS----NLLVSASDDKTLKIWDVSSGK-----CLKTLKGHS-----NYVFCCNFNPQ-SNLIVSG 125 (312)
T ss_dssp ECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCC-----EEEEEECCS-----SCEEEEEECSS-SSEEEEE
T ss_pred hccCCCceEEEEEcCCC----CEEEEECCCCEEEEEECCCCc-----EEEEEcCCC-----CCEEEEEEcCC-CCEEEEE
Confidence 56899999999999984 789999999999999997552 112233332 23568999994 5577877
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|++|++||............+...+..+.+ ++++..+++++.|+.|++||++++ +.+..+.......+.++
T Consensus 126 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~ 198 (312)
T 4ery_A 126 -SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFV 198 (312)
T ss_dssp -ETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTC---CEEEEECCSSCCCEEEE
T ss_pred -eCCCcEEEEECCCCEEEEEecCCCCcEEEEEE---cCCCCEEEEEeCCCcEEEEECCCC---ceeeEEeccCCCceEEE
Confidence 89999999998643222222224444544443 345678889999999999999988 66666543325789999
Q ss_pred EECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceE--EEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc
Q 017601 248 CSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEIT--GLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 248 ~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~--~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g 324 (369)
+|+|++ +|++++.|+.|++||+++++.+..+.+| ...+. ...|++.++.+|++++.|+.|++||+++++.+..+.+
T Consensus 199 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 199 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 277 (312)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTTEEEEEECSS-CCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEec-CCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc
Confidence 999999 9999999999999999999999999988 65432 3345543889999999999999999999999999999
Q ss_pred CCCe-eeeeEcCCCCEEEEEe--CCCcEEEEECC
Q 017601 325 DSNW-LGFSKCSNRDVLGGWS--DSGSIFVADVV 355 (369)
Q Consensus 325 ~~~~-~~~~~~~d~~~l~sgs--~dg~I~iWd~~ 355 (369)
|... ..+...+++.+|++++ .|++|++|+..
T Consensus 278 h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 278 HTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred cCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9733 2344467999999997 69999999864
No 31
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4e-32 Score=250.15 Aligned_cols=252 Identities=10% Similarity=0.030 Sum_probs=181.9
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC-CceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS-QWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~-~~~~~a~ 166 (369)
+.+|.+.|++++|+|++ .+|++++.++.|++||+..+.. .....+..|. ..+.+++|+|. ++.+|++
T Consensus 9 ~~~H~~~V~~v~~s~~g----~~lasgs~D~~v~lwd~~~~~~---~~~~~l~gH~-----~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYG----TRLATCSSDRSVKIFDVRNGGQ---ILIADLRGHE-----GPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp -----CCEEEEEECGGG----CEEEEEETTTEEEEEEEETTEE---EEEEEEECCS-----SCEEEEEECCGGGSSCEEE
T ss_pred cccccCeEEEeeEcCCC----CEEEEEeCCCeEEEEEecCCCc---EEEEEEcCCC-----ccEEEEEeCCCCCCCEEEE
Confidence 56899999999999983 7899999999999999975411 0112233343 34668999863 3567888
Q ss_pred EecccceEEEEeCCcc--eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 167 ARSFSKSIDVYDQDIH--LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+ +.|++|++||.... ........|...+..+.+.|.. ++..|++++.|++|++||++.+........+..| ...|
T Consensus 77 ~-s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h-~~~v 153 (316)
T 3bg1_A 77 C-SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD-YGLILACGSSDGAISLLTYTGEGQWEVKKINNAH-TIGC 153 (316)
T ss_dssp E-ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT-TCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS-SSCB
T ss_pred E-ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC-CCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc-cCCc
Confidence 8 99999999998642 1222222344445555543321 1567888999999999999875211112334444 5789
Q ss_pred EEEEECCC-----------------C-cEEEEeCCCcEEEEeCCCc---eeeeeccccccCceEEEEEcCCCC----CEE
Q 017601 245 YAVCSSST-----------------G-NIAVAGADRTVTIYDPRRW---SALSRWVHCSKYEITGLSFSSIDS----NYI 299 (369)
Q Consensus 245 ~~v~~sp~-----------------g-~lasgs~D~~v~vwD~~~~---~~~~~~~~h~~~~v~~l~~sp~d~----~~l 299 (369)
++++|+|+ + +|++|+.|++|++||++.. +++.++.+| ...|.+++|+| ++ .+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h-~~~V~~v~~sp-~~~~~~~~l 231 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH-SDWVRDVAWAP-SIGLPTSTI 231 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC-SSCEEEEECCC-CSSCSCCEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC-CCceEEEEecC-CCCCCCceE
Confidence 99999997 5 8999999999999999754 567889999 99999999999 75 889
Q ss_pred EEEECCCeEEEEECcCC---c-eeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 300 YVQGVDYEVFCGQWRES---S-KVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 300 ~s~s~D~~i~vwd~~~~---~-~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
+|+|.|++|++||+++. + ....+.+|... ..+...+++.+|++++.||+|++|+...
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999999999999762 1 22344555522 3455578999999999999999999763
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-31 Score=269.33 Aligned_cols=250 Identities=17% Similarity=0.155 Sum_probs=196.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++|+|+|++ ..+|++++.+|.|++|++.............+..|. ..+.+++|+| ++.+++++
T Consensus 378 l~~H~~~V~~v~~~~~~---~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~s~-~g~~l~sg 448 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDN---ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS-----HFVEDVVLSS-DGQFALSG 448 (694)
T ss_dssp EECCSSCEEEEECCTTC---CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS-----SCEEEEEECT-TSSEEEEE
T ss_pred cccCCceeEEEEecCCC---CCEEEEEeCCCcEEEEEccCCCcccccccceecCCC-----CcEEEEEECC-CCCEEEEE
Confidence 45899999999999874 469999999999999999764221111112233333 3466899999 45678887
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee----eccCCCc
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI----CGSVGDI 243 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~----~~~~~~~ 243 (369)
+.|++|+|||............|...+..+.+ ++++..|++++.|++|+|||.... +...+ .+| ...
T Consensus 449 -s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~s~D~~i~iwd~~~~----~~~~~~~~~~~h-~~~ 519 (694)
T 3dm0_A 449 -SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF---SLDNRQIVSASRDRTIKLWNTLGE----CKYTISEGGEGH-RDW 519 (694)
T ss_dssp -ETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSCEEEECTTSC----EEEEECSSTTSC-SSC
T ss_pred -eCCCcEEEEECCCCcceeEEeCCCCCEEEEEE---eCCCCEEEEEeCCCEEEEEECCCC----cceeeccCCCCC-CCc
Confidence 89999999998654333333345555655553 356789999999999999998654 22222 223 578
Q ss_pred EEEEEECCCC---cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeE
Q 017601 244 LYAVCSSSTG---NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVF 320 (369)
Q Consensus 244 v~~v~~sp~g---~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~ 320 (369)
|.+++|+|++ .|++|+.|++|++||+++++...++.+| ...|++++|+| ++++|++++.|++|++||+++++++.
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEE
Confidence 9999999987 6999999999999999999999999999 99999999999 99999999999999999999999888
Q ss_pred EEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 321 AFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 321 ~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
.+..+.....+..++++.+|++++ |+.|++||+++++
T Consensus 598 ~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 598 SLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp CCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred EecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence 887776555566677888888776 4569999998875
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.3e-31 Score=244.72 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=179.6
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|++++|+|++ .++++++.++.|++||+.++. ....+..|. ..+.+++|+|+ ...+++
T Consensus 71 ~l~~h~~~V~~~~~~~~~----~~l~s~s~D~~v~lwd~~~~~-----~~~~~~~h~-----~~v~~v~~sp~-~~~l~s 135 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQEN----CFAISSSWDKTLRLWDLRTGT-----TYKRFVGHQ-----SEVYSVAFSPD-NRQILS 135 (343)
T ss_dssp EECCCSSCEEEEEECSST----TEEEEEETTSEEEEEETTSSC-----EEEEEECCC-----SCEEEEEECSS-TTEEEE
T ss_pred hhccCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCc-----EEEEEcCCC-----CcEEEEEECCC-CCEEEE
Confidence 357899999999999974 689999999999999997652 112233332 24668999995 456777
Q ss_pred EecccceEEEEeCCcceE-EEEe-eeCCcceeeeccCCCC-------CCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 167 ARSFSKSIDVYDQDIHLR-TLRT-LWYPSSLNFVQNLSPV-------NGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~-~~~~-~~~~~~v~~~~~~~~~-------~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
+ +.|++|++||...... .... ..+...+..+.+.+.. +.+..+++++.|++|++||.+ . +....+.
T Consensus 136 ~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~---~~~~~~~ 210 (343)
T 2xzm_R 136 A-GAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-F---QIRYTFK 210 (343)
T ss_dssp E-ETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-T---EEEEEEE
T ss_pred E-cCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-C---ceeEEEc
Confidence 7 8999999999863221 1110 1233334444433221 123578889999999999943 3 4566676
Q ss_pred ccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCC-ceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 238 GSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRR-WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 238 ~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~-~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
.| ...|++++|+|+| +|++|+.|++|++||+++ ..+...+ .+ ...|.+++|+| ++.+++ ++.|+.|++||+.+
T Consensus 211 ~h-~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~-~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 211 AH-ESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF-DA-GSTINQIAFNP-KLQWVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp CC-SSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE-EC-SSCEEEEEECS-SSCEEE-EEESSCEEEEESSS
T ss_pred Cc-cccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee-cC-CCcEEEEEECC-CCCEEE-EECCCCEEEEEeCC
Confidence 66 6899999999999 999999999999999955 3344444 34 56799999999 888776 55688999999987
Q ss_pred CceeE--EEE-----------cCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 316 SSKVF--AFR-----------GDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 316 ~~~~~--~~~-----------g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++... .+. +|.. ...+...+++.+|++|+.||+|++|+++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 286 QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 65443 333 4542 2344557799999999999999999998764
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.2e-30 Score=235.10 Aligned_cols=252 Identities=12% Similarity=0.096 Sum_probs=193.8
Q ss_pred ccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 85 MLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 85 ~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
.+...+|.+.|.+++|+|++ .++++++ +|.+++|++................+ ...+.+++|+|+ ...+
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~----~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~-~~~l 112 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPT----RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNR-----DNYIRSCKLLPD-GCTL 112 (337)
T ss_dssp EEEEECCSSCCCEEEECSSS----SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCT-----TSBEEEEEECTT-SSEE
T ss_pred cceeccCCCceEEEEEecCC----cEEEEcC-CCeEEEEECCCCCceeeeecccccCC-----CCcEEEEEEcCC-CCEE
Confidence 33456899999999999984 6788877 89999999986532111111111112 234778999994 5577
Q ss_pred EEEecccceEEEEeCCcce--EEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 165 AVARSFSKSIDVYDQDIHL--RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
+++ +.|+.|++||..... .......+...+..+.+ ++++..+++++.|+.|++||++++ +.+..+..+ ..
T Consensus 113 ~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~v~~~d~~~~---~~~~~~~~~-~~ 184 (337)
T 1gxr_A 113 IVG-GEASTLSIWDLAAPTPRIKAELTSSAPACYALAI---SPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGH-TD 184 (337)
T ss_dssp EEE-ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTT---EEEEEECCC-SS
T ss_pred EEE-cCCCcEEEEECCCCCcceeeecccCCCceEEEEE---CCCCCEEEEEeCCCcEEEEeCCCC---ceeeeeecc-cC
Confidence 777 899999999986432 22222234444444443 245678888999999999999988 777777765 68
Q ss_pred cEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 243 ILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
.|.+++|+|++ .|++++.|+.|++||+++++.+..+. | ...+.+++|+| ++++|++++.|+.|++||+++++.. .
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~-~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~-~ 260 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-F-TSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-Q 260 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-C-SSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-E
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-C-CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeE-E
Confidence 99999999999 99999999999999999998887765 5 68899999999 9999999999999999999987654 4
Q ss_pred EEcCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 322 FRGDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 322 ~~g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+.+|.. ...+...+++++|++++.||.|++||+.+++.
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 556652 23444577999999999999999999998764
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-31 Score=255.92 Aligned_cols=249 Identities=13% Similarity=0.065 Sum_probs=183.8
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
.+|...|++|+|+|.+ ..+||+++.+|.|++||+..... .......+|. +.+.+|+|+|.++.+|+++
T Consensus 116 ~~~~~~V~~l~~~P~~---~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~-----~~V~~l~f~p~~~~~l~s~- 183 (435)
T 4e54_B 116 APFDRRATSLAWHPTH---PSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAG-----GSITGLKFNPLNTNQFYAS- 183 (435)
T ss_dssp EECSSCEEEEEECSSC---TTCEEEEETTSCEEEECSSCCSC---CEEECCCSSS-----CCCCEEEECSSCTTEEEEE-
T ss_pred CCCCCCEEEEEEeCCC---CCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCC-----CCEEEEEEeCCCCCEEEEE-
Confidence 4788999999999963 46899999999999999975521 1112223333 3356899999777788988
Q ss_pred cccceEEEEeCCcce-EEEEeee-CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 169 SFSKSIDVYDQDIHL-RTLRTLW-YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 169 s~d~~i~lwd~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|++|++||+.... +.+.... ....+..+. +++++..|++++.|++|++||++. +.+..+..| ...|++
T Consensus 184 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~g~~dg~i~~wd~~~----~~~~~~~~h-~~~v~~ 255 (435)
T 4e54_B 184 SMEGTTRLQDFKGNILRVFASSDTINIWFCSLD---VSASSRMVVTGDNVGNVILLNMDG----KELWNLRMH-KKKVTH 255 (435)
T ss_dssp CSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE---EETTTTEEEEECSSSBEEEEESSS----CBCCCSBCC-SSCEEE
T ss_pred eCCCEEEEeeccCCceeEEeccCCCCccEEEEE---ECCCCCEEEEEeCCCcEeeeccCc----ceeEEEecc-cceEEe
Confidence 999999999986433 2222211 111112222 234677888899999999999975 456666666 689999
Q ss_pred EEECCCC--cEEEEeCCCcEEEEeCCCceeeee---ccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 247 VCSSSTG--NIAVAGADRTVTIYDPRRWSALSR---WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 247 v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~---~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
++|+|++ +|++|+.|++|+|||+++.+.... ..+| ...|++++|+| ++++|++++.|++|++||++++++...
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH-RHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC-SSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEeeec-cccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceE
Confidence 9999998 788999999999999998665443 3578 89999999999 999999999999999999999888888
Q ss_pred EEcCCCee-------eeeEcCCCCEEEEEe------------CCCcEEEEECCCCcc
Q 017601 322 FRGDSNWL-------GFSKCSNRDVLGGWS------------DSGSIFVADVVAKEN 359 (369)
Q Consensus 322 ~~g~~~~~-------~~~~~~d~~~l~sgs------------~dg~I~iWd~~~~~~ 359 (369)
+.+|.... .....+++.++++++ .++.|++||..+++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 76664110 111123455555543 346899999998864
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-30 Score=256.70 Aligned_cols=235 Identities=19% Similarity=0.228 Sum_probs=189.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|...|.+++|+|++ ..+++++.+|.+++|+.... ....+..|. ..+.+++|+|+ ...++++
T Consensus 340 ~~~~~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~~~~------~~~~~~~~~-----~~v~~~~~s~d-g~~l~~~ 403 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDG----QTIASASDDKTVKLWNRNGQ------LLQTLTGHS-----SSVRGVAFSPD-GQTIASA 403 (577)
T ss_dssp ECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTCC------EEEEEECCS-----SCEEEEEECTT-SSCEEEE
T ss_pred EeCCCCCEEEEEECCCC----CEEEEEeCCCEEEEEcCCCC------EEEEecCCC-----CCeEEEEECCC-CCEEEEE
Confidence 56899999999999984 68999999999999996422 112222232 34678999995 5577887
Q ss_pred ecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 168 RSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 168 ~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|+.|++||... ..+.+. .+...+..+. ++|++..|++++.|++|++||.. + +.+..+..+ ...|++
T Consensus 404 -~~d~~v~~~~~~~~~~~~~~--~~~~~v~~~~---~s~d~~~l~~~~~d~~v~~w~~~-~---~~~~~~~~~-~~~v~~ 472 (577)
T 2ymu_A 404 -SDDKTVKLWNRNGQLLQTLT--GHSSSVWGVA---FSPDDQTIASASDDKTVKLWNRN-G---QLLQTLTGH-SSSVRG 472 (577)
T ss_dssp -ETTSEEEEECTTCCEEEEEE--CCSSCEEEEE---ECTTSSEEEEEETTSEEEEEETT-S---CEEEEEECC-SSCEEE
T ss_pred -eCCCEEEEEeCCCCEEEEec--CCCCCeEEEE---ECCCCCEEEEEcCCCEEEEEECC-C---CEEEEEcCC-CCCEEE
Confidence 8999999999753 333332 2444444444 34567788899999999999964 4 567777766 689999
Q ss_pred EEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 247 VCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 247 v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
++|+|++ +|++++.|++|++||. +++++.++.+| ...|++++|+| ++++|++++.|+.|++||. +++++..+.+|
T Consensus 473 ~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h-~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h 548 (577)
T 2ymu_A 473 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH 548 (577)
T ss_dssp EEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECC-SSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECC
T ss_pred EEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCC-CCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCC
Confidence 9999999 9999999999999994 68889999999 99999999999 9999999999999999995 67889999999
Q ss_pred CCe-eeeeEcCCCCEEEEEeCCCcEEEEE
Q 017601 326 SNW-LGFSKCSNRDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 326 ~~~-~~~~~~~d~~~l~sgs~dg~I~iWd 353 (369)
... ..+..++|+++|+|++.|++|++||
T Consensus 549 ~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 832 2444577999999999999999997
No 37
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-30 Score=244.10 Aligned_cols=260 Identities=12% Similarity=0.077 Sum_probs=193.5
Q ss_pred cCCccceeeEEEEeecCCCCc---eEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEEC----CCC
Q 017601 88 RCPHRSEVQSIALAETDSSGY---MVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFS----PSQ 160 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~---~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----p~~ 160 (369)
+.+|...|.+++|+|+..... ..+++++.+|.|++|++.............+..+........+.+++|+ |++
T Consensus 58 ~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 137 (397)
T 1sq9_A 58 HFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 137 (397)
T ss_dssp EECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----
T ss_pred EecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC
Confidence 458999999999999610013 6899999999999999986532110001122222100002457789999 854
Q ss_pred cee-EEEEecccceEEEEeCCc--------ceE-----EEEe-----eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEE
Q 017601 161 WSM-AAVARSFSKSIDVYDQDI--------HLR-----TLRT-----LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTI 221 (369)
Q Consensus 161 ~~~-~a~~~s~d~~i~lwd~~~--------~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~i 221 (369)
.. ++++ +.|+.|++||... .+. .+.. ..+...+..+.+ ++++ .+++++.|+.|++
T Consensus 138 -~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 138 -SHRLVAT-DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI---SERG-LIATGFNNGTVQI 211 (397)
T ss_dssp -CEEEEEE-ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEE---CTTS-EEEEECTTSEEEE
T ss_pred -ceEEEEE-eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEE---CCCc-eEEEEeCCCcEEE
Confidence 45 7777 8999999998754 222 3322 123333434432 3456 8888889999999
Q ss_pred EeCCcccCCceeeeeec---cC--CCcEEEEEECCCC-cEEEEeCC---CcEEEEeCCCceeeeeccc------------
Q 017601 222 WDLRMKENGGCLHRICG---SV--GDILYAVCSSSTG-NIAVAGAD---RTVTIYDPRRWSALSRWVH------------ 280 (369)
Q Consensus 222 wD~~~~~~~~~~~~~~~---~~--~~~v~~v~~sp~g-~lasgs~D---~~v~vwD~~~~~~~~~~~~------------ 280 (369)
||++++ +.+..+.. +. ...|++++|+|++ +|++++.| +.|++||+++++++..+.+
T Consensus 212 ~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 212 SELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp EETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred EECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence 999987 77777765 10 2889999999999 99999999 9999999999999999998
Q ss_pred -cccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE------cC---------------C-CeeeeeEcCCC
Q 017601 281 -CSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR------GD---------------S-NWLGFSKCSNR 337 (369)
Q Consensus 281 -h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~------g~---------------~-~~~~~~~~~d~ 337 (369)
| ...|++++|+| ++++|++++.|+.|++||+++++++..+. +| . ....+...+++
T Consensus 289 ~~-~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 289 AH-SSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp SB-SSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cc-CCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 9 99999999999 99999999999999999999999999999 76 4 22344446677
Q ss_pred ----------CEEEEEeCCCcEEEEECCCCc
Q 017601 338 ----------DVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 338 ----------~~l~sgs~dg~I~iWd~~~~~ 358 (369)
.+|++++.||.|++||+++++
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-29 Score=236.35 Aligned_cols=248 Identities=15% Similarity=0.128 Sum_probs=183.7
Q ss_pred cCCccceeeEEEE-----ee-cCCCCceEEEEEecCCcEEEEEecCCCCCCc--cccccccCCCCCCCCCCeeEEEECCC
Q 017601 88 RCPHRSEVQSIAL-----AE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDVD--RLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 88 ~~~H~~~V~~l~~-----s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
+.+|.+.|++++| ++ + ..+|++++.++.|++|++........ .....+..|. ..+.+++|+|+
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d----~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~-----~~V~~~~~~~~ 87 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENED----SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN-----HFVSDLALSQE 87 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCC----CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS-----SCEEEEEECSS
T ss_pred eccchhhhhheeeEEEeecCCC----CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC-----CceEEEEECCC
Confidence 5689999999999 55 4 47999999999999999975421100 0111223332 34678999994
Q ss_pred CceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee--
Q 017601 160 QWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-- 237 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-- 237 (369)
..+++++ +.|++|++||............|...+..+.+ +|++..|++++.|++|++||++.. ......
T Consensus 88 -~~~l~s~-s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~---sp~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~ 158 (343)
T 2xzm_R 88 -NCFAISS-SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAF---SPDNRQILSAGAEREIKLWNILGE----CKFSSAEK 158 (343)
T ss_dssp -TTEEEEE-ETTSEEEEEETTSSCEEEEEECCCSCEEEEEE---CSSTTEEEEEETTSCEEEEESSSC----EEEECCTT
T ss_pred -CCEEEEE-cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEE---CCCCCEEEEEcCCCEEEEEeccCC----ceeeeecc
Confidence 5577777 89999999998643222222235555555553 356778999999999999999743 332222
Q ss_pred -ccCCCcEEEEEECCCC-----------cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECC
Q 017601 238 -GSVGDILYAVCSSSTG-----------NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD 305 (369)
Q Consensus 238 -~~~~~~v~~v~~sp~g-----------~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D 305 (369)
.+ ...|.+++|+|++ +|++|+.|++|++|| .+.+....+.+| ...|++++|+| ++++|++++.|
T Consensus 159 ~~~-~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h-~~~v~~~~~s~-~g~~l~sgs~d 234 (343)
T 2xzm_R 159 ENH-SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAH-ESNVNHLSISP-NGKYIATGGKD 234 (343)
T ss_dssp TSC-SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECC-SSCEEEEEECT-TSSEEEEEETT
T ss_pred cCC-CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCc-cccceEEEECC-CCCEEEEEcCC
Confidence 23 5789999999984 699999999999999 456777888999 99999999999 99999999999
Q ss_pred CeEEEEECcC-CceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 306 YEVFCGQWRE-SSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 306 ~~i~vwd~~~-~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++|++||+.. ......+........+...+++.+++++ .|+.|++||+.+++
T Consensus 235 g~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 235 KKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQS 287 (343)
T ss_dssp CEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCC
T ss_pred CeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCC
Confidence 9999999954 4455555433334455567788887655 57889999998765
No 39
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.5e-31 Score=254.72 Aligned_cols=258 Identities=14% Similarity=0.100 Sum_probs=191.1
Q ss_pred CCccceeeEEEEee-cCCCCceEEEEEecCCcEEEEEecCCCCCC-ccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 89 CPHRSEVQSIALAE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDV-DRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 89 ~~H~~~V~~l~~s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+|.+.|++++|+| ++ .++++++.+|.|++||+....... ....... .| ...+.+++|+| +...+++
T Consensus 60 ~~h~~~V~~~~~s~~~~----~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h-----~~~v~~~~~~~-~~~~l~s 128 (437)
T 3gre_A 60 ENEPNSITSSAVSPGET----PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DC-----SSTVTQITMIP-NFDAFAV 128 (437)
T ss_dssp TTTTSCEEEEEEECSSS----CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-EC-----SSCEEEEEECT-TSSEEEE
T ss_pred cCCCCceEEEEECCCCC----CEEEEecCCceEEEeECcccccCcccceeeec-cC-----CCCEEEEEEeC-CCCEEEE
Confidence 67999999999999 73 799999999999999987521000 0001111 12 23577999999 5567888
Q ss_pred EecccceEEEEeCC-----cceEEEEe-----ee-----CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc
Q 017601 167 ARSFSKSIDVYDQD-----IHLRTLRT-----LW-----YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG 231 (369)
Q Consensus 167 ~~s~d~~i~lwd~~-----~~~~~~~~-----~~-----~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~ 231 (369)
+ +.|++|++||.. +..+.+.. .. +...+..+... +.+++..+++++.|++|++||++++ +
T Consensus 129 ~-s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~---~ 203 (437)
T 3gre_A 129 S-SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAF-VNEEKSLLVALTNLSRVIIFDIRTL---E 203 (437)
T ss_dssp E-ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEE-ECSSCEEEEEEETTSEEEEEETTTC---C
T ss_pred E-eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEE-EcCCCCEEEEEeCCCeEEEEeCCCC---e
Confidence 7 899999999873 11211111 00 11111111100 2245678888999999999999988 7
Q ss_pred eeeeeec--cCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecc-ccccCceEEEEEcCC---CCCEEEEEEC
Q 017601 232 CLHRICG--SVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSI---DSNYIYVQGV 304 (369)
Q Consensus 232 ~~~~~~~--~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~---d~~~l~s~s~ 304 (369)
++..+.. + ...|++++|+|++ +|++|+.||+|++||+++++++.++. .| ...|++++|+|. ++.+|++++.
T Consensus 204 ~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 204 RLQIIENSPR-HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD-HAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp EEEEEECCGG-GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT-CEEEEEEEECTTTCTTEEEEEEEST
T ss_pred eeEEEccCCC-CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC-CCceEEEEeccccCCCccEEEEEcC
Confidence 8888775 4 5899999999999 99999999999999999999999886 77 789999966541 6779999999
Q ss_pred CCeEEEEECcCCceeEEEEcCCCeee---------------------------eeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 305 DYEVFCGQWRESSKVFAFRGDSNWLG---------------------------FSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 305 D~~i~vwd~~~~~~~~~~~g~~~~~~---------------------------~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
|++|++||+++++++..+.+|..... +... ++.+|++|+.||.|++||+.++
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 99999999999999999987742111 1112 5689999999999999999988
Q ss_pred cchhhhccc
Q 017601 358 ENEISALKG 366 (369)
Q Consensus 358 ~~~~~~l~g 366 (369)
+. ...+.+
T Consensus 361 ~~-~~~~~~ 368 (437)
T 3gre_A 361 SS-SKAVIS 368 (437)
T ss_dssp GG-CEEEEC
T ss_pred cc-ceEEec
Confidence 64 344444
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=7.6e-30 Score=235.25 Aligned_cols=283 Identities=13% Similarity=0.066 Sum_probs=201.1
Q ss_pred CeEEEEEEeCC-chhh-hcCCCccccccCccccc----ccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEE
Q 017601 51 CHLYKLQVMMD-DWFV-SEGKDSLLIPEQTPVMD----SSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSK 124 (369)
Q Consensus 51 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~ 124 (369)
..|..+++.+. +.++ ..+.++.++.++..... .....+.+|.+.|.+++|+|++ ..+++++.+|.+++|+
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg----~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG----QFALSGSWDGTLRLWD 114 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC----CEEEEEcccccceEEe
Confidence 34555666554 3333 44555554433332111 1222357899999999999984 7899999999999999
Q ss_pred ecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEE-EeeeCCcceeeeccCCC
Q 017601 125 LDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTL-RTLWYPSSLNFVQNLSP 203 (369)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~-~~~~~~~~v~~~~~~~~ 203 (369)
...... ......+ ......+.+++. ...++++ +.|+.+++||........ ....+...+..+.+.+.
T Consensus 115 ~~~~~~-----~~~~~~~-----~~~~~~~~~~~~-~~~l~s~-s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 115 LTTGTT-----TRRFVGH-----TKDVLSVAFSSD-NRQIVSG-SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp TTTTEE-----EEEEECC-----SSCEEEEEECTT-SSCEEEE-ETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ecccce-----eeeecCC-----CCceeEEEEeec-Cccceee-cCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 875411 1111111 112346788884 4577877 899999999986443322 22223444444443322
Q ss_pred CCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc
Q 017601 204 VNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS 282 (369)
Q Consensus 204 ~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~ 282 (369)
+....+++++.|++|++||++++ +.+..+..+ ...|++++|+|++ +|++|+.|++|++||+++.+++..+..+
T Consensus 183 -~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~- 256 (340)
T 4aow_A 183 -SSNPIIVSCGWDKLVKVWNLANC---KLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG- 256 (340)
T ss_dssp -SSSCEEEEEETTSCEEEEETTTT---EEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-
T ss_pred -CCCcEEEEEcCCCEEEEEECCCC---ceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-
Confidence 22346778889999999999988 777777766 6899999999999 9999999999999999999999988866
Q ss_pred cCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE---------cCCC-eeeeeEcCCCCEEEEEeCCCcEEEE
Q 017601 283 KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR---------GDSN-WLGFSKCSNRDVLGGWSDSGSIFVA 352 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~---------g~~~-~~~~~~~~d~~~l~sgs~dg~I~iW 352 (369)
..|.++.|+| ++.+ ++++.|+.|++||++++..+..+. +|.. ...+..++|+++|++|+.||.|+||
T Consensus 257 -~~v~~~~~~~-~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 257 -DIINALCFSP-NRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 333 (340)
T ss_dssp -SCEEEEEECS-SSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -ceEEeeecCC-CCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 6899999999 7654 566789999999999877666654 3442 1234446799999999999999999
Q ss_pred ECCCCc
Q 017601 353 DVVAKE 358 (369)
Q Consensus 353 d~~~~~ 358 (369)
|+++|.
T Consensus 334 ~~~tGt 339 (340)
T 4aow_A 334 QVTIGT 339 (340)
T ss_dssp EEEC--
T ss_pred eCCCcC
Confidence 999885
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.98 E-value=2.1e-29 Score=231.55 Aligned_cols=242 Identities=14% Similarity=0.105 Sum_probs=190.1
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
.+|...|.+++|+|++ ..+++++.+|.|++|++..... .....+..+ ...+.+++|+|+ ...++++
T Consensus 94 ~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~-----~~~i~~~~~~~~-~~~l~~~- 159 (337)
T 1gxr_A 94 LNRDNYIRSCKLLPDG----CTLIVGGEASTLSIWDLAAPTP---RIKAELTSS-----APACYALAISPD-SKVCFSC- 159 (337)
T ss_dssp SCTTSBEEEEEECTTS----SEEEEEESSSEEEEEECCCC-----EEEEEEECS-----SSCEEEEEECTT-SSEEEEE-
T ss_pred cCCCCcEEEEEEcCCC----CEEEEEcCCCcEEEEECCCCCc---ceeeecccC-----CCceEEEEECCC-CCEEEEE-
Confidence 3799999999999974 6888999999999999986521 011222222 223668999994 5577777
Q ss_pred cccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEE
Q 017601 169 SFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVC 248 (369)
Q Consensus 169 s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~ 248 (369)
+.|+.|++||............+...+..+.+ ++++..+++++.|+.|++||++++ +.+..+.+. ..+.+++
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~--~~v~~~~ 231 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI---SNDGTKLWTGGLDNTVRSWDLREG---RQLQQHDFT--SQIFSLG 231 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETTTT---EEEEEEECS--SCEEEEE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEE---CCCCCEEEEEecCCcEEEEECCCC---ceEeeecCC--CceEEEE
Confidence 89999999998643222222224445555553 345678889999999999999988 777777765 8899999
Q ss_pred ECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCC
Q 017601 249 SSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSN 327 (369)
Q Consensus 249 ~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~ 327 (369)
|+|++ .|++++.|+.|++||+++++. ..+..| ...|++++|+| ++++|++++.|+.|++||+.+++.+........
T Consensus 232 ~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~-~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 232 YCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLH-ESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 308 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSSCE-EEECCC-SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCC-ccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEecCCCc
Confidence 99999 999999999999999998765 467788 89999999999 999999999999999999999888766654443
Q ss_pred eeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 328 WLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 328 ~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
...+...+++++|++++.||.|++|++.
T Consensus 309 v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 3455557799999999999999999963
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.2e-30 Score=247.52 Aligned_cols=257 Identities=14% Similarity=0.149 Sum_probs=199.0
Q ss_pred ccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 85 MLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 85 ~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
.+....|.+.|++++|+|++ .++++++.+|.|++|++....... .....+..|. ..+.+++|+|+++.++
T Consensus 60 ~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~vw~~~~~~~~~-~~~~~~~~h~-----~~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSHNN----KIIAGALDNGSLELYSTNEANNAI-NSMARFSNHS-----SSVKTVKFNAKQDNVL 129 (416)
T ss_dssp CSCCCCCSSCEEEEEECSSS----SCEEEEESSSCEEEECCSSTTSCC-CEEEECCCSS-----SCCCEEEECSSSTTBE
T ss_pred EEEEEecCCceEEEEECCCC----CeEEEEccCCeEEEeecccccccc-cchhhccCCc-----cceEEEEEcCCCCCEE
Confidence 34456799999999999984 688999999999999998631111 1122233333 2355899999757788
Q ss_pred EEEecccceEEEEeCCcce------EEEEe---eeCCcceeeeccCCCCCC-CCcEEEEEcCCeEEEEeCCcccCCceee
Q 017601 165 AVARSFSKSIDVYDQDIHL------RTLRT---LWYPSSLNFVQNLSPVNG-GPNMLAVTEGCQLTIWDLRMKENGGCLH 234 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~~------~~~~~---~~~~~~v~~~~~~~~~~~-~~~lla~s~d~~v~iwD~~~~~~~~~~~ 234 (369)
+++ +.|++|++||..... ..+.. ..+...+..+.+ +++ +..+++++.|+.|++||++++ +.+.
T Consensus 130 ~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~ 202 (416)
T 2pm9_A 130 ASG-GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW---NQSLAHVFASAGSSNFASIWDLKAK---KEVI 202 (416)
T ss_dssp EEE-CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE---CSSCTTEEEEESSSSCEEEEETTTT---EEEE
T ss_pred EEE-cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe---CCCCCcEEEEEcCCCCEEEEECCCC---Ccce
Confidence 888 899999999986432 22211 123344444443 234 456777889999999999988 6777
Q ss_pred eeeccC-----CCcEEEEEECCCC--cEEEEeCCC---cEEEEeCCCc-eeeeecc-ccccCceEEEEEcCCCCCEEEEE
Q 017601 235 RICGSV-----GDILYAVCSSSTG--NIAVAGADR---TVTIYDPRRW-SALSRWV-HCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 235 ~~~~~~-----~~~v~~v~~sp~g--~lasgs~D~---~v~vwD~~~~-~~~~~~~-~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
.+..+. ...|++++|+|++ +|++++.|+ .|++||++++ .++..+. +| ...|++++|+|.++.+|+++
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH-QKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC-SSCEEEEEECSSCSSCEEEE
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc-cCceeEEEeCCCCCCeEEEE
Confidence 666431 3789999999997 899999999 9999999986 6778888 89 99999999999788999999
Q ss_pred ECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCC-CEEEEEeCCCcEEEEECCCCcc
Q 017601 303 GVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNR-DVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~-~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+.|++|++||+++++++..+.+|... ..+..++++ .+|++++.||.|++||+.+++.
T Consensus 282 ~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 282 GRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred eCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999999999999999999998733 244456777 8999999999999999988754
No 43
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=2.1e-29 Score=237.70 Aligned_cols=260 Identities=19% Similarity=0.161 Sum_probs=194.7
Q ss_pred cCCccceeeEEEEee-cCCCCceEEEEEecCCcEEEEEecCCCCCCccccc---cccCCCCCCCCCCeeEEEECCCCcee
Q 017601 88 RCPHRSEVQSIALAE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTY---SVLPQDCGVGEGSWSGLCFSPSQWSM 163 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~p~~~~~ 163 (369)
+.+|.+.|++++|+| + ...+++++.+|.|++|++............ .............+.+++|+|.+..+
T Consensus 39 ~~~h~~~v~~~~~s~~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVE----GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp CCCCSSCEEEEEECTTT----CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeccCCcEEEEEEecCC----CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 567999999999999 6 379999999999999999865321110000 00000111123457899999977778
Q ss_pred EEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 164 AAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 164 ~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
++++ +.|+.|++||....... ........+..+.+.+.++++..+++++.|+.|++||++++ +.+..+..+ ...
T Consensus 115 l~s~-~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~-~~~ 188 (408)
T 4a11_B 115 FTSS-SFDKTLKVWDTNTLQTA-DVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG---SCSHILQGH-RQE 188 (408)
T ss_dssp EEEE-ETTSEEEEEETTTTEEE-EEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS---CCCEEECCC-CSC
T ss_pred EEEE-eCCCeEEEeeCCCCccc-eeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc---ceeeeecCC-CCc
Confidence 8888 89999999998643222 22234444555555555566668888999999999999988 677777765 689
Q ss_pred EEEEEECCCC-c-EEEEeCCCcEEEEeCCCce-eeeec---------------cccccCceEEEEEcCCCCCEEEEEECC
Q 017601 244 LYAVCSSSTG-N-IAVAGADRTVTIYDPRRWS-ALSRW---------------VHCSKYEITGLSFSSIDSNYIYVQGVD 305 (369)
Q Consensus 244 v~~v~~sp~g-~-lasgs~D~~v~vwD~~~~~-~~~~~---------------~~h~~~~v~~l~~sp~d~~~l~s~s~D 305 (369)
|++++|+|++ . |++|+.|+.|++||++++. ++..+ .+| ...|++++|+| ++++|++++.|
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d 266 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH-NGKVNGLCFTS-DGLHLLTVGTD 266 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC-SSCEEEEEECT-TSSEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc-cCceeEEEEcC-CCCEEEEecCC
Confidence 9999999999 4 8999999999999998765 33343 567 89999999999 99999999999
Q ss_pred CeEEEEECcCC-----------------------------------------------ceeEEEEcCCCe-eeeeEcCCC
Q 017601 306 YEVFCGQWRES-----------------------------------------------SKVFAFRGDSNW-LGFSKCSNR 337 (369)
Q Consensus 306 ~~i~vwd~~~~-----------------------------------------------~~~~~~~g~~~~-~~~~~~~d~ 337 (369)
+.|++||++++ +++..+.+|... ..+...+++
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 99999998753 345566667622 234446799
Q ss_pred CEEEEEeCCCcEEEEECCCCcc
Q 017601 338 DVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 338 ~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.+|++|+.||.|++||+.+++.
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp TEEEEEETTSCEEEEEECC---
T ss_pred CEEEEECCCCeEEEEeCCCCCc
Confidence 9999999999999999988764
No 44
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=3.1e-30 Score=237.17 Aligned_cols=251 Identities=15% Similarity=0.119 Sum_probs=191.0
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC-CceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS-QWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~-~~~~~a~ 166 (369)
+.+|.+.|++++|+|++ ..+++++.+|.|++|++....... .....+..| ...+.+++|+|. ++.++++
T Consensus 7 ~~gH~~~v~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~-----~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYG----RHVATCSSDQHIKVFKLDKDTSNW-ELSDSWRAH-----DSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp ECCCSSCEEEEEECSSS----SEEEEEETTSEEEEEEECSSSCCE-EEEEEEECC-----SSCEEEEEECCGGGCSEEEE
T ss_pred CcccccceeEEEEcCCC----CEEEEeeCCCeEEEEECCCCCCcc-eecceeccC-----CCcEEEEEEcCCCCCCEEEE
Confidence 46899999999999984 689999999999999998652211 111122223 234678999995 3567888
Q ss_pred EecccceEEEEeCCcce--------EEEEee-eCCcceeeeccCCCCCC--CCcEEEEEcCCeEEEEeCCcccCCceeee
Q 017601 167 ARSFSKSIDVYDQDIHL--------RTLRTL-WYPSSLNFVQNLSPVNG--GPNMLAVTEGCQLTIWDLRMKENGGCLHR 235 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~--------~~~~~~-~~~~~v~~~~~~~~~~~--~~~lla~s~d~~v~iwD~~~~~~~~~~~~ 235 (369)
+ +.|++|++||..... +.+... .+...+..+.+. ++ +..+++++.|++|++||+++++ .+..
T Consensus 77 ~-~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~ 149 (351)
T 3f3f_A 77 A-SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA---PAHLGLKLACLGNDGILRLYDALEPS---DLRS 149 (351)
T ss_dssp E-ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEEC---CGGGCSEEEEEETTCEEEEEECSSTT---CTTC
T ss_pred E-cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEc---CCCCCcEEEEecCCCcEEEecCCChH---Hhcc
Confidence 7 899999999975321 222222 344555555543 34 6688889999999999999873 3322
Q ss_pred ee-------------ccCCCcEEEEEECCC---C-cEEEEeCCCcEEEEeCCCcee--eeeccccccCceEEEEEcCCCC
Q 017601 236 IC-------------GSVGDILYAVCSSST---G-NIAVAGADRTVTIYDPRRWSA--LSRWVHCSKYEITGLSFSSIDS 296 (369)
Q Consensus 236 ~~-------------~~~~~~v~~v~~sp~---g-~lasgs~D~~v~vwD~~~~~~--~~~~~~h~~~~v~~l~~sp~d~ 296 (369)
+. .+ ...+++++|+|+ + .+++++.|+.+.+|+...++. +..+.+| ...|++++|+| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~p-~~ 226 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANH-LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH-KSLIRSISWAP-SI 226 (351)
T ss_dssp CEEEEEEESCSCCCSSC-SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC-CSCEEEEEECC-CS
T ss_pred ccccccccccccccCCc-ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC-CcceeEEEECC-CC
Confidence 21 22 478999999997 6 999999999998888877654 7788899 99999999999 87
Q ss_pred ----CEEEEEECCCeEEEEECcCC----------------------------------------------ceeEEEEcCC
Q 017601 297 ----NYIYVQGVDYEVFCGQWRES----------------------------------------------SKVFAFRGDS 326 (369)
Q Consensus 297 ----~~l~s~s~D~~i~vwd~~~~----------------------------------------------~~~~~~~g~~ 326 (369)
++|++++.|+.|++||++.+ +++..+.+|.
T Consensus 227 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 306 (351)
T 3f3f_A 227 GRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN 306 (351)
T ss_dssp SCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTS
T ss_pred CCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc
Confidence 79999999999999999874 5677778887
Q ss_pred Ce-eeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 327 NW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 327 ~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
.. ..+...+++.+|++|+.||.|++||+.+++
T Consensus 307 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 307 GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 32 234446799999999999999999998875
No 45
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=3e-30 Score=239.92 Aligned_cols=245 Identities=13% Similarity=0.107 Sum_probs=187.6
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.|.+.|.+++|+|+....+.++++++.+|.|++||+.+.. ....+..|. ..+.+++|+|.++.+++++ +
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~-----~~i~~~~~~~~~~~~l~s~-~ 135 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-----CIKHYVGHG-----NAINELKFHPRDPNLLLSV-S 135 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-----EEEEEESCC-----SCEEEEEECSSCTTEEEEE-E
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-----EeeeecCCC-----CcEEEEEECCCCCCEEEEE-e
Confidence 4789999999999853335799999999999999987541 112233232 3467899999666778887 8
Q ss_pred ccceEEEEeCCcceEEEEe---eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec--------
Q 017601 170 FSKSIDVYDQDIHLRTLRT---LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG-------- 238 (369)
Q Consensus 170 ~d~~i~lwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~-------- 238 (369)
.|++|++||.......... ..+...+..+.+ ++++..|++++.|+.|++||++++ +.+..+..
T Consensus 136 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 136 KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSK---RMMNAIKESYDYNPNK 209 (366)
T ss_dssp TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEESCSH---HHHHHHHHHHTCCGGG
T ss_pred CCCeEEEEEeecCeEEEEecccccccCceeEEEE---CCCCCEEEEecCCCCEEEEECCCC---ccccccceeEEecCCC
Confidence 9999999998643322222 234455555554 345778999999999999999976 33332221
Q ss_pred --------------------cCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCcee--------------eeecccccc
Q 017601 239 --------------------SVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSA--------------LSRWVHCSK 283 (369)
Q Consensus 239 --------------------~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~--------------~~~~~~h~~ 283 (369)
+ ...|.+++|+ + +|++++.|+.|++||++++.. +..+.+| .
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 285 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIH-RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS-Q 285 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSC-SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS-S
T ss_pred CcccccceeeccCccccccCC-cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccccc-C
Confidence 3 5889999999 5 999999999999999987643 7788889 8
Q ss_pred CceEEEEEcCCC--CCEEEEEECCCeEEEEECcCCc----eeEEEEcC---CCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 284 YEITGLSFSSID--SNYIYVQGVDYEVFCGQWRESS----KVFAFRGD---SNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 284 ~~v~~l~~sp~d--~~~l~s~s~D~~i~vwd~~~~~----~~~~~~g~---~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
..|++++|+| + +++|++++.|+.|++||+++++ ....+.+| .....+..++++++|++++.||.|++||+
T Consensus 286 ~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 286 CDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 9999999999 8 9999999999999999999865 44477777 33344555779999999999999999998
Q ss_pred CC
Q 017601 355 VA 356 (369)
Q Consensus 355 ~~ 356 (369)
.+
T Consensus 365 ~~ 366 (366)
T 3k26_A 365 LR 366 (366)
T ss_dssp --
T ss_pred cC
Confidence 53
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.1e-31 Score=250.11 Aligned_cols=294 Identities=13% Similarity=0.108 Sum_probs=204.5
Q ss_pred CCeEEEEEEeCCchhhhc-CCCccccccCccc---ccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEe
Q 017601 50 GCHLYKLQVMMDDWFVSE-GKDSLLIPEQTPV---MDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKL 125 (369)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~ 125 (369)
...|..+++...+..+.. +.++.+..++... .......+.+|.+.|++++|+|++ ..++++++.+|.|++||+
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ---DNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS---TTBEEEECSSSCEEBCBT
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC---CCEEEEEcCCCeEEEEEC
Confidence 344556666555555432 3344333333322 111333466899999999999973 368999999999999999
Q ss_pred cCCCCCCcc-ccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcc--eEEEEeee----CCcceeee
Q 017601 126 DTSGKDVDR-LTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH--LRTLRTLW----YPSSLNFV 198 (369)
Q Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~--~~~~~~~~----~~~~v~~~ 198 (369)
......... ....+ .........+.+++|+|+++.+++++ +.|+.|++||.... +..+.... +...+..+
T Consensus 144 ~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 144 NKCTESPSNYTPLTP--GQSMSSVDEVISLAWNQSLAHVFASA-GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TTTSSCTTTCCCBCC--CCSCCSSCCCCEEEECSSCTTEEEEE-SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred CCCcccccccccccc--ccccCCCCCeeEEEeCCCCCcEEEEE-cCCCCEEEEECCCCCcceEEeccccccccCCceEEE
Confidence 865311000 00111 00011123456899999767788888 89999999998643 22222211 03445555
Q ss_pred ccCCCCCCC-CcEEEEEcCC---eEEEEeCCcccCCceeeeee-ccCCCcEEEEEECC-CC-cEEEEeCCCcEEEEeCCC
Q 017601 199 QNLSPVNGG-PNMLAVTEGC---QLTIWDLRMKENGGCLHRIC-GSVGDILYAVCSSS-TG-NIAVAGADRTVTIYDPRR 271 (369)
Q Consensus 199 ~~~~~~~~~-~~lla~s~d~---~v~iwD~~~~~~~~~~~~~~-~~~~~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~ 271 (369)
.+. |++ ..+++++.|+ .|++||++++. .++..+. .+ ...|++++|+| ++ +|++++.|++|++||+++
T Consensus 221 ~~~---~~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 221 EWH---PKNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGH-QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp EEC---SSCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCC-SSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred EEC---CCCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCc-cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 433 344 4677788888 99999999863 4555665 44 58999999999 77 999999999999999999
Q ss_pred ceeeeeccccccCceEEEEEcCCCC-CEEEEEECCCeEEEEECcCCceeEEE-----------------Ec---------
Q 017601 272 WSALSRWVHCSKYEITGLSFSSIDS-NYIYVQGVDYEVFCGQWRESSKVFAF-----------------RG--------- 324 (369)
Q Consensus 272 ~~~~~~~~~h~~~~v~~l~~sp~d~-~~l~s~s~D~~i~vwd~~~~~~~~~~-----------------~g--------- 324 (369)
++++.++.+| ...|++++|+| ++ .+|++++.|+.|++||+.+....... .+
T Consensus 295 ~~~~~~~~~~-~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 295 AEQLSQFPAR-GNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp CCEEEEEECS-SSCCCCEEECT-TCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred CccceeecCC-CCceEEEEECC-CCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 9999999999 99999999999 87 89999999999999999875422111 11
Q ss_pred ---------CCCee-eeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 325 ---------DSNWL-GFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 325 ---------~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
|.... .+..++||++|++++.|+.|+||++.+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 22111 3445679999999999999999999865
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=3.8e-30 Score=261.46 Aligned_cols=244 Identities=16% Similarity=0.108 Sum_probs=187.2
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|.+++|+|++ .++++++.+|.|++||+.++. ....+..|. ..+.+++|+|+ ...+++
T Consensus 425 ~~~~h~~~v~~v~~s~~g----~~l~sgs~Dg~v~vwd~~~~~-----~~~~~~~h~-----~~v~~~~~s~~-~~~l~s 489 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDG----QFALSGSWDGELRLWDLAAGV-----STRRFVGHT-----KDVLSVAFSLD-NRQIVS 489 (694)
T ss_dssp EEECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTE-----EEEEEECCS-----SCEEEEEECTT-SSCEEE
T ss_pred eecCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEECCCCc-----ceeEEeCCC-----CCEEEEEEeCC-CCEEEE
Confidence 356899999999999984 799999999999999997541 122233333 24678999994 557788
Q ss_pred EecccceEEEEeCCcc-eEEEEe--eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 167 ARSFSKSIDVYDQDIH-LRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
+ +.|++|++||.... ...+.. ..|...+..+.+.+.+. ...+++++.|++|+|||++++ ++...+.+| ...
T Consensus 490 ~-s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~s~d~~v~vwd~~~~---~~~~~~~~h-~~~ 563 (694)
T 3dm0_A 490 A-SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL-QPTIVSASWDKTVKVWNLSNC---KLRSTLAGH-TGY 563 (694)
T ss_dssp E-ETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS-SCEEEEEETTSCEEEEETTTC---CEEEEECCC-SSC
T ss_pred E-eCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC-cceEEEEeCCCeEEEEECCCC---cEEEEEcCC-CCC
Confidence 7 89999999997532 222211 12334455555433211 246888999999999999987 777888776 689
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
|++++|+|++ +|++|+.|++|++||+++++.+..+..+ ..|.+++|+| ++.+|+++ .|+.|++||+++++++..+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp-~~~~l~~~-~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHALCFSP-NRYWLCAA-TEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--SCEEEEEECS-SSSEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--CcEEEEEEcC-CCcEEEEE-cCCCEEEEECCCCCChhhh
Confidence 9999999999 9999999999999999999998888755 6799999999 88877665 4677999999998887777
Q ss_pred EcCCC--------------------eeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 323 RGDSN--------------------WLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 323 ~g~~~--------------------~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
..+.. ...+..++|+.+|++|+.||+|++|++.
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 640 KVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 54321 1233446799999999999999999985
No 48
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2.6e-29 Score=242.63 Aligned_cols=262 Identities=13% Similarity=0.101 Sum_probs=197.3
Q ss_pred CCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCC
Q 017601 68 GKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVG 147 (369)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (369)
+.++.+..++.+... ....+.+|.+.|.+++|+|++ .+++++.+|.|++||+.++. ....+..|.
T Consensus 139 s~dg~i~vwd~~~~~-~~~~~~~h~~~V~~l~~~~~~-----~l~s~s~dg~i~vwd~~~~~-----~~~~~~~h~---- 203 (464)
T 3v7d_B 139 ADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGG-----ILVSGSTDRTVRVWDIKKGC-----CTHVFEGHN---- 203 (464)
T ss_dssp ETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSTT-----EEEEEETTSCEEEEETTTTE-----EEEEECCCS----
T ss_pred cCCCcEEEEECCCCc-EEEEEeCCCcCEEEEEEcCCC-----EEEEEeCCCCEEEEECCCCc-----EEEEECCCC----
Confidence 344444333433332 233356899999999999872 89999999999999997551 122233332
Q ss_pred CCCeeEEEECCC-CceeEEEEecccceEEEEeCCcceEE----------------------EEe-eeCCcceeeeccCCC
Q 017601 148 EGSWSGLCFSPS-QWSMAAVARSFSKSIDVYDQDIHLRT----------------------LRT-LWYPSSLNFVQNLSP 203 (369)
Q Consensus 148 ~~~~~~l~~~p~-~~~~~a~~~s~d~~i~lwd~~~~~~~----------------------~~~-~~~~~~v~~~~~~~~ 203 (369)
..+.+++|++. +...++++ +.|++|++||....... +.. ..+...+..+.
T Consensus 204 -~~v~~l~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---- 277 (464)
T 3v7d_B 204 -STVRCLDIVEYKNIKYIVTG-SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS---- 277 (464)
T ss_dssp -SCEEEEEEEESSSCEEEEEE-ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE----
T ss_pred -CccEEEEEecCCCCCEEEEE-cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc----
Confidence 34668898863 44677777 89999999998532110 111 11333333333
Q ss_pred CCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc
Q 017601 204 VNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS 282 (369)
Q Consensus 204 ~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~ 282 (369)
+++..+++++.|++|++||++++ +++..+..+ ...|++++|+|++ .+++|+.|++|++||+++++++.++.+|
T Consensus 278 -~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h- 351 (464)
T 3v7d_B 278 -GHGNIVVSGSYDNTLIVWDVAQM---KCLYILSGH-TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH- 351 (464)
T ss_dssp -EETTEEEEEETTSCEEEEETTTT---EEEEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC-
T ss_pred -CCCCEEEEEeCCCeEEEEECCCC---cEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC-
Confidence 35678999999999999999988 788888766 6899999999999 9999999999999999999999999999
Q ss_pred cCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcch
Q 017601 283 KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKENE 360 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~ 360 (369)
...|.++.|++ .+|++++.|++|++||++++.....+........+...+++.+|++|+ ||.|++||+++++..
T Consensus 352 ~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 352 TALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp SSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred CCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 99999999986 899999999999999999987766664332112233356899999999 899999999998753
No 49
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=5.1e-30 Score=245.68 Aligned_cols=257 Identities=11% Similarity=0.123 Sum_probs=188.6
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCC--cc----ccccccCCCCC-------CCCCCeeEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDV--DR----LTYSVLPQDCG-------VGEGSWSGL 154 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~--~~----~~~~~~~~~~~-------~~~~~~~~l 154 (369)
...|.+.|.+++|+|++ .+||+++.+|.|++|++....... .. ....+..|... ..+..+.++
T Consensus 24 ~~~~~~~V~~v~~s~~g----~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSG----ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CCCGGGSEEEEEECSSS----SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred cccccCcEEEEEECCCC----CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEE
Confidence 45688999999999984 799999999999999998653100 00 01122233200 001346689
Q ss_pred EECCCCc-eeEEEEecccceEEEEeCCcceEE--------------------------------------EEe--eeCCc
Q 017601 155 CFSPSQW-SMAAVARSFSKSIDVYDQDIHLRT--------------------------------------LRT--LWYPS 193 (369)
Q Consensus 155 ~~~p~~~-~~~a~~~s~d~~i~lwd~~~~~~~--------------------------------------~~~--~~~~~ 193 (369)
+|+|++. ..++++ +.|++|++||....... .+. ..|..
T Consensus 100 ~~~~~~~~~~l~s~-s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 100 RWLPQKNAAQFLLS-TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EECCCCSSSEEEEE-ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEcCCCCcceEEEe-CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9999653 577777 89999999997531110 001 12334
Q ss_pred ceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee-------eeccCCCcEEEEEECCCC--cEEEEeCCCcE
Q 017601 194 SLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR-------ICGSVGDILYAVCSSSTG--NIAVAGADRTV 264 (369)
Q Consensus 194 ~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~-------~~~~~~~~v~~v~~sp~g--~lasgs~D~~v 264 (369)
.+..+.+ ++++..|+++ .|++|+|||+++.. ..+.. +..+ ...|++++|+|++ +|++|+.|++|
T Consensus 179 ~v~~~~~---~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 179 HINSISI---NSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEEL-TEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CCCEEEE---CTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGC-CCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ceEEEEE---cCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeeccccccccc-CcceEEEEECCCCCcEEEEEeCCCeE
Confidence 4444443 3456677776 89999999999542 34442 3344 5889999999997 89999999999
Q ss_pred EEEeCCCcee----eeeccccccC------------ceEEEEEcCCCCCEEEEEECCCeEEEEECcC-CceeEEEEcCCC
Q 017601 265 TIYDPRRWSA----LSRWVHCSKY------------EITGLSFSSIDSNYIYVQGVDYEVFCGQWRE-SSKVFAFRGDSN 327 (369)
Q Consensus 265 ~vwD~~~~~~----~~~~~~h~~~------------~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~-~~~~~~~~g~~~ 327 (369)
++||+++++. +..+.+| .. .|++++|+| ++++|++++. +.|++||++. ++++..+.+|..
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred EEEECcCCccccceeeEeccC-CCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence 9999999887 6788888 65 899999999 9999999999 9999999997 889999998863
Q ss_pred eee----------------eeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 328 WLG----------------FSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 328 ~~~----------------~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
... +...+++.+|++|+.||.|++||+.+++.
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 222 45577999999999999999999998764
No 50
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=238.62 Aligned_cols=252 Identities=10% Similarity=0.021 Sum_probs=186.6
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEE------EECCCCc
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGL------CFSPSQW 161 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~p~~~ 161 (369)
..+|.+.|.+++|+|+. .+...+++++.+|.|++|++..... ....+..|. ..+.++ +|+| +.
T Consensus 61 ~~~~~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~-----~~v~~~~~~~~~~~s~-~~ 129 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATS-LQQRYLATGDFGGNLHIWNLEAPEM----PVYSVKGHK-----EIINAIDGIGGLGIGE-GA 129 (357)
T ss_dssp EEEESSCEEEEECTTCC-TTTCCEEEEETTSCEEEECTTSCSS----CSEEECCCS-----SCEEEEEEESGGGCC--CC
T ss_pred eecccCcEEEEEEcCCC-CCCceEEEecCCCeEEEEeCCCCCc----cEEEEEecc-----cceEEEeeccccccCC-Cc
Confidence 45799999999999972 1136889999999999999986521 112223332 235567 4567 44
Q ss_pred eeEEEEecccceEEEEeCCc---ceEEEEeeeC--CcceeeeccC-CCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee
Q 017601 162 SMAAVARSFSKSIDVYDQDI---HLRTLRTLWY--PSSLNFVQNL-SPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR 235 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~~---~~~~~~~~~~--~~~v~~~~~~-~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~ 235 (369)
..++++ +.|+.|++||... ....+..... ...+..+.+. .+++++..+++++.|+.|++||++++ +....
T Consensus 130 ~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~ 205 (357)
T 3i2n_A 130 PEIVTG-SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM---ALRWE 205 (357)
T ss_dssp CEEEEE-ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT---EEEEE
T ss_pred cEEEEE-eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC---ceeee
Confidence 577877 8999999999863 3343332221 1133333211 14567778888999999999999987 55555
Q ss_pred eeccCCCcEEEEEECC---CC-cEEEEeCCCcEEEEeCCCceeeeecc-----ccccCceEEEEEcCCCCC-EEEEEECC
Q 017601 236 ICGSVGDILYAVCSSS---TG-NIAVAGADRTVTIYDPRRWSALSRWV-----HCSKYEITGLSFSSIDSN-YIYVQGVD 305 (369)
Q Consensus 236 ~~~~~~~~v~~v~~sp---~g-~lasgs~D~~v~vwD~~~~~~~~~~~-----~h~~~~v~~l~~sp~d~~-~l~s~s~D 305 (369)
..+. ..|++++|+| ++ .|++|+.|+.|++||++++++...+. +| ...|++++|+| ++. +|++++.|
T Consensus 206 ~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~~l~~~~~d 281 (357)
T 3i2n_A 206 TNIK--NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVRHLP-QNRELFLTAGGA 281 (357)
T ss_dssp EECS--SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEEEET-TEEEEEEEEETT
T ss_pred cCCC--CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC-cCCEEEEEECC-CCCcEEEEEeCC
Confidence 5554 8999999999 88 99999999999999999887766655 89 99999999999 888 89999999
Q ss_pred CeEEEEECcCC-------------------ceeEEEEcCCCe-eeeeEcCCCCEEE-EEeCCCcEEEEECCCCc
Q 017601 306 YEVFCGQWRES-------------------SKVFAFRGDSNW-LGFSKCSNRDVLG-GWSDSGSIFVADVVAKE 358 (369)
Q Consensus 306 ~~i~vwd~~~~-------------------~~~~~~~g~~~~-~~~~~~~d~~~l~-sgs~dg~I~iWd~~~~~ 358 (369)
+.|++||++.+ +++..+.+|... ..+...+++.+|+ +++.||.|++||+.+.+
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999999863 356778888732 2344467888888 89999999999998654
No 51
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=5.7e-29 Score=246.44 Aligned_cols=248 Identities=19% Similarity=0.231 Sum_probs=196.6
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.++|.+++|+|++ ..+++++.+|.+++|+..... ...+..+. ..+.+++|+|+ ...++++
T Consensus 299 ~~~h~~~v~~~~~~~~~----~~l~t~~~d~~i~~w~~~~~~------~~~~~~~~-----~~v~~~~~s~~-g~~l~~~ 362 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDG----QTIASASDDKTVKLWNRNGQH------LQTLTGHS-----SSVWGVAFSPD-GQTIASA 362 (577)
T ss_dssp ECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTSCE------EEEECCCS-----SCEEEEEECTT-SSEEEEE
T ss_pred EecCCCCeEEEEECCCC----CEEEEEeCCCeEEEEeCCCCe------eEEEeCCC-----CCEEEEEECCC-CCEEEEE
Confidence 56899999999999984 689999999999999976431 11222222 23568999995 5577877
Q ss_pred ecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 168 RSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 168 ~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|+.|++||... .+..+. .+...+..+. ++|++..|++++.|++|++||.. + +.+..+..+ ...|++
T Consensus 363 -~~dg~v~~~~~~~~~~~~~~--~~~~~v~~~~---~s~dg~~l~~~~~d~~v~~~~~~-~---~~~~~~~~~-~~~v~~ 431 (577)
T 2ymu_A 363 -SDDKTVKLWNRNGQLLQTLT--GHSSSVRGVA---FSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGH-SSSVWG 431 (577)
T ss_dssp -ETTSEEEEEETTCCEEEEEE--CCSSCEEEEE---ECTTSSCEEEEETTSEEEEECTT-C---CEEEEEECC-SSCEEE
T ss_pred -eCCCEEEEEcCCCCEEEEec--CCCCCeEEEE---ECCCCCEEEEEeCCCEEEEEeCC-C---CEEEEecCC-CCCeEE
Confidence 8999999999753 333332 2444454444 34567889999999999999953 4 567777766 689999
Q ss_pred EEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 247 VCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 247 v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
++|+|++ +|++++.|++|++||. +++.+..+.+| ...|++++|+| ++++|++++.|++|++||. +++++..+.+|
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~-~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h 507 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH 507 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECC-SSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECC
T ss_pred EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCC-CCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCC
Confidence 9999999 9999999999999995 57788899999 99999999999 9999999999999999995 67888999999
Q ss_pred CCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccCC
Q 017601 326 SNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 326 ~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
... ..+..++|+++|++++.||.|++||. +++ .+..+.||.
T Consensus 508 ~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~-~~~~~~~h~ 549 (577)
T 2ymu_A 508 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ-LLQTLTGHS 549 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC-EEEEEECCS
T ss_pred CCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCC-EEEEEcCCC
Confidence 732 23444779999999999999999996 443 456677764
No 52
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2e-29 Score=237.33 Aligned_cols=244 Identities=11% Similarity=0.076 Sum_probs=181.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|.+.|.+++|+|++ ...+++++.+|.|++||+.... ...+..+. .....+.+++|+|+ ...++++
T Consensus 114 ~~~h~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~------~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~ 181 (383)
T 3ei3_B 114 GMGPGDAITGMKFNQFN---TNQLFVSSIRGATTLRDFSGSV------IQVFAKTD--SWDYWYCCVDVSVS-RQMLATG 181 (383)
T ss_dssp CCSTTCBEEEEEEETTE---EEEEEEEETTTEEEEEETTSCE------EEEEECCC--CSSCCEEEEEEETT-TTEEEEE
T ss_pred cCCcCCceeEEEeCCCC---CCEEEEEeCCCEEEEEECCCCc------eEEEeccC--CCCCCeEEEEECCC-CCEEEEE
Confidence 45799999999999942 4799999999999999997421 11111111 11234678999995 4577877
Q ss_pred ecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEEeCCcccC-CceeeeeeccCCCcE
Q 017601 168 RSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIWDLRMKEN-GGCLHRICGSVGDIL 244 (369)
Q Consensus 168 ~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iwD~~~~~~-~~~~~~~~~~~~~~v 244 (369)
+.|+.|++||... .+..+ ..+...+..+.+. +++. .+++++.|++|++||+++.+. ..++..+.+. ..|
T Consensus 182 -~~d~~i~i~d~~~~~~~~~--~~h~~~v~~~~~~---~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~v 253 (383)
T 3ei3_B 182 -DSTGRLLLLGLDGHEIFKE--KLHKAKVTHAEFN---PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHE--KPV 253 (383)
T ss_dssp -ETTSEEEEEETTSCEEEEE--ECSSSCEEEEEEC---SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECS--SCE
T ss_pred -CCCCCEEEEECCCCEEEEe--ccCCCcEEEEEEC---CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCC--Cce
Confidence 8999999999853 23332 2344555555543 4455 688889999999999998422 2566666544 899
Q ss_pred EEEEECC-CC-cEEEEeCCCcEEEEeCCCceeeeecccccc-----------------CceEEEEEcCCCCCEEEEEECC
Q 017601 245 YAVCSSS-TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSK-----------------YEITGLSFSSIDSNYIYVQGVD 305 (369)
Q Consensus 245 ~~v~~sp-~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~-----------------~~v~~l~~sp~d~~~l~s~s~D 305 (369)
++++|+| ++ +|++++.|+.|++||+++++....+.+| . ..+..++|+| ++++ +++.|
T Consensus 254 ~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d 329 (383)
T 3ei3_B 254 NAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH-PHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDK 329 (383)
T ss_dssp EEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC-CBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCC
T ss_pred EEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc-cccccccccceEEeccCCCCceEEEecC-Cccc--ccCCC
Confidence 9999999 99 9999999999999999998887777655 3 3344567777 6666 77899
Q ss_pred CeEEEEECcCCceeEEEEcC--CCeeee-eEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 306 YEVFCGQWRESSKVFAFRGD--SNWLGF-SKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 306 ~~i~vwd~~~~~~~~~~~g~--~~~~~~-~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
++|++||+++++++..+.+| ...... ...+++.+|++|+ ||.|++||+++
T Consensus 330 ~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 330 RTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 99999999999999999874 322333 4567999999997 99999999875
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=7.7e-30 Score=240.19 Aligned_cols=254 Identities=13% Similarity=0.061 Sum_probs=191.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++++|+|++ ..++++++.+|.|++|++..... ........| ...+.+++|+|.+...++++
T Consensus 69 ~~~h~~~v~~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTH---PTTVAVGSKGGDIILWDYDVQNK---TSFIQGMGP-----GDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp ECCCSSCEEEEEECSSC---TTEEEEEEBTSCEEEEETTSTTC---EEEECCCST-----TCBEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCEEEEEECCCC---CCEEEEEcCCCeEEEEeCCCccc---ceeeecCCc-----CCceeEEEeCCCCCCEEEEE
Confidence 56899999999999983 26999999999999999985521 111111122 23477899999666788888
Q ss_pred ecccceEEEEeCCc-ceEEEEeee-CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEE
Q 017601 168 RSFSKSIDVYDQDI-HLRTLRTLW-YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILY 245 (369)
Q Consensus 168 ~s~d~~i~lwd~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~ 245 (369)
+.|++|++||... ....+.... +...+..+.+ ++++..|++++.|++|++||++ + +++..+..+ ...|+
T Consensus 138 -~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~i~d~~-~---~~~~~~~~h-~~~v~ 208 (383)
T 3ei3_B 138 -SIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDV---SVSRQMLATGDSTGRLLLLGLD-G---HEIFKEKLH-KAKVT 208 (383)
T ss_dssp -ETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEE---ETTTTEEEEEETTSEEEEEETT-S---CEEEEEECS-SSCEE
T ss_pred -eCCCEEEEEECCCCceEEEeccCCCCCCeEEEEE---CCCCCEEEEECCCCCEEEEECC-C---CEEEEeccC-CCcEE
Confidence 8999999999864 223332211 1233444443 3467788999999999999994 4 677777766 68999
Q ss_pred EEEECCCC--cEEEEeCCCcEEEEeCCC----ceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCcee
Q 017601 246 AVCSSSTG--NIAVAGADRTVTIYDPRR----WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKV 319 (369)
Q Consensus 246 ~v~~sp~g--~lasgs~D~~v~vwD~~~----~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~ 319 (369)
+++|+|++ +|++|+.|++|++||+++ +..+..+ +| ...|++++|+|.++++|++++.|+.|++||+++++..
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~-~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PH-EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-EC-SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cC-CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 99999999 799999999999999998 5566666 68 8999999999988999999999999999999998887
Q ss_pred EEEEcCCCe------------------eeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhccc
Q 017601 320 FAFRGDSNW------------------LGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKG 366 (369)
Q Consensus 320 ~~~~g~~~~------------------~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g 366 (369)
..+.+|... ..+...+++.+ +|+.||.|++||+.+++. +..+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~-~~~l~~ 348 (383)
T 3ei3_B 287 DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL-VHQLRD 348 (383)
T ss_dssp SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE-EEEECB
T ss_pred cccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce-eeeecC
Confidence 777765411 11222345555 778999999999998864 344443
No 54
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=4.5e-29 Score=234.58 Aligned_cols=261 Identities=11% Similarity=0.039 Sum_probs=177.7
Q ss_pred cccCCccceeeEEEEeecC-----CCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC
Q 017601 86 LNRCPHRSEVQSIALAETD-----SSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ 160 (369)
Q Consensus 86 ~~~~~H~~~V~~l~~s~~~-----~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 160 (369)
+.+.+|...|.+++++.+. .++...|+++..++++++|++......+... ...........+..+..++|+|++
T Consensus 67 ~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFL-TSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp EECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEE-EEECSSCCCCTTCCEEEEEECTTS
T ss_pred EEccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEe-eeeceeecCCcccCEEEEEEcCCC
Confidence 3466888999999886540 0001111223457789999987653211110 001111111112235679999965
Q ss_pred ceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee--eec
Q 017601 161 WSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR--ICG 238 (369)
Q Consensus 161 ~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~--~~~ 238 (369)
..+++.+++.|++|+|||........ ...+...+..+. ++|++..+++++ ++.+.+|+..++ ..+.. ...
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~-~~~~~~~V~~v~---fspdg~~l~s~s-~~~~~~~~~~~~---~~~~~~~~~~ 217 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKF-EIETRGEVKDLH---FSTDGKVVAYIT-GSSLEVISTVTG---SCIARKTDFD 217 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEE-EEECSSCCCEEE---ECTTSSEEEEEC-SSCEEEEETTTC---CEEEEECCCC
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEE-EeCCCCceEEEE---EccCCceEEecc-ceeEEEEEeccC---cceeeeecCC
Confidence 54333333689999999987443322 223444444444 345665666665 556777777766 44332 223
Q ss_pred cCCCcEEEEEECCCC-cEEEEeCCC----cEEEEeCCCcee----eeeccccccCceEEEEEcCCCCCEEEEEECCCeEE
Q 017601 239 SVGDILYAVCSSSTG-NIAVAGADR----TVTIYDPRRWSA----LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVF 309 (369)
Q Consensus 239 ~~~~~v~~v~~sp~g-~lasgs~D~----~v~vwD~~~~~~----~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~ 309 (369)
+ ...|++++|+|++ .+++++.|+ ++++||+..... ...+.+| ...|++++||| |+++||+|+.|++|+
T Consensus 218 ~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Sp-dg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 218 K-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDM-KGELAVLASNDNSIA 294 (365)
T ss_dssp T-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECT-TSCEEEEEETTSCEE
T ss_pred C-CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC-CCCeEeEEECC-CCCceEEEcCCCEEE
Confidence 3 5789999999999 999998887 688999876543 3567788 89999999999 999999999999999
Q ss_pred EEECcCCceeEEE-EcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 310 CGQWRESSKVFAF-RGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 310 vwd~~~~~~~~~~-~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|||+++++++..+ .+|... ..+..+|||++|||||.|++|+|||+....
T Consensus 295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 9999999999886 688843 345558899999999999999999997543
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.9e-29 Score=234.56 Aligned_cols=256 Identities=10% Similarity=0.109 Sum_probs=187.9
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC---ceeE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ---WSMA 164 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~---~~~~ 164 (369)
..+|.+.|++++|+|+..++...++++..++.|.+|++..... ...+..+........+.+++|+|+. ..++
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE-----IRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC-----EEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE-----EEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 3489999999999985211224455555566999999985421 1112222222234557899999963 3577
Q ss_pred EEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee---eccCC
Q 017601 165 AVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI---CGSVG 241 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~---~~~~~ 241 (369)
+++ +.|+.|++||............+...+..+.+.+. ++..|++++.|++|++||++++ +.+..+ ..+ .
T Consensus 89 ~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~-~ 161 (366)
T 3k26_A 89 AVA-GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPR--DPNLLLSVSKDHALRLWNIQTD---TLVAIFGGVEGH-R 161 (366)
T ss_dssp EEE-ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSS--CTTEEEEEETTSCEEEEETTTT---EEEEEECSTTSC-S
T ss_pred EEe-cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCC--CCCEEEEEeCCCeEEEEEeecC---eEEEEecccccc-c
Confidence 777 89999999997633222222235555666554331 4568888999999999999988 677666 344 5
Q ss_pred CcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccc----------------------------cccCceEEEEEc
Q 017601 242 DILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVH----------------------------CSKYEITGLSFS 292 (369)
Q Consensus 242 ~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~----------------------------h~~~~v~~l~~s 292 (369)
..|++++|+|++ +|++|+.|+.|++||+++++....+.. | ...|.+++|+
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~ 240 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH-RNYVDCVRWL 240 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC-SSCCCEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC-cceEEEEEEc
Confidence 899999999999 999999999999999998776655544 8 8999999998
Q ss_pred CCCCCEEEEEECCCeEEEEECcCCce--------------eEEEEcCCCe-eeeeEcCC--CCEEEEEeCCCcEEEEECC
Q 017601 293 SIDSNYIYVQGVDYEVFCGQWRESSK--------------VFAFRGDSNW-LGFSKCSN--RDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 293 p~d~~~l~s~s~D~~i~vwd~~~~~~--------------~~~~~g~~~~-~~~~~~~d--~~~l~sgs~dg~I~iWd~~ 355 (369)
+ ++|++++.|+.|++||+++.+. +..+.+|... ..+..+++ +.+|++|+.||.|++||+.
T Consensus 241 ~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 241 G---DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp T---TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred C---CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence 4 7999999999999999987543 7777777621 12222446 9999999999999999999
Q ss_pred CCcc
Q 017601 356 AKEN 359 (369)
Q Consensus 356 ~~~~ 359 (369)
+++.
T Consensus 318 ~~~~ 321 (366)
T 3k26_A 318 VEDP 321 (366)
T ss_dssp SSSG
T ss_pred CCCC
Confidence 8753
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-30 Score=253.66 Aligned_cols=256 Identities=9% Similarity=-0.036 Sum_probs=181.3
Q ss_pred cCCccceeeEEEEeecCC--CCceEEEEEecCCcEEEEEecCCCCC------CccccccccCCCCCCCCCCeeEEEECCC
Q 017601 88 RCPHRSEVQSIALAETDS--SGYMVLGSVDSYGHLIVSKLDTSGKD------VDRLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~--~~~~~las~d~~g~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
+..|.+.|++++|+|+.. ....+||+++.+|.|++||+...... .......+..| ...+.+++|+|.
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h-----~~~v~sv~~s~~ 277 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA-----DSLITTFDFLSP 277 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT-----TTCEEEEEESSS
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC-----CCCEEEEEecCC
Confidence 456789999999999621 12468999999999999999754211 00001112222 245779999983
Q ss_pred CceeEEEEecccceEEEEeCCcceEEEE-eeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 160 QWSMAAVARSFSKSIDVYDQDIHLRTLR-TLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
..|+++ +.|++|++||+........ ...|...+..+.. .+++++ ..|++++.|++|+|||++++ +++..+.
T Consensus 278 --~~lasg-s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~-~~s~~g~~~laS~S~D~tvklWD~~~~---~~~~~~~ 350 (524)
T 2j04_B 278 --TTVVCG-FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVST-AYSDFEDTVVSTVAVDGYFYIFNPKDI---ATTKTTV 350 (524)
T ss_dssp --SEEEEE-ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEE-ECCTTSCCEEEEEETTSEEEEECGGGH---HHHCEEE
T ss_pred --CeEEEE-eCCCEEEEEECCCCCCceEEeecccccEEEEEE-EcCCCCCeEEEEeccCCeEEEEECCCC---Ccccccc
Confidence 368887 9999999999863211111 2234455554420 122444 57888999999999999987 6666665
Q ss_pred ccCC-CcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 238 GSVG-DILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 238 ~~~~-~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
++.. ..|++++|+|++ .+++++.|++|++||++++.++.++.+| ...|++|+||| ++++|+|||.|++|++||+..
T Consensus 351 ~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 351 SRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-ETTITAIGVSR-LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-SSCEEEEECCS-SCCBCEEEETTTEEECCBSCS
T ss_pred cccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-CCceEEEEeCC-CCCeEEEEECCCEEEEEechH
Confidence 4411 358899999999 9999999999999999999988899999 99999999999 999999999999999998643
Q ss_pred C--------------------------------------------ceeEEEEcCCCe-eeeeEcCC---CCEEEEEeCCC
Q 017601 316 S--------------------------------------------SKVFAFRGDSNW-LGFSKCSN---RDVLGGWSDSG 347 (369)
Q Consensus 316 ~--------------------------------------------~~~~~~~g~~~~-~~~~~~~d---~~~l~sgs~dg 347 (369)
. .++..+.+|... ..+..+|+ +.+||+|+.||
T Consensus 429 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g 508 (524)
T 2j04_B 429 RLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAG 508 (524)
T ss_dssp STTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTS
T ss_pred hhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCc
Confidence 1 011122233311 12233455 45999999999
Q ss_pred cEEEEECCCC
Q 017601 348 SIFVADVVAK 357 (369)
Q Consensus 348 ~I~iWd~~~~ 357 (369)
+|+||++...
T Consensus 509 ~vrlw~l~~~ 518 (524)
T 2j04_B 509 LLTLEYLSLE 518 (524)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEcccc
Confidence 9999998643
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=228.80 Aligned_cols=258 Identities=14% Similarity=0.108 Sum_probs=200.6
Q ss_pred cccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCcee
Q 017601 84 SMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSM 163 (369)
Q Consensus 84 ~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 163 (369)
..+.+.+|.+.|++++|+|++ ..+++++.+|.|++||+.+.. ....+..|. ..+.+++|+| +...
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~h~-----~~v~~~~~~~-~~~~ 88 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEG----DLLFSCSKDSSASVWYSLNGE-----RLGTLDGHT-----GTIWSIDVDC-FTKY 88 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTS----CEEEEEESSSCEEEEETTTCC-----EEEEECCCS-----SCEEEEEECT-TSSE
T ss_pred ccEEEEEeeceEEEEEEcCCC----CEEEEEeCCCEEEEEeCCCch-----hhhhhhhcC-----CcEEEEEEcC-CCCE
Confidence 445578999999999999984 689999999999999987541 112233332 3467899999 4557
Q ss_pred EEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC-----CeEEEEeCCcccCCc-----
Q 017601 164 AAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG-----CQLTIWDLRMKENGG----- 231 (369)
Q Consensus 164 ~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d-----~~v~iwD~~~~~~~~----- 231 (369)
++++ +.|++|++||... .+..+. +...+..+.+ ++++..+++++.+ +.|++||++......
T Consensus 89 l~s~-~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~---~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 89 CVTG-SADYSIKLWDVSNGQCVATWK---SPVPVKRVEF---SPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp EEEE-ETTTEEEEEETTTCCEEEEEE---CSSCEEEEEE---CTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred EEEE-eCCCeEEEEECCCCcEEEEee---cCCCeEEEEE---ccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 7877 8999999999863 333332 4444444443 3457788888888 999999998763211
Q ss_pred ---eeeeeeccCCC--cEEEEEECCCC-cEEEEeCCCcEEEEeCCC-ceeeeeccccccCceEEEEEcCCCCCEEEEEEC
Q 017601 232 ---CLHRICGSVGD--ILYAVCSSSTG-NIAVAGADRTVTIYDPRR-WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 232 ---~~~~~~~~~~~--~v~~v~~sp~g-~lasgs~D~~v~vwD~~~-~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
.+..+..+ .. .+.+++|+|++ .|++|+.|+.|++||+++ ++.+..+..| ...|.+++|+| ++++|++++.
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~ 238 (369)
T 3zwl_B 162 SEEPIHKIITH-EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSP-DLTYFITSSR 238 (369)
T ss_dssp CSSCSEEEECC-TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEEEEECT-TSSEEEEEET
T ss_pred ccceeeeccCC-cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeEEEECC-CCCEEEEecC
Confidence 22223322 23 89999999999 999999999999999999 7888999999 99999999999 9999999999
Q ss_pred CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCC--------------cEEEEECCCCcchhhhcccC
Q 017601 305 DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSG--------------SIFVADVVAKENEISALKGL 367 (369)
Q Consensus 305 D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg--------------~I~iWd~~~~~~~~~~l~g~ 367 (369)
|+.|++||+++++.+..+........+...+++.++++++.++ .+++||..+++. +..+.+|
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 314 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE-IGRVQGH 314 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE-EEEEECC
T ss_pred CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc-hhheecc
Confidence 9999999999999999988665445556677999999999998 899999988763 3344444
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=4.4e-30 Score=239.80 Aligned_cols=257 Identities=16% Similarity=0.111 Sum_probs=190.3
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|.+++|+|++ ..+++++.+|.|++|++..... ........+ ...+.+++|+|+ ..+++++
T Consensus 48 ~~~h~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~-----~~~v~~~~~~~~-~~~l~~~ 114 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDS----NRIVTCGTDRNAYVWTLKGRTW---KPTLVILRI-----NRAARCVRWAPN-EKKFAVG 114 (372)
T ss_dssp EECCSSCEEEEEEETTT----TEEEEEETTSCEEEEEEETTEE---EEEEECCCC-----SSCEEEEEECTT-SSEEEEE
T ss_pred ecCCCCcccEEEEeCCC----CEEEEEcCCCeEEEEECCCCee---eeeEEeecC-----CCceeEEEECCC-CCEEEEE
Confidence 45799999999999974 6889999999999999975410 001111222 234678999995 5677887
Q ss_pred ecccceEEEEeCCcc--eEEEEee--eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcc---------------c
Q 017601 168 RSFSKSIDVYDQDIH--LRTLRTL--WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMK---------------E 228 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~--~~~~~~~--~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~---------------~ 228 (369)
+.|+.|++||.... ....... .+...+..+.+ .+++..|++++.|+.|++||++.. .
T Consensus 115 -~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (372)
T 1k8k_C 115 -SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW---HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 190 (372)
T ss_dssp -ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE---CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred -eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE---cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccc
Confidence 89999999987532 1112221 23444555553 345678888999999999996521 1
Q ss_pred CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
..+++..+..+ ...|++++|+|++ +|++++.|+.|++||+++++++..+..| ...|++++|+| ++.+|+++ .|+.
T Consensus 191 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~-~d~~ 266 (372)
T 1k8k_C 191 FGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE-TLPLLAVTFIT-ESSLVAAG-HDCF 266 (372)
T ss_dssp TTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS-SCCEEEEEEEE-TTEEEEEE-TTSS
T ss_pred hhhheEecCCC-CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC-CCCeEEEEEec-CCCEEEEE-eCCe
Confidence 12667777655 5889999999999 9999999999999999999999999999 89999999999 99888777 9999
Q ss_pred EEEEECcC--Cce--------------------------------e------EEE-EcCCCee-eeeEc-CCC---CEEE
Q 017601 308 VFCGQWRE--SSK--------------------------------V------FAF-RGDSNWL-GFSKC-SNR---DVLG 341 (369)
Q Consensus 308 i~vwd~~~--~~~--------------------------------~------~~~-~g~~~~~-~~~~~-~d~---~~l~ 341 (369)
|++||++. +.. . ..+ .+|.... .+... ++| .+|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 321 0 222 3776322 23223 476 9999
Q ss_pred EEeCCCcEEEEECCCCcchhhhcc
Q 017601 342 GWSDSGSIFVADVVAKENEISALK 365 (369)
Q Consensus 342 sgs~dg~I~iWd~~~~~~~~~~l~ 365 (369)
+|+.||.|++||+.+++..+..++
T Consensus 347 s~~~Dg~i~~W~~~~~~~~~~~~~ 370 (372)
T 1k8k_C 347 TTGMDGGMSIWDVRSLESALKDLK 370 (372)
T ss_dssp EEETTSEEEEEEHHHHHHHCTTCC
T ss_pred EecCCCceEEEEecChhHhhhhcc
Confidence 999999999999998876555543
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-28 Score=226.78 Aligned_cols=280 Identities=10% Similarity=-0.005 Sum_probs=204.7
Q ss_pred eEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCC
Q 017601 52 HLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGK 130 (369)
Q Consensus 52 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~ 130 (369)
.|..+++...+..+ ..+.++.+..++..... ....+.+|.+.|.+++|+|++ ..+++++.+|.|++||+.+...
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-RLGTLDGHTGTIWSIDVDCFT----KYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCE
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-hhhhhhhcCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcE
Confidence 34445555555444 33334433333332222 222356899999999999974 6889999999999999975521
Q ss_pred CCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc-----ceEEEEeCCcc--e-----------EEEEeeeCC
Q 017601 131 DVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS-----KSIDVYDQDIH--L-----------RTLRTLWYP 192 (369)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d-----~~i~lwd~~~~--~-----------~~~~~~~~~ 192 (369)
...+. + ...+.+++|+|++ ..++++ +.+ +.|.+||.... . ..+......
T Consensus 109 -----~~~~~-~-----~~~v~~~~~~~~~-~~l~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 109 -----VATWK-S-----PVPVKRVEFSPCG-NYFLAI-LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp -----EEEEE-C-----SSCEEEEEECTTS-SEEEEE-ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred -----EEEee-c-----CCCeEEEEEccCC-CEEEEe-cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 11111 1 2236689999954 466666 666 99999986421 1 111111111
Q ss_pred cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCC
Q 017601 193 SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRR 271 (369)
Q Consensus 193 ~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~ 271 (369)
..+..+.+ ++++..+++++.|+.|++||+++.. ..+..+..+ ...|.+++|+|++ +|++++.|+.|++||+++
T Consensus 176 ~~~~~~~~---~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 176 DAATVAGW---STKGKYIIAGHKDGKISKYDVSNNY--EYVDSIDLH-EKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp CCEEEEEE---CGGGCEEEEEETTSEEEEEETTTTT--EEEEEEECC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cceeEEEE---cCCCCEEEEEcCCCEEEEEECCCCc--EeEEEEecC-CCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 13333332 3456788889999999999999831 667777765 6899999999999 999999999999999999
Q ss_pred ceeeeeccccccCceEEEEEcCCCCCEEEEEECCC--------------eEEEEECcCCceeEEEEcCCCe-eeeeEcCC
Q 017601 272 WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY--------------EVFCGQWRESSKVFAFRGDSNW-LGFSKCSN 336 (369)
Q Consensus 272 ~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~--------------~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d 336 (369)
++.+..+. + ...+..+.|+| +++++++++.++ .+++||..+++.+..+.+|... ..+..+++
T Consensus 250 ~~~~~~~~-~-~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 250 LQVLKKYE-T-DCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp CCEEEEEE-C-SSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred Cceeeeec-C-CCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC
Confidence 99888887 5 68999999999 999999999998 8999999999999999998732 23444779
Q ss_pred CCEEEEEeCCCcEEEEECCCCc
Q 017601 337 RDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 337 ~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+.+|++++.||.|++|+++++.
T Consensus 327 ~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 327 GTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SSEEEEEETTSEEEEEEECHHH
T ss_pred CCEEEEEcCCCeEEEEECcccc
Confidence 9999999999999999998753
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.5e-30 Score=241.67 Aligned_cols=244 Identities=9% Similarity=0.040 Sum_probs=181.0
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.|.+.|++++|+|++ .++++++.+|.|++|++..... .....+..| ...+.+++|+|+ ..+++++ +
T Consensus 9 ~~~~~v~~~~~s~~g----~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~h-----~~~v~~~~~s~~-~~~l~s~-s 74 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQR----TEFVTTTATNQVELYEQDGNGW---KHARTFSDH-----DKIVTCVDWAPK-SNRIVTC-S 74 (377)
T ss_dssp ECSSCCSCCEECSSS----SEEECCCSSSCBCEEEEETTEE---EECCCBCCC-----SSCEEEEEECTT-TCCEEEE-E
T ss_pred cCCCcEEEEEECCCC----CEEEEecCCCEEEEEEccCCce---EEEEEEecC-----CceEEEEEEeCC-CCEEEEE-e
Confidence 366899999999984 6899999999999999985410 011122222 234678999995 5678888 8
Q ss_pred ccceEEEEeCCcce---EEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec-cCCCcEE
Q 017601 170 FSKSIDVYDQDIHL---RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG-SVGDILY 245 (369)
Q Consensus 170 ~d~~i~lwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~-~~~~~v~ 245 (369)
.|++|++||..... .......+...+..+.+ ++++..|++++.|++|++||+++++.......+.. + ...|+
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h-~~~v~ 150 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW---SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPL-RSTIL 150 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEEC---CTTSSCCEEEESSSCEEECCC-----CCCCEEECSSC-CSCEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEE---CCCCCEEEEEecCCeEEEEEECCcccceeeeEeeccc-CCCeE
Confidence 99999999986432 22223335556666664 34677899999999999999998732224666765 4 68999
Q ss_pred EEEECCCC-cEEEEeCCCcEEEEeCC------------------CceeeeeccccccCceEEEEEcCCCCCEEEEEECCC
Q 017601 246 AVCSSSTG-NIAVAGADRTVTIYDPR------------------RWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY 306 (369)
Q Consensus 246 ~v~~sp~g-~lasgs~D~~v~vwD~~------------------~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~ 306 (369)
+++|+|++ +|++|+.|++|++||++ .++++..+ +| ...|++++|+| ++++|++++.|+
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~sp-~~~~l~~~~~d~ 227 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS-GGWVHAVGFSP-SGNALAYAGHDS 227 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC-SSSEEEEEECT-TSSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC-CceEEEEEECC-CCCEEEEEeCCC
Confidence 99999999 99999999999999985 35667777 88 99999999999 999999999999
Q ss_pred eEEEEECcCCce----eEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 307 EVFCGQWRESSK----VFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 307 ~i~vwd~~~~~~----~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
+|++||+++++. +..+.+|... ..+...+++.+|++|+.|+.+ +|+..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999877 7888888732 344446799999999877777 56554
No 61
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-29 Score=234.66 Aligned_cols=250 Identities=12% Similarity=0.075 Sum_probs=186.3
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC-ceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ-WSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~a~ 166 (369)
+.+|.+.|.+++|+|++ ..+++++.+|.|++|++..... .....+..|. ..+.+++|+|.. ..++++
T Consensus 7 ~~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETH---KLIDTLTGHE-----GPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp EEECCCCEEEEEECSSS----SEEEEEETTSCEEEEEEETTEE---EEEEEECCCS-----SCEEEEEECCGGGCSEEEE
T ss_pred ecCCcccEEEEEEcCCC----CEEEEEECCCcEEEEecCCCcc---eeeeEecCCC-----CcEEEEEeCCCCCCCEEEE
Confidence 56899999999999984 6899999999999999974311 1112233332 346789998742 567787
Q ss_pred EecccceEEEEeCCcce--EEEEeeeCCcceeeeccCCCCCC--CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 167 ARSFSKSIDVYDQDIHL--RTLRTLWYPSSLNFVQNLSPVNG--GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~--~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
+ +.|+.|++||..... .......+...+..+.+. ++ +..+++++.|++|++||+++.... ....+..+ ..
T Consensus 75 ~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~-~~ 148 (379)
T 3jrp_A 75 C-SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA---PHEYGPLLLVASSDGKVSVVEFKENGTT-SPIIIDAH-AI 148 (379)
T ss_dssp E-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC---CGGGCSEEEEEETTSEEEEEECCTTSCC-CEEEEECC-TT
T ss_pred e-ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC---CCCCCCEEEEecCCCcEEEEecCCCCce-eeEEecCC-CC
Confidence 7 899999999975432 222222244555555543 34 568889999999999999977322 22334444 58
Q ss_pred cEEEEEECC-------------CC-cEEEEeCCCcEEEEeCCCce----eeeeccccccCceEEEEEcCCC---CCEEEE
Q 017601 243 ILYAVCSSS-------------TG-NIAVAGADRTVTIYDPRRWS----ALSRWVHCSKYEITGLSFSSID---SNYIYV 301 (369)
Q Consensus 243 ~v~~v~~sp-------------~g-~lasgs~D~~v~vwD~~~~~----~~~~~~~h~~~~v~~l~~sp~d---~~~l~s 301 (369)
.|++++|+| ++ .|++|+.|+.|++||++++. ....+.+| ...|++++|+| + +++|++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp-~~~~~~~l~s 226 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSP-TVLLRSYLAS 226 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECC-CCSSSEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc-cCcEeEEEECC-CCCCCCeEEE
Confidence 999999999 57 99999999999999998753 55678899 99999999999 8 899999
Q ss_pred EECCCeEEEEECcCCc---eeEEEE--cCC-CeeeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 302 QGVDYEVFCGQWRESS---KVFAFR--GDS-NWLGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 302 ~s~D~~i~vwd~~~~~---~~~~~~--g~~-~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
++.|+.|++||++++. ....+. .|. ....+...+++.+|++++.||.|++|++..+
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9999999999998863 222222 243 1234445779999999999999999999754
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=2.8e-29 Score=238.74 Aligned_cols=249 Identities=11% Similarity=0.083 Sum_probs=187.5
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
..+++++|+|++ ..+++++.+|.+++|++.+... ...+..+ ......+|+| ++.+++++ +.|+
T Consensus 57 ~~~~~~~~s~~g----~~l~~~~~d~~v~i~d~~~~~~-----~~~~~~~------~~~~~~~~~~-~~~~l~~~-~~dg 119 (420)
T 3vl1_A 57 DAGKGNTFEKVG----SHLYKARLDGHDFLFNTIIRDG-----SKMLKRA------DYTAVDTAKL-QMRRFILG-TTEG 119 (420)
T ss_dssp BCCTTCEEEEEE----TTEEEEEETTEEEEEECCSEET-----TTTSCSC------CEEEEEEECS-SSCEEEEE-ETTS
T ss_pred ccccceeeeecC----CeEEEEEcCCcEEEEEecccce-----eeEEecC------CceEEEEEec-CCCEEEEE-ECCC
Confidence 445689999984 6788888899999999875421 1111111 1133456788 55678888 8999
Q ss_pred eEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCC
Q 017601 173 SIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSST 252 (369)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 252 (369)
.|++||............|...+..+.+ +|++..|++++.|++|++||++++ +.+..+..+ ...|++++|+|+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~h-~~~v~~~~~~~~ 192 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKF---FPSGEALISSSQDMQLKIWSVKDG---SNPRTLIGH-RATVTDIAIIDR 192 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEE---CTTSSEEEEEETTSEEEEEETTTC---CCCEEEECC-SSCEEEEEEETT
T ss_pred CEEEEeCCCcceeeecccccCccEEEEE---CCCCCEEEEEeCCCeEEEEeCCCC---cCceEEcCC-CCcEEEEEEcCC
Confidence 9999998643322222235556666654 345678999999999999999988 677778766 689999999999
Q ss_pred C-cEEEEeCCCcEEEEeCCCceeeeeccccc--cCc---------------------eEEEEEcCCCCCEEEEEECCCeE
Q 017601 253 G-NIAVAGADRTVTIYDPRRWSALSRWVHCS--KYE---------------------ITGLSFSSIDSNYIYVQGVDYEV 308 (369)
Q Consensus 253 g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~--~~~---------------------v~~l~~sp~d~~~l~s~s~D~~i 308 (369)
+ +|++|+.|++|++||+++++.+..+..|. ... +.+++|+| ++++|++++.|+.|
T Consensus 193 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i 271 (420)
T 3vl1_A 193 GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVI 271 (420)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCE
T ss_pred CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeE
Confidence 9 99999999999999999999988887530 334 44455678 99999999999999
Q ss_pred EEEECcCCceeEEEEc-CCC-eeeeeEcCCCC-EEEEEeCCCcEEEEECCCCcchhhhccc
Q 017601 309 FCGQWRESSKVFAFRG-DSN-WLGFSKCSNRD-VLGGWSDSGSIFVADVVAKENEISALKG 366 (369)
Q Consensus 309 ~vwd~~~~~~~~~~~g-~~~-~~~~~~~~d~~-~l~sgs~dg~I~iWd~~~~~~~~~~l~g 366 (369)
++||+++++....+.. |.. ...+...+++. +|++|+.||.|++||+++++..+..+.+
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 272 TVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp EEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred EEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 9999999887777753 542 23445567877 9999999999999999988655555544
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-28 Score=221.15 Aligned_cols=244 Identities=12% Similarity=0.088 Sum_probs=188.3
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
...|.+.|.+++|+|++ ..+++++.+|.+.+|++........ ...+..| ...+.+++|+ +..++++
T Consensus 55 ~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~~~~--~~~~~~~-----~~~i~~~~~~---~~~l~~~ 120 (313)
T 3odt_A 55 VYTGQGFLNSVCYDSEK----ELLLFGGKDTMINGVPLFATSGEDP--LYTLIGH-----QGNVCSLSFQ---DGVVISG 120 (313)
T ss_dssp EEECSSCEEEEEEETTT----TEEEEEETTSCEEEEETTCCTTSCC---CEECCC-----SSCEEEEEEE---TTEEEEE
T ss_pred eecCCccEEEEEECCCC----CEEEEecCCCeEEEEEeeecCCCCc--ccchhhc-----ccCEEEEEec---CCEEEEE
Confidence 45789999999999984 6899999999999999875421111 1222222 2346688883 3477777
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|+.|++||.......+.. +...+..+.+.+ +++..+++++.|+.|++||.. +.+..+.......+.++
T Consensus 121 -~~d~~i~~~d~~~~~~~~~~--~~~~v~~~~~~~--~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~ 190 (313)
T 3odt_A 121 -SWDKTAKVWKEGSLVYNLQA--HNASVWDAKVVS--FSENKFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHL 190 (313)
T ss_dssp -ETTSEEEEEETTEEEEEEEC--CSSCEEEEEEEE--TTTTEEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEE
T ss_pred -eCCCCEEEEcCCcEEEeccc--CCCceeEEEEcc--CCCCEEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEE
Confidence 89999999996555554433 333333333222 246789999999999999943 45555554225899999
Q ss_pred EECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCC
Q 017601 248 CSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSN 327 (369)
Q Consensus 248 ~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~ 327 (369)
+|+|++.+++++.|+.|++||+++++++..+.+| ...|++++|+| ++ .|++++.|+.|++||++++++...+.+|..
T Consensus 191 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 267 (313)
T 3odt_A 191 AVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGH-ESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI 267 (313)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSS
T ss_pred EEcCCCeEEEccCCCeEEEEECCchhhhhhhhcC-CceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCc
Confidence 9999999999999999999999999999999999 99999999999 88 588999999999999999999999998872
Q ss_pred -eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 328 -WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 328 -~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
...+...+++. +++++.||.|++||+++++.
T Consensus 268 ~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 268 SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp CEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 23444466877 66799999999999988753
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.2e-29 Score=236.66 Aligned_cols=238 Identities=9% Similarity=0.025 Sum_probs=189.0
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
+|.+.|.+++|+|++ .++++++.+|.|++|+.... ....+..|. ..+.+++|+|+ ...++++ +
T Consensus 106 ~~~~~v~~~~~s~~~----~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~-----~~v~~~~~~~~-~~~l~~~-~ 168 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDG----NSIVTGVENGELRLWNKTGA------LLNVLNFHR-----APIVSVKWNKD-GTHIISM-D 168 (425)
T ss_dssp --CBCEEEEEECTTS----SEEEEEETTSCEEEEETTSC------EEEEECCCC-----SCEEEEEECTT-SSEEEEE-E
T ss_pred CCCCceEEEEEcCCC----CEEEEEeCCCeEEEEeCCCC------eeeeccCCC-----ccEEEEEECCC-CCEEEEE-e
Confidence 478899999999984 68999999999999993311 112222222 34678999995 4567777 8
Q ss_pred ccceEEEEeCCc--ceEEEEeeeC----------------CcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc
Q 017601 170 FSKSIDVYDQDI--HLRTLRTLWY----------------PSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG 231 (369)
Q Consensus 170 ~d~~i~lwd~~~--~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~ 231 (369)
.|+.|++||... ....+..... ...+.+. + ++.+++++.|+.|++||++++ +
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~g~i~~~d~~~~---~ 238 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWV------D-DDKFVIPGPKGAIFVYQITEK---T 238 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEE------E-TTEEEEECGGGCEEEEETTCS---S
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEc------C-CCEEEEEcCCCeEEEEEcCCC---c
Confidence 899999999853 3333322111 2233333 2 467899999999999999987 6
Q ss_pred eeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEE
Q 017601 232 CLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFC 310 (369)
Q Consensus 232 ~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~v 310 (369)
.+..+..+ ...|++++|+|++ +|++++.|+.|++||+++++.+..+.+| ...|.+++|+| ++ ++++++.|+.|++
T Consensus 239 ~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~-~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 239 PTGKLIGH-HGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVG-DD-KVISCSMDGSVRL 314 (425)
T ss_dssp CSEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC-SSCEEEEEEET-TT-EEEEEETTSEEEE
T ss_pred eeeeeccC-CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC-CccEEEEEECC-CC-EEEEEeCCCcEEE
Confidence 77777655 6899999999999 9999999999999999999999999999 99999999999 88 9999999999999
Q ss_pred EECcCCceeEEEEcCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 311 GQWRESSKVFAFRGDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 311 wd~~~~~~~~~~~g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
||+++++.+..+.+|.. ...+...+++.+|++++.||.|++||+.+++
T Consensus 315 ~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 315 WSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 99999999999988762 2344446799999999999999999998765
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=5.8e-29 Score=232.18 Aligned_cols=246 Identities=9% Similarity=0.014 Sum_probs=191.3
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.|.+.|.+++|+|++ .++++++.+|.|++|++..... .....+..|. ..+.+++|+| +..+++++ +
T Consensus 6 ~~~~~i~~~~~s~~~----~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~~h~-----~~v~~~~~~~-~~~~l~~~-~ 71 (372)
T 1k8k_C 6 FLVEPISCHAWNKDR----TQIAICPNNHEVHIYEKSGNKW---VQVHELKEHN-----GQVTGVDWAP-DSNRIVTC-G 71 (372)
T ss_dssp SCSSCCCEEEECTTS----SEEEEECSSSEEEEEEEETTEE---EEEEEEECCS-----SCEEEEEEET-TTTEEEEE-E
T ss_pred ccCCCeEEEEECCCC----CEEEEEeCCCEEEEEeCCCCcE---EeeeeecCCC-----CcccEEEEeC-CCCEEEEE-c
Confidence 488999999999984 6899999999999999985410 0112222332 3467899999 45577877 8
Q ss_pred ccceEEEEeCCcc--eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee-ccCCCcEEE
Q 017601 170 FSKSIDVYDQDIH--LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-GSVGDILYA 246 (369)
Q Consensus 170 ~d~~i~lwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-~~~~~~v~~ 246 (369)
.|+.|++||.... ...+....+...+..+.+ ++++..|++++.|+.|++||++.+........+. .+ ...|++
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~i~~ 147 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRW---APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI-RSTVLS 147 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE---CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC-CSCEEE
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEE---CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc-CCCeeE
Confidence 9999999997532 223333334455555553 3457788889999999999998873211233333 33 588999
Q ss_pred EEECCCC-cEEEEeCCCcEEEEeCC------------------CceeeeeccccccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 247 VCSSSTG-NIAVAGADRTVTIYDPR------------------RWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 247 v~~sp~g-~lasgs~D~~v~vwD~~------------------~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
++|+|++ +|++|+.|+.|++||++ .++.+..+.+| ...|++++|+| ++++|++++.|+.
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSA-NGSRVAWVSHDST 225 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECS-SSSEEEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECC-CCCEEEEEeCCCE
Confidence 9999999 99999999999999954 67888899999 99999999999 9999999999999
Q ss_pred EEEEECcCCceeEEEEcCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 308 VFCGQWRESSKVFAFRGDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 308 i~vwd~~~~~~~~~~~g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
|++||+++++++..+.+|.. ...+...+++.+|++| .|+.|++|++.+
T Consensus 226 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 226 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999999998872 2334446688888888 999999999987
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=2.4e-29 Score=239.24 Aligned_cols=239 Identities=11% Similarity=0.028 Sum_probs=178.7
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
..+....|++++ ..+++++.+|.|++||+.... ....+..|. ..+.+++|+|+ ..+++++ +.|+
T Consensus 98 ~~~~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~h~-----~~v~~~~~~~~-~~~l~s~-s~d~ 161 (420)
T 3vl1_A 98 DYTAVDTAKLQM----RRFILGTTEGDIKVLDSNFNL-----QREIDQAHV-----SEITKLKFFPS-GEALISS-SQDM 161 (420)
T ss_dssp CEEEEEEECSSS----CEEEEEETTSCEEEECTTSCE-----EEEETTSSS-----SCEEEEEECTT-SSEEEEE-ETTS
T ss_pred CceEEEEEecCC----CEEEEEECCCCEEEEeCCCcc-----eeeeccccc-----CccEEEEECCC-CCEEEEE-eCCC
Confidence 444455677773 689999999999999987441 111222332 34679999995 5577887 8999
Q ss_pred eEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC--CCcEE---
Q 017601 173 SIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV--GDILY--- 245 (369)
Q Consensus 173 ~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~--~~~v~--- 245 (369)
+|++||... .++.+. .|...+..+.+ +|++..|++++.|++|++||++++ +++..+..+. ...|.
T Consensus 162 ~i~iwd~~~~~~~~~~~--~h~~~v~~~~~---~~~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLI--GHRATVTDIAI---IDRGRNVLSASLDGTIRLWECGTG---TTIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp EEEEEETTTCCCCEEEE--CCSSCEEEEEE---ETTTTEEEEEETTSCEEEEETTTT---EEEEEECBTTBTTCCEEEEE
T ss_pred eEEEEeCCCCcCceEEc--CCCCcEEEEEE---cCCCCEEEEEcCCCcEEEeECCCC---ceeEEeecCCCCCCCccEEE
Confidence 999999863 344432 34444544443 245778999999999999999988 6777665321 23444
Q ss_pred ------------------EEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCC-EEEEEEC
Q 017601 246 ------------------AVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSN-YIYVQGV 304 (369)
Q Consensus 246 ------------------~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~-~l~s~s~ 304 (369)
+++|+|++ +|++|+.|+.|++||+++++.+..+. +| ...|++++|+| ++. +|++++.
T Consensus 234 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~~l~~g~~ 311 (420)
T 3vl1_A 234 LFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF-TCSCNSLTVDG-NNANYIYAGYE 311 (420)
T ss_dssp EEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT-SSCEEEEEECS-SCTTEEEEEET
T ss_pred EecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc-CCCceeEEEeC-CCCCEEEEEeC
Confidence 45568999 99999999999999999988877665 46 89999999999 888 9999999
Q ss_pred CCeEEEEECcCCc-eeEEEEc-CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 305 DYEVFCGQWRESS-KVFAFRG-DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 305 D~~i~vwd~~~~~-~~~~~~g-~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
|+.|++||+++++ .+..+.+ |.........+++.+|++++.||.|++|++...
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred CCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 9999999999864 4777776 442222233458889999999999999998874
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.8e-29 Score=235.23 Aligned_cols=279 Identities=11% Similarity=0.020 Sum_probs=205.2
Q ss_pred eEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCC
Q 017601 52 HLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGK 130 (369)
Q Consensus 52 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~ 130 (369)
.|..+++...+..+ ..+.++.+..++ .... ....+..|.+.|.+++|+|++ ..+++++.+|.+++|++..+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~-~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGA-LLNVLNFHRAPIVSVKWNKDG----THIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSC-EEEEECCCCSCEEEEEECTTS----SEEEEEETTCCEEEEETTTTEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCC-eeeeccCCCccEEEEEECCCC----CEEEEEecCCeEEEEECCCCcE
Confidence 56666666555544 223343332222 1111 222356799999999999984 6888999999999999975421
Q ss_pred CCccccccccCCCCC----------CCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcc--eEEEEeeeCCcceeee
Q 017601 131 DVDRLTYSVLPQDCG----------VGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH--LRTLRTLWYPSSLNFV 198 (369)
Q Consensus 131 ~~~~~~~~~~~~~~~----------~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~--~~~~~~~~~~~~v~~~ 198 (369)
...+..+... .....+.+++|+|+ ..++++ +.++.|++||.... ...+. .+...+..+
T Consensus 184 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~g~i~~~d~~~~~~~~~~~--~~~~~i~~~ 253 (425)
T 1r5m_A 184 -----MQHFELKETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIP-GPKGAIFVYQITEKTPTGKLI--GHHGPISVL 253 (425)
T ss_dssp -----EEEECCC---------------CCCBSCCEEEET--TEEEEE-CGGGCEEEEETTCSSCSEEEC--CCSSCEEEE
T ss_pred -----EEEeeccccCccceeeccccCCcceeeEEEEcCC--CEEEEE-cCCCeEEEEEcCCCceeeeec--cCCCceEEE
Confidence 1111111110 00001457899884 356777 88999999998642 22222 234444444
Q ss_pred ccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeec
Q 017601 199 QNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRW 278 (369)
Q Consensus 199 ~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~ 278 (369)
.+ ++++..|++++.|+.|++||++++ +.+..+..+ ...|.+++|+|++.+++++.|+.|++||+++++.+..+
T Consensus 254 ~~---~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~-~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 254 EF---NDTNKLLLSASDDGTLRIWHGGNG---NSQNCFYGH-SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EE---ETTTTEEEEEETTSCEEEECSSSB---SCSEEECCC-SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EE---CCCCCEEEEEcCCCEEEEEECCCC---ccceEecCC-CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEec
Confidence 43 245678888999999999999987 677777655 58999999999999999999999999999999999999
Q ss_pred cccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCc--------------------eeEEEEcCC---CeeeeeEcC
Q 017601 279 VHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESS--------------------KVFAFRGDS---NWLGFSKCS 335 (369)
Q Consensus 279 ~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~--------------------~~~~~~g~~---~~~~~~~~~ 335 (369)
..| ...|++++|+| ++++|++++.|+.|++||+++++ ++..+.+|. ....+..++
T Consensus 327 ~~~-~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 327 IVD-GVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp ECT-TCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred ccC-CccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 999 99999999999 99999999999999999999877 889998884 334455577
Q ss_pred CCCEEEEEeCCCcEEEEECC
Q 017601 336 NRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 336 d~~~l~sgs~dg~I~iWd~~ 355 (369)
++.+|++++.||.|++||++
T Consensus 405 ~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 405 AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEecCceEEEEeec
Confidence 99999999999999999985
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.8e-28 Score=232.81 Aligned_cols=244 Identities=13% Similarity=0.075 Sum_probs=186.9
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
...|.+.|.+++|+|++ ..+++++.+|.|.+||+.+.. ....+..|. ..+.+++|++ ..++++
T Consensus 130 ~~~~~~~v~~v~~s~~~----~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~-----~~v~~~~~~~---~~l~~~ 192 (401)
T 4aez_A 130 ETDESTYVASVKWSHDG----SFLSVGLGNGLVDIYDVESQT-----KLRTMAGHQ-----ARVGCLSWNR---HVLSSG 192 (401)
T ss_dssp ECCTTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTCC-----EEEEECCCS-----SCEEEEEEET---TEEEEE
T ss_pred ecCCCCCEEEEEECCCC----CEEEEECCCCeEEEEECcCCe-----EEEEecCCC-----CceEEEEECC---CEEEEE
Confidence 44589999999999974 689999999999999987552 112222332 3466889954 477777
Q ss_pred ecccceEEEEeCCcceEEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|+.|++||......... ...+...+..+.+. +++..|++++.|++|++||++++ .++..+..+ ...|.+
T Consensus 193 -~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~~-~~~v~~ 264 (401)
T 4aez_A 193 -SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR---SDGLQLASGGNDNVVQIWDARSS---IPKFTKTNH-NAAVKA 264 (401)
T ss_dssp -ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC---TTSSEEEEEETTSCEEEEETTCS---SEEEEECCC-SSCCCE
T ss_pred -cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc---CCCCEEEEEeCCCeEEEccCCCC---CccEEecCC-cceEEE
Confidence 8999999999863222222 22345555555543 45678999999999999999987 777777655 689999
Q ss_pred EEECCCC--cEEEEe--CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE--CCCeEEEEECcCCceeE
Q 017601 247 VCSSSTG--NIAVAG--ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG--VDYEVFCGQWRESSKVF 320 (369)
Q Consensus 247 v~~sp~g--~lasgs--~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s--~D~~i~vwd~~~~~~~~ 320 (369)
++|+|++ ++++|+ .|+.|++||+++++++..+. | ...|++++|+| ++.++++++ .|+.|++||+.+++...
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~-~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-A-GSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-C-SSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-C-CCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCcccee
Confidence 9999988 666765 79999999999999988886 4 57899999999 999999954 89999999999865544
Q ss_pred E--EEcCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 321 A--FRGDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 321 ~--~~g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
. +.+|.. ...+...+++.+|++++.||.|++||+.+++.
T Consensus 342 ~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 342 QVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred EEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 4 567762 23344577999999999999999999998864
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=249.20 Aligned_cols=252 Identities=12% Similarity=0.034 Sum_probs=181.0
Q ss_pred CccceeeEEEEeecCCCC-----ceEEEE-------------------EecCCcEEEEEecCCCCCCccccccccCCCCC
Q 017601 90 PHRSEVQSIALAETDSSG-----YMVLGS-------------------VDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCG 145 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~-----~~~las-------------------~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (369)
.+.+.|++++|+|++.+. ..++|+ ++.++.|++|++..+..... ....+..+
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-~~~~l~~~--- 206 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-KVQTIVHS--- 206 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE-EEEEEEEC---
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-EEEEEEec---
Confidence 357888999999874111 134443 55778999999976421100 00111111
Q ss_pred CCCCCeeEEEECCC-----CceeEEEEecccceEEEEeCCcceE----------EEEee-eCCcceeeeccCCCCCCCCc
Q 017601 146 VGEGSWSGLCFSPS-----QWSMAAVARSFSKSIDVYDQDIHLR----------TLRTL-WYPSSLNFVQNLSPVNGGPN 209 (369)
Q Consensus 146 ~~~~~~~~l~~~p~-----~~~~~a~~~s~d~~i~lwd~~~~~~----------~~~~~-~~~~~v~~~~~~~~~~~~~~ 209 (369)
.+.+.+++|+|. +..+||++ +.|++|+|||+..... ..... .+...+..+.+. + ++.
T Consensus 207 --~~~V~~v~wsp~~~~~~~~~~LAs~-s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s---~-~~~ 279 (524)
T 2j04_B 207 --FGEVWDLKWHEGCHAPHLVGCLSFV-SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFL---S-PTT 279 (524)
T ss_dssp --CCSEEEEEECSSCCCSSSSCEEEEE-ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEES---S-SSE
T ss_pred --CCcEEEEEECCCCCCCCCCceEEEE-ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEec---C-CCe
Confidence 234668999995 24578888 8999999999853210 01111 233445555543 2 358
Q ss_pred EEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE--EECCCC--cEEEEeCCCcEEEEeCCCceeeeeccccccC-
Q 017601 210 MLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV--CSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSKY- 284 (369)
Q Consensus 210 lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v--~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~- 284 (369)
|++++.||+|+|||++++. .+...+..| ...|++| +|+|++ +||+||.|++|+|||+++++++.++.+| ..
T Consensus 280 lasgs~DgtV~lWD~~~~~--~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~-~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE--VPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR-FRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCS--SCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE-CSC
T ss_pred EEEEeCCCEEEEEECCCCC--CceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc-ccc
Confidence 8899999999999999762 344556666 6899999 678886 7899999999999999999888888888 43
Q ss_pred -ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 285 -EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 285 -~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
.|.+++|+| ++..+++++.|++|++||++++.++..+.+|... ..+..++++.+|++|+.||+|++||+..+
T Consensus 356 ~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 356 SNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 589999999 9999999999999999999999988889899843 34444779999999999999999998653
No 70
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.3e-28 Score=232.56 Aligned_cols=247 Identities=12% Similarity=0.105 Sum_probs=188.1
Q ss_pred cccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 86 LNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 86 ~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
+...+|.+.|++|+|+|++ ..+++++.+|.|.+||+.++. ....+..|.. .+.++++++ .+++
T Consensus 141 ~~~~~~~~~V~sv~fspdg----~~lasgs~Dg~v~iWd~~~~~-----~~~~~~~h~~-----~v~~~s~~~---~~l~ 203 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQK-----RLRNMTSHSA-----RVGSLSWNS---YILS 203 (420)
T ss_dssp EECCSTTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTTE-----EEEEECCCSS-----CEEEEEEET---TEEE
T ss_pred EEecCCCCcEEEEEECCCC----CEEEEEECCCeEEEEEcCCCc-----EEEEEeCCCC-----ceEEEeeCC---CEEE
Confidence 3456889999999999984 789999999999999998651 1222333322 244666654 4777
Q ss_pred EEecccceEEEEeCCcceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCC-ceeeeeeccCCCc
Q 017601 166 VARSFSKSIDVYDQDIHLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENG-GCLHRICGSVGDI 243 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~-~~~~~~~~~~~~~ 243 (369)
++ +.|+.+++||.......+... .+...+..+.+ .+++..+++++.|+.++|||.++++.. ..+.....+ ...
T Consensus 204 sg-s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~---~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~ 278 (420)
T 4gga_A 204 SG-SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW---APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGA 278 (420)
T ss_dssp EE-ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC-SSC
T ss_pred EE-eCCCceeEeeecccceeeEEecccccceeeeee---cCCCCeeeeeeccccceEEeeccccccceeeeeeccc-CCc
Confidence 77 899999999976433333222 24444444443 245778899999999999999876422 233444444 589
Q ss_pred EEEEEECCCC--cEEE--EeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE--CCCeEEEEECcCCc
Q 017601 244 LYAVCSSSTG--NIAV--AGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG--VDYEVFCGQWRESS 317 (369)
Q Consensus 244 v~~v~~sp~g--~las--gs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s--~D~~i~vwd~~~~~ 317 (369)
|.+++|+|++ .+++ |+.|++|++||++++++...+..| ..+.++.|+| +++.+++++ .|+.|++||+.+++
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCC
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc--cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCc
Confidence 9999999988 5555 457999999999999999988876 6799999999 888888765 79999999999999
Q ss_pred eeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 318 KVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 318 ~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
++..+.||... ..+..++||.+|+|||.|++|+|||+.+.
T Consensus 356 ~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 356 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999833 34444779999999999999999998764
No 71
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=2.6e-28 Score=224.88 Aligned_cols=200 Identities=16% Similarity=0.140 Sum_probs=163.9
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCc----ceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeC
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI----HLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDL 224 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~----~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~ 224 (369)
.+.+++|+|.++.+++++ +.|++|++||... ....++.+ .|...+..+.+ ++++..+++++.|++|+|||+
T Consensus 19 ~V~~l~~~~~~~~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~dg~~l~s~s~D~~v~~wd~ 94 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSA-SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL---TADGAYALSASWDKTLRLWDV 94 (319)
T ss_dssp CEEEEEECSSCTTEEEEE-ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEEccCCCccEEEEe-cCCccEEEecCCCCCccccccceEEeCCcccEEEEEE---CCCCCEEEEEeCCCEEEEEEC
Confidence 466899999777788888 9999999998742 11222222 24445554443 356788999999999999999
Q ss_pred CcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCC-----CCCE
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI-----DSNY 298 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~-----d~~~ 298 (369)
+++ +++..+.+| ...|++++|+|++ +|++|+.|++|++||++ ++.+.++.+| ...|.++.|+|. ++..
T Consensus 95 ~~~---~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 95 ATG---ETYQRFVGH-KSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGH-NDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp TTT---EEEEEEECC-SSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCC-SSCEEEEEECCC------CCE
T ss_pred CCC---CeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEecc-CCcEEEEEEccCCCCCCCccE
Confidence 988 788888877 6899999999999 99999999999999996 5677888999 999999999982 2348
Q ss_pred EEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 299 IYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 299 l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
|++++.|++|++||+++.+....+.+|... ..+...+++.+|++|+.||+|++||+.+++.
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 999999999999999999999999998732 2344477999999999999999999988753
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1e-28 Score=228.96 Aligned_cols=252 Identities=9% Similarity=0.114 Sum_probs=185.9
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEec---CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC--ce
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDS---YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ--WS 162 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~---~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~--~~ 162 (369)
..+|.+.|.+++|+|++ ..++++++. +|.|++|++.++.. . ......| ...+.+++|+|+. +.
T Consensus 14 ~~~h~~~v~~~~~~p~~---~~l~~~~s~~~~d~~v~iw~~~~~~~---~-~~~~~~~-----~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCS---AKFVTMGNFARGTGVIQLYEIQHGDL---K-LLREIEK-----AKPIKCGTFGATSLQQR 81 (357)
T ss_dssp EEECSSCEEEEEECTTS---SEEEEEEC--CCCEEEEEEEECSSSE---E-EEEEEEE-----SSCEEEEECTTCCTTTC
T ss_pred ccCCCCceEEEEEcCCC---ceEEEecCccCCCcEEEEEeCCCCcc---c-ceeeecc-----cCcEEEEEEcCCCCCCc
Confidence 35799999999999984 357777765 89999999986521 0 0111112 2346789999964 57
Q ss_pred eEEEEecccceEEEEeCCc---ceEEEEeeeCCcceeee---ccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee
Q 017601 163 MAAVARSFSKSIDVYDQDI---HLRTLRTLWYPSSLNFV---QNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~---~~~~~~~~~~~~~v~~~---~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~ 236 (369)
+++++ +.|+.|++||... ....+. .+...+..+ ....+++++..|++++.|++|++||+++++ ..+..+
T Consensus 82 ~l~~~-~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~ 156 (357)
T 3i2n_A 82 YLATG-DFGGNLHIWNLEAPEMPVYSVK--GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD--DPVANM 156 (357)
T ss_dssp CEEEE-ETTSCEEEECTTSCSSCSEEEC--CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS--SCSEEE
T ss_pred eEEEe-cCCCeEEEEeCCCCCccEEEEE--ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC--Ccceec
Confidence 78888 8999999999863 333332 233334333 322356778899999999999999999873 255555
Q ss_pred eccC---CCcEEEEE----ECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCC--CCCEEEEEECCC
Q 017601 237 CGSV---GDILYAVC----SSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI--DSNYIYVQGVDY 306 (369)
Q Consensus 237 ~~~~---~~~v~~v~----~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~--d~~~l~s~s~D~ 306 (369)
..+. ...+++++ |+|++ .|++|+.|+.|++||+++++.... ..| ...|.+++|+|. ++.+|++++.|+
T Consensus 157 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 157 EPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNI-KNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp CCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EEC-SSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred cccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCC-CCceEEEEcCCCCCCCCEEEEECCCC
Confidence 4331 24899998 78899 999999999999999999887544 567 889999999996 689999999999
Q ss_pred eEEEEECcCCceeEEEE-----cCCCe-eeeeEcCCCC-EEEEEeCCCcEEEEECCCCc
Q 017601 307 EVFCGQWRESSKVFAFR-----GDSNW-LGFSKCSNRD-VLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 307 ~i~vwd~~~~~~~~~~~-----g~~~~-~~~~~~~d~~-~l~sgs~dg~I~iWd~~~~~ 358 (369)
.|++||+++++....+. +|... ..+...+++. +|++++.||.|++||++++.
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 99999998866555444 77632 2344467777 89999999999999998654
No 73
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.7e-29 Score=239.04 Aligned_cols=288 Identities=11% Similarity=0.050 Sum_probs=193.3
Q ss_pred CCeEEEEEEeCC-chhhh-cCCCccccccCccccc-ccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEec
Q 017601 50 GCHLYKLQVMMD-DWFVS-EGKDSLLIPEQTPVMD-SSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLD 126 (369)
Q Consensus 50 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~ 126 (369)
...|..+++.+. +.++. .+.++....++..... ...+...+|.+.|++|+|+|.+ ..+|++++.+|.|++||+.
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~---~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN---TNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC---TTEEEEECSSSCEEEEETT
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC---CCEEEEEeCCCEEEEeecc
Confidence 345777777763 34443 3455554444443322 2344567999999999999852 4689999999999999987
Q ss_pred CCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCC
Q 017601 127 TSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVN 205 (369)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 205 (369)
.... ......+.. ...+.+++|+|+ ..+++++ +.|++|++||... .+..+. .|...+..+.+. |
T Consensus 196 ~~~~-----~~~~~~~~~---~~~~~~~~~~~~-~~~l~~g-~~dg~i~~wd~~~~~~~~~~--~h~~~v~~v~~~---p 260 (435)
T 4e54_B 196 GNIL-----RVFASSDTI---NIWFCSLDVSAS-SRMVVTG-DNVGNVILLNMDGKELWNLR--MHKKKVTHVALN---P 260 (435)
T ss_dssp SCEE-----EEEECCSSC---SCCCCCEEEETT-TTEEEEE-CSSSBEEEEESSSCBCCCSB--CCSSCEEEEEEC---T
T ss_pred CCce-----eEEeccCCC---CccEEEEEECCC-CCEEEEE-eCCCcEeeeccCcceeEEEe--cccceEEeeeec---C
Confidence 4310 011111111 112457999994 5677887 8999999999853 333222 244455555543 3
Q ss_pred CCC-cEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccccc
Q 017601 206 GGP-NMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSK 283 (369)
Q Consensus 206 ~~~-~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~ 283 (369)
++. .+++++.|++|+|||+++......+.....| ...|++++|+|+| +|++|+.|++|+|||++++.....+..| .
T Consensus 261 ~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~-~ 338 (435)
T 4e54_B 261 CCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH-RHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH-P 338 (435)
T ss_dssp TCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC-SSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC-C
T ss_pred CCceEEEEecCcceeeEEecccccccceEEEeeec-cccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc-c
Confidence 344 4567889999999999987432333333334 5899999999999 9999999999999999998887777665 3
Q ss_pred C------ceEEEEEcCCCCCEEEEEE------------CCCeEEEEECcCCceeEEEE-cCCCe-eee-eEcCCCCEEEE
Q 017601 284 Y------EITGLSFSSIDSNYIYVQG------------VDYEVFCGQWRESSKVFAFR-GDSNW-LGF-SKCSNRDVLGG 342 (369)
Q Consensus 284 ~------~v~~l~~sp~d~~~l~s~s------------~D~~i~vwd~~~~~~~~~~~-g~~~~-~~~-~~~~d~~~l~s 342 (369)
. .+..+.|+| ++.++++++ .++.|++||..+++++..+. +|... ..+ ...++|.+|++
T Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp CCCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEE
T ss_pred ccccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEE
Confidence 2 234556777 666666654 34689999999999888875 45522 122 23679999999
Q ss_pred EeCCCcEEEEECCCCcc
Q 017601 343 WSDSGSIFVADVVAKEN 359 (369)
Q Consensus 343 gs~dg~I~iWd~~~~~~ 359 (369)
|+ |+.|+|||+++++.
T Consensus 418 g~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 418 AM-GYHILIWSQQEART 433 (435)
T ss_dssp EC-SSEEEECCCC----
T ss_pred Ec-CCcEEEEECCcCee
Confidence 86 78999999998864
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=5.9e-28 Score=233.06 Aligned_cols=246 Identities=12% Similarity=0.088 Sum_probs=187.0
Q ss_pred ccCCcccee-eEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 87 NRCPHRSEV-QSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 87 ~~~~H~~~V-~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
.+.+|.+.| .++.+++ ..+++++.+|.|++||+.++. ....+..|. ..+.+++|+|++ .++
T Consensus 116 ~l~~h~~~v~~~~~~~~------~~l~sgs~dg~i~vwd~~~~~-----~~~~~~~h~-----~~V~~l~~~~~~--~l~ 177 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFED------NYVITGADDKMIRVYDSINKK-----FLLQLSGHD-----GGVWALKYAHGG--ILV 177 (464)
T ss_dssp EEECCSSSCEEEEEEET------TEEEEEETTSCEEEEETTTTE-----EEEEECCCS-----SCEEEEEECSTT--EEE
T ss_pred EEcCCCCCcEEEEEECC------CEEEEEcCCCcEEEEECCCCc-----EEEEEeCCC-----cCEEEEEEcCCC--EEE
Confidence 456888885 6666643 489999999999999987541 122233332 346789999854 777
Q ss_pred EEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc--------------
Q 017601 166 VARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG-------------- 231 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~-------------- 231 (369)
++ +.|++|++||............+...+..+...+. +++..+++++.|++|++||++++....
T Consensus 178 s~-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 178 SG-STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEY-KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp EE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEES-SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred EE-eCCCCEEEEECCCCcEEEEECCCCCccEEEEEecC-CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 77 89999999998643322222224444444433221 345688889999999999998763211
Q ss_pred ------eeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEEC
Q 017601 232 ------CLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 232 ------~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
.+..+.++ ...+.++ ++++ .+++|+.|++|++||+++++++..+.+| ...|++++|+| ++++|++++.
T Consensus 256 ~~~~~~~~~~~~~~-~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~sg~~ 330 (464)
T 3v7d_B 256 PEENPYFVGVLRGH-MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-TDRIYSTIYDH-ERKRCISASM 330 (464)
T ss_dssp GGGCTTEEEEECCC-SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEET-TTTEEEEEET
T ss_pred cCCCeEEEEEccCc-cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CCCEEEEEEcC-CCCEEEEEeC
Confidence 13344444 4667766 5778 9999999999999999999999999999 99999999999 9999999999
Q ss_pred CCeEEEEECcCCceeEEEEcCCCeeeeeEc-CCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 305 DYEVFCGQWRESSKVFAFRGDSNWLGFSKC-SNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 305 D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~-~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
|++|++||+++++++..+.+|. ..+... .++.+|++|+.||.|++||+.+++.
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHT--ALVGLLRLSDKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCS--SCEEEEEECSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEECCCCcEEEEEeCCC--CcEEEEEEcCCEEEEEeCCCcEEEEECCCCce
Confidence 9999999999999999999998 333332 2689999999999999999988764
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.8e-29 Score=234.63 Aligned_cols=206 Identities=17% Similarity=0.082 Sum_probs=149.3
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|.+++|+|++ .++++++.+|.|++||+..... . .....+..| ...+.+++|+| ++..+++
T Consensus 50 ~~~~h~~~v~~~~~s~~~----~~l~s~s~d~~v~vwd~~~~~~-~-~~~~~~~~~-----~~~v~~~~~~~-~~~~l~~ 117 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKS----NRIVTCSQDRNAYVYEKRPDGT-W-KQTLVLLRL-----NRAATFVRWSP-NEDKFAV 117 (377)
T ss_dssp CBCCCSSCEEEEEECTTT----CCEEEEETTSSEEEC------C-C-CCEEECCCC-----SSCEEEEECCT-TSSCCEE
T ss_pred EEecCCceEEEEEEeCCC----CEEEEEeCCCeEEEEEcCCCCc-e-eeeeEeccc-----CCceEEEEECC-CCCEEEE
Confidence 356899999999999984 6899999999999999986520 0 011222222 23467899999 4557787
Q ss_pred EecccceEEEEeCCcc-----eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCccc-------------
Q 017601 167 ARSFSKSIDVYDQDIH-----LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKE------------- 228 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~------------- 228 (369)
+ +.|++|++||.... .+.+.. .+...+..+.+ +|++..|++++.|++|++||+++.+
T Consensus 118 ~-~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 118 G-SGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDW---HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp E-ESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEE---CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred E-ecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEE---cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccc
Confidence 7 89999999998643 222221 14445555553 3456788899999999999986321
Q ss_pred --CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCcee----eeeccccccCceEEEEEcCCCCCEEEE
Q 017601 229 --NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSA----LSRWVHCSKYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 229 --~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~----~~~~~~h~~~~v~~l~~sp~d~~~l~s 301 (369)
..+++..+ .+ ...|++++|+|++ +|++|+.|++|++||+++++. +..+.+| ...|++++|+| ++++|++
T Consensus 193 ~~~~~~~~~~-~~-~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~s~-~~~~l~~ 268 (377)
T 3dwl_C 193 LPFNTVCAEY-PS-GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS-QLPLRSLLWAN-ESAIVAA 268 (377)
T ss_dssp CCEEEEEECC-CC-SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS-SSCEEEEEEEE-TTEEEEE
T ss_pred cchhhhhhcc-cC-CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC-CCceEEEEEcC-CCCEEEE
Confidence 11455556 44 5889999999999 999999999999999999887 8889999 99999999999 9999999
Q ss_pred EECCCeEEEEECc
Q 017601 302 QGVDYEVFCGQWR 314 (369)
Q Consensus 302 ~s~D~~i~vwd~~ 314 (369)
++.|+.+ +|+..
T Consensus 269 ~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 269 GYNYSPI-LLQGN 280 (377)
T ss_dssp ESSSSEE-EECCC
T ss_pred EcCCcEE-EEEeC
Confidence 8877666 66654
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=3.6e-28 Score=230.61 Aligned_cols=246 Identities=14% Similarity=0.092 Sum_probs=183.7
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
...+.++++|+. ..++++++.+|.|.+|++...... ......+..| ...+.+++|+|.++.+++++ +.|+
T Consensus 35 ~~~~~~~~~~~~---~~~~~~~~~~g~i~v~~~~~~~~~-~~~~~~~~~h-----~~~V~~~~~~p~~~~~l~s~-s~dg 104 (402)
T 2aq5_A 35 WDSGFCAVNPKF---MALICEASGGGAFLVLPLGKTGRV-DKNVPLVCGH-----TAPVLDIAWCPHNDNVIASG-SEDC 104 (402)
T ss_dssp CSSCSEEECSSE---EEEEBCCSSSCCEEEEETTCCEEC-CTTCCCBCCC-----SSCEEEEEECTTCTTEEEEE-ETTS
T ss_pred cCCCcEEECCCe---EEEEEEEcCCCEEEEEECccCCCC-CCCCceEecC-----CCCEEEEEeCCCCCCEEEEE-eCCC
Confidence 345568888862 345556788999999998654211 0111112222 34577999999666788888 8999
Q ss_pred eEEEEeCCcc---------eEEEEeeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCcccCCceeeee--eccC
Q 017601 173 SIDVYDQDIH---------LRTLRTLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRMKENGGCLHRI--CGSV 240 (369)
Q Consensus 173 ~i~lwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~~~~~~~~~~~--~~~~ 240 (369)
+|++||.... +..+ ..|...+..+.+. |++ ..|++++.|++|+|||++++ +++..+ ..+
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~---p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~- 175 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITL--EGHTKRVGIVAWH---PTAQNVLLSAGCDNVILVWDVGTG---AAVLTLGPDVH- 175 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEE--ECCSSCEEEEEEC---SSBTTEEEEEETTSCEEEEETTTT---EEEEEECTTTC-
T ss_pred eEEEEEccCCCCccccCCceEEe--cCCCCeEEEEEEC---cCCCCEEEEEcCCCEEEEEECCCC---CccEEEecCCC-
Confidence 9999998532 2222 2355556666543 344 47888999999999999988 777777 444
Q ss_pred CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeec-cccccCc-eEEEEEcCCCCCEEEEE---ECCCeEEEEECc
Q 017601 241 GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRW-VHCSKYE-ITGLSFSSIDSNYIYVQ---GVDYEVFCGQWR 314 (369)
Q Consensus 241 ~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~-~~h~~~~-v~~l~~sp~d~~~l~s~---s~D~~i~vwd~~ 314 (369)
...|++++|+|++ +|++++.|+.|++||+++++.+..+ .+| ... +.++.|+| ++.+|+++ +.|+.|++||++
T Consensus 176 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPH-EGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSS-CSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCC-CCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCc
Confidence 6899999999999 9999999999999999999999998 788 655 99999999 99999998 799999999998
Q ss_pred CCce-eEEEE--cCCCeeeeeEcCCCCEEE-EEeCCCcEEEEECCCCcc
Q 017601 315 ESSK-VFAFR--GDSNWLGFSKCSNRDVLG-GWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 315 ~~~~-~~~~~--g~~~~~~~~~~~d~~~l~-sgs~dg~I~iWd~~~~~~ 359 (369)
+.+. +..+. .+.....+...+++.+|+ +|+.||.|++||+.+++.
T Consensus 254 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 254 HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp BCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred cccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 8654 33333 233234455577888886 666899999999998764
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7.4e-28 Score=222.26 Aligned_cols=254 Identities=15% Similarity=0.100 Sum_probs=193.6
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCce-eEEEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS-MAAVA 167 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~-~~a~~ 167 (369)
.+|.+.|.+++|+|++ ..+++++.+|.|++|++......... .....| ...+.+++|+|+ +. .++++
T Consensus 8 ~~h~~~v~~~~~s~~~----~~l~~~~~d~~v~iw~~~~~~~~~~~--~~~~~~-----~~~v~~~~~~~~-~~~~l~~~ 75 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSK----SLLLITSWDGSLTVYKFDIQAKNVDL--LQSLRY-----KHPLLCCNFIDN-TDLQIYVG 75 (342)
T ss_dssp SCCSSCEEEEEEEGGG----TEEEEEETTSEEEEEEEETTTTEEEE--EEEEEC-----SSCEEEEEEEES-SSEEEEEE
T ss_pred cCCCCcEEEEEEcCCC----CEEEEEcCCCeEEEEEeCCCCccccc--eeeeec-----CCceEEEEECCC-CCcEEEEE
Confidence 4899999999999983 68899999999999999865211101 111122 234678999995 55 77777
Q ss_pred ecccceEEEEeC-Ccc-eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCc---------ccCCceeeee
Q 017601 168 RSFSKSIDVYDQ-DIH-LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRM---------KENGGCLHRI 236 (369)
Q Consensus 168 ~s~d~~i~lwd~-~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~---------~~~~~~~~~~ 236 (369)
+.|+.|++||. ... ...+....+...+..+.+. + +..+++++.|+.|++||+++ + +++..+
T Consensus 76 -~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~---~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~ 147 (342)
T 1yfq_A 76 -TVQGEILKVDLIGSPSFQALTNNEANLGICRICKY---G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKN---LNSNNT 147 (342)
T ss_dssp -ETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEE---T-TTEEEEEETTSEEEEECHHHHTTBCEEEEE---SCSSSS
T ss_pred -cCCCeEEEEEeccCCceEeccccCCCCceEEEEeC---C-CCEEEEEcCCCeEEEEcccccccccccccC---CeeeEE
Confidence 89999999998 643 2222210144555555543 3 56899999999999999987 5 566666
Q ss_pred eccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCC-cee--eeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEEC
Q 017601 237 CGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRR-WSA--LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQW 313 (369)
Q Consensus 237 ~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~-~~~--~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~ 313 (369)
.+. ..|++++|+|++ +++++.|+.|++||+++ +.. ......| ...|.+++|+|.+++++++++.|+.|++||+
T Consensus 148 ~~~--~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 148 KVK--NKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGL-KYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp SSC--CCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSC-SSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred eeC--CceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCC-CCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 654 899999999988 99999999999999998 543 2344567 8899999999856789999999999999999
Q ss_pred cCC------ceeEEEEcCCC----------eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccC
Q 017601 314 RES------SKVFAFRGDSN----------WLGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGL 367 (369)
Q Consensus 314 ~~~------~~~~~~~g~~~----------~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~ 367 (369)
+.. +....+.+|.. ...+...+++.+|++++.||.|++||+.+++. +..+.+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~ 292 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-IKNFAKF 292 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-EEECCCC
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-hhhhhcc
Confidence 886 88889988852 23444467999999999999999999998764 4445554
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=2.8e-28 Score=229.97 Aligned_cols=260 Identities=17% Similarity=0.145 Sum_probs=193.1
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCcc-ccccccCCCCCCCCCCeeEEEECCC---Cc--
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDR-LTYSVLPQDCGVGEGSWSGLCFSPS---QW-- 161 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~p~---~~-- 161 (369)
+.+|.+.|++++|+|+ ++++++.+|.|++|++......... ....+..| ...+.+++|+|+ ++
T Consensus 12 ~~~h~~~i~~~~~~~~------~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 12 GKAHDADIFSVSACNS------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVH-----KSGLHHVDVLQAIERDAFE 80 (397)
T ss_dssp SSCSSSCEEEEEECSS------EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECC-----TTCEEEEEEEEEEETTTEE
T ss_pred hhhhhcCeEEEEecCC------eEEEEcCCCEEEEEECCCcccccCCCcceEEecC-----CCcEEEEEEecccccCCcc
Confidence 5689999999999873 8999999999999999865311000 11222222 234678999995 15
Q ss_pred -eeEEEEecccceEEEEeCCc--c-----eEEEEeeeC---CcceeeeccCCCC-CCCCc-EEEEEcCCeEEEEeCCc--
Q 017601 162 -SMAAVARSFSKSIDVYDQDI--H-----LRTLRTLWY---PSSLNFVQNLSPV-NGGPN-MLAVTEGCQLTIWDLRM-- 226 (369)
Q Consensus 162 -~~~a~~~s~d~~i~lwd~~~--~-----~~~~~~~~~---~~~v~~~~~~~~~-~~~~~-lla~s~d~~v~iwD~~~-- 226 (369)
.+++++ +.|+.|++||... . ...+..... ...+..+.+.+.. +++.. |++++.|+.|++||+++
T Consensus 81 ~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 81 LCLVATT-SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp EEEEEEE-ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred ccEEEEE-cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccc
Confidence 677877 8999999999742 2 333322210 1444444433110 35667 88899999999999998
Q ss_pred ----ccCCceee-----eeec-------cCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccc---cc--cCc
Q 017601 227 ----KENGGCLH-----RICG-------SVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVH---CS--KYE 285 (369)
Q Consensus 227 ----~~~~~~~~-----~~~~-------~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~---h~--~~~ 285 (369)
+ ..+. .+.. + ...|++++|+|++.|++|+.|+.|++||+++++++..+.. |. ...
T Consensus 160 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 160 DESNS---LTLNWSPTLELQGTVESPMTP-SQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp SHHHH---TTTCCCCEEEEEEEECCSSSS-CCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred ccccc---ceeeccCcceeeeeeccccCC-CCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc
Confidence 5 3444 5532 3 5889999999999888999999999999999999988887 41 468
Q ss_pred eEEEEEcCCCCCEEEEEECC---CeEEEEECcCCceeEEEEc-------------CCCe-eeeeEcCCCCEEEEEeCCCc
Q 017601 286 ITGLSFSSIDSNYIYVQGVD---YEVFCGQWRESSKVFAFRG-------------DSNW-LGFSKCSNRDVLGGWSDSGS 348 (369)
Q Consensus 286 v~~l~~sp~d~~~l~s~s~D---~~i~vwd~~~~~~~~~~~g-------------~~~~-~~~~~~~d~~~l~sgs~dg~ 348 (369)
|.+++|+| ++++|++++.| +.|++||+++++.+..+.+ |... ..+...+++.+|++++.||.
T Consensus 236 i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 236 IRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp EEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 99999999 99999999999 9999999999999999988 7632 23444679999999999999
Q ss_pred EEEEECCCCcchhhhcc
Q 017601 349 IFVADVVAKENEISALK 365 (369)
Q Consensus 349 I~iWd~~~~~~~~~~l~ 365 (369)
|++||+++++. +..+.
T Consensus 315 i~iwd~~~~~~-~~~~~ 330 (397)
T 1sq9_A 315 LRFWDVKTKER-ITTLN 330 (397)
T ss_dssp EEEEETTTTEE-EEEEE
T ss_pred EEEEEcCCCce-eEEEe
Confidence 99999988753 34444
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.2e-26 Score=211.71 Aligned_cols=247 Identities=12% Similarity=0.098 Sum_probs=181.0
Q ss_pred cccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 86 LNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 86 ~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
+...+|...|++++|+|++ ..+++++.+|.|++|++.++. .......|.. .+..+++. +..++
T Consensus 61 ~~~~~~~~~V~~v~~~~~~----~~l~sgs~Dg~v~iw~~~~~~-----~~~~~~~h~~-----~~~~~~~~---~~~l~ 123 (318)
T 4ggc_A 61 LQMEQPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQK-----RLRNMTSHSA-----RVGSLSWN---SYILS 123 (318)
T ss_dssp EECCSTTCCEEEEEECTTS----SEEEEEETTSEEEEEETTTTE-----EEEEEECCSS-----CEEEEEEE---TTEEE
T ss_pred EEecCCCCeEEEEEECCCC----CEEEEEECCCcEEEeecCCce-----eEEEecCccc-----eEEEeecC---CCEEE
Confidence 3456899999999999984 789999999999999998651 1122223322 13234433 34677
Q ss_pred EEecccceEEEEeCCcceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCce-eeeeeccCCCc
Q 017601 166 VARSFSKSIDVYDQDIHLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGC-LHRICGSVGDI 243 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~-~~~~~~~~~~~ 243 (369)
++ +.++.+++|+.......+... .+...+..... .+++..+++++.|++|+|||+++++.... ......+ ...
T Consensus 124 s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~ 198 (318)
T 4ggc_A 124 SG-SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW---APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGA 198 (318)
T ss_dssp EE-ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCC-CSC
T ss_pred EE-ecCCceEeeecCCCceeEEEEcCccCceEEEEE---cCCCCEEEEEecCcceeEEECCCCcccccceeeeccc-CCc
Confidence 77 899999999876433333222 23444444443 24567889999999999999998742222 2223333 588
Q ss_pred EEEEEECCCC----cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE--CCCeEEEEECcCCc
Q 017601 244 LYAVCSSSTG----NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG--VDYEVFCGQWRESS 317 (369)
Q Consensus 244 v~~v~~sp~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s--~D~~i~vwd~~~~~ 317 (369)
|.+++++|++ .+++++.+++|++||.+......... + ...+..+.|+| ++..+++++ .|++|++||+++++
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~-~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-A-HSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-C-SSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCC
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-c-eeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCc
Confidence 9999999988 23567889999999999877766554 4 57899999999 888877665 79999999999999
Q ss_pred eeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 318 KVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 318 ~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
++..+.||... ..+..++|+.+|+|||.||+|+|||+.+.
T Consensus 276 ~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 276 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999843 23444779999999999999999999764
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=4.1e-28 Score=232.88 Aligned_cols=236 Identities=14% Similarity=0.118 Sum_probs=182.0
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|.+++|.+ ..+++++.+|.|++||+.++. ....+..| ...+.+++|++ ..+++
T Consensus 168 ~~~~h~~~v~~l~~~~------~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h-----~~~v~~l~~~~---~~l~s 228 (435)
T 1p22_A 168 ILTGHTGSVLCLQYDE------RVIITGSSDSTVRVWDVNTGE-----MLNTLIHH-----CEAVLHLRFNN---GMMVT 228 (435)
T ss_dssp EECCCSSCEEEEECCS------SEEEEEETTSCEEEEESSSCC-----EEEEECCC-----CSCEEEEECCT---TEEEE
T ss_pred EEcCCCCcEEEEEECC------CEEEEEcCCCeEEEEECCCCc-----EEEEEcCC-----CCcEEEEEEcC---CEEEE
Confidence 3568999999999932 589999999999999998652 11222222 23466899975 37787
Q ss_pred EecccceEEEEeCCcc--eEEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 167 ARSFSKSIDVYDQDIH--LRTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~--~~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
+ +.|++|++||.... ..... ...+...+..+.+ ++..+++++.|++|++||++++ +++..+..+ ...
T Consensus 229 ~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~-~~~ 298 (435)
T 1p22_A 229 C-SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-----DDKYIVSASGDRTIKVWNTSTC---EFVRTLNGH-KRG 298 (435)
T ss_dssp E-ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTTC---CEEEEEECC-SSC
T ss_pred e-eCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-----CCCEEEEEeCCCeEEEEECCcC---cEEEEEcCC-CCc
Confidence 7 89999999998532 22112 2234445555543 3578999999999999999988 788888866 688
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCc-----
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESS----- 317 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~----- 317 (369)
|.+++|+ + .+++|+.|++|++||+++++++.++.+| ...|++++| ++.+|++++.|++|++||++++.
T Consensus 299 v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 372 (435)
T 1p22_A 299 IACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAP 372 (435)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSC
T ss_pred EEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCC-cCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCcccc
Confidence 9999994 5 9999999999999999999999999999 999999999 45899999999999999997755
Q ss_pred ----eeEEEEcCCCeeeeeEc-CCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 318 ----KVFAFRGDSNWLGFSKC-SNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 318 ----~~~~~~g~~~~~~~~~~-~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
++..+.+|. ..+... .++.+|++|+.||+|++||+.+...
T Consensus 373 ~~~~~~~~~~~h~--~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 373 AGTLCLRTLVEHS--GRVFRLQFDEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp TTTTEEEEECCCS--SCCCCEEECSSCEEECCSSSEEEEEC------
T ss_pred ccchheeeccCCC--CCeEEEEeCCCEEEEEeCCCEEEEEECCCCCC
Confidence 788888887 333322 2889999999999999999987653
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-28 Score=235.79 Aligned_cols=285 Identities=12% Similarity=0.086 Sum_probs=195.5
Q ss_pred CeEEEEEEeC-Cchhh-hcCCCccccccCccc---cccc-ccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEE
Q 017601 51 CHLYKLQVMM-DDWFV-SEGKDSLLIPEQTPV---MDSS-MLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSK 124 (369)
Q Consensus 51 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~-~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~ 124 (369)
..|..+++.. .+..+ ..+.++.+..++... .... .....+|.+.|.+++|+|++ ..+++++.+|.|++||
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF----DAFAVSSKDGQIIVLK 139 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS----SEEEEEETTSEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC----CEEEEEeCCCEEEEEE
Confidence 4577777777 55555 445566554444432 1111 11123699999999999973 6899999999999999
Q ss_pred ecCC--CCCCcc------ccccccCCCCCCCCCCeeEEE--ECCCCceeEEEEecccceEEEEeCCc--ceEEEEeeeCC
Q 017601 125 LDTS--GKDVDR------LTYSVLPQDCGVGEGSWSGLC--FSPSQWSMAAVARSFSKSIDVYDQDI--HLRTLRTLWYP 192 (369)
Q Consensus 125 ~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~l~--~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~ 192 (369)
+... ...... ....+.+. + ....+.++. ++| ++.+++++ +.|++|++||... .+..+....+.
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~~~-~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~h~ 214 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNF--G-KNEYAVRMRAFVNE-EKSLLVAL-TNLSRVIIFDIRTLERLQIIENSPRH 214 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGG--S-SCCCEEEEEEEECS-SCEEEEEE-ETTSEEEEEETTTCCEEEEEECCGGG
T ss_pred eccccCCceeeccccceeEEEEccCc--c-cccCceEEEEEEcC-CCCEEEEE-eCCCeEEEEeCCCCeeeEEEccCCCC
Confidence 9521 110000 00111110 0 122344555 556 45677777 8999999999863 34444332134
Q ss_pred cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee-ccCCCcEEEEEEC----CCC-cEEEEeCCCcEEE
Q 017601 193 SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-GSVGDILYAVCSS----STG-NIAVAGADRTVTI 266 (369)
Q Consensus 193 ~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-~~~~~~v~~v~~s----p~g-~lasgs~D~~v~v 266 (369)
..+..+.+ +|++..|++++.|++|++||++++ +++..+. .+ ...|++++|+ |++ +|++|+.|++|++
T Consensus 215 ~~v~~~~~---s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~-~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 215 GAVSSICI---DEECCVLILGTTRGIIDIWDIRFN---VLIRSWSFGD-HAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp CCEEEEEE---CTTSCEEEEEETTSCEEEEETTTT---EEEEEEBCTT-CEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred CceEEEEE---CCCCCEEEEEcCCCeEEEEEcCCc---cEEEEEecCC-CCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 45555553 356778999999999999999987 7887765 33 4789999655 567 9999999999999
Q ss_pred EeCCCceeeeecccc-------------------------ccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 267 YDPRRWSALSRWVHC-------------------------SKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 267 wD~~~~~~~~~~~~h-------------------------~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
||+++++.+..+.+| +...|++++|++ +++|++++.|+.|++||++++++...
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN--DKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET--TEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECC--ceEEEecCCCCeEEEEECCCcccceE
Confidence 999998887776644 155688888884 58999999999999999999888888
Q ss_pred EEcC-------------------------------------CC-eeeeeEcCC--CCEEEEEeCCCcEEEEE
Q 017601 322 FRGD-------------------------------------SN-WLGFSKCSN--RDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 322 ~~g~-------------------------------------~~-~~~~~~~~d--~~~l~sgs~dg~I~iWd 353 (369)
+.+| .. ...+..+++ +.+|++|+.||.|+||+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8763 31 112222334 77999999999999995
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=8.3e-27 Score=224.20 Aligned_cols=254 Identities=14% Similarity=0.172 Sum_probs=194.4
Q ss_pred CCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCC
Q 017601 68 GKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVG 147 (369)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (369)
+.++.+..++..... ....+.+|.+.|.+++|++ ..+++++.+|.|++||+.++. ....+..|.
T Consensus 136 ~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~------~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~h~---- 199 (445)
T 2ovr_B 136 SDDNTLKVWSAVTGK-CLRTLVGHTGGVWSSQMRD------NIIISGSTDRTLKVWNAETGE-----CIHTLYGHT---- 199 (445)
T ss_dssp ETTSCEEEEETTTCC-EEEECCCCSSCEEEEEEET------TEEEEEETTSCEEEEETTTTE-----EEEEECCCS----
T ss_pred ECCCcEEEEECCCCc-EEEEEcCCCCCEEEEEecC------CEEEEEeCCCeEEEEECCcCc-----EEEEECCCC----
Confidence 344444433433332 2233568999999999974 389999999999999997551 122233332
Q ss_pred CCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcc
Q 017601 148 EGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMK 227 (369)
Q Consensus 148 ~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~ 227 (369)
..+.+++|++ ..++++ +.|++|++||............+...+..+.. ++..+++++.|+.|++||++++
T Consensus 200 -~~v~~~~~~~---~~l~s~-s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 200 -STVRCMHLHE---KRVVSG-SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp -SCEEEEEEET---TEEEEE-ETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-----CSSCEEEEETTSCEEEEEGGGT
T ss_pred -CcEEEEEecC---CEEEEE-eCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-----CCCEEEEEcCCCEEEEEECCCC
Confidence 2366788864 457777 89999999998643222222234445555553 4678999999999999999988
Q ss_pred cCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCC
Q 017601 228 ENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY 306 (369)
Q Consensus 228 ~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~ 306 (369)
+++..+..+ ...|++++| ++ .+++|+.|++|++||+++++.+.++.+| ...+.++.+++ +++++++.|+
T Consensus 270 ---~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~---~~l~~~~~dg 339 (445)
T 2ovr_B 270 ---TCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTSGMELKD---NILVSGNADS 339 (445)
T ss_dssp ---EEEEEECCC-SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC-CSCEEEEEEET---TEEEEEETTS
T ss_pred ---cEeEEecCC-CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC-cccEEEEEEeC---CEEEEEeCCC
Confidence 788888766 689999999 67 9999999999999999999999999999 89999888755 7999999999
Q ss_pred eEEEEECcCCceeEEEEc---CCCeeeeeEc-CCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 307 EVFCGQWRESSKVFAFRG---DSNWLGFSKC-SNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 307 ~i~vwd~~~~~~~~~~~g---~~~~~~~~~~-~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.|++||+++++++..+.+ |. ..+... .++.+|++|+.||.|++||+.+++.
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQ--SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCS--SCEEEEEECSSEEEEEETTSEEEEEETTTCCE
T ss_pred eEEEEECCCCcEEEEEccCCCCC--CCEEEEEECCCEEEEEeCCCeEEEEECCCCce
Confidence 999999999999999986 54 233332 2789999999999999999998864
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-27 Score=214.52 Aligned_cols=237 Identities=11% Similarity=0.103 Sum_probs=183.8
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+.+|.+.|++++| +++ ..+++++.+|.|++||+.... ....+..+ ...+.+++|+|+ ...+++
T Consensus 13 ~l~~h~~~v~~~~~-~~~----~~l~s~~~dg~v~vw~~~~~~-----~~~~~~~~-----~~~v~~~~~~~~-~~~l~~ 76 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDD----SKVASVSRDGTVRLWSKDDQW-----LGTVVYTG-----QGFLNSVCYDSE-KELLLF 76 (313)
T ss_dssp EECCCSSCEEEEEE-EET----TEEEEEETTSEEEEEEESSSE-----EEEEEEEC-----SSCEEEEEEETT-TTEEEE
T ss_pred HhhCCCCCcEEEEe-cCC----CEEEEEEcCCcEEEEECCCCE-----EEEEeecC-----CccEEEEEECCC-CCEEEE
Confidence 36789999999999 763 579999999999999996541 11122222 234678999994 557787
Q ss_pred EecccceEEEEeCCcc-----eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCC
Q 017601 167 ARSFSKSIDVYDQDIH-----LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVG 241 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~ 241 (369)
+ +.|+.|++|+.... ...+ ..+...+..+.+ ++..+++++.|++|++|| .+ ..+..+..+ .
T Consensus 77 ~-~~dg~i~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~-----~~~~l~~~~~d~~i~~~d--~~---~~~~~~~~~-~ 142 (313)
T 3odt_A 77 G-GKDTMINGVPLFATSGEDPLYTL--IGHQGNVCSLSF-----QDGVVISGSWDKTAKVWK--EG---SLVYNLQAH-N 142 (313)
T ss_dssp E-ETTSCEEEEETTCCTTSCC-CEE--CCCSSCEEEEEE-----ETTEEEEEETTSEEEEEE--TT---EEEEEEECC-S
T ss_pred e-cCCCeEEEEEeeecCCCCcccch--hhcccCEEEEEe-----cCCEEEEEeCCCCEEEEc--CC---cEEEecccC-C
Confidence 7 89999999997422 2222 223444444443 356899999999999999 33 566666665 6
Q ss_pred CcEEEEEECC-CC-cEEEEeCCCcEEEEeCCCceeeeeccc-cccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCce
Q 017601 242 DILYAVCSSS-TG-NIAVAGADRTVTIYDPRRWSALSRWVH-CSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSK 318 (369)
Q Consensus 242 ~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~~~~~~~~~~-h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~ 318 (369)
..+.+++|+| ++ .+++++.|+.|++|| ..+....+.. | ...|.+++|+| ++. +++++.|+.|++||+++++.
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~-~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIH-NDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSC-SSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCE
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccC-cccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhh
Confidence 8999999988 77 999999999999999 5566777777 6 89999999999 877 99999999999999999999
Q ss_pred eEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 319 VFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 319 ~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+..+.+|... ..+...+++ .|++++.||.|++||+++++.
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCE
T ss_pred hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCce
Confidence 9999988732 233345677 689999999999999988863
No 84
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=222.64 Aligned_cols=225 Identities=12% Similarity=0.076 Sum_probs=168.2
Q ss_pred ceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEE--
Q 017601 108 YMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRT-- 185 (369)
Q Consensus 108 ~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~-- 185 (369)
..++++++.+|.|++||+.++.. + ..+. ...+..++|+|. ++++ +.|++|++|+....+..
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~-~----~~~~-------~~~v~~~~~~~~----~~s~-s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKT-I----TTIT-------TPNPRTGGEHPA----IISR-GPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSC-E----EEEE-------EECCCTTCCCCS----EEEE-CSTTEEEEEETTTEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcE-E----EEEe-------cCCceeeeeCCc----eEEe-cCCCeEEEEEccCceEEee
Confidence 47999999999999999986521 1 1111 012335788884 7777 89999999987643211
Q ss_pred ------EEee--eCCcceeeeccCCCCC--CCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-c
Q 017601 186 ------LRTL--WYPSSLNFVQNLSPVN--GGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-N 254 (369)
Q Consensus 186 ------~~~~--~~~~~v~~~~~~~~~~--~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~ 254 (369)
++.. .+...+..+.+ .| ++..+++++.|++|++||++++ +++.....+....|++++|+|+| +
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYG---HNEVNTEYFIWADNRGTIGFQSYEDD---SQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEEC---CC---CCEEEEEETTCCEEEEESSSS---CEEEEECCCSSCCCCEEEECTTSCE
T ss_pred cCCcceeEEeecCCCCCEEEEEc---CCCCCCCEEEEEeCCCcEEEEECCCC---cEEEEEecCCCCceEEEEECCCCCE
Confidence 1111 23344555553 34 5678999999999999999988 66555533324679999999999 9
Q ss_pred EEEEeCCCcEEEEeCCCceee-eeccc-cccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc---CCCe-
Q 017601 255 IAVAGADRTVTIYDPRRWSAL-SRWVH-CSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG---DSNW- 328 (369)
Q Consensus 255 lasgs~D~~v~vwD~~~~~~~-~~~~~-h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g---~~~~- 328 (369)
|++|+.|++|++||+++++.+ ..+.+ | ...|++++|+| ++.+|++++ |++|++||+++.+....+.. |...
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVDE-EAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKT 261 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCCT-TSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEeccC-CCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccc
Confidence 999999999999999999887 78888 8 99999999999 999999999 55999999998766544332 2210
Q ss_pred --eeeeEcCCCCEEEEEeC-CCcEEEEECCCCc
Q 017601 329 --LGFSKCSNRDVLGGWSD-SGSIFVADVVAKE 358 (369)
Q Consensus 329 --~~~~~~~d~~~l~sgs~-dg~I~iWd~~~~~ 358 (369)
..+...+++.+|++++. |+.|++|++.+..
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 12555779999999998 9999999986654
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.2e-27 Score=222.75 Aligned_cols=247 Identities=11% Similarity=0.081 Sum_probs=186.5
Q ss_pred cccCCccceee--EEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCcee
Q 017601 86 LNRCPHRSEVQ--SIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSM 163 (369)
Q Consensus 86 ~~~~~H~~~V~--~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 163 (369)
+...+|.+.+. +++|+++ .+++++.+|.|++|++.++.. ...... .....+.+++|+| ++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~s~~------~l~~~~~d~~v~lw~~~~~~~-----~~~~~~----~~~~~v~~v~~s~-~~~~ 148 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSNL------NVVAVALERNVYVWNADSGSV-----SALAET----DESTYVASVKWSH-DGSF 148 (401)
T ss_dssp EECTTCCCCTTCBCEEECTT------SEEEEEETTEEEEEETTTCCE-----EEEEEC----CTTCCEEEEEECT-TSSE
T ss_pred eeCCCCcCCceEEEEeecCC------CEEEEECCCeEEEeeCCCCcE-----eEeeec----CCCCCEEEEEECC-CCCE
Confidence 33456776654 4555543 355666889999999986521 111111 0123477999999 4567
Q ss_pred EEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 164 AAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 164 ~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
++++ +.|+.|++||............+...+..+.+ ++..+++++.|++|++||++... ..+..+..+ ...
T Consensus 149 l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~-~~~ 219 (401)
T 4aez_A 149 LSVG-LGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-----NRHVLSSGSRSGAIHHHDVRIAN--HQIGTLQGH-SSE 219 (401)
T ss_dssp EEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTSSS--CEEEEEECC-SSC
T ss_pred EEEE-CCCCeEEEEECcCCeEEEEecCCCCceEEEEE-----CCCEEEEEcCCCCEEEEecccCc--ceeeEEcCC-CCC
Confidence 7887 88999999998643222222234455555553 24688889999999999999542 566677766 689
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE--CCCeEEEEECcCCceeE
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG--VDYEVFCGQWRESSKVF 320 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s--~D~~i~vwd~~~~~~~~ 320 (369)
|.+++|+|++ +|++|+.|++|++||+++++++..+.+| ...|.+++|+|....++++++ .|+.|++||+++++++.
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 9999999999 9999999999999999999999999999 999999999993345666665 79999999999999999
Q ss_pred EEEcCCCeeeeeEcCCCCEEEE--EeCCCcEEEEECCCCc
Q 017601 321 AFRGDSNWLGFSKCSNRDVLGG--WSDSGSIFVADVVAKE 358 (369)
Q Consensus 321 ~~~g~~~~~~~~~~~d~~~l~s--gs~dg~I~iWd~~~~~ 358 (369)
.+..+.....+...+++.+|++ |+.||.|++||+.+++
T Consensus 299 ~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 299 TVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE
T ss_pred EEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc
Confidence 9987765556666789999998 4489999999998864
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=2.1e-27 Score=244.56 Aligned_cols=249 Identities=12% Similarity=0.096 Sum_probs=197.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|.+++|+|++ ..+++++.+|.|.+||+.++. ....+..|. ..+.+++|+| ++..++++
T Consensus 9 ~~~h~~~v~~i~~sp~~----~~la~~~~~g~v~iwd~~~~~-----~~~~~~~~~-----~~v~~~~~s~-~~~~l~~~ 73 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTE----PWVLTTLYSGRVEIWNYETQV-----EVRSIQVTE-----TPVRAGKFIA-RKNWIIVG 73 (814)
T ss_dssp EEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE-----EEEEEECCS-----SCEEEEEEEG-GGTEEEEE
T ss_pred eecCCCceEEEEECCCC----CEEEEEeCCCEEEEEECCCCc-----eEEEEecCC-----CcEEEEEEeC-CCCEEEEE
Confidence 46899999999999984 689999999999999987541 112222232 3467899999 45678887
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|+.|++||............+...+..+.+ +|++..+++++.|++|++||++++. .....+..+ ...|.++
T Consensus 74 -~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~-~~~v~~~ 146 (814)
T 3mkq_A 74 -SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGH-EHFVMCV 146 (814)
T ss_dssp -ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECC-SSCEEEE
T ss_pred -eCCCeEEEEECCCCcEEEEEecCCCCEEEEEE---eCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCC-CCcEEEE
Confidence 78999999997643322222335555555554 3456789999999999999998762 455566655 6889999
Q ss_pred EECC-CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCC-CCCEEEEEECCCeEEEEECcCCceeEEEEc
Q 017601 248 CSSS-TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI-DSNYIYVQGVDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 248 ~~sp-~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~-d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g 324 (369)
+|+| ++ .|++++.|++|++||+++++....+..+....+..++|+|. ++.+|++++.|+.|++||+++++++..+.+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 9999 77 99999999999999999988888887763589999999973 678999999999999999999999999998
Q ss_pred CCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 325 DSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 325 ~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|... ..+..++++.+|++++.||.|++||+.+++
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 8732 234447799999999999999999998865
No 87
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=5e-27 Score=225.27 Aligned_cols=237 Identities=13% Similarity=0.088 Sum_probs=184.4
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|...|.++++.. ..+++++.+|.|++||+.+.. ....+..|. ..+.+++| ++..++++
T Consensus 129 ~~~~~~~v~~~~~d~------~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~-----~~v~~l~~---~~~~l~sg 189 (435)
T 1p22_A 129 RSETSKGVYCLQYDD------QKIVSGLRDNTIKIWDKNTLE-----CKRILTGHT-----GSVLCLQY---DERVIITG 189 (435)
T ss_dssp CCSSCCCEEEEECCS------SEEEEEESSSCEEEEESSSCC-----EEEEECCCS-----SCEEEEEC---CSSEEEEE
T ss_pred ccCCCCcEEEEEECC------CEEEEEeCCCeEEEEeCCCCe-----EEEEEcCCC-----CcEEEEEE---CCCEEEEE
Confidence 346778899998832 589999999999999987542 122233332 34667888 34578887
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
+.|++|++||............+...+..+.+ +++.+++++.|++|++||++++........+.++ ...|+++
T Consensus 190 -~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 262 (435)
T 1p22_A 190 -SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVV 262 (435)
T ss_dssp -ETTSCEEEEESSSCCEEEEECCCCSCEEEEEC-----CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCC-SSCEEEE
T ss_pred -cCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE-----cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC-CCcEEEE
Confidence 89999999998643222222234455555553 2458999999999999999987322222455555 6899999
Q ss_pred EECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC
Q 017601 248 CSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS 326 (369)
Q Consensus 248 ~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~ 326 (369)
+| ++ .|++|+.|++|++||+++++.+.++.+| ...|.++.|++ +++++++.|++|++||+++++++..+.+|.
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~ 336 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH-KRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHE 336 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCC-CCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCEEEEEeCCc
Confidence 99 66 9999999999999999999999999999 99999999954 899999999999999999999999999998
Q ss_pred CeeeeeE-cCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 327 NWLGFSK-CSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 327 ~~~~~~~-~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
..+.. ..++.+|++|+.||.|++||+.+++
T Consensus 337 --~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 337 --ELVRCIRFDNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp --SCEEEEECCSSEEEEEETTSCEEEEEHHHHT
T ss_pred --CcEEEEEecCCEEEEEeCCCcEEEEECCCCC
Confidence 33333 2389999999999999999997654
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=3.5e-27 Score=234.64 Aligned_cols=255 Identities=16% Similarity=0.121 Sum_probs=196.3
Q ss_pred cCCccce-eeEEEEee--cCCCCceEEEEEecCCcEEEEEecCCCCC--C-ccccccccCCCCCCCCCCeeEEEECCCCc
Q 017601 88 RCPHRSE-VQSIALAE--TDSSGYMVLGSVDSYGHLIVSKLDTSGKD--V-DRLTYSVLPQDCGVGEGSWSGLCFSPSQW 161 (369)
Q Consensus 88 ~~~H~~~-V~~l~~s~--~~~~~~~~las~d~~g~v~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~~p~~~ 161 (369)
+.+|.+. |++++|+| ++ .++++++.+|.|++|++..+... . ......+..+ ...+.+++|+|++
T Consensus 59 ~~~h~~~~v~~~~~sp~~~~----~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~- 128 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFSPIKGS----QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL-----AGPISDISWDFEG- 128 (615)
T ss_dssp ECTTTTSCEEEEEECSSTTC----CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-----SSCEEEEEECTTS-
T ss_pred EecCCCceEEEEEECcCCCC----CEEEEecCCCEEEEEeCCCCcccccccccccchhhcc-----cccEEEEEEeCCC-
Confidence 5689999 99999999 84 79999999999999999633000 0 0111122222 2347789999955
Q ss_pred eeEEEEeccc----ceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEEeCCcccCCceeeee
Q 017601 162 SMAAVARSFS----KSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 162 ~~~a~~~s~d----~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iwD~~~~~~~~~~~~~ 236 (369)
..++++ +.+ +.|.+||.+.....+. .+...+..+.+ +|++. .+++++.|+.|++||++++ +.+..+
T Consensus 129 ~~l~~~-~~~~~~~~~v~~~d~~~~~~~~~--~~~~~v~~~~~---~~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~ 199 (615)
T 1pgu_A 129 RRLCVV-GEGRDNFGVFISWDSGNSLGEVS--GHSQRINACHL---KQSRPMRSMTVGDDGSVVFYQGPPF---KFSASD 199 (615)
T ss_dssp SEEEEE-ECCSSCSEEEEETTTCCEEEECC--SCSSCEEEEEE---CSSSSCEEEEEETTTEEEEEETTTB---EEEEEE
T ss_pred CEEEEe-ccCCCCccEEEEEECCCcceeee--cCCccEEEEEE---CCCCCcEEEEEeCCCcEEEEeCCCc---ceeeee
Confidence 466666 555 7999999766555543 24444555553 34454 6888999999999999988 778888
Q ss_pred eccCCC---cEEEEEECCC-C-cEEEEeCCCcEEEEeCCCceeeeec-c---ccccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 237 CGSVGD---ILYAVCSSST-G-NIAVAGADRTVTIYDPRRWSALSRW-V---HCSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 237 ~~~~~~---~v~~v~~sp~-g-~lasgs~D~~v~vwD~~~~~~~~~~-~---~h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
..+ .. .|++++|+|+ + +|++++.|+.|++||+++++.+..+ . +| ...|.+++|+ ++++|++++.|+.
T Consensus 200 ~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 200 RTH-HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV-QGGIFALSWL--DSQKFATVGADAT 275 (615)
T ss_dssp CSS-SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC-CSCEEEEEES--SSSEEEEEETTSE
T ss_pred ccc-CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccccc-CCceEEEEEc--CCCEEEEEcCCCc
Confidence 766 46 8999999999 8 9999999999999999999999998 6 78 9999999999 8899999999999
Q ss_pred EEEEECcCCceeEEEEcCC-----CeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccC
Q 017601 308 VFCGQWRESSKVFAFRGDS-----NWLGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGL 367 (369)
Q Consensus 308 i~vwd~~~~~~~~~~~g~~-----~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~ 367 (369)
|++||+++++.+..+..+. ....+. .+++.++++++.||.|++||+.+++. +..+.+|
T Consensus 276 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~g~i~~~d~~~~~~-~~~~~~~ 338 (615)
T 1pgu_A 276 IRVWDVTTSKCVQKWTLDKQQLGNQQVGVV-ATGNGRIISLSLDGTLNFYELGHDEV-LKTISGH 338 (615)
T ss_dssp EEEEETTTTEEEEEEECCTTCGGGCEEEEE-EEETTEEEEEETTSCEEEEETTEEEE-EEEECCC
T ss_pred EEEEECCCCcEEEEEcCCCCcccCceeEEE-eCCCCeEEEEECCCCEEEEECCCCcE-EEEEeCC
Confidence 9999999999999998762 111222 23889999999999999999987543 4445544
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3.5e-27 Score=217.75 Aligned_cols=240 Identities=11% Similarity=0.065 Sum_probs=180.0
Q ss_pred cCCccceeeEEEEeecCCCCce-EEEEEecCCcEEEEEe-cCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYM-VLGSVDSYGHLIVSKL-DTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~-~las~d~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
..+|...|.+++|+|++ . .+++++.+|.|++|++ .... ...+... .....+.+++|+| ...++
T Consensus 52 ~~~~~~~v~~~~~~~~~----~~~l~~~~~dg~i~~wd~~~~~~------~~~~~~~---~~~~~v~~l~~~~--~~~l~ 116 (342)
T 1yfq_A 52 SLRYKHPLLCCNFIDNT----DLQIYVGTVQGEILKVDLIGSPS------FQALTNN---EANLGICRICKYG--DDKLI 116 (342)
T ss_dssp EEECSSCEEEEEEEESS----SEEEEEEETTSCEEEECSSSSSS------EEECBSC---CCCSCEEEEEEET--TTEEE
T ss_pred eeecCCceEEEEECCCC----CcEEEEEcCCCeEEEEEeccCCc------eEecccc---CCCCceEEEEeCC--CCEEE
Confidence 44899999999999983 6 8899999999999998 6441 1222220 0123467899999 45777
Q ss_pred EEecccceEEEEeCCcc--------eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCc-ccCCceeeee
Q 017601 166 VARSFSKSIDVYDQDIH--------LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRM-KENGGCLHRI 236 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~-~~~~~~~~~~ 236 (369)
++ +.|+.|++||.... .+.+....+...+..+.+. ++ .+++++.|+.|++||+++ +.. ......
T Consensus 117 s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~l~~~~~d~~i~i~d~~~~~~~-~~~~~~ 189 (342)
T 1yfq_A 117 AA-SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN---SS--RLIVGMNNSQVQWFRLPLCEDD-NGTIEE 189 (342)
T ss_dssp EE-ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC---SS--EEEEEESTTEEEEEESSCCTTC-CCEEEE
T ss_pred EE-cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec---CC--cEEEEeCCCeEEEEECCccccc-cceeee
Confidence 77 89999999996430 1112222244444444432 32 388899999999999998 521 111222
Q ss_pred eccCCCcEEEEEECC-CC-cEEEEeCCCcEEEEeCCCc------eeeeeccccccC---------ceEEEEEcCCCCCEE
Q 017601 237 CGSVGDILYAVCSSS-TG-NIAVAGADRTVTIYDPRRW------SALSRWVHCSKY---------EITGLSFSSIDSNYI 299 (369)
Q Consensus 237 ~~~~~~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~~------~~~~~~~~h~~~---------~v~~l~~sp~d~~~l 299 (369)
..+ ...|.+++|+| ++ ++++|+.|+.|++||++.. +....+..| .. .|++++|+| ++++|
T Consensus 190 ~~~-~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~s~-~~~~l 266 (342)
T 1yfq_A 190 SGL-KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH-RLNLKDTNLAYPVNSIEFSP-RHKFL 266 (342)
T ss_dssp CSC-SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC-CCCTTCCSSCCCEEEEEECT-TTCCE
T ss_pred cCC-CCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc-cccccccccceeEEEEEEcC-CCCEE
Confidence 222 48899999999 99 9999999999999999887 777788887 55 999999999 99999
Q ss_pred EEEECCCeEEEEECcCCceeEEEEcC-CCeeeeeEcCCCCEEEEEeCCCc-EEEEE
Q 017601 300 YVQGVDYEVFCGQWRESSKVFAFRGD-SNWLGFSKCSNRDVLGGWSDSGS-IFVAD 353 (369)
Q Consensus 300 ~s~s~D~~i~vwd~~~~~~~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~-I~iWd 353 (369)
++++.|+.|++||+++++++..+.+| ........ +++.+|++++.||. .+.|.
T Consensus 267 ~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 267 YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEECTHHHHCSS
T ss_pred EEecCCceEEEEcCccHhHhhhhhcccCCCceEec-CCCCeEEEEecCCccccccc
Confidence 99999999999999999999999988 63322222 79999999999998 44444
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=9.4e-27 Score=250.53 Aligned_cols=246 Identities=19% Similarity=0.180 Sum_probs=195.7
Q ss_pred cccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 86 LNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 86 ~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
+.+.+|.+.|++++|+|++ ..+++++.+|.|++||+.++. ....+..|. ..+.+++|+|+ +.+++
T Consensus 609 ~~~~~h~~~v~~~~~s~~~----~~l~s~~~d~~i~vw~~~~~~-----~~~~~~~h~-----~~v~~~~~s~~-~~~l~ 673 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDG----QRIASCGADKTLQVFKAETGE-----KLLDIKAHE-----DEVLCCAFSSD-DSYIA 673 (1249)
T ss_dssp EEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCC-----EEEEECCCS-----SCEEEEEECTT-SSEEE
T ss_pred EEEecccccEEEEEECCCC----CEEEEEeCCCeEEEEECCCCC-----EEEEeccCC-----CCEEEEEEecC-CCEEE
Confidence 3456899999999999984 789999999999999998652 122233332 34679999995 55788
Q ss_pred EEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCc
Q 017601 166 VARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
++ +.|++|++||... .+..+. .+...+..+.+.+.+ +...+++++.|++|++||++++ .++..+.++ ...
T Consensus 674 s~-~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~---~~~~~~~~h-~~~ 745 (1249)
T 3sfz_A 674 TC-SADKKVKIWDSATGKLVHTYD--EHSEQVNCCHFTNKS-NHLLLATGSNDFFLKLWDLNQK---ECRNTMFGH-TNS 745 (1249)
T ss_dssp EE-ETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECSSS-SCCEEEEEETTSCEEEEETTSS---SEEEEECCC-SSC
T ss_pred EE-eCCCeEEEEECCCCceEEEEc--CCCCcEEEEEEecCC-CceEEEEEeCCCeEEEEECCCc---chhheecCC-CCC
Confidence 87 8999999999863 333332 344455555543321 2446777889999999999988 788888776 689
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeec--------------------------------------------
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRW-------------------------------------------- 278 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~-------------------------------------------- 278 (369)
|++++|+|++ .|++|+.||+|++||+++++....+
T Consensus 746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 9999999999 9999999999999999876543322
Q ss_pred -----------cccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCC
Q 017601 279 -----------VHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDS 346 (369)
Q Consensus 279 -----------~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~d 346 (369)
.+| ...|.+++|+| ++.++++++.|+.|++||+.++..+..+.+|..+ ..+..++++.+|++++.|
T Consensus 826 ~~~~~~~~~~~~~~-~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGH-HSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp TTTCCEEEEEECSS-SSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ecCCCceeEEcCCC-CCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCC
Confidence 156 78899999999 9999999999999999999999999999999843 244447799999999999
Q ss_pred CcEEEEECCC
Q 017601 347 GSIFVADVVA 356 (369)
Q Consensus 347 g~I~iWd~~~ 356 (369)
|.|++||+.+
T Consensus 904 g~v~vw~~~~ 913 (1249)
T 3sfz_A 904 QTIRVWETKK 913 (1249)
T ss_dssp SCEEEEEHHH
T ss_pred CeEEEEEccc
Confidence 9999999764
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=6e-27 Score=213.46 Aligned_cols=215 Identities=15% Similarity=0.083 Sum_probs=155.3
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC-ceeEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ-WSMAA 165 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~a 165 (369)
.+.+|.+.|++++|+++. ...+|++++.+|.|++||+..+... ....+..| ...+.+++|+|+. ..+++
T Consensus 48 ~l~gH~~~V~~v~~s~~~--~g~~l~s~s~D~~v~iWd~~~~~~~---~~~~~~~h-----~~~v~~v~~~p~~~g~~l~ 117 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPK--FGTILASCSYDGKVMIWKEENGRWS---QIAVHAVH-----SASVNSVQWAPHEYGPMLL 117 (297)
T ss_dssp EECCCSSCEEEEEECCGG--GCSEEEEEETTTEEEEEEBSSSCBC---CCEEECCC-----SSCEEEEEECCGGGCSEEE
T ss_pred EEccccCCeEEEEecCCC--cCCEEEEEcCCCEEEEEEcCCCceE---EEEEeecC-----CCceeEEEeCcCCCCcEEE
Confidence 457899999999998641 1368999999999999999754210 01112222 2346789999963 45778
Q ss_pred EEecccceEEEEeCCcc--eEEEEeeeCCcceeeeccCCCC----------CCCCcEEEEEcCCeEEEEeCCcccCC-ce
Q 017601 166 VARSFSKSIDVYDQDIH--LRTLRTLWYPSSLNFVQNLSPV----------NGGPNMLAVTEGCQLTIWDLRMKENG-GC 232 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~--~~~~~~~~~~~~v~~~~~~~~~----------~~~~~lla~s~d~~v~iwD~~~~~~~-~~ 232 (369)
++ +.|++|++||.... ........|...+..+.+.|.. +++..|++++.|++|+|||++++... ..
T Consensus 118 s~-s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 118 VA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp EE-ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred EE-ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence 77 89999999997532 1112222344445555443321 12457888999999999999876211 14
Q ss_pred eeeeeccCCCcEEEEEECCC---C-cEEEEeCCCcEEEEeCCCce---eeeec--cccccCceEEEEEcCCCCCEEEEEE
Q 017601 233 LHRICGSVGDILYAVCSSST---G-NIAVAGADRTVTIYDPRRWS---ALSRW--VHCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 233 ~~~~~~~~~~~v~~v~~sp~---g-~lasgs~D~~v~vwD~~~~~---~~~~~--~~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
...+.+| ...|++++|+|+ + +||+|+.|++|+|||+++.. ....+ .+| ...|.+++|+| ++++|++++
T Consensus 197 ~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~-~g~~las~~ 273 (297)
T 2pm7_B 197 ESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSL-SGNVLALSG 273 (297)
T ss_dssp EEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC-SSCEEEEEECS-SSCCEEEEE
T ss_pred EEEecCC-CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccC-CCcEEEEEECC-CCCEEEEEc
Confidence 5567666 689999999998 5 89999999999999998742 11233 467 88999999999 999999999
Q ss_pred CCCeEEEEECcC
Q 017601 304 VDYEVFCGQWRE 315 (369)
Q Consensus 304 ~D~~i~vwd~~~ 315 (369)
.|++|++|+...
T Consensus 274 ~D~~v~lw~~~~ 285 (297)
T 2pm7_B 274 GDNKVTLWKENL 285 (297)
T ss_dssp TTSCEEEEEECT
T ss_pred CCCcEEEEEECC
Confidence 999999999864
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.7e-27 Score=222.40 Aligned_cols=204 Identities=11% Similarity=0.058 Sum_probs=147.7
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.+...+++++||||+ ....+|+++.++.|++||+.+.. ..+.+. +. ..+.+++|+|+ ..+++++ +
T Consensus 131 ~~~~~~~~v~fSpDg--~~la~as~~~d~~i~iwd~~~~~-----~~~~~~-~~-----~~V~~v~fspd-g~~l~s~-s 195 (365)
T 4h5i_A 131 NADDYTKLVYISREG--TVAAIASSKVPAIMRIIDPSDLT-----EKFEIE-TR-----GEVKDLHFSTD-GKVVAYI-T 195 (365)
T ss_dssp CTTCCEEEEEECTTS--SCEEEEESCSSCEEEEEETTTTE-----EEEEEE-CS-----SCCCEEEECTT-SSEEEEE-C
T ss_pred CcccCEEEEEEcCCC--CEEEEEECCCCCEEEEeECCCCc-----EEEEeC-CC-----CceEEEEEccC-CceEEec-c
Confidence 455678999999985 34556788889999999987551 122222 21 23568999994 5577777 6
Q ss_pred ccceEEEEeCC-c-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCC----eEEEEeCCcccCC-ceeeeeeccCCC
Q 017601 170 FSKSIDVYDQD-I-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGC----QLTIWDLRMKENG-GCLHRICGSVGD 242 (369)
Q Consensus 170 ~d~~i~lwd~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~----~v~iwD~~~~~~~-~~~~~~~~~~~~ 242 (369)
.++ +.+|+.. . .........+...+..+. ++|++..+++++.|+ ++++||+...... .....+..+ ..
T Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~---fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~ 270 (365)
T 4h5i_A 196 GSS-LEVISTVTGSCIARKTDFDKNWSLSKIN---FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR-FK 270 (365)
T ss_dssp SSC-EEEEETTTCCEEEEECCCCTTEEEEEEE---EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS-CS
T ss_pred cee-EEEEEeccCcceeeeecCCCCCCEEEEE---EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC-CC
Confidence 554 5555543 2 222221222333343333 234677888888776 6888998765210 112345555 68
Q ss_pred cEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeee-ccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 243 ILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSR-WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~-~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
.|++++|+|+| +||+|+.|++|+|||+++++++.+ +.+| ...|++|+||| |+++|+|+|.|++|||||+..
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH-~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH-SFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS-SSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc-cCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 89999999999 999999999999999999999987 4789 99999999999 999999999999999999965
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=245.68 Aligned_cols=251 Identities=12% Similarity=0.071 Sum_probs=186.8
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC-ceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ-WSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~a~ 166 (369)
+.+|.+.|++++|+|++ ..+++++.+|.|++|++..... .....+..| ...+.+++|+|.. +..+++
T Consensus 5 l~gH~~~V~~l~~s~dg----~~latg~~dg~I~vwd~~~~~~---~~~~~l~~h-----~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETH---KLIDTLTGH-----EGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp ---CCCCEEEECCCSSS----CCEEEEETTTEEEEEEEETTEE---EEEEEECCC-----SSCEEEEEECCTTSCSEEEE
T ss_pred cccCcceeEEEEECCCC----CeEEEEECCCcEEEEecCCCCC---ccceeccCC-----cCceEEEEecCCCCCCEEEE
Confidence 56899999999999984 6899999999999999974311 111223333 2346789999852 567888
Q ss_pred EecccceEEEEeCCcce--EEEEeeeCCcceeeeccCCCCCC--CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 167 ARSFSKSIDVYDQDIHL--RTLRTLWYPSSLNFVQNLSPVNG--GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~--~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
+ +.|++|++||..... .......+...+..+.+. |+ +..+++++.|++|++||++++... ....+..+ ..
T Consensus 73 ~-s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~s---p~~~~~~l~sgs~dg~I~vwdl~~~~~~-~~~~~~~~-~~ 146 (753)
T 3jro_A 73 C-SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA---PHEYGPLLLVASSDGKVSVVEFKENGTT-SPIIIDAH-AI 146 (753)
T ss_dssp E-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC---CGGGCSEEEEEETTSEEEEEECCSSSCC-CCEEEECC-SS
T ss_pred E-eCCCeEEEEECCCCcccccccccCCCCCeEEEEEC---CCCCCCEEEEEeCCCcEEEEEeecCCCc-ceeEeecC-CC
Confidence 7 899999999975432 222222355556665543 34 678899999999999999977322 23334444 58
Q ss_pred cEEEEEECC-------------CC-cEEEEeCCCcEEEEeCCCc----eeeeeccccccCceEEEEEcCCC---CCEEEE
Q 017601 243 ILYAVCSSS-------------TG-NIAVAGADRTVTIYDPRRW----SALSRWVHCSKYEITGLSFSSID---SNYIYV 301 (369)
Q Consensus 243 ~v~~v~~sp-------------~g-~lasgs~D~~v~vwD~~~~----~~~~~~~~h~~~~v~~l~~sp~d---~~~l~s 301 (369)
.|++++|+| ++ .|++|+.||+|++||++++ .....+.+| ...|++++|+| + +.+|++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp-~~~~~~~l~s 224 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSP-TVLLRSYLAS 224 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECC-CCSSSEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC-CCcEEEEEecc-CCCCCCEEEE
Confidence 999999999 47 9999999999999999876 566788899 99999999999 8 899999
Q ss_pred EECCCeEEEEECcCCc-----eeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 302 QGVDYEVFCGQWRESS-----KVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 302 ~s~D~~i~vwd~~~~~-----~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++.|++|++||++++. ......+|... ..+...+++.+|++|+.||.|++||+.++.
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 9999999999998853 22222334411 244556799999999999999999998643
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-26 Score=221.24 Aligned_cols=197 Identities=14% Similarity=0.165 Sum_probs=157.7
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCC----cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCC
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQD----IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLR 225 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~ 225 (369)
.+.+++|+|++..+++++ +.|++|+|||.. ...+.+....++..+..+.+ +|++..|++++.|+.+++||+.
T Consensus 104 ~v~~~~~s~d~~~l~~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~---sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACA-DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI---AEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEE-GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEE-CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE---cCCCCEEEEEeCCCcEEEEecC
Confidence 478999999665545777 899999999975 34455544345555555553 3467788889999999999998
Q ss_pred cccCCc-eeeeeeccCCCcEEEEEECCC---C-cEEEEeCCCcEEEEeCCCceeeee-ccccccCceEEEEEcCCCCCEE
Q 017601 226 MKENGG-CLHRICGSVGDILYAVCSSST---G-NIAVAGADRTVTIYDPRRWSALSR-WVHCSKYEITGLSFSSIDSNYI 299 (369)
Q Consensus 226 ~~~~~~-~~~~~~~~~~~~v~~v~~sp~---g-~lasgs~D~~v~vwD~~~~~~~~~-~~~h~~~~v~~l~~sp~d~~~l 299 (369)
++.... ++..+.++ ...|++++|+|+ + +|++|+.|++|++||+++++.+.. +.+| ...|++++|+ ++++|
T Consensus 180 ~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~s--d~~~l 255 (450)
T 2vdu_B 180 SIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH-KHFVSSICCG--KDYLL 255 (450)
T ss_dssp SCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC-SSCEEEEEEC--STTEE
T ss_pred Ccccccccceeeecc-cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC-CCceEEEEEC--CCCEE
Confidence 874322 33356655 589999999999 8 999999999999999999988877 5689 9999999999 89999
Q ss_pred EEEECCCeEEEEECcCCceeEEEEcCC--------------------------CeeeeeEcCCCCEEEEEe-CCCcEEEE
Q 017601 300 YVQGVDYEVFCGQWRESSKVFAFRGDS--------------------------NWLGFSKCSNRDVLGGWS-DSGSIFVA 352 (369)
Q Consensus 300 ~s~s~D~~i~vwd~~~~~~~~~~~g~~--------------------------~~~~~~~~~d~~~l~sgs-~dg~I~iW 352 (369)
++++.|++|++||+++++++..+..+. ....+..++++.+|++++ .|+.|++|
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 999999999999999999888886431 122344466899999999 89999999
Q ss_pred EC
Q 017601 353 DV 354 (369)
Q Consensus 353 d~ 354 (369)
++
T Consensus 336 ~~ 337 (450)
T 2vdu_B 336 EM 337 (450)
T ss_dssp EE
T ss_pred Ee
Confidence 99
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=6.7e-26 Score=216.53 Aligned_cols=248 Identities=11% Similarity=0.088 Sum_probs=187.8
Q ss_pred eeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceE
Q 017601 95 VQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSI 174 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i 174 (369)
++.|+||++ .+||.+- +++|++||..++.. .....+..| ...+++|+|+|+ +.++|++ +.|++|
T Consensus 108 ~~~l~wS~~-----n~lAvgl-d~tV~lWd~~tg~~---~~~~~~~~~-----~~~V~sv~fspd-g~~lasg-s~Dg~v 171 (420)
T 4gga_A 108 LNLVDWSSG-----NVLAVAL-DNSVYLWSASSGDI---LQLLQMEQP-----GEYISSVAWIKE-GNYLAVG-TSSAEV 171 (420)
T ss_dssp CBCEEECTT-----SEEEEEE-TTEEEEEETTTCCE---EEEEECCST-----TCCEEEEEECTT-SSEEEEE-ETTSCE
T ss_pred ceeEEECCC-----CEEEEEe-CCEEEEEECCCCCE---EEEEEecCC-----CCcEEEEEECCC-CCEEEEE-ECCCeE
Confidence 578999975 3666654 78999999986521 111222222 123779999994 5678888 899999
Q ss_pred EEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-
Q 017601 175 DVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG- 253 (369)
Q Consensus 175 ~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g- 253 (369)
+|||............|...+..+.+ ++..+++++.|+.+++||.+... ..+..+.++ ...+..+.|+|++
T Consensus 172 ~iWd~~~~~~~~~~~~h~~~v~~~s~-----~~~~l~sgs~d~~i~~~d~~~~~--~~~~~~~~h-~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHSARVGSLSW-----NSYILSSGSRSGHIHHHDVRVAE--HHVATLSGH-SQEVCGLRWAPDGR 243 (420)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTSSS--CEEEEEECC-SSCEEEEEECTTSS
T ss_pred EEEEcCCCcEEEEEeCCCCceEEEee-----CCCEEEEEeCCCceeEeeecccc--eeeEEeccc-ccceeeeeecCCCC
Confidence 99998643332222334444544442 35678889999999999998763 566677766 6899999999999
Q ss_pred cEEEEeCCCcEEEEeCCCce----eeeeccccccCceEEEEEcCCCCCEEEEE--ECCCeEEEEECcCCceeEEEEcCCC
Q 017601 254 NIAVAGADRTVTIYDPRRWS----ALSRWVHCSKYEITGLSFSSIDSNYIYVQ--GVDYEVFCGQWRESSKVFAFRGDSN 327 (369)
Q Consensus 254 ~lasgs~D~~v~vwD~~~~~----~~~~~~~h~~~~v~~l~~sp~d~~~l~s~--s~D~~i~vwd~~~~~~~~~~~g~~~ 327 (369)
.+++++.|+.|++||.++++ .+.....| ...|.+++|+|.++.+++++ +.|++|++||+.++++...+..|..
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~ 322 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 322 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCSCCSEEECCC-SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC
T ss_pred eeeeeeccccceEEeeccccccceeeeeeccc-CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc
Confidence 99999999999999998764 34567788 89999999999666777764 4799999999999999999988885
Q ss_pred eeeeeEcCCCCEEEEEe--CCCcEEEEECCCCcchhhhcccCC
Q 017601 328 WLGFSKCSNRDVLGGWS--DSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 328 ~~~~~~~~d~~~l~sgs--~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
...+...+++..+++++ .|+.|+|||+.+++ .+..+.||.
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~-~v~~l~gH~ 364 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHT 364 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCS
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCc-EEEEEcCCC
Confidence 55666677888877665 79999999999886 456777775
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=4.8e-27 Score=218.17 Aligned_cols=250 Identities=11% Similarity=0.034 Sum_probs=183.5
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|++++|+|++ .++..+++++.+|.|++|++......+ ...+..| ...+.+++|+| +..+++++
T Consensus 35 ~~~h~~~v~~~~~~~~~-~~g~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~h-----~~~v~~~~~~~-~~~~l~s~ 104 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPT-LPGNFLIAGSWANDVRCWEVQDSGQTI---PKAQQMH-----TGPVLDVCWSD-DGSKVFTA 104 (368)
T ss_dssp SSCCSSCEEEEEECCTT-SSSEEEEEEETTSEEEEEEECTTSCEE---EEEEEEC-----SSCEEEEEECT-TSSEEEEE
T ss_pred ccCCCCceEEEEEcCCC-CCceEEEEECCCCcEEEEEcCCCCcee---EEEeccc-----cCCEEEEEECc-CCCEEEEE
Confidence 56899999999999972 113799999999999999998632211 1122223 23467899999 55577877
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC-------
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV------- 240 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~------- 240 (369)
+.|+.|++||...... .....+...+..+.+.+ ++++..|++++.|++|++||++++ +++..+..+.
T Consensus 105 -~~dg~v~iwd~~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 105 -SCDKTAKMWDLSSNQA-IQIAQHDAPVKTIHWIK-APNYSCVMTGSWDKTLKFWDTRSS---NPMMVLQLPERCYCADV 178 (368)
T ss_dssp -ETTSEEEEEETTTTEE-EEEEECSSCEEEEEEEE-CSSCEEEEEEETTSEEEEECSSCS---SCSEEEECSSCEEEEEE
T ss_pred -cCCCcEEEEEcCCCCc-eeeccccCceEEEEEEe-CCCCCEEEEccCCCcEEEEECCCC---cEEEEEecCCCceEEEe
Confidence 8999999999864322 12333555555544311 245667888999999999999987 5555444330
Q ss_pred ---------------------------------CCcEEEEEECCCC-c----EEEEeCCCcEEEEeCCCc---eeeeecc
Q 017601 241 ---------------------------------GDILYAVCSSSTG-N----IAVAGADRTVTIYDPRRW---SALSRWV 279 (369)
Q Consensus 241 ---------------------------------~~~v~~v~~sp~g-~----lasgs~D~~v~vwD~~~~---~~~~~~~ 279 (369)
...+.++++.++. . +++|+.|+.|++||++.. ..+..+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 1234455554444 3 999999999999999986 5677788
Q ss_pred ccccC------------ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCC
Q 017601 280 HCSKY------------EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDS 346 (369)
Q Consensus 280 ~h~~~------------~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~d 346 (369)
+| .. .|++++|+| ++++|++++.|+.|++||+++++++..+.+|... ..+..++++.+|++++.|
T Consensus 259 ~~-~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 259 CH-RSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp CS-EEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ee-ecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 87 55 799999999 9999999999999999999999999999988732 344447799999999999
Q ss_pred CcEEEEECC
Q 017601 347 GSIFVADVV 355 (369)
Q Consensus 347 g~I~iWd~~ 355 (369)
+..+.|++-
T Consensus 337 ~~~~~~~~~ 345 (368)
T 3mmy_A 337 DWSKGHEFY 345 (368)
T ss_dssp CSTTCGGGC
T ss_pred ccccccccc
Confidence 866555543
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.3e-26 Score=221.89 Aligned_cols=244 Identities=7% Similarity=0.050 Sum_probs=173.4
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCC-----c---c----------ccc----------------c
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDV-----D---R----------LTY----------------S 138 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~-----~---~----------~~~----------------~ 138 (369)
+.|++++|+|++ ....+++++.+|.|++|++....... . + ... .
T Consensus 94 ~~V~~l~~~~~~--~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 94 EKINKIRWLPQK--NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp CCCCEEEECCCC--SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCC--CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence 889999999973 12578888999999999987531100 0 0 000 0
Q ss_pred -ccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEe--------eeCCcceeeeccCCCCCCC-C
Q 017601 139 -VLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRT--------LWYPSSLNFVQNLSPVNGG-P 208 (369)
Q Consensus 139 -~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~-~ 208 (369)
...| ...+.+++|+|+ +.+++++ .|++|++||.......+.. ..+...+..+.+. |++ .
T Consensus 172 ~~~~h-----~~~v~~~~~~~~-~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---p~~~~ 240 (447)
T 3dw8_B 172 FANAH-----TYHINSISINSD-YETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH---PNSCN 240 (447)
T ss_dssp ECSCC-----SSCCCEEEECTT-SSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC---SSCTT
T ss_pred eccCC-----CcceEEEEEcCC-CCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC---CCCCc
Confidence 1112 234668999994 5567776 5999999999743333332 1244445555543 455 6
Q ss_pred cEEEEEcCCeEEEEeCCcccC-CceeeeeeccCCC------------cEEEEEECCCC-cEEEEeCCCcEEEEeCCC-ce
Q 017601 209 NMLAVTEGCQLTIWDLRMKEN-GGCLHRICGSVGD------------ILYAVCSSSTG-NIAVAGADRTVTIYDPRR-WS 273 (369)
Q Consensus 209 ~lla~s~d~~v~iwD~~~~~~-~~~~~~~~~~~~~------------~v~~v~~sp~g-~lasgs~D~~v~vwD~~~-~~ 273 (369)
.|++++.|++|++||+++++. ...+..+..+ .. .|++++|+|+| +|++++. ++|++||+++ ++
T Consensus 241 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 241 TFVYSSSKGTIRLCDMRASALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp EEEEEETTSCEEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS
T ss_pred EEEEEeCCCeEEEEECcCCccccceeeEeccC-CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc
Confidence 888899999999999998731 0115666665 33 89999999999 9999998 9999999998 88
Q ss_pred eeeeccccccCc---------------eEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC------------
Q 017601 274 ALSRWVHCSKYE---------------ITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS------------ 326 (369)
Q Consensus 274 ~~~~~~~h~~~~---------------v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~------------ 326 (369)
++..+.+| ... +..++|+| ++++|++++.|+.|++||+++++.+ .+.+|.
T Consensus 319 ~~~~~~~~-~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~ 395 (447)
T 3dw8_B 319 PVETYQVH-EYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPR 395 (447)
T ss_dssp CSCCEESC-GGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCC
T ss_pred ccceeecc-ccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCc
Confidence 89999888 532 33499999 9999999999999999999987765 333331
Q ss_pred ----------------------CeeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 327 ----------------------NWLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 327 ----------------------~~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
....+...|++.+||+++.++ +++|..+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 396 KVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 112344567999999998876 7888654
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=1.4e-26 Score=249.15 Aligned_cols=292 Identities=13% Similarity=0.097 Sum_probs=206.7
Q ss_pred CCeEEEEEEeCCchhh-hcCCCccccccCcccccccccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCC
Q 017601 50 GCHLYKLQVMMDDWFV-SEGKDSLLIPEQTPVMDSSMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTS 128 (369)
Q Consensus 50 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~ 128 (369)
...|+.+++...+..+ ..+.++....++..... ....+.+|.+.|.+++|+|++ ..+++++.+|.|++||+.++
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~-~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGE-KLLDIKAHEDEVLCCAFSSDD----SYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTC
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-EEEEeccCCCCEEEEEEecCC----CEEEEEeCCCeEEEEECCCC
Confidence 3445566666666555 33445544443433332 233456899999999999984 68999999999999999865
Q ss_pred CCCCccccccccCCCCCCCCCCeeEEEECCCCce-eEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCC
Q 017601 129 GKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS-MAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG 207 (369)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~-~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 207 (369)
. ....+..|. ..+.+++|+|.+.. +++++ +.|+.|++||............|...+..+.+ +|++
T Consensus 690 ~-----~~~~~~~~~-----~~v~~~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~---sp~~ 755 (1249)
T 3sfz_A 690 K-----LVHTYDEHS-----EQVNCCHFTNKSNHLLLATG-SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRF---SPDD 755 (1249)
T ss_dssp C-----EEEEEECCS-----SCEEEEEECSSSSCCEEEEE-ETTSCEEEEETTSSSEEEEECCCSSCEEEEEE---CSST
T ss_pred c-----eEEEEcCCC-----CcEEEEEEecCCCceEEEEE-eCCCeEEEEECCCcchhheecCCCCCEEEEEE---ecCC
Confidence 2 112223332 34668999996444 45555 89999999998643322222335555555553 3467
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCceeee----------------------------------------------------
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGGCLHR---------------------------------------------------- 235 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~~~~~---------------------------------------------------- 235 (369)
..+++++.|++|++||++++ .....
T Consensus 756 ~~l~s~s~dg~v~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRSA---NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGGT---EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred CEEEEEECCCeEEEEeCCCC---cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 78999999999999999765 22211
Q ss_pred --ee-ccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEE
Q 017601 236 --IC-GSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCG 311 (369)
Q Consensus 236 --~~-~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vw 311 (369)
+. .+ ...|.+++|+|++ .+++|+.|++|++||+.++..+..+.+| ...|++++|+| ++++|++++.|++|++|
T Consensus 833 ~~~~~~~-~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~v~~sp-dg~~l~s~s~dg~v~vw 909 (1249)
T 3sfz_A 833 AEIHTGH-HSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGH-LSWVHGVMFSP-DGSSFLTASDDQTIRVW 909 (1249)
T ss_dssp EEEECSS-SSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCC-SSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred eEEcCCC-CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCC-ccceEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 11 22 4778999999999 9999999999999999999999999999 99999999999 99999999999999999
Q ss_pred ECcCCc-----------------------------eeEEEEc---------CCCeeeeeEcCCCCEEEEEeCCCcEEEEE
Q 017601 312 QWRESS-----------------------------KVFAFRG---------DSNWLGFSKCSNRDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 312 d~~~~~-----------------------------~~~~~~g---------~~~~~~~~~~~d~~~l~sgs~dg~I~iWd 353 (369)
|+.+.. ....+.+ ......+..++++.++++|+.||.|++||
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 910 ETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp EHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEE
T ss_pred EccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 975310 0011111 11112333466999999999999999999
Q ss_pred CCCCcchhhhcccC
Q 017601 354 VVAKENEISALKGL 367 (369)
Q Consensus 354 ~~~~~~~~~~l~g~ 367 (369)
+.+++. ...+.+|
T Consensus 990 ~~~~~~-~~~~~~h 1002 (1249)
T 3sfz_A 990 LPNNRV-FSSGVGH 1002 (1249)
T ss_dssp TTTTSC-EEECCCC
T ss_pred cCCCce-eeecccC
Confidence 988753 3334444
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=3.8e-26 Score=219.61 Aligned_cols=235 Identities=14% Similarity=0.158 Sum_probs=185.9
Q ss_pred cCCcccee-eEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 88 RCPHRSEV-QSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V-~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
+.+|.+.| .++.+ ++ ..+++++.+|.|++||+.++. ....+..|. +.+.+++|++ ..+++
T Consensus 114 l~~h~~~v~~~~~~--~g----~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h~-----~~v~~~~~~~---~~l~s 174 (445)
T 2ovr_B 114 LKGHDDHVITCLQF--CG----NRIVSGSDDNTLKVWSAVTGK-----CLRTLVGHT-----GGVWSSQMRD---NIIIS 174 (445)
T ss_dssp EECSTTSCEEEEEE--ET----TEEEEEETTSCEEEEETTTCC-----EEEECCCCS-----SCEEEEEEET---TEEEE
T ss_pred ecccCCCcEEEEEE--cC----CEEEEEECCCcEEEEECCCCc-----EEEEEcCCC-----CCEEEEEecC---CEEEE
Confidence 56888875 55555 42 589999999999999997552 122233332 3466899974 47787
Q ss_pred EecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+ +.|++|++||............+...+..+.+ ++..+++++.|++|++||++++ +++..+..+ ...|++
T Consensus 175 ~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~s~s~dg~i~~wd~~~~---~~~~~~~~~-~~~v~~ 244 (445)
T 2ovr_B 175 G-STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-----HEKRVVSGSRDATLRVWDIETG---QCLHVLMGH-VAAVRC 244 (445)
T ss_dssp E-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEESSSC---CEEEEEECC-SSCEEE
T ss_pred E-eCCCeEEEEECCcCcEEEEECCCCCcEEEEEe-----cCCEEEEEeCCCEEEEEECCCC---cEEEEEcCC-cccEEE
Confidence 7 89999999998643322222234445555543 2468999999999999999988 788888766 689999
Q ss_pred EEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 247 VCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 247 v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
++| ++ .+++|+.|++|++||+++++++.++.+| ...|.++.| ++.++++++.|+.|++||+++++++..+.+|
T Consensus 245 ~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 245 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp EEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCC-SSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCC-CCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 999 67 9999999999999999999999999999 999999999 5689999999999999999999999999988
Q ss_pred CCeeeeeE-cCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 326 SNWLGFSK-CSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 326 ~~~~~~~~-~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.. .+.. ..++.+|++|+.||.|++||+++++.
T Consensus 319 ~~--~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 319 QS--LTSGMELKDNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp CS--CEEEEEEETTEEEEEETTSCEEEEETTTCCE
T ss_pred cc--cEEEEEEeCCEEEEEeCCCeEEEEECCCCcE
Confidence 73 2222 23788999999999999999988763
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=3.1e-26 Score=227.84 Aligned_cols=246 Identities=15% Similarity=0.153 Sum_probs=190.9
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCC-eeEEEECC--CCceeEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGS-WSGLCFSP--SQWSMAA 165 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~p--~~~~~~a 165 (369)
..|++.|.+++|+|++ .++++++ ++.+.+|++.++.... .....+..|. .. +.+++|+| ++ .+++
T Consensus 15 ~~~~~~v~~~~~spdg----~~l~~~~-~~~v~v~~~~~~~~~~-~~~~~~~~h~-----~~~v~~~~~sp~~~~-~~l~ 82 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTT----NAIAYPC-GKSAFVRCLDDGDSKV-PPVVQFTGHG-----SSVVTTVKFSPIKGS-QYLC 82 (615)
T ss_dssp CCCTTCCCCCEEETTT----TEEEEEE-TTEEEEEECCSSCCSS-CSEEEECTTT-----TSCEEEEEECSSTTC-CEEE
T ss_pred CCccCceeEEEECCCC----CEEEEec-CCeEEEEECCCCCCcc-ccceEEecCC-----CceEEEEEECcCCCC-CEEE
Confidence 4689999999999984 5666666 6899999998542111 1122233332 34 67899999 54 4777
Q ss_pred EEecccceEEEEeCCcc-------eEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcC----CeEEEEeCCcccCCcee
Q 017601 166 VARSFSKSIDVYDQDIH-------LRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEG----CQLTIWDLRMKENGGCL 233 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d----~~v~iwD~~~~~~~~~~ 233 (369)
++ +.|++|++||.... ....... .+...+..+.+ ++++..+++++.+ +.|.+|| ++ +.+
T Consensus 83 s~-~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~~~~~~~~v~~~d--~~---~~~ 153 (615)
T 1pgu_A 83 SG-DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW---DFEGRRLCVVGEGRDNFGVFISWD--SG---NSL 153 (615)
T ss_dssp EE-ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEECCSSCSEEEEETT--TC---CEE
T ss_pred Ee-cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEE---eCCCCEEEEeccCCCCccEEEEEE--CC---Ccc
Confidence 77 88999999998421 1222222 24455555553 3567788888877 6899998 34 567
Q ss_pred eeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeeccccccC---ceEEEEEcCCC-CCEEEEEECCCe
Q 017601 234 HRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSKY---EITGLSFSSID-SNYIYVQGVDYE 307 (369)
Q Consensus 234 ~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~---~v~~l~~sp~d-~~~l~s~s~D~~ 307 (369)
..+..+ ...|++++|+|++ .+++++.|++|++||+++++.+..+.+| .. .|++++|+| + +++|++++.|+.
T Consensus 154 ~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 154 GEVSGH-SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSP-DSGEFVITVGSDRK 230 (615)
T ss_dssp EECCSC-SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECS-TTCCEEEEEETTCC
T ss_pred eeeecC-CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECC-CCCCEEEEEeCCCe
Confidence 777766 6899999999999 7999999999999999999999999999 88 999999999 8 999999999999
Q ss_pred EEEEECcCCceeEEE-E---cCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 308 VFCGQWRESSKVFAF-R---GDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 308 i~vwd~~~~~~~~~~-~---g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
|++||+++++.+..+ . +|.. ...+... ++.+|++++.||.|++||+++++.
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 999999999999988 5 6762 2234446 899999999999999999988753
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.5e-26 Score=219.50 Aligned_cols=251 Identities=14% Similarity=0.103 Sum_probs=185.0
Q ss_pred cCCccceeeEEEEee-cCCCCceEEEEEecCCcEEEEEecCCCCCC--ccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 88 RCPHRSEVQSIALAE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDV--DRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
+.+|.+.|.+++|+| + ..++++++.+|.|++|++....... ......+..|. ..+.+++|+|++..++
T Consensus 77 ~~~h~~~V~~~~~~p~~----~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~l 147 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHN----DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-----KRVGIVAWHPTAQNVL 147 (402)
T ss_dssp BCCCSSCEEEEEECTTC----TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-----SCEEEEEECSSBTTEE
T ss_pred EecCCCCEEEEEeCCCC----CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-----CeEEEEEECcCCCCEE
Confidence 568999999999999 5 3699999999999999998652110 01112222232 3467899999765688
Q ss_pred EEEecccceEEEEeCCcceEEEEe--eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee-eccCC
Q 017601 165 AVARSFSKSIDVYDQDIHLRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI-CGSVG 241 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~-~~~~~ 241 (369)
+++ +.|++|++||.......... ..+...+..+.+. +++..|++++.|++|++||++++ +.+..+ ..+..
T Consensus 148 ~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~ 220 (402)
T 2aq5_A 148 LSA-GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS---RDGALICTSCRDKRVRVIEPRKG---TVVAEKDRPHEG 220 (402)
T ss_dssp EEE-ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC---TTSSCEEEEETTSEEEEEETTTT---EEEEEEECSSCS
T ss_pred EEE-cCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC---CCCCEEEEEecCCcEEEEeCCCC---ceeeeeccCCCC
Confidence 888 89999999998644322222 2355556555543 46778999999999999999988 777777 45423
Q ss_pred CcEEEEEECCCC-cEEEE---eCCCcEEEEeCCCcee-eeecc-ccccCceEEEEEcCCCCCEEEE-EECCCeEEEEECc
Q 017601 242 DILYAVCSSSTG-NIAVA---GADRTVTIYDPRRWSA-LSRWV-HCSKYEITGLSFSSIDSNYIYV-QGVDYEVFCGQWR 314 (369)
Q Consensus 242 ~~v~~v~~sp~g-~lasg---s~D~~v~vwD~~~~~~-~~~~~-~h~~~~v~~l~~sp~d~~~l~s-~s~D~~i~vwd~~ 314 (369)
..+.+++|+|++ +|++| +.|+.|++||+++++. +.... .| ...+.+++|+| ++++|++ ++.|+.|++||+.
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~-~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT-SSGVLLPFFDP-DTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC-CSSCEEEEEET-TTTEEEEEETTCSCEEEEEEC
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC-CCceeEEEEcC-CCCEEEEEEcCCCeEEEEEec
Confidence 348999999999 88898 7999999999998654 33333 45 67899999999 9999875 4579999999999
Q ss_pred CCce-eEEEEcC---CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 315 ESSK-VFAFRGD---SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 315 ~~~~-~~~~~g~---~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+++. +..+..| ....++...+++.++++ .++.+++|++.+++
T Consensus 299 ~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 299 SEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp SSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred CCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 8763 4444332 22345556778887764 57799999998764
No 102
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=4e-26 Score=208.63 Aligned_cols=183 Identities=10% Similarity=-0.006 Sum_probs=132.1
Q ss_pred eeEEEE-ecccceEEEEeCC---cceEEEEeeeCC-cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee
Q 017601 162 SMAAVA-RSFSKSIDVYDQD---IHLRTLRTLWYP-SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 162 ~~~a~~-~s~d~~i~lwd~~---~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~ 236 (369)
.++.++ .+.|+.|++|+.. +.+..+...... ..+.|.. ...++..|++++.|++|+|||++++ ++++++
T Consensus 146 ~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~---~~g~~~~LaSgS~D~TIkIWDl~TG---k~l~tL 219 (356)
T 2w18_A 146 RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE---VQGMQEALLGTTIMNNIVIWNLKTG---QLLKKM 219 (356)
T ss_dssp EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE---EETSTTEEEEEETTSEEEEEETTTC---CEEEEE
T ss_pred cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec---cCCCCceEEEecCCCcEEEEECCCC---cEEEEE
Confidence 344442 2469999999973 333333332222 2223332 1124568888999999999999999 899998
Q ss_pred eccC--CCcEEEEEECCCC-cE------------EEEeCCCcEEEEeCCCceeeeec-----cccccCceEEEEEcCCCC
Q 017601 237 CGSV--GDILYAVCSSSTG-NI------------AVAGADRTVTIYDPRRWSALSRW-----VHCSKYEITGLSFSSIDS 296 (369)
Q Consensus 237 ~~~~--~~~v~~v~~sp~g-~l------------asgs~D~~v~vwD~~~~~~~~~~-----~~h~~~~v~~l~~sp~d~ 296 (369)
.++. ...+.+++|+|+| ++ ++|+.|++|++||..+++.+..+ .+| ...+.+..+ ++
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh-~~~~lsg~~---sg 295 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ-AGRFLEGDV---KD 295 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTC-CCCEEEEEE---ET
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCC-cceeEcccc---CC
Confidence 7431 2467788999999 54 67899999999999999887765 477 666554444 46
Q ss_pred CEEEEEECCCeEEEEECcCCceeEEEEcCCCe-e-eeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 297 NYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-L-GFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 297 ~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~-~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
.++++++.|++|+|||+.+++++.++.+|... . .+..+|||++|+||+.|++|+|||+
T Consensus 296 ~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 296 HCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 89999999999999999999999999988631 2 2456789999999999999999996
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.5e-25 Score=209.57 Aligned_cols=238 Identities=10% Similarity=0.014 Sum_probs=166.3
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
...+|.+.|++++|+||+ .++|+++.+| +++|++.+... .+... . .++..+++.+....++++
T Consensus 14 ~~~~h~~~V~~v~fs~dg----~~la~g~~~~-~~iw~~~~~~~-----~~~~~--~-----~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQ----SCLILSTLKS-FEIYNVHPVAH-----IMSQE--M-----RHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----CCCCCEEEECTTS----SEEEEECSSE-EEEEEETTEEE-----EEEEE--C-----SCCCEEEECTTSSEEEEE
T ss_pred ccccCCCceEEEEECCCC----CEEEEEcCCE-EEEEecCCcce-----eeeee--c-----CCeEEEEEcCCCCEEEEE
Confidence 346899999999999984 6888887775 78999874311 11111 0 123468888855544444
Q ss_pred EecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+ +.|++|+|||....... ....+...+..+.. ++ ..++++.|++|++||++++. +.+..+.. +...
T Consensus 77 ~-~~d~~v~iWd~~~~~~~-~~~~~~~~v~~v~~---~~---~~~~~~~~~~i~i~d~~~~~--~~~~~~~~----~~~~ 142 (355)
T 3vu4_A 77 T-GVKEVVHIWDDVKKQDV-SRIKVDAPVKDLFL---SR---EFIVVSYGDVISVFKFGNPW--KRITDDIR----FGGV 142 (355)
T ss_dssp C-SSTTEEEEEETTTTEEE-EEEECSSCEEEEEE---CS---SEEEEEETTEEEEEESSTTC--CBSSCCEE----EEEE
T ss_pred E-CCccEEEEEECCCCcEE-EEEECCCceEEEEE---cC---CEEEEEEcCEEEEEECCCCc--eeeEEecc----CCce
Confidence 5 88899999998533221 12234445555443 12 23444568899999998762 23333332 3344
Q ss_pred EEECCCCcEEE--EeCCCcEEEEeCCCce---------------e-eeeccccccCceEEEEEcCCCCCEEEEEECCCe-
Q 017601 247 VCSSSTGNIAV--AGADRTVTIYDPRRWS---------------A-LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYE- 307 (369)
Q Consensus 247 v~~sp~g~las--gs~D~~v~vwD~~~~~---------------~-~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~- 307 (369)
+++++ ..++. |+.||+|++||+++++ + +..+.+| ...|++++|+| ++++|++++.|++
T Consensus 143 ~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~~s~-~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 143 CEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVRLNR-KSDMVATCSQDGTI 219 (355)
T ss_dssp EEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCC-SSCEEEEEECT-TSSEEEEEETTCSE
T ss_pred EEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEEECC-CCCEEEEEeCCCCE
Confidence 56777 63333 7899999999999865 2 7788999 99999999999 9999999999998
Q ss_pred EEEEECcCCceeEEEE-c-CCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 308 VFCGQWRESSKVFAFR-G-DSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 308 i~vwd~~~~~~~~~~~-g-~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|++||+++++++..+. | |.. ...+..++++.+|++++.|++|++||++++.
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999998 6 762 2344557799999999999999999998653
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=1.1e-26 Score=213.62 Aligned_cols=215 Identities=15% Similarity=0.063 Sum_probs=153.1
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC-ceeEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ-WSMAA 165 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~a 165 (369)
.+.+|.+.|++++|+++. ...+|++++.+++|++||+.++.. .....+..|.. .+.+++|+|+. ..+++
T Consensus 52 ~l~gH~~~V~~v~~~~~~--~~~~l~s~s~D~~v~iWd~~~~~~---~~~~~~~~h~~-----~V~~v~~~p~~~g~~la 121 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPM--YGNILASCSYDRKVIIWREENGTW---EKSHEHAGHDS-----SVNSVCWAPHDYGLILA 121 (316)
T ss_dssp EEECCSSCEEEEEECCGG--GSSCEEEEETTSCEEEECCSSSCC---CEEEEECCCSS-----CCCEEEECCTTTCSCEE
T ss_pred EEcCCCccEEEEEeCCCC--CCCEEEEEECCCEEEEEECCCCcc---eEEEEccCCCC-----ceEEEEECCCCCCcEEE
Confidence 356899999999998631 136899999999999999875411 11122233332 35589999964 45778
Q ss_pred EEecccceEEEEeCCcc--eEEEEee-eCCcceeeeccCCCC--------------CCCCcEEEEEcCCeEEEEeCCccc
Q 017601 166 VARSFSKSIDVYDQDIH--LRTLRTL-WYPSSLNFVQNLSPV--------------NGGPNMLAVTEGCQLTIWDLRMKE 228 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~--~~~~~~~-~~~~~v~~~~~~~~~--------------~~~~~lla~s~d~~v~iwD~~~~~ 228 (369)
++ +.|++|++||.... ....... .|...+..+.+.|.. +++..|++++.|++|+|||++...
T Consensus 122 sg-s~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~ 200 (316)
T 3bg1_A 122 CG-SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG 200 (316)
T ss_dssp EE-CSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS
T ss_pred EE-cCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC
Confidence 77 99999999997532 1111111 122223233222211 113578889999999999997542
Q ss_pred CCceeeeeeccCCCcEEEEEECCCC-----cEEEEeCCCcEEEEeCCCc---e-eeeeccccccCceEEEEEcCCCCCEE
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTG-----NIAVAGADRTVTIYDPRRW---S-ALSRWVHCSKYEITGLSFSSIDSNYI 299 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g-----~lasgs~D~~v~vwD~~~~---~-~~~~~~~h~~~~v~~l~~sp~d~~~l 299 (369)
...++..+.+| ...|++++|+|++ +||+|+.|++|++||+++. + ....+.+| ...|.+++|+| ++++|
T Consensus 201 ~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp-~g~~l 277 (316)
T 3bg1_A 201 QWKEEQKLEAH-SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF-NDVVWHVSWSI-TANIL 277 (316)
T ss_dssp CEEEEECCBCC-SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC-SSCEEEEEECT-TTCCE
T ss_pred ccceeeecccC-CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC-CCcEEEEEEcC-CCCEE
Confidence 22355667766 6899999999984 7999999999999998762 1 23345678 89999999999 99999
Q ss_pred EEEECCCeEEEEECcC
Q 017601 300 YVQGVDYEVFCGQWRE 315 (369)
Q Consensus 300 ~s~s~D~~i~vwd~~~ 315 (369)
++++.|++|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999763
No 105
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=7.2e-26 Score=233.10 Aligned_cols=247 Identities=9% Similarity=-0.039 Sum_probs=189.3
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
+.+|.+.|.+++|+|++ ..+++++.+|.|++|++.++. ....+..|. ..+.+++|+|++ ..++++
T Consensus 51 ~~~~~~~v~~~~~s~~~----~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~-----~~v~~~~~s~~~-~~l~~~ 115 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGE-----KVVDFEAHP-----DYIRSIAVHPTK-PYVLSG 115 (814)
T ss_dssp EECCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCC-----EEEEEECCS-----SCEEEEEECSSS-SEEEEE
T ss_pred EecCCCcEEEEEEeCCC----CEEEEEeCCCeEEEEECCCCc-----EEEEEecCC-----CCEEEEEEeCCC-CEEEEE
Confidence 45799999999999983 789999999999999997652 112223232 346789999954 467777
Q ss_pred ecccceEEEEeCCcceEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 168 RSFSKSIDVYDQDIHLRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|++|++||.......... ..+...+..+.+.| .++..+++++.|++|++||++++ .....+..+....+.+
T Consensus 116 -~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~~v~~ 189 (814)
T 3mkq_A 116 -SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP--KDPSTFASGCLDRTVKVWSLGQS---TPNFTLTTGQERGVNY 189 (814)
T ss_dssp -ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET--TEEEEEEEEETTSEEEEEETTCS---SCSEEEECCCTTCCCE
T ss_pred -cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc--CCCCEEEEEeCCCeEEEEECCCC---cceeEEecCCCCCEEE
Confidence 89999999998643222222 22444444444322 14568888999999999999887 5555555442478999
Q ss_pred EEECC--CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 247 VCSSS--TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 247 v~~sp--~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
++|+| ++ .|++|+.|++|++||+++++.+.++.+| ...|++++|+| ++.+|++++.|+.|++||+.+++....+.
T Consensus 190 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-MSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp EEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC-SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 99999 88 9999999999999999999999999999 99999999999 99999999999999999999999999998
Q ss_pred cCCC-eeeeeEcCCCC--EEEEEeCCCcEEEEECCCCc
Q 017601 324 GDSN-WLGFSKCSNRD--VLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 324 g~~~-~~~~~~~~d~~--~l~sgs~dg~I~iWd~~~~~ 358 (369)
.|.. ...+...+++. ++++++ ++.+.+|++....
T Consensus 268 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 268 VGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDE 304 (814)
T ss_dssp CSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCS
T ss_pred cCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCC
Confidence 7752 23344466765 455555 6668889876543
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=6.4e-26 Score=213.74 Aligned_cols=241 Identities=14% Similarity=0.122 Sum_probs=152.0
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCc--eeEEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQW--SMAAV 166 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~--~~~a~ 166 (369)
.+|.+.|.+++|+|++ ..++++++.+|.|++||+..... ...+. + ...+.+++|+|... .++++
T Consensus 96 ~~~~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 96 DVHRYSVETVQWYPHD---TGMFTSSSFDKTLKVWDTNTLQT-----ADVFN-F-----EETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp TCCSSCEEEEEECTTC---TTCEEEEETTSEEEEEETTTTEE-----EEEEE-C-----SSCEEEEEECSSCSSCCEEEE
T ss_pred ccCCCcEEEEEEccCC---CcEEEEEeCCCeEEEeeCCCCcc-----ceecc-C-----CCceeeeEeecCCCCCcEEEE
Confidence 4699999999999953 46888999999999999985411 11111 1 12355788988543 36777
Q ss_pred EecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCc-EEEEEcCCeEEEEeCCcccCCceeeee-------
Q 017601 167 ARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPN-MLAVTEGCQLTIWDLRMKENGGCLHRI------- 236 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~-lla~s~d~~v~iwD~~~~~~~~~~~~~------- 236 (369)
+ +.|+.|++||... ....+. .+...+..+.+. |++.. +++++.|+.|++||++++. .++..+
T Consensus 162 ~-~~~~~v~~~d~~~~~~~~~~~--~~~~~v~~~~~~---~~~~~ll~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~ 233 (408)
T 4a11_B 162 G-TRGPKVQLCDLKSGSCSHILQ--GHRQEILAVSWS---PRYDYILATASADSRVKLWDVRRAS--GCLITLDQHNGKK 233 (408)
T ss_dssp E-ESSSSEEEEESSSSCCCEEEC--CCCSCEEEEEEC---SSCTTEEEEEETTSCEEEEETTCSS--CCSEECCTTTTCS
T ss_pred E-cCCCeEEEEeCCCcceeeeec--CCCCcEEEEEEC---CCCCcEEEEEcCCCcEEEEECCCCC--ccccccccccccc
Confidence 7 8999999999863 333332 244445555533 44554 7788899999999998763 233333
Q ss_pred --------eccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCc-----------------------------------
Q 017601 237 --------CGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRW----------------------------------- 272 (369)
Q Consensus 237 --------~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~----------------------------------- 272 (369)
..+ ...|++++|+|++ +|++++.|+.|++||++++
T Consensus 234 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 234 SQAVESANTAH-NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp CCCTTTSSCSC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred ceeeccccccc-cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec
Confidence 233 5789999999999 9999999999999998764
Q ss_pred ------------eeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEc-CCCCE
Q 017601 273 ------------SALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKC-SNRDV 339 (369)
Q Consensus 273 ------------~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~-~d~~~ 339 (369)
+++..+.+| ...|++++|+| ++++|++++.|+.|++||+++.+.+.....+. ...... .+...
T Consensus 313 ~~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 388 (408)
T 4a11_B 313 GSTIAVYTVYSGEQITMLKGH-YKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDDDETT--TKSQLNPAFEDA 388 (408)
T ss_dssp TTEEEEEETTTCCEEEEECCC-SSCEEEEEEET-TTTEEEEEETTSCEEEEEECC-------------------------
T ss_pred CCEEEEEECcCCcceeeeccC-CCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCCCceE--ecccccccccee
Confidence 345566788 89999999999 99999999999999999999987776654433 111111 24556
Q ss_pred EEEEeCCCcEEEEECCC
Q 017601 340 LGGWSDSGSIFVADVVA 356 (369)
Q Consensus 340 l~sgs~dg~I~iWd~~~ 356 (369)
+.+.+.|+.+++|+...
T Consensus 389 ~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 389 WSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------
T ss_pred ecccCccCceeecCCcc
Confidence 77888899999998754
No 107
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=2.3e-24 Score=196.54 Aligned_cols=248 Identities=11% Similarity=0.086 Sum_probs=178.4
Q ss_pred eeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceE
Q 017601 95 VQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSI 174 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i 174 (369)
.+.|+||+++ +||++ .+++|++||+.++.. ........| ...+.+++|+|+ +.+++++ +.|++|
T Consensus 28 ~~~l~WS~~~-----~lAvg-~D~tV~iWd~~tg~~---~~~~~~~~~-----~~~V~~v~~~~~-~~~l~sg-s~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN-----VLAVA-LDNSVYLWSASSGDI---LQLLQMEQP-----GEYISSVAWIKE-GNYLAVG-TSSAEV 91 (318)
T ss_dssp CBCEEECTTS-----EEEEE-ETTEEEEEETTTCCE---EEEEECCST-----TCCEEEEEECTT-SSEEEEE-ETTSEE
T ss_pred ceEEEECCCC-----EEEEE-eCCEEEEEECCCCCE---EEEEEecCC-----CCeEEEEEECCC-CCEEEEE-ECCCcE
Confidence 4789999862 66655 478999999986521 111122222 223678999994 5578888 899999
Q ss_pred EEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-
Q 017601 175 DVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG- 253 (369)
Q Consensus 175 ~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g- 253 (369)
++||............|...+.... .++..+++++.++.+++|+..... ..+..+.++ ...+.+++|++++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~-----~~~~~l~s~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLS-----WNSYILSSGSRSGHIHHHDVRVAE--HHVATLSGH-SQEVCGLRWAPDGR 163 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEE-----EETTEEEEEETTSEEEEEETTSSS--CEEEEEECC-SSCEEEEEECTTSS
T ss_pred EEeecCCceeEEEecCccceEEEee-----cCCCEEEEEecCCceEeeecCCCc--eeEEEEcCc-cCceEEEEEcCCCC
Confidence 9999864332222223444444433 234578888999999999998763 455666665 6889999999999
Q ss_pred cEEEEeCCCcEEEEeCCCcee----eeeccccccCceEEEEEcCCCCCEE--EEEECCCeEEEEECcCCceeEEEEcCCC
Q 017601 254 NIAVAGADRTVTIYDPRRWSA----LSRWVHCSKYEITGLSFSSIDSNYI--YVQGVDYEVFCGQWRESSKVFAFRGDSN 327 (369)
Q Consensus 254 ~lasgs~D~~v~vwD~~~~~~----~~~~~~h~~~~v~~l~~sp~d~~~l--~s~s~D~~i~vwd~~~~~~~~~~~g~~~ 327 (369)
+|++++.|++|++||+++++. ......| ...|.++.++|.++..+ ++++.|++|++||.+..........+..
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~ 242 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 242 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCC-CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC
T ss_pred EEEEEecCcceeEEECCCCcccccceeeeccc-CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee
Confidence 999999999999999998654 3345566 78899999999445544 4567789999999999888777766654
Q ss_pred eeeeeEcCCCCEEEEE--eCCCcEEEEECCCCcchhhhcccCC
Q 017601 328 WLGFSKCSNRDVLGGW--SDSGSIFVADVVAKENEISALKGLV 368 (369)
Q Consensus 328 ~~~~~~~~d~~~l~sg--s~dg~I~iWd~~~~~~~~~~l~g~~ 368 (369)
.......+++..++++ +.|+.|++||+++++ .+..++||.
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-~~~~l~gH~ 284 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHT 284 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCS
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCc-EEEEEcCCC
Confidence 4444556677766654 489999999999886 456777774
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-25 Score=217.28 Aligned_cols=247 Identities=12% Similarity=-0.044 Sum_probs=173.8
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCcccc---cc-------------cc---C--CCCCC
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLT---YS-------------VL---P--QDCGV 146 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~---~~-------------~~---~--~~~~~ 146 (369)
+..-...|.+|+|+||+ .++|+++.+++|+ |.... ..+.++. +. +. . .....
T Consensus 11 ~~~~~~~v~sv~~SpDG----~~iASas~D~TV~--d~~~~-~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDG----TLYLTTFPDISIG--QPKYA-KDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp SCCCSSSSCCEEECTTS----CEEEECSSSEEEE--EECCC-SCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTS
T ss_pred HhHhhccEEEEEECCCC----CEEEEEcCCceee--ccccc-ceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecC
Confidence 34445778888888873 6888888888776 32221 1111111 00 00 0 00001
Q ss_pred CCCCeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeC---CcceeeeccCCCCCCCCcEEEEEcCCeEEEEe
Q 017601 147 GEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWY---PSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWD 223 (369)
Q Consensus 147 ~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD 223 (369)
.+..+.+++|+| ++..+|++ +.|++|+|||.......+. ... ...+..+. ++||+..|++++.||+|+|||
T Consensus 84 ~~~~V~~vawSP-dG~~LAs~-s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~sva---fSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 84 PVCYPRVCKPSP-IDDWMAVL-SNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFE---WNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp CSCCEEEEEECS-SSSCEEEE-ETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEE---ECSSSSCEEEEETTSEEEEEE
T ss_pred CCCcEEEEEECC-CCCEEEEE-eCCCcEEEEeCCceeeecc-CCCccccccEEEEE---EcCCCCEEEEEcCCCEEEEEE
Confidence 145688999999 56688888 8999999999766444432 111 11344454 456888999999999999999
Q ss_pred CCcccCCc----eeeeee----ccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCcee---eeecc-ccccCceEEEEE
Q 017601 224 LRMKENGG----CLHRIC----GSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSA---LSRWV-HCSKYEITGLSF 291 (369)
Q Consensus 224 ~~~~~~~~----~~~~~~----~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~---~~~~~-~h~~~~v~~l~~ 291 (369)
++++.-.. .+.++. +| ...|++++|+|+| +++++.|++|++||+..+.. ..++. +| ...|.+++|
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh-~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~svaF 234 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGS-KDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNAS-RRKITDLKI 234 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTC-CCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCC-SSCCCCEEE
T ss_pred CCCCccccccceeeeeeecccccc-cccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccc-cCcEEEEEE
Confidence 98862111 256653 33 4799999999999 99999999999999988663 35674 77 899999999
Q ss_pred cCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe-eeeeE--cCCCCEEEEEeCCCcEEEEECC
Q 017601 292 SSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW-LGFSK--CSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 292 sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~-~~~~~--~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
+ ++.||+++ |++|++||+.+++......||... ..+.. .+|+..|+++++||+ ++|...
T Consensus 235 s---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 235 V---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp E---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred E---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8 48999997 799999999987774333377732 23444 668899999999999 999975
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=2e-24 Score=203.41 Aligned_cols=242 Identities=11% Similarity=0.055 Sum_probs=181.0
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
+...+.+++|+|++ ..++++++.++.|++||+.++. ....+..+ ..+.+++|+|++..+++++ +.
T Consensus 30 ~~~~~~~~~~s~dg---~~l~~~~~~d~~i~v~d~~~~~-----~~~~~~~~------~~v~~~~~spdg~~l~~~~-~~ 94 (391)
T 1l0q_A 30 VGSNPMGAVISPDG---TKVYVANAHSNDVSIIDTATNN-----VIATVPAG------SSPQGVAVSPDGKQVYVTN-MA 94 (391)
T ss_dssp CSSSEEEEEECTTS---SEEEEEEGGGTEEEEEETTTTE-----EEEEEECS------SSEEEEEECTTSSEEEEEE-TT
T ss_pred cCCCcceEEECCCC---CEEEEECCCCCeEEEEECCCCe-----EEEEEECC------CCccceEECCCCCEEEEEE-CC
Confidence 34568999999984 3455777789999999987541 11112111 1366899999665444554 78
Q ss_pred cceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcE-EEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEE
Q 017601 171 SKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNM-LAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCS 249 (369)
Q Consensus 171 d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~ 249 (369)
++.|++||....... ........+..+. +++++..+ ++++.|+.|++||++++ +.+..+..+ ..+.+++|
T Consensus 95 ~~~v~v~d~~~~~~~-~~~~~~~~~~~~~---~s~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~--~~~~~~~~ 165 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVA-GTVKTGKSPLGLA---LSPDGKKLYVTNNGDKTVSVINTVTK---AVINTVSVG--RSPKGIAV 165 (391)
T ss_dssp TTEEEEEETTTTEEE-EEEECSSSEEEEE---ECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECC--SSEEEEEE
T ss_pred CCEEEEEECCCCeEE-EEEeCCCCcceEE---ECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEEecC--CCcceEEE
Confidence 899999998643221 1222222333333 23456666 56667999999999988 777777766 77899999
Q ss_pred CCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE---CCCeEEEEECcCCceeEEEEc
Q 017601 250 SSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG---VDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 250 sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s---~D~~i~vwd~~~~~~~~~~~g 324 (369)
+|++ .| ++++.|+.|++||+++++.+..+.. ...+.+++|+| ++++|++++ .|+.|++||+++++.+..+..
T Consensus 166 ~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 166 TPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--EAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec--CCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEec
Confidence 9999 55 6788899999999999988877764 46799999999 999998888 689999999999999999988
Q ss_pred CCCeeeeeEcCCCCEE-EEEeCCCcEEEEECCCCcc
Q 017601 325 DSNWLGFSKCSNRDVL-GGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 325 ~~~~~~~~~~~d~~~l-~sgs~dg~I~iWd~~~~~~ 359 (369)
|.....+...++++.| ++++.|+.|++||+.+++.
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 7754556667788876 6888999999999998753
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.9e-25 Score=230.55 Aligned_cols=241 Identities=10% Similarity=0.046 Sum_probs=179.1
Q ss_pred cccccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCcee
Q 017601 84 SMLNRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSM 163 (369)
Q Consensus 84 ~~~~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 163 (369)
....+.+|.+.|++++|+|++ .+||+++.+|.|++|+.... ...... .+ ...+.+++|+| +. +
T Consensus 9 ~~~~~~gh~~~V~~lafspdg----~~lAsgs~Dg~I~lw~~~~~-----~~~~~~-~~-----~~~V~~l~fsp-g~-~ 71 (902)
T 2oaj_A 9 AETNKYGMSSKPIAAAFDFTQ----NLLAIATVTGEVHIYGQQQV-----EVVIKL-ED-----RSAIKEMRFVK-GI-Y 71 (902)
T ss_dssp EEEEEEECSSCEEEEEEETTT----TEEEEEETTSEEEEECSTTC-----EEEEEC-SS-----CCCEEEEEEET-TT-E
T ss_pred ccccccCCCCCcEEEEECCCC----CEEEEEeCCCEEEEEeCCCc-----EEEEEc-CC-----CCCEEEEEEcC-CC-E
Confidence 334456899999999999984 79999999999999987643 111111 11 23477999999 54 7
Q ss_pred EEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCcee--------
Q 017601 164 AAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCL-------- 233 (369)
Q Consensus 164 ~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~-------- 233 (369)
++++ +.|++|+|||... .+..+ .+...+..+. ++|++..+++++.||+|++||++++ ...
T Consensus 72 L~S~-s~D~~v~lWd~~~~~~~~~~---~~~~~V~~v~---~sp~g~~l~sgs~dg~V~lwd~~~~---~~~~~~i~~~~ 141 (902)
T 2oaj_A 72 LVVI-NAKDTVYVLSLYSQKVLTTV---FVPGKITSID---TDASLDWMLIGLQNGSMIVYDIDRD---QLSSFKLDNLQ 141 (902)
T ss_dssp EEEE-ETTCEEEEEETTTCSEEEEE---ECSSCEEEEE---CCTTCSEEEEEETTSCEEEEETTTT---EEEEEEECCHH
T ss_pred EEEE-ECcCeEEEEECCCCcEEEEE---cCCCCEEEEE---ECCCCCEEEEEcCCCcEEEEECCCC---ccccceecccc
Confidence 8887 8999999999863 33333 3445555555 3456788999999999999999876 332
Q ss_pred ---eeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeecccc-----------------ccCceEEEEE
Q 017601 234 ---HRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHC-----------------SKYEITGLSF 291 (369)
Q Consensus 234 ---~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h-----------------~~~~v~~l~~ 291 (369)
..+.+| ...|++++|+|++ .|++|+.|++| +||+++++++..+.+| +...|++++|
T Consensus 142 ~~~~~~~~h-~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 142 KSSFFPAAR-LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHTCSSSC-CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred ccccccccC-CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 122334 5889999999975 89999999999 9999999888777644 1477999999
Q ss_pred cCCCCCEEEEEECCCeEEEEECcCCceeEE--E---EcC-------------C-CeeeeeEc----CC-CCEEEEEeCC-
Q 017601 292 SSIDSNYIYVQGVDYEVFCGQWRESSKVFA--F---RGD-------------S-NWLGFSKC----SN-RDVLGGWSDS- 346 (369)
Q Consensus 292 sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~--~---~g~-------------~-~~~~~~~~----~d-~~~l~sgs~d- 346 (369)
+| ++++|++++.|++|++||+++++++.. + .+| . ....+..+ ++ +.+|++|+.|
T Consensus 220 sp-dg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 220 HP-NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp CT-TSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred cC-CCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 99 999999999999999999999887654 2 123 2 11223332 23 3578888776
Q ss_pred ----CcEEEEEC
Q 017601 347 ----GSIFVADV 354 (369)
Q Consensus 347 ----g~I~iWd~ 354 (369)
+.+.+|++
T Consensus 299 ~~~~~~v~~~~~ 310 (902)
T 2oaj_A 299 RGDNQSLTMIDL 310 (902)
T ss_dssp TSSCCCEEEEEE
T ss_pred CCCCceEEEEec
Confidence 37899985
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.9e-25 Score=207.70 Aligned_cols=233 Identities=11% Similarity=0.070 Sum_probs=163.2
Q ss_pred eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccce
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKS 173 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~ 173 (369)
.+..+++.++. ..+..+++.++.|++||..++.. ...+. + ...+.+++|+++ .++++ .|+.
T Consensus 60 ~~~~~~~~~~~---~~~~~~~~~d~~v~iWd~~~~~~-----~~~~~-~-----~~~v~~v~~~~~---~~~~~--~~~~ 120 (355)
T 3vu4_A 60 HLSKVRMLHRT---NYVAFVTGVKEVVHIWDDVKKQD-----VSRIK-V-----DAPVKDLFLSRE---FIVVS--YGDV 120 (355)
T ss_dssp CCCEEEECTTS---SEEEEECSSTTEEEEEETTTTEE-----EEEEE-C-----SSCEEEEEECSS---EEEEE--ETTE
T ss_pred CeEEEEEcCCC---CEEEEEECCccEEEEEECCCCcE-----EEEEE-C-----CCceEEEEEcCC---EEEEE--EcCE
Confidence 47778887763 23445666778999999875511 11111 1 123668999873 34444 4789
Q ss_pred EEEEeCCcc---eEEEEeeeCCcceeeeccCCCCCCCCcEEEE--EcCCeEEEEeCCcccCC------------ce-eee
Q 017601 174 IDVYDQDIH---LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAV--TEGCQLTIWDLRMKENG------------GC-LHR 235 (369)
Q Consensus 174 i~lwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~--s~d~~v~iwD~~~~~~~------------~~-~~~ 235 (369)
|++||.... +..+.. +..+..+. + ..++.+ +.||+|++||++++... .+ +..
T Consensus 121 i~i~d~~~~~~~~~~~~~---~~~~~~~s-----~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR---FGGVCEFS-----N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190 (355)
T ss_dssp EEEEESSTTCCBSSCCEE---EEEEEEEE-----T--TEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred EEEEECCCCceeeEEecc---CCceEEEE-----c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence 999998643 233222 22232332 2 355553 57999999999975200 01 566
Q ss_pred eeccCCCcEEEEEECCCC-cEEEEeCCCc-EEEEeCCCceeeeecc-c-cccCceEEEEEcCCCCCEEEEEECCCeEEEE
Q 017601 236 ICGSVGDILYAVCSSSTG-NIAVAGADRT-VTIYDPRRWSALSRWV-H-CSKYEITGLSFSSIDSNYIYVQGVDYEVFCG 311 (369)
Q Consensus 236 ~~~~~~~~v~~v~~sp~g-~lasgs~D~~-v~vwD~~~~~~~~~~~-~-h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vw 311 (369)
+.+| ...|++++|+|+| +||+|+.|++ |+|||+++++++.++. + | ...|++++|+| ++++|++++.|++|++|
T Consensus 191 ~~~h-~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h-~~~v~~~~~s~-~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 191 IKAH-TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD-RADVVDMKWST-DGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp ECCC-SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC-CSCEEEEEECT-TSCEEEEEETTCEEEEE
T ss_pred EEcc-CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-CCcEEEEEECC-CCCEEEEEECCCEEEEE
Confidence 7766 7899999999999 9999999999 9999999999999998 6 8 99999999999 99999999999999999
Q ss_pred ECcCCce--eEEEEc----------------------CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 312 QWRESSK--VFAFRG----------------------DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 312 d~~~~~~--~~~~~g----------------------~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|++.+.. ...+.+ +.....+..++|+..|++++.||.+++|++..++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 9976421 111100 0000123345689999999999999999987654
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.3e-25 Score=203.75 Aligned_cols=216 Identities=15% Similarity=0.088 Sum_probs=160.1
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC-ceeEE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ-WSMAA 165 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~a 165 (369)
.+.+|.+.|++++|+++. ....+++++.+|.|++||+..... ........| ...+.+++|+|+. ...++
T Consensus 50 ~~~~h~~~v~~~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~ 119 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPK--FGTILASCSYDGKVLIWKEENGRW---SQIAVHAVH-----SASVNSVQWAPHEYGPLLL 119 (379)
T ss_dssp EECCCSSCEEEEEECCGG--GCSEEEEEETTSCEEEEEEETTEE---EEEEEECCC-----SSCEEEEEECCGGGCSEEE
T ss_pred EecCCCCcEEEEEeCCCC--CCCEEEEeccCCEEEEEEcCCCce---eEeeeecCC-----CcceEEEEeCCCCCCCEEE
Confidence 356899999999998762 136899999999999999986410 011122222 2346789999963 45777
Q ss_pred EEecccceEEEEeCCcc--eEEEEeeeCCcceeeeccCCC----------CCCCCcEEEEEcCCeEEEEeCCcccCC-ce
Q 017601 166 VARSFSKSIDVYDQDIH--LRTLRTLWYPSSLNFVQNLSP----------VNGGPNMLAVTEGCQLTIWDLRMKENG-GC 232 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~--~~~~~~~~~~~~v~~~~~~~~----------~~~~~~lla~s~d~~v~iwD~~~~~~~-~~ 232 (369)
++ +.|+.|++||.... ........+...+..+.+.+. .+++..+++++.|+.|++||++++... ..
T Consensus 120 ~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 198 (379)
T 3jrp_A 120 VA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 198 (379)
T ss_dssp EE-ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred Ee-cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee
Confidence 77 89999999998633 233333345555555554432 014678889999999999999876321 23
Q ss_pred eeeeeccCCCcEEEEEECCC---C-cEEEEeCCCcEEEEeCCCce-----eeeeccccccCceEEEEEcCCCCCEEEEEE
Q 017601 233 LHRICGSVGDILYAVCSSST---G-NIAVAGADRTVTIYDPRRWS-----ALSRWVHCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 233 ~~~~~~~~~~~v~~v~~sp~---g-~lasgs~D~~v~vwD~~~~~-----~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
+..+..+ ...|++++|+|+ + +|++++.|++|++||++++. .+.....| ...|++++|+| ++++|++++
T Consensus 199 ~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~-~g~~l~~~~ 275 (379)
T 3jrp_A 199 ESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSL-SGNVLALSG 275 (379)
T ss_dssp EEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC-SSCEEEEEECS-SSCCEEEEE
T ss_pred EEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccC-CCcEEEEEEcC-CCCEEEEec
Confidence 4455555 689999999999 8 99999999999999999853 23334457 88999999999 999999999
Q ss_pred CCCeEEEEECcCC
Q 017601 304 VDYEVFCGQWRES 316 (369)
Q Consensus 304 ~D~~i~vwd~~~~ 316 (369)
.|+.|++||+...
T Consensus 276 ~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 276 GDNKVTLWKENLE 288 (379)
T ss_dssp SSSSEEEEEEEET
T ss_pred CCCcEEEEeCCCC
Confidence 9999999999853
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.9e-25 Score=230.59 Aligned_cols=196 Identities=10% Similarity=0.042 Sum_probs=160.5
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccC
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKEN 229 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~ 229 (369)
.+.+++|+|+ ..++|++ +.|++|+|||........ ...+...+..+.+. + +..|++++.|++|+|||++++
T Consensus 19 ~V~~lafspd-g~~lAsg-s~Dg~I~lw~~~~~~~~~-~~~~~~~V~~l~fs---p-g~~L~S~s~D~~v~lWd~~~~-- 89 (902)
T 2oaj_A 19 KPIAAAFDFT-QNLLAIA-TVTGEVHIYGQQQVEVVI-KLEDRSAIKEMRFV---K-GIYLVVINAKDTVYVLSLYSQ-- 89 (902)
T ss_dssp CEEEEEEETT-TTEEEEE-ETTSEEEEECSTTCEEEE-ECSSCCCEEEEEEE---T-TTEEEEEETTCEEEEEETTTC--
T ss_pred CcEEEEECCC-CCEEEEE-eCCCEEEEEeCCCcEEEE-EcCCCCCEEEEEEc---C-CCEEEEEECcCeEEEEECCCC--
Confidence 3678999995 5688888 899999999986433222 23344455555543 3 457999999999999999988
Q ss_pred CceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceee-----------eeccccccCceEEEEEcCCCCC
Q 017601 230 GGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSAL-----------SRWVHCSKYEITGLSFSSIDSN 297 (369)
Q Consensus 230 ~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~-----------~~~~~h~~~~v~~l~~sp~d~~ 297 (369)
+++..+.++ ..|++++|+|++ +|++|+.||+|++||+++++.. ..+.+| ...|++++|+|.++.
T Consensus 90 -~~~~~~~~~--~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h-~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 90 -KVLTTVFVP--GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR-LSPIVSIQWNPRDIG 165 (902)
T ss_dssp -SEEEEEECS--SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC-CCCCCEEEEETTEEE
T ss_pred -cEEEEEcCC--CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC-CCCeEEEEEccCCCC
Confidence 788888766 899999999999 9999999999999999987754 345678 899999999994457
Q ss_pred EEEEEECCCeEEEEECcCCceeEEEEcC-------------------CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 298 YIYVQGVDYEVFCGQWRESSKVFAFRGD-------------------SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 298 ~l~s~s~D~~i~vwd~~~~~~~~~~~g~-------------------~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
.|++++.|++| +||+++++++..+.+| .....+...++|.+|++|+.||+|++||+++++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 89999999999 9999999999988876 223455567899999999999999999998876
Q ss_pred c
Q 017601 359 N 359 (369)
Q Consensus 359 ~ 359 (369)
.
T Consensus 245 ~ 245 (902)
T 2oaj_A 245 M 245 (902)
T ss_dssp E
T ss_pred E
Confidence 4
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.5e-24 Score=199.06 Aligned_cols=223 Identities=13% Similarity=0.043 Sum_probs=160.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccc----cccccCCCCCCCCCCeeEEEECCCC-ce
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRL----TYSVLPQDCGVGEGSWSGLCFSPSQ-WS 162 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~p~~-~~ 162 (369)
+.+|.+.|.+++|+|.. +..++++++.+|.|++||+.......... ...+..| ...+.+++|+|+. ..
T Consensus 53 ~~~~~~~v~~~~~~~~~--d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~ 125 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPE--YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----KGSLYSVKFAPAHLGL 125 (351)
T ss_dssp EECCSSCEEEEEECCGG--GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----SSCEEEEEECCGGGCS
T ss_pred eccCCCcEEEEEEcCCC--CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc-----CCceeEEEEcCCCCCc
Confidence 45899999999999831 13689999999999999998653211110 1112222 2346789999952 55
Q ss_pred eEEEEecccceEEEEeCCc--ceEEEEe-----------eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccC
Q 017601 163 MAAVARSFSKSIDVYDQDI--HLRTLRT-----------LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKEN 229 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~--~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~ 229 (369)
+++++ +.|+.|++||... ....+.. ..+...+..+.+.|...++..+++++.|+.+.+|+...+.
T Consensus 126 ~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~- 203 (351)
T 3f3f_A 126 KLACL-GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK- 203 (351)
T ss_dssp EEEEE-ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-
T ss_pred EEEEe-cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-
Confidence 67777 8999999999742 1111110 0122233344433321235688888999999888877651
Q ss_pred CceeeeeeccCCCcEEEEEECCCC-----cEEEEeCCCcEEEEeCCCc--------------------------------
Q 017601 230 GGCLHRICGSVGDILYAVCSSSTG-----NIAVAGADRTVTIYDPRRW-------------------------------- 272 (369)
Q Consensus 230 ~~~~~~~~~~~~~~v~~v~~sp~g-----~lasgs~D~~v~vwD~~~~-------------------------------- 272 (369)
...+..+..+ ...|++++|+|++ +|++|+.|++|++||++++
T Consensus 204 ~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
T 3f3f_A 204 LHVAAKLPGH-KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDS 282 (351)
T ss_dssp EEEEEECCCC-CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------
T ss_pred eeeeeecCCC-CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccc
Confidence 1235556655 6899999999996 7999999999999999874
Q ss_pred --------------eeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 273 --------------SALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 273 --------------~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
+.+..+.+| ...|++++|+| ++++|++++.|+.|++||+.+++....+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 283 NTEEKAELQSNLQVELLSEHDDH-NGEVWSVSWNL-TGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp --------CCSEEEEEEEEECTT-SSCEEEEEECS-SSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccceeeeecccccccEEEEEecc-cccEEEEEEcC-CCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 667788899 99999999999 9999999999999999999987554444
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=1e-25 Score=213.68 Aligned_cols=250 Identities=8% Similarity=-0.065 Sum_probs=150.3
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECC-------CCc
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSP-------SQW 161 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p-------~~~ 161 (369)
..|.+.+....++++ ..++|+++.+++|++||...+..........+.+| +..+.+++|+| .++
T Consensus 86 ~~~~~~~~~~~~~~~----~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH-----~~~v~~v~~~p~~~~~~~~d~ 156 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVY----SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGH-----HNFVNDIDIADVYSADNRLAE 156 (393)
T ss_dssp C----------CCEE----EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSC-----SSCEEEEEEEEEECTTCSEEE
T ss_pred cccCCCcceeecCCC----CCEEEEEeCCCcEEEEECCCCccceeeeecccCCC-----CCceEEEEEccccccccCCCC
Confidence 345666666666665 47999999999999999986521000000112223 23467899987 245
Q ss_pred eeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCcccCCceee------
Q 017601 162 SMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRMKENGGCLH------ 234 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~~~~~~~~~------ 234 (369)
.+||++ |.|++|+|||+...........+...+..+.+.| ++ ..|++++.|++|++||++++.......
T Consensus 157 ~~las~-s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p---~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 157 QVIASV-GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRP---SNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp EEEEEE-ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEET---TEEEEEEEEETTSEEEEEETTCCC----------CS
T ss_pred CEEEEE-ECCCeEEEEECCCCceeeeecCCCCCcEEEEECC---CCCceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence 688888 9999999999754333333444555554554433 34 367888999999999998763111000
Q ss_pred ----------------eeeccCCCcEEEEEEC-CCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcC---
Q 017601 235 ----------------RICGSVGDILYAVCSS-STG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSS--- 293 (369)
Q Consensus 235 ----------------~~~~~~~~~v~~v~~s-p~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp--- 293 (369)
...++ ...+.+++|+ |++ .|++++.|+++++||++.++....+..| ...+..+.++|
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~-~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGI-ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDS-TMKLGPKNLLPNVQ 310 (393)
T ss_dssp CCCSEEEESGGGC------CC-SSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEE
T ss_pred cceEEecccccceeeeecccc-cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeee-cCccccEEEccccc
Confidence 01122 4678888886 788 9999999999999999988777766666 54444443333
Q ss_pred ----------------CCCCEEEEEECCCeEEEEECcCCceeEEEEcCC-CeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 294 ----------------IDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS-NWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 294 ----------------~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~-~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
.++.++++++.|++|++||+.++++...+.+|. ....+...+||++||+++++| +.+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 133467778899999999999988888777665 233455578999999999877 555554
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=3.5e-24 Score=204.49 Aligned_cols=241 Identities=15% Similarity=0.051 Sum_probs=182.7
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+|.+.|++++|+++ ..++++++.++.|++||+.+.. ....+..+. ..+.+++|+|++..+++++
T Consensus 165 ~~~~~~~v~~~~~~~~----~~~~~s~~~d~~v~~~d~~~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 165 YKKKLGFVETISIPEH----NELWVSQMQANAVHVFDLKTLA-----YKATVDLTG-----KWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp HHTTCCEEEEEEEGGG----TEEEEEEGGGTEEEEEETTTCC-----EEEEEECSS-----SSEEEEEEETTTTEEEEEE
T ss_pred ccccCCceeEEEEcCC----CEEEEEECCCCEEEEEECCCce-----EEEEEcCCC-----CCeeEEEEcCCCCEEEEEe
Confidence 3478999999999887 3788999999999999987541 111222221 2356899999766555555
Q ss_pred ecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE--------cCCeEEEEeCCcccCCceeeeeecc
Q 017601 168 RSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT--------EGCQLTIWDLRMKENGGCLHRICGS 239 (369)
Q Consensus 168 ~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s--------~d~~v~iwD~~~~~~~~~~~~~~~~ 239 (369)
+.|+.|++||...... .........+..+. +++++..+++++ .|+.|++||++++ +.+..+.+.
T Consensus 231 -~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~---~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~---~~~~~~~~~ 302 (433)
T 3bws_A 231 -WISEDISVIDRKTKLE-IRKTDKIGLPRGLL---LSKDGKELYIAQFSASNQESGGGRLGIYSMDKE---KLIDTIGPP 302 (433)
T ss_dssp -TTTTEEEEEETTTTEE-EEECCCCSEEEEEE---ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT---EEEEEEEEE
T ss_pred -cCCCcEEEEECCCCcE-EEEecCCCCceEEE---EcCCCCEEEEEECCCCccccCCCeEEEEECCCC---cEEeeccCC
Confidence 7899999999853321 12222222333333 235566777776 4889999999987 666666555
Q ss_pred CCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEEC-------------
Q 017601 240 VGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGV------------- 304 (369)
Q Consensus 240 ~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~------------- 304 (369)
..+.+++|+|++ .+++++.|+.|++||+++++.+..+. + ...+.+++|+| ++++|++++.
T Consensus 303 --~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~-~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 303 --GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-V-FDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp --ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-C-SSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCC
T ss_pred --CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-C-CCCCCeEEEcC-CCCEEEEEecCCCcccccccccc
Confidence 688999999999 55777999999999999998888776 5 67899999999 9999888876
Q ss_pred --CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeC-CCcEEEEECC
Q 017601 305 --DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSD-SGSIFVADVV 355 (369)
Q Consensus 305 --D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~-dg~I~iWd~~ 355 (369)
|+.|++||+.+++.+..+.++.....+...+++++|++++. |+.|++|++.
T Consensus 378 ~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 378 LVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 57999999999999999887665456666789999887775 9999999985
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.7e-24 Score=207.26 Aligned_cols=246 Identities=11% Similarity=0.039 Sum_probs=176.1
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEec--CCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLD--TSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.+|.+.|++++|+|++ ..++++++.+|.|++|++. .+. . ...+..+. ....+.+++|+|+ +..+++
T Consensus 99 ~~~~~~v~~~~~s~d~---~~l~~~~~~dg~v~iwd~~~~~~~-~----~~~~~~~~---~~~~v~~~~~sp~-~~~l~~ 166 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDE---SRLIACADSDKSLLVFDVDKTSKN-V----LKLRKRFC---FSKRPNAISIAED-DTTVII 166 (450)
T ss_dssp -CCCCCEEEEEECTTS---SEEEEEEGGGTEEEEEEECSSSSS-C----EEEEEEEE---CSSCEEEEEECTT-SSEEEE
T ss_pred CccCCceEEEEEcCCC---CEEEEEECCCCeEEEEECcCCCCc-e----eeeeeccc---CCCCceEEEEcCC-CCEEEE
Confidence 3688899999999984 3445899999999999998 331 1 11111110 1123678999995 457777
Q ss_pred EecccceEEEEeCCcce--E-EE-EeeeCCcceeeeccCCCCCC---CCcEEEEEcCCeEEEEeCCcccCCceeee-eec
Q 017601 167 ARSFSKSIDVYDQDIHL--R-TL-RTLWYPSSLNFVQNLSPVNG---GPNMLAVTEGCQLTIWDLRMKENGGCLHR-ICG 238 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~--~-~~-~~~~~~~~v~~~~~~~~~~~---~~~lla~s~d~~v~iwD~~~~~~~~~~~~-~~~ 238 (369)
+ +.++.|.+|+..... . .. ....+...+..+.+. |+ +..|++++.|++|++||++++ +++.. +.+
T Consensus 167 ~-~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s---p~~~~~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~ 239 (450)
T 2vdu_B 167 A-DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI---KDSDGHQFIITSDRDEHIKISHYPQC---FIVDKWLFG 239 (450)
T ss_dssp E-ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE---ECTTSCEEEEEEETTSCEEEEEESCT---TCEEEECCC
T ss_pred E-eCCCcEEEEecCCcccccccceeeecccCceEEEEEc---CCCCCCcEEEEEcCCCcEEEEECCCC---ceeeeeecC
Confidence 7 789999999874221 1 01 112234444444432 34 558888999999999999987 66666 334
Q ss_pred cCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc------------------------ccCceEEEEEcC
Q 017601 239 SVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC------------------------SKYEITGLSFSS 293 (369)
Q Consensus 239 ~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h------------------------~~~~v~~l~~sp 293 (369)
+ ...|++++|+ ++ +|++|+.|++|++||+++++++..+..+ ....|.+++|+|
T Consensus 240 h-~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 H-KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp C-SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred C-CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 4 5899999999 99 9999999999999999999888777532 035699999999
Q ss_pred CCCCEEEEEE-CCCeEEEEEC--cCC---ceeEEEEcCCCeeeeeEcCCCCEEEEEeC------CCcEEEEECCC
Q 017601 294 IDSNYIYVQG-VDYEVFCGQW--RES---SKVFAFRGDSNWLGFSKCSNRDVLGGWSD------SGSIFVADVVA 356 (369)
Q Consensus 294 ~d~~~l~s~s-~D~~i~vwd~--~~~---~~~~~~~g~~~~~~~~~~~d~~~l~sgs~------dg~I~iWd~~~ 356 (369)
++++|++++ .|+.|++||+ ..+ +.+..+.+|.....+...+++.+++.++. +..|.+|.+..
T Consensus 318 -~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 318 -NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp -SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred -CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 999999999 8999999999 555 67777888765555665665433444443 55688887654
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=9.2e-24 Score=195.95 Aligned_cols=207 Identities=12% Similarity=0.123 Sum_probs=156.2
Q ss_pred CCeeEEEECCCC--ceeEEEEecccceEEEEeCCc-ceEE-EEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeC
Q 017601 149 GSWSGLCFSPSQ--WSMAAVARSFSKSIDVYDQDI-HLRT-LRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDL 224 (369)
Q Consensus 149 ~~~~~l~~~p~~--~~~~a~~~s~d~~i~lwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~ 224 (369)
..+.+++|+|++ +.+++++ +.|+.|++||... .... .....+...+..+.+. +++..|++++.|++|++||+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAG-SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS---DDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEE-ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC---TTSSEEEEEETTSEEEEEET
T ss_pred CceEEEEEcCCCCCceEEEEE-CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC---cCCCEEEEEcCCCcEEEEEc
Confidence 347799999965 5788888 8999999999863 2111 2223355556665543 46778999999999999999
Q ss_pred CcccCCceeeeeeccCCCcEEEEEE--CCCC-cEEEEeCCCcEEEEeCCCceeeeecccccc------------------
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCS--SSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSK------------------ 283 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~--sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~------------------ 283 (369)
+++ +.+....+. ..|++++| +|++ +|++++.|++|++||+++++++..+..| .
T Consensus 116 ~~~---~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 189 (368)
T 3mmy_A 116 SSN---QAIQIAQHD--APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIYPMAVVATAE 189 (368)
T ss_dssp TTT---EEEEEEECS--SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEETTEEEEEEGG
T ss_pred CCC---Cceeecccc--CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecCCeeEEEeCC
Confidence 987 666655554 89999999 9999 9999999999999999998877666544 2
Q ss_pred -----------------------CceEEEEEcCCCCCE----EEEEECCCeEEEEECcCC---ceeEEEEcCCC------
Q 017601 284 -----------------------YEITGLSFSSIDSNY----IYVQGVDYEVFCGQWRES---SKVFAFRGDSN------ 327 (369)
Q Consensus 284 -----------------------~~v~~l~~sp~d~~~----l~s~s~D~~i~vwd~~~~---~~~~~~~g~~~------ 327 (369)
..+..+.+.+ +... +++++.|+.|++||++.. .....+.+|..
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 2334444444 3333 999999999999999986 67788888862
Q ss_pred -------eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcchhhhcccC
Q 017601 328 -------WLGFSKCSNRDVLGGWSDSGSIFVADVVAKENEISALKGL 367 (369)
Q Consensus 328 -------~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~~~~~l~g~ 367 (369)
...+..++++.+|++|+.||.|++||+.+++. +..+.+|
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~ 314 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK-LKTSEQL 314 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-EEECCCC
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE-EEEecCC
Confidence 33455577999999999999999999998753 3445444
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=9.1e-24 Score=202.48 Aligned_cols=210 Identities=14% Similarity=0.094 Sum_probs=161.3
Q ss_pred ccCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCcc--ccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 87 NRCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDR--LTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 87 ~~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
.+.+|.++|.+++|+|++ ..++++++.+|.|.+|++......... .......| ...+.+++|+|.+..++
T Consensus 176 ~~~~h~~~v~~l~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNL---NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH-----TAVVEDVAWHLLHESLF 247 (430)
T ss_dssp EEECCSSCCCCEEECTTS---TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCC-----SSCEEEEEECSSCTTEE
T ss_pred EecCCCCCeEEEEeCCCC---CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCC-----CCCEeeeEEeCCCCCEE
Confidence 356899999999999974 238999999999999999864211000 01112222 23467899999777788
Q ss_pred EEEecccceEEEEeCCcc-----eEEEEeeeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 165 AVARSFSKSIDVYDQDIH-----LRTLRTLWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
+++ +.|+.|++||.... ...+ ..+...+..+.+. |++. .+++++.|++|++||+++.. .++..+..
T Consensus 248 ~s~-~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~---p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~ 319 (430)
T 2xyi_A 248 GSV-ADDQKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFN---PYSEFILATGSADKTVALWDLRNLK--LKLHSFES 319 (430)
T ss_dssp EEE-ETTSEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEEC---SSCTTEEEEEETTSEEEEEETTCTT--SCSEEEEC
T ss_pred EEE-eCCCeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeC---CCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeec
Confidence 888 89999999998632 2222 2344555555543 3444 46678899999999999742 56777776
Q ss_pred cCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCC--------------ceeeeeccccccCceEEEEEcCCCCC-EEEE
Q 017601 239 SVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRR--------------WSALSRWVHCSKYEITGLSFSSIDSN-YIYV 301 (369)
Q Consensus 239 ~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~--------------~~~~~~~~~h~~~~v~~l~~sp~d~~-~l~s 301 (369)
+ ...|++++|+|++ +|++++.|+.|+|||+++ .+.+..+.+| ...|++++|+| ++. +|++
T Consensus 320 h-~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p-~~~~~l~s 396 (430)
T 2xyi_A 320 H-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH-TAKISDFSWNP-NEPWIICS 396 (430)
T ss_dssp C-SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCC-SSCEEEEEECS-SSTTEEEE
T ss_pred C-CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCC-CCCceEEEECC-CCCCEEEE
Confidence 5 6899999999999 699999999999999987 3567788899 89999999999 887 9999
Q ss_pred EECCCeEEEEECcC
Q 017601 302 QGVDYEVFCGQWRE 315 (369)
Q Consensus 302 ~s~D~~i~vwd~~~ 315 (369)
++.|+.|++|++..
T Consensus 397 ~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 397 VSEDNIMQVWQMAE 410 (430)
T ss_dssp EETTSEEEEEEECH
T ss_pred EECCCCEEEeEccc
Confidence 99999999999875
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=2.4e-24 Score=204.21 Aligned_cols=201 Identities=12% Similarity=0.041 Sum_probs=131.5
Q ss_pred EEECCCCceeEEEEecccceEEEEeCCcce----EEEEee-eCCcceeeeccCCC-----CCCCCcEEEEEcCCeEEEEe
Q 017601 154 LCFSPSQWSMAAVARSFSKSIDVYDQDIHL----RTLRTL-WYPSSLNFVQNLSP-----VNGGPNMLAVTEGCQLTIWD 223 (369)
Q Consensus 154 l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~----~~~~~~-~~~~~v~~~~~~~~-----~~~~~~lla~s~d~~v~iwD 223 (369)
+.+.|.+..++|++ +.|++|+|||..... ..+..+ .|...|..+.+.|. ..|+..|++++.|++|+|||
T Consensus 94 ~~~~~~~~~~las~-~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 94 VNSSPVYSLFLACV-CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp ---CCEEEEEEEEE-ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred eeecCCCCCEEEEE-eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 44445466678887 999999999975321 112222 24444554443321 12566788899999999999
Q ss_pred CCcccCCceeeeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeee------------------------
Q 017601 224 LRMKENGGCLHRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSR------------------------ 277 (369)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~------------------------ 277 (369)
++++ .++..+..+ ...|.+++|+|++ +|++|+.|++|++||+++++....
T Consensus 173 ~~~~---~~~~~~~~~-~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 173 LTDE---GPILAGYPL-SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp EETT---EEEEEEEEC-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred CCCC---ceeeeecCC-CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 9877 555444433 3899999999998 799999999999999988654332
Q ss_pred -ccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeee-------------------eeEcC--
Q 017601 278 -WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLG-------------------FSKCS-- 335 (369)
Q Consensus 278 -~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~-------------------~~~~~-- 335 (369)
..+| ...+.++.|++.+++.|++++.|+++++||+..++....+.+|..... ....+
T Consensus 249 ~~~~~-~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 249 HSSGI-ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ---CC-SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred ecccc-cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 2356 778999999744999999999999999999988766665554431100 01111
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcch
Q 017601 336 NRDVLGGWSDSGSIFVADVVAKENE 360 (369)
Q Consensus 336 d~~~l~sgs~dg~I~iWd~~~~~~~ 360 (369)
++.++++|+.||+|++||+.+++..
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE
Confidence 5567889999999999999988653
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.4e-23 Score=203.55 Aligned_cols=201 Identities=8% Similarity=-0.013 Sum_probs=149.7
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
.+|...|.+++|||++ ..||+++.+|.|++|+.+. ....+. |...+...++.+++||| ++.++|++
T Consensus 82 ~~~~~~V~~vawSPdG----~~LAs~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsg- 147 (588)
T 2j04_A 82 SQPVCYPRVCKPSPID----DWMAVLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVG- 147 (588)
T ss_dssp TSCSCCEEEEEECSSS----SCEEEEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEE-
T ss_pred cCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcC-CCCEEEEE-
Confidence 3678999999999984 7999999999999999542 111222 33333334577999999 56688888
Q ss_pred cccceEEEEeCCcc---------eEEEEee--eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 169 SFSKSIDVYDQDIH---------LRTLRTL--WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 169 s~d~~i~lwd~~~~---------~~~~~~~--~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
+.|++|+|||.... +.++... .|...+..+.+ +|++ +++++.|++|++||+..+......+++.
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw---SPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW---YEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE---ETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEE---cCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence 89999999997532 2333211 13334444443 3454 8899999999999998773111334564
Q ss_pred -ccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEE--cCCCCCEEEEEECCCeEEEEECc
Q 017601 238 -GSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSF--SSIDSNYIYVQGVDYEVFCGQWR 314 (369)
Q Consensus 238 -~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~--sp~d~~~l~s~s~D~~i~vwd~~ 314 (369)
++ ...|.+++|+ +..||+++ +++|++||+.+++......+| ...|..++| +| |+..|++++.||+ ++|..+
T Consensus 223 ~~h-~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 223 NAS-RRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGS-LENFHIIPLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCC-SSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSC-CSCCCEEEETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred ccc-cCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCC-CceEEEEEeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 44 5789999999 33888887 699999999988774444488 999999999 99 9999999999999 999974
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=5.1e-22 Score=186.88 Aligned_cols=225 Identities=11% Similarity=0.067 Sum_probs=170.2
Q ss_pred eEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceEEE
Q 017601 109 MVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLRTL 186 (369)
Q Consensus 109 ~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~ 186 (369)
.++++++.++.|++||+.++. ....+..+ ..+.+++|+|++..+++++ +.|++|++||... ..+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~-----~~~~~~~~------~~~~~~~~s~dg~~l~~~~-~~d~~i~v~d~~~~~~~~~~ 70 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK-----VTATIPVG------SNPMGAVISPDGTKVYVAN-AHSNDVSIIDTATNNVIATV 70 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE-----EEEEEECS------SSEEEEEECTTSSEEEEEE-GGGTEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCe-----EEEEeecC------CCcceEEECCCCCEEEEEC-CCCCeEEEEECCCCeEEEEE
Confidence 578888899999999987541 11122221 1256899999665555665 8999999999753 33333
Q ss_pred EeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cE-EEEeCCCc
Q 017601 187 RTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NI-AVAGADRT 263 (369)
Q Consensus 187 ~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~l-asgs~D~~ 263 (369)
. ....+..+.+ ++++..+++++ .+++|++||++++ +.+..+..+ ..+.+++|+|++ .| ++++.|+.
T Consensus 71 ~---~~~~v~~~~~---spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 71 P---AGSSPQGVAV---SPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVKTG--KSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp E---CSSSEEEEEE---CTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECS--SSEEEEEECTTSSEEEEEETTTTE
T ss_pred E---CCCCccceEE---CCCCCEEEEEECCCCEEEEEECCCC---eEEEEEeCC--CCcceEEECCCCCEEEEEeCCCCE
Confidence 2 2223444432 34566665554 5799999999988 777777766 789999999999 55 78888999
Q ss_pred EEEEeCCCceeeeeccccccCceEEEEEcCCCCCEE-EEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEE
Q 017601 264 VTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYI-YVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGG 342 (369)
Q Consensus 264 v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l-~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~s 342 (369)
|++||+++++.+..+..| ..+.+++|+| ++++| ++++.|+.|++||+++++....+..+.....+...+++++|++
T Consensus 140 v~~~d~~~~~~~~~~~~~--~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 216 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSVG--RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYV 216 (391)
T ss_dssp EEEEETTTTEEEEEEECC--SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEEecC--CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEE
Confidence 999999999998888776 4579999999 99887 6778899999999999988888876653345555779998888
Q ss_pred Ee---CCCcEEEEECCCCcc
Q 017601 343 WS---DSGSIFVADVVAKEN 359 (369)
Q Consensus 343 gs---~dg~I~iWd~~~~~~ 359 (369)
++ .++.|++||+++++.
T Consensus 217 ~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 217 TNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEECSSCCEEEEEETTTTEE
T ss_pred EecCcCCCcEEEEECCCCeE
Confidence 88 689999999988753
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=1.7e-22 Score=192.78 Aligned_cols=245 Identities=8% Similarity=-0.026 Sum_probs=178.7
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccc-cccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTY-SVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
.+...+.+++|+|+ ..++++++.++.|++||+.++.. ...... ....| .+.+.+++|+| ++.+++++
T Consensus 120 ~~~~~~~~~~~s~~----~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~~~s~- 187 (433)
T 3bws_A 120 KTGFQPKSVRFIDN----TRLAIPLLEDEGMDVLDINSGQT-VRLSPPEKYKKK-----LGFVETISIPE-HNELWVSQ- 187 (433)
T ss_dssp ECSSCBCCCEESSS----SEEEEEBTTSSSEEEEETTTCCE-EEECCCHHHHTT-----CCEEEEEEEGG-GTEEEEEE-
T ss_pred cCCCCceEEEEeCC----CeEEEEeCCCCeEEEEECCCCeE-eeecCccccccc-----CCceeEEEEcC-CCEEEEEE-
Confidence 34466779999995 36888888889999999876521 100000 11111 22356899988 55677777
Q ss_pred cccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCceeeeeeccCCCcEE
Q 017601 169 SFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCLHRICGSVGDILY 245 (369)
Q Consensus 169 s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~ 245 (369)
+.|+.|++||... .+..+. .+...+..+.+ ++++..+++++ .|+.|++||++++ +.+..+..+ ..+.
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~~d~~~~---~~~~~~~~~--~~~~ 257 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVD--LTGKWSKILLY---DPIRDLVYCSNWISEDISVIDRKTK---LEIRKTDKI--GLPR 257 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEE--CSSSSEEEEEE---ETTTTEEEEEETTTTEEEEEETTTT---EEEEECCCC--SEEE
T ss_pred CCCCEEEEEECCCceEEEEEc--CCCCCeeEEEE---cCCCCEEEEEecCCCcEEEEECCCC---cEEEEecCC--CCce
Confidence 8999999999864 333332 23333333332 24566675555 7999999999987 677777766 7799
Q ss_pred EEEECCCC-cEEEEe--------CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCE-EEEEECCCeEEEEECcC
Q 017601 246 AVCSSSTG-NIAVAG--------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNY-IYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 246 ~v~~sp~g-~lasgs--------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~-l~s~s~D~~i~vwd~~~ 315 (369)
+++|+|+| .|++++ .|+.|++||+++++.+..+ .| ...+.+++|+| +++. +++++.|+.|++||+++
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~-~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GP-PGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EE-EECEEEEEECS-STTEEEEEETTTTEEEEEETTT
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cC-CCCcceEEECC-CCCEEEEEecCCCEEEEEECCC
Confidence 99999999 888877 5899999999998877765 45 56899999999 8865 56678999999999999
Q ss_pred CceeEEEEcCCCeeeeeEcCCCCEEEEEeC---------------CCcEEEEECCCCcc
Q 017601 316 SSKVFAFRGDSNWLGFSKCSNRDVLGGWSD---------------SGSIFVADVVAKEN 359 (369)
Q Consensus 316 ~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~---------------dg~I~iWd~~~~~~ 359 (369)
++....+........+...+++++|++++. ||.|++||+++++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 335 KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 888888865544455666779998888877 57999999988753
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-22 Score=189.05 Aligned_cols=187 Identities=9% Similarity=-0.048 Sum_probs=141.9
Q ss_pred CceeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCccc------CCc
Q 017601 160 QWSMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKE------NGG 231 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~------~~~ 231 (369)
++.+++++ +.|++|++||.. +.+..+. ......+ .+.|+ +++++.|++|++|+..... ..+
T Consensus 47 d~~~l~sg-~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~------~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCR-CEDGALHFTQLKDSKTITTIT-TPNPRTG------GEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEE-EETTEEEEEEESSSSCEEEEE-EECCCTT------CCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCEEEEE-CCCCcEEEEECCCCcEEEEEe-cCCceee------eeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 45677877 999999999975 3444443 1122222 22232 8999999999999776220 114
Q ss_pred eeeeeeccCCCcEEEEEECC--CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeE
Q 017601 232 CLHRICGSVGDILYAVCSSS--TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEV 308 (369)
Q Consensus 232 ~~~~~~~~~~~~v~~v~~sp--~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i 308 (369)
.++.+...+...|.+++|+| ++ ++++|+.|++|++||+++++.+.....++...|++++|+| ++.+|++|+.|+.|
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i 194 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGIL 194 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEE
Confidence 45454422247899999999 99 9999999999999999999887776554366899999999 99999999999999
Q ss_pred EEEECcCCcee-EEEEc-CCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 309 FCGQWRESSKV-FAFRG-DSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 309 ~vwd~~~~~~~-~~~~g-~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
++||+++++.. ..+.+ |.. ...+..++++.+|+++++ +.|++||+++++.
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVG 247 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTT
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCc
Confidence 99999998877 78887 763 234445779999999994 5999999998754
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.5e-23 Score=209.76 Aligned_cols=204 Identities=14% Similarity=0.107 Sum_probs=157.5
Q ss_pred CCeeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCc
Q 017601 149 GSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRM 226 (369)
Q Consensus 149 ~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~ 226 (369)
+.+.+++|+|+ +.+++++ +.|++|++||... ........ .|...+..+.+.+. .++..+++++.||+|++||+++
T Consensus 10 ~~V~~l~~s~d-g~~latg-~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 10 ELIHDAVLDYY-GKRLATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CCEEEECCCSS-SCCEEEE-ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEEEEET
T ss_pred ceeEEEEECCC-CCeEEEE-ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEEECCC
Confidence 34678999995 4578887 8999999999752 12222222 35555655554321 1267889999999999999987
Q ss_pred ccCCceeeeeeccCCCcEEEEEECCC--C-cEEEEeCCCcEEEEeCCCce--eeeeccccccCceEEEEEcCC-------
Q 017601 227 KENGGCLHRICGSVGDILYAVCSSST--G-NIAVAGADRTVTIYDPRRWS--ALSRWVHCSKYEITGLSFSSI------- 294 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~sp~--g-~lasgs~D~~v~vwD~~~~~--~~~~~~~h~~~~v~~l~~sp~------- 294 (369)
+. ...+..+..+ ...|++++|+|+ + .+++|+.||+|++||++++. ....+.+| ...|++++|+|.
T Consensus 87 ~~-~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 87 GR-WSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp TE-EEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC-SSCEEEEEECCCC------
T ss_pred Cc-ccccccccCC-CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC-CCceEEEEecCcccccccc
Confidence 61 1155556655 689999999999 8 99999999999999999863 34566788 899999999994
Q ss_pred -----CCCEEEEEECCCeEEEEECcCC----ceeEEEEcCCCe-eeeeEcCC---CCEEEEEeCCCcEEEEECCCCc
Q 017601 295 -----DSNYIYVQGVDYEVFCGQWRES----SKVFAFRGDSNW-LGFSKCSN---RDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 295 -----d~~~l~s~s~D~~i~vwd~~~~----~~~~~~~g~~~~-~~~~~~~d---~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++.++++++.|++|++||++++ .+...+.+|... ..+..+++ +.+|++|+.||.|++||+.+++
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 4899999999999999999886 556677788732 23444677 8999999999999999998864
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=8.4e-23 Score=186.72 Aligned_cols=203 Identities=12% Similarity=0.032 Sum_probs=126.9
Q ss_pred CccceeeEEEEeecCCCCceEEEEEec--------------------CCcEEEEEecCCCCCCccccccccCCCCCCCCC
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDS--------------------YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEG 149 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~--------------------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (369)
-|.++|++|+|+|+...-...+++++. ++.|++|++.+..+.+ .....|..
T Consensus 109 ~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~----~s~~~~~~----- 179 (356)
T 2w18_A 109 LEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGK----ENQFLMPP----- 179 (356)
T ss_dssp SSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEE----EEEEECCC-----
T ss_pred ccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCcee----eeeccCCC-----
Confidence 467899999999982211245555443 5566666664321111 11111111
Q ss_pred CeeEEEECC--CCceeEEEEecccceEEEEeCC--cceEEEEeee-CCcceeeeccCCCCCCCCcE------------EE
Q 017601 150 SWSGLCFSP--SQWSMAAVARSFSKSIDVYDQD--IHLRTLRTLW-YPSSLNFVQNLSPVNGGPNM------------LA 212 (369)
Q Consensus 150 ~~~~l~~~p--~~~~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l------------la 212 (369)
....++|+| .++..+|++ +.|++|+|||.. +.++++.... +...+..+. |+|++..+ ++
T Consensus 180 ~v~~l~fs~~~g~~~~LaSg-S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va---fSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGT-TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA---YSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEE-ETTSEEEEEETTTCCEEEEEECCC---CCCEEEE---EEETTEEEEEEC----------
T ss_pred ceeeEEeeccCCCCceEEEe-cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE---ECCCCCEEEEeccCCCcceeec
Confidence 233577777 234567777 999999999985 4556554211 111221111 22334433 45
Q ss_pred EEcCCeEEEEeCCcccCCceeeeee-----ccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCce
Q 017601 213 VTEGCQLTIWDLRMKENGGCLHRIC-----GSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEI 286 (369)
Q Consensus 213 ~s~d~~v~iwD~~~~~~~~~~~~~~-----~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v 286 (369)
++.|++|++||..++ +.+..+. ++ ...+.+.+++ + .+|+|+.|++|+|||+++++++.++.+| ...+
T Consensus 256 Gs~D~tIklWd~~tg---k~l~v~~~~~p~Gh-~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH-~~~v 328 (356)
T 2w18_A 256 RSPVFQLIVINPKTT---LSVGVMLYCLPPGQ-AGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPV-SDQH 328 (356)
T ss_dssp --CCEEEEEEETTTT---EEEEEEEECCCTTC-CCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC---CC
T ss_pred cCCCcEEEEEECCCC---EEEEEEEeeccCCC-cceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCC-CCCe
Confidence 778999999999988 6665542 33 2335445554 7 8999999999999999999999999999 6665
Q ss_pred E-EEEEcCCCCCEEEEEECCCeEEEEEC
Q 017601 287 T-GLSFSSIDSNYIYVQGVDYEVFCGQW 313 (369)
Q Consensus 287 ~-~l~~sp~d~~~l~s~s~D~~i~vwd~ 313 (369)
. .++||| |+++|+||+.|++|+|||+
T Consensus 329 vs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 329 WSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 5 689999 9999999999999999996
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=5.4e-19 Score=168.65 Aligned_cols=215 Identities=13% Similarity=0.041 Sum_probs=148.2
Q ss_pred CcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc---eEEEEeCCcceEEEEeeeCCcc
Q 017601 118 GHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK---SIDVYDQDIHLRTLRTLWYPSS 194 (369)
Q Consensus 118 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~---~i~lwd~~~~~~~~~~~~~~~~ 194 (369)
+.|++||++... ...+..+. ..+.+++|+|++ ..++++ +.++ .|++||....... ....+...
T Consensus 159 ~~i~i~d~~g~~------~~~l~~~~-----~~v~~~~~Spdg-~~la~~-s~~~~~~~i~~~d~~tg~~~-~l~~~~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYN------QFVVHRSP-----QPLMSPAWSPDG-SKLAYV-TFESGRSALVIQTLANGAVR-QVASFPRH 224 (415)
T ss_dssp EEEEEEETTSCS------CEEEEEES-----SCEEEEEECTTS-SEEEEE-ECTTSSCEEEEEETTTCCEE-EEECCSSC
T ss_pred ceEEEEcCCCCC------CEEEeCCC-----CcceeeEEcCCC-CEEEEE-EecCCCcEEEEEECCCCcEE-EeecCCCc
Confidence 799999987431 11222221 235689999955 466776 5554 9999998632221 22223333
Q ss_pred eeeeccCCCCCCCCcEE-EEEcCC--eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC-CC--cEEEE
Q 017601 195 LNFVQNLSPVNGGPNML-AVTEGC--QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA-DR--TVTIY 267 (369)
Q Consensus 195 v~~~~~~~~~~~~~~ll-a~s~d~--~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~-D~--~v~vw 267 (369)
+..+. ++||+..|+ +++.|+ .|.+||++++ +. ..+..+ ...+.+++|+|+| .|++++. ++ .|.+|
T Consensus 225 ~~~~~---~spdg~~la~~~~~~g~~~i~~~d~~~~---~~-~~l~~~-~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 225 NGAPA---FSPDGSKLAFALSKTGSLNLYVMDLASG---QI-RQVTDG-RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp EEEEE---ECTTSSEEEEEECTTSSCEEEEEETTTC---CE-EECCCC-SSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccCEE---EcCCCCEEEEEEecCCCceEEEEECCCC---CE-EeCcCC-CCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 44444 345676677 444454 5999999887 44 444444 4789999999999 7888776 45 67777
Q ss_pred eCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECC---CeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEe
Q 017601 268 DPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD---YEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 268 D~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D---~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs 344 (369)
|+.+++. ..+..| ...+.+++|+| |+++|++++.+ ..|++||+.+++.. .+..+.....+...+||++|+.++
T Consensus 297 d~~~~~~-~~l~~~-~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 297 NINGGAP-QRITWE-GSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp ETTSSCC-EECCCS-SSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEEEE
T ss_pred ECCCCCE-EEEecC-CCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEEEE
Confidence 9887763 455666 77899999999 99999988875 58999999987764 344443334556678999999888
Q ss_pred CCC---cEEEEECCCCc
Q 017601 345 DSG---SIFVADVVAKE 358 (369)
Q Consensus 345 ~dg---~I~iWd~~~~~ 358 (369)
.++ .|++||+..+.
T Consensus 373 ~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 373 SQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EETTEEEEEEEETTSCC
T ss_pred cCCCccEEEEEECCCCc
Confidence 877 79999997553
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=4.1e-18 Score=168.01 Aligned_cols=291 Identities=8% Similarity=-0.029 Sum_probs=190.6
Q ss_pred EEeCCeEEEEEEeCCchhh-hcCCCccccccCc--ccccccccccCCccceeeEEEEee----cCCCCceEEEEEe-cCC
Q 017601 47 IASGCHLYKLQVMMDDWFV-SEGKDSLLIPEQT--PVMDSSMLNRCPHRSEVQSIALAE----TDSSGYMVLGSVD-SYG 118 (369)
Q Consensus 47 ~as~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~V~~l~~s~----~~~~~~~~las~d-~~g 118 (369)
+..|..+..+++.+++..+ ..+.++.+..++. +.. ..+..+.+...+..++|+| |+ ..+++++ .++
T Consensus 175 i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~~g~~p~~va~sp~~~~dg----~~l~v~~~~~~ 248 (543)
T 1nir_A 175 IDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEIKIGIEARSVESSKFKGYED----RYTIAGAYWPP 248 (543)
T ss_dssp EECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEEECCSEEEEEEECCSTTCTT----TEEEEEEEESS
T ss_pred EecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEEecCCCcceEEeCCCcCCCC----CEEEEEEccCC
Confidence 3445556666777766554 3333343333333 222 2223345667789999999 84 4555555 478
Q ss_pred cEEEEEecCCCCCCccccccccCCCC----CCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceE--EEEeee
Q 017601 119 HLIVSKLDTSGKDVDRLTYSVLPQDC----GVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLR--TLRTLW 190 (369)
Q Consensus 119 ~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~--~~~~~~ 190 (369)
.|.+||..+.. .+. .....+... -+.+..+.+++++|+++..+++. ..+++|.+||... ... .+....
T Consensus 249 ~v~v~D~~t~~-~~~--~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~~~g~i~vvd~~~~~~l~~~~i~~~~ 324 (543)
T 1nir_A 249 QFAIMDGETLE-PKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-KETGKVLLVNYKDIDNLTVTSIGAAP 324 (543)
T ss_dssp EEEEEETTTCC-EEE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEECTTSSSCEEEEEECCS
T ss_pred eEEEEeccccc-cce--eecccCcccCccccccCCceEEEEECCCCCEEEEEE-CCCCeEEEEEecCCCcceeEEeccCc
Confidence 99999976541 110 111100000 01122356899999777777776 8899999999753 222 222212
Q ss_pred CCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCceeeeeecc---CCCcEEEEEECCCC--cEEEEe-CCCc
Q 017601 191 YPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCLHRICGS---VGDILYAVCSSSTG--NIAVAG-ADRT 263 (369)
Q Consensus 191 ~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~~~~~~~---~~~~v~~v~~sp~g--~lasgs-~D~~ 263 (369)
.+..+. ++|++.++++++ .+++|.+||++++ +++..+... +.+....+ ++|++ .+++++ .|++
T Consensus 325 ~~~~~~------~spdg~~l~va~~~~~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 325 FLHDGG------WDSSHRYFMTAANNSNKVAVIDSKDR---RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp SCCCEE------ECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred CccCce------ECCCCCEEEEEecCCCeEEEEECCCC---eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence 233333 345677777655 5899999999998 777776631 01222223 57874 677776 6899
Q ss_pred EEEEeCCC-------ceeeeeccccccCceEEEEEcCCCCCEEEEEE-------CCCeEEEEECcCCcee-EEE------
Q 017601 264 VTIYDPRR-------WSALSRWVHCSKYEITGLSFSSIDSNYIYVQG-------VDYEVFCGQWRESSKV-FAF------ 322 (369)
Q Consensus 264 v~vwD~~~-------~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-------~D~~i~vwd~~~~~~~-~~~------ 322 (369)
|.|||+.+ ++++.++.+| ...+..+.|+| ++++|++++ .+++|.+||+.+.+.. ..+
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~-g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~ 472 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQ-GGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA 472 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECS-CSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcC-CCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhc
Confidence 99999998 8999999999 88899999999 999999987 3789999999998776 443
Q ss_pred --EcC-CCeeeeeEcCCCCEEEEE-----eCCCcEEEEECCCCcc
Q 017601 323 --RGD-SNWLGFSKCSNRDVLGGW-----SDSGSIFVADVVAKEN 359 (369)
Q Consensus 323 --~g~-~~~~~~~~~~d~~~l~sg-----s~dg~I~iWd~~~~~~ 359 (369)
..+ .+...++..++|+.|+.+ +.|+.|.|||.++++.
T Consensus 473 ~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 473 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 122 223456667899987755 3589999999999874
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=1.4e-17 Score=152.43 Aligned_cols=226 Identities=8% Similarity=-0.011 Sum_probs=158.4
Q ss_pred eEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--ceEEE
Q 017601 109 MVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--HLRTL 186 (369)
Q Consensus 109 ~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~~~~~ 186 (369)
.++++...++.|++||..++.. .....+ ++.. +...+++|+|++..+++++ +.++.|.+||... .+..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~----~~~~~~~~s~dg~~l~v~~-~~~~~v~~~d~~~~~~~~~~ 72 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV---DKVITI-ADAG----PTPMVPMVAPGGRIAYATV-NKSESLVKIDLVTGETLGRI 72 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE---EEEEEC-TTCT----TCCCCEEECTTSSEEEEEE-TTTTEEEEEETTTCCEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcE---EEEEEc-CCCC----CCccceEEcCCCCEEEEEe-CCCCeEEEEECCCCCeEeeE
Confidence 3677888899999999875411 101111 1100 0123699999765555655 7889999999753 33333
Q ss_pred Eeee------CCcceeeeccCCCCCCCCcEEEEE------------cCCeEEEEeCCcccCCceeeeeeccCCCcEEEEE
Q 017601 187 RTLW------YPSSLNFVQNLSPVNGGPNMLAVT------------EGCQLTIWDLRMKENGGCLHRICGSVGDILYAVC 248 (369)
Q Consensus 187 ~~~~------~~~~v~~~~~~~~~~~~~~lla~s------------~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~ 248 (369)
.... .+..+.+ ++++..++++. .++.|.+||+.++ +.+..+... ..+.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~------s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---~~~~~~~~~--~~~~~~~ 141 (337)
T 1pby_B 73 DLSTPEERVKSLFGAAL------SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL---SRRKAFEAP--RQITMLA 141 (337)
T ss_dssp ECCBTTEEEECTTCEEE------CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT---EEEEEEECC--SSCCCEE
T ss_pred EcCCcccccccccceEE------CCCCCEEEEEecccccccccccccCceEEEEECCCC---cEEEEEeCC--CCcceeE
Confidence 3221 3333433 34566666664 5799999999887 666666654 6788899
Q ss_pred ECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc---------------------------------------------
Q 017601 249 SSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS--------------------------------------------- 282 (369)
Q Consensus 249 ~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~--------------------------------------------- 282 (369)
|+|+| +|+++ ++.|.+||+.+++....+..+.
T Consensus 142 ~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 142 WARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp ECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 99999 78777 6889999999877664443220
Q ss_pred --------------------cCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEE
Q 017601 283 --------------------KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGG 342 (369)
Q Consensus 283 --------------------~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~s 342 (369)
...+.+++|+| ++++++++ ++.|++||+.+++.+..+..+....++...+|+++|++
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 296 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWL 296 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEE
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEE
Confidence 11344689999 99999888 79999999999888887765443345666789999998
Q ss_pred EeCCCcEEEEECCCCcc
Q 017601 343 WSDSGSIFVADVVAKEN 359 (369)
Q Consensus 343 gs~dg~I~iWd~~~~~~ 359 (369)
++.++.|++||+++++.
T Consensus 297 ~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 297 GGALGDLAAYDAETLEK 313 (337)
T ss_dssp ESBSSEEEEEETTTCCE
T ss_pred EcCCCcEEEEECcCCcE
Confidence 99999999999998763
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.82 E-value=1.6e-18 Score=170.93 Aligned_cols=241 Identities=11% Similarity=0.003 Sum_probs=165.7
Q ss_pred eeEEEEeecCCCCceEEEEEecCCcEEEEEe--cCCCCCCccccccccCCCCCCCCCCeeEEEECC----CCceeEEEEe
Q 017601 95 VQSIALAETDSSGYMVLGSVDSYGHLIVSKL--DTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSP----SQWSMAAVAR 168 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p----~~~~~~a~~~ 168 (369)
+..++|+||+ ..+++++.++.|.+||+ .+. . ....+.. ..+..+++|+| ++.. ++++.
T Consensus 181 ~~~v~~spdg----~~l~v~~~d~~V~v~D~~~~t~-~----~~~~i~~------g~~p~~va~sp~~~~dg~~-l~v~~ 244 (543)
T 1nir_A 181 VHISRMSASG----RYLLVIGRDARIDMIDLWAKEP-T----KVAEIKI------GIEARSVESSKFKGYEDRY-TIAGA 244 (543)
T ss_dssp EEEEEECTTS----CEEEEEETTSEEEEEETTSSSC-E----EEEEEEC------CSEEEEEEECCSTTCTTTE-EEEEE
T ss_pred cceEEECCCC----CEEEEECCCCeEEEEECcCCCC-c----EEEEEec------CCCcceEEeCCCcCCCCCE-EEEEE
Confidence 8899999984 68888888899999999 432 1 1111211 11245799999 7664 55552
Q ss_pred cccceEEEEeCC--cceEEEEeee--------CCc-ceeeeccCCCCCCCCcE-EEEEcCCeEEEEeCCcccCCceeeee
Q 017601 169 SFSKSIDVYDQD--IHLRTLRTLW--------YPS-SLNFVQNLSPVNGGPNM-LAVTEGCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 169 s~d~~i~lwd~~--~~~~~~~~~~--------~~~-~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD~~~~~~~~~~~~~ 236 (369)
..+++|.+||.. +.++.+.... ++. .+..+. +++++..+ ++..++++|.+||..+.+.. .+..+
T Consensus 245 ~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~---~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-~~~~i 320 (543)
T 1nir_A 245 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII---ASHEHPEFIVNVKETGKVLLVNYKDIDNL-TVTSI 320 (543)
T ss_dssp EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE---ECSSSSEEEEEETTTTEEEEEECTTSSSC-EEEEE
T ss_pred ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEE---ECCCCCEEEEEECCCCeEEEEEecCCCcc-eeEEe
Confidence 568999999975 3444443311 111 222222 22344444 44567899999999876321 12244
Q ss_pred eccCCCcEEEEEECCCC-cEE-EEeCCCcEEEEeCCCceeeeeccc----cccCceEEEEEcCCC-CCEEEEEE-CCCeE
Q 017601 237 CGSVGDILYAVCSSSTG-NIA-VAGADRTVTIYDPRRWSALSRWVH----CSKYEITGLSFSSID-SNYIYVQG-VDYEV 308 (369)
Q Consensus 237 ~~~~~~~v~~v~~sp~g-~la-sgs~D~~v~vwD~~~~~~~~~~~~----h~~~~v~~l~~sp~d-~~~l~s~s-~D~~i 308 (369)
.. +..+..++|+|+| +|+ ++..+++|.+||+++++++.++.. | ......+ ++| + +..+++++ .|++|
T Consensus 321 ~~--~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph-~g~g~~~-~~p-~~g~~~~s~~~~d~~V 395 (543)
T 1nir_A 321 GA--APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH-PGRGANF-VHP-KYGPVWSTSHLGDGSI 395 (543)
T ss_dssp EC--CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBC-CTTCEEE-EET-TTEEEEEEEBSSSSEE
T ss_pred cc--CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCC-CCCCccc-CCC-CCccEEEeccCCCceE
Confidence 43 3678889999999 555 455689999999999999887764 5 4444343 467 5 66677775 58999
Q ss_pred EEEECcC-------CceeEEEEcCCCe-eeeeEcCCCCEEEEEe-------CCCcEEEEECCCCcch
Q 017601 309 FCGQWRE-------SSKVFAFRGDSNW-LGFSKCSNRDVLGGWS-------DSGSIFVADVVAKENE 360 (369)
Q Consensus 309 ~vwd~~~-------~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs-------~dg~I~iWd~~~~~~~ 360 (369)
.+||+.+ .++++.+.+|... ..+...+++++|++++ .+++|.+||+.+++..
T Consensus 396 ~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 396 SLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 9999998 7899999988633 3455578999999988 2789999999988753
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=1.4e-17 Score=152.91 Aligned_cols=253 Identities=8% Similarity=-0.014 Sum_probs=156.8
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecC-CcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSY-GHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
...|...+.+++|+|++ ..+++++.+ +.+.+|+++........ ...+... +...+++|+|++..++++
T Consensus 33 ~~~~~~~~~~~~~spdg----~~l~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~s~dg~~l~~~ 101 (343)
T 1ri6_A 33 VVDVPGQVQPMVVSPDK----RYLYVGVRPEFRVLAYRIAPDDGALTF-AAESALP------GSLTHISTDHQGQFVFVG 101 (343)
T ss_dssp EEECSSCCCCEEECTTS----SEEEEEETTTTEEEEEEECTTTCCEEE-EEEEECS------SCCSEEEECTTSSEEEEE
T ss_pred eEecCCCCceEEECCCC----CEEEEeecCCCeEEEEEecCCCCceee-ccccccC------CCCcEEEEcCCCCEEEEE
Confidence 34567789999999984 456655554 89999999732111110 0111111 123479999966544444
Q ss_pred EecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCcee--e--eeecc
Q 017601 167 ARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCL--H--RICGS 239 (369)
Q Consensus 167 ~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~--~--~~~~~ 239 (369)
+ ..++.|.+||.. ..............+..+. +++++..+++++ .++.|.+||+.+.. +.. . .+...
T Consensus 102 ~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~ 175 (343)
T 1ri6_A 102 S-YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSAN---ISPDNRTLWVPALKQDRICLFTVSDDG--HLVAQDPAEVTTV 175 (343)
T ss_dssp E-TTTTEEEEEEEETTEEEEEEEEECCCTTBCCCE---ECTTSSEEEEEEGGGTEEEEEEECTTS--CEEEEEEEEEECS
T ss_pred e-cCCCeEEEEECCCCccccccccccCCCCceEEE---ECCCCCEEEEecCCCCEEEEEEecCCC--ceeeecccccccC
Confidence 4 668999999983 1112222222222222222 335666777766 78999999998721 222 1 22222
Q ss_pred CCCcEEEEEECCCC-cEEE-EeCCCcEEEEeCCC--cee--eeecc----cc-ccCceEEEEEcCCCCCEEE-EEECCCe
Q 017601 240 VGDILYAVCSSSTG-NIAV-AGADRTVTIYDPRR--WSA--LSRWV----HC-SKYEITGLSFSSIDSNYIY-VQGVDYE 307 (369)
Q Consensus 240 ~~~~v~~v~~sp~g-~las-gs~D~~v~vwD~~~--~~~--~~~~~----~h-~~~~v~~l~~sp~d~~~l~-s~s~D~~ 307 (369)
.+..+.+++|+|+| ++++ +..++.|.+||+.. ++. ...+. ++ ....+..++|+| ++++|+ +.+.|+.
T Consensus 176 ~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 176 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASL 254 (343)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCE
Confidence 13578899999999 5654 45899999999953 322 22221 11 023567899999 998877 4557999
Q ss_pred EEEEECcC----CceeEEEEcCCCeeeeeEcCCCCEEEEEe-CCCcEEEEEC--CCCc
Q 017601 308 VFCGQWRE----SSKVFAFRGDSNWLGFSKCSNRDVLGGWS-DSGSIFVADV--VAKE 358 (369)
Q Consensus 308 i~vwd~~~----~~~~~~~~g~~~~~~~~~~~d~~~l~sgs-~dg~I~iWd~--~~~~ 358 (369)
|++||+.. .+.+..+..+.....+...+++++|+.++ .++.|.+|++ ++++
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 99999983 23444554444234556677999888777 6899999954 4553
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=3.6e-18 Score=152.96 Aligned_cols=234 Identities=12% Similarity=-0.031 Sum_probs=153.8
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecC-CCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDT-SGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
+..|.+.|.+++|+|++ ..+++++ ++.|++||+.+ +.. ......+ ....+.+++|+|++. .+++
T Consensus 37 ~~~~~~~v~~~~~spdg----~~l~~~~-~~~i~~~d~~~~~~~-----~~~~~~~----~~~~~~~~~~spdg~-~l~~ 101 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDG----KYLLLNS-EGLLYRLSLAGDPSP-----EKVDTGF----ATICNNDHGISPDGA-LYAI 101 (297)
T ss_dssp EEEESSCCEEEEECTTS----SEEEEEE-TTEEEEEESSSCCSC-----EECCCTT----CCCBCSCCEECTTSS-EEEE
T ss_pred eccCCcceEeeEECCCC----CEEEEEc-CCeEEEEeCCCCCCc-----eEecccc----ccccccceEECCCCC-EEEE
Confidence 45688999999999984 5666655 78999999986 421 1111111 112244799999654 5565
Q ss_pred Ee-cccceEEEEe--CC-cceEEEEeeeCCcceeeeccCCCCCCCCcEE-EEEcCCeEEEEeCCcccCCceeeeeeccCC
Q 017601 167 AR-SFSKSIDVYD--QD-IHLRTLRTLWYPSSLNFVQNLSPVNGGPNML-AVTEGCQLTIWDLRMKENGGCLHRICGSVG 241 (369)
Q Consensus 167 ~~-s~d~~i~lwd--~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ll-a~s~d~~v~iwD~~~~~~~~~~~~~~~~~~ 241 (369)
+. ..++.++||. .. ...+.+ .....+..+. ++|++..++ +++.++.++||++.... .....+..+ .
T Consensus 102 ~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~---~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~~-~ 172 (297)
T 2ojh_A 102 SDKVEFGKSAIYLLPSTGGTPRLM---TKNLPSYWHG---WSPDGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTHG-E 172 (297)
T ss_dssp EECTTTSSCEEEEEETTCCCCEEC---CSSSSEEEEE---ECTTSSEEEEEEEETTEEEEEEEETTT--CCEEECCCS-S
T ss_pred EEeCCCCcceEEEEECCCCceEEe---ecCCCccceE---ECCCCCEEEEEECCCCceEEEEEECCC--CcceEcccC-C
Confidence 52 1334556654 33 222222 2222233333 335666776 56789999999965321 233444433 4
Q ss_pred CcEEEEEECCCC-cEEEEe-CCCcEEEEeCC-CceeeeeccccccCceEEEEEcCCCCCEEEEEECC-----------Ce
Q 017601 242 DILYAVCSSSTG-NIAVAG-ADRTVTIYDPR-RWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD-----------YE 307 (369)
Q Consensus 242 ~~v~~v~~sp~g-~lasgs-~D~~v~vwD~~-~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D-----------~~ 307 (369)
..+.+++|+|+| .|+.++ .++.++||++. .+..+..+..| ...+..++|+| ++++|+.++.| +.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS-AYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC-SEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC-CcccCCeEECC-CCCEEEEEEcCCCCCcccccCceE
Confidence 789999999999 676655 59999999986 46667788888 78899999999 99999988876 57
Q ss_pred EEEEECcCCcee--EEEEcCC-CeeeeeEcCCCCEEEEEeCCC
Q 017601 308 VFCGQWRESSKV--FAFRGDS-NWLGFSKCSNRDVLGGWSDSG 347 (369)
Q Consensus 308 i~vwd~~~~~~~--~~~~g~~-~~~~~~~~~d~~~l~sgs~dg 347 (369)
|++||+.+++.. ..+.+|. ....+...++++.|++++.+.
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999999887653 3343554 123344467999888777653
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=9e-19 Score=167.10 Aligned_cols=244 Identities=13% Similarity=-0.006 Sum_probs=159.0
Q ss_pred ccceeeEEEEeecCCCCceEEEEEe----cCC----cEEEEEe--cCCCCCCccccccccCCCCCCCCCCeeEEEECCC-
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVD----SYG----HLIVSKL--DTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS- 159 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d----~~g----~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~- 159 (369)
+..+|+..+|.+.+ ...++++. .+| .+++||+ .++. .+.. ..+..+.. .+..+++++.
T Consensus 61 ~~~~~~~~~w~~~g---~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~-~~~~--~~~~~~~~-----~~~~~~~~~~d 129 (415)
T 2hqs_A 61 SAQEVQPAAWSALG---IDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT-VLAQ--NSYKVNKQ-----WLRYAGHTASD 129 (415)
T ss_dssp SGGGCCHHHHHTTT---CCEEEEEEEEECTTSCEEEEEEEEECSSSTTC-EEEE--EEEEECGG-----GHHHHHHHHHH
T ss_pred cccCcCHHHHHhcC---CCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC-EEee--eEEEcChh-----HHHHHHHHHHH
Confidence 45688888898874 23444432 567 8999999 6542 1111 11111111 0112333220
Q ss_pred ------------CceeEEEEecc--c---ceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCC---e
Q 017601 160 ------------QWSMAAVARSF--S---KSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGC---Q 218 (369)
Q Consensus 160 ------------~~~~~a~~~s~--d---~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~---~ 218 (369)
....++.++.. + ++|++||.+. ..+.+.. +...+.... ++|++..|++++.++ +
T Consensus 130 ~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~--~~~~v~~~~---~Spdg~~la~~s~~~~~~~ 204 (415)
T 2hqs_A 130 EVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHR--SPQPLMSPA---WSPDGSKLAYVTFESGRSA 204 (415)
T ss_dssp HHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEE--ESSCEEEEE---ECTTSSEEEEEECTTSSCE
T ss_pred HHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeC--CCCcceeeE---EcCCCCEEEEEEecCCCcE
Confidence 12344444222 2 7999999863 3343332 333344444 345777888888775 9
Q ss_pred EEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEE-EEeCCCc--EEEEeCCCceeeeeccccccCceEEEEEcCC
Q 017601 219 LTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIA-VAGADRT--VTIYDPRRWSALSRWVHCSKYEITGLSFSSI 294 (369)
Q Consensus 219 v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~la-sgs~D~~--v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~ 294 (369)
|++||++++ ++.. +..+ ...+.+++|+||| .|+ +++.|+. |++||+++++. ..+..| ...+.+++|+|
T Consensus 205 i~~~d~~tg---~~~~-l~~~-~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~-~~~~~~~~~sp- 276 (415)
T 2hqs_A 205 LVIQTLANG---AVRQ-VASF-PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG-RSNNTEPTWFP- 276 (415)
T ss_dssp EEEEETTTC---CEEE-EECC-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC-SSCEEEEEECT-
T ss_pred EEEEECCCC---cEEE-eecC-CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC-CCcccceEECC-
Confidence 999999987 5543 4433 4789999999999 676 6766665 99999998765 677788 88999999999
Q ss_pred CCCEEEEEEC-CC--eEEEEECcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCC---CcEEEEECCCCcc
Q 017601 295 DSNYIYVQGV-DY--EVFCGQWRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDS---GSIFVADVVAKEN 359 (369)
Q Consensus 295 d~~~l~s~s~-D~--~i~vwd~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~d---g~I~iWd~~~~~~ 359 (369)
|++.|+.++. ++ .|++||+.+++.. .+..+... ..+..++||++|+.++.+ ..|++||+.+++.
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 9999998886 44 6888898877643 33334322 234457899999888764 6899999998764
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=3.5e-19 Score=170.98 Aligned_cols=196 Identities=11% Similarity=0.024 Sum_probs=135.1
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcc------------eEEE---EeeeCCcceeeeccCCCCCCCCcEE----EE
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIH------------LRTL---RTLWYPSSLNFVQNLSPVNGGPNML----AV 213 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~------------~~~~---~~~~~~~~v~~~~~~~~~~~~~~ll----a~ 213 (369)
.+++++.+ .+++++ +.++ +++|+.... .... ....+...+..+.+ ++++..|+ ++
T Consensus 41 ~lavs~~~-~~l~~~-~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---spdg~~lav~~~sg 114 (434)
T 2oit_A 41 LLAVSNKY-GLVFAG-GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL---SCDNLTLSACMMSS 114 (434)
T ss_dssp CEEEETTT-TEEEEE-ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE---CTTSCEEEEEEEET
T ss_pred EEEEecCC-CEEEEE-CCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE---cCCCCEEEEEEecc
Confidence 58999954 566666 6666 899864211 1100 01112233444443 35666777 56
Q ss_pred EcCCeEEEEeCCccc-----CCce---eeeeeccCCCcEEEEEECCC-C-cEEEEeCCCcEEEEeCCCceeeeecccccc
Q 017601 214 TEGCQLTIWDLRMKE-----NGGC---LHRICGSVGDILYAVCSSST-G-NIAVAGADRTVTIYDPRRWSALSRWVHCSK 283 (369)
Q Consensus 214 s~d~~v~iwD~~~~~-----~~~~---~~~~~~~~~~~v~~v~~sp~-g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~ 283 (369)
+.|++|+|||+++.. ..++ +..+.+| ...|++++|+|+ + +|++++.||+|++||++++..+....+| .
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~-~ 192 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA-GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS-T 192 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG-GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG-G
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCC-CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC-C
Confidence 679999999987641 1111 3334444 588999999998 5 8999999999999999998777777788 8
Q ss_pred CceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCC--------eeeeeEcCCCCEEEE-EeCCCc------
Q 017601 284 YEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSN--------WLGFSKCSNRDVLGG-WSDSGS------ 348 (369)
Q Consensus 284 ~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~--------~~~~~~~~d~~~l~s-gs~dg~------ 348 (369)
..|++++|+| ++++|++++.|++|++||++ ++....+..|.. ...+...+++.++++ .+.||.
T Consensus 193 ~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 193 VAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 9999999999 99999999999999999998 555555544321 123333446666543 444433
Q ss_pred EEEEECCCCc
Q 017601 349 IFVADVVAKE 358 (369)
Q Consensus 349 I~iWd~~~~~ 358 (369)
+++|++...+
T Consensus 271 v~i~~l~~~~ 280 (434)
T 2oit_A 271 VVMALLPKKE 280 (434)
T ss_dssp EEEEECCCTT
T ss_pred eEEEEeccCC
Confidence 8999998653
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=5.3e-17 Score=149.90 Aligned_cols=241 Identities=12% Similarity=0.028 Sum_probs=168.6
Q ss_pred CccceeeEEEEeecCCCCceEEEEEe-------cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCce
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVD-------SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS 162 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d-------~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 162 (369)
.....+..++|+|++ ..++..+ .++.|++||..+... ...+.... ...+++|+|++..
T Consensus 38 ~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-----~~~~~~~~------~~~~~~~s~dg~~ 102 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQE----NALWLATSQSRKLDKGGVVYRLDPVTLEV-----TQAIHNDL------KPFGATINNTTQT 102 (353)
T ss_dssp EEESSEEEEEEETTT----TEEEEEECCCTTTEESEEEEEECTTTCCE-----EEEEEESS------CCCSEEEETTTTE
T ss_pred hhccCccceEECCCC----CEEEEEcCCCcCCCCCccEEEEcCCCCeE-----EEEEecCC------CcceEEECCCCCE
Confidence 344678899999984 3444433 267899999875421 11111111 1226899997665
Q ss_pred eEEEEecccceEEEEeCC--cceEEEEeeeC----------CcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCccc
Q 017601 163 MAAVARSFSKSIDVYDQD--IHLRTLRTLWY----------PSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKE 228 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~ 228 (369)
++++. ..++.|.+||.. +.+..+..... +..+.+ ++++..++.++ .++.|.+||++++
T Consensus 103 l~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------s~dg~~l~~~~~~~~~~i~~~d~~~~- 174 (353)
T 3vgz_A 103 LWFGN-TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA------DDATNTVYISGIGKESVIWVVDGGNI- 174 (353)
T ss_dssp EEEEE-TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE------ETTTTEEEEEEESSSCEEEEEETTTT-
T ss_pred EEEEe-cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE------CCCCCEEEEEecCCCceEEEEcCCCC-
Confidence 55555 778999999975 33333332111 122333 34566666655 4789999999987
Q ss_pred CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccc----cccCceEEEEEcCCCCCEEEEEE
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVH----CSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~----h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
+.+..+... ...+.+++|+|+| .+++++.++.|.+||+.+++.+..+.. + ...+.+++|+| ++++++.++
T Consensus 175 --~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~ 249 (353)
T 3vgz_A 175 --KLKTAIQNT-GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK-EHFFINISLDT-ARQRAFITD 249 (353)
T ss_dssp --EEEEEECCC-CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS-CCCEEEEEEET-TTTEEEEEE
T ss_pred --ceEEEecCC-CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC-CcccceEEECC-CCCEEEEEe
Confidence 677777633 3568899999999 899999999999999999988877653 4 55688999999 999777666
Q ss_pred C-CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEE-EEeCCCcEEEEECCCCcc
Q 017601 304 V-DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLG-GWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 304 ~-D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~-sgs~dg~I~iWd~~~~~~ 359 (369)
. ++.|.+||..+++.+..+..... ..+...++++.++ +...++.|.+||..+++.
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 5 58999999999988887765442 3455577888555 555799999999988763
No 136
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=3e-17 Score=151.18 Aligned_cols=235 Identities=13% Similarity=-0.012 Sum_probs=157.5
Q ss_pred EEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEE
Q 017601 98 IALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVY 177 (369)
Q Consensus 98 l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lw 177 (369)
++++++ ..++++...++.|++||..++.. ...+.... ..+..+++|+|++..++++. ..++.|.+|
T Consensus 5 ~~~~~~----~~~~v~~~~~~~v~~~d~~~~~~-----~~~~~~~~----~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~ 70 (349)
T 1jmx_B 5 PALKAG----HEYMIVTNYPNNLHVVDVASDTV-----YKSCVMPD----KFGPGTAMMAPDNRTAYVLN-NHYGDIYGI 70 (349)
T ss_dssp CCCCTT----CEEEEEEETTTEEEEEETTTTEE-----EEEEECSS----CCSSCEEEECTTSSEEEEEE-TTTTEEEEE
T ss_pred ccccCC----CEEEEEeCCCCeEEEEECCCCcE-----EEEEecCC----CCCCceeEECCCCCEEEEEe-CCCCcEEEE
Confidence 345554 46788888899999999875411 11111111 00123799999665455555 788999999
Q ss_pred eCCc--ceEEEEeee-------CCcceeeeccCCCCCCCCcEEEEEcC------------CeEEEEeCCcccCCceeeee
Q 017601 178 DQDI--HLRTLRTLW-------YPSSLNFVQNLSPVNGGPNMLAVTEG------------CQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 178 d~~~--~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~lla~s~d------------~~v~iwD~~~~~~~~~~~~~ 236 (369)
|... ....+.... .+..+.+ +|++..+++++.+ +.|.+||+.+++..+.+..+
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~------spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAI------SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEE------CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred eCCCCcEEEEEEcccccccccccccceEE------CCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 9853 233332211 1233333 3567677777654 89999999886333444555
Q ss_pred eccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeecccccc---------------------------------
Q 017601 237 CGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSK--------------------------------- 283 (369)
Q Consensus 237 ~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~--------------------------------- 283 (369)
..+ ..+.+++|+|+|.+++++. .|.+||+.+++.+..+..+ .
T Consensus 145 ~~~--~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T 1jmx_B 145 PMP--RQVYLMRAADDGSLYVAGP--DIYKMDVKTGKYTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 219 (349)
T ss_dssp ECC--SSCCCEEECTTSCEEEESS--SEEEECTTTCCEEEEECST-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred cCC--CcccceeECCCCcEEEccC--cEEEEeCCCCceecccccc-ccCCccccCccceeeecCCCcceeEEeeeeeeec
Confidence 555 5688999999994444443 4999999988776655432 1
Q ss_pred -----------------------------------CceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCe
Q 017601 284 -----------------------------------YEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNW 328 (369)
Q Consensus 284 -----------------------------------~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~ 328 (369)
..+.+++|+|.++++++++ ++.|.+||+.+++.+..+......
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~ 297 (349)
T 1jmx_B 220 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY 297 (349)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred CCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc
Confidence 1344566777577888877 899999999999888777644323
Q ss_pred eeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 329 LGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 329 ~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
..+...+++++|++++.++.|++||+++++.
T Consensus 298 ~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 298 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp CEEEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred cceEECCCCCEEEEecCCCeEEEEeccccce
Confidence 4566677888888888899999999988763
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=1.7e-16 Score=145.61 Aligned_cols=227 Identities=7% Similarity=0.032 Sum_probs=154.0
Q ss_pred ceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc--c-eE
Q 017601 108 YMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI--H-LR 184 (369)
Q Consensus 108 ~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~--~-~~ 184 (369)
..++++...++.|.+||..++.. ...+... .... +++|+|++..+++++ ..++.|.+||... . ..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~-----~~~~~~~-----~~~~-~~~~s~dg~~l~~~~-~~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEI-----LNQITLG-----YDFV-DTAITSDCSNVVVTS-DFCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCE-----EEEEECC-----CCEE-EEEECSSSCEEEEEE-STTCEEEEEECSSSSCEEE
T ss_pred CEEEEEecCCCeEEEEeCcccce-----eeeEEcc-----CCcc-eEEEcCCCCEEEEEe-CCCCeEEEEECCCCceeEE
Confidence 46677778889999999875521 1111111 1123 799999665455554 6688999999753 2 33
Q ss_pred EEEeeeCCcc-eeeeccCCCCCCCCcEEEEEcC-C--eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEE-EE
Q 017601 185 TLRTLWYPSS-LNFVQNLSPVNGGPNMLAVTEG-C--QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIA-VA 258 (369)
Q Consensus 185 ~~~~~~~~~~-v~~~~~~~~~~~~~~lla~s~d-~--~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~la-sg 258 (369)
.+.....+.. +.+. |++..+++...+ + +|.+||+.++ +.+..+... ....+++|+|+| +++ +.
T Consensus 78 ~~~~~~~~~~~~~~s------~dg~~l~~~~~~~~~~~i~v~d~~~~---~~~~~~~~~--~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 78 AIQEGQSSMADVDIT------PDDQFAVTVTGLNHPFNMQSYSFLKN---KFISTIPIP--YDAVGIAISPNGNGLILID 146 (331)
T ss_dssp EEEECSSCCCCEEEC------TTSSEEEECCCSSSSCEEEEEETTTT---EEEEEEECC--TTEEEEEECTTSSCEEEEE
T ss_pred ecccCCCCccceEEC------CCCCEEEEecCCCCcccEEEEECCCC---CeEEEEECC--CCccceEECCCCCEEEEEe
Confidence 3333333433 4443 456667743334 2 9999999987 677777665 677999999999 554 45
Q ss_pred eCCCc-EEEEeCCCceee----eeccccccCceEEEEEcCCCCCEEEEE-ECCCeEEEEECcCCce---eEEEEcCCCee
Q 017601 259 GADRT-VTIYDPRRWSAL----SRWVHCSKYEITGLSFSSIDSNYIYVQ-GVDYEVFCGQWRESSK---VFAFRGDSNWL 329 (369)
Q Consensus 259 s~D~~-v~vwD~~~~~~~----~~~~~h~~~~v~~l~~sp~d~~~l~s~-s~D~~i~vwd~~~~~~---~~~~~g~~~~~ 329 (369)
..++. |.+||+.....+ ...... ......++|+| ++++++.+ ..++.|++||+.+++. +..+..+....
T Consensus 147 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 224 (331)
T 3u4y_A 147 RSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPG 224 (331)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCC
T ss_pred cCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCc
Confidence 56688 999998763332 122233 45689999999 99866554 4689999999999887 77776654334
Q ss_pred eeeEcCCCCEEEEEe-CCCcEEEEECCCCcc
Q 017601 330 GFSKCSNRDVLGGWS-DSGSIFVADVVAKEN 359 (369)
Q Consensus 330 ~~~~~~d~~~l~sgs-~dg~I~iWd~~~~~~ 359 (369)
.+...+||++|+.++ .++.|.+||+++++.
T Consensus 225 ~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 566678999766554 578999999988764
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=7e-17 Score=148.14 Aligned_cols=241 Identities=12% Similarity=0.070 Sum_probs=152.8
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
...+ .++|+|++ ..++++...++.|++||..++.. . ...+..+.. ...+++|+|++. .++++ ..+
T Consensus 40 ~~~~-~~~~s~dg---~~l~~~~~~~~~i~~~d~~~~~~--~--~~~~~~~~~-----~~~~~~~s~dg~-~l~~~-~~~ 104 (331)
T 3u4y_A 40 YDFV-DTAITSDC---SNVVVTSDFCQTLVQIETQLEPP--K--VVAIQEGQS-----SMADVDITPDDQ-FAVTV-TGL 104 (331)
T ss_dssp CCEE-EEEECSSS---CEEEEEESTTCEEEEEECSSSSC--E--EEEEEECSS-----CCCCEEECTTSS-EEEEC-CCS
T ss_pred CCcc-eEEEcCCC---CEEEEEeCCCCeEEEEECCCCce--e--EEecccCCC-----CccceEECCCCC-EEEEe-cCC
Confidence 4455 99999984 23444555578999999976521 0 111111111 121399999655 45544 444
Q ss_pred -c--eEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCe-EEEEeCCcccCCce--eeeeeccCCC
Q 017601 172 -K--SIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQ-LTIWDLRMKENGGC--LHRICGSVGD 242 (369)
Q Consensus 172 -~--~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~-v~iwD~~~~~~~~~--~~~~~~~~~~ 242 (369)
+ .|.+||... .++.+.....+..+.+ +|++..+++++ .++. |.+||+........ ...+.. ..
T Consensus 105 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~------spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~--~~ 176 (331)
T 3u4y_A 105 NHPFNMQSYSFLKNKFISTIPIPYDAVGIAI------SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG--GT 176 (331)
T ss_dssp SSSCEEEEEETTTTEEEEEEECCTTEEEEEE------CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS--SS
T ss_pred CCcccEEEEECCCCCeEEEEECCCCccceEE------CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC--CC
Confidence 3 999999853 3333322222333333 35666666654 5578 99999885411000 122222 36
Q ss_pred cEEEEEECCCC-cE-EEEeCCCcEEEEeCCCcee---eeeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCC
Q 017601 243 ILYAVCSSSTG-NI-AVAGADRTVTIYDPRRWSA---LSRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRES 316 (369)
Q Consensus 243 ~v~~v~~sp~g-~l-asgs~D~~v~vwD~~~~~~---~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~ 316 (369)
.+..++|+|+| ++ +++..++.|.+||+++++. +..+..+ ..+..++|+| |+++|+.++ .++.|.+||+.++
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECT-TSSEEEEECSSEEEEEEEETTTT
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECC-CCCEEEEEEcCCCEEEEEECCCC
Confidence 68999999999 55 4555789999999999887 7666644 6678999999 999776654 5789999999987
Q ss_pred ce--eEEEEcC----CCee----eeeEcCCCCEEEEEe-CCCcEEEEECCCCc
Q 017601 317 SK--VFAFRGD----SNWL----GFSKCSNRDVLGGWS-DSGSIFVADVVAKE 358 (369)
Q Consensus 317 ~~--~~~~~g~----~~~~----~~~~~~d~~~l~sgs-~dg~I~iWd~~~~~ 358 (369)
+. +..+..+ .... .+...+|+++|+.++ .++.|.+||+.++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 254 TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred ceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 76 4444333 1111 135567998876554 56799999998764
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=1.3e-16 Score=147.67 Aligned_cols=250 Identities=9% Similarity=0.028 Sum_probs=152.0
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEec---CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDS---YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~---~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
..+......++|+||+ . +++.+. ++.|++|++..+.... ...+..+. ....+++|+|++. .++
T Consensus 36 ~~~~~~p~~~a~spdg----~-l~~~~~~~~~~~v~~~~~~~g~~~~---~~~~~~~~-----~~p~~~a~spdg~-~l~ 101 (347)
T 3hfq_A 36 LAATQNPTYLALSAKD----C-LYSVDKEDDEGGIAAWQIDGQTAHK---LNTVVAPG-----TPPAYVAVDEARQ-LVY 101 (347)
T ss_dssp EEECSCCCCEEECTTC----E-EEEEEEETTEEEEEEEEEETTEEEE---EEEEEEES-----CCCSEEEEETTTT-EEE
T ss_pred eeccCCcceEEEccCC----e-EEEEEecCCCceEEEEEecCCcEEE---eeeeecCC-----CCCEEEEECCCCC-EEE
Confidence 3455677889999984 4 444333 6899999996441100 00111111 1234799999655 455
Q ss_pred EEecccceEEEEeCCc--ceEEEEeeeCC----------cceeeeccCCCCCCCCcEEEE-EcCCeEEEEeCCcccCCce
Q 017601 166 VARSFSKSIDVYDQDI--HLRTLRTLWYP----------SSLNFVQNLSPVNGGPNMLAV-TEGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~--~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~lla~-s~d~~v~iwD~~~~~~~~~ 232 (369)
++...+++|.+||... ....+...... ..+..+. ++|++. ++++ ..++.|.+||+........
T Consensus 102 ~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 102 SANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTD---LTPDNR-LAVIDLGSDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEE---ECTTSC-EEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEE---ECCCCc-EEEEeCCCCEEEEEEECCCCcEEE
Confidence 5535789999999741 22222222111 0122222 345666 5444 4578999999983211112
Q ss_pred eeeeeccCCCcEEEEEECCCC-cEEE-EeCCCcEEEEeCCC--cee--eeecccccc------CceEEEEEcCCCCCEE-
Q 017601 233 LHRICGSVGDILYAVCSSSTG-NIAV-AGADRTVTIYDPRR--WSA--LSRWVHCSK------YEITGLSFSSIDSNYI- 299 (369)
Q Consensus 233 ~~~~~~~~~~~v~~v~~sp~g-~las-gs~D~~v~vwD~~~--~~~--~~~~~~h~~------~~v~~l~~sp~d~~~l- 299 (369)
+..+....+..+..++|+|+| ++++ +..++.|.+||+.. ++. +..+... . ..+..++|+| ||++|
T Consensus 178 ~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~i~~sp-dG~~l~ 255 (347)
T 3hfq_A 178 QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI-PADYTAHNGAAAIRLSH-DGHFLY 255 (347)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS-CTTCCSCCEEEEEEECT-TSCEEE
T ss_pred eeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec-CCCCCCCCcceeEEECC-CCCEEE
Confidence 222232213567889999999 5555 56789999999874 432 2233222 1 3588999999 99977
Q ss_pred EEEECCCeEEEEECcC---CceeEEEEcCCC-eeeeeEcCCCCEEEEEeCC-CcEEEE--ECCCCc
Q 017601 300 YVQGVDYEVFCGQWRE---SSKVFAFRGDSN-WLGFSKCSNRDVLGGWSDS-GSIFVA--DVVAKE 358 (369)
Q Consensus 300 ~s~s~D~~i~vwd~~~---~~~~~~~~g~~~-~~~~~~~~d~~~l~sgs~d-g~I~iW--d~~~~~ 358 (369)
++...++.|.+||+.. .+.+..+..+.. ...+...+||++|++++.+ +.|.+| |.++++
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 5566789999999973 244555554331 1356667899988877764 899999 555554
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=1.7e-17 Score=169.12 Aligned_cols=241 Identities=10% Similarity=0.022 Sum_probs=161.6
Q ss_pred cceeeEEEEeecCCCCceEEEEEec-CC-----cEEEEEecCCCCCCccccccccCCC----------CC-------CCC
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDS-YG-----HLIVSKLDTSGKDVDRLTYSVLPQD----------CG-------VGE 148 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~-~g-----~v~~~~~~~~~~~~~~~~~~~~~~~----------~~-------~~~ 148 (369)
...|.+++||||+ ..|++++. ++ .|++||+.++... . ........ .. .+.
T Consensus 36 ~~~~~~~~~SpdG----~~la~~~~~d~~~~~~~i~~~d~~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAPDG----SRVTFLRGKDSDRNQLDLWSYDIGSGQTR-L--LVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECTTS----SEEEEEECCSSCTTEEEEEEEETTTCCEE-E--EECGGGTC--------------------CC
T ss_pred CCCCCCceEecCC----CEEEEEeccCCCCcccEEEEEECCCCcee-E--ccchhhcccccccccchhhhhhhhhhhccc
Confidence 4568999999984 67777776 77 8999998765210 0 00000000 00 000
Q ss_pred CCeeEEEECCCCceeEEEEecccceEEEEeCCcc----eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeC
Q 017601 149 GSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH----LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDL 224 (369)
Q Consensus 149 ~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~ 224 (369)
.++.+++|+|++ ..++++ +. ++|.+||.... .+.+. .+...+.... ++||+..|+.++ ++.|.+||+
T Consensus 109 ~~v~~~~~SpDg-~~l~~~-~~-~~i~~~d~~~~~~~~~~~l~--~~~~~~~~~~---~SPDG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFP-LG-GELYLYDLKQEGKAAVRQLT--HGEGFATDAK---LSPKGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp EESCCCEECTTS-SEEEEE-ET-TEEEEEESSSCSTTSCCBCC--CSSSCEEEEE---ECTTSSEEEEEE-TTEEEEEET
T ss_pred cCcceeEECCCC-CEEEEE-eC-CcEEEEECCCCCcceEEEcc--cCCccccccc---CCCCCCEEEEEe-CCcEEEEec
Confidence 124579999955 456665 33 89999997532 33222 2223333444 346666666665 569999999
Q ss_pred CcccCCceeeeeeccCCCc----------------EEEEEECCCC-cEEEEeCCC-------------------------
Q 017601 225 RMKENGGCLHRICGSVGDI----------------LYAVCSSSTG-NIAVAGADR------------------------- 262 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~----------------v~~v~~sp~g-~lasgs~D~------------------------- 262 (369)
.++ +.......+ ... +.+++||||| +|++++.|+
T Consensus 180 ~~g---~~~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 180 ASG---RQMQLTADG-STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp TTT---EEEECCCCC-CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred CCC---CEEEeccCC-ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 876 444333222 121 4779999999 899888766
Q ss_pred --------cEEEEeCCC-ceeeeecc--ccccCceEEEEEcCCCCCEEEEEEC-----CCeEEEEECcCCceeEEEEcCC
Q 017601 263 --------TVTIYDPRR-WSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGV-----DYEVFCGQWRESSKVFAFRGDS 326 (369)
Q Consensus 263 --------~v~vwD~~~-~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~-----D~~i~vwd~~~~~~~~~~~g~~ 326 (369)
.|.+||+.+ ++...... .| ...+.+++| | ||++|+.++. +..|++||+.++++...+..+.
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 332 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQ-DIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETS 332 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCS-SEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCc-ceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCC
Confidence 789999988 77654433 46 788999999 9 9999997764 5689999999998877776554
Q ss_pred -Ce----eeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 327 -NW----LGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 327 -~~----~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
.| ..+..++||+++++++.||.+++|.+.
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 12 244557799999999999988888765
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=2.2e-17 Score=164.03 Aligned_cols=229 Identities=12% Similarity=-0.032 Sum_probs=156.6
Q ss_pred cceeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
...|++++|+||+ ..||.++. +|++.+|+++.+. ...+..+. ...+.+++|+|+ .+++++ +.
T Consensus 21 ~~~~~~~~~~~DG----~~la~~s~~~g~~~lw~~~~g~------~~~lt~~~----~~~~~~~~~spd--~~l~~~-~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDG----DKLLVVGFSEGSVNAYLYDGGE------TVKLNREP----INSVLDPHYGVG--RVILVR-DV 83 (582)
T ss_dssp HSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTE------EEECCSSC----CSEECEECTTCS--EEEEEE-EC
T ss_pred ccchheeecCCCC----CeEEEEEccCCceeEEEEcCCC------cEeeeccc----ccccccccCCCC--eEEEEe-cc
Confidence 4679999999995 57776655 8999999985431 11222111 123457999995 555555 33
Q ss_pred ---cceEEEE--eC--CcceEEEEeeeCCcceeeeccCCCCCCCCc-EEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 171 ---SKSIDVY--DQ--DIHLRTLRTLWYPSSLNFVQNLSPVNGGPN-MLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 171 ---d~~i~lw--d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
+...+|| +. ......+..........+. +++.. +++.+.++.+.|||+.++ +......++ .
T Consensus 84 ~~g~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s------~dg~~~~~~s~~~~~~~l~d~~~g---~~~~l~~~~--~ 152 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGV------DTGEAVVFTGATEDRVALYALDGG---GLRELARLP--G 152 (582)
T ss_dssp STTSCCEEEEEEETTSTTCCEECTTSCSBEEEEEE------ECSSCEEEEEECSSCEEEEEEETT---EEEEEEEES--S
T ss_pred CCCCcceEEEEEeccCCCccccccCCCCceeeeeC------CCCCeEEEEecCCCCceEEEccCC---cEEEeecCC--C
Confidence 4556665 44 3222222111111222222 34443 444445555669999877 444433343 3
Q ss_pred cEEEEEECCCC-cEEEEeCC----CcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCC--eEEEEECcC
Q 017601 243 ILYAVCSSSTG-NIAVAGAD----RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY--EVFCGQWRE 315 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D----~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~--~i~vwd~~~ 315 (369)
.+++||||| +||+++.| +.|++||+.+++.. .+..| ...+.+++||| ||+.|+++..|+ .|++||+.+
T Consensus 153 --~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~-~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSG-EGSFSSASISP-GMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCS-SCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTT
T ss_pred --ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecC-CCccccceECC-CCCEEEEccCCCeeEEEEEcCCC
Confidence 889999999 88888777 78999999887654 67788 88899999999 999999888888 899999999
Q ss_pred CceeEEEEcCCCe-eeee--------EcCCCCEEEEEeCCCcEEEEEC
Q 017601 316 SSKVFAFRGDSNW-LGFS--------KCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 316 ~~~~~~~~g~~~~-~~~~--------~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
++.. .+.+|... ..+. .++||.++++++.|+++++|++
T Consensus 228 ~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8877 66666521 1233 5779999999999999999999
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=2.5e-17 Score=158.04 Aligned_cols=211 Identities=11% Similarity=0.020 Sum_probs=138.0
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCC--C-c--cccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKD--V-D--RLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~--~-~--~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
...++.|++++++ .++++++.+| +.+|+....... . . .......+...-.....+.+++|+|++ .++|+
T Consensus 36 ~~~~n~lavs~~~----~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav 109 (434)
T 2oit_A 36 KERSSLLAVSNKY----GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSA 109 (434)
T ss_dssp CSCCBCEEEETTT----TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEE
T ss_pred CCCccEEEEecCC----CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEE
Confidence 3468999999874 5777777777 888876421100 0 0 000000000000012347789999965 56663
Q ss_pred ---EecccceEEEEeCCcc----------eEEEEeee-CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCce
Q 017601 167 ---ARSFSKSIDVYDQDIH----------LRTLRTLW-YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 167 ---~~s~d~~i~lwd~~~~----------~~~~~~~~-~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~ 232 (369)
+++.|++|+|||.... +..+.... |...+..+.+.|. ++..|++++.|++|+|||++++ ..
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~--~~~~las~s~Dg~v~iwD~~~~---~~ 184 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT--VPSMVAVCLADGSIAVLQVTET---VK 184 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS--CTTEEEEEETTSCEEEEEESSS---EE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC--CCCEEEEEECCCeEEEEEcCCC---cc
Confidence 3489999999997432 11223222 3455666665432 1457888999999999999987 55
Q ss_pred eeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc------cCceEEEEEcCCCCCEEEEE-EC
Q 017601 233 LHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS------KYEITGLSFSSIDSNYIYVQ-GV 304 (369)
Q Consensus 233 ~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~------~~~v~~l~~sp~d~~~l~s~-s~ 304 (369)
+.....+ ...|++++|+|+| +|++|+.||+|++||++ ++....+..|. ...|.+++|++ ++.++++. +.
T Consensus 185 ~~~~~~~-~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~ 261 (434)
T 2oit_A 185 VCATLPS-TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAA 261 (434)
T ss_dssp EEEEECG-GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEET
T ss_pred eeeccCC-CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccC
Confidence 5444444 4789999999999 99999999999999998 55555544330 33899999999 87777553 34
Q ss_pred CC------eEEEEECcCC
Q 017601 305 DY------EVFCGQWRES 316 (369)
Q Consensus 305 D~------~i~vwd~~~~ 316 (369)
|+ .+++||+++.
T Consensus 262 dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 262 DGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCSSSCCEEEEEECCCT
T ss_pred CCccCCCCceEEEEeccC
Confidence 43 3899999863
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=9.1e-16 Score=141.58 Aligned_cols=237 Identities=11% Similarity=-0.015 Sum_probs=158.1
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCC--CCCCCeeEEEECCCCceeEEEEe
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCG--VGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
+...+..++|+|++ ..+.++...++.|++||..++.. + ........... .......+++|+|++..++++..
T Consensus 87 ~~~~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 87 NDLKPFGATINNTT---QTLWFGNTVNSAVTAIDAKTGEV-K--GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp ESSCCCSEEEETTT---TEEEEEETTTTEEEEEETTTCCE-E--EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred cCCCcceEEECCCC---CEEEEEecCCCEEEEEeCCCCee-E--EEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 34557889999984 34556666678999999875521 0 11111100000 00011357999997665544442
Q ss_pred cccceEEEEeCCcc--eEEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeecc---CCC
Q 017601 169 SFSKSIDVYDQDIH--LRTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGS---VGD 242 (369)
Q Consensus 169 s~d~~i~lwd~~~~--~~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~---~~~ 242 (369)
+.++.|.+||.... ...+. ....+..+.+. +++..+++++.++.|.+||+.++ +.+..+... ...
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s------~dg~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD------SEGKRLYTTNADGELITIDTADN---KILSRKKLLDDGKEH 231 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE------TTTTEEEEECTTSEEEEEETTTT---EEEEEEECCCSSSCC
T ss_pred CCCceEEEEcCCCCceEEEecCCCCccceEEEC------CCCCEEEEEcCCCeEEEEECCCC---eEEEEEEcCCCCCCc
Confidence 45889999998633 33332 11123444443 46777888888999999999988 666655531 035
Q ss_pred cEEEEEECCCC-cEEEEe-CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCCcee
Q 017601 243 ILYAVCSSSTG-NIAVAG-ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRESSKV 319 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs-~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~~~~ 319 (369)
.+.+++|+|+| .+++++ .++.|.+||+.+++.+..+... . ...++|+| ++++++.++ .++.|.+||..+++.+
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~--~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-E--SLAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS-S--CCCEEEET-TTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-C--CceEEECC-CCCEEEEEECCCCeEEEEECCCCeEE
Confidence 68889999999 565555 4599999999999888877754 3 26799999 998665555 6899999999999988
Q ss_pred EEEEcCCCeeeeeEcCCCCEEEEEeCC
Q 017601 320 FAFRGDSNWLGFSKCSNRDVLGGWSDS 346 (369)
Q Consensus 320 ~~~~g~~~~~~~~~~~d~~~l~sgs~d 346 (369)
..+........+...+|+++|+.+..+
T Consensus 308 ~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 308 KTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 888765533455567788876666555
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.76 E-value=4e-16 Score=143.13 Aligned_cols=232 Identities=14% Similarity=0.070 Sum_probs=144.7
Q ss_pred eEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCC---cceEE
Q 017601 109 MVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQD---IHLRT 185 (369)
Q Consensus 109 ~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~---~~~~~ 185 (369)
.++++...++.|++|+++.... ... ...+ ++. ....+++|+|++. .++++...++.|.+|+++ .....
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~-~~~-~~~~-~~~-----~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~ 76 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGA-LTL-TQVV-DVP-----GQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGALTF 76 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSC-EEE-EEEE-ECS-----SCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCc-EEE-eeeE-ecC-----CCCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCceee
Confidence 4555557789999999964211 100 0111 111 1234699999655 455552445999999875 12222
Q ss_pred EEeeeCCcceeeeccCCCCCCCCcEEEEEc-CCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe-CCC
Q 017601 186 LRTLWYPSSLNFVQNLSPVNGGPNMLAVTE-GCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG-ADR 262 (369)
Q Consensus 186 ~~~~~~~~~v~~~~~~~~~~~~~~lla~s~-d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs-~D~ 262 (369)
+........+..+. +++++..+++++. ++.|.+||+..+.....+..+... ..+.+++|+|+| .+++++ .++
T Consensus 77 ~~~~~~~~~~~~~~---~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~ 151 (343)
T 1ri6_A 77 AAESALPGSLTHIS---TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL--DGCHSANISPDNRTLWVPALKQD 151 (343)
T ss_dssp EEEEECSSCCSEEE---ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC--TTBCCCEECTTSSEEEEEEGGGT
T ss_pred ccccccCCCCcEEE---EcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC--CCceEEEECCCCCEEEEecCCCC
Confidence 32222222222222 2355666766654 889999999422111455555554 678999999999 777776 899
Q ss_pred cEEEEeCCC-ceeee----eccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcC--Cce--eEEEE----cCC--
Q 017601 263 TVTIYDPRR-WSALS----RWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRE--SSK--VFAFR----GDS-- 326 (369)
Q Consensus 263 ~v~vwD~~~-~~~~~----~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~--~~~--~~~~~----g~~-- 326 (369)
.|.+||+.+ ++... .+..+....+..++|+| ++++++.++ .++.|++||+.. ++. ...+. ++.
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred EEEEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 999999987 54432 23333145788999999 999776555 789999999954 332 23332 111
Q ss_pred -CeeeeeEcCCCCEEE-EEeCCCcEEEEECC
Q 017601 327 -NWLGFSKCSNRDVLG-GWSDSGSIFVADVV 355 (369)
Q Consensus 327 -~~~~~~~~~d~~~l~-sgs~dg~I~iWd~~ 355 (369)
....+...+++++|+ +...++.|++||+.
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 112355577888776 56689999999998
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.75 E-value=5.8e-17 Score=164.68 Aligned_cols=240 Identities=10% Similarity=-0.029 Sum_probs=155.9
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc--
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF-- 170 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~-- 170 (369)
..+.+++|+||+ .++++ +.+|.|++||+.++.. ...+..+... ...+.+++|||++ ..++++ +.
T Consensus 17 ~~~~~~~~spdg----~~~~~-~~dg~i~~~d~~~g~~-----~~~~~~~~~~--~~~v~~~~~SpDg-~~l~~~-~~~~ 82 (723)
T 1xfd_A 17 IHDPEAKWISDT----EFIYR-EQKGTVRLWNVETNTS-----TVLIEGKKIE--SLRAIRYEISPDR-EYALFS-YNVE 82 (723)
T ss_dssp CCCCCCCBSSSS----CBCCC-CSSSCEEEBCGGGCCC-----EEEECTTTTT--TTTCSEEEECTTS-SEEEEE-ESCC
T ss_pred ccccccEEcCCC----cEEEE-eCCCCEEEEECCCCcE-----EEEecccccc--ccccceEEECCCC-CEEEEE-ecCc
Confidence 457789999985 45555 7889999999986621 1112222110 0124589999955 456665 33
Q ss_pred -------cceEEEEeCCcc-eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 171 -------SKSIDVYDQDIH-LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 171 -------d~~i~lwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
++.+.+||.... .+.+..... .-..+....++||+..|+.++. +.|++||+.++ +..+....+ ..
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g---~~~~~~~~~-~~ 155 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEV--SNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGK---QAIRVVSTG-KE 155 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCCEECCCTTC--CSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSS---CCEEEECCC-BT
T ss_pred cceeecceeeEEEEECCCCceEeccCCcc--ccccccccEECCCCCEEEEEEC-CeEEEEECCCC---ceEEEecCC-CC
Confidence 378889997632 222322111 1011222335677777777765 79999999887 444433322 12
Q ss_pred ------------------cEEEEEECCCC-cEEEEeCCC----------------------------------cEEEEeC
Q 017601 243 ------------------ILYAVCSSSTG-NIAVAGADR----------------------------------TVTIYDP 269 (369)
Q Consensus 243 ------------------~v~~v~~sp~g-~lasgs~D~----------------------------------~v~vwD~ 269 (369)
.+.+++||||| .|++++.|+ +|++||+
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence 23789999999 888887553 7999999
Q ss_pred CCceeeeecccc-----ccCceEEEEEcCCCCCEEEEEEC----CCeEEEEECcCCceeEEEEc-CCCee-----eeeEc
Q 017601 270 RRWSALSRWVHC-----SKYEITGLSFSSIDSNYIYVQGV----DYEVFCGQWRESSKVFAFRG-DSNWL-----GFSKC 334 (369)
Q Consensus 270 ~~~~~~~~~~~h-----~~~~v~~l~~sp~d~~~l~s~s~----D~~i~vwd~~~~~~~~~~~g-~~~~~-----~~~~~ 334 (369)
.+++....+..+ ....+.+++||| ||++|++.+. +..|++||+.++++...+.. +..|. .+..+
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 314 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFS 314 (723)
T ss_dssp SSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEEC
T ss_pred CCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEc
Confidence 988765555543 046789999999 9998877653 35899999999887776644 33331 34557
Q ss_pred CCCCEEEE--EeCCC------cEEEEEC
Q 017601 335 SNRDVLGG--WSDSG------SIFVADV 354 (369)
Q Consensus 335 ~d~~~l~s--gs~dg------~I~iWd~ 354 (369)
+||+.|+. ...++ .|++||+
T Consensus 315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~ 342 (723)
T 1xfd_A 315 KDGRKFFFIRAIPQGGRGKFYHITVSSS 342 (723)
T ss_dssp TTSCSEEEEEEECCSSSSCEEEEEEECS
T ss_pred CCCCeEEEEEecccCCCcceeEEEEEec
Confidence 79986664 55677 5777883
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=1.6e-15 Score=153.79 Aligned_cols=249 Identities=11% Similarity=0.076 Sum_probs=158.7
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecC-----CCCCCccccccccCCCCCCC---------CCCeeEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDT-----SGKDVDRLTYSVLPQDCGVG---------EGSWSGL 154 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~l 154 (369)
..|.+.+.+++||||+ ..++.. .+++|++|++.+ +.. . .........+. .....++
T Consensus 117 ~~~~~~~~~~~~SpdG----~~la~~-~~~~i~v~~~~~~~~~~g~~-~----~~~~~~~~~~~~g~~~~~ee~~~~~~~ 186 (706)
T 2z3z_A 117 FDTNEETASLDFSPVG----DRVAYV-RNHNLYIARGGKLGEGMSRA-I----AVTIDGTETLVYGQAVHQREFGIEKGT 186 (706)
T ss_dssp ECCTTCCTTCEECTTS----SEEEEE-ETTEEEEEECBCTTSCCCCC-E----ESCSCCBTTEEESSCCGGGCTTCCCSE
T ss_pred cCCcccccCCcCCCCC----CEEEEE-ECCeEEEEecCcccccCCCc-E----EeccCCCCCeEcccchhhhhcCCCceE
Confidence 3456778999999985 466664 568999999986 321 0 00000000000 0012479
Q ss_pred EECCCCceeEEEEec---------------------------------ccceEEEEeCCcce-EEEEee-eCCcceeeec
Q 017601 155 CFSPSQWSMAAVARS---------------------------------FSKSIDVYDQDIHL-RTLRTL-WYPSSLNFVQ 199 (369)
Q Consensus 155 ~~~p~~~~~~a~~~s---------------------------------~d~~i~lwd~~~~~-~~~~~~-~~~~~v~~~~ 199 (369)
+|+|++ ..|+++ + .+..|.+||..... ..+... .+...+..+.
T Consensus 187 ~~SpDg-~~la~~-~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 264 (706)
T 2z3z_A 187 FWSPKG-SCLAFY-RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLS 264 (706)
T ss_dssp EECTTS-SEEEEE-EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEE
T ss_pred EECCCC-CEEEEE-EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEE
Confidence 999955 466666 3 45789999986432 222111 1222333333
Q ss_pred cCCCCCCCCcEEEEEcCC-----eEEEEeCCcccCCceeeeee-ccCCC---cEEEEEECC--CC-cEEEEeCCCcEEEE
Q 017601 200 NLSPVNGGPNMLAVTEGC-----QLTIWDLRMKENGGCLHRIC-GSVGD---ILYAVCSSS--TG-NIAVAGADRTVTIY 267 (369)
Q Consensus 200 ~~~~~~~~~~lla~s~d~-----~v~iwD~~~~~~~~~~~~~~-~~~~~---~v~~v~~sp--~g-~lasgs~D~~v~vw 267 (369)
++||+..+++++.++ +|.+||+.++ +....+. ..... .+.+++|+| +| ++++++.|+.++||
T Consensus 265 ---~spdg~~l~~~~~~~~~~~~~v~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 265 ---WSPDENILYVAEVNRAQNECKVNAYDAETG---RFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp ---ECTTSSEEEEEEECTTSCEEEEEEEETTTC---CEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred ---EECCCCEEEEEEeCCCCCeeEEEEEECCCC---ceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 345677788777665 8999999887 3333322 11012 246789999 99 88999999999999
Q ss_pred eCC-CceeeeeccccccCceEE-EEEcCCCCCEEEEEECC-C----eEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEE
Q 017601 268 DPR-RWSALSRWVHCSKYEITG-LSFSSIDSNYIYVQGVD-Y----EVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVL 340 (369)
Q Consensus 268 D~~-~~~~~~~~~~h~~~~v~~-l~~sp~d~~~l~s~s~D-~----~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l 340 (369)
++. ++..+..+..| ...+.+ ++|+| +++.|+.++.+ + .|..||+.+++. ..+........+..++||++|
T Consensus 339 ~~~~~~~~~~~l~~~-~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~spdg~~l 415 (706)
T 2z3z_A 339 LYDTTGRLIRQVTKG-EWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGKT-KDLTPESGMHRTQLSPDGSAI 415 (706)
T ss_dssp EEETTSCEEEECCCS-SSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCCC-EESCCSSSEEEEEECTTSSEE
T ss_pred EEECCCCEEEecCCC-CeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCCc-eeccCCCceEEEEECCCCCEE
Confidence 886 57777888888 788887 79999 99887766554 3 677777766552 333222223445557899987
Q ss_pred EEEeCC----CcEEEEECCCCc
Q 017601 341 GGWSDS----GSIFVADVVAKE 358 (369)
Q Consensus 341 ~sgs~d----g~I~iWd~~~~~ 358 (369)
+..+.+ +.|++||+.+++
T Consensus 416 ~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 416 IDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEECSSCSCEEEEEESSSCE
T ss_pred EEEecCCCCCcEEEEEECCCCe
Confidence 766443 569999998775
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=2.9e-16 Score=140.41 Aligned_cols=224 Identities=14% Similarity=0.017 Sum_probs=146.0
Q ss_pred EEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCCc-ce-EEEEeee
Q 017601 113 SVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HL-RTLRTLW 190 (369)
Q Consensus 113 s~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~-~~~~~~~ 190 (369)
+.+.++.|++||+.++.. ..+..+ ...+.+++|+|++ ..++++ + ++.|.+||... .. ..+....
T Consensus 17 ~~~~~~~i~~~d~~~~~~------~~~~~~-----~~~v~~~~~spdg-~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM------RVVWQT-----PELFEAPNWSPDG-KYLLLN-S-EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp -CCCCEEEEEEETTTTEE------EEEEEE-----SSCCEEEEECTTS-SEEEEE-E-TTEEEEEESSSCCSCEECCCTT
T ss_pred CCCcceeEEEEeCCCCce------eeeccC-----CcceEeeEECCCC-CEEEEE-c-CCeEEEEeCCCCCCceEecccc
Confidence 345678999999875411 111112 1235689999954 466666 3 78999999765 22 2111111
Q ss_pred CCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEE-EEeCCCcEEE
Q 017601 191 YPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIA-VAGADRTVTI 266 (369)
Q Consensus 191 ~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~la-sgs~D~~v~v 266 (369)
....+..+. ++|++..+++++ .++..+||++.... .....+... ..+++++|+|++ .|+ +++.|+.++|
T Consensus 83 ~~~~~~~~~---~spdg~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 83 ATICNNDHG---ISPDGALYAISDKVEFGKSAIYLLPSTG--GTPRLMTKN--LPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp CCCBCSCCE---ECTTSSEEEEEECTTTSSCEEEEEETTC--CCCEECCSS--SSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred ccccccceE---ECCCCCEEEEEEeCCCCcceEEEEECCC--CceEEeecC--CCccceEECCCCCEEEEEECCCCceEE
Confidence 112222222 345677788777 34455555543221 234445554 568999999999 665 7888999999
Q ss_pred EeCCC-ceeeeeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECc-CCceeEEEEcCCCe-eeeeEcCCCCEEEE
Q 017601 267 YDPRR-WSALSRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWR-ESSKVFAFRGDSNW-LGFSKCSNRDVLGG 342 (369)
Q Consensus 267 wD~~~-~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~-~~~~~~~~~g~~~~-~~~~~~~d~~~l~s 342 (369)
|++.. ......+..| ...+.++.|+| ++++|+.++ .|+.+++|++. .+.....+..|... ..+...+++++|+.
T Consensus 156 ~~~~~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 156 YSMDIDSGVETRLTHG-EGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp EEEETTTCCEEECCCS-SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred EEEECCCCcceEcccC-CCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEE
Confidence 99643 3345566777 78899999999 999888766 58999999987 45556666665511 22334679999988
Q ss_pred EeCC-----------CcEEEEECCCCcc
Q 017601 343 WSDS-----------GSIFVADVVAKEN 359 (369)
Q Consensus 343 gs~d-----------g~I~iWd~~~~~~ 359 (369)
++.+ +.|++||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred EEcCCCCCcccccCceEEEEEecCCCCc
Confidence 8876 5699999988753
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=2.2e-16 Score=160.95 Aligned_cols=239 Identities=9% Similarity=-0.076 Sum_probs=156.0
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
..|.+++||||+ ..|+.++. +.|++||+.++... ....+..+ ...+..++|+|++ ..+|.+ + ++
T Consensus 109 ~~v~~~~~SpDg----~~l~~~~~-~~i~~~d~~~~~~~---~~~~l~~~-----~~~~~~~~~SPDG-~~la~~-~-~~ 172 (741)
T 2ecf_A 109 TGIVDYQWSPDA----QRLLFPLG-GELYLYDLKQEGKA---AVRQLTHG-----EGFATDAKLSPKG-GFVSFI-R-GR 172 (741)
T ss_dssp EESCCCEECTTS----SEEEEEET-TEEEEEESSSCSTT---SCCBCCCS-----SSCEEEEEECTTS-SEEEEE-E-TT
T ss_pred cCcceeEECCCC----CEEEEEeC-CcEEEEECCCCCcc---eEEEcccC-----CcccccccCCCCC-CEEEEE-e-CC
Confidence 568999999985 56666655 89999999754100 01112111 1235689999955 456666 3 56
Q ss_pred eEEEEeCCcc-eEEEEeeeCCccee-------------eeccCCCCCCCCcEEEEEcCC---------------------
Q 017601 173 SIDVYDQDIH-LRTLRTLWYPSSLN-------------FVQNLSPVNGGPNMLAVTEGC--------------------- 217 (369)
Q Consensus 173 ~i~lwd~~~~-~~~~~~~~~~~~v~-------------~~~~~~~~~~~~~lla~s~d~--------------------- 217 (369)
.|.+||.... ...+... +...+. ......++||+..|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp EEEEEETTTTEEEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred cEEEEecCCCCEEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 8999998642 2222111 111000 001122456788888887665
Q ss_pred ------------eEEEEeCCc-ccCCceeeeee--ccCCCcEEEEEECCCC-cEEEEeC-----CCcEEEEeCCCceeee
Q 017601 218 ------------QLTIWDLRM-KENGGCLHRIC--GSVGDILYAVCSSSTG-NIAVAGA-----DRTVTIYDPRRWSALS 276 (369)
Q Consensus 218 ------------~v~iwD~~~-~~~~~~~~~~~--~~~~~~v~~v~~sp~g-~lasgs~-----D~~v~vwD~~~~~~~~ 276 (369)
.|.+||+.+ + +...... .+ ...+.+++| ||| .|++++. +..|.+||+.+++...
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~-~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~ 326 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQA---QTQWIDLGKEQ-DIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV 326 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTC---CCEEECCCSCS-SEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE
T ss_pred ecCCCCCCCCeeEEEEEECCCCC---ceEEecCCCCc-ceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE
Confidence 889999988 6 4333221 12 477999999 999 7776553 5689999999988877
Q ss_pred eccccccC----ceEEEEEcCCCCCEEEEEECCCeEEEEECc-CCceeEEEEcCCC-eeee-eEcCCCCEE-EEEeCCC-
Q 017601 277 RWVHCSKY----EITGLSFSSIDSNYIYVQGVDYEVFCGQWR-ESSKVFAFRGDSN-WLGF-SKCSNRDVL-GGWSDSG- 347 (369)
Q Consensus 277 ~~~~h~~~----~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~-~~~~~~~~~g~~~-~~~~-~~~~d~~~l-~sgs~dg- 347 (369)
.+..+ .. .+.+++|+| |++++++++.|+.++||.+. .+. ...+..+.. ...+ ..++|++.| ++++.++
T Consensus 327 ~~~~~-~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~ 403 (741)
T 2ecf_A 327 LAHET-SPTWVPLHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESA 403 (741)
T ss_dssp EEEEE-CSSCCCCCSCCEECT-TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCT
T ss_pred EEEcC-CCCcCCcCCceEECC-CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCC
Confidence 77666 43 456899999 99999999999988888776 344 566655542 1233 246788866 4566666
Q ss_pred -cEEEEECCC
Q 017601 348 -SIFVADVVA 356 (369)
Q Consensus 348 -~I~iWd~~~ 356 (369)
.+++|++..
T Consensus 404 ~~~~l~~~~~ 413 (741)
T 2ecf_A 404 RESQIYAVPL 413 (741)
T ss_dssp TCBEEEEEET
T ss_pred ceEEEEEEEc
Confidence 899999865
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=2.4e-16 Score=156.50 Aligned_cols=231 Identities=13% Similarity=-0.007 Sum_probs=153.8
Q ss_pred CCcc-ceeeEEEEeecCCCCceEEEEEec---CCcEEEEEecC--CCCCCccccccccCCCCCCCCCCeeEEEECCCCce
Q 017601 89 CPHR-SEVQSIALAETDSSGYMVLGSVDS---YGHLIVSKLDT--SGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS 162 (369)
Q Consensus 89 ~~H~-~~V~~l~~s~~~~~~~~~las~d~---~g~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 162 (369)
..|. ..|.+++|+|| .++++.+. +....+|.+.. ... ...+... .+....+|+|++..
T Consensus 60 t~~~~~~~~~~~~spd-----~~l~~~~~~~g~~~~~l~~~~~~~~g~-----~~~l~~~------~~~~~~~~s~dg~~ 123 (582)
T 3o4h_A 60 NREPINSVLDPHYGVG-----RVILVRDVSKGAEQHALFKVNTSRPGE-----EQRLEAV------KPMRILSGVDTGEA 123 (582)
T ss_dssp CSSCCSEECEECTTCS-----EEEEEEECSTTSCCEEEEEEETTSTTC-----CEECTTS------CSBEEEEEEECSSC
T ss_pred ecccccccccccCCCC-----eEEEEeccCCCCcceEEEEEeccCCCc-----cccccCC------CCceeeeeCCCCCe
Confidence 3454 68999999986 46776664 44455555543 211 1111111 12234688887665
Q ss_pred eEEEEecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC----CeEEEEeCCcccCCceeeeee
Q 017601 163 MAAVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG----CQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d----~~v~iwD~~~~~~~~~~~~~~ 237 (369)
+++++.+.++ +.|||... ..+.+... ....+.+ +|||..+++++.+ .+|.+||+.++ +. ..+.
T Consensus 124 ~~~~s~~~~~-~~l~d~~~g~~~~l~~~-~~~~~~~------spDG~~la~~~~~~~~~~~i~~~d~~~g---~~-~~l~ 191 (582)
T 3o4h_A 124 VVFTGATEDR-VALYALDGGGLRELARL-PGFGFVS------DIRGDLIAGLGFFGGGRVSLFTSNLSSG---GL-RVFD 191 (582)
T ss_dssp EEEEEECSSC-EEEEEEETTEEEEEEEE-SSCEEEE------EEETTEEEEEEEEETTEEEEEEEETTTC---CC-EEEC
T ss_pred EEEEecCCCC-ceEEEccCCcEEEeecC-CCceEEE------CCCCCEEEEEEEcCCCCeEEEEEcCCCC---Cc-eEee
Confidence 5555524444 45998753 22222221 2223333 3577788877766 78999999887 33 3454
Q ss_pred ccCCCcEEEEEECCCC-cEEEEeCCC--cEEEEeCCCceeeeeccccccCceEEEE--------EcCCCCCEEEEEECCC
Q 017601 238 GSVGDILYAVCSSSTG-NIAVAGADR--TVTIYDPRRWSALSRWVHCSKYEITGLS--------FSSIDSNYIYVQGVDY 306 (369)
Q Consensus 238 ~~~~~~v~~v~~sp~g-~lasgs~D~--~v~vwD~~~~~~~~~~~~h~~~~v~~l~--------~sp~d~~~l~s~s~D~ 306 (369)
.+ ...+.+++||||| .|+++..++ .|++||+.+++.. .+.+| ...+..++ |+| ||.++++++.|+
T Consensus 192 ~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g 267 (582)
T 3o4h_A 192 SG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP-SKDFSSYRPTAITWLGYLP-DGRLAVVARREG 267 (582)
T ss_dssp CS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS-CSHHHHHCCSEEEEEEECT-TSCEEEEEEETT
T ss_pred cC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC-CcChhhhhhccccceeEcC-CCcEEEEEEcCC
Confidence 44 4778999999999 888888888 8999999998877 77788 77777777 999 999999999999
Q ss_pred eEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCC---cEEEEECCC
Q 017601 307 EVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSG---SIFVADVVA 356 (369)
Q Consensus 307 ~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg---~I~iWd~~~ 356 (369)
++++|++ ++......+.. ..+..+ ++.++++++.+. .+++||..+
T Consensus 268 ~~~l~~~--g~~~~~~~~~v--~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 268 RSAVFID--GERVEAPQGNH--GRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEET--TEEECCCSSEE--EEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred cEEEEEE--CCeeccCCCce--EEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999999 55544322221 344445 889999888874 477777653
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=2.9e-16 Score=159.50 Aligned_cols=241 Identities=10% Similarity=-0.043 Sum_probs=148.3
Q ss_pred eeeEEEEeecCCCCceEEEEEec---------CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 94 EVQSIALAETDSSGYMVLGSVDS---------YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~---------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
.|.+++||||+ ..|+++.. ++.+++||+.++.. ..+.... .....+..++|||++ ..+
T Consensus 62 ~v~~~~~SpDg----~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~l~~~~--~~~~~~~~~~~SPdG-~~l 128 (723)
T 1xfd_A 62 RAIRYEISPDR----EYALFSYNVEPIYQHSYTGYYVLSKIPHGDP------QSLDPPE--VSNAKLQYAGWGPKG-QQL 128 (723)
T ss_dssp TCSEEEECTTS----SEEEEEESCCCCSSSCCCSEEEEEESSSCCC------EECCCTT--CCSCCCSBCCBCSST-TCE
T ss_pred ccceEEECCCC----CEEEEEecCccceeecceeeEEEEECCCCce------EeccCCc--cccccccccEECCCC-CEE
Confidence 49999999985 55665544 37899999986521 1111110 001113468999955 456
Q ss_pred EEEecccceEEEEeCCc-ceEEEEeeeCCcce------------------eeeccCCCCCCCCcEEEEEcCC--------
Q 017601 165 AVARSFSKSIDVYDQDI-HLRTLRTLWYPSSL------------------NFVQNLSPVNGGPNMLAVTEGC-------- 217 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~~lla~s~d~-------- 217 (369)
|.+ + ++.|.+||... ....+... +...+ ..+. ++||+..|++++.|+
T Consensus 129 a~~-~-~~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~---~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 129 IFI-F-ENNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHW---WSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp EEE-E-TTEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEE---ECTTSSEEEEEEEECTTSCEEEE
T ss_pred EEE-E-CCeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEE---ECCCCCEEEEEEECCCccceEEe
Confidence 665 3 37899999753 22222111 11111 1222 346777888877543
Q ss_pred --------------------------eEEEEeCCcccCCceeeeeecc-----CCCcEEEEEECCCC-cEEEEeC----C
Q 017601 218 --------------------------QLTIWDLRMKENGGCLHRICGS-----VGDILYAVCSSSTG-NIAVAGA----D 261 (369)
Q Consensus 218 --------------------------~v~iwD~~~~~~~~~~~~~~~~-----~~~~v~~v~~sp~g-~lasgs~----D 261 (369)
+|++||+.++ +....+..+ ....+.+++||||| +|++.+. +
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~---~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 279 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP---THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNV 279 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS---CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC---ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCe
Confidence 7999999887 443444321 03578999999999 7766543 3
Q ss_pred CcEEEEeCCCceeeeeccccccCce----EEEEEcCCCCCEEEE--EECCC------eEEEEEC-cCCc--eeEEEE-cC
Q 017601 262 RTVTIYDPRRWSALSRWVHCSKYEI----TGLSFSSIDSNYIYV--QGVDY------EVFCGQW-RESS--KVFAFR-GD 325 (369)
Q Consensus 262 ~~v~vwD~~~~~~~~~~~~h~~~~v----~~l~~sp~d~~~l~s--~s~D~------~i~vwd~-~~~~--~~~~~~-g~ 325 (369)
..|.+||+.+++....+..+....+ ..++||| ||+.|+. +..|+ .|.+||+ ..++ +...+. ++
T Consensus 280 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 280 SILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD 358 (723)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred EEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence 5799999999887766554313444 3889999 9997765 45677 5667773 4443 134443 33
Q ss_pred CCeee-eeEcCCCCEEEEEeCC---CcEEEEECCCC
Q 017601 326 SNWLG-FSKCSNRDVLGGWSDS---GSIFVADVVAK 357 (369)
Q Consensus 326 ~~~~~-~~~~~d~~~l~sgs~d---g~I~iWd~~~~ 357 (369)
..... +..++||+.|+..+.+ +.+++|++...
T Consensus 359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 32222 2457799988765554 88999998653
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=7.2e-15 Score=136.69 Aligned_cols=250 Identities=14% Similarity=0.019 Sum_probs=150.5
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecC----CcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSY----GHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~----g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
|......++|+||+ ..|++++.+ +.+.+|+++.....+.. ......+ ......+++ ++. .+++
T Consensus 48 ~~~~p~~l~~spdg----~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~-~~~~~~~-----~~~p~~~~~--dg~-~l~~ 114 (361)
T 3scy_A 48 EVANPSYLIPSADG----KFVYSVNEFSKDQAAVSAFAFDKEKGTLHL-LNTQKTM-----GADPCYLTT--NGK-NIVT 114 (361)
T ss_dssp ECSCCCSEEECTTS----SEEEEEECCSSTTCEEEEEEEETTTTEEEE-EEEEECS-----SSCEEEEEE--CSS-EEEE
T ss_pred cCCCCceEEECCCC----CEEEEEEccCCCCCcEEEEEEeCCCCcEEE-eeEeccC-----CCCcEEEEE--CCC-EEEE
Confidence 66777889999984 566666553 79999998754111110 0011100 112345777 344 4555
Q ss_pred EecccceEEEEeCCc--ceEEEE-eeeC----C-------cceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccC--
Q 017601 167 ARSFSKSIDVYDQDI--HLRTLR-TLWY----P-------SSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKEN-- 229 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~--~~~~~~-~~~~----~-------~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~-- 229 (369)
+...+++|.+|+... .+..+. ...+ + ..+..+. ++|++..++++. .++.|.+|++.....
T Consensus 115 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 115 ANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR---ITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE---ECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE---ECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 536789999999742 111110 0000 0 0111122 345666666655 478999999875521
Q ss_pred ----Ccee---eeeeccCCCcEEEEEECCCC-cEEEEe-CCCcEEEEeCCCcee--eeec---cccccCceEEEEEcCCC
Q 017601 230 ----GGCL---HRICGSVGDILYAVCSSSTG-NIAVAG-ADRTVTIYDPRRWSA--LSRW---VHCSKYEITGLSFSSID 295 (369)
Q Consensus 230 ----~~~~---~~~~~~~~~~v~~v~~sp~g-~lasgs-~D~~v~vwD~~~~~~--~~~~---~~h~~~~v~~l~~sp~d 295 (369)
.... ..........+..++|+|+| ++++++ .++.|.+||+.+++. +..+ ..+ ......++|+| |
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~-~~~~~~i~~sp-d 269 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN-AQGSGDIHLSP-D 269 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC-CCCEEEEEECT-T
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC-CCCcccEEECC-C
Confidence 0000 12221113668899999999 676666 699999999987644 2222 333 45578999999 9
Q ss_pred CCEEEEEECC--CeEEEEECc--CCc--eeEEEEcCCCeeeeeEcCCCCEEEEEe-CCCcEEEEE--CCCCc
Q 017601 296 SNYIYVQGVD--YEVFCGQWR--ESS--KVFAFRGDSNWLGFSKCSNRDVLGGWS-DSGSIFVAD--VVAKE 358 (369)
Q Consensus 296 ~~~l~s~s~D--~~i~vwd~~--~~~--~~~~~~g~~~~~~~~~~~d~~~l~sgs-~dg~I~iWd--~~~~~ 358 (369)
+++|+++..+ ++|.+|++. +++ .+..+........+...+||++|+.++ .++.|.+|+ .++++
T Consensus 270 g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 270 GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 9998776654 899999996 344 334444311114566678999888877 679999964 44554
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=1.6e-15 Score=160.72 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=169.1
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
.+|.+.+.++.|+++ .++++.+.+|.+.+|.++..... ...+..+. .+...+|+|++ ..++.+
T Consensus 200 ~~~~~~v~~~~~s~d-----~l~~~~~~dg~~~l~~~~~~g~~----~~~l~~~~------~~~~~~~SpDG-~~la~~- 262 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-----RIYFITDIDGFGQIYSTDLDGKD----LRKHTSFT------DYYPRHLNTDG-RRILFS- 262 (1045)
T ss_dssp ECCSSCCEEEEEETT-----EEEEEECTTSSCEEEEEETTSCS----CEECCCCC------SSCEEEEEESS-SCEEEE-
T ss_pred cCCCCcccceEEeCC-----EEEEEEeccCceEEEEEeCCCCc----ceEecCCC------CcceeeEcCCC-CEEEEE-
Confidence 689999999999876 46667777788888877643211 11122111 23367999954 456665
Q ss_pred cccceEEEEeCCc-ceEEEEeee---------CCcceeeeccCCCC-CCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 169 SFSKSIDVYDQDI-HLRTLRTLW---------YPSSLNFVQNLSPV-NGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 169 s~d~~i~lwd~~~-~~~~~~~~~---------~~~~v~~~~~~~~~-~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
.++.|.+||... .+..+.... +...+..+. ++ ||+..+++++ ++.+.+||+..+ ... .+.
T Consensus 263 -~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~---~S~pdG~~la~~~-~~~i~~~~~~~~---~~~-~~~ 333 (1045)
T 1k32_A 263 -KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAED---FSPLDGDLIAFVS-RGQAFIQDVSGT---YVL-KVP 333 (1045)
T ss_dssp -ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEE---EEECGGGCEEEEE-TTEEEEECTTSS---BEE-ECS
T ss_pred -eCCEEEEecCCceEeeeeccCcccccccccccccccceee---ecCCCCCEEEEEE-cCEEEEEcCCCC---ceE-Ecc
Confidence 488999999742 222211100 001122222 34 5566676666 889999999876 333 343
Q ss_pred ccCCC-cEEEEEECCCC-cEEEEeCCCcEE-EEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECc
Q 017601 238 GSVGD-ILYAVCSSSTG-NIAVAGADRTVT-IYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWR 314 (369)
Q Consensus 238 ~~~~~-~v~~v~~sp~g-~lasgs~D~~v~-vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~ 314 (369)
.+ .. .+.+++|+ +| .|+.++.+..+. +||+.+++.. .+.+| ...+..++||| |+++|++++.|+.|++||+.
T Consensus 334 ~~-~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~-~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 334 EP-LRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEEN-LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp CC-SCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCC-CCSEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred CC-CcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCC-ccceeeeEECC-CCCEEEEECCCCeEEEEECC
Confidence 33 35 89999999 99 899988888888 9998876554 44477 88999999999 99999999999999999999
Q ss_pred CCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCCC----------cEEEEECCCCc
Q 017601 315 ESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDSG----------SIFVADVVAKE 358 (369)
Q Consensus 315 ~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg----------~I~iWd~~~~~ 358 (369)
+++....+.+|... ..+..++||++|++++.++ .|++||+.+++
T Consensus 409 tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 409 TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 99888888777632 3455688999998887654 99999998875
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=1.2e-15 Score=154.81 Aligned_cols=190 Identities=14% Similarity=0.000 Sum_probs=132.1
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCcc-eEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCc--
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH-LRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRM-- 226 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~-- 226 (369)
++.+++|+|+ . .++.+ .+++|.+||.... ...+ ..+...+..+. ++||+..|++ +.|+.|.+||+.+
T Consensus 83 ~v~~~~~spd-~-~~~~~--~~~~i~~~d~~~~~~~~l--~~~~~~~~~~~---~SpdG~~la~-~~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 83 PSFRTLDAGR-G-LVVLF--TQGGLVGFDMLARKVTYL--FDTNEETASLD---FSPVGDRVAY-VRNHNLYIARGGKLG 152 (706)
T ss_dssp CCEEEEETTT-T-EEEEE--ETTEEEEEETTTTEEEEE--ECCTTCCTTCE---ECTTSSEEEE-EETTEEEEEECBCTT
T ss_pred CceeEEECCC-C-eEEEE--ECCEEEEEECCCCceEEc--cCCcccccCCc---CCCCCCEEEE-EECCeEEEEecCccc
Confidence 4668999996 4 44444 3599999998643 2222 22222222222 3466666666 5789999999987
Q ss_pred ---ccCCceeeeeeccCCCc--------------EEEEEECCCC-cEEEEe-----------------------------
Q 017601 227 ---KENGGCLHRICGSVGDI--------------LYAVCSSSTG-NIAVAG----------------------------- 259 (369)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~--------------v~~v~~sp~g-~lasgs----------------------------- 259 (369)
+ +........ ... +.+++||||| +|++++
T Consensus 153 ~~~g---~~~~~~~~~-~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 153 EGMS---RAIAVTIDG-TETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp SCCC---CCEESCSCC-BTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred ccCC---CcEEeccCC-CCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 6 443322222 122 4789999999 888887
Q ss_pred ----CCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEEECCC-----eEEEEECcCC-ceeEEEE-cCC
Q 017601 260 ----ADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGVDY-----EVFCGQWRES-SKVFAFR-GDS 326 (369)
Q Consensus 260 ----~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~D~-----~i~vwd~~~~-~~~~~~~-g~~ 326 (369)
.+..|.+||+.+++...... .| ...+.+++|+| |++.|++++.|+ .|++||+.++ .....+. .+.
T Consensus 229 g~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp TSCCCEEEEEEEETTTTEEEECCCCSCT-TCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred CCCCCeeEEEEEECCCCceEeeccCCCC-ceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC
Confidence 45789999999887654432 46 67899999999 999999988876 9999999998 4433332 222
Q ss_pred Cee----eeeEcC--CCCEEEEEeCCCcEEEEECC
Q 017601 327 NWL----GFSKCS--NRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 327 ~~~----~~~~~~--d~~~l~sgs~dg~I~iWd~~ 355 (369)
.|. .+..++ ||++|++++.|+.+++|++.
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 222 345578 99999999999999999876
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=1.7e-15 Score=160.61 Aligned_cols=235 Identities=13% Similarity=-0.016 Sum_probs=165.8
Q ss_pred eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCC------CCCCCeeEEEEC-CCCceeEEE
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCG------VGEGSWSGLCFS-PSQWSMAAV 166 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~-p~~~~~~a~ 166 (369)
.+...+|+||+ ..++.. .++.|++|++... .+. .+..+... .....+.+++|+ |+ +..+++
T Consensus 246 ~~~~~~~SpDG----~~la~~-~~~~i~~~d~~~~--~l~----~l~~~~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~ 313 (1045)
T 1k32_A 246 DYYPRHLNTDG----RRILFS-KGGSIYIFNPDTE--KIE----KIEIGDLESPEDRIISIPSKFAEDFSPLD-GDLIAF 313 (1045)
T ss_dssp SSCEEEEEESS----SCEEEE-ETTEEEEECTTTC--CEE----ECCCCCCCBCCSEEEECGGGGEEEEEECG-GGCEEE
T ss_pred CcceeeEcCCC----CEEEEE-eCCEEEEecCCce--Eee----eeccCcccccccccccccccceeeecCCC-CCEEEE
Confidence 57788999985 445554 4789999998322 111 11110000 001135589999 95 456666
Q ss_pred EecccceEEEEeCCcc-eEEEEeeeCCc-ceeeeccCCCCCCCCcEEEEEcCCeEE-EEeCCcccCCceeeeeeccCCCc
Q 017601 167 ARSFSKSIDVYDQDIH-LRTLRTLWYPS-SLNFVQNLSPVNGGPNMLAVTEGCQLT-IWDLRMKENGGCLHRICGSVGDI 243 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~-~~~~~~~~~~~-~v~~~~~~~~~~~~~~lla~s~d~~v~-iwD~~~~~~~~~~~~~~~~~~~~ 243 (369)
+ + ++.|.+|+.... ...+ ..+.. .+..+. ++ ++..++.++++..+. +||+.++ .. ..+..+ ...
T Consensus 314 ~-~-~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~---~s-dg~~l~~~s~~~~l~~~~d~~~~---~~-~~l~~~-~~~ 380 (1045)
T 1k32_A 314 V-S-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRG---GD-TKVAFIHGTREGDFLGIYDYRTG---KA-EKFEEN-LGN 380 (1045)
T ss_dssp E-E-TTEEEEECTTSSBEEEC--SCCSCEEEEEEC---SS-SEEEEEEEETTEEEEEEEETTTC---CE-EECCCC-CCS
T ss_pred E-E-cCEEEEEcCCCCceEEc--cCCCcceEEeee---Ec-CCCeEEEEECCCceEEEEECCCC---Cc-eEecCC-ccc
Confidence 6 3 789999997532 2222 22333 334444 34 567888888888888 9998876 33 333343 578
Q ss_pred EEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCC----------eEEEEE
Q 017601 244 LYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY----------EVFCGQ 312 (369)
Q Consensus 244 v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~----------~i~vwd 312 (369)
+.+++|+||| +|++++.++.|++||+.+++....+.+| ...+.+++||| ||++|++++.++ .|++||
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC-CCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEE
Confidence 9999999999 9999999999999999999888777788 88999999999 999999887754 999999
Q ss_pred CcCCceeEEEEcCCCe-eeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 313 WRESSKVFAFRGDSNW-LGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 313 ~~~~~~~~~~~g~~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
+.+++ ...+.+|... ..+..++||+.|+.++.++...+|+...
T Consensus 459 ~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 459 MEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp TTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 99876 5555555421 2344577999999999999888887654
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=6.5e-15 Score=134.65 Aligned_cols=207 Identities=12% Similarity=0.085 Sum_probs=136.8
Q ss_pred eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec----
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS---- 169 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s---- 169 (369)
.+..++|+|++ ..++++...++.|++||+.++.. . ....... .. .......+++|+|++. .++++..
T Consensus 35 ~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~-~--~~~~~~~-~~-~~~~~~~~~~~s~dg~-~l~~~~~~~~~ 105 (337)
T 1pby_B 35 TPMVPMVAPGG---RIAYATVNKSESLVKIDLVTGET-L--GRIDLST-PE-ERVKSLFGAALSPDGK-TLAIYESPVRL 105 (337)
T ss_dssp CCCCEEECTTS---SEEEEEETTTTEEEEEETTTCCE-E--EEEECCB-TT-EEEECTTCEEECTTSS-EEEEEEEEEEE
T ss_pred CccceEEcCCC---CEEEEEeCCCCeEEEEECCCCCe-E--eeEEcCC-cc-cccccccceEECCCCC-EEEEEeccccc
Confidence 47889999984 34556666778999999875421 1 0111110 00 0000123699999654 4555411
Q ss_pred -------ccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC
Q 017601 170 -------FSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV 240 (369)
Q Consensus 170 -------~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~ 240 (369)
.++.|.+||... ..+.+.....+..+.+ +|++..++++ ++.|.+||+.++ +.+..+....
T Consensus 106 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~------s~dg~~l~~~--~~~i~~~d~~~~---~~~~~~~~~~ 174 (337)
T 1pby_B 106 ELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAW------ARDGSKLYGL--GRDLHVMDPEAG---TLVEDKPIQS 174 (337)
T ss_dssp CSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEE------CTTSSCEEEE--SSSEEEEETTTT---EEEEEECSTT
T ss_pred ccccccccCceEEEEECCCCcEEEEEeCCCCcceeEE------CCCCCEEEEe--CCeEEEEECCCC---cEeeeeeccc
Confidence 468999999863 3333332223334433 3456566665 678999998765 3322221110
Q ss_pred -----------------------------------------------------------------CCcEEEEEECCCC-c
Q 017601 241 -----------------------------------------------------------------GDILYAVCSSSTG-N 254 (369)
Q Consensus 241 -----------------------------------------------------------------~~~v~~v~~sp~g-~ 254 (369)
...+++++|+|+| +
T Consensus 175 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 254 (337)
T 1pby_B 175 WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR 254 (337)
T ss_dssp TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE
Confidence 1235679999999 7
Q ss_pred EEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 255 IAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 255 lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
++++ ++.|.+||+.+++.+..+..+ ..+.+++|+| ++++|++++.|+.|++||+.+++.+..+..+
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 7777 799999999999888777644 4678999999 9999999999999999999999888888654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=2.6e-15 Score=152.59 Aligned_cols=236 Identities=11% Similarity=0.061 Sum_probs=146.5
Q ss_pred EEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec-------
Q 017601 97 SIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS------- 169 (369)
Q Consensus 97 ~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s------- 169 (369)
+++|+|++ .++++ +.+++|++||+.++.. ...+..+.. .+.++.+++|||++ ..++.+..
T Consensus 20 ~~~~s~dg----~~~~~-~~d~~i~~~~~~~g~~-----~~~~~~~~~--~~~~~~~~~~SpDg-~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQ----EYLHQ-SADNNIVLYNIETGQS-----YTILSNRTM--KSVNASNYGLSPDR-QFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSS----EEEEE-CTTSCEEEEESSSCCE-----EEEECHHHH--HTTTCSEEEECTTS-SEEEEEEEEEECSSS
T ss_pred ccEECCCC----eEEEE-cCCCCEEEEEcCCCcE-----EEEEccccc--cccceeeEEECCCC-CeEEEEecCceeEEe
Confidence 78999984 45554 4589999999986521 111111100 00123479999955 45666522
Q ss_pred -ccceEEEEeCCcceEE--EEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee-eccCCCcE-
Q 017601 170 -FSKSIDVYDQDIHLRT--LRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI-CGSVGDIL- 244 (369)
Q Consensus 170 -~d~~i~lwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~-~~~~~~~v- 244 (369)
.+++|.+||....... .... ..+.... ++||+..|+.+ .++.|++||+.++ +..+.. .++ ...|
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~---~SPDG~~la~~-~~~~i~~~~~~~g---~~~~l~~~~~-~~~v~ 155 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELP---RPIQYLC---WSPVGSKLAYV-YQNNIYLKQRPGD---PPFQITFNGR-ENKIF 155 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCC---SSBCCEE---ECSSTTCEEEE-ETTEEEEESSTTS---CCEECCCCCB-TTTEE
T ss_pred ecceEEEEEECCCCccccceecC---cccccce---ECCCCCEEEEE-ECCeEEEEeCCCC---CcEEEecCCC-cCCeE
Confidence 2689999998643210 1111 1122222 34677777766 4789999999887 433222 121 1222
Q ss_pred ----------------EEEEECCCC-cEEEEeCCC----------------------------------cEEEEeCCCce
Q 017601 245 ----------------YAVCSSSTG-NIAVAGADR----------------------------------TVTIYDPRRWS 273 (369)
Q Consensus 245 ----------------~~v~~sp~g-~lasgs~D~----------------------------------~v~vwD~~~~~ 273 (369)
.+++||||| .||+++.|. .|++||+.+++
T Consensus 156 ~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~ 235 (719)
T 1z68_A 156 NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA 235 (719)
T ss_dssp ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH
T ss_pred cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC
Confidence 489999999 888887652 78899999876
Q ss_pred ee--------eeccccccCceEEEEEcCCCCCEEEEEECC----CeEEEEE----CcCCceeEEE----EcCCCeee---
Q 017601 274 AL--------SRWVHCSKYEITGLSFSSIDSNYIYVQGVD----YEVFCGQ----WRESSKVFAF----RGDSNWLG--- 330 (369)
Q Consensus 274 ~~--------~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D----~~i~vwd----~~~~~~~~~~----~g~~~~~~--- 330 (369)
.. ..+.+| ...+.+++||| |++++++.... ..|.+|| +.++++...+ .+|..|..
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (719)
T 1z68_A 236 YVGPQEVPVPAMIASS-DYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFF 313 (719)
T ss_dssp HHCCEECCCCHHHHTS-CEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSS
T ss_pred ccceeEccCCccCCCC-cceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEcccc
Confidence 53 234567 88899999999 88777764432 2488899 7776655444 46664432
Q ss_pred ---eeEcCCCCEEE--EEeCCC--cEEEEECCCCc
Q 017601 331 ---FSKCSNRDVLG--GWSDSG--SIFVADVVAKE 358 (369)
Q Consensus 331 ---~~~~~d~~~l~--sgs~dg--~I~iWd~~~~~ 358 (369)
...++||+.|+ +...+| .|++||+.+++
T Consensus 314 ~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 314 VSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 34467888554 344555 57777876654
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.64 E-value=1.5e-14 Score=132.96 Aligned_cols=208 Identities=13% Similarity=0.107 Sum_probs=134.4
Q ss_pred eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCcccccccc-CCCCCCCCCCeeEEEECCCCceeEEEEecc--
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVL-PQDCGVGEGSWSGLCFSPSQWSMAAVARSF-- 170 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~-- 170 (369)
.+..++|+|++ ..+.++...++.|++||+.++.. ...+. ++..........+++|+|++. .++++ +.
T Consensus 44 ~~~~~~~s~dg---~~~~v~~~~~~~i~~~d~~t~~~-----~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~-~~~~ 113 (349)
T 1jmx_B 44 GPGTAMMAPDN---RTAYVLNNHYGDIYGIDLDTCKN-----TFHANLSSVPGEVGRSMYSFAISPDGK-EVYAT-VNPT 113 (349)
T ss_dssp SSCEEEECTTS---SEEEEEETTTTEEEEEETTTTEE-----EEEEESCCSTTEEEECSSCEEECTTSS-EEEEE-EEEE
T ss_pred CCceeEECCCC---CEEEEEeCCCCcEEEEeCCCCcE-----EEEEEcccccccccccccceEECCCCC-EEEEE-cccc
Confidence 56789999984 34555666788999999875411 11111 110000001123699999654 55665 33
Q ss_pred ----------cceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 171 ----------SKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 171 ----------d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
++.|.+||... ..+.+.....+..+..+. +++++. +++++ +.|.+||++++ +.+..+..
T Consensus 114 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---~s~dg~-l~~~~--~~i~~~d~~~~---~~~~~~~~ 184 (349)
T 1jmx_B 114 QRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMR---AADDGS-LYVAG--PDIYKMDVKTG---KYTVALPL 184 (349)
T ss_dssp EECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEE---ECTTSC-EEEES--SSEEEECTTTC---CEEEEECS
T ss_pred cccccccccCCCeEEEEECCCccccceeeeccCCCccccee---ECCCCc-EEEcc--CcEEEEeCCCC---ceeccccc
Confidence 38999999753 122222333333333222 235565 55543 44999999877 44443321
Q ss_pred cC-------------------------------------------------------------------CCcEEEEEECC
Q 017601 239 SV-------------------------------------------------------------------GDILYAVCSSS 251 (369)
Q Consensus 239 ~~-------------------------------------------------------------------~~~v~~v~~sp 251 (369)
.. ...+.+++|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 264 (349)
T 1jmx_B 185 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSP 264 (349)
T ss_dssp TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECS
T ss_pred cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecC
Confidence 10 01456778889
Q ss_pred -CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC
Q 017601 252 -TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 252 -~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~ 325 (369)
+| +++++ ++.|.+||+++++.+..+... ..+.+++|+| ++++|++++.++.|++||+++++.+..+...
T Consensus 265 ~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~-dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 265 KDPNQIYGV--LNRLAKYDLKQRKLIKAANLD--HTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SCTTEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECS-SSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEE--cCeEEEEECccCeEEEEEcCC--CCccceEECC-CCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99 77777 889999999999888777643 4578999999 9998888888999999999999888887544
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=7.9e-14 Score=130.23 Aligned_cols=244 Identities=7% Similarity=-0.055 Sum_probs=148.2
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEec-CCCCCCccccccccCCCCCCCCCCeeEEEECCCCce-eEEEEec-
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLD-TSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS-MAAVARS- 169 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~-~~a~~~s- 169 (369)
..+..++|+|++ ..|++++.+ .+.+|++. ++ . +.. ....... +...+++|+|++.. +++++ .
T Consensus 40 ~~~~~~a~spdg----~~l~~~~~~-~v~~~~~~~~g-~-~~~-~~~~~~~------g~~~~~~~spdg~~l~~~~~-~~ 104 (365)
T 1jof_A 40 EPISWMTFDHER----KNIYGAAMK-KWSSFAVKSPT-E-IVH-EASHPIG------GHPRANDADTNTRAIFLLAA-KQ 104 (365)
T ss_dssp CCCSEEEECTTS----SEEEEEEBT-EEEEEEEEETT-E-EEE-EEEEECC------SSGGGGCTTSCCEEEEEEEC-SS
T ss_pred CCCcEEEECCCC----CEEEEEccc-eEEEEEECCCC-C-EEE-eeEeecC------CCCccEEECCCCCEEEEEEe-cC
Confidence 457789999984 566666666 89999986 33 1 100 0011000 11235899996654 34444 3
Q ss_pred ------------ccceEEEEeCC---cceEEEEeee--CCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCC-cccCC
Q 017601 170 ------------FSKSIDVYDQD---IHLRTLRTLW--YPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLR-MKENG 230 (369)
Q Consensus 170 ------------~d~~i~lwd~~---~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~-~~~~~ 230 (369)
.++++.+|++. .....+.... +...+..+. ++||+..++++. .+++|++||+. +++ .
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~spdG~~l~~~~~~~~~v~~~~~~~~g~-~ 180 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMV---FDPTETYLYSADLTANKLWTHRKLASGE-V 180 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEE---ECTTSSEEEEEETTTTEEEEEEECTTSC-E
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEE---ECCCCCEEEEEcCCCCEEEEEEECCCCC-E
Confidence 58899999874 2222333221 112222332 345666666554 36799999998 552 1
Q ss_pred ceeeeeecc-CCCcEEEEEECCCC-cEEEEeC-CCcEEEEeCC--Cceee------eecc----ccccC------ceEEE
Q 017601 231 GCLHRICGS-VGDILYAVCSSSTG-NIAVAGA-DRTVTIYDPR--RWSAL------SRWV----HCSKY------EITGL 289 (369)
Q Consensus 231 ~~~~~~~~~-~~~~v~~v~~sp~g-~lasgs~-D~~v~vwD~~--~~~~~------~~~~----~h~~~------~v~~l 289 (369)
..+..+... .+..+..++|+|+| ++++++. +++|.+|++. +++.. ..+. +| .. .+..+
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i 259 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR-DPETGKGLYRADV 259 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB-CTTTSSBSEEEEE
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc-ccccccccccccE
Confidence 122334311 03668999999999 7777664 7899999765 45432 2222 22 22 58899
Q ss_pred E-EcCCCCCEEEEEECC-C-----eEEEEECc-CCceeE---EEEcCC-CeeeeeEcC---CCCEEEEEeCC-CcEEEEE
Q 017601 290 S-FSSIDSNYIYVQGVD-Y-----EVFCGQWR-ESSKVF---AFRGDS-NWLGFSKCS---NRDVLGGWSDS-GSIFVAD 353 (369)
Q Consensus 290 ~-~sp~d~~~l~s~s~D-~-----~i~vwd~~-~~~~~~---~~~g~~-~~~~~~~~~---d~~~l~sgs~d-g~I~iWd 353 (369)
+ |+| ||++|+++..+ . +|.+|++. +++... ....+. ....+...| ||++|++++.+ +.|.+|+
T Consensus 260 ~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 260 CALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred EEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 9 999 99998876643 2 89999996 555443 132221 112344456 79999998875 9999999
Q ss_pred CCCC
Q 017601 354 VVAK 357 (369)
Q Consensus 354 ~~~~ 357 (369)
+...
T Consensus 339 ~~~~ 342 (365)
T 1jof_A 339 WKDE 342 (365)
T ss_dssp EETT
T ss_pred Echh
Confidence 8654
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=1.1e-12 Score=117.86 Aligned_cols=245 Identities=10% Similarity=0.088 Sum_probs=155.1
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
+|-....+|++++++ .+.++...++.|.+|+.+.. . ...+........ ......++++.+.+..++++..+
T Consensus 27 g~~~~p~~v~~~~~g----~l~v~~~~~~~i~~~d~~g~--~--~~~~~~~~~~~~-~~~~p~~i~~~~~~g~l~v~~~~ 97 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN----DIIVADTNNHRIQIFDKEGR--F--KFQFGECGKRDS-QLLYPNRVAVVRNSGDIIVTERS 97 (286)
T ss_dssp TCBSCEEEEEECTTC----CEEEEEGGGTEEEEECTTSC--E--EEEECCBSSSTT-CBSSEEEEEEETTTTEEEEEECG
T ss_pred CccCCCceEEECCCC----CEEEEECCCCEEEEECCCCc--E--EEEecccCCCcc-cccCceEEEEEcCCCeEEEEcCC
Confidence 445678899998873 46666667789999986522 0 111111000000 01124579994335555555423
Q ss_pred ccceEEEEeCCcc-eEEEEee--eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeecc-CCCcEE
Q 017601 170 FSKSIDVYDQDIH-LRTLRTL--WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGS-VGDILY 245 (369)
Q Consensus 170 ~d~~i~lwd~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~-~~~~v~ 245 (369)
.++.|.+||.... +..+... ..+..+.+ ++++..+++...++.|.+||.. + +.+..+... ....++
T Consensus 98 ~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~------~~~g~l~v~~~~~~~i~~~~~~-g---~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 98 PTHQIQIYNQYGQFVRKFGATILQHPRGVTV------DNKGRIIVVECKVMRVIIFDQN-G---NVLHKFGCSKHLEFPN 167 (286)
T ss_dssp GGCEEEEECTTSCEEEEECTTTCSCEEEEEE------CTTSCEEEEETTTTEEEEECTT-S---CEEEEEECTTTCSSEE
T ss_pred CCCEEEEECCCCcEEEEecCccCCCceEEEE------eCCCCEEEEECCCCEEEEEcCC-C---CEEEEeCCCCccCCcE
Confidence 3889999996432 2222111 12222322 3455555555568899999964 3 455555321 135689
Q ss_pred EEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc-cCceEEEEEcCCCCCEEEEEECCC-eEEEEECcCCceeEEE
Q 017601 246 AVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS-KYEITGLSFSSIDSNYIYVQGVDY-EVFCGQWRESSKVFAF 322 (369)
Q Consensus 246 ~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~-~~~v~~l~~sp~d~~~l~s~s~D~-~i~vwd~~~~~~~~~~ 322 (369)
+++++|+| ++++...++.|++||. +++.+..+..+- ...+.+++++| +++++++...++ .|.+||. .++.+..+
T Consensus 168 ~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISAL 244 (286)
T ss_dssp EEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEE
Confidence 99999999 7777778999999997 455555554320 35789999999 999999888886 9999995 45666666
Q ss_pred EcCCC---eeeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 323 RGDSN---WLGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 323 ~g~~~---~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
..+.. ..++...++|.++++ +.|+.|++|+....
T Consensus 245 ~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 245 ESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred cccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 55431 234555678887777 67999999998653
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.63 E-value=5.7e-14 Score=129.75 Aligned_cols=219 Identities=11% Similarity=-0.005 Sum_probs=134.1
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEe-cCCcEEEEEecCCCCCCccccccccCCC--CCCCCCCeeEEEECCCCceeEE
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVD-SYGHLIVSKLDTSGKDVDRLTYSVLPQD--CGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d-~~g~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~~a 165 (369)
..|...+..++|+|++ ..|++.+ .++.+.+|++.................. .........+++|+|++. +++
T Consensus 82 ~~~~~~p~~~a~spdg----~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v 156 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEAR----QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAV 156 (347)
T ss_dssp EEESCCCSEEEEETTT----TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEE
T ss_pred ecCCCCCEEEEECCCC----CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEE
Confidence 3466788999999984 4555555 6789999999643110000001000000 000111245799999766 655
Q ss_pred EEecccceEEEEeCC--cceEEEEeee-CC-cceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCc--ccCCceeeeeec
Q 017601 166 VARSFSKSIDVYDQD--IHLRTLRTLW-YP-SSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRM--KENGGCLHRICG 238 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~--~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~--~~~~~~~~~~~~ 238 (369)
+. ..++.|.+||.. .......... .. .....+. ++||+..+++++ .++.+.+||+.. ++ ...+..+..
T Consensus 157 ~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~---~spdg~~l~v~~~~~~~v~v~~~~~~~g~-~~~~~~~~~ 231 (347)
T 3hfq_A 157 ID-LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV---FSPDGQYAFLAGELSSQIASLKYDTQTGA-FTQLGIVKT 231 (347)
T ss_dssp EE-TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE---ECTTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEES
T ss_pred Ee-CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE---ECCCCCEEEEEeCCCCEEEEEEecCCCCc-eEEeeeeee
Confidence 55 778899999976 2222221111 11 1122222 345666566544 578999999874 31 112223322
Q ss_pred cC-----CCcEEEEEECCCC-cE-EEEeCCCcEEEEeCCC---ceeeeeccccccCceEEEEEcCCCCCEEEEEECC-Ce
Q 017601 239 SV-----GDILYAVCSSSTG-NI-AVAGADRTVTIYDPRR---WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD-YE 307 (369)
Q Consensus 239 ~~-----~~~v~~v~~sp~g-~l-asgs~D~~v~vwD~~~---~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D-~~ 307 (369)
.. ...+..++|+|+| +| ++...++.|.+||+.. .+.+..+..+ ...+..++|+| |+++|++++.+ +.
T Consensus 232 ~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 232 IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDP-TEAFVVVVNQNTDN 309 (347)
T ss_dssp SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECT-TSSEEEEEETTTTE
T ss_pred cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECC-CCCEEEEEEcCCCc
Confidence 10 1458899999999 55 5666799999999973 3556666666 66789999999 99998888765 89
Q ss_pred EEEEEC--cCCcee
Q 017601 308 VFCGQW--RESSKV 319 (369)
Q Consensus 308 i~vwd~--~~~~~~ 319 (369)
|.+|++ .++++.
T Consensus 310 v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 310 ATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEECTTTCCEE
T ss_pred EEEEEEeCCCCeEE
Confidence 999955 455544
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=7e-14 Score=142.85 Aligned_cols=242 Identities=13% Similarity=0.050 Sum_probs=150.8
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....+++|+||+ .++++. +|+|++|++.++.. ...+..+..........+++|||++ ..++.+ +.+
T Consensus 16 ~~~~~~~~w~~dg----~~~~~~--~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~-~~~ 82 (740)
T 4a5s_A 16 RLKLYSLRWISDH----EYLYKQ--ENNILVFNAEYGNS-----SVFLENSTFDEFGHSINDYSISPDG-QFILLE-YNY 82 (740)
T ss_dssp CCCCCCEEECSSS----EEEEEE--TTEEEEEETTTCCE-----EEEECTTTTTTCCSCCCEEEECTTS-SEEEEE-EEE
T ss_pred cccccccEECCCC----cEEEEc--CCcEEEEECCCCce-----EEEEechhhhhhcccccceEECCCC-CEEEEE-ECC
Confidence 3456789999984 677775 78999999986631 1112222211111112258899965 456665 444
Q ss_pred ---------ceEEEEeCCcce-EEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee-eeccC
Q 017601 172 ---------KSIDVYDQDIHL-RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR-ICGSV 240 (369)
Q Consensus 172 ---------~~i~lwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~-~~~~~ 240 (369)
+.+.+||..... ..+ ..++..+.... ++|||..|+.+ .|+.|.+||+.++ ...+. ..++
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l--~~~~~~~~~~~---~SPdG~~la~~-~~~~i~~~~~~~~---~~~~lt~~g~- 152 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITE--ERIPNNTQWVT---WSPVGHKLAYV-WNNDIYVKIEPNL---PSYRITWTGK- 152 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCS--SCCCTTEEEEE---ECSSTTCEEEE-ETTEEEEESSTTS---CCEECCSCCB-
T ss_pred eeeEEEccceEEEEEECCCCcEEEc--ccCCCcceeeE---ECCCCCEEEEE-ECCeEEEEECCCC---ceEEEcCCCC-
Confidence 556799986432 222 22333444444 45677777766 5789999999877 33221 1121
Q ss_pred CCcE-----------------EEEEECCCC-cEEEEeCCC------------------------------------cEEE
Q 017601 241 GDIL-----------------YAVCSSSTG-NIAVAGADR------------------------------------TVTI 266 (369)
Q Consensus 241 ~~~v-----------------~~v~~sp~g-~lasgs~D~------------------------------------~v~v 266 (369)
...+ .++.||||| .||.++.|. +|++
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v 232 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFV 232 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEE
Confidence 1222 248999999 888875432 4788
Q ss_pred EeCCC---ce--eeeecc------ccccCceEEEEEcCCCCCEEEEEEC----CCeEEEEECcCCc----ee--EEE--E
Q 017601 267 YDPRR---WS--ALSRWV------HCSKYEITGLSFSSIDSNYIYVQGV----DYEVFCGQWRESS----KV--FAF--R 323 (369)
Q Consensus 267 wD~~~---~~--~~~~~~------~h~~~~v~~l~~sp~d~~~l~s~s~----D~~i~vwd~~~~~----~~--~~~--~ 323 (369)
||+.+ ++ ....+. +| ...+..++||| |++.++.... +..|++||+.+++ +. ..+ .
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~ 310 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIG-DHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM 310 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTS-CEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE
T ss_pred EECCCCCCCCcceEEEecCCccCCCC-CeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec
Confidence 99988 63 222332 37 77899999999 9997665532 3479999999876 22 222 5
Q ss_pred cCCCeee------eeEcCCCCEEE-EEeCC---CcEEEEECCCCc
Q 017601 324 GDSNWLG------FSKCSNRDVLG-GWSDS---GSIFVADVVAKE 358 (369)
Q Consensus 324 g~~~~~~------~~~~~d~~~l~-sgs~d---g~I~iWd~~~~~ 358 (369)
+|..|.. ...++||+.|+ ..+++ ..|++||+.+++
T Consensus 311 ~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 311 STTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp CSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred cCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 5665543 34467999877 66654 478889987664
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=1e-13 Score=139.53 Aligned_cols=251 Identities=11% Similarity=0.001 Sum_probs=155.5
Q ss_pred cCCccceeeEEEEeecCCCCceEEEEE--ecCCcEEEEEecCCCCCCccccccccCCCCCC----CCCCeeEEEEC--CC
Q 017601 88 RCPHRSEVQSIALAETDSSGYMVLGSV--DSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGV----GEGSWSGLCFS--PS 159 (369)
Q Consensus 88 ~~~H~~~V~~l~~s~~~~~~~~~las~--d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~--p~ 159 (369)
+.+|...|..++|+++ ....++. +.+++..+|....+.. ...+..+...+ .+-+-...+|+ |+
T Consensus 19 ~~~~~~~~~~~~~s~~----~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 19 VASRSGRPACVGAVGD----EVWWVAPRPAEAGRATLVRRRADGA-----EESALPAPWNVRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp HHHTCSCCEEEEEETT----EEEEEEEETTTTTEEEEEEECTTSC-----EEESSCTTCCBCCCGGGTCCCCEEEECCSS
T ss_pred HhhcCCccceeEEcCC----eEEEEecCcccCCcEEEEEECCCCC-----cceeCCCCccccccccccCCccceeeeecC
Confidence 3468899999999976 4566666 5567788887643211 12222221110 01111124444 86
Q ss_pred CceeEEEEecccceEEEEeCC----cceEEEEeee---CCcceeeeccCCCCCCCCcEEEEEcC----------CeEEEE
Q 017601 160 QWSMAAVARSFSKSIDVYDQD----IHLRTLRTLW---YPSSLNFVQNLSPVNGGPNMLAVTEG----------CQLTIW 222 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~----~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~lla~s~d----------~~v~iw 222 (369)
+..+++.+...+..|.+++.+ ...+.+.... +...+.... ++||+..|++++.+ .+|.+|
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~---~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPV---LLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEE---EETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcE---ECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 554155553446677777765 4444443211 122222222 34678888888876 589999
Q ss_pred eCCc------ccCCceeeeee-ccCCCcEEEEEECCCC-cEEEEeCCC--------cEEEEeCC-Cc---eeeeeccccc
Q 017601 223 DLRM------KENGGCLHRIC-GSVGDILYAVCSSSTG-NIAVAGADR--------TVTIYDPR-RW---SALSRWVHCS 282 (369)
Q Consensus 223 D~~~------~~~~~~~~~~~-~~~~~~v~~v~~sp~g-~lasgs~D~--------~v~vwD~~-~~---~~~~~~~~h~ 282 (369)
|+.+ + ... .+. .+ ...+..++||||| +|+.++.++ .|.+||+. ++ +......+|
T Consensus 167 ~~~~~~~~~~~---~~~-~l~~~~-~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~- 240 (662)
T 3azo_A 167 PLDGSAAADRS---AVR-ELSDDA-HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP- 240 (662)
T ss_dssp ETTSTTTTCGG---GSE-ESSCSC-SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-
T ss_pred ECCCCccccCC---cee-EEEecC-CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-
Confidence 9987 4 332 333 22 3678889999999 888777553 79999998 56 444444455
Q ss_pred cCceEEEEEcCCCCCEEEEEECCC--eEEEEECcCCceeEEEEcCCCe---------eeeeEcCCCCEEEEEeCCCcEEE
Q 017601 283 KYEITGLSFSSIDSNYIYVQGVDY--EVFCGQWRESSKVFAFRGDSNW---------LGFSKCSNRDVLGGWSDSGSIFV 351 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s~s~D~--~i~vwd~~~~~~~~~~~g~~~~---------~~~~~~~d~~~l~sgs~dg~I~i 351 (369)
...+..+.|+| ||+++++++.|+ .|.+||+.+++......++... ..+...+++.++++++. +.+++
T Consensus 241 ~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 241 EEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp TBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred CceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 68899999999 999888888888 6666676666554443333211 12233468899999999 99999
Q ss_pred E--ECCCCc
Q 017601 352 A--DVVAKE 358 (369)
Q Consensus 352 W--d~~~~~ 358 (369)
| |+.+++
T Consensus 319 ~~~d~~~~~ 327 (662)
T 3azo_A 319 GILDPESGE 327 (662)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 9 555443
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=1.9e-13 Score=127.92 Aligned_cols=248 Identities=8% Similarity=-0.016 Sum_probs=142.4
Q ss_pred cCCccceeeE-----EEEeecCCCCceEEEEEec-CC--cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC
Q 017601 88 RCPHRSEVQS-----IALAETDSSGYMVLGSVDS-YG--HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 88 ~~~H~~~V~~-----l~~s~~~~~~~~~las~d~-~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
+..|.+.... .+|+||+ ..|+.... +| +||+||+.++. ...+.... .....+++|+|+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~g~~~l~~~d~~~g~------~~~lt~~~----~~~~~~~~~spd 91 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDG----SKLLFGGAFDGPWNYYLLDLNTQV------ATQLTEGR----GDNTFGGFLSPD 91 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTS----CEEEEEECTTSSCEEEEEETTTCE------EEECCCSS----CBCSSSCEECTT
T ss_pred ecCCcccccchhhcCccCCCCC----CEEEEEEcCCCCceEEEEeCCCCc------eEEeeeCC----CCCccceEEcCC
Confidence 3455555555 8899985 44444433 66 48888876541 11111110 011124789995
Q ss_pred CceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE----------------------cCC
Q 017601 160 QWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT----------------------EGC 217 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s----------------------~d~ 217 (369)
+ ..|+.+ +.++.|.+||............+........+ ..++++..++... .+.
T Consensus 92 g-~~l~~~-~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 92 D-DALFYV-KDGRNLMRVDLATLEENVVYQVPAEWVGYGTW-VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp S-SEEEEE-ETTTEEEEEETTTCCEEEEEECCTTEEEEEEE-EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred C-CEEEEE-eCCCeEEEEECCCCcceeeeechhhcccccce-eECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 5 456666 67789999998643221111111111111111 0125555554321 246
Q ss_pred eEEEEeCCcccCCceeeeeeccCCCcEEEEEECC-CC-cEEEEeCC------CcEEEEeCCCceeeeecccccc-CceEE
Q 017601 218 QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSS-TG-NIAVAGAD------RTVTIYDPRRWSALSRWVHCSK-YEITG 288 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g-~lasgs~D------~~v~vwD~~~~~~~~~~~~h~~-~~v~~ 288 (369)
.|.+||+.++ +......+. ..+..++|+| +| .|+..+.+ ..|.++|+..++ ...+..+.. ..+..
T Consensus 169 ~l~~~d~~~g---~~~~l~~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 169 RLMRVDLKTG---ESTVILQEN--QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTH 242 (388)
T ss_dssp EEEEEETTTC---CEEEEEEES--SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEE
T ss_pred eEEEEECCCC---ceEEeecCC--ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCccccc
Confidence 8999999987 443333343 6789999999 99 77776653 377888876544 344444412 35888
Q ss_pred EEEcCCCCCEEEEEECC-C----eEEEEECcCCcee--EEEEcCCCe----eeeeEcCCCCEEEEE---------eCCCc
Q 017601 289 LSFSSIDSNYIYVQGVD-Y----EVFCGQWRESSKV--FAFRGDSNW----LGFSKCSNRDVLGGW---------SDSGS 348 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D-~----~i~vwd~~~~~~~--~~~~g~~~~----~~~~~~~d~~~l~sg---------s~dg~ 348 (369)
+.||| ||+.|+..+.+ + .|++||+.+++.. ..+.++... .+...++||+.|+.. ..+..
T Consensus 243 ~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 243 EFWVP-DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp EEECT-TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred ceECC-CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 99999 99977665442 2 3999999987643 333331100 112335677776643 55679
Q ss_pred EEEEECCCCcc
Q 017601 349 IFVADVVAKEN 359 (369)
Q Consensus 349 I~iWd~~~~~~ 359 (369)
|++||+.+++.
T Consensus 322 i~~~d~~~~~~ 332 (388)
T 3pe7_A 322 LYVFNMKNGTQ 332 (388)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEeccCCce
Confidence 99999988753
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=7.6e-13 Score=121.83 Aligned_cols=237 Identities=8% Similarity=0.028 Sum_probs=156.2
Q ss_pred ceeeEEEEeecCCCCceEEEEEecC------------------------CcEEEEEecCCCCCCccccccccCCCCCCCC
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSY------------------------GHLIVSKLDTSGKDVDRLTYSVLPQDCGVGE 148 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~------------------------g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (369)
+.+.+|+++|++ .++++...+ ++|++||..++.. . .... ..+ -
T Consensus 24 ~~v~~va~d~~G----~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~-~~~~-~~~-----~ 90 (329)
T 3fvz_A 24 GQVSGVALDSKN----NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--L-QSSG-KNL-----F 90 (329)
T ss_dssp SCEEEEEECTTC----CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--E-EEEC-TTT-----C
T ss_pred CCceEEEECCCC----CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--E-eccC-CCc-----c
Confidence 779999999974 455554444 4688888764411 0 0010 000 0
Q ss_pred CCeeEEEECCCCceeEEEEecccceEEEEeCCcc---eEEEEe----------eeCCcceeeeccCCCCC-CCCcEEEEE
Q 017601 149 GSWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH---LRTLRT----------LWYPSSLNFVQNLSPVN-GGPNMLAVT 214 (369)
Q Consensus 149 ~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~---~~~~~~----------~~~~~~v~~~~~~~~~~-~~~~lla~s 214 (369)
..-.+++++|++. ++++. ..++.|.+||.+.. +..+.. ...|..+.+ ++ ++..+++.+
T Consensus 91 ~~p~gia~d~~g~-l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~------~~~~g~lyv~d~ 162 (329)
T 3fvz_A 91 YLPHGLSIDTDGN-YWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV------EPSTGAVFVSDG 162 (329)
T ss_dssp SSEEEEEECTTSC-EEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE------CTTTCCEEEEEC
T ss_pred CCceEEEECCCCC-EEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE------eCCCCeEEEEeC
Confidence 1234899999554 66665 77899999997533 333311 012223333 34 344555555
Q ss_pred -cCCeEEEEeCCcccCCceeeeeeccC---------CCcEEEEEECCC-C-cEEEEeCCCcEEEEeCCCceeeeecc--c
Q 017601 215 -EGCQLTIWDLRMKENGGCLHRICGSV---------GDILYAVCSSST-G-NIAVAGADRTVTIYDPRRWSALSRWV--H 280 (369)
Q Consensus 215 -~d~~v~iwD~~~~~~~~~~~~~~~~~---------~~~v~~v~~sp~-g-~lasgs~D~~v~vwD~~~~~~~~~~~--~ 280 (369)
.++.|++||. .+ ..+..+.... ......++|+|+ + ++++...++.|++||..+++.+.++. .
T Consensus 163 ~~~~~I~~~~~-~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 163 YCNSRIVQFSP-SG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS 238 (329)
T ss_dssp SSCCEEEEECT-TS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred CCCCeEEEEcC-CC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence 5899999994 44 5555553220 123889999999 6 77777889999999999888888774 4
Q ss_pred cccCceEEEEEcCCCCCEEEEEEC-------CCeEEEEECcCCceeEEEE---cCCC-eeeeeEcCCCCEEEEEeCCCcE
Q 017601 281 CSKYEITGLSFSSIDSNYIYVQGV-------DYEVFCGQWRESSKVFAFR---GDSN-WLGFSKCSNRDVLGGWSDSGSI 349 (369)
Q Consensus 281 h~~~~v~~l~~sp~d~~~l~s~s~-------D~~i~vwd~~~~~~~~~~~---g~~~-~~~~~~~~d~~~l~sgs~dg~I 349 (369)
+ ...+.+++|+| +..+++.+. +.+|++||..+++.+..+. ++.. ..++...++|.++++...++.|
T Consensus 239 ~-~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 239 F-GRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp T-TTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred c-CCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 5 56788999998 444444433 3489999999999988884 3321 2455556789889999999999
Q ss_pred EEEECCCC
Q 017601 350 FVADVVAK 357 (369)
Q Consensus 350 ~iWd~~~~ 357 (369)
++|++...
T Consensus 316 ~~~~~~~~ 323 (329)
T 3fvz_A 316 WKFTLTEK 323 (329)
T ss_dssp EEEEEEEC
T ss_pred EEEeCCcc
Confidence 99998653
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.57 E-value=2.4e-14 Score=145.55 Aligned_cols=237 Identities=12% Similarity=0.004 Sum_probs=144.1
Q ss_pred eeeEEEEeecCCCCceEEEEEec---------CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 94 EVQSIALAETDSSGYMVLGSVDS---------YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~---------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
.|.+++||||+ ..|+.++. ++.+++||+.++.. +. ...+. ..+..++|||++ ..|
T Consensus 61 ~~~~~~~SpDg----~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~-~~--~~~l~--------~~~~~~~~SPDG-~~l 124 (719)
T 1z68_A 61 NASNYGLSPDR----QFVYLESDYSKLWRYSYTATYYIYDLSNGEF-VR--GNELP--------RPIQYLCWSPVG-SKL 124 (719)
T ss_dssp TCSEEEECTTS----SEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CC--SSCCC--------SSBCCEEECSST-TCE
T ss_pred ceeeEEECCCC----CeEEEEecCceeEEeecceEEEEEECCCCcc-cc--ceecC--------cccccceECCCC-CEE
Confidence 38999999985 45555543 68999999875511 00 01111 124469999965 456
Q ss_pred EEEecccceEEEEeCCc-ceEEEEeeeCCccee--------------eeccCCCCCCCCcEEEEEcCC------------
Q 017601 165 AVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLN--------------FVQNLSPVNGGPNMLAVTEGC------------ 217 (369)
Q Consensus 165 a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~--------------~~~~~~~~~~~~~lla~s~d~------------ 217 (369)
|.+ .++.|++||... ....+....+...+. ......++||+..|++++.|.
T Consensus 125 a~~--~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~ 202 (719)
T 1z68_A 125 AYV--YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYG 202 (719)
T ss_dssp EEE--ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECC
T ss_pred EEE--ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccC
Confidence 666 378999999742 222221111111000 001122456788888877542
Q ss_pred ----------------------eEEEEeCCcccCCcee---e-----eeeccCCCcEEEEEECCCC-cEEEEeCC----C
Q 017601 218 ----------------------QLTIWDLRMKENGGCL---H-----RICGSVGDILYAVCSSSTG-NIAVAGAD----R 262 (369)
Q Consensus 218 ----------------------~v~iwD~~~~~~~~~~---~-----~~~~~~~~~v~~v~~sp~g-~lasgs~D----~ 262 (369)
+|++||+.++ +.. . .+..+ ...+.+++||||+ ++++.... .
T Consensus 203 ~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~SpD~~~~~~~~~~~~~~~ 278 (719)
T 1z68_A 203 DEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP---AYVGPQEVPVPAMIASS-DYYFSWLTWVTDERVCLQWLKRVQNVS 278 (719)
T ss_dssp SSSSCEEEEEECCBTTSCCCEEEEEEEESSCH---HHHCCEECCCCHHHHTS-CEEEEEEEESSSSEEEEEEEESSTTEE
T ss_pred CCCCccceeecCCCCCCCCCeeEEEEEECCCC---CccceeEccCCccCCCC-cceEEEeEEeCCCeEEEEEeccccCeE
Confidence 7889999877 332 1 12223 4678999999999 66664432 2
Q ss_pred cEEEEe----CCCceeeeec----cccccCceE-----EEEEcCCCCCEEEE--EECCC--eEEEEECcCCceeEEEEcC
Q 017601 263 TVTIYD----PRRWSALSRW----VHCSKYEIT-----GLSFSSIDSNYIYV--QGVDY--EVFCGQWRESSKVFAFRGD 325 (369)
Q Consensus 263 ~v~vwD----~~~~~~~~~~----~~h~~~~v~-----~l~~sp~d~~~l~s--~s~D~--~i~vwd~~~~~~~~~~~g~ 325 (369)
.|.+|| +.+++....+ .+| ...+. .+.|+| ||+.|+. ...++ .|.+||+.+++. ..+..+
T Consensus 279 ~l~~~d~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~ 355 (719)
T 1z68_A 279 VLSICDFREDWQTWDCPKTQEHIEESR-TGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSG 355 (719)
T ss_dssp EEEEEEECSSSSSEECCGGGEEEEECS-SSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCS
T ss_pred EEEEEcccCCCCCCceEEEEecccccC-CceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCce-EecccC
Confidence 488899 8888777666 466 66676 889999 9986554 44555 577778776653 344333
Q ss_pred C-CeeeeeEcCCCCEEEEEeC-----CCcEEEEECCC
Q 017601 326 S-NWLGFSKCSNRDVLGGWSD-----SGSIFVADVVA 356 (369)
Q Consensus 326 ~-~~~~~~~~~d~~~l~sgs~-----dg~I~iWd~~~ 356 (369)
. ....+... +++.|+..+. ++.+++|.+..
T Consensus 356 ~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 356 KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 2 11223334 6666655554 48889998754
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.56 E-value=1.8e-12 Score=120.34 Aligned_cols=223 Identities=12% Similarity=0.064 Sum_probs=131.9
Q ss_pred cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc----cceEEEEeCCc---ceEEEEe
Q 017601 116 SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF----SKSIDVYDQDI---HLRTLRT 188 (369)
Q Consensus 116 ~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~----d~~i~lwd~~~---~~~~~~~ 188 (369)
.++.|++|.++.....+.... .. +. .....++|+|++. .++++ +. ++.|.+|+++. ..+.+..
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~-~~--~~-----~~p~~l~~spdg~-~l~~~-~~~~~~~~~v~~~~~~~~~g~~~~~~~ 94 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLS-DA--EV-----ANPSYLIPSADGK-FVYSV-NEFSKDQAAVSAFAFDKEKGTLHLLNT 94 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEE-EE--EC-----SCCCSEEECTTSS-EEEEE-ECCSSTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCEEEee-cc--cC-----CCCceEEECCCCC-EEEEE-EccCCCCCcEEEEEEeCCCCcEEEeeE
Confidence 356788888865422211110 11 11 1122599999654 55555 34 37999997642 2333322
Q ss_pred ee-CCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCcee-eeeeccC---------CCcEEEEEECCCC-cE
Q 017601 189 LW-YPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCL-HRICGSV---------GDILYAVCSSSTG-NI 255 (369)
Q Consensus 189 ~~-~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~-~~~~~~~---------~~~v~~v~~sp~g-~l 255 (369)
.. .......+.. ++..+++++ .+++|.+||+........+ ..+.... ...+.+++|+|+| +|
T Consensus 95 ~~~~~~~p~~~~~-----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 95 QKTMGADPCYLTT-----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EECSSSCEEEEEE-----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eccCCCCcEEEEE-----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 22 2222233331 355666655 5889999999754211111 1111110 1346889999999 56
Q ss_pred EEE-eCCCcEEEEeCCCcee------e------ee-ccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCCce--
Q 017601 256 AVA-GADRTVTIYDPRRWSA------L------SR-WVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRESSK-- 318 (369)
Q Consensus 256 asg-s~D~~v~vwD~~~~~~------~------~~-~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~~~-- 318 (369)
+++ ..++.|.+|++..... + .. ...+ ......++|+| |++++++++ .+++|.+||+.+++.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-GSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-TCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-CCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 554 4589999998875331 1 11 1223 45678999999 999887777 689999999987654
Q ss_pred eEEEEcCC----CeeeeeEcCCCCEEEEEeCC--CcEEEEECC
Q 017601 319 VFAFRGDS----NWLGFSKCSNRDVLGGWSDS--GSIFVADVV 355 (369)
Q Consensus 319 ~~~~~g~~----~~~~~~~~~d~~~l~sgs~d--g~I~iWd~~ 355 (369)
+..+.... ....+...+||++|+.+..+ +.|.+|++.
T Consensus 248 ~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 248 IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 23332221 11245567899988766654 899999985
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.54 E-value=6.8e-12 Score=117.03 Aligned_cols=196 Identities=7% Similarity=-0.085 Sum_probs=124.2
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCC-c-ceEEEEeeeCCcceeeeccCCCCCCCCc-EEEEE--------------
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQD-I-HLRTLRTLWYPSSLNFVQNLSPVNGGPN-MLAVT-------------- 214 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~-lla~s-------------- 214 (369)
..++|+|++. +++++ +.+ .|.+||.. . ....+........ .....++|++.. ++.++
T Consensus 43 ~~~a~spdg~-~l~~~-~~~-~v~~~~~~~~g~~~~~~~~~~~g~---~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 43 SWMTFDHERK-NIYGA-AMK-KWSSFAVKSPTEIVHEASHPIGGH---PRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp SEEEECTTSS-EEEEE-EBT-EEEEEEEEETTEEEEEEEEECCSS---GGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred cEEEECCCCC-EEEEE-ccc-eEEEEEECCCCCEEEeeEeecCCC---CccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3699999654 55555 555 99999864 2 2211111111011 112345576664 33332
Q ss_pred cCCeEEEEeCCc-ccCCceeeeee---ccCCCcEEEEEECCCC-cEEEEe-CCCcEEEEeCC-Cceee--eecc--cccc
Q 017601 215 EGCQLTIWDLRM-KENGGCLHRIC---GSVGDILYAVCSSSTG-NIAVAG-ADRTVTIYDPR-RWSAL--SRWV--HCSK 283 (369)
Q Consensus 215 ~d~~v~iwD~~~-~~~~~~~~~~~---~~~~~~v~~v~~sp~g-~lasgs-~D~~v~vwD~~-~~~~~--~~~~--~h~~ 283 (369)
.++++.+|++.. + +....+. ......+.+++|+|+| +|+++. .++.|++||+. +++.. ..+. .| .
T Consensus 117 ~~g~v~v~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~-g 192 (365)
T 1jof_A 117 FAGYGNVFSVSETG---KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP-G 192 (365)
T ss_dssp SCCEEEEEEECTTC---CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST-T
T ss_pred CCceEEEEccCCCC---cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC-C
Confidence 588999999974 4 3333322 1113679999999999 777665 47899999998 66542 3333 24 5
Q ss_pred CceEEEEEcCCCCCEEEEEEC-CCeEEEEECc--CCceeE---EEE-------cCC-------Ceeeee-EcCCCCEEEE
Q 017601 284 YEITGLSFSSIDSNYIYVQGV-DYEVFCGQWR--ESSKVF---AFR-------GDS-------NWLGFS-KCSNRDVLGG 342 (369)
Q Consensus 284 ~~v~~l~~sp~d~~~l~s~s~-D~~i~vwd~~--~~~~~~---~~~-------g~~-------~~~~~~-~~~d~~~l~s 342 (369)
..+..++|+| |+++|++++. +++|.+|++. +++... .+. +|. ....+. .++||++|++
T Consensus 193 ~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 193 DHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 6689999999 9999888775 7899999876 455422 222 222 124566 6789998887
Q ss_pred EeCCC------cEEEEECC-CCc
Q 017601 343 WSDSG------SIFVADVV-AKE 358 (369)
Q Consensus 343 gs~dg------~I~iWd~~-~~~ 358 (369)
++.+. .|.+|++. +++
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSC
T ss_pred ECCCCCCCCCCeEEEEEECCCCC
Confidence 66533 89999986 444
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.54 E-value=5.3e-13 Score=124.88 Aligned_cols=245 Identities=8% Similarity=-0.055 Sum_probs=145.4
Q ss_pred ccceeeEEEEeecCCCCceEEEEEec--CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDS--YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~--~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
|...+..++|+||+ ..++.+.+. ...+++|++..+. ...+..... .....++|+|++ ..|+..
T Consensus 34 ~~~~~~~~~~SpdG---~~l~~~~~~~g~~~l~~~d~~~~~------~~~l~~~~~----~~~~~~~~spdg-~~l~~~- 98 (396)
T 3c5m_A 34 HRNYFYQKCFTQDG---KKLLFAGDFDGNRNYYLLNLETQQ------AVQLTEGKG----DNTFGGFISTDE-RAFFYV- 98 (396)
T ss_dssp ECCCTTSCCBCTTS---CEEEEEECTTSSCEEEEEETTTTE------EEECCCSSC----BCTTTCEECTTS-SEEEEE-
T ss_pred cceeeecCcCCCCC---CEEEEEEecCCCceEEEEECCCCc------EEEeecCCC----CccccceECCCC-CEEEEE-
Confidence 33447788999985 233334433 3468888876441 111111110 001137899955 456666
Q ss_pred cccceEEEEeCCc-ceEEEEeeeCC-----cceeeecc----------CCCCCCCCcEEEE-----EcCCeEEEEeCCcc
Q 017601 169 SFSKSIDVYDQDI-HLRTLRTLWYP-----SSLNFVQN----------LSPVNGGPNMLAV-----TEGCQLTIWDLRMK 227 (369)
Q Consensus 169 s~d~~i~lwd~~~-~~~~~~~~~~~-----~~v~~~~~----------~~~~~~~~~lla~-----s~d~~v~iwD~~~~ 227 (369)
+.++.|.+||... ..+.+...... ..+.+... ..++|++..++.. ..+..|.+||+.++
T Consensus 99 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g 178 (396)
T 3c5m_A 99 KNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETG 178 (396)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTC
T ss_pred EcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCC
Confidence 5677899999753 22222211110 01111000 1234555555443 34568999999887
Q ss_pred cCCceeeeeeccCCCcEEEEEECC-CC-cEEEEeCC------CcEEEEeCCCceeeeeccccc-cCceEEEEEcCCCCCE
Q 017601 228 ENGGCLHRICGSVGDILYAVCSSS-TG-NIAVAGAD------RTVTIYDPRRWSALSRWVHCS-KYEITGLSFSSIDSNY 298 (369)
Q Consensus 228 ~~~~~~~~~~~~~~~~v~~v~~sp-~g-~lasgs~D------~~v~vwD~~~~~~~~~~~~h~-~~~v~~l~~sp~d~~~ 298 (369)
+......+. ..+..+.|+| ++ .|+..+.+ ..|.+||+..++.. .+..+. ...+..+.|+| |++.
T Consensus 179 ---~~~~~~~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp-dg~~ 251 (396)
T 3c5m_A 179 ---ELEVIHQDT--AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIP-DGSA 251 (396)
T ss_dssp ---CEEEEEEES--SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECT-TSSC
T ss_pred ---cEEeeccCC--cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECC-CCCE
Confidence 444334443 7789999999 77 67666543 36888898765433 333331 23588899999 9998
Q ss_pred EEEEECC-----CeEEEEECcCCceeEEEEcCCCeeeeeEcC-CCCEEEEEe----------------CCCcEEEEECCC
Q 017601 299 IYVQGVD-----YEVFCGQWRESSKVFAFRGDSNWLGFSKCS-NRDVLGGWS----------------DSGSIFVADVVA 356 (369)
Q Consensus 299 l~s~s~D-----~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~-d~~~l~sgs----------------~dg~I~iWd~~~ 356 (369)
|+..+.+ +.|++||+.+++......... .....++ ||++|+.++ .++.|++||+.+
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred EEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 8777654 459999998876544433222 2244567 999888765 347899999987
Q ss_pred Ccc
Q 017601 357 KEN 359 (369)
Q Consensus 357 ~~~ 359 (369)
++.
T Consensus 330 ~~~ 332 (396)
T 3c5m_A 330 KSA 332 (396)
T ss_dssp TBC
T ss_pred Cce
Confidence 753
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.49 E-value=4.1e-12 Score=127.70 Aligned_cols=241 Identities=12% Similarity=-0.010 Sum_probs=141.1
Q ss_pred EEEEe--ecCCCCce-EEEEEecCCcEEEEEec--C-CCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 97 SIALA--ETDSSGYM-VLGSVDSYGHLIVSKLD--T-SGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 97 ~l~~s--~~~~~~~~-~las~d~~g~v~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
..+|+ ||+ .. ++.+.+.+..||+++++ . + . ...+...........+.+++|+|++. .|+.+ +.
T Consensus 81 ~~~~~~SPDg---~~~la~~~~~~~~l~~~~~~~~g~~-~-----~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~-~~ 149 (662)
T 3azo_A 81 PWAGVPRPAG---GPLLVFTHFGDQRLYAFEPDAPGGA-V-----PRPLTPVSAVGGGLRWADPVLLPERG-EVWCM-AE 149 (662)
T ss_dssp CEEEECCSSS---SCEEEEEBTTTCCEEEECTTSTTCC-C-----CEECSCCCCSTTCEEEEEEEEETTTT-EEEEE-EE
T ss_pred cceeeeecCC---CeEEEEEECCCCeEEEEcCCCCCCC-C-----CEeccCCccCCCCccccCcEECCCCC-EEEEE-Ee
Confidence 55666 874 34 45555557788888775 2 2 1 11111110000112355799999655 55555 45
Q ss_pred c----------ceEEEEeCCc-------ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC--------CeEEEEeCC
Q 017601 171 S----------KSIDVYDQDI-------HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG--------CQLTIWDLR 225 (369)
Q Consensus 171 d----------~~i~lwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d--------~~v~iwD~~ 225 (369)
+ .+|.+||... ..+.+. ..+.. +.....++||+..|+.++.+ ..|.+||+.
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~-~~~~~---~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS-DDAHR---FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS-CSCSS---EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred cccCCCCCCceeEEEEEECCCCccccCCceeEEE-ecCCC---cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 5 5899999754 333221 01222 22223356778788877754 379999998
Q ss_pred -cccCCceeeeee-ccCCCcEEEEEECCCC-cEEEEeCCC--cEEEEeCCCceeeeeccccccCc--------eEEEEEc
Q 017601 226 -MKENGGCLHRIC-GSVGDILYAVCSSSTG-NIAVAGADR--TVTIYDPRRWSALSRWVHCSKYE--------ITGLSFS 292 (369)
Q Consensus 226 -~~~~~~~~~~~~-~~~~~~v~~v~~sp~g-~lasgs~D~--~v~vwD~~~~~~~~~~~~h~~~~--------v~~l~~s 292 (369)
++.. .....+. ++ ...+..++|+||| ++++++.++ .|.+||+.+++......++ ... +..++|+
T Consensus 226 ~~g~~-~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 226 EDGRF-ADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp TTSCE-EEEEEEEEET-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCSEEEC
T ss_pred CCCcc-cccEEeCCCC-CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc-ccccCccccccCceEeEe
Confidence 3410 1233333 32 3789999999999 888888888 5666676666654433333 222 5689999
Q ss_pred CCCCCEEEEEECCCeEEEE--ECcCCceeEEEEcCCCeeeeeEcCCCC--EEEEEeCCC--cEEEEECCCCc
Q 017601 293 SIDSNYIYVQGVDYEVFCG--QWRESSKVFAFRGDSNWLGFSKCSNRD--VLGGWSDSG--SIFVADVVAKE 358 (369)
Q Consensus 293 p~d~~~l~s~s~D~~i~vw--d~~~~~~~~~~~g~~~~~~~~~~~d~~--~l~sgs~dg--~I~iWd~~~~~ 358 (369)
| +++++++++. ++++|| |+.+++ +..+..|.........++++ ++++++.+. .|++||+.+++
T Consensus 303 ~-~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 303 A-NGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp T-TSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred C-CCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9 9999999998 999999 554444 56666655222111023343 344555554 45566766664
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.44 E-value=3.2e-12 Score=130.58 Aligned_cols=192 Identities=10% Similarity=0.091 Sum_probs=123.4
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcce-EEEEeeeCC---cceeeeccCCCCCCCCcEEEEEcC---------CeE
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHL-RTLRTLWYP---SSLNFVQNLSPVNGGPNMLAVTEG---------CQL 219 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~-~~~~~~~~~---~~v~~~~~~~~~~~~~~lla~s~d---------~~v 219 (369)
+++|+|++ .+++++ |++|++||..... ..+ ...+. ..+.+ ....++||+..++.++.+ +.+
T Consensus 21 ~~~w~~dg-~~~~~~---~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 21 SLRWISDH-EYLYKQ---ENNILVFNAEYGNSSVF-LENSTFDEFGHSI-NDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CEEECSSS-EEEEEE---TTEEEEEETTTCCEEEE-ECTTTTTTCCSCC-CEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccEECCCC-cEEEEc---CCcEEEEECCCCceEEE-Eechhhhhhcccc-cceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 59999954 555553 8999999975322 222 11111 11111 001135778788887765 566
Q ss_pred EEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeee-eccccccCce-----------
Q 017601 220 TIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALS-RWVHCSKYEI----------- 286 (369)
Q Consensus 220 ~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~-~~~~h~~~~v----------- 286 (369)
.+||+.++ +.. .+..+ ...+...+||||| .||.++ |+.|.+||+.+++... +..++ ...+
T Consensus 95 ~~~d~~~~---~~~-~l~~~-~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~-~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 95 DIYDLNKR---QLI-TEERI-PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGK-EDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEETTTT---EEC-CSSCC-CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCB-TTTEEESBCCHHHHH
T ss_pred EEEECCCC---cEE-EcccC-CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCC-ccceecCcccccccc
Confidence 79999987 433 34433 3779999999999 888875 7899999998876543 23343 3322
Q ss_pred ------EEEEEcCCCCCEEEEEECCC------------------------------------eEEEEECcC---Cc--ee
Q 017601 287 ------TGLSFSSIDSNYIYVQGVDY------------------------------------EVFCGQWRE---SS--KV 319 (369)
Q Consensus 287 ------~~l~~sp~d~~~l~s~s~D~------------------------------------~i~vwd~~~---~~--~~ 319 (369)
.++.||| ||+.||..+.|. +|++||+.+ ++ ..
T Consensus 168 e~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 168 EVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred hhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 3589999 999999987543 478888887 63 22
Q ss_pred EEEE------cCCCe-eeeeEcCCCCEEEEEeC----CCcEEEEECCCCc
Q 017601 320 FAFR------GDSNW-LGFSKCSNRDVLGGWSD----SGSIFVADVVAKE 358 (369)
Q Consensus 320 ~~~~------g~~~~-~~~~~~~d~~~l~sgs~----dg~I~iWd~~~~~ 358 (369)
..+. +|..+ ..+..++||++++.... +..|++||+.+++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 2232 24422 23344679987665543 3479999999886
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=1.5e-10 Score=104.41 Aligned_cols=239 Identities=8% Similarity=-0.064 Sum_probs=146.0
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
+..-..+++|+|++ ..++.+....+.|+.|+...+ ...+.. . .....+++|+|++ .++++. ..
T Consensus 26 ~~~~~eg~~~d~~g---~~l~~~~~~~~~i~~~~~~~~-----~~~~~~--~-----~~~~~~l~~~~dg-~l~v~~-~~ 88 (296)
T 3e5z_A 26 GFTWTEGPVYVPAR---SAVIFSDVRQNRTWAWSDDGQ-----LSPEMH--P-----SHHQNGHCLNKQG-HLIACS-HG 88 (296)
T ss_dssp CCSSEEEEEEEGGG---TEEEEEEGGGTEEEEEETTSC-----EEEEES--S-----CSSEEEEEECTTC-CEEEEE-TT
T ss_pred CCccccCCeEeCCC---CEEEEEeCCCCEEEEEECCCC-----eEEEEC--C-----CCCcceeeECCCC-cEEEEe-cC
Confidence 34556799999984 236777777889999987743 111211 1 1224589999954 455555 66
Q ss_pred cceEEEEeC-CcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE---c--------------CCeEEEEeCCcccCCce
Q 017601 171 SKSIDVYDQ-DIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT---E--------------GCQLTIWDLRMKENGGC 232 (369)
Q Consensus 171 d~~i~lwd~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s---~--------------d~~v~iwD~~~~~~~~~ 232 (369)
++.|.+||. ......+................+++++..+++.+ . .+.|..+|.. + +
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g---~- 163 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G---T- 163 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S---C-
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C---C-
Confidence 789999997 33333332111111111111112235565555421 1 2355555554 3 3
Q ss_pred eeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCC-Ccee---eeeccccccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 233 LHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPR-RWSA---LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 233 ~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~-~~~~---~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
+..+... ....+.++|+|+| .+++.+.++.|.+||+. +++. ...+..+ ...+.++++++ +|+++++. ++.
T Consensus 164 ~~~~~~~-~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~p~~i~~d~-~G~l~v~~--~~~ 238 (296)
T 3e5z_A 164 LSAPIRD-RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE-PGKTDGLRVDA-GGLIWASA--GDG 238 (296)
T ss_dssp EEEEECC-CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS-SSCCCSEEEBT-TSCEEEEE--TTE
T ss_pred EEEeecC-CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC-CCCCCeEEECC-CCCEEEEc--CCe
Confidence 3333333 3677999999999 66777888999999987 4443 2333334 56678899999 99877766 889
Q ss_pred EEEEECcCCceeEEEEcCCCeeeeeE-cCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 308 VFCGQWRESSKVFAFRGDSNWLGFSK-CSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 308 i~vwd~~~~~~~~~~~g~~~~~~~~~-~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|.+||.. ++.+..+..+....++.. .+++..|+.++.++ +..++.++++
T Consensus 239 v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 239 VHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred EEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 9999986 677777766553233333 45888888888764 4444555543
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.43 E-value=2.2e-11 Score=111.93 Aligned_cols=207 Identities=10% Similarity=-0.005 Sum_probs=134.3
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCcccccccc--CCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVL--PQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
++-...+.|++++++ .+.++...++.|++|+.+.....+. ..... +......-..-.+++|+|.+..++++.
T Consensus 88 ~~~~~p~gia~d~~g----~l~v~d~~~~~v~~~~~~g~~~~~~--~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d 161 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG----NYWVTDVALHQVFKLDPHSKEGPLL--ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD 161 (329)
T ss_dssp TTCSSEEEEEECTTS----CEEEEETTTTEEEEECTTCSSCCSE--EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred CccCCceEEEECCCC----CEEEEECCCCEEEEEeCCCCeEEEE--EecccCCCCCCccccCCCcEEEEeCCCCeEEEEe
Confidence 344578899999874 4666666678899998753310110 01000 000000011245899999555555555
Q ss_pred ec-ccceEEEEeCCc-ceEEEEee-----------eCCcceeeeccCCCCCC-CCcEEEEEcCCeEEEEeCCcccCCcee
Q 017601 168 RS-FSKSIDVYDQDI-HLRTLRTL-----------WYPSSLNFVQNLSPVNG-GPNMLAVTEGCQLTIWDLRMKENGGCL 233 (369)
Q Consensus 168 ~s-~d~~i~lwd~~~-~~~~~~~~-----------~~~~~v~~~~~~~~~~~-~~~lla~s~d~~v~iwD~~~~~~~~~~ 233 (369)
+ .++.|++||.+. .+..+... ..|..+.+. ++ +..+++...++.|++||..++ +.+
T Consensus 162 -~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d------~~~g~l~v~d~~~~~I~~~~~~~G---~~~ 231 (329)
T 3fvz_A 162 -GYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV------PHLDQLCVADRENGRIQCFKTDTK---EFV 231 (329)
T ss_dssp -CSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE------TTTTEEEEEETTTTEEEEEETTTC---CEE
T ss_pred -CCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE------CCCCEEEEEECCCCEEEEEECCCC---cEE
Confidence 5 589999999653 33333211 123334333 44 334445556889999999877 677
Q ss_pred eeeecc-CCCcEEEEEECCCC-cEEEE-------eCCCcEEEEeCCCceeeeecc---ccccCceEEEEEcCCCCCEEEE
Q 017601 234 HRICGS-VGDILYAVCSSSTG-NIAVA-------GADRTVTIYDPRRWSALSRWV---HCSKYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 234 ~~~~~~-~~~~v~~v~~sp~g-~lasg-------s~D~~v~vwD~~~~~~~~~~~---~h~~~~v~~l~~sp~d~~~l~s 301 (369)
..+... .+..+++++|+| + .+++. ..+.+|++||+.+++.+..+. ++ .....+|+++| +|.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~-dG~lyva 308 (329)
T 3fvz_A 232 REIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASE-DGTVYIG 308 (329)
T ss_dssp EEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC-CSSEEEEEECT-TSEEEEE
T ss_pred EEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECC-CCCEEEE
Confidence 766422 146789999999 6 44443 334589999999999888873 56 67799999999 9988888
Q ss_pred EECCCeEEEEECcC
Q 017601 302 QGVDYEVFCGQWRE 315 (369)
Q Consensus 302 ~s~D~~i~vwd~~~ 315 (369)
...+++|++|++..
T Consensus 309 d~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 309 DAHTNTVWKFTLTE 322 (329)
T ss_dssp ESSSCCEEEEEEEE
T ss_pred ECCCCEEEEEeCCc
Confidence 88899999999864
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.41 E-value=1.2e-10 Score=107.13 Aligned_cols=231 Identities=7% Similarity=0.012 Sum_probs=152.7
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
...+.+.+..+ .+.++....+.|.++|..+... ...+.. .....++++++++ .++++. ..++
T Consensus 44 ~~~~~i~~~~~-----~lyv~~~~~~~v~viD~~t~~~-----~~~i~~------~~~p~~i~~~~~g-~lyv~~-~~~~ 105 (328)
T 3dsm_A 44 DVAQSMVIRDG-----IGWIVVNNSHVIFAIDINTFKE-----VGRITG------FTSPRYIHFLSDE-KAYVTQ-IWDY 105 (328)
T ss_dssp SCEEEEEEETT-----EEEEEEGGGTEEEEEETTTCCE-----EEEEEC------CSSEEEEEEEETT-EEEEEE-BSCS
T ss_pred ccceEEEEECC-----EEEEEEcCCCEEEEEECcccEE-----EEEcCC------CCCCcEEEEeCCC-eEEEEE-CCCC
Confidence 45678888543 4555556678999999876521 111111 0123479998854 444444 5789
Q ss_pred eEEEEeCCc--ceEEEEeee------CCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCC
Q 017601 173 SIDVYDQDI--HLRTLRTLW------YPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGD 242 (369)
Q Consensus 173 ~i~lwd~~~--~~~~~~~~~------~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~ 242 (369)
.|.+||... ....+.... .+..+.+ . ++.+..+. .+++|.+||++++ +.+.++... .
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-------~~~lyv~~~~~~~~v~viD~~t~---~~~~~i~~g--~ 172 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-------GKYVYVNCWSYQNRILKIDTETD---KVVDELTIG--I 172 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-------TTEEEEEECTTCCEEEEEETTTT---EEEEEEECS--S
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-------CCEEEEEcCCCCCEEEEEECCCC---eEEEEEEcC--C
Confidence 999999863 233343333 3444444 2 34555554 3889999999988 667766654 5
Q ss_pred cEEEEEECCCC-cEEEEeCC----------CcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEE
Q 017601 243 ILYAVCSSSTG-NIAVAGAD----------RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCG 311 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D----------~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vw 311 (369)
....++++|+| +++++..+ +.|.+||..+++...++.-........++|+| +++.|+.+.. .|.+|
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~ 249 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRM 249 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEE
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEE
Confidence 56789999999 55555444 78999999998887766532123689999999 9998887654 89999
Q ss_pred ECcCCceeE-E-EEc-CCCeeeeeEcC-CCCEEEEE----eCCCcEEEEECCCCc
Q 017601 312 QWRESSKVF-A-FRG-DSNWLGFSKCS-NRDVLGGW----SDSGSIFVADVVAKE 358 (369)
Q Consensus 312 d~~~~~~~~-~-~~g-~~~~~~~~~~~-d~~~l~sg----s~dg~I~iWd~~~~~ 358 (369)
|..+++... . +.. -....++...+ ++.+.++. ..++.|.+||.. ++
T Consensus 250 d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 250 PVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 998866431 1 111 12224565566 67777777 788999999987 54
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=7.3e-11 Score=104.54 Aligned_cols=236 Identities=10% Similarity=-0.005 Sum_probs=147.3
Q ss_pred eeeEEEEeecCCCCceEEE-EEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 94 EVQSIALAETDSSGYMVLG-SVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~la-s~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
...+|++++++ .+.+ +....+.|++|+...... ..+... . .....++++++++ .++++. . ++
T Consensus 25 ~p~~i~~~~~g----~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~-~-----~~~p~~i~~~~~g-~l~v~~-~-~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAG----NVYVTSEGMYGRVVKLATGSTGT----TVLPFN-G-----LYQPQGLAVDGAG-TVYVTD-F-NN 87 (270)
T ss_dssp CEEEEEECTTC----CEEEEECSSSCEEEEECC---------EECCCC-S-----CCSCCCEEECTTC-CEEEEE-T-TT
T ss_pred CccceEECCCC----CEEEEccCCCCcEEEecCCCccc----ceEeeC-C-----cCCcceeEECCCC-CEEEEc-C-CC
Confidence 66789998873 4555 435667899887653311 001000 0 0112369999954 455554 4 88
Q ss_pred eEEEEeCCcce-EEEEee--eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEE
Q 017601 173 SIDVYDQDIHL-RTLRTL--WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCS 249 (369)
Q Consensus 173 ~i~lwd~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~ 249 (369)
.|.+||..... ..+... ..+..+.+ ++++..+++...++.|.+||..+. ......... ...++++++
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~~~p~~i~~------~~~g~l~v~~~~~~~i~~~~~~~~---~~~~~~~~~-~~~p~~i~~ 157 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGLNYPEGLAV------DTQGAVYVADRGNNRVVKLAAGSK---TQTVLPFTG-LNDPDGVAV 157 (270)
T ss_dssp EEEEECTTCSCCEECCCCSCSSEEEEEE------CTTCCEEEEEGGGTEEEEECTTCC---SCEECCCCS-CCSCCCEEE
T ss_pred EEEEEeCCCceEeeeecCCcCCCcceEE------CCCCCEEEEECCCCEEEEEECCCc---eeEeecccc-CCCceeEEE
Confidence 99999975432 222111 12223322 244555555556789999986554 222211111 246788999
Q ss_pred CCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC-CC
Q 017601 250 SSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD-SN 327 (369)
Q Consensus 250 sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~-~~ 327 (369)
+|+| .+++...++.|.+||............+ ...+.++++++ ++.++++...++.|.+||............+ ..
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 235 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT 235 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS-CCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC
T ss_pred eCCCCEEEEECCCCEEEEEecCCCceEeecccC-CCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC
Confidence 9999 6666667889999998876554433344 46789999999 9988888778899999998765433222222 22
Q ss_pred eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 328 WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 328 ~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
..++...++|.++++.+.++.|++++....+
T Consensus 236 p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 236 PLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 2455556788999999999999999987654
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.40 E-value=8.2e-11 Score=109.74 Aligned_cols=240 Identities=10% Similarity=-0.002 Sum_probs=145.7
Q ss_pred EEEEeecCCCCceEEEEEe----------cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 97 SIALAETDSSGYMVLGSVD----------SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 97 ~l~~s~~~~~~~~~las~d----------~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
.++|+||+ ..++.++ .++.|.+||..+... + ....+.+.....+ ..-.+++|+|++..++++
T Consensus 54 ~i~~spdg----~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-~--~~i~~~~~~~~~g-~~p~~i~~spdg~~l~v~ 125 (361)
T 2oiz_A 54 HVQVSNDG----KKIYTMTTYHERITRGKRSDVVEVWDADKLTF-E--KEISLPPKRVQGL-NYDGLFRQTTDGKFIVLQ 125 (361)
T ss_dssp EEEECTTS----SEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-E--EEEEECTTBCCBC-CCGGGEEECTTSSEEEEE
T ss_pred ceEECCCC----CEEEEEEecccccccCCCCCEEEEEECcCCcE-E--EEEEcCccccccC-CCcceEEECCCCCEEEEE
Confidence 78999984 4555544 356799999764311 1 1111111000000 112369999966544444
Q ss_pred EecccceEEEEeCCcceEEEEe-eeCCcc--eeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceee------eee
Q 017601 167 ARSFSKSIDVYDQDIHLRTLRT-LWYPSS--LNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLH------RIC 237 (369)
Q Consensus 167 ~~s~d~~i~lwd~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~------~~~ 237 (369)
....+++|.+||..... .+.. ...+.. +.+.. . ....+++.+.||++.+|+..... +... .+.
T Consensus 126 n~~~~~~v~v~d~~~~~-~~~~~i~~~~~~~v~~~p---~--~~~~~~~~~~dg~~~~v~~~~~g--~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 126 NASPATSIGIVDVAKGD-YVEDVTAAAGCWSVIPQP---N--RPRSFMTICGDGGLLTINLGEDG--KVASQSRSKQMFS 197 (361)
T ss_dssp EESSSEEEEEEETTTTE-EEEEEGGGTTEEEEEECT---T--SSSEEEEEETTSSEEEEEECTTS--SEEEEEECCCCSC
T ss_pred CCCCCCeEEEEECCCCc-EEEEEecCCCcceeEEcC---C--CCeeEEEECCCCcEEEEEECCCC--cEeeeccccceEc
Confidence 32236899999987542 2222 222221 11211 1 12577888899999999986521 3331 122
Q ss_pred ccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCcee--eeeccc------cc---cCceEEEEEcCCCCCEEEEEEC-
Q 017601 238 GSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSA--LSRWVH------CS---KYEITGLSFSSIDSNYIYVQGV- 304 (369)
Q Consensus 238 ~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~--~~~~~~------h~---~~~v~~l~~sp~d~~~l~s~s~- 304 (369)
.. ..++ .+.++|++ .++..+.++.|.++|+..... ...+.- +. ......++|+| +++.++.+..
T Consensus 198 ~~-~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~ 274 (361)
T 2oiz_A 198 VK-DDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHP 274 (361)
T ss_dssp TT-TSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEES
T ss_pred CC-CCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEcc
Confidence 11 1222 34456777 667777899999999875432 222110 10 01122378999 8887776543
Q ss_pred ----------CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 305 ----------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 305 ----------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
.++|.+||+.+.+.+..+..+. ..++...+||++|++++. +.|.+||.+++
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 3589999999999999998766 567777889999999887 99999999998
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.39 E-value=1.9e-10 Score=103.06 Aligned_cols=188 Identities=13% Similarity=0.184 Sum_probs=128.4
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEee-------eCCcceeeeccCCCCCCCCcEEEEE-c-CCeEEE
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTL-------WYPSSLNFVQNLSPVNGGPNMLAVT-E-GCQLTI 221 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~lla~s-~-d~~v~i 221 (369)
.+++++|++ .++++. ..++.|.+||... ....+... ..+..+.+.. + ++.++.+. . ++.|.+
T Consensus 33 ~~v~~~~~g-~l~v~~-~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~-----~-~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 33 SGVAVNAQN-DIIVAD-TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVR-----N-SGDIIVTERSPTHQIQI 104 (286)
T ss_dssp EEEEECTTC-CEEEEE-GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEET-----T-TTEEEEEECGGGCEEEE
T ss_pred ceEEECCCC-CEEEEE-CCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEc-----C-CCeEEEEcCCCCCEEEE
Confidence 479999954 455655 7789999999753 23333211 1222333321 3 34555544 3 889999
Q ss_pred EeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCE
Q 017601 222 WDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNY 298 (369)
Q Consensus 222 wD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~ 298 (369)
|| .++ +.+..+.......+++++++|+| ++++...++.|.+||.. ++.+..+. ++ ...+.+++++| ++++
T Consensus 105 ~d-~~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~-~~~p~~i~~~~-~g~l 177 (286)
T 1q7f_A 105 YN-QYG---QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH-LEFPNGVVVND-KQEI 177 (286)
T ss_dssp EC-TTS---CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTT-CSSEEEEEECS-SSEE
T ss_pred EC-CCC---cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc-cCCcEEEEECC-CCCE
Confidence 99 445 55555543213578999999999 77777778999999964 55555553 34 45789999999 9998
Q ss_pred EEEEECCCeEEEEECcCCceeEEEEcC---CCeeeeeEcCCCCEEEEEeCCC-cEEEEECC
Q 017601 299 IYVQGVDYEVFCGQWRESSKVFAFRGD---SNWLGFSKCSNRDVLGGWSDSG-SIFVADVV 355 (369)
Q Consensus 299 l~s~s~D~~i~vwd~~~~~~~~~~~g~---~~~~~~~~~~d~~~l~sgs~dg-~I~iWd~~ 355 (369)
+++.+.++.|++||.. ++.+..+..+ ....++...++|.++++...++ .|++||..
T Consensus 178 ~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 8888889999999974 4566666443 2224555566899999988886 99999964
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=6.2e-11 Score=120.43 Aligned_cols=243 Identities=10% Similarity=0.036 Sum_probs=147.5
Q ss_pred CccceeeEEEEeecCCCCceEEE-EEecCC----cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeE
Q 017601 90 PHRSEVQSIALAETDSSGYMVLG-SVDSYG----HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMA 164 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~la-s~d~~g----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 164 (369)
+|...+..++||||+ ..|| +.+..| .|++||+.++.. .. ..... ..+.+++|+|++. .|
T Consensus 122 ~~~~~~~~~~~SPDg----~~la~~~~~~G~~~~~i~v~d~~tg~~-~~---~~~~~-------~~~~~~~wspDg~-~l 185 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG----EYFAYGLSASGSDWVTIKFMKVDGAKE-LP---DVLER-------VKFSCMAWTHDGK-GM 185 (710)
T ss_dssp TSCEEEEEEEECTTS----SEEEEEEEETTCSCEEEEEEETTTTEE-EE---EEEEE-------ECSCCEEECTTSS-EE
T ss_pred CCCEEEEEEEECCCC----CEEEEEEcCCCCceEEEEEEECCCCCC-Cc---ccccC-------cccceEEEEeCCC-EE
Confidence 455678999999985 3444 444444 799999986521 10 01110 0123699999655 45
Q ss_pred EEEecccce----------------EEEEeCCcce---EEEEeee-CCcceeeeccCCCCCCCCcEEEEEc-----CCeE
Q 017601 165 AVARSFSKS----------------IDVYDQDIHL---RTLRTLW-YPSSLNFVQNLSPVNGGPNMLAVTE-----GCQL 219 (369)
Q Consensus 165 a~~~s~d~~----------------i~lwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~lla~s~-----d~~v 219 (369)
+.+ +.++. |.+|+++... ..+.... ++....... +++|+..|+..+. +..|
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~---~SpDg~~l~~~~~~~~~~~~~l 261 (710)
T 2xdw_A 186 FYN-AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE---LSDDGRYVLLSIREGCDPVNRL 261 (710)
T ss_dssp EEE-ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE---ECTTSCEEEEEEECSSSSCCEE
T ss_pred EEE-EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE---EcCCCCEEEEEEEccCCCccEE
Confidence 555 44444 9999986322 1111111 122122222 3467777777664 5789
Q ss_pred EEEeCCc------ccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCC----CcEEEEeCCCcee--eeeccccccC--
Q 017601 220 TIWDLRM------KENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD----RTVTIYDPRRWSA--LSRWVHCSKY-- 284 (369)
Q Consensus 220 ~iwD~~~------~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D----~~v~vwD~~~~~~--~~~~~~h~~~-- 284 (369)
.+||+.+ +. .....+..+ ...+.. .|+|+| .|+..+.+ ..|.+||+.++.. ...+..| ..
T Consensus 262 ~~~d~~~~~~~~~~~--~~~~~l~~~-~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~ 336 (710)
T 2xdw_A 262 WYCDLQQESNGITGI--LKWVKLIDN-FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE-HEKD 336 (710)
T ss_dssp EEEEGGGSSSSSCSS--CCCEEEECS-SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSC
T ss_pred EEEECcccccccCCc--cceEEeeCC-CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC-CCCC
Confidence 9999986 41 234455544 244444 488898 66555443 3699999987642 3455555 33
Q ss_pred ceEEEEEcCCCCCEEEEEECCCe--EEEEECcCCceeEEEEcCCCee-eeeEcCCCCEEE-EEe---CCCcEEEEECCCC
Q 017601 285 EITGLSFSSIDSNYIYVQGVDYE--VFCGQWRESSKVFAFRGDSNWL-GFSKCSNRDVLG-GWS---DSGSIFVADVVAK 357 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s~D~~--i~vwd~~~~~~~~~~~g~~~~~-~~~~~~d~~~l~-sgs---~dg~I~iWd~~~~ 357 (369)
.+.++.|++ ++.++++...|+. |.+||+.+++.+..+..+.... .+...+++..|+ +.+ ..++|+.||+.++
T Consensus 337 ~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 337 VLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred eEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 688899998 7888888888884 5667776777767776654222 233345666544 333 3479999999887
Q ss_pred c
Q 017601 358 E 358 (369)
Q Consensus 358 ~ 358 (369)
+
T Consensus 416 ~ 416 (710)
T 2xdw_A 416 E 416 (710)
T ss_dssp S
T ss_pred c
Confidence 6
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.36 E-value=6.1e-11 Score=110.77 Aligned_cols=242 Identities=12% Similarity=-0.010 Sum_probs=136.8
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE--
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA-- 167 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~-- 167 (369)
+|...+..++|+||+ ..|+..+.++.+++||+.++.. ...+.. +... .......++|++. .++..
T Consensus 78 ~~~~~~~~~~~spdg----~~l~~~~~~~~l~~~d~~~g~~---~~~~~~--~~~~---~~~~~~~~~~dg~-~l~~~~~ 144 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDD----DALFYVKDGRNLMRVDLATLEE---NVVYQV--PAEW---VGYGTWVANSDCT-KLVGIEI 144 (388)
T ss_dssp SSCBCSSSCEECTTS----SEEEEEETTTEEEEEETTTCCE---EEEEEC--CTTE---EEEEEEEECTTSS-EEEEEEE
T ss_pred CCCCCccceEEcCCC----CEEEEEeCCCeEEEEECCCCcc---eeeeec--hhhc---ccccceeECCCCC-eeccccc
Confidence 455555678899984 6788877788999999986521 001111 1000 0001233577544 44421
Q ss_pred -------------------ecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCC-CCCcEEEEEcC------CeEE
Q 017601 168 -------------------RSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVN-GGPNMLAVTEG------CQLT 220 (369)
Q Consensus 168 -------------------~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~~lla~s~d------~~v~ 220 (369)
...+..|.+||... ..+.+.. +...+.... ++| |+..|+.++.+ ..|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~--~~~~~~~~~---~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 145 RREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ--ENQWLGHPI---YRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE--ESSCEEEEE---EETTEEEEEEEEECSCTTTSSCSEE
T ss_pred cCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec--CCccccccE---ECCCCCCEEEEEEecCCCCCcceEE
Confidence 12446789999753 3333322 222222222 346 66677776653 3778
Q ss_pred EEeCCcccCCceeeeeeccCC-CcEEEEEECCCC-cEEEEeC--C---CcEEEEeCCCcee--eeeccccccCc---eEE
Q 017601 221 IWDLRMKENGGCLHRICGSVG-DILYAVCSSSTG-NIAVAGA--D---RTVTIYDPRRWSA--LSRWVHCSKYE---ITG 288 (369)
Q Consensus 221 iwD~~~~~~~~~~~~~~~~~~-~~v~~v~~sp~g-~lasgs~--D---~~v~vwD~~~~~~--~~~~~~h~~~~---v~~ 288 (369)
++|...+ ....+..+.. ..+...+|+||| .|+..+. + ..|.+||+.+++. +..+.++ ... ...
T Consensus 220 ~~d~~~~----~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~ 294 (388)
T 3pe7_A 220 LINEDGT----NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC-SHLMSNYDG 294 (388)
T ss_dssp EEETTSC----CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE-EEEEECTTS
T ss_pred EEeCCCC----ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc-eeeeecCCC
Confidence 8887654 2333333211 357888999999 6655443 2 2399999998764 3344432 111 222
Q ss_pred EEEcCCCCCEEEEE---------ECCCeEEEEECcCCceeEEEEcCCC-----------eeeeeEcCCCCEEEEEe-CCC
Q 017601 289 LSFSSIDSNYIYVQ---------GVDYEVFCGQWRESSKVFAFRGDSN-----------WLGFSKCSNRDVLGGWS-DSG 347 (369)
Q Consensus 289 l~~sp~d~~~l~s~---------s~D~~i~vwd~~~~~~~~~~~g~~~-----------~~~~~~~~d~~~l~sgs-~dg 347 (369)
+.|+| ||+.|+.. ..+..|++||+.+++.......... ......++||+.|+..+ .+|
T Consensus 295 ~~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g 373 (388)
T 3pe7_A 295 SLMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG 373 (388)
T ss_dssp SEEEE-EECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS
T ss_pred CeEcc-CCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC
Confidence 47999 99987754 4567999999998765443322221 12334467998777655 577
Q ss_pred cEEEEECC
Q 017601 348 SIFVADVV 355 (369)
Q Consensus 348 ~I~iWd~~ 355 (369)
...+|.+.
T Consensus 374 ~~~l~~~~ 381 (388)
T 3pe7_A 374 KPALYLAT 381 (388)
T ss_dssp SCEEEEEE
T ss_pred ceeEEEEE
Confidence 77777654
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=2.6e-10 Score=102.32 Aligned_cols=181 Identities=11% Similarity=-0.010 Sum_probs=130.9
Q ss_pred eeEEEEecccceEEEEeCC--cceEEEEeee--CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 162 SMAAVARSFSKSIDVYDQD--IHLRTLRTLW--YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
.+++++ +.++.|.+||.. +.+..+.... .+..+.+. |+++.++ +.++.|..||. ++ +.+.++.
T Consensus 6 ~~lv~~-~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~------pdG~ilv--s~~~~V~~~d~-~G---~~~W~~~ 72 (276)
T 3no2_A 6 HLLVGG-SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAAT------KAGEILF--SYSKGAKMITR-DG---RELWNIA 72 (276)
T ss_dssp EEEEEC-TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEEC------TTSCEEE--ECBSEEEEECT-TS---CEEEEEE
T ss_pred cEEEee-CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEEC------CCCCEEE--eCCCCEEEECC-CC---CEEEEEc
Confidence 466666 899999999973 4444443321 22333332 4454444 56788999998 67 6777776
Q ss_pred ccCCCcEEEEEECCCC-cEEEEeC-CCcEEEEeCCCceeeeecc------ccccCceEEEEEcCCCCCEEEEEECCCeEE
Q 017601 238 GSVGDILYAVCSSSTG-NIAVAGA-DRTVTIYDPRRWSALSRWV------HCSKYEITGLSFSSIDSNYIYVQGVDYEVF 309 (369)
Q Consensus 238 ~~~~~~v~~v~~sp~g-~lasgs~-D~~v~vwD~~~~~~~~~~~------~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~ 309 (369)
......+.++.+.|+| .+++.+. ++.|..+|. +++.+.++. ++ ......+++.+ +++++++.+.++.|.
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~-~~~~~~v~~~~-~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERP-HAQFRQINKNK-KGNYLVPLFATSEVR 149 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSG-GGSCSCCEECT-TSCEEEEETTTTEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcc-cccccCceECC-CCCEEEEecCCCEEE
Confidence 5313578999999999 7777776 778888885 677665553 22 23456678899 999999999999999
Q ss_pred EEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 310 CGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 310 vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+||.+ ++.+..+.......+....+++.++++++.++.|..+|..+|+.
T Consensus 150 ~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred EECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 99998 99999887643223444566899999999999999999987764
No 180
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.32 E-value=1.6e-09 Score=97.87 Aligned_cols=243 Identities=8% Similarity=0.010 Sum_probs=145.2
Q ss_pred ceeeEEEEeecCCCCceEEEE-------EecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 93 SEVQSIALAETDSSGYMVLGS-------VDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las-------~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
....+++|++++ .+.++ ...++.|+.|+..++. ...+.. +...+. .....++++++++..+++
T Consensus 18 ~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~~i~~~d~~~g~----~~~~~~-~~~~~~-~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 18 PGAEGPVFDKNG----DFYIVAPEVEVNGKPAGEILRIDLKTGK----KTVICK-PEVNGY-GGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp TTCEEEEECTTS----CEEEEETTCEETTEECCEEEEECTTTCC----EEEEEC-CEETTE-ECCEEEEEECSSSSEEEE
T ss_pred CCccCceECCCC----CEEEEEeccccCCCCCCEEEEEeCCCCc----EEEEEe-cccCCC-CCCCceEEEecCCCcEEE
Confidence 345789998763 45544 3556789999865431 111111 000000 123558999995244555
Q ss_pred EEecccceEEEEeCCcceEEE-EeeeCC---cceeeeccCCCCCCCCcEEEEEcC---------------CeEEEEeCCc
Q 017601 166 VARSFSKSIDVYDQDIHLRTL-RTLWYP---SSLNFVQNLSPVNGGPNMLAVTEG---------------CQLTIWDLRM 226 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~~~~~-~~~~~~---~~v~~~~~~~~~~~~~~lla~s~d---------------~~v~iwD~~~ 226 (369)
+. . ...|.+||.......+ ...... ..+..+. +++++..+++...+ +.|..||..
T Consensus 88 ~~-~-~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~---~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 88 AD-M-RLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCA---FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EE-T-TTEEEEEETTSCEEECCSBCTTSCBCBCCCEEE---ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EE-C-CCCEEEEeCCCCEEEEEeccCCCccccCCcCEE---ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 44 3 3478889876333222 111000 1111221 23455455554444 567777765
Q ss_pred ccCCceeeeeeccCCCcEEEEEEC----CCC-cEEE-EeCCCcEEEEeCC-Cce-----eeeecccccc-CceEEEEEcC
Q 017601 227 KENGGCLHRICGSVGDILYAVCSS----STG-NIAV-AGADRTVTIYDPR-RWS-----ALSRWVHCSK-YEITGLSFSS 293 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~s----p~g-~las-gs~D~~v~vwD~~-~~~-----~~~~~~~h~~-~~v~~l~~sp 293 (369)
+ +........ ...+.++|+ |++ .|.. ...++.|.+||+. +++ ....+.++ . ..+..+++++
T Consensus 162 g---~~~~~~~~~--~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~-~~~~p~~i~~d~ 235 (314)
T 1pjx_A 162 G---QMIQVDTAF--QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT-HEGGADGMDFDE 235 (314)
T ss_dssp S---CEEEEEEEE--SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC-SSCEEEEEEEBT
T ss_pred C---CEEEeccCC--CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC-CCCCCCceEECC
Confidence 3 333323332 557889999 999 5544 4568899999976 343 23344444 3 5688999999
Q ss_pred CCCCEEEEEECCCeEEEEECcCCceeEEEEcCC-CeeeeeEcCCCC-EEEEEeCCCcEEEEECCCCc
Q 017601 294 IDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS-NWLGFSKCSNRD-VLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 294 ~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~-~~~~~~~~~d~~-~l~sgs~dg~I~iWd~~~~~ 358 (369)
+|+++++...++.|.+||.++++....+..+. ...++...+++. ++++...++.|..|++....
T Consensus 236 -~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 236 -DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp -TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred -CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 99999988889999999998777767776553 223444456888 55566667899999987643
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=1.4e-10 Score=117.58 Aligned_cols=244 Identities=9% Similarity=-0.018 Sum_probs=142.0
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecC----CcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSY----GHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~----g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
+|...+.+++||||+ ..+..+.+.. ..|++||+.++.. .. ...+. .. ...+++|+|++. .|+
T Consensus 118 ~~~~~~~~~~~SPDG---~~la~~~~~~G~~~~~i~v~dl~tg~~-~~--~~~~~----~~---~~~~~~wspDg~-~l~ 183 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG---KKVAFAQKPNAADEAVLHVIDVDSGEW-SK--VDVIE----GG---KYATPKWTPDSK-GFY 183 (695)
T ss_dssp SSCEEEEEEEECTTS---SEEEEEEEETTCSCCEEEEEETTTCCB-CS--SCCBS----CC---TTCCCEECTTSS-EEE
T ss_pred CCCEEEEEEEECCCC---CEEEEEECCCCCceEEEEEEECCCCCC-cC--CcccC----cc---cccceEEecCCC-EEE
Confidence 567789999999985 2333344433 5799999986521 10 00111 00 013689999655 555
Q ss_pred EEecccce-------------EEEEeCCcce---EEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCC----eEEEEeC
Q 017601 166 VARSFSKS-------------IDVYDQDIHL---RTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGC----QLTIWDL 224 (369)
Q Consensus 166 ~~~s~d~~-------------i~lwd~~~~~---~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~----~v~iwD~ 224 (369)
.+ +.|.. |.+|+++... ..+... .++..+.... +++|+..|+..+.++ .|.+||.
T Consensus 184 ~~-~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~---~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 184 YE-WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD---LSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp EE-ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE---ECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred EE-EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE---ECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 55 45554 9999986322 122111 1222222222 346787888776555 6777765
Q ss_pred CcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe---CCCcEEEEeCCCcee--eeeccccc-cCceEEEEEcCCCCC
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG---ADRTVTIYDPRRWSA--LSRWVHCS-KYEITGLSFSSIDSN 297 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs---~D~~v~vwD~~~~~~--~~~~~~h~-~~~v~~l~~sp~d~~ 297 (369)
.++ . ...+..+ ...+....| ++| +++... .++.|.+||+.+++. ...+..|. ...+.+++|+ ++.
T Consensus 260 ~~~---~-~~~l~~~-~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~ 331 (695)
T 2bkl_A 260 GEK---D-FRLLVKG-VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGH 331 (695)
T ss_dssp TCS---S-CEEEEEC-SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTE
T ss_pred CCC---c-eEEeecC-CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCE
Confidence 444 2 3334333 244555556 566 444444 358899999987653 23444331 3457888887 467
Q ss_pred EEEEEECCCeEEEEECc-CCceeEEEEcC-CCe-eeeeEcCCCCEEE----EEeCCCcEEEEECCCCcc
Q 017601 298 YIYVQGVDYEVFCGQWR-ESSKVFAFRGD-SNW-LGFSKCSNRDVLG----GWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 298 ~l~s~s~D~~i~vwd~~-~~~~~~~~~g~-~~~-~~~~~~~d~~~l~----sgs~dg~I~iWd~~~~~~ 359 (369)
++++...|+..++|.+. .++....+..+ ... ..+...++++.|+ +....++|++||+.+++.
T Consensus 332 lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 332 LSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 88889999998888765 35555555444 211 1222245776665 333457899999988763
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.28 E-value=8.3e-09 Score=94.27 Aligned_cols=240 Identities=7% Similarity=-0.084 Sum_probs=140.5
Q ss_pred CCccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 89 CPHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 89 ~~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
..+...+.+++|++++ .+.++...++.|++|+..++. ...+.. .. ...+.+++|+|++ .+++++
T Consensus 41 ~~~~~~~~~~~~~~~g----~l~~~~~~~~~i~~~d~~~~~----~~~~~~-~~-----~~~~~~i~~~~dg-~l~v~~- 104 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQG----QLFLLDVFEGNIFKINPETKE----IKRPFV-SH-----KANPAAIKIHKDG-RLFVCY- 104 (333)
T ss_dssp ESSCCCEEEEEECTTS----CEEEEETTTCEEEEECTTTCC----EEEEEE-CS-----SSSEEEEEECTTS-CEEEEE-
T ss_pred eccCccccCcEECCCC----CEEEEECCCCEEEEEeCCCCc----EEEEee-CC-----CCCcceEEECCCC-cEEEEe-
Confidence 3455667899999873 466666677889999876441 111110 11 1235689999954 455554
Q ss_pred ccc----ceEEEEeCCcc-eEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEc------CCeEEEEeCCcccCCceeeee
Q 017601 169 SFS----KSIDVYDQDIH-LRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTE------GCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 169 s~d----~~i~lwd~~~~-~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~------d~~v~iwD~~~~~~~~~~~~~ 236 (369)
..+ +.|.+||.... ...+.. ......+..+. +++++..+++... .+.|..||..++ +.....
T Consensus 105 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~---~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~---~~~~~~ 178 (333)
T 2dg1_A 105 LGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMV---FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR---TVTPII 178 (333)
T ss_dssp CTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEE---ECTTSCEEEEECCCBTTBCCEEEEEECTTSC---CEEEEE
T ss_pred CCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceE---ECCCCCEEEEeccccccCCCceEEEEeCCCC---EEEEee
Confidence 445 68999987532 221111 11111222222 2355544444432 245666666544 222222
Q ss_pred eccCCCcEEEEEECCCC-cEE-EEeCCCcEEEEeCCC-ceeee--------eccccccCceEEEEEcCCCCCEEEEEECC
Q 017601 237 CGSVGDILYAVCSSSTG-NIA-VAGADRTVTIYDPRR-WSALS--------RWVHCSKYEITGLSFSSIDSNYIYVQGVD 305 (369)
Q Consensus 237 ~~~~~~~v~~v~~sp~g-~la-sgs~D~~v~vwD~~~-~~~~~--------~~~~h~~~~v~~l~~sp~d~~~l~s~s~D 305 (369)
... ..++.++|+|+| .|+ +.+.++.|.+||+++ +..+. .+.++ ..+..+++++ +++++++...+
T Consensus 179 ~~~--~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~-~G~l~v~~~~~ 253 (333)
T 2dg1_A 179 QNI--SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDS-DDNLYVAMYGQ 253 (333)
T ss_dssp EEE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBT-TCCEEEEEETT
T ss_pred cCC--CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECC-CCCEEEEEcCC
Confidence 222 567899999999 554 455688999999864 33222 12222 3678899999 99998888888
Q ss_pred CeEEEEECcCCceeEEEEcCCC-------eeeeeEcCCCCEEEEEeCC------CcEEEEECCC
Q 017601 306 YEVFCGQWRESSKVFAFRGDSN-------WLGFSKCSNRDVLGGWSDS------GSIFVADVVA 356 (369)
Q Consensus 306 ~~i~vwd~~~~~~~~~~~g~~~-------~~~~~~~~d~~~l~sgs~d------g~I~iWd~~~ 356 (369)
+.|.+||. .++.+..+..+.. ..++...+|+..|+.++.+ +.|+..+...
T Consensus 254 ~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 254 GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 99999998 4566666654321 1344445677666655544 3555555543
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.27 E-value=1.9e-08 Score=89.85 Aligned_cols=236 Identities=8% Similarity=-0.056 Sum_probs=146.6
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.+...+.+|++++++ .+.++....+.|..|+.. +. ...+..... .....++++++++ .++++. .
T Consensus 12 ~~~~~~~~i~~d~~g----~l~v~~~~~~~v~~~d~~-~~----~~~~~~~~~-----~~~~~~i~~~~~g-~l~v~~-~ 75 (299)
T 2z2n_A 12 NQDTGPYGITVSDKG----KVWITQHKANMISCINLD-GK----ITEYPLPTP-----DAKVMCLTISSDG-EVWFTE-N 75 (299)
T ss_dssp SSSCCEEEEEECTTS----CEEEEETTTTEEEEECTT-CC----EEEEECSST-----TCCEEEEEECTTS-CEEEEE-T
T ss_pred CcCCCccceEECCCC----CEEEEecCCCcEEEEcCC-CC----eEEecCCcc-----cCceeeEEECCCC-CEEEeC-C
Confidence 345678999998874 455554446789888866 21 111111111 1235589999854 455554 5
Q ss_pred ccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee-eeccCCCcEEEEE
Q 017601 170 FSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR-ICGSVGDILYAVC 248 (369)
Q Consensus 170 ~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~-~~~~~~~~v~~v~ 248 (369)
.++.|..||.......+...........+. +++++..+++...++.|..||. ++ +.... .... ...+++++
T Consensus 76 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~---~~~~g~l~v~~~~~~~i~~~d~-~g---~~~~~~~~~~-~~~~~~i~ 147 (299)
T 2z2n_A 76 AANKIGRITKKGIIKEYTLPNPDSAPYGIT---EGPNGDIWFTEMNGNRIGRITD-DG---KIREYELPNK-GSYPSFIT 147 (299)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEE---ECTTSCEEEEETTTTEEEEECT-TC---CEEEEECSST-TCCEEEEE
T ss_pred CCCeEEEECCCCcEEEEeCCCcCCCceeeE---ECCCCCEEEEecCCceEEEECC-CC---CEEEecCCCC-CCCCceEE
Confidence 678899998764443332111111222222 2244544555556789999998 44 22221 1112 36789999
Q ss_pred ECCCC-cEEEEeCCCcEEEEeCCCceeeee-ccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc--
Q 017601 249 SSSTG-NIAVAGADRTVTIYDPRRWSALSR-WVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG-- 324 (369)
Q Consensus 249 ~sp~g-~lasgs~D~~v~vwD~~~~~~~~~-~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g-- 324 (369)
++++| .+++...++.|..||. +++.... +..+ ...+.++++.+ +++++++...++.|.+||. +++... +..
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~ 222 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITE-SGDITEFKIPTP-ASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITE-FKIPT 222 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEE-EECSS
T ss_pred EcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEE-EECCC
Confidence 99999 6566666789999998 6554432 3344 45688999999 8998777777889999999 655332 321
Q ss_pred C-CCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 325 D-SNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 325 ~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
+ ....++...++|.++++...++.|.+||.
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 1 22234445568887777767899999998
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.25 E-value=4.2e-10 Score=104.99 Aligned_cols=236 Identities=15% Similarity=0.091 Sum_probs=133.6
Q ss_pred eEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCee-E-------------------EE
Q 017601 96 QSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWS-G-------------------LC 155 (369)
Q Consensus 96 ~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------l~ 155 (369)
..+.|+||+ ..|+....++.+++|++.++.. ...... + .+|. . ++
T Consensus 84 ~~~~~spdg----~~l~~~~~~~~l~~~d~~~~~~---~~~~~~--~------~~~~~~g~~l~~~~~~~~~~~~~~~~~ 148 (396)
T 3c5m_A 84 FGGFISTDE----RAFFYVKNELNLMKVDLETLEE---QVIYTV--D------EEWKGYGTWVANSDCTKLVGIEILKRD 148 (396)
T ss_dssp TTCEECTTS----SEEEEEETTTEEEEEETTTCCE---EEEEEC--C------TTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred ccceECCCC----CEEEEEEcCCcEEEEECCCCCc---EEEEec--c------cccCCCCCEEEeccCCccccccccccc
Confidence 347899984 5777777778899999875421 000110 0 0121 1 35
Q ss_pred ECCCCceeEEEEe----cccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCC-CCCcEEEEEcC------CeEEEEe
Q 017601 156 FSPSQWSMAAVAR----SFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVN-GGPNMLAVTEG------CQLTIWD 223 (369)
Q Consensus 156 ~~p~~~~~~a~~~----s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~~lla~s~d------~~v~iwD 223 (369)
|+|++. .++... ..+..|.+||... ....+. .+...+.... ++| ++..|+.++.+ ..|.+||
T Consensus 149 ~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~---~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 149 WQPLTS-WEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPI---YRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp CCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEE---EETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred cCCCCc-ceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccce---ECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 677443 333321 3567899999753 222222 1222222222 224 45567666643 4688888
Q ss_pred CCcccCCceeeeeeccC-CCcEEEEEECCCC-cEEEEeCC-----CcEEEEeCCCceeeeeccccccCceEEEEEcCCCC
Q 017601 224 LRMKENGGCLHRICGSV-GDILYAVCSSSTG-NIAVAGAD-----RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDS 296 (369)
Q Consensus 224 ~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g-~lasgs~D-----~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~ 296 (369)
+..+ . ...+..+. ...+..++|+|+| .|+.++.+ +.|.+||+.+++...... . . ... +.|+|.|+
T Consensus 223 ~~~~---~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~-~-~~~-~~~s~~dg 294 (396)
T 3c5m_A 223 EDGS---N-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-M-P-PCS-HLMSNFDG 294 (396)
T ss_dssp TTSC---C-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-C-C-SEE-EEEECSSS
T ss_pred CCCC---c-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-C-C-CCC-CCccCCCC
Confidence 8654 2 22222220 2368889999999 77776544 459999998876533221 1 1 123 88987678
Q ss_pred CEEEEEE----------------CCCeEEEEECcCCceeEEEEcCCC-e-----------eeeeEcCCCCEEEEEeC-CC
Q 017601 297 NYIYVQG----------------VDYEVFCGQWRESSKVFAFRGDSN-W-----------LGFSKCSNRDVLGGWSD-SG 347 (369)
Q Consensus 297 ~~l~s~s----------------~D~~i~vwd~~~~~~~~~~~g~~~-~-----------~~~~~~~d~~~l~sgs~-dg 347 (369)
++++.++ .+..|++||+.+++... +..+.. | ......+||+.|+..+. ++
T Consensus 295 ~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~ 373 (396)
T 3c5m_A 295 SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG 373 (396)
T ss_dssp SEEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS
T ss_pred ceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC
Confidence 8888765 34789999998876543 333321 1 12344678988776665 55
Q ss_pred cEEEE--ECCCCcchh
Q 017601 348 SIFVA--DVVAKENEI 361 (369)
Q Consensus 348 ~I~iW--d~~~~~~~~ 361 (369)
...+| ++.+++..+
T Consensus 374 ~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 374 VPAIYIADVPESYKHL 389 (396)
T ss_dssp SCEEEEEECCTTCC--
T ss_pred CceEEEEEEccccccc
Confidence 54444 555655433
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=2.5e-09 Score=95.84 Aligned_cols=212 Identities=9% Similarity=0.028 Sum_probs=140.1
Q ss_pred ceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCC-cceEEE
Q 017601 108 YMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQD-IHLRTL 186 (369)
Q Consensus 108 ~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~~~~~~ 186 (369)
..++++.+.++.|.+||..++. ..+.+..+.. ....++++.|++ .+++ + .++.|..||.. +.+..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~-----~~w~~~~~~~----~~~~~~~~~pdG-~ilv-s--~~~~V~~~d~~G~~~W~~ 71 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKE-----IVWEYPLEKG----WECNSVAATKAG-EILF-S--YSKGAKMITRDGRELWNI 71 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTE-----EEEEEECCTT----CCCCEEEECTTS-CEEE-E--CBSEEEEECTTSCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCe-----EEEEeCCCcc----CCCcCeEECCCC-CEEE-e--CCCCEEEECCCCCEEEEE
Confidence 3688888899999999986541 1233322210 112368999954 4555 3 46789999974 444444
Q ss_pred EeeeCCcceeeeccCCCCCCCCcEEEEEc-CCeEEEEeCCcccCCceeeeeeccC-----CCcEEEEEECCCC-cEEEEe
Q 017601 187 RTLWYPSSLNFVQNLSPVNGGPNMLAVTE-GCQLTIWDLRMKENGGCLHRICGSV-----GDILYAVCSSSTG-NIAVAG 259 (369)
Q Consensus 187 ~~~~~~~~v~~~~~~~~~~~~~~lla~s~-d~~v~iwD~~~~~~~~~~~~~~~~~-----~~~v~~v~~sp~g-~lasgs 259 (369)
... ....+.... ..+++..+++.+. ++.|..+|. ++ +.+..+.... ......+++.++| ++++..
T Consensus 72 ~~~-~~~~~~~~~---~~~dG~~lv~~~~~~~~v~~vd~-~G---k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 72 AAP-AGCEMQTAR---ILPDGNALVAWCGHPSTILEVNM-KG---EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp ECC-TTCEEEEEE---ECTTSCEEEEEESTTEEEEEECT-TS---CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred cCC-CCccccccE---ECCCCCEEEEecCCCCEEEEEeC-CC---CEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 331 111222222 2246777777676 777888875 45 5555543210 1234556789999 899999
Q ss_pred CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC----C--e-eeee
Q 017601 260 ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS----N--W-LGFS 332 (369)
Q Consensus 260 ~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~----~--~-~~~~ 332 (369)
.++.|.+||.. ++.+.++... ....++.+.+ +++++++++.+++|..+|..+++.+..+..+. + + .++.
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~--~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~ 219 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLS--GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF 219 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECS--SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEE
T ss_pred CCCEEEEECCC-CCEEEEEECC--CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccce
Confidence 99999999987 9988887754 3466788888 99999998888899999999999988886431 1 1 2222
Q ss_pred EcCCCCEEEEEe
Q 017601 333 KCSNRDVLGGWS 344 (369)
Q Consensus 333 ~~~d~~~l~sgs 344 (369)
..++|.++++.+
T Consensus 220 ~~~~G~i~v~~~ 231 (276)
T 3no2_A 220 PLQNGGLYICNW 231 (276)
T ss_dssp ECTTSCEEEEEE
T ss_pred EcCCCCEEEEec
Confidence 345888887774
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.24 E-value=4.6e-08 Score=87.33 Aligned_cols=236 Identities=6% Similarity=-0.061 Sum_probs=141.3
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
...+.+|++++++ .+.++....+.|+.|+.+.. ...+.+.. ......++++.|+ +.++++. ..+
T Consensus 56 ~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~~g~-----~~~~~~~~-----~~~~~~~i~~~~~-g~l~v~~-~~~ 119 (299)
T 2z2n_A 56 DAKVMCLTISSDG----EVWFTENAANKIGRITKKGI-----IKEYTLPN-----PDSAPYGITEGPN-GDIWFTE-MNG 119 (299)
T ss_dssp TCCEEEEEECTTS----CEEEEETTTTEEEEECTTSC-----EEEEECSS-----TTCCEEEEEECTT-SCEEEEE-TTT
T ss_pred cCceeeEEECCCC----CEEEeCCCCCeEEEECCCCc-----EEEEeCCC-----cCCCceeeEECCC-CCEEEEe-cCC
Confidence 4678899998873 45555555678888876511 11121110 1123457999984 4455554 567
Q ss_pred ceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee-eeccCCCcEEEEEEC
Q 017601 172 KSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR-ICGSVGDILYAVCSS 250 (369)
Q Consensus 172 ~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~-~~~~~~~~v~~v~~s 250 (369)
+.|..||.......+...........+. +++++..+++...++.|..||. ++ +.... +... ...+.+++++
T Consensus 120 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~---~~~~g~l~v~~~~~~~i~~~~~-~g---~~~~~~~~~~-~~~~~~i~~~ 191 (299)
T 2z2n_A 120 NRIGRITDDGKIREYELPNKGSYPSFIT---LGSDNALWFTENQNNAIGRITE-SG---DITEFKIPTP-ASGPVGITKG 191 (299)
T ss_dssp TEEEEECTTCCEEEEECSSTTCCEEEEE---ECTTSCEEEEETTTTEEEEECT-TC---CEEEEECSST-TCCEEEEEEC
T ss_pred ceEEEECCCCCEEEecCCCCCCCCceEE---EcCCCCEEEEeCCCCEEEEEcC-CC---cEEEeeCCCC-CCcceeEEEC
Confidence 8899999754443332211111222222 2244544444445789999998 54 33221 2222 3568899999
Q ss_pred CCC-cEEEEeCCCcEEEEeCCCceeee-eccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE--cC-
Q 017601 251 STG-NIAVAGADRTVTIYDPRRWSALS-RWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR--GD- 325 (369)
Q Consensus 251 p~g-~lasgs~D~~v~vwD~~~~~~~~-~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~--g~- 325 (369)
++| ++++...++.|.+||. +++... .+..+ ...+.++++++ +++++++...++.|..||. +++ ...+. ++
T Consensus 192 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~ 266 (299)
T 2z2n_A 192 NDDALWFVEIIGNKIGRITT-SGEITEFKIPTP-NARPHAITAGA-GIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKS 266 (299)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECS-TTCEEEEETTTTEEEEEET-TTE-EEEEECSSSS
T ss_pred CCCCEEEEccCCceEEEECC-CCcEEEEECCCC-CCCceeEEECC-CCCEEEeccCCceEEEECC-CCc-eEEEeCCCCC
Confidence 999 5555556889999998 655432 23334 56789999999 8987777667899999998 343 33332 21
Q ss_pred CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 326 SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 326 ~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
....++.. +++.++++.+ .+.|..++.++++
T Consensus 267 ~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 267 AEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 12234455 6777777665 5677777776553
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.22 E-value=5.6e-09 Score=95.82 Aligned_cols=221 Identities=11% Similarity=0.037 Sum_probs=128.2
Q ss_pred ceeeEEEEeecCCCCceEEEEEec-----CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDS-----YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~-----~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
..+..++||||+ ..|+.... ...|++|++..+. ...+... .. +.+++|+|++. .|+.+
T Consensus 59 ~~~~~~~~SpDg----~~la~~~~~~~~~~~~l~~~~~~~g~------~~~l~~~-----~~-~~~~~wspdg~-~l~~~ 121 (347)
T 2gop_A 59 ENATMPRISPDG----KKIAFMRANEEKKVSEIWVADLETLS------SKKILEA-----KN-IRSLEWNEDSR-KLLIV 121 (347)
T ss_dssp ESCEEEEECTTS----SEEEEEEEETTTTEEEEEEEETTTTE------EEEEEEE-----SE-EEEEEECTTSS-EEEEE
T ss_pred ccCCCeEECCCC----CEEEEEEeccCCCcceEEEEECCCCc------eEEEEcC-----CC-ccceeECCCCC-EEEEE
Confidence 567889999985 44544432 2247888776431 1111111 01 45799999655 45554
Q ss_pred ecc--------------------------cceEEEEeCCc-ce-EEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC---
Q 017601 168 RSF--------------------------SKSIDVYDQDI-HL-RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG--- 216 (369)
Q Consensus 168 ~s~--------------------------d~~i~lwd~~~-~~-~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d--- 216 (369)
+.. ...|.+||... .. +.+.. .....+.+. |++ .++++..+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~s------pdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 122 GFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-PRFSSGIWH------RDK-IVVNVPHREII 193 (347)
T ss_dssp EECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-ETTCEEEEE------TTE-EEEEEECCCSS
T ss_pred EccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-CCcccccCC------CCe-EEEEEeccccc
Confidence 222 35788898753 22 34433 222233332 455 44444433
Q ss_pred ---C-eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCC--------CcEEEEeCCCceeeeecccccc
Q 017601 217 ---C-QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD--------RTVTIYDPRRWSALSRWVHCSK 283 (369)
Q Consensus 217 ---~-~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D--------~~v~vwD~~~~~~~~~~~~h~~ 283 (369)
. ...||.+.++ ....+..+ ..+.++ +|+| .|+.++.+ ..|.+|| +++......+| .
T Consensus 194 ~~~~~~~~l~~~d~~----~~~~l~~~--~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~-~ 262 (347)
T 2gop_A 194 PQYFKFWDIYIWEDG----KEEKMFEK--VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEV-D 262 (347)
T ss_dssp CCSSCCEEEEEEETT----EEEEEEEE--ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTC-C
T ss_pred ccccccccEEEeCCC----ceEEeccC--cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccC-C
Confidence 2 4455544433 33334332 334444 9999 88777654 3688888 55554445566 7
Q ss_pred CceEE-EEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcE-EEEECC
Q 017601 284 YEITG-LSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSI-FVADVV 355 (369)
Q Consensus 284 ~~v~~-l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I-~iWd~~ 355 (369)
..+.. +.|+ |+ ++++++.|+.+++| +.+++....+.+......+...+ .++++++.++.. .+|.+.
T Consensus 263 ~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 263 RGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 78886 8998 67 88999999999999 88665544444332222333344 788888877765 777665
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.21 E-value=1.3e-09 Score=101.47 Aligned_cols=205 Identities=6% Similarity=-0.080 Sum_probs=128.8
Q ss_pred ceeeEEEEeecCCCCceEEEEEe--cCCcEEEEEecCCCCCCcccccc-ccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 93 SEVQSIALAETDSSGYMVLGSVD--SYGHLIVSKLDTSGKDVDRLTYS-VLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d--~~g~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
.....++|+||+ ..|+... ..+.|.+||+.+... ... +.. ++..++.+.|.+...+++. +
T Consensus 108 ~~p~~i~~spdg----~~l~v~n~~~~~~v~v~d~~~~~~-----~~~~i~~-------~~~~~v~~~p~~~~~~~~~-~ 170 (361)
T 2oiz_A 108 NYDGLFRQTTDG----KFIVLQNASPATSIGIVDVAKGDY-----VEDVTAA-------AGCWSVIPQPNRPRSFMTI-C 170 (361)
T ss_dssp CCGGGEEECTTS----SEEEEEEESSSEEEEEEETTTTEE-----EEEEGGG-------TTEEEEEECTTSSSEEEEE-E
T ss_pred CCcceEEECCCC----CEEEEECCCCCCeEEEEECCCCcE-----EEEEecC-------CCcceeEEcCCCCeeEEEE-C
Confidence 456789999985 4554443 357899999875411 111 110 1112467788665566666 7
Q ss_pred ccceEEEEeCCc---ceEEEEe--eeCC-cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC---
Q 017601 170 FSKSIDVYDQDI---HLRTLRT--LWYP-SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV--- 240 (369)
Q Consensus 170 ~d~~i~lwd~~~---~~~~~~~--~~~~-~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~--- 240 (369)
.|+.+.+|+... .....+. ..++ ....++. ..+++..++..+.+++|.++|+.... ...+..+....
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~v~v~d~~~~~-~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA---PALDKDKAHFVSYYGNVYSADFSGDE-VKVDGPWSLLNDED 246 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC---CEECSSEEEEEBTTSEEEEEECSSSS-CEEEEEEESCCHHH
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE---ecccCCEEEEEeCCCeEEEEEecCCC-ceecccccccCccc
Confidence 889998887532 2211110 0011 0000111 12345567777888999999997541 11222221100
Q ss_pred ---C---CcEEEEEECCCC-cEEEEeC-----------CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEE
Q 017601 241 ---G---DILYAVCSSSTG-NIAVAGA-----------DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 241 ---~---~~v~~v~~sp~g-~lasgs~-----------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
. .....++|+|++ +++++.. .++|.+||+.+++.+.++..+ . +.+++|+| |+++|+++
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-~--p~~ia~sp-dg~~l~v~ 322 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-D--ALSMTIDQ-QRNLMLTL 322 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-T--CCEEEEET-TTTEEEEE
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-C--eeEEEECC-CCCEEEEe
Confidence 0 111126899998 5555432 358999999999999999988 5 99999999 99999988
Q ss_pred ECCCeEEEEECcCC--ceeEEEE
Q 017601 303 GVDYEVFCGQWRES--SKVFAFR 323 (369)
Q Consensus 303 s~D~~i~vwd~~~~--~~~~~~~ 323 (369)
+. ++|.+||..++ +.+..+.
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~i~ 344 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRTIE 344 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEEET
T ss_pred CC-CeEEEEECCCCcceeeEEec
Confidence 86 99999999999 8888873
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=1.5e-09 Score=97.66 Aligned_cols=188 Identities=12% Similarity=-0.017 Sum_probs=119.2
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCce
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~ 232 (369)
+++|+|++..+++++ ..++.|..||.....+.+.. ....+..+. +++++..+++...++.|.+||.+++ +.
T Consensus 32 g~~~d~~g~~l~~~~-~~~~~i~~~~~~~~~~~~~~--~~~~~~~l~---~~~dg~l~v~~~~~~~i~~~d~~~g---~~ 102 (296)
T 3e5z_A 32 GPVYVPARSAVIFSD-VRQNRTWAWSDDGQLSPEMH--PSHHQNGHC---LNKQGHLIACSHGLRRLERQREPGG---EW 102 (296)
T ss_dssp EEEEEGGGTEEEEEE-GGGTEEEEEETTSCEEEEES--SCSSEEEEE---ECTTCCEEEEETTTTEEEEECSTTC---CE
T ss_pred CCeEeCCCCEEEEEe-CCCCEEEEEECCCCeEEEEC--CCCCcceee---ECCCCcEEEEecCCCeEEEEcCCCC---cE
Confidence 799999665567776 78899999998654433322 222222222 2345544444445689999999776 33
Q ss_pred eeeeec---cCCCcEEEEEECCCC-cEEE----Ee-------------CCCcEEEEeCCCceeeeeccccccCceEEEEE
Q 017601 233 LHRICG---SVGDILYAVCSSSTG-NIAV----AG-------------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSF 291 (369)
Q Consensus 233 ~~~~~~---~~~~~v~~v~~sp~g-~las----gs-------------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~ 291 (369)
...... .....++.++++|+| ++++ |. ..+.|..+|.. ++ +..+..+ ......++|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~-~~~~~gi~~ 179 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRD-RVKPNGLAF 179 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECC-CSSEEEEEE
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecC-CCCCccEEE
Confidence 222111 102356789999999 6665 32 13456666654 33 3444555 567899999
Q ss_pred cCCCCCEEEEEECCCeEEEEECc-CCce---eEEEEcCC-CeeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 292 SSIDSNYIYVQGVDYEVFCGQWR-ESSK---VFAFRGDS-NWLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 292 sp~d~~~l~s~s~D~~i~vwd~~-~~~~---~~~~~g~~-~~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
+| +++.+++.+.++.|++||+. ++.. ...+..+. ...++...++|.++++. ++.|++||..
T Consensus 180 s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 180 LP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 99 99998777788999999997 4444 33442111 11345556688877766 8899999986
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=2.3e-08 Score=98.55 Aligned_cols=228 Identities=10% Similarity=-0.044 Sum_probs=147.2
Q ss_pred ceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCC----cce
Q 017601 108 YMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQD----IHL 183 (369)
Q Consensus 108 ~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~----~~~ 183 (369)
..++++...++.|.++|..+... ...+.. +. ...+++|+|++. ++.++ +.|+.|.+||.. +.+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v-----~~~i~~-----g~-~p~~v~~SpDGr-~lyv~-~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEI-----KTVLDT-----GY-AVHISRLSASGR-YLFVI-GRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCE-----EEEEEC-----SS-CEEEEEECTTSC-EEEEE-ETTSEEEEEETTSSSCCEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeE-----EEEEeC-----CC-CccceEECCCCC-EEEEE-cCCCeEEEEECCCCCCcEe
Confidence 35666777789999999875511 111110 01 122799999554 55566 678999999984 233
Q ss_pred EEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCceeeeeeccC----------CCcEEEEEECCC
Q 017601 184 RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCLHRICGSV----------GDILYAVCSSST 252 (369)
Q Consensus 184 ~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~~~~~~~~----------~~~v~~v~~sp~ 252 (369)
..+.....+..+.+.... .||+.+++++. .+++|.++|..+. +.++++.... ...+.++.++++
T Consensus 234 ~~i~~G~~P~~ia~s~~~--~pDGk~l~v~n~~~~~v~ViD~~t~---~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 234 AEIKIGSEARSIETSKME--GWEDKYAIAGAYWPPQYVIMDGETL---EPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp EEEECCSEEEEEEECCST--TCTTTEEEEEEEETTEEEEEETTTC---CEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred EEEecCCCCceeEEcccc--CCCCCEEEEEEccCCeEEEEECCCC---cEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 334333334444443100 03566666655 4799999999887 6766654210 126788999998
Q ss_pred C--cEEEEeCCCcEEEEeCCCceee--eeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCCceeEEEEc---
Q 017601 253 G--NIAVAGADRTVTIYDPRRWSAL--SRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRESSKVFAFRG--- 324 (369)
Q Consensus 253 g--~lasgs~D~~v~vwD~~~~~~~--~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~~~~~~~~g--- 324 (369)
+ .++.-..+|.|.++|....+.+ ..+ .. ......+.|+| ++++++++. .++.|.++|+.+++....+.-
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~-~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~ 385 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDLNNLKTTEI-SA-ERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ 385 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEE-EC-CSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEEEecCCCeEEEEecCCCccceeeee-ec-cccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc
Confidence 8 6666677899999998764322 222 22 34567889999 999987765 578999999999988777653
Q ss_pred --CC-CeeeeeEcCC-CCEEEEEe-CCCcEEEEECCCC
Q 017601 325 --DS-NWLGFSKCSN-RDVLGGWS-DSGSIFVADVVAK 357 (369)
Q Consensus 325 --~~-~~~~~~~~~d-~~~l~sgs-~dg~I~iWd~~~~ 357 (369)
|. +...+ ..++ +.+.++.. .++.|.++|..++
T Consensus 386 ~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 386 TPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 21 11222 2444 45555554 4689999999873
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.16 E-value=7.3e-09 Score=95.06 Aligned_cols=186 Identities=11% Similarity=-0.012 Sum_probs=130.2
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccC
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKEN 229 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~ 229 (369)
++++. +..++++. ..++.|.+||.. +.+..+.....+..+.+.. ++ .+..+. .++.|.+||..++
T Consensus 48 ~i~~~--~~~lyv~~-~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~------~g-~lyv~~~~~~~v~~iD~~t~-- 115 (328)
T 3dsm_A 48 SMVIR--DGIGWIVV-NNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS------DE-KAYVTQIWDYRIFIINPKTY-- 115 (328)
T ss_dssp EEEEE--TTEEEEEE-GGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE------TT-EEEEEEBSCSEEEEEETTTT--
T ss_pred EEEEE--CCEEEEEE-cCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC------CC-eEEEEECCCCeEEEEECCCC--
Confidence 57774 34555655 678999999985 4445554334455555533 34 555544 6899999999987
Q ss_pred CceeeeeeccCCC------cEEEEEECCCCcEEEEe--CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEE
Q 017601 230 GGCLHRICGSVGD------ILYAVCSSSTGNIAVAG--ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 230 ~~~~~~~~~~~~~------~v~~v~~sp~g~lasgs--~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s 301 (369)
+....+... . ....+++ .++.|.++. .+++|.+||+++++.+.++... .....+.++| +++++++
T Consensus 116 -~~~~~i~~g--~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~-dG~l~v~ 188 (328)
T 3dsm_A 116 -EITGYIECP--DMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG--IQPTSLVMDK-YNKMWTI 188 (328)
T ss_dssp -EEEEEEECT--TCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS--SCBCCCEECT-TSEEEEE
T ss_pred -eEEEEEEcC--CccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC--CCccceEEcC-CCCEEEE
Confidence 666666543 3 5667777 445444444 4899999999999888777643 3457899999 9988777
Q ss_pred EECC----------CeEEEEECcCCceeEEEEcC--CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 302 QGVD----------YEVFCGQWRESSKVFAFRGD--SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 302 ~s~D----------~~i~vwd~~~~~~~~~~~g~--~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+..+ +.|.++|..+++....+.-. ....++...++++.|+.... .|++||.++++.
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 6655 79999999998877776521 11156666778888887765 999999988763
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.15 E-value=4.5e-10 Score=105.12 Aligned_cols=182 Identities=13% Similarity=0.144 Sum_probs=117.5
Q ss_pred eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccC-CCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLP-QDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
.++.|++++.. .+++++..+ .+.+|++....+-+......+.+ ....+. ++..++| ++..++++ .++
T Consensus 39 ~~nlLais~~~----gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp--~V~~l~f---d~~~L~v~--~~~ 106 (388)
T 1xip_A 39 SLQNLDISNSK----SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP--DVIFVCF---HGDQVLVS--TRN 106 (388)
T ss_dssp CCBCEEEETTT----TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT--TEEEEEE---ETTEEEEE--ESS
T ss_pred cccEEEEcCCC----CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC--CeeEEEE---CCCEEEEE--cCC
Confidence 68999999973 567777766 46668875321000000000111 000111 2678999 44566766 679
Q ss_pred eEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCC
Q 017601 173 SIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSST 252 (369)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 252 (369)
.|++||+......-....+...+..+...+ + .+++++.||+|.+||++++ .... .. ..|.|+||||+
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~--p---~~av~~~dG~L~v~dl~~~---~~~~---~~--~~Vs~v~WSpk 173 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKPVFQLKNVN--N---TLVILNSVNDLSALDLRTK---STKQ---LA--QNVTSFDVTNS 173 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSCEEEEEECS--S---EEEEEETTSEEEEEETTTC---CEEE---EE--ESEEEEEECSS
T ss_pred cEEEEEchhhhccCccceeecceeeEEecC--C---CEEEEECCCCEEEEEccCC---cccc---cc--CCceEEEEcCC
Confidence 999999864332111112222333333221 2 4888999999999999977 4432 22 67999999999
Q ss_pred CcEEEEeCCCcEEEEeCCCcee--eeec------c---ccccCceEEEEEcCCCCCEEEEEE
Q 017601 253 GNIAVAGADRTVTIYDPRRWSA--LSRW------V---HCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 253 g~lasgs~D~~v~vwD~~~~~~--~~~~------~---~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
| ++.|..||++++|+...++. ..++ . +| ...|.+|.|.+ ++.++++-.
T Consensus 174 G-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~-~~~flv~y~ 232 (388)
T 1xip_A 174 Q-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE-EYSPLSVTILS-PQDFLAVFG 232 (388)
T ss_dssp E-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT-TSEEEEEEESS-SSEEEEEEE
T ss_pred c-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCC-CeeEEEEEEec-CCeEEEEEc
Confidence 9 77899999999999887664 4455 2 36 78899999999 888888743
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=2e-09 Score=109.87 Aligned_cols=243 Identities=8% Similarity=0.020 Sum_probs=136.7
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCC----cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEE
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYG----HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
+|...+..++||||+ ..++.+.+..| .|++||+.++.. +.. .... ..+.+++|+|+ . .|+
T Consensus 160 ~~~~~~~~~~~SPDG---~~la~~~~~~G~e~~~i~v~dl~tg~~-~~~---~~~~-------~~~~~~~wspD-~-~l~ 223 (741)
T 1yr2_A 160 DGATALDAWAASDDG---RLLAYSVQDGGSDWRTVKFVGVADGKP-LAD---ELKW-------VKFSGLAWLGN-D-ALL 223 (741)
T ss_dssp ---EEEEEEEECTTS---SEEEEEEEETTCSEEEEEEEETTTCCE-EEE---EEEE-------EESCCCEESTT-S-EEE
T ss_pred CCCEEEEeEEECCCC---CEEEEEEcCCCCceEEEEEEECCCCCC-CCc---cCCC-------ceeccEEEECC-C-EEE
Confidence 345678899999985 23334444444 499999986521 110 1100 00125899996 4 555
Q ss_pred EEecccc--------------eEEEEeCCcce---EEEEee-eCCcceeeeccCCCCCCCCcEEEEEcC-----CeEEEE
Q 017601 166 VARSFSK--------------SIDVYDQDIHL---RTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEG-----CQLTIW 222 (369)
Q Consensus 166 ~~~s~d~--------------~i~lwd~~~~~---~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d-----~~v~iw 222 (369)
.+ +.+. .|.+|+.+... ..+... .++..+.... +++|+..|+..+.+ ..|.+|
T Consensus 224 ~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~---~SpDG~~l~~~~~~~~~~~~~l~~~ 299 (741)
T 1yr2_A 224 YS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS---VSSDGRWVVITSSEGTDPVNTVHVA 299 (741)
T ss_dssp EE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE---ECTTSCEEEEEEECTTCSCCEEEEE
T ss_pred EE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE---ECCCCCEEEEEEEccCCCcceEEEE
Confidence 55 3433 38888875322 111111 1111122222 34677777776654 389999
Q ss_pred eCCcccCCce-eeeeeccCCCcEEEEEECCCC-cEEEEeCC----CcEEEEeCCCc--eeeeeccccccCceEEEEEcCC
Q 017601 223 DLRMKENGGC-LHRICGSVGDILYAVCSSSTG-NIAVAGAD----RTVTIYDPRRW--SALSRWVHCSKYEITGLSFSSI 294 (369)
Q Consensus 223 D~~~~~~~~~-~~~~~~~~~~~v~~v~~sp~g-~lasgs~D----~~v~vwD~~~~--~~~~~~~~h~~~~v~~l~~sp~ 294 (369)
|+.++. .. ...+..+ ...+.... +|+| .|+..+.+ +.|.+||+.++ .....+..+ ...+.++.|+
T Consensus 300 d~~~~~--~~~~~~l~~~-~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~l~~~~~~-- 372 (741)
T 1yr2_A 300 RVTNGK--IGPVTALIPD-LKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-KDNLESVGIA-- 372 (741)
T ss_dssp EEETTE--ECCCEEEECS-SSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-SSEEEEEEEE--
T ss_pred ECCCCC--CcccEEecCC-CCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-CCeEEEEEEE--
Confidence 997651 12 4444433 23344443 4888 77766653 45999999874 233333444 5566677776
Q ss_pred CCCEEEEEECCCeEEEEECc-CCceeEEEEcC-CC-eeeeeEcCCCCEEE-EEe---CCCcEEEEECCCCcc
Q 017601 295 DSNYIYVQGVDYEVFCGQWR-ESSKVFAFRGD-SN-WLGFSKCSNRDVLG-GWS---DSGSIFVADVVAKEN 359 (369)
Q Consensus 295 d~~~l~s~s~D~~i~vwd~~-~~~~~~~~~g~-~~-~~~~~~~~d~~~l~-sgs---~dg~I~iWd~~~~~~ 359 (369)
++.++++...|+..+||.+. .+.....+..+ .. ...+...++++.|+ +.+ ..++|++||+.+++.
T Consensus 373 ~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 373 GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 45678888889988887665 35555555432 21 12233345666444 333 358999999988763
No 194
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.14 E-value=1.4e-09 Score=99.42 Aligned_cols=191 Identities=11% Similarity=-0.015 Sum_probs=119.2
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccC
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKEN 229 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~ 229 (369)
+.+++|++.. ..++.. +.++.++.|.. .....+... ..+..+.+ ++++..+++...++.|.+||..++
T Consensus 8 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~g~l~~~~~~~~~i~~~d~~~~-- 76 (333)
T 2dg1_A 8 LPTLFYSGKS-NSAVPI-ISESELQTITA-EPWLEISKKGLQLEGLNF------DRQGQLFLLDVFEGNIFKINPETK-- 76 (333)
T ss_dssp CCBCCSCGGG-GCSSCC-CCGGGSCEEEC-EEEEEEESSCCCEEEEEE------CTTSCEEEEETTTCEEEEECTTTC--
T ss_pred cceeeecCCc-cceeEE-eecccCccccc-ceeEEEeccCccccCcEE------CCCCCEEEEECCCCEEEEEeCCCC--
Confidence 3468888843 344444 56788888832 222222111 11223333 245554445667899999999876
Q ss_pred CceeeeeeccCCCcEEEEEECCCC-cEEEEeCC----CcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEE
Q 017601 230 GGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD----RTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 230 ~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D----~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
+........ ...+.+++|+|+| ++++...+ +.|.+||..++.....+. .+ ...+..+.++| +++++++.
T Consensus 77 -~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~~d~-~g~l~v~~ 152 (333)
T 2dg1_A 77 -EIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST-AYCIDDMVFDS-KGGFYFTD 152 (333)
T ss_dssp -CEEEEEECS-SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-CCCEEEEEECT-TSCEEEEE
T ss_pred -cEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-CCcccceEECC-CCCEEEEe
Confidence 443333222 3779999999999 66666655 689999988766543332 23 46789999999 99988876
Q ss_pred EC------CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEE-EEEeCCCcEEEEECCC
Q 017601 303 GV------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVL-GGWSDSGSIFVADVVA 356 (369)
Q Consensus 303 s~------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l-~sgs~dg~I~iWd~~~ 356 (369)
.. .+.|..+|..+++......+.....++...++++.| ++.+.++.|++||+.+
T Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 153 FRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 54 245666666554443333222222455557788755 5556789999999864
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.14 E-value=1.1e-08 Score=103.73 Aligned_cols=197 Identities=11% Similarity=-0.024 Sum_probs=122.8
Q ss_pred eeEEEECCCCceeEEEEecccc----eEEEEeCCcce-EEEEeee-CCcceeeeccCCCCCCCCcEEEEEcCCe------
Q 017601 151 WSGLCFSPSQWSMAAVARSFSK----SIDVYDQDIHL-RTLRTLW-YPSSLNFVQNLSPVNGGPNMLAVTEGCQ------ 218 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~----~i~lwd~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~~~lla~s~d~~------ 218 (369)
+.+++|||++. .+|.+.+..+ +|++||+.... ....... ....+.| +||+..|+.++.++.
T Consensus 127 ~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~w------spDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 127 LRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAW------THDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEE------CTTSSEEEEEECCCCSSCCSS
T ss_pred EEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEE------EeCCCEEEEEEECCccccccc
Confidence 56799999554 5665523333 89999985322 2211111 1223333 356778888887655
Q ss_pred ----------EEEEeCCcccCCceeeeeecc-CCCcEEEEEECCCC-cEEEEeC-----CCcEEEEeCCC------ce-e
Q 017601 219 ----------LTIWDLRMKENGGCLHRICGS-VGDILYAVCSSSTG-NIAVAGA-----DRTVTIYDPRR------WS-A 274 (369)
Q Consensus 219 ----------v~iwD~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g-~lasgs~-----D~~v~vwD~~~------~~-~ 274 (369)
|.+|++.++.. .....+... ....+..++||||| +|+..+. +..|.+||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~-~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQS-EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcc-cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999987631 111222221 02457889999999 7766654 57899999976 43 4
Q ss_pred eeeccccccCceEEEEEcCCCCCEEEEEECC----CeEEEEECcCCc--eeEEEEcCCC--ee-eeeEcCCCCEEEEEeC
Q 017601 275 LSRWVHCSKYEITGLSFSSIDSNYIYVQGVD----YEVFCGQWRESS--KVFAFRGDSN--WL-GFSKCSNRDVLGGWSD 345 (369)
Q Consensus 275 ~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D----~~i~vwd~~~~~--~~~~~~g~~~--~~-~~~~~~d~~~l~sgs~ 345 (369)
...+..+ ...+.. .|+| +++.|+..+.+ ..|.+||+.++. ....+..|.. .. .+...+++.++++...
T Consensus 279 ~~~l~~~-~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 279 WVKLIDN-FEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CEEEECS-SSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred eEEeeCC-CCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 5666666 555555 5889 88887776653 369999998764 2344444432 11 2333446778889998
Q ss_pred CCc--EEEEECCCCc
Q 017601 346 SGS--IFVADVVAKE 358 (369)
Q Consensus 346 dg~--I~iWd~~~~~ 358 (369)
|+. |++|++.+++
T Consensus 356 ~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 356 DVKNTLQLHDLATGA 370 (710)
T ss_dssp TTEEEEEEEETTTCC
T ss_pred CCEEEEEEEECCCCC
Confidence 984 5667775664
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.14 E-value=7.2e-09 Score=91.55 Aligned_cols=193 Identities=8% Similarity=-0.007 Sum_probs=122.9
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCcceEEEEee---eCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCccc
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTL---WYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKE 228 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~ 228 (369)
.++++++++ .+++++...++.|.+||.+......... ..+..+.+. +++. +..+..++.|.+||....
T Consensus 27 ~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~------~~g~-l~v~~~~~~i~~~d~~~~- 97 (270)
T 1rwi_B 27 SGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVD------GAGT-VYVTDFNNRVVTLAAGSN- 97 (270)
T ss_dssp EEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEEC------TTCC-EEEEETTTEEEEECTTCS-
T ss_pred cceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEEC------CCCC-EEEEcCCCEEEEEeCCCc-
Confidence 479999955 4555233677899999875432221111 123333332 3454 444444889999998754
Q ss_pred CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCe
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
. ...+.......+..++++|+| .+++...++.|.+||..+.......... ...+.+++++| +++++++...++.
T Consensus 98 --~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~-~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 98 --N-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDN-SGNVYVTDTDNNR 172 (270)
T ss_dssp --C-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCS-CCSCCCEEECT-TCCEEEEEGGGTE
T ss_pred --e-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecccc-CCCceeEEEeC-CCCEEEEECCCCE
Confidence 2 222222212678999999999 6666667889999987654433322233 34678999999 9998887777889
Q ss_pred EEEEECcCCceeEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 308 VFCGQWRESSKVFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 308 i~vwd~~~~~~~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|.+||............+ ....++...++|.++++...++.|++|+.....
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 999998876543322222 222455556688888888889999999986654
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.06 E-value=6.1e-09 Score=97.44 Aligned_cols=168 Identities=18% Similarity=0.146 Sum_probs=110.9
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCcce----------EEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEE
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDIHL----------RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTI 221 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~i 221 (369)
..+++++.. ++++++ +.+ .+.+|+..... ........+. +..+.+ ++..|+++ .++.|++
T Consensus 41 nlLais~~~-gll~a~-~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 41 QNLDISNSK-SLFVAA-SGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp BCEEEETTT-TEEEEE-ETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-----ETTEEEEE-ESSEEEE
T ss_pred cEEEEcCCC-CEEEEe-CCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-----CCCEEEEE-cCCcEEE
Confidence 369999954 566666 555 56679753111 1111122333 444443 24455555 8999999
Q ss_pred EeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEE
Q 017601 222 WDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 222 wD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s 301 (369)
||+++.. .......+ ...+.++.+.+. .++++..||+|.+||+.++.... + ...|++++||| +| ++.
T Consensus 111 ~dv~sl~---~~~~~~~~-~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~----~-~~~Vs~v~WSp-kG--~~v 177 (388)
T 1xip_A 111 LDLEELS---EFRTVTSF-EKPVFQLKNVNN-TLVILNSVNDLSALDLRTKSTKQ----L-AQNVTSFDVTN-SQ--LAV 177 (388)
T ss_dssp EESSSTT---CEEEEEEC-SSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEE----E-EESEEEEEECS-SE--EEE
T ss_pred EEchhhh---ccCcccee-ecceeeEEecCC-CEEEEECCCCEEEEEccCCcccc----c-cCCceEEEEcC-Cc--eEE
Confidence 9998763 22233322 366888777654 38889999999999999876543 4 67899999999 87 788
Q ss_pred EECCCeEEEEECcCCce--eEEE------E---cCC-CeeeeeEcCCCCEEEE
Q 017601 302 QGVDYEVFCGQWRESSK--VFAF------R---GDS-NWLGFSKCSNRDVLGG 342 (369)
Q Consensus 302 ~s~D~~i~vwd~~~~~~--~~~~------~---g~~-~~~~~~~~~d~~~l~s 342 (369)
+..|+++++|+....+. ...+ . +|. ....+..++++.++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999999888775 5556 2 233 1234555667777765
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=4.3e-07 Score=84.87 Aligned_cols=243 Identities=10% Similarity=-0.051 Sum_probs=142.8
Q ss_pred EEEEeecCCCCceEEEEEe----------cCCcEEEEEecCCCCCCcccccccc-CCCCCCCCCCeeEEEECCCCceeEE
Q 017601 97 SIALAETDSSGYMVLGSVD----------SYGHLIVSKLDTSGKDVDRLTYSVL-PQDCGVGEGSWSGLCFSPSQWSMAA 165 (369)
Q Consensus 97 ~l~~s~~~~~~~~~las~d----------~~g~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~~a 165 (369)
.++|+||+ ..++... .++.|.++|..+... + ....+. +.....+.. -.+++|+|++..+++
T Consensus 70 ~i~~spDg----~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~--~~i~~~~~~~~~~g~~-p~~~~~spDG~~l~v 141 (373)
T 2mad_H 70 NPVAAHSG----SEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-I--ADIELPDAPRFDVGPY-SWMNANTPNNADLLF 141 (373)
T ss_pred CeEECCCC----CEEEEEeccccccccCCCCCeEEEEECCCCcE-E--EEEECCCccccccCCC-ccceEECCCCCEEEE
Confidence 78999985 4555443 245688998864311 1 011111 000000000 126899996654444
Q ss_pred EEecccceEEEEeCCcceEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee-----cc
Q 017601 166 VARSFSKSIDVYDQDIHLRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-----GS 239 (369)
Q Consensus 166 ~~~s~d~~i~lwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-----~~ 239 (369)
+....+.+|.++| .... .... ...+.++.+... ....+++.+.|+++.++|. ++ +.+.... ..
T Consensus 142 ~n~~~~~~v~viD-~t~~-~~~~~i~~~~~~~~~~~-----~~~~~~~~~~dg~~~~vd~-~g---~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 142 FQFAAGPAVGLVV-QGGS-SDDQLLSSPTCYHIHPG-----APSTFYLLCAQGGLAKTDH-AG---GAAGAGLVGAMLTA 210 (373)
T ss_pred EecCCCCeEEEEE-CCCC-EEeEEcCCCceEEEEeC-----CCceEEEEcCCCCEEEEEC-CC---cEEEEEeccccccC
Confidence 4412257899999 6432 1222 223333333321 1245667778999999999 76 4442221 11
Q ss_pred CCCcE-EEEEECCCC-cEEEEeCCCcEEEEeCCCce--eeeecccc---------ccCceEEEEEcCCCCCEEEEEEC--
Q 017601 240 VGDIL-YAVCSSSTG-NIAVAGADRTVTIYDPRRWS--ALSRWVHC---------SKYEITGLSFSSIDSNYIYVQGV-- 304 (369)
Q Consensus 240 ~~~~v-~~v~~sp~g-~lasgs~D~~v~vwD~~~~~--~~~~~~~h---------~~~~v~~l~~sp~d~~~l~s~s~-- 304 (369)
..++ ....|.+++ .++..+..+.|.+.|+.... .+..+.-. .......+.|+| +++.++.+..
T Consensus 211 -~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~~~ 288 (373)
T 2mad_H 211 -AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTSEQ 288 (373)
T ss_pred -CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEEeccC
Confidence 1222 234567776 44444477899999987542 22332210 012244578999 8888777643
Q ss_pred --------CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCC-EEEEEe-CCCcEEEEECCCCcch
Q 017601 305 --------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRD-VLGGWS-DSGSIFVADVVAKENE 360 (369)
Q Consensus 305 --------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~-~l~sgs-~dg~I~iWd~~~~~~~ 360 (369)
++.|.+.|..+.+.+..+.......++...+||+ +++++. .++.|.+||+++++..
T Consensus 289 ~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 289 SAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 3589999999999888885433235677788998 788877 5899999999998753
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.06 E-value=5.7e-08 Score=95.76 Aligned_cols=186 Identities=9% Similarity=-0.008 Sum_probs=127.3
Q ss_pred eEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCC--cccCCceeeeeec
Q 017601 163 MAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLR--MKENGGCLHRICG 238 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~--~~~~~~~~~~~~~ 238 (369)
+++++-..+++|.++|... .+..+.....+..+. +++|+.++.+++.|+.|.+||+. +. +.+.++..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~------~SpDGr~lyv~~~dg~V~viD~~~~t~---~~v~~i~~ 238 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISR------LSASGRYLFVIGRDGKVNMIDLWMKEP---TTVAEIKI 238 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEE------ECTTSCEEEEEETTSEEEEEETTSSSC---CEEEEEEC
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceE------ECCCCCEEEEEcCCCeEEEEECCCCCC---cEeEEEec
Confidence 4444438899999999863 344444332333333 34677788888889999999996 55 66777765
Q ss_pred cCCCcEEEEEEC----CCC-cEEEEe-CCCcEEEEeCCCceeeeeccc----------cccCceEEEEEcCCCCCEEEEE
Q 017601 239 SVGDILYAVCSS----STG-NIAVAG-ADRTVTIYDPRRWSALSRWVH----------CSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 239 ~~~~~v~~v~~s----p~g-~lasgs-~D~~v~vwD~~~~~~~~~~~~----------h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
. .....++|+ ||| ++++++ .+++|.|+|..+.+++.++.- |-...+..+.+++..+.++++.
T Consensus 239 G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 239 G--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp C--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred C--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 4 567899999 699 665554 569999999999888876542 2122688899999334456666
Q ss_pred ECCCeEEEEECcCCce--eEEEEcCCCeeeeeEcCCCCEEEEEe-CCCcEEEEECCCCcc
Q 017601 303 GVDYEVFCGQWRESSK--VFAFRGDSNWLGFSKCSNRDVLGGWS-DSGSIFVADVVAKEN 359 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~--~~~~~g~~~~~~~~~~~d~~~l~sgs-~dg~I~iWd~~~~~~ 359 (369)
..++.|.++|....+. +..+........+...+|+++++.++ .++.|.++|+++++.
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 6679999999876432 22222222224455567899876655 679999999998863
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.04 E-value=1.3e-07 Score=89.50 Aligned_cols=230 Identities=11% Similarity=-0.009 Sum_probs=135.5
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
.....|+|++++ .+.++-...+.|++||...+. . ...... ...+. ++|+|++. .++++ ..++
T Consensus 131 ~~P~~la~d~~g----~lyv~d~~~~~I~~id~~~g~----~-~~~~~~-----~~~~~--ia~~~~g~-~l~~~-d~~~ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNN----TVLAYQRDDPRVRLISVDDNK----V-TTVHPG-----FKGGK--PAVTKDKQ-RVYSI-GWEG 192 (409)
T ss_dssp CCEEEEEECSTT----EEEEEETTTTEEEEEETTTTE----E-EEEEET-----CCBCB--CEECTTSS-EEEEE-BSST
T ss_pred CCceEEEEeCCC----CEEEEecCCCcEEEEECCCCE----E-EEeecc-----CCCCc--eeEecCCC-cEEEE-ecCC
Confidence 356789998873 455554456789998876431 0 111111 11122 89999655 44544 3433
Q ss_pred --eEEEEeCCcc--eEEEE-----eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee-----ec
Q 017601 173 --SIDVYDQDIH--LRTLR-----TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI-----CG 238 (369)
Q Consensus 173 --~i~lwd~~~~--~~~~~-----~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~-----~~ 238 (369)
.|.+||.... .+.+. ....+..+.+ +++++.|..+..+++|..||..++ .. ..+ .+
T Consensus 193 ~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav------~p~~g~lyv~d~~~~I~~~d~~~~---~~-~~~~~~~~~g 262 (409)
T 3hrp_A 193 THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVAL------DETEEWLYFVDSNKNFGRFNVKTQ---EV-TLIKQLELSG 262 (409)
T ss_dssp TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEE------CTTSSEEEEECTTCEEEEEETTTC---CE-EEEEECCCCS
T ss_pred CceEEEEEcCCCceeEEeeeccchhcCCcEEEEE------eCCCCeEEEEECCCcEEEEECCCC---CE-EEEecccccC
Confidence 7888876422 22221 1112333333 344556666666789999999876 22 222 11
Q ss_pred cCCCc-EEEEEECCC-C-cEEEEeCCCcEEEEeCCCceeeeeccccc--------------cCceEEEEEcCCCCCEEEE
Q 017601 239 SVGDI-LYAVCSSST-G-NIAVAGADRTVTIYDPRRWSALSRWVHCS--------------KYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 239 ~~~~~-v~~v~~sp~-g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~--------------~~~v~~l~~sp~d~~~l~s 301 (369)
..... ...++|+|+ + ++++-..++.|+.||.... +..+.++. -.....++|+| +++++++
T Consensus 263 ~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyva 339 (409)
T 3hrp_A 263 SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIV 339 (409)
T ss_dssp CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEE
T ss_pred CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEE
Confidence 10111 238999995 5 6666677889999997643 33333330 13478999999 9998888
Q ss_pred EE-CCCeEEEEECcCCceeEEEEcCC----------------CeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 302 QG-VDYEVFCGQWRESSKVFAFRGDS----------------NWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 302 ~s-~D~~i~vwd~~~~~~~~~~~g~~----------------~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
-+ .+++|+.||+.++.. ..+.|+. .-.++...+++.++++-..++.|+.+++
T Consensus 340 d~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 77 889999999877654 4444431 1123333446667777777777776654
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.03 E-value=9.3e-07 Score=78.74 Aligned_cols=236 Identities=8% Similarity=-0.079 Sum_probs=143.2
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
....+.+|++++++ .+.++....+.|.+++.. + . ...+.+.. ......++++.+++ .++++. ..
T Consensus 18 ~~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~-~-~---~~~~~~~~-----~~~~~~~i~~~~~g-~l~v~~-~~ 81 (300)
T 2qc5_A 18 PDSGPYGITSSEDG----KVWFTQHKANKISSLDQS-G-R---IKEFEVPT-----PDAKVMCLIVSSLG-DIWFTE-NG 81 (300)
T ss_dssp TTCCEEEEEECTTS----CEEEEETTTTEEEEECTT-S-C---EEEEECSS-----TTCCEEEEEECTTS-CEEEEE-TT
T ss_pred CCCCcceeeECCCC----CEEEEcCCCCeEEEECCC-C-c---eEEEECCC-----CCCcceeEEECCCC-CEEEEe-cC
Confidence 34677889998873 455554456788888765 2 1 11111111 11234579999844 455544 56
Q ss_pred cceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceee-eeeccCCCcEEEEEE
Q 017601 171 SKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLH-RICGSVGDILYAVCS 249 (369)
Q Consensus 171 d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~-~~~~~~~~~v~~v~~ 249 (369)
++.|..||.......+...........+. +++++..+++...++.|..||.. + +... .+... ...++++++
T Consensus 82 ~~~v~~~d~~g~~~~~~~~~~~~~~~~i~---~~~~g~l~v~~~~~~~i~~~~~~-g---~~~~~~~~~~-~~~~~~i~~ 153 (300)
T 2qc5_A 82 ANKIGKLSKKGGFTEYPLPQPDSGPYGIT---EGLNGDIWFTQLNGDRIGKLTAD-G---TIYEYDLPNK-GSYPAFITL 153 (300)
T ss_dssp TTEEEEECTTSCEEEEECSSTTCCEEEEE---ECSTTCEEEEETTTTEEEEECTT-S---CEEEEECSST-TCCEEEEEE
T ss_pred CCeEEEECCCCCeEEecCCCCCCCCccce---ECCCCCEEEEccCCCeEEEECCC-C---CEEEccCCCC-CCCceeEEE
Confidence 78899998764443332211111222222 22445455554457899999987 4 3322 12212 367899999
Q ss_pred CCCC-cEEEEeCCCcEEEEeCCCceeee-eccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE-EEc-C
Q 017601 250 SSTG-NIAVAGADRTVTIYDPRRWSALS-RWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA-FRG-D 325 (369)
Q Consensus 250 sp~g-~lasgs~D~~v~vwD~~~~~~~~-~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~-~~g-~ 325 (369)
.++| .+++...++.|..||. +++... .+..+ ...+.++++.+ ++++.++....+.|.+||. +++.... +.. .
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITN-TGKLEEYPLPTN-AAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred CCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCC-CCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCC
Confidence 9999 5555556788999998 544433 23334 45689999999 9988877767788999998 4443332 221 1
Q ss_pred CCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 326 SNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 326 ~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
....++...++|.+.++...++.|..||.
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 22234444557887777777899999997
No 202
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.03 E-value=3.9e-08 Score=90.10 Aligned_cols=160 Identities=9% Similarity=0.092 Sum_probs=101.6
Q ss_pred cceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC---C--eEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 171 SKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG---C--QLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 171 d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d---~--~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
+..|.+||... ..+.+ .....+. ++||+..|+.++.+ + .|.+||+.++ +........ . +
T Consensus 42 ~~~l~~~d~~~~~~~~l---~~~~~~~------~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---~~~~l~~~~--~-~ 106 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---ENATMPR------ISPDGKKIAFMRANEEKKVSEIWVADLETL---SSKKILEAK--N-I 106 (347)
T ss_dssp EEEEEEEETTTCCEEEE---ESCEEEE------ECTTSSEEEEEEEETTTTEEEEEEEETTTT---EEEEEEEES--E-E
T ss_pred cceEEEEeCCCCceEEc---ccCCCeE------ECCCCCEEEEEEeccCCCcceEEEEECCCC---ceEEEEcCC--C-c
Confidence 67789998753 22332 2222222 34677778877653 3 4778888776 444444444 4 9
Q ss_pred EEEEECCCC-cEEEEeCC---------------------------CcEEEEeCCCceeeeeccccccCceEEEEEcCCCC
Q 017601 245 YAVCSSSTG-NIAVAGAD---------------------------RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDS 296 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D---------------------------~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~ 296 (369)
.+++|+|+| .|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+| |+
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~sp-dg 182 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHR-DK 182 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEET-TE
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCC-Ce
Confidence 999999999 77776632 5789999998876455443 2 678999999 99
Q ss_pred CEEEEEECCC-------eEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCC--------CcEEEEE
Q 017601 297 NYIYVQGVDY-------EVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDS--------GSIFVAD 353 (369)
Q Consensus 297 ~~l~s~s~D~-------~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~d--------g~I~iWd 353 (369)
++++++.+. ...+|.+.+++......+ .....+ ++||+.|+.++.+ ..|++||
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred -EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 877776652 345554445444333332 211222 6799988877754 3688888
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.03 E-value=1.2e-08 Score=103.27 Aligned_cols=192 Identities=11% Similarity=-0.033 Sum_probs=116.9
Q ss_pred eeEEEECCCCceeEEEEe----cccceEEEEeCCcceEE-EEeeeCC--cceeeeccCCCCCCCCcEEEEEcCCe-----
Q 017601 151 WSGLCFSPSQWSMAAVAR----SFSKSIDVYDQDIHLRT-LRTLWYP--SSLNFVQNLSPVNGGPNMLAVTEGCQ----- 218 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~----s~d~~i~lwd~~~~~~~-~~~~~~~--~~v~~~~~~~~~~~~~~lla~s~d~~----- 218 (369)
+.+++|||++. .+|.+. +.+.+|++||+...... ....... ..+. ++||+..|+.++.|..
T Consensus 123 ~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~------wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 123 LGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPK------WTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp EEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCE------ECTTSSEEEEEECCCCTTSCG
T ss_pred EEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceE------EecCCCEEEEEEecCCCCCcc
Confidence 56899999655 555332 33468999998632211 1011111 2222 3457778888887765
Q ss_pred --------EEEEeCCcccCC-ceeeeeeccCCCcEEEEEECCCC-cEEEEeCCC----cEEEEeCCCceeeeeccccccC
Q 017601 219 --------LTIWDLRMKENG-GCLHRICGSVGDILYAVCSSSTG-NIAVAGADR----TVTIYDPRRWSALSRWVHCSKY 284 (369)
Q Consensus 219 --------v~iwD~~~~~~~-~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~----~v~vwD~~~~~~~~~~~~h~~~ 284 (369)
|++|++.++... ..+.....+ ...+.+++||||| +|+..+.++ .|.+||..+++ ...+..+ ..
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~-~~ 272 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGD-PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKG-VG 272 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCC-TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEEC-SS
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCC-CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecC-CC
Confidence 999999887311 122222222 2578899999999 777776665 67777665443 4455556 55
Q ss_pred ceEEEEEcCCCCCEEEEEE---CCCeEEEEECcCCce---eEEEEcC-CCe-eeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 285 EITGLSFSSIDSNYIYVQG---VDYEVFCGQWRESSK---VFAFRGD-SNW-LGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s---~D~~i~vwd~~~~~~---~~~~~g~-~~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
.+....+ + ++.++++.. .++.|.+||+.++.. ...+..+ ... ..+... ++.++++...|+..++|.+.
T Consensus 273 ~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 273 AKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 6666666 5 556444443 257899999987643 3333333 211 122222 77889999999998888654
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.01 E-value=1.1e-06 Score=78.26 Aligned_cols=232 Identities=6% Similarity=-0.085 Sum_probs=135.1
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
...+.+|++++++ .+.++....+.|+.++.. + . ...+..... .....++++.+++ .++++. ..+
T Consensus 61 ~~~~~~i~~~~~g----~l~v~~~~~~~v~~~d~~-g-~---~~~~~~~~~-----~~~~~~i~~~~~g-~l~v~~-~~~ 124 (300)
T 2qc5_A 61 DAKVMCLIVSSLG----DIWFTENGANKIGKLSKK-G-G---FTEYPLPQP-----DSGPYGITEGLNG-DIWFTQ-LNG 124 (300)
T ss_dssp TCCEEEEEECTTS----CEEEEETTTTEEEEECTT-S-C---EEEEECSST-----TCCEEEEEECSTT-CEEEEE-TTT
T ss_pred CCcceeEEECCCC----CEEEEecCCCeEEEECCC-C-C---eEEecCCCC-----CCCCccceECCCC-CEEEEc-cCC
Confidence 3567889998763 455554446778888765 2 1 111211110 1235589999844 455554 557
Q ss_pred ceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec-cCCCcEEEEEEC
Q 017601 172 KSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG-SVGDILYAVCSS 250 (369)
Q Consensus 172 ~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~-~~~~~v~~v~~s 250 (369)
+.|..||.......+...........+. +++++..+++...++.|..||. ++ +.. .+.. .....+.+++++
T Consensus 125 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~---~d~~g~l~v~~~~~~~i~~~~~-~g---~~~-~~~~~~~~~~~~~i~~d 196 (300)
T 2qc5_A 125 DRIGKLTADGTIYEYDLPNKGSYPAFIT---LGSDNALWFTENQNNSIGRITN-TG---KLE-EYPLPTNAAAPVGITSG 196 (300)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEE---ECTTSSEEEEETTTTEEEEECT-TC---CEE-EEECSSTTCCEEEEEEC
T ss_pred CeEEEECCCCCEEEccCCCCCCCceeEE---ECCCCCEEEEecCCCeEEEECC-CC---cEE-EeeCCCCCCCcceEEEC
Confidence 8899998764433332111111122222 2244554444445789999998 44 322 2322 113568999999
Q ss_pred CCC-cEEEEeCCCcEEEEeCCCceeee-eccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc---C
Q 017601 251 STG-NIAVAGADRTVTIYDPRRWSALS-RWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG---D 325 (369)
Q Consensus 251 p~g-~lasgs~D~~v~vwD~~~~~~~~-~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g---~ 325 (369)
++| .+++....+.|.+||. +++... .+..+ ...+.++++.+ ++++.++...++.|..||.. ++.. .+.. .
T Consensus 197 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~ 271 (300)
T 2qc5_A 197 NDGALWFVEIMGNKIGRITT-TGEISEYDIPTP-NARPHAITAGK-NSEIWFTEWGANQIGRITND-NTIQ-EYQLQTEN 271 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEE-EEECCSTT
T ss_pred CCCCEEEEccCCCEEEEEcC-CCcEEEEECCCC-CCCceEEEECC-CCCEEEeccCCCeEEEECCC-CcEE-EEECCccC
Confidence 999 5555555678999998 444333 23344 56789999999 89877777677999999983 4332 3321 1
Q ss_pred CCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 326 SNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 326 ~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
....++...++|.+.++.. . .|..+|.
T Consensus 272 ~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 272 AEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp CCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 1123444455777666655 4 6666664
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.99 E-value=3.4e-07 Score=82.47 Aligned_cols=223 Identities=9% Similarity=-0.094 Sum_probs=129.3
Q ss_pred eEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEE
Q 017601 96 QSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSID 175 (369)
Q Consensus 96 ~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~ 175 (369)
.+..|++++ ..++.+....+.|+.|+..++. ...+... ....+++++|++. +++ + . +..|.
T Consensus 16 Egp~w~~~~---~~l~~~d~~~~~i~~~d~~~~~----~~~~~~~--------~~~~~i~~~~dG~-l~v-~-~-~~~l~ 76 (297)
T 3g4e_A 16 ESPVWEEVS---NSLLFVDIPAKKVCRWDSFTKQ----VQRVTMD--------APVSSVALRQSGG-YVA-T-I-GTKFC 76 (297)
T ss_dssp EEEEEETTT---TEEEEEETTTTEEEEEETTTCC----EEEEECS--------SCEEEEEEBTTSS-EEE-E-E-TTEEE
T ss_pred cCCeEECCC---CEEEEEECCCCEEEEEECCCCc----EEEEeCC--------CceEEEEECCCCC-EEE-E-E-CCeEE
Confidence 477888863 3455555567889999876541 1111111 1245899999654 444 4 2 56799
Q ss_pred EEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcC---------CeEEEEeCCcccCCceeeeeeccCCCcEE
Q 017601 176 VYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEG---------CQLTIWDLRMKENGGCLHRICGSVGDILY 245 (369)
Q Consensus 176 lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d---------~~v~iwD~~~~~~~~~~~~~~~~~~~~v~ 245 (369)
+||... ..+.+................+++++..+++...+ ..-.||.+.... +.......- ...+
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~~~~~~~~~--~~pn 152 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH--HVKKYFDQV--DISN 152 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--CEEEEEEEE--SBEE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--CEEEEeecc--cccc
Confidence 999753 33333222111111111112234555544433221 234555544321 222222222 5678
Q ss_pred EEEECCCC-cE-EEEeCCCcEEEEeC--CCcee-----eeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC
Q 017601 246 AVCSSSTG-NI-AVAGADRTVTIYDP--RRWSA-----LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES 316 (369)
Q Consensus 246 ~v~~sp~g-~l-asgs~D~~v~vwD~--~~~~~-----~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~ 316 (369)
.++|+|++ .| ++.+.++.|.+||+ .++.. +..+..+ ......+++.+ +|++.++...++.|.+||..++
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~-~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE-EQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG-GCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTC
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC-CCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCc
Confidence 99999999 44 56667889999987 44432 2334444 45688999999 9998888888889999999989
Q ss_pred ceeEEEEcCC-CeeeeeEc-CCCCEEEEE
Q 017601 317 SKVFAFRGDS-NWLGFSKC-SNRDVLGGW 343 (369)
Q Consensus 317 ~~~~~~~g~~-~~~~~~~~-~d~~~l~sg 343 (369)
+.+..+..+. ...++... +|++.|+..
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 8888887653 22233333 455554433
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=3.9e-08 Score=99.52 Aligned_cols=240 Identities=10% Similarity=0.097 Sum_probs=136.9
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCC----cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEE
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYG----HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAV 166 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~ 166 (369)
|...+..++||||+ ..+..+.|..| .|+++|+.++.. +.. .+... ...+++|+ ++..++.+
T Consensus 127 ~~~~l~~~~~SpDg---~~lAy~~~~~G~~~~~i~v~dl~tg~~-~~~---~~~~~-------k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 127 GTTALDQLSFSRDG---RILAYSLSLAGSDWREIHLMDVESKQP-LET---PLKDV-------KFSGISWL-GNEGFFYS 191 (693)
T ss_dssp SCCEEEEEEECTTS---SEEEEEEECSSCCEEEEEEEETTTCSE-EEE---EEEEE-------ESCCCEEE-TTTEEEEE
T ss_pred CcEEEEEEEECCCC---CEEEEEEecCCCceEEEEEEECCCCCC-Ccc---ccCCc-------eeccEEEe-CCCEEEEE
Confidence 66788999999985 34444555544 689999986521 111 11000 01257899 66655444
Q ss_pred Eeccc-------------ceEEEEeCCcce---EEEEeee--CCcceeeeccCCCCCCCCcEEEEEc----CCeEEEEeC
Q 017601 167 ARSFS-------------KSIDVYDQDIHL---RTLRTLW--YPSSLNFVQNLSPVNGGPNMLAVTE----GCQLTIWDL 224 (369)
Q Consensus 167 ~~s~d-------------~~i~lwd~~~~~---~~~~~~~--~~~~v~~~~~~~~~~~~~~lla~s~----d~~v~iwD~ 224 (369)
. .+ ..|.+|+++... ..+.... ++....... +++|+..|+..+. ++.|.+||+
T Consensus 192 ~--~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~---~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 192 S--YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGAT---VTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp E--SSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEE---ECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred E--ecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEE---EcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 3 44 348899876322 1221111 122122222 3466766654432 358999999
Q ss_pred CcccCCceeeeeeccCCCcEEEEEECCCC--cEEEEeCC---CcEEEEeCCCcee--eeeccccccCceEEEEEcCCCCC
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCSSSTG--NIAVAGAD---RTVTIYDPRRWSA--LSRWVHCSKYEITGLSFSSIDSN 297 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g--~lasgs~D---~~v~vwD~~~~~~--~~~~~~h~~~~v~~l~~sp~d~~ 297 (369)
.+++ .....+..+ ....... |+++| +++....+ +.|.++|+.++.. ...+..| ...+. .|++ +++
T Consensus 267 ~~~~--~~~~~l~~~-~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~--~~s~-~g~ 338 (693)
T 3iuj_A 267 SQEN--APLLTVQGD-LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-RQQVL--TVHS-GSG 338 (693)
T ss_dssp TSTT--CCCEEEECS-SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCE--EEEE-ETT
T ss_pred CCCC--CceEEEeCC-CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-CCCEE--EEEE-ECC
Confidence 8763 244455544 2444444 66666 44454443 5799999988654 3456667 55555 8999 888
Q ss_pred EEEEEECCC---eEEEEECcCCceeEEEE-cCC-CeeeeeEcCCCCEEEEEeCC----CcEEEEECCCCcc
Q 017601 298 YIYVQGVDY---EVFCGQWRESSKVFAFR-GDS-NWLGFSKCSNRDVLGGWSDS----GSIFVADVVAKEN 359 (369)
Q Consensus 298 ~l~s~s~D~---~i~vwd~~~~~~~~~~~-g~~-~~~~~~~~~d~~~l~sgs~d----g~I~iWd~~~~~~ 359 (369)
.|+....++ .|++||+..+. ...+. .+. ....+...++++.|+....+ ++|+.||+.+++.
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 887776654 78999987543 33332 122 11122223455554444333 8999999987753
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.94 E-value=4.9e-07 Score=81.69 Aligned_cols=230 Identities=10% Similarity=-0.097 Sum_probs=132.1
Q ss_pred cceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 92 RSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 92 ~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.......+|++++ ..++.+....+.|+.|+.+.. ...+.. + .....++++++++ .++++. ..+
T Consensus 44 ~~~~egp~~~~~g---~~l~~~d~~~~~i~~~~~~g~-----~~~~~~-~------~~~~~gl~~d~dG-~l~v~~-~~~ 106 (305)
T 3dr2_A 44 ATWSEGPAWWEAQ---RTLVWSDLVGRRVLGWREDGT-----VDVLLD-A------TAFTNGNAVDAQQ-RLVHCE-HGR 106 (305)
T ss_dssp CSSEEEEEEEGGG---TEEEEEETTTTEEEEEETTSC-----EEEEEE-S------CSCEEEEEECTTS-CEEEEE-TTT
T ss_pred CcCccCCeEeCCC---CEEEEEECCCCEEEEEeCCCC-----EEEEeC-C------CCccceeeECCCC-CEEEEE-CCC
Confidence 3445688999974 346666667788999976421 111111 1 1224589999954 455544 556
Q ss_pred ceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEE----EEc-------------CCeEEEEeCCcccCCceee
Q 017601 172 KSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLA----VTE-------------GCQLTIWDLRMKENGGCLH 234 (369)
Q Consensus 172 ~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla----~s~-------------d~~v~iwD~~~~~~~~~~~ 234 (369)
+.|.+||.+.....+.........+......+++++..+++ +.. .+.|..||..++ +...
T Consensus 107 ~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~ 183 (305)
T 3dr2_A 107 RAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQR 183 (305)
T ss_dssp TEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEE
T ss_pred CEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEE
Confidence 78999987644443322111111111111122345554543 221 256777887665 3222
Q ss_pred eeeccCCCcEEEEEECCCC-cEEEEeCC------CcEEEEeCCCceee--eecc-ccccCceEEEEEcCCCCCEEEEEEC
Q 017601 235 RICGSVGDILYAVCSSSTG-NIAVAGAD------RTVTIYDPRRWSAL--SRWV-HCSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 235 ~~~~~~~~~v~~v~~sp~g-~lasgs~D------~~v~vwD~~~~~~~--~~~~-~h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
.. .. ...+.++|+|++ .|+.+... +.|.+||+...... ..+. .. ......+++.+ +|++.++. .
T Consensus 184 ~~-~~--~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~-~~~pdgi~~d~-~G~lwv~~-~ 257 (305)
T 3dr2_A 184 MA-DL--DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP-DGLPDGFCVDR-GGWLWSSS-G 257 (305)
T ss_dssp EE-EE--SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS-SSCCCSEEECT-TSCEEECC-S
T ss_pred Ee-cC--CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC-CCCCCeEEECC-CCCEEEec-C
Confidence 22 32 567889999999 67776655 78999998754311 1111 12 33456789999 99965554 4
Q ss_pred CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcE
Q 017601 305 DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSI 349 (369)
Q Consensus 305 D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I 349 (369)
+ .|.+||. .++.+..+..+....++...++++.|+.++.++..
T Consensus 258 ~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 258 T-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp S-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEE
T ss_pred C-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEE
Confidence 4 5999998 46666666544422344444678788877776533
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.93 E-value=3.8e-07 Score=82.10 Aligned_cols=208 Identities=11% Similarity=0.085 Sum_probs=121.1
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
+...+.++++++++ ..+.++ +....|++|+.+ +. .. .+... ...........+++++|++ .++++. ..
T Consensus 69 ~~~~~~~i~~~~~~---g~l~v~-~~~~~l~~~d~~-g~--~~--~~~~~-~~~~~~~~~~~~i~~d~~g-~l~v~~-~~ 136 (314)
T 1pjx_A 69 YGGIPAGCQCDRDA---NQLFVA-DMRLGLLVVQTD-GT--FE--EIAKK-DSEGRRMQGCNDCAFDYEG-NLWITA-PA 136 (314)
T ss_dssp EECCEEEEEECSSS---SEEEEE-ETTTEEEEEETT-SC--EE--ECCSB-CTTSCBCBCCCEEEECTTS-CEEEEE-CB
T ss_pred CCCCCceEEEecCC---CcEEEE-ECCCCEEEEeCC-CC--EE--EEEec-cCCCccccCCcCEEECCCC-CEEEEe-cC
Confidence 45678899998872 133333 333468888876 31 10 11000 0000111124479999954 455544 33
Q ss_pred c---------------ceEEEEeCCcceEEE-EeeeCCcceeeeccCCCCCCCCcEEEE-EcCCeEEEEeCC-cccC--C
Q 017601 171 S---------------KSIDVYDQDIHLRTL-RTLWYPSSLNFVQNLSPVNGGPNMLAV-TEGCQLTIWDLR-MKEN--G 230 (369)
Q Consensus 171 d---------------~~i~lwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~lla~-s~d~~v~iwD~~-~~~~--~ 230 (369)
+ +.|..||.......+ .....+..+.+... .++++..+..+ ..++.|.+||.. ++.. .
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~--~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~ 214 (314)
T 1pjx_A 137 GEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHM--NDGRPYQLIVAETPTKKLWSYDIKGPAKIENK 214 (314)
T ss_dssp CBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEEC--TTSCEEEEEEEETTTTEEEEEEEEETTEEEEE
T ss_pred cccccccccccccCCCCeEEEECCCCCEEEeccCCCCcceEEEecc--cCCCCCEEEEEECCCCeEEEEECCCCCccccc
Confidence 3 567777765333222 22223344444300 01344344444 457899999986 2210 0
Q ss_pred ceeeeeeccCC-CcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEE-EEEECCCe
Q 017601 231 GCLHRICGSVG-DILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYI-YVQGVDYE 307 (369)
Q Consensus 231 ~~~~~~~~~~~-~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l-~s~s~D~~ 307 (369)
.....+..+ . ..+..++++++| ++++...++.|.+||.++++.+..+..+ ...+.+++|+| +++.| ++...++.
T Consensus 215 ~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~i~~~~-dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 215 KVWGHIPGT-HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-FEKPSNLHFKP-QTKTIFVTEHENNA 291 (314)
T ss_dssp EEEEECCCC-SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-SSCEEEEEECT-TSSEEEEEETTTTE
T ss_pred eEEEECCCC-CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-CCCceeEEECC-CCCEEEEEeCCCCe
Confidence 012222222 1 457889999999 6666667889999999878777777666 67899999999 99855 45556789
Q ss_pred EEEEECcC
Q 017601 308 VFCGQWRE 315 (369)
Q Consensus 308 i~vwd~~~ 315 (369)
|..|++..
T Consensus 292 l~~~~~~~ 299 (314)
T 1pjx_A 292 VWKFEWQR 299 (314)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 99999865
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=3.2e-10 Score=106.04 Aligned_cols=180 Identities=11% Similarity=0.050 Sum_probs=93.0
Q ss_pred eeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeecc
Q 017601 162 SMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGS 239 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~ 239 (369)
..++++ +.|+.|..||.. +.+..+.. .... ..+...++..+++++.|+.|..||.+++ +.+..+..+
T Consensus 10 ~~v~~g-s~dg~v~a~d~~tG~~~W~~~~-~~~~------s~p~~~~g~~~v~~s~dg~l~a~d~~tG---~~~w~~~~~ 78 (369)
T 2hz6_A 10 TLLFVS-TLDGSLHAVSKRTGSIKWTLKE-DPVL------QVPTHVEEPAFLPDPNDGSLYTLGSKNN---EGLTKLPFT 78 (369)
T ss_dssp TEEEEE-ETTSEEEEEETTTCCEEEEEEC-CCSC------CCC-----CCEEECTTTCCEEEC--------CCSEECSCC
T ss_pred CEEEEE-cCCCEEEEEECCCCCEEEEecC-CCce------ecceEcCCCEEEEeCCCCEEEEEECCCC---ceeeeeecc
Confidence 466676 789999999964 44444433 1111 1222234456666678999999999888 444333221
Q ss_pred CCCcEE-EEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCce
Q 017601 240 VGDILY-AVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSK 318 (369)
Q Consensus 240 ~~~~v~-~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~ 318 (369)
....+. +.++..++.+++|+.|+.|..||.++|+.+.++..+ . ...++| ++..+++++.|+.|+.||.++++.
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-F----ADSLSP-STSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred CccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC-C----cccccc-cCCEEEEEecCCEEEEEECCCCCE
Confidence 001111 111123347788888999999999999988777766 3 245678 888999999999999999999887
Q ss_pred eEEEEcCCCeeeeeEcCCC---CEEEEEeCCCcEEEEECCCCcc
Q 017601 319 VFAFRGDSNWLGFSKCSNR---DVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 319 ~~~~~g~~~~~~~~~~~d~---~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+-.+..+. +.......+. ..++.++.||.|+.||.++++.
T Consensus 153 ~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 153 RWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred EEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 65554222 0111111121 5677889999999999998864
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.88 E-value=4.6e-07 Score=85.78 Aligned_cols=192 Identities=9% Similarity=-0.028 Sum_probs=121.7
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCC-cceEEEEee-eCCcceeeeccCCCCCCCCcEEEEEcCC--eEEEEeCCcc
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQD-IHLRTLRTL-WYPSSLNFVQNLSPVNGGPNMLAVTEGC--QLTIWDLRMK 227 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~lla~s~d~--~v~iwD~~~~ 227 (369)
.+++|++++ .++++. ..++.|++||.. ..+..+... ..+. +.+ +++++.|+++..++ .|.+||...+
T Consensus 134 ~~la~d~~g-~lyv~d-~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~------~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 134 WGIAAVGNN-TVLAYQ-RDDPRVRLISVDDNKVTTVHPGFKGGK-PAV------TKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp EEEEECSTT-EEEEEE-TTTTEEEEEETTTTEEEEEEETCCBCB-CEE------CTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred eEEEEeCCC-CEEEEe-cCCCcEEEEECCCCEEEEeeccCCCCc-eeE------ecCCCcEEEEecCCCceEEEEEcCCC
Confidence 379999854 466655 678899999986 344433222 1122 322 34566666666654 7888988765
Q ss_pred cCCceeeee---eccCCCcEEEEEECC-CCcEEEEeCCCcEEEEeCCCceeeee----ccccccCce--EEEEEcCCCCC
Q 017601 228 ENGGCLHRI---CGSVGDILYAVCSSS-TGNIAVAGADRTVTIYDPRRWSALSR----WVHCSKYEI--TGLSFSSIDSN 297 (369)
Q Consensus 228 ~~~~~~~~~---~~~~~~~v~~v~~sp-~g~lasgs~D~~v~vwD~~~~~~~~~----~~~h~~~~v--~~l~~sp~d~~ 297 (369)
.....+ .......+.+++++| ++.|+.+..++.|..||..++..... ..++ ...- ..++|+|.++.
T Consensus 205 ---~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~-~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 205 ---WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS-LGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp ---TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC-CCCSSCCEEEEETTTTE
T ss_pred ---ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC-CCCCccccEEEeCCCCE
Confidence 332333 110136678899999 45555577788999999987653222 2223 2222 39999993355
Q ss_pred EEEEEECCCeEEEEECcCCceeEEEEcCC----------------CeeeeeEcCCCCEEEEEe-CCCcEEEEECCCCc
Q 017601 298 YIYVQGVDYEVFCGQWRESSKVFAFRGDS----------------NWLGFSKCSNRDVLGGWS-DSGSIFVADVVAKE 358 (369)
Q Consensus 298 ~l~s~s~D~~i~vwd~~~~~~~~~~~g~~----------------~~~~~~~~~d~~~l~sgs-~dg~I~iWd~~~~~ 358 (369)
++++-...++|+.||.... ...+.|+. .-.++...++|.++++-+ .++.|+.|++.+++
T Consensus 281 lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 6666667889999997653 33333321 113455566889888888 89999999977664
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.87 E-value=2.4e-07 Score=94.49 Aligned_cols=192 Identities=8% Similarity=-0.011 Sum_probs=115.8
Q ss_pred eeEEEECCCCceeEEEEeccc----ceEEEEeCCcc-eEEEEeeeC-CcceeeeccCCCCCCCCcEEEEEcCC-------
Q 017601 151 WSGLCFSPSQWSMAAVARSFS----KSIDVYDQDIH-LRTLRTLWY-PSSLNFVQNLSPVNGGPNMLAVTEGC------- 217 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d----~~i~lwd~~~~-~~~~~~~~~-~~~v~~~~~~~~~~~~~~lla~s~d~------- 217 (369)
+.+++|||++. .+|.+.+.. .+|++||+... ......... ...+. ++|| ..|+.++.+.
T Consensus 165 ~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~------wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 165 LDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLA------WLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCE------ESTT-SEEEEEECCCC------
T ss_pred EEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEE------EECC-CEEEEEEecCccccccc
Confidence 56799999554 555552332 46999998532 211111111 11222 3356 6777777554
Q ss_pred -------eEEEEeCCcccCCceeeeeeccC-CCcEEEEEECCCC-cEEEEeCCC-----cEEEEeCCCc--eeeeecccc
Q 017601 218 -------QLTIWDLRMKENGGCLHRICGSV-GDILYAVCSSSTG-NIAVAGADR-----TVTIYDPRRW--SALSRWVHC 281 (369)
Q Consensus 218 -------~v~iwD~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g-~lasgs~D~-----~v~vwD~~~~--~~~~~~~~h 281 (369)
.|.+|++.++... ....+.... ...+..+.||||| +|+..+.++ .|.+||+.++ ++...+..+
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~-~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSA-DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp --CCCCCEEEEEETTSCGGG-CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred ccCCCCCEEEEEECCCCchh-CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 3899999876311 122222220 1358899999999 777666443 8999999876 325566666
Q ss_pred ccCceEEEEEcCCCCCEEEEEECC----CeEEEEECcCC--ceeEEEEcCCCee-eeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 282 SKYEITGLSFSSIDSNYIYVQGVD----YEVFCGQWRES--SKVFAFRGDSNWL-GFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 282 ~~~~v~~l~~sp~d~~~l~s~s~D----~~i~vwd~~~~--~~~~~~~g~~~~~-~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
...+.... +| +++.|+..+.+ +.|.+||+.++ .....+.++.... .+. ..++.++++...|+..++|.+
T Consensus 316 -~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~-~~~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 316 -LKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG-IAGNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp -SSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE-EEBTEEEEEEEETTEEEEEEE
T ss_pred -CCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE-EECCEEEEEEEECCEEEEEEE
Confidence 45555553 48 88988887764 45999999874 3344444443211 111 126678899999998887755
Q ss_pred C
Q 017601 355 V 355 (369)
Q Consensus 355 ~ 355 (369)
.
T Consensus 392 ~ 392 (741)
T 1yr2_A 392 D 392 (741)
T ss_dssp E
T ss_pred e
Confidence 4
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.87 E-value=4.4e-07 Score=84.59 Aligned_cols=255 Identities=11% Similarity=0.049 Sum_probs=145.2
Q ss_pred EEEeecCCCCceEEEEE--------ecCCcEEEEEecCCCCCCccccccccC-CCCCCCCCCeeEEEECCCCceeEEEEe
Q 017601 98 IALAETDSSGYMVLGSV--------DSYGHLIVSKLDTSGKDVDRLTYSVLP-QDCGVGEGSWSGLCFSPSQWSMAAVAR 168 (369)
Q Consensus 98 l~~s~~~~~~~~~las~--------d~~g~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~~a~~~ 168 (369)
++++||+ ...+++.. ..++.|.+||..+... + ....+.+ .....+...+ +++|+|++..++++..
T Consensus 83 va~spDG--~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v-~--~~I~v~~g~r~~~g~~P~-~~a~spDGk~lyVan~ 156 (386)
T 3sjl_D 83 PVVADDG--SFIAHASTVFSRIARGERTDYVEVFDPVTLLP-T--ADIELPDAPRFLVGTYPW-MTSLTPDGKTLLFYQF 156 (386)
T ss_dssp EEECTTS--SCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-E--EEEEETTCCCCCBSCCGG-GEEECTTSSEEEEEEC
T ss_pred EEECCCC--CEEEEEcccccccccCCCCCEEEEEECCCCeE-E--EEEECCCccccccCCCCc-eEEEcCCCCEEEEEEc
Confidence 8999985 22333321 2356799999876521 1 1111111 0000011112 5999997665555442
Q ss_pred cccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec---cCCCc
Q 017601 169 SFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG---SVGDI 243 (369)
Q Consensus 169 s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~---~~~~~ 243 (369)
..+++|.++|... .+..+.. +.+..... .....+++.+.||++.+.++.+.. +.+..... ....+
T Consensus 157 ~~~~~VsVID~~t~~vv~tI~v---~g~~~~~P-----~g~~~~~~~~~DG~~~~v~~~~~g--~v~~~~~~~~~~~~~~ 226 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFKRMLDV---PDCYHIFP-----TAPDTFFMHCRDGSLAKVAFGTEG--TPEITHTEVFHPEDEF 226 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEEEC---CSEEEEEE-----EETTEEEEEETTSCEEEEECCSSS--CCEEEECCCCSCTTSC
T ss_pred CCCCeEEEEECCCCcEEEEEEC---CCcceeec-----CCCceeEEECCCCCEEEEECCCCC--eEEEeecceecccccc
Confidence 2378999999864 3333322 22211111 123467788899999999997631 22221111 10122
Q ss_pred EE-EEEE-CCCCcEEEEeCCCcEEEEeCCCce--eeeecc---------ccccCceEEEEEcCCCCCEEEEEEC------
Q 017601 244 LY-AVCS-SSTGNIAVAGADRTVTIYDPRRWS--ALSRWV---------HCSKYEITGLSFSSIDSNYIYVQGV------ 304 (369)
Q Consensus 244 v~-~v~~-sp~g~lasgs~D~~v~vwD~~~~~--~~~~~~---------~h~~~~v~~l~~sp~d~~~l~s~s~------ 304 (369)
+. ...| .++|.++-.+.++.|.+.|+.+.. .+..+. +-.......++++| +++.++....
T Consensus 227 ~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 227 LINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWR 305 (386)
T ss_dssp BCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTC
T ss_pred ccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC-CCCeEEEEeccccccc
Confidence 32 1356 467755556778999999997643 333332 11022344577899 8888777643
Q ss_pred ----CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCC-EEEEEe-CCCcEEEEECCCCcchh-hhcccCCC
Q 017601 305 ----DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRD-VLGGWS-DSGSIFVADVVAKENEI-SALKGLVN 369 (369)
Q Consensus 305 ----D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~-~l~sgs-~dg~I~iWd~~~~~~~~-~~l~g~~~ 369 (369)
.++|.+.|+++.+.+..+..-....++...+|++ +|++.. .++.|.++|.++++... -...||+|
T Consensus 306 hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 306 HKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred cCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 2589999999999888874322223566677886 666654 58999999999987421 22345554
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.87 E-value=5.9e-07 Score=80.89 Aligned_cols=192 Identities=12% Similarity=0.130 Sum_probs=115.4
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG 231 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~ 231 (369)
+..|+|.+..++.+. ..++.|..||... ....+.. +..+..+. +++++. ++.+. ++.|.+||..++ +
T Consensus 17 gp~w~~~~~~l~~~d-~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~---~~~dG~-l~v~~-~~~l~~~d~~~g---~ 84 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVD-IPAKKVCRWDSFTKQVQRVTM---DAPVSSVA---LRQSGG-YVATI-GTKFCALNWKEQ---S 84 (297)
T ss_dssp EEEEETTTTEEEEEE-TTTTEEEEEETTTCCEEEEEC---SSCEEEEE---EBTTSS-EEEEE-TTEEEEEETTTT---E
T ss_pred CCeEECCCCEEEEEE-CCCCEEEEEECCCCcEEEEeC---CCceEEEE---ECCCCC-EEEEE-CCeEEEEECCCC---c
Confidence 688999766666666 7889999999763 2333222 22232222 124454 55544 678999999876 3
Q ss_pred eeeeeec---cCCCcEEEEEECCCC-cEEEE-eC--------CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCE
Q 017601 232 CLHRICG---SVGDILYAVCSSSTG-NIAVA-GA--------DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNY 298 (369)
Q Consensus 232 ~~~~~~~---~~~~~v~~v~~sp~g-~lasg-s~--------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~ 298 (369)
....... .....++.++++|+| ++++. .. ...-.||.+.....+..+..+ ....+.++|+| |++.
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-~~~pngi~~sp-dg~~ 162 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-VDISNGLDWSL-DHKI 162 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-ESBEEEEEECT-TSCE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-cccccceEEcC-CCCE
Confidence 2211111 102458899999999 44433 21 123345544332222233334 45578999999 9987
Q ss_pred EE-EEECCCeEEEEECc--CCce-----eEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 299 IY-VQGVDYEVFCGQWR--ESSK-----VFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 299 l~-s~s~D~~i~vwd~~--~~~~-----~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|+ +.+.++.|.+||+. ++.. ...+..+ ....++...++|.+.++...++.|.+||.++++
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 64 55567899999984 4432 1122211 111345555689888888888999999998775
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.85 E-value=4.4e-06 Score=76.26 Aligned_cols=220 Identities=8% Similarity=-0.113 Sum_probs=124.4
Q ss_pred eeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceE
Q 017601 95 VQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSI 174 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i 174 (369)
....+|+|++ ..++.+....+.|+.|+..++. ...+.. ...+.+++|+|++ .+++++ . ..|
T Consensus 51 ~egp~~~~~~---~~l~~~d~~~~~i~~~d~~~~~----~~~~~~--------~~~v~~i~~~~dg-~l~v~~--~-~gl 111 (326)
T 2ghs_A 51 GEGPTFDPAS---GTAWWFNILERELHELHLASGR----KTVHAL--------PFMGSALAKISDS-KQLIAS--D-DGL 111 (326)
T ss_dssp EEEEEEETTT---TEEEEEEGGGTEEEEEETTTTE----EEEEEC--------SSCEEEEEEEETT-EEEEEE--T-TEE
T ss_pred CcCCeEeCCC---CEEEEEECCCCEEEEEECCCCc----EEEEEC--------CCcceEEEEeCCC-eEEEEE--C-CCE
Confidence 3567898864 3455555557789999876431 111111 1135578999854 444443 3 348
Q ss_pred EEEeCC-cceEEEEeeeC---CcceeeeccCCCCCCCCcEEEEEc------CCeEEEEeCCcccCCceeeeeeccCCCcE
Q 017601 175 DVYDQD-IHLRTLRTLWY---PSSLNFVQNLSPVNGGPNMLAVTE------GCQLTIWDLRMKENGGCLHRICGSVGDIL 244 (369)
Q Consensus 175 ~lwd~~-~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~lla~s~------d~~v~iwD~~~~~~~~~~~~~~~~~~~~v 244 (369)
.+||.. .....+..... ...++.+. +++++..+++... .+.|..+| ++ +........ ...
T Consensus 112 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~---~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g---~~~~~~~~~--~~~ 181 (326)
T 2ghs_A 112 FLRDTATGVLTLHAELESDLPGNRSNDGR---MHPSGALWIGTMGRKAETGAGSIYHVA--KG---KVTKLFADI--SIP 181 (326)
T ss_dssp EEEETTTCCEEEEECSSTTCTTEEEEEEE---ECTTSCEEEEEEETTCCTTCEEEEEEE--TT---EEEEEEEEE--SSE
T ss_pred EEEECCCCcEEEEeeCCCCCCCCCCCCEE---ECCCCCEEEEeCCCcCCCCceEEEEEe--CC---cEEEeeCCC--ccc
Confidence 899864 23333322111 01222222 3455554444332 13455555 33 322222222 557
Q ss_pred EEEEECCCC-cE-EEEeCCCcEEEEeCC--Cc-ee-----eeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECc
Q 017601 245 YAVCSSSTG-NI-AVAGADRTVTIYDPR--RW-SA-----LSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWR 314 (369)
Q Consensus 245 ~~v~~sp~g-~l-asgs~D~~v~vwD~~--~~-~~-----~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~ 314 (369)
+.++|+|+| .+ ++.+.++.|.+||+. ++ +. +..+... .....++.+.+ +|++.++...++.|.+||.
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~- 258 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDA-EGHIWNARWGEGAVDRYDT- 258 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECT-TSCEEEEEETTTEEEEECT-
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCC-CCCCCeeEECC-CCCEEEEEeCCCEEEEECC-
Confidence 899999999 55 444567899999986 55 32 2233334 45678899999 9998888777889999998
Q ss_pred CCceeEEEEcCCC-eeeeeEc-CCCCEEE-EEeCC
Q 017601 315 ESSKVFAFRGDSN-WLGFSKC-SNRDVLG-GWSDS 346 (369)
Q Consensus 315 ~~~~~~~~~g~~~-~~~~~~~-~d~~~l~-sgs~d 346 (369)
+++.+..+..+.. ..++... +++..|+ +...+
T Consensus 259 ~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 259 DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 5666677765542 1233333 5656554 44443
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.80 E-value=2.2e-07 Score=86.63 Aligned_cols=143 Identities=12% Similarity=-0.071 Sum_probs=103.3
Q ss_pred CCCCcEEEEEc-----CCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe----------CCCcEEEEe
Q 017601 205 NGGPNMLAVTE-----GCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG----------ADRTVTIYD 268 (369)
Q Consensus 205 ~~~~~lla~s~-----d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs----------~D~~v~vwD 268 (369)
|++..+..... +++|.+.|..+. +.+.++... ..+ . ++++||| ++++++ .+++|.+||
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~---~v~~~I~vG-~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAG---RVIGMIDGG-FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTT---EEEEEEEEC-SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCC---eEEEEEECC-CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 55666665543 679999999998 778877754 244 4 9999999 666654 467899999
Q ss_pred CCCceeeeeccccc------cCceEEEEEcCCCCCEEEEEEC--CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEE
Q 017601 269 PRRWSALSRWVHCS------KYEITGLSFSSIDSNYIYVQGV--DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVL 340 (369)
Q Consensus 269 ~~~~~~~~~~~~h~------~~~v~~l~~sp~d~~~l~s~s~--D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l 340 (369)
..+.+.+.++.-.. ...-..++|+| ||++++.+.. ++.|.++|+.+.+.+..+.-.. .........+.+
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g~~~~ 192 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTF 192 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCCCcee
Confidence 99999888764210 12456799999 9999888764 6899999999999888885433 111111234566
Q ss_pred EEEeCCCcEEEEECCC
Q 017601 341 GGWSDSGSIFVADVVA 356 (369)
Q Consensus 341 ~sgs~dg~I~iWd~~~ 356 (369)
++.+.||.+.+.++.+
T Consensus 193 ~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEETTSCEEEEECCS
T ss_pred EEECCCCCEEEEECCC
Confidence 6777788877777765
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=8.2e-10 Score=103.30 Aligned_cols=142 Identities=11% Similarity=-0.012 Sum_probs=80.5
Q ss_pred CCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccC
Q 017601 206 GGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKY 284 (369)
Q Consensus 206 ~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~ 284 (369)
+++.+++++.|+.|..||.+++ +.+-++.. ..+.+..+.+++ .+++++.|+.|+.||.++++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG---~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG---SIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC---CEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCC---CEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 3568888999999999999998 66655543 334445556677 7888889999999999998887666544111
Q ss_pred ceEEEEEcCC--CCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 285 EITGLSFSSI--DSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 285 ~v~~l~~sp~--d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.+. .+|. ++..+++++.|+.++.||.++++.+-.+..+. ....++++..|+.++.|+.|+.||.++++.
T Consensus 82 ~~~---~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 82 LVQ---ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp HHT---TCSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred ccc---cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 111 1121 34567888899999999999998887776554 123355788899999999999999998864
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.75 E-value=2.4e-06 Score=78.10 Aligned_cols=185 Identities=9% Similarity=-0.022 Sum_probs=110.6
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG 231 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~ 231 (369)
+.+|+|+++.++.+. ..++.|..||... ..+.+.. +..+..+.. ++++ .++.++. ..|.+||..++ +
T Consensus 53 gp~~~~~~~~l~~~d-~~~~~i~~~d~~~~~~~~~~~---~~~v~~i~~---~~dg-~l~v~~~-~gl~~~d~~~g---~ 120 (326)
T 2ghs_A 53 GPTFDPASGTAWWFN-ILERELHELHLASGRKTVHAL---PFMGSALAK---ISDS-KQLIASD-DGLFLRDTATG---V 120 (326)
T ss_dssp EEEEETTTTEEEEEE-GGGTEEEEEETTTTEEEEEEC---SSCEEEEEE---EETT-EEEEEET-TEEEEEETTTC---C
T ss_pred CCeEeCCCCEEEEEE-CCCCEEEEEECCCCcEEEEEC---CCcceEEEE---eCCC-eEEEEEC-CCEEEEECCCC---c
Confidence 688999766666666 7788999999753 2332222 222322221 2344 4555554 45999998876 3
Q ss_pred eeeeeec----cCCCcEEEEEECCCC-cEEEEeC------CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEE
Q 017601 232 CLHRICG----SVGDILYAVCSSSTG-NIAVAGA------DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIY 300 (369)
Q Consensus 232 ~~~~~~~----~~~~~v~~v~~sp~g-~lasgs~------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~ 300 (369)
.. .+.. .....++.++++|+| ++++... .+.|..+| +++.. .+..+ ......++|+| |++.|+
T Consensus 121 ~~-~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-~~~~~~i~~s~-dg~~ly 194 (326)
T 2ghs_A 121 LT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-ISIPNSICFSP-DGTTGY 194 (326)
T ss_dssp EE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-ESSEEEEEECT-TSCEEE
T ss_pred EE-EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-CcccCCeEEcC-CCCEEE
Confidence 32 2221 102468999999999 4443322 24555556 44432 33333 34578999999 998765
Q ss_pred EE-ECCCeEEEEECc--CC-ce-----eEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 301 VQ-GVDYEVFCGQWR--ES-SK-----VFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 301 s~-s~D~~i~vwd~~--~~-~~-----~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
.+ +.++.|.+||+. ++ .. ...+... ....++...++|.++++...++.|.+||..
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 54 457899999986 44 32 1122111 111344445588888877778899999983
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.69 E-value=6e-06 Score=77.03 Aligned_cols=202 Identities=9% Similarity=-0.082 Sum_probs=121.7
Q ss_pred eeEEEEeecCCCCceEEEEEe--cCCcEEEEEecCCCCCCcccccc-ccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 95 VQSIALAETDSSGYMVLGSVD--SYGHLIVSKLDTSGKDVDRLTYS-VLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d--~~g~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
-..++|+||+ ..|+... ....|.++| .++. + ... +. . ++ ++.+.|.+...+++. +.|
T Consensus 127 p~~~~~spDG----~~l~v~n~~~~~~v~viD-~t~~--~---~~~~i~-----~--~~--~~~~~~~~~~~~~~~-~~d 186 (373)
T 2mad_H 127 SWMNANTPNN----ADLLFFQFAAGPAVGLVV-QGGS--S---DDQLLS-----S--PT--CYHIHPGAPSTFYLL-CAQ 186 (373)
T ss_pred ccceEECCCC----CEEEEEecCCCCeEEEEE-CCCC--E---EeEEcC-----C--Cc--eEEEEeCCCceEEEE-cCC
Confidence 3478999985 4554443 256799998 6541 1 111 11 0 00 245556555555555 678
Q ss_pred ceEEEEeCCc-ceEEEEe---eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC-------
Q 017601 172 KSIDVYDQDI-HLRTLRT---LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV------- 240 (369)
Q Consensus 172 ~~i~lwd~~~-~~~~~~~---~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~------- 240 (369)
+.+.++|... ....... ......+ .....+.++++.++..+..+.+.+.|+..... ..+..+....
T Consensus 187 g~~~~vd~~g~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~-~v~~~~~~~~~~~~~~~ 263 (373)
T 2mad_H 187 GGLAKTDHAGGAAGAGLVGAMLTAAQNL--LTQPAQANKSGRIVWPVYSGKILQADISAAGA-TNKAPIDALSGGRKADT 263 (373)
T ss_pred CCEEEEECCCcEEEEEeccccccCCcce--eecceeEecCCEEEEEcCCceEEEEeccCCcc-eEeeeeeecCCcccccc
Confidence 9998898721 1111110 0001110 01111223445666666778999999875411 1222222100
Q ss_pred --CCcEEEEEECCCC-cEEEEeC----------CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCC-EEEEEE-CC
Q 017601 241 --GDILYAVCSSSTG-NIAVAGA----------DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSN-YIYVQG-VD 305 (369)
Q Consensus 241 --~~~v~~v~~sp~g-~lasgs~----------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~-~l~s~s-~D 305 (369)
......++|+|++ ++.++.. ++.|.++|+.+++.+.++.. .....+++|+| |++ +++++. .+
T Consensus 264 ~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~-Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 264 WRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQ-DGGPDLYALSAGT 340 (373)
T ss_pred eecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECC-CCCeEEEEEcCCC
Confidence 1234457899999 6655443 35799999999999988863 34689999999 999 788877 58
Q ss_pred CeEEEEECcCCceeEEE
Q 017601 306 YEVFCGQWRESSKVFAF 322 (369)
Q Consensus 306 ~~i~vwd~~~~~~~~~~ 322 (369)
++|.++|..+++.+..+
T Consensus 341 ~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQST 357 (373)
T ss_pred CeEEEEECCCCCEEeee
Confidence 99999999999888773
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.68 E-value=4.6e-06 Score=78.94 Aligned_cols=195 Identities=11% Similarity=0.019 Sum_probs=115.5
Q ss_pred EEEECCCCceeEEEEec---------ccceEEEEeCC--cceEEEEee--------eCCcceeeeccCCCCCCCCcEEEE
Q 017601 153 GLCFSPSQWSMAAVARS---------FSKSIDVYDQD--IHLRTLRTL--------WYPSSLNFVQNLSPVNGGPNMLAV 213 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s---------~d~~i~lwd~~--~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~lla~ 213 (369)
+++++|++..++++. . .++.|.++|.. +.+..+... ..|..+.+ ++|+.++..+
T Consensus 122 gia~SpDgk~lyVan-~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~------spDGk~lyV~ 194 (426)
T 3c75_H 122 HPVAAEDGSFFAQAS-TVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL------TPDNKNLLFY 194 (426)
T ss_dssp EEEECTTSSCEEEEE-EEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE------CTTSSEEEEE
T ss_pred ceEECCCCCEEEEEe-ccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE------cCCCCEEEEE
Confidence 699999766554443 2 36789999986 344444431 12333333 3567677666
Q ss_pred Ec--CCeEEEEeCCcccCCceeeeeeccCCC-cE------EEEEECCCC-cEEEEeC-----------------------
Q 017601 214 TE--GCQLTIWDLRMKENGGCLHRICGSVGD-IL------YAVCSSSTG-NIAVAGA----------------------- 260 (369)
Q Consensus 214 s~--d~~v~iwD~~~~~~~~~~~~~~~~~~~-~v------~~v~~sp~g-~lasgs~----------------------- 260 (369)
.. +++|.+.|+.+. +.+.++... +. .+ ..++++++| +++....
T Consensus 195 n~~~~~~VsVID~~t~---kvv~~I~v~-g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 195 QFSPAPAVGVVDLEGK---TFDRMLDVP-DCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp ECSSSCEEEEEETTTT---EEEEEEECC-SEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred ecCCCCeEEEEECCCC---eEEEEEEcC-CceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 53 579999999988 666666542 11 00 113444555 2222222
Q ss_pred --------------CCcEEEEeCCCcee--eeecc---cc------ccCceEEEEEcCCCCCEEEEEEC----------C
Q 017601 261 --------------DRTVTIYDPRRWSA--LSRWV---HC------SKYEITGLSFSSIDSNYIYVQGV----------D 305 (369)
Q Consensus 261 --------------D~~v~vwD~~~~~~--~~~~~---~h------~~~~v~~l~~sp~d~~~l~s~s~----------D 305 (369)
.+.|.+.|...... +..+. .. .......++|+| +++.++.... +
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCE
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCEEEEEecccccccccCCC
Confidence 23344444332211 01110 00 001122378999 8887666532 3
Q ss_pred CeEEEEECcCCceeEEEEcCCCeeeeeEcCCCC-EEEEEe-CCCcEEEEECCCCcc
Q 017601 306 YEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRD-VLGGWS-DSGSIFVADVVAKEN 359 (369)
Q Consensus 306 ~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~-~l~sgs-~dg~I~iWd~~~~~~ 359 (369)
++|.+.|..+.+.+..+.....-.++...+|++ ++++.. .++.|.++|+++++.
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 589999999999888885322124666778998 888888 599999999999874
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.65 E-value=2.2e-06 Score=77.40 Aligned_cols=185 Identities=16% Similarity=0.091 Sum_probs=111.6
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEc-CCeEEEEeCCcccCCc
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE-GCQLTIWDLRMKENGG 231 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~-d~~v~iwD~~~~~~~~ 231 (369)
+.+|+|++..++.+. ..++.|..|+.+.....+... ......+. +++++ .++++.. ++.|.+||.. + +
T Consensus 49 gp~~~~~g~~l~~~d-~~~~~i~~~~~~g~~~~~~~~--~~~~~gl~---~d~dG-~l~v~~~~~~~v~~~~~~-g---~ 117 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSD-LVGRRVLGWREDGTVDVLLDA--TAFTNGNA---VDAQQ-RLVHCEHGRRAITRSDAD-G---Q 117 (305)
T ss_dssp EEEEEGGGTEEEEEE-TTTTEEEEEETTSCEEEEEES--CSCEEEEE---ECTTS-CEEEEETTTTEEEEECTT-S---C
T ss_pred CCeEeCCCCEEEEEE-CCCCEEEEEeCCCCEEEEeCC--CCccceee---ECCCC-CEEEEECCCCEEEEECCC-C---C
Confidence 688999665566665 788899999876544444322 12222222 23444 4665554 5789999975 4 2
Q ss_pred eeeeee----ccCCCcEEEEEECCCC-cEEE----EeC-------------CCcEEEEeCCCceeeeeccccccCceEEE
Q 017601 232 CLHRIC----GSVGDILYAVCSSSTG-NIAV----AGA-------------DRTVTIYDPRRWSALSRWVHCSKYEITGL 289 (369)
Q Consensus 232 ~~~~~~----~~~~~~v~~v~~sp~g-~las----gs~-------------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l 289 (369)
. ..+. ......++.++++|+| ++++ |.. .+.|..||..+++..... . ......+
T Consensus 118 ~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~-~~~p~gl 193 (305)
T 3dr2_A 118 A-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D-LDHPNGL 193 (305)
T ss_dssp E-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E-ESSEEEE
T ss_pred E-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c-CCCCcce
Confidence 2 2221 1102346789999999 5554 332 256788888766544333 3 4567899
Q ss_pred EEcCCCCCEEEEEECC------CeEEEEECcCCce--eEEEEc--CCCeeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 290 SFSSIDSNYIYVQGVD------YEVFCGQWRESSK--VFAFRG--DSNWLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 290 ~~sp~d~~~l~s~s~D------~~i~vwd~~~~~~--~~~~~g--~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
+|+| |++.|+.+... +.|++||+..+.. ...+.. .....++...++|.+.++. .+| |.+|+..
T Consensus 194 ~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~~ 266 (305)
T 3dr2_A 194 AFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDSD 266 (305)
T ss_dssp EECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEECTT
T ss_pred EEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEECCC
Confidence 9999 99988777665 7899999876531 112210 1111344445678855544 444 9999874
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.61 E-value=2.9e-06 Score=78.04 Aligned_cols=137 Identities=10% Similarity=0.082 Sum_probs=91.7
Q ss_pred CCeEEEEeCCcccCCceeeeeeccC-----CCcEEEEEECCCC--cEEEEe---CCCcEEEEeCCCceeeeeccccc---
Q 017601 216 GCQLTIWDLRMKENGGCLHRICGSV-----GDILYAVCSSSTG--NIAVAG---ADRTVTIYDPRRWSALSRWVHCS--- 282 (369)
Q Consensus 216 d~~v~iwD~~~~~~~~~~~~~~~~~-----~~~v~~v~~sp~g--~lasgs---~D~~v~vwD~~~~~~~~~~~~h~--- 282 (369)
+.+|.+||+.++ +.+..+.... ...++.++++|++ .+++.. .++.|.+||+.+++....+.+|.
T Consensus 92 ~~~i~~~d~~tg---~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 92 VPKLVAWDTLNN---QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp CCEEEEEETTTT---EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CCeEEEEECCCC---eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 579999999887 5555554320 2356899999865 445555 68899999998877655554320
Q ss_pred -------------------------cCceEEEEEcCCCCCEEEEEECCC-eEEEEECc---CC-----c---eeEEE--E
Q 017601 283 -------------------------KYEITGLSFSSIDSNYIYVQGVDY-EVFCGQWR---ES-----S---KVFAF--R 323 (369)
Q Consensus 283 -------------------------~~~v~~l~~sp~d~~~l~s~s~D~-~i~vwd~~---~~-----~---~~~~~--~ 323 (369)
...+..++|+| |++.|+.+..++ .+..++.. .+ + .+..+ .
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK 247 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence 02368899999 999998888776 55555432 11 0 01111 2
Q ss_pred cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 324 GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 324 g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+.. .++...++|.++++...++.|.+||.++++
T Consensus 248 g~p--dgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 248 PIC--DGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CSC--SCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CCC--ceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 233 456556689999999999999999985554
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.60 E-value=4.6e-06 Score=84.30 Aligned_cols=196 Identities=10% Similarity=0.008 Sum_probs=114.0
Q ss_pred CeeEEEECCCCceeEEEEe----cccceEEEEeCCcce-EEEEeeeC-CcceeeeccCCCCCCCCcEEEEEcCC------
Q 017601 150 SWSGLCFSPSQWSMAAVAR----SFSKSIDVYDQDIHL-RTLRTLWY-PSSLNFVQNLSPVNGGPNMLAVTEGC------ 217 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~----s~d~~i~lwd~~~~~-~~~~~~~~-~~~v~~~~~~~~~~~~~~lla~s~d~------ 217 (369)
.+.+++|||++. .+|.+. +...+|++||+.... ........ ...+.|. |+..|+.++.+.
T Consensus 130 ~l~~~~~SpDg~-~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-------Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSRDGR-ILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-------GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECTTSS-EEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-------TTTEEEEEESSCCC----
T ss_pred EEEEEEECCCCC-EEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-------CCCEEEEEEecCcccccc
Confidence 356789999654 555332 334679999985322 21111111 1223332 466787777663
Q ss_pred -------eEEEEeCCcccCC-ceeeeeec-cCCCcEEEEEECCCC-cE-EEEeC---CCcEEEEeCCCce-eeeeccccc
Q 017601 218 -------QLTIWDLRMKENG-GCLHRICG-SVGDILYAVCSSSTG-NI-AVAGA---DRTVTIYDPRRWS-ALSRWVHCS 282 (369)
Q Consensus 218 -------~v~iwD~~~~~~~-~~~~~~~~-~~~~~v~~v~~sp~g-~l-asgs~---D~~v~vwD~~~~~-~~~~~~~h~ 282 (369)
.|.+|++.++... ..+..... + ...+.++.|+||| +| ++.+. +..|.++|+.++. ....+..+
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~- 279 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ-HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD- 279 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGG-CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCC-CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-
Confidence 4999999876211 12222222 1 2347789999999 54 44332 3589999998753 45566666
Q ss_pred cCceEEEEEcCCCCCEEEE-EECC---CeEEEEECcCCce--eEEEEcCCCeeeeeEcCCCCEEEEEeC-CC--cEEEEE
Q 017601 283 KYEITGLSFSSIDSNYIYV-QGVD---YEVFCGQWRESSK--VFAFRGDSNWLGFSKCSNRDVLGGWSD-SG--SIFVAD 353 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s-~s~D---~~i~vwd~~~~~~--~~~~~g~~~~~~~~~~~d~~~l~sgs~-dg--~I~iWd 353 (369)
....... |++ ++..|+. ...| +.|..+|+.++.. ...+..|.... +...++++.|+.... ++ .|++|+
T Consensus 280 ~~~~~~~-~~~-~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDADVSL-VDN-KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-LTVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSCEEE-EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-EEEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCceEEE-Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-EEEEEECCEEEEEEEECCeeEEEEEE
Confidence 5555555 666 6665554 4443 5799999987644 34454444211 233456776665554 44 789999
Q ss_pred CCCCc
Q 017601 354 VVAKE 358 (369)
Q Consensus 354 ~~~~~ 358 (369)
+..+.
T Consensus 357 ~~g~~ 361 (693)
T 3iuj_A 357 YEGKR 361 (693)
T ss_dssp TTSCE
T ss_pred CCCCe
Confidence 87554
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=2.7e-05 Score=71.51 Aligned_cols=236 Identities=9% Similarity=-0.049 Sum_probs=127.4
Q ss_pred ceeeEEEEeecCCCCceEEEEEe--cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVD--SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d--~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
.....|++++++ .++++.. ..+.+.+|.++.+ . ...+.-........-....+++|+++ +.++++- ..
T Consensus 17 ~~p~~va~~~~g----~~~v~~~~~~~~~~~l~~~~~g-~---~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D-~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDG----RLFLSLHQFYQPEMQVAELTQD-G---LIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLD-NG 86 (343)
T ss_dssp SCEEEEEECTTS----CEEEEECGGGCCSCSEEEEETT-E---EEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEE-CH
T ss_pred CCcceEEECCCC----CEEEEeCCCCCCceEEEEECCC-C---eecCCCcccCcccceeEeeEEEEcCC-CcEEEEc-CC
Confidence 567899999874 4555543 2242334444322 1 11110000000111123568999995 4444443 32
Q ss_pred -----cceEEEEeCC--cceEEEEeee-------CCcceeeeccCCCCCCCCcE-EEEE---cCCeEEEEeCCcccCCce
Q 017601 171 -----SKSIDVYDQD--IHLRTLRTLW-------YPSSLNFVQNLSPVNGGPNM-LAVT---EGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 171 -----d~~i~lwd~~--~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~l-la~s---~d~~v~iwD~~~~~~~~~ 232 (369)
+..|.+||.. +.++.+.... .+..+.+ +++++.+ ++-. .++.|.+||+.++ +.
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~v------d~~~g~~yvtd~~~~~~~~i~v~d~~~g---~~ 157 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAV------DLIHNFVYISDPAPDDKAALIRVDLQTG---LA 157 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEE------ETTTTEEEEEECCSGGGCEEEEEETTTC---CE
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEE------ecCCCEEEEEcCccCCCCeEEEEECCCC---CE
Confidence 4789999975 3344443211 1122222 2333343 4444 5789999999866 33
Q ss_pred eeeeeccC----------------------------CCcEEEEEECCCC-cEEEEeCCC-cEEEEeCC---Cce-----e
Q 017601 233 LHRICGSV----------------------------GDILYAVCSSSTG-NIAVAGADR-TVTIYDPR---RWS-----A 274 (369)
Q Consensus 233 ~~~~~~~~----------------------------~~~v~~v~~sp~g-~lasgs~D~-~v~vwD~~---~~~-----~ 274 (369)
...+.++. ...++.++|+|+| .|+.+..++ .+..+|.. .+. .
T Consensus 158 ~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 158 ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH
T ss_pred EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh
Confidence 33221100 0236889999999 777776665 44444421 111 1
Q ss_pred ee--eccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC-CC-eeeeeEcCCCCEEEEEeCCCcE
Q 017601 275 LS--RWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD-SN-WLGFSKCSNRDVLGGWSDSGSI 349 (369)
Q Consensus 275 ~~--~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~-~~-~~~~~~~~d~~~l~sgs~dg~I 349 (369)
.. ...++ ......+++++ +|.++++...++.|.+||..+++........ .. -.++...+++.++++.+..+.+
T Consensus 238 ~~~~~~~g~-~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 238 GSKIERYSE-KPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp HTTCEEEEE-CCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred hcceEeccc-CCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 11 11234 45567899999 9999999989999999998556543333322 11 1234444577777777755544
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=4.6e-05 Score=71.87 Aligned_cols=191 Identities=6% Similarity=-0.057 Sum_probs=118.8
Q ss_pred EEEC--CCCceeEEEEecccceEEEEeCCc---ceEEEEee-----------eCCcceeeeccCCCCCCCCcEEEEEcC-
Q 017601 154 LCFS--PSQWSMAAVARSFSKSIDVYDQDI---HLRTLRTL-----------WYPSSLNFVQNLSPVNGGPNMLAVTEG- 216 (369)
Q Consensus 154 l~~~--p~~~~~~a~~~s~d~~i~lwd~~~---~~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~lla~s~d- 216 (369)
..++ ++...+++.+ ..+..|.++|+.. ..+..+.. ..|..+.+ .|++ .++++..+
T Consensus 87 ~~~~~~~~r~~l~v~~-l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~------~pdG-i~Vs~~g~~ 158 (462)
T 2ece_A 87 PNGKPNIERRFLIVPG-LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC------GPDA-IYISALGNE 158 (462)
T ss_dssp TTCCTTCCSCEEEEEB-TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE------CSSC-EEEEEEEET
T ss_pred cccCCCccCCEEEEcc-CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE------CCCe-EEEEcCCCc
Confidence 3445 6455555555 8889999999841 11222221 01112222 2455 66766555
Q ss_pred -----CeEEEEeCCcccCCceeeeeeccC--CCcEEEEEECCCC-cEEEEe-------------------CCCcEEEEeC
Q 017601 217 -----CQLTIWDLRMKENGGCLHRICGSV--GDILYAVCSSSTG-NIAVAG-------------------ADRTVTIYDP 269 (369)
Q Consensus 217 -----~~v~iwD~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g-~lasgs-------------------~D~~v~vwD~ 269 (369)
+.|.+.|.++. +.+.++.... ...-|.+-|+|++ .+++.. .+.+|.+||+
T Consensus 159 ~g~~~g~v~vlD~~T~---~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 159 EGEGPGGILMLDHYSF---EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp TSCSCCEEEEECTTTC---CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CCCCCCeEEEEECCCC---eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 78999999988 7777775220 1234568889999 666664 3789999999
Q ss_pred CCceeeeecccc-ccCceEEEEE--cCCCCCEEEEEE------CCCeEEEEECcCCce--eEEE--Ec------------
Q 017601 270 RRWSALSRWVHC-SKYEITGLSF--SSIDSNYIYVQG------VDYEVFCGQWRESSK--VFAF--RG------------ 324 (369)
Q Consensus 270 ~~~~~~~~~~~h-~~~~v~~l~~--sp~d~~~l~s~s------~D~~i~vwd~~~~~~--~~~~--~g------------ 324 (369)
.+++.+.++.-- .......+.| +| +++++..++ .+++|.+|....++. ...+ ..
T Consensus 236 ~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 236 RKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILK 314 (462)
T ss_dssp TTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGG
T ss_pred CCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccc
Confidence 998888776631 0233455656 99 999877766 567898877665321 1111 00
Q ss_pred -----CCCeeeeeEcCCCCEEEEEeC-CCcEEEEECCC
Q 017601 325 -----DSNWLGFSKCSNRDVLGGWSD-SGSIFVADVVA 356 (369)
Q Consensus 325 -----~~~~~~~~~~~d~~~l~sgs~-dg~I~iWd~~~ 356 (369)
......+..++||++|+.+.. .+.|.++|+..
T Consensus 315 ~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp GGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 011123444669998887776 68999999863
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.51 E-value=4.9e-05 Score=70.41 Aligned_cols=177 Identities=14% Similarity=0.019 Sum_probs=109.2
Q ss_pred eEEEEecccceEEEEeCC--cceEEEEeeeCC-----cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeee
Q 017601 163 MAAVARSFSKSIDVYDQD--IHLRTLRTLWYP-----SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHR 235 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~ 235 (369)
.+.++ ..++.+..+|.. +........... ..+..+...+.- .++.+..++.++.+..+|.+++ +.+-.
T Consensus 190 ~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~g~l~~~d~~tG---~~~w~ 264 (376)
T 3q7m_A 190 AAVVG-GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALAYNGNLTALDLRSG---QIMWK 264 (376)
T ss_dssp EEEEC-CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEEECTTSCEEEEETTTC---CEEEE
T ss_pred EEEEE-cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEecCcEEEEEECCCC---cEEee
Confidence 45555 678889999874 333222211100 000001111110 2457777888999999999988 55544
Q ss_pred eeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 236 ICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 236 ~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
... ....++... ++.+..++.++.|..+|.++++.+-.........+..... .+..|+.++.++.+.++|.++
T Consensus 265 ~~~---~~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 265 REL---GSVNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp ECC---CCEEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEEEEETTT
T ss_pred ccC---CCCCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEEEEECCC
Confidence 432 234444443 3478888889999999999998776554210222333333 246788889999999999999
Q ss_pred CceeEEEEcCCCeeeeeEcC--CCCEEEEEeCCCcEEEEE
Q 017601 316 SSKVFAFRGDSNWLGFSKCS--NRDVLGGWSDSGSIFVAD 353 (369)
Q Consensus 316 ~~~~~~~~g~~~~~~~~~~~--d~~~l~sgs~dg~I~iWd 353 (369)
++.+..+.... ..+...+ .+..|+.++.+|.|+.|+
T Consensus 338 G~~~~~~~~~~--~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 338 GRFVAQQKVDS--SGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCEEEEEECCT--TCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CcEEEEEecCC--CcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 99887776532 1222222 456788899999999987
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.49 E-value=3.4e-05 Score=71.47 Aligned_cols=223 Identities=9% Similarity=-0.021 Sum_probs=126.9
Q ss_pred EEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccceEEEEeCC--cceEEEE
Q 017601 110 VLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSKSIDVYDQD--IHLRTLR 187 (369)
Q Consensus 110 ~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~--~~~~~~~ 187 (369)
.+..++.++.|+.+|..++.. .+....... .. ...... + ..+.++ +.++.|..+|.. +......
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~-----~W~~~~~~~-~~----~~p~~~--~-~~v~v~-~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTV-----AWQTKVAGE-AL----SRPVVS--D-GLVLIH-TSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCE-----EEEEECSSC-CC----SCCEEE--T-TEEEEE-CTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCE-----EEEEeCCCc-eE----cCCEEE--C-CEEEEE-cCCCeEEEEECCCCcEEEEEe
Confidence 455556678888888765521 121111110 00 011221 2 355555 678899999964 3333332
Q ss_pred eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCC-C-----cEEEEEECC---CCcEEEE
Q 017601 188 TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVG-D-----ILYAVCSSS---TGNIAVA 258 (369)
Q Consensus 188 ~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~-~-----~v~~v~~sp---~g~lasg 258 (369)
.......... ...+. ..++.++.++.++.+..+|.+++ +.+-....... . .+..+.-.| ++.+..+
T Consensus 171 ~~~~~~~~~~-~~~~~-~~~~~v~~g~~~g~l~~~d~~tG---~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~ 245 (376)
T 3q7m_A 171 LDMPSLSLRG-ESAPT-TAFGAAVVGGDNGRVSAVLMEQG---QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL 245 (376)
T ss_dssp CCC-----CC-CCCCE-EETTEEEECCTTTEEEEEETTTC---CEEEEEECCC-----------CCCCCCEEETTEEEEE
T ss_pred CCCCceeecC-CCCcE-EECCEEEEEcCCCEEEEEECCCC---cEEEEEecccCCCCcccccccccCCCcEEECCEEEEE
Confidence 2111100000 00010 02357777778999999999988 55544432200 0 000011111 3477888
Q ss_pred eCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcC--C
Q 017601 259 GADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCS--N 336 (369)
Q Consensus 259 s~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~--d 336 (369)
+.++.+..+|.++++.+-.... .....+.. ++..++.++.++.+..+|.++++.+-...... ......+ .
T Consensus 246 ~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~---~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~~~~~~~ 317 (376)
T 3q7m_A 246 AYNGNLTALDLRSGQIMWKREL---GSVNDFIV---DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLL--HRLLTSPVLY 317 (376)
T ss_dssp CTTSCEEEEETTTCCEEEEECC---CCEEEEEE---ETTEEEEEETTCCEEEEETTTCCEEEEECTTT--TSCCCCCEEE
T ss_pred ecCcEEEEEECCCCcEEeeccC---CCCCCceE---ECCEEEEEcCCCeEEEEECCCCcEEEeecccC--CCcccCCEEE
Confidence 8899999999999987755442 22344443 45678888899999999999998776664211 0011111 4
Q ss_pred CCEEEEEeCCCcEEEEECCCCcc
Q 017601 337 RDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 337 ~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+..|+.++.+|.|+++|.++++.
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcE
Confidence 67888999999999999998864
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.49 E-value=1.8e-05 Score=79.84 Aligned_cols=138 Identities=9% Similarity=0.029 Sum_probs=92.1
Q ss_pred eEEEEeCCcccCCceeeeeec--cC------CCcEEEEEECCCC----cEEEEeCCCcEEEEeCCCceeeeeccccc---
Q 017601 218 QLTIWDLRMKENGGCLHRICG--SV------GDILYAVCSSSTG----NIAVAGADRTVTIYDPRRWSALSRWVHCS--- 282 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~--~~------~~~v~~v~~sp~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~--- 282 (369)
.|..||.+++ +.+-.++. +. ..++.......+| .++.++.+|.++++|.++++.+....-..
T Consensus 276 ~v~AlD~~TG---~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 352 (689)
T 1yiq_A 276 SIVAVNADTG---EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSW 352 (689)
T ss_dssp EEEEEETTTC---CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eEEEEEccCC---ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccc
Confidence 3999999998 66554442 10 1122222222345 58889999999999999998873221100
Q ss_pred ------------------------c-----------CceEEEEEcCCCCCEEEEEEC-----------------------
Q 017601 283 ------------------------K-----------YEITGLSFSSIDSNYIYVQGV----------------------- 304 (369)
Q Consensus 283 ------------------------~-----------~~v~~l~~sp~d~~~l~s~s~----------------------- 304 (369)
+ .....++|+| +..++++...
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQ 431 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccccccccccc
Confidence 0 0112378888 7777776532
Q ss_pred ----------------------CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 305 ----------------------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 305 ----------------------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+++|+.||+.+++.+-.+..+..+.+-.....+.+++.|+.||.|+.||.++|+.
T Consensus 432 ~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 432 LGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp CSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 4789999999999888876655333222233678999999999999999999975
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.46 E-value=6.6e-06 Score=76.47 Aligned_cols=236 Identities=9% Similarity=-0.109 Sum_probs=132.1
Q ss_pred EEEEeecCCCCceEEEEE--------ecCCcEEEEEecCCCCCCcccccccc-CCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 97 SIALAETDSSGYMVLGSV--------DSYGHLIVSKLDTSGKDVDRLTYSVL-PQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 97 ~l~~s~~~~~~~~~las~--------d~~g~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
.++|+||+ +...++.. ..++.|.++|..+... .....+. +.....+... .+++|+|++.. ++++
T Consensus 69 ~i~~spDg--~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v---v~~I~v~~~~~~~~g~~P-~~ia~SpDGk~-lyVa 141 (368)
T 1mda_H 69 LAVAGHSG--SDFALASTSFARSAKGKRTDYVEVFDPVTFLP---IADIELPDAPRFSVGPRV-HIIGNCASSAC-LLFF 141 (368)
T ss_dssp EEEECTTS--SCEEEEEEEETTTTSSSEEEEEEEECTTTCCE---EEEEEETTSCSCCBSCCT-TSEEECTTSSC-EEEE
T ss_pred ceEECCCC--CEEEEEcccccccccCCCCCEEEEEECCCCCE---EEEEECCCccccccCCCc-ceEEEcCCCCE-EEEE
Confidence 58999985 22333321 1357899999886521 1111111 0000000001 15999996654 4544
Q ss_pred ecc-cceEEE--EeCCcceEEEEeeeCCcceeeeccCCCCCCC-CcEEEEEcCCeEEEEeCCc-----ccCCceee----
Q 017601 168 RSF-SKSIDV--YDQDIHLRTLRTLWYPSSLNFVQNLSPVNGG-PNMLAVTEGCQLTIWDLRM-----KENGGCLH---- 234 (369)
Q Consensus 168 ~s~-d~~i~l--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~lla~s~d~~v~iwD~~~-----~~~~~~~~---- 234 (369)
-.. ...|.+ +|... ++.+.. +.+.... +++ ..+++.+.|+++.+.|+.+ + +.+.
T Consensus 142 n~~~~~~v~V~~iD~~t-v~~i~v---~~~~~~~------p~g~~~~~~~~~dg~~~~vd~~~~~~~~~---~v~~~~t~ 208 (368)
T 1mda_H 142 LFGSSAAAGLSVPGASD-DQLTKS---ASCFHIH------PGAAATHYLGSCPASLAASDLAAAPAAAG---IVGAQCTG 208 (368)
T ss_dssp ECSSSCEEEEEETTTEE-EEEEEC---SSCCCCE------EEETTEEECCCCTTSCEEEECCSSCCCCE---ECCCCSCT
T ss_pred ccCCCCeEEEEEEchhh-ceEEEC---CCceEEc------cCCCeEEEEEcCCCCEEEEECccccccCC---eEEEEeee
Confidence 122 467888 99866 444422 1111111 222 3455566788888888876 3 2211
Q ss_pred eeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCc--eeeeeccc-------c--ccCceEEEEEcCCCCCEEEEE
Q 017601 235 RICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRW--SALSRWVH-------C--SKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 235 ~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~--~~~~~~~~-------h--~~~~v~~l~~sp~d~~~l~s~ 302 (369)
.+... ..+. + ++++ .++..+. +.|.+.|.... +.+..+.- + .......++|+| |++.++.+
T Consensus 209 ~i~vg-~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~ 281 (368)
T 1mda_H 209 AQNCS-SQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NTDGIMIL 281 (368)
T ss_dssp TSCBC-SCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TTTEEEEE
T ss_pred eeeCC-CCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC-CCCEEEEE
Confidence 11111 2444 3 4555 5555555 89999998653 23333321 1 011112268999 98887765
Q ss_pred EC---------CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCC-EEEEEe-CCCcEEEEECCCCcc
Q 017601 303 GV---------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRD-VLGGWS-DSGSIFVADVVAKEN 359 (369)
Q Consensus 303 s~---------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~-~l~sgs-~dg~I~iWd~~~~~~ 359 (369)
.. +..+.++|+.+.+.+..+.....-.++...+||+ ++++.. .++.|.++|+++++.
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 32 2356699999988877774332225667778887 566776 599999999999874
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.45 E-value=2e-05 Score=79.41 Aligned_cols=138 Identities=12% Similarity=0.073 Sum_probs=92.5
Q ss_pred eEEEEeCCcccCCceeeeeec--cC------CCcEEEEEECCCC----cEEEEeCCCcEEEEeCCCceeeeeccccc---
Q 017601 218 QLTIWDLRMKENGGCLHRICG--SV------GDILYAVCSSSTG----NIAVAGADRTVTIYDPRRWSALSRWVHCS--- 282 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~--~~------~~~v~~v~~sp~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~--- 282 (369)
.|..+|.+++ +.+-.++. +. ......+....+| .++.++.+|.|.++|.++++.+..+.-..
T Consensus 284 sv~AlD~~TG---~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 284 SIVALDPDTG---KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp EEEEECTTTC---CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred EEEEEECCCC---CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 5999999998 55544442 10 0112223333455 58889999999999999998876543110
Q ss_pred -------cCce------------------------EEEEEcCCCCCEEEEEECC--------------------------
Q 017601 283 -------KYEI------------------------TGLSFSSIDSNYIYVQGVD-------------------------- 305 (369)
Q Consensus 283 -------~~~v------------------------~~l~~sp~d~~~l~s~s~D-------------------------- 305 (369)
...+ ..++|+| +..++++...+
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeecccccccccccccccccccc
Confidence 0001 2578899 77787775432
Q ss_pred -----------------CeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 306 -----------------YEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 306 -----------------~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+.|..||+.+++.+-.+.....+.+.....++.+++.++.||.+++||.++++.
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 789999999998877765433212222233677888899999999999999974
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.37 E-value=9.2e-05 Score=65.32 Aligned_cols=206 Identities=12% Similarity=0.049 Sum_probs=127.1
Q ss_pred cccccCCccce--eeEEEEeecCCCCceEEEEEe-cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCC
Q 017601 84 SMLNRCPHRSE--VQSIALAETDSSGYMVLGSVD-SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQ 160 (369)
Q Consensus 84 ~~~~~~~H~~~--V~~l~~s~~~~~~~~~las~d-~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 160 (369)
..+...+|... .+.|+|++++ ...++++. ....|.+.|..++.. .....+..+ ... .++++..
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg---~Lyvstg~~~~s~v~~iD~~tg~v---~~~i~l~~~--~fg----eGi~~~g-- 75 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAEND---TLFESTGLYGRSSVRQVALQTGKV---ENIHKMDDS--YFG----EGLTLLN-- 75 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTT---EEEEEECSTTTCEEEEEETTTCCE---EEEEECCTT--CCE----EEEEEET--
T ss_pred eEEEEEECCCCCCcccEEEeCCC---eEEEECCCCCCCEEEEEECCCCCE---EEEEecCCC--cce----EEEEEeC--
Confidence 34445566643 5899999862 33333332 356899999876521 111112111 111 1466653
Q ss_pred ceeEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 161 WSMAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 161 ~~~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
+.++++. -.++.+.++|... .+..+... .+...... +|+..++.+..+++|.++|..+. +.+.++.-
T Consensus 76 ~~lyv~t-~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt------~Dg~~l~vs~gs~~l~viD~~t~---~v~~~I~V 144 (266)
T 2iwa_A 76 EKLYQVV-WLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLA------TDGKILYGSDGTSILYEIDPHTF---KLIKKHNV 144 (266)
T ss_dssp TEEEEEE-TTCSEEEEEETTTTEEEEEEECC-SSSCCEEE------ECSSSEEEECSSSEEEEECTTTC---CEEEEEEC
T ss_pred CEEEEEE-ecCCEEEEEECCCCcEEEEEECC-CCCeEEEE------ECCCEEEEECCCCeEEEEECCCC---cEEEEEEE
Confidence 4455555 6789999999863 33443322 13332222 35667776666789999999987 66666553
Q ss_pred cC----CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc-c-----------cCceEEEEEcCCCCCE-EE
Q 017601 239 SV----GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC-S-----------KYEITGLSFSSIDSNY-IY 300 (369)
Q Consensus 239 ~~----~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h-~-----------~~~v~~l~~sp~d~~~-l~ 300 (369)
.. -..++.+.|. +| .++....++.|.+.|+.+++.+.++.-. . ......++|+| +++. ++
T Consensus 145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~-~~~~lfV 222 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ-ENKRIFV 222 (266)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET-TTTEEEE
T ss_pred CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC-CCCEEEE
Confidence 20 1247788888 78 5555556889999999999988876521 0 13468999999 7654 55
Q ss_pred EEECCCeEEEEECcCC
Q 017601 301 VQGVDYEVFCGQWRES 316 (369)
Q Consensus 301 s~s~D~~i~vwd~~~~ 316 (369)
++.....+...++...
T Consensus 223 Tgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 223 TGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTCSEEEEEEEEEC
T ss_pred ECCCCCeEEEEEEecc
Confidence 6667889988888653
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.36 E-value=1.5e-05 Score=75.51 Aligned_cols=129 Identities=12% Similarity=-0.006 Sum_probs=92.1
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe----------CCCcEEEEeCCCceeeeecc-c-c--
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG----------ADRTVTIYDPRRWSALSRWV-H-C-- 281 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs----------~D~~v~vwD~~~~~~~~~~~-~-h-- 281 (369)
++|.++|..+. +.+.++... ..+ .++++||| +++++. .+++|.++|..+.+.+.++. + .
T Consensus 99 ~~VsVID~~t~---~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDGSTG---RILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEETTTT---EEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred CeEEEEECCCC---EEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 69999999998 788887754 244 89999999 676665 47799999999998887764 1 1
Q ss_pred --ccCceEEEEEcCCCCCEEEEEEC--CCeEEEEECcCCceeEEEEcCCCeeeeeEcC-CCCEEEEEeCCCcEEEEECC
Q 017601 282 --SKYEITGLSFSSIDSNYIYVQGV--DYEVFCGQWRESSKVFAFRGDSNWLGFSKCS-NRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 282 --~~~~v~~l~~sp~d~~~l~s~s~--D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~-d~~~l~sgs~dg~I~iWd~~ 355 (369)
.......+.|+| |+++++.+.. ++.|.+.|+.+.+.+..+.-.. . ....+ ....+++.+.||.+.+.+..
T Consensus 173 ~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~-~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 173 FLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C-YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp CCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred cccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c-eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 012356789999 9999998874 5799999999998888775432 1 01111 12445555666666666653
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.35 E-value=0.00016 Score=63.76 Aligned_cols=191 Identities=7% Similarity=-0.089 Sum_probs=123.2
Q ss_pred EEEECCCCceeEEEEec-ccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCccc
Q 017601 153 GLCFSPSQWSMAAVARS-FSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKE 228 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s-~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~ 228 (369)
|++|+|+ ..++++++. .+++|.++|.. +.++.+....++....+.. +++.+..+. .++.+.++|..+.
T Consensus 25 Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~------~g~~lyv~t~~~~~v~viD~~t~- 96 (266)
T 2iwa_A 25 GLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL------LNEKLYQVVWLKNIGFIYDRRTL- 96 (266)
T ss_dssp EEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE------ETTEEEEEETTCSEEEEEETTTT-
T ss_pred cEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE------eCCEEEEEEecCCEEEEEECCCC-
Confidence 7999985 444444421 26899999985 3344433222221111111 134555544 5889999999988
Q ss_pred CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccc----cCceEEEEEcCCCCCEEEEEE
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCS----KYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~----~~~v~~l~~sp~d~~~l~s~s 303 (369)
+.+.++... ... ...+++|| +++++..+++|.++|..+.+.+.++.--. -...+.+.|. ++...+...
T Consensus 97 --~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~ 169 (266)
T 2iwa_A 97 --SNIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIW 169 (266)
T ss_dssp --EEEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEET
T ss_pred --cEEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecC
Confidence 677777532 011 13355678 66666678999999999988877765210 1236788887 565555555
Q ss_pred CCCeEEEEECcCCceeEEEEcC--------------CCeeeeeEcCCCC-EEEEEeCCCcEEEEECCCCc
Q 017601 304 VDYEVFCGQWRESSKVFAFRGD--------------SNWLGFSKCSNRD-VLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 304 ~D~~i~vwd~~~~~~~~~~~g~--------------~~~~~~~~~~d~~-~l~sgs~dg~I~iWd~~~~~ 358 (369)
.+++|.+-|..+++.+..+.-. ....++...++++ +++++...+.|++-++...+
T Consensus 170 ~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 6889999999999988888521 1124666677654 56677788999999887654
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.32 E-value=0.00029 Score=66.49 Aligned_cols=223 Identities=10% Similarity=0.012 Sum_probs=125.3
Q ss_pred ceEEEEEecCCcEEEEEecCCCCCCccccccccCCCC--CCCC-CCeeEEEECCCCceeEEEEeccc------ceEEEEe
Q 017601 108 YMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDC--GVGE-GSWSGLCFSPSQWSMAAVARSFS------KSIDVYD 178 (369)
Q Consensus 108 ~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~~p~~~~~~a~~~s~d------~~i~lwd 178 (369)
..+++++-.+.+|+++|+.+........ ..+.+.+. ..+. ..+ .+...|++ +++++ ..+ +.|.++|
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~-k~ie~~~~~~~~g~s~Ph-~~~~~pdG--i~Vs~-~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKII-KVIEPEEVKKVSGYSRLH-TVHCGPDA--IYISA-LGNEEGEGPGGILMLD 170 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEE-EEECHHHHHHHHCEEEEE-EEEECSSC--EEEEE-EEETTSCSCCEEEEEC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceee-eeechhhcccccCCCccc-ceeECCCe--EEEEc-CCCcCCCCCCeEEEEE
Confidence 5677788888999999987542211111 11100000 0000 001 47788955 44444 333 6899999
Q ss_pred CC--cceEEEEeeeCCcceee-eccCCCCCCCCcEEEEE-------------------cCCeEEEEeCCcccCCceeeee
Q 017601 179 QD--IHLRTLRTLWYPSSLNF-VQNLSPVNGGPNMLAVT-------------------EGCQLTIWDLRMKENGGCLHRI 236 (369)
Q Consensus 179 ~~--~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~lla~s-------------------~d~~v~iwD~~~~~~~~~~~~~ 236 (369)
.. +.+..+.....+..+.+ +. ++|+++.+++.. .+.+|.+||+.++ +.++++
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~---~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~---k~~~tI 244 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFW---WNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR---KRIHSL 244 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEE---EETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---EEEEEE
T ss_pred CCCCeEEEEEccCCCCccccceEE---ECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC---cEeeEE
Confidence 75 33444432222222221 10 124555555553 2689999999987 677777
Q ss_pred ecc-CCCcEEEEEE--CCCC-cEEEEe------CCCcEEEEeCCCce--eeeec--c-----ccc----------cCceE
Q 017601 237 CGS-VGDILYAVCS--SSTG-NIAVAG------ADRTVTIYDPRRWS--ALSRW--V-----HCS----------KYEIT 287 (369)
Q Consensus 237 ~~~-~~~~v~~v~~--sp~g-~lasgs------~D~~v~vwD~~~~~--~~~~~--~-----~h~----------~~~v~ 287 (369)
... .+.....+.| +|++ ++.+++ .+++|.+|....++ ....+ . +.+ .....
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 642 0123445555 9999 555544 56688766543321 11111 0 000 13478
Q ss_pred EEEEcCCCCCEEEEEEC-CCeEEEEECcC---CceeEEEE-c----------------CCCeeeeeEcCCCCEEEEEe
Q 017601 288 GLSFSSIDSNYIYVQGV-DYEVFCGQWRE---SSKVFAFR-G----------------DSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 288 ~l~~sp~d~~~l~s~s~-D~~i~vwd~~~---~~~~~~~~-g----------------~~~~~~~~~~~d~~~l~sgs 344 (369)
.+.+|| |+++|+.+.. .+.|.++|+.. .+++..+. | .. ..+..++||++|+.+.
T Consensus 325 ~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP--r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP--QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC--CCEEECTTSSEEEEEC
T ss_pred EEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC--CEEEEcCCCCEEEEEc
Confidence 899999 9999888766 67999999863 34444442 2 12 3555677999999888
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.32 E-value=6.2e-05 Score=75.81 Aligned_cols=155 Identities=9% Similarity=-0.015 Sum_probs=94.3
Q ss_pred eeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEc------CCeEEEEeCCcccCCcee
Q 017601 162 SMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE------GCQLTIWDLRMKENGGCL 233 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~------d~~v~iwD~~~~~~~~~~ 233 (369)
..+.++ +.|+.+..+|.. +.+..+...........+...|.- .++.++.++. ++.|..||.+++ +.+
T Consensus 129 ~~v~v~-~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG---~~~ 203 (677)
T 1kb0_A 129 GKVYVG-AWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETG---ERK 203 (677)
T ss_dssp TEEEEE-CTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTC---CEE
T ss_pred CEEEEE-cCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCC---cEE
Confidence 356666 788999999974 444444322000000001101110 1345555443 689999999998 555
Q ss_pred eeeeccCC-------------------------------CcEEEEEECCCC-cEEEEeCCC-------------------
Q 017601 234 HRICGSVG-------------------------------DILYAVCSSSTG-NIAVAGADR------------------- 262 (369)
Q Consensus 234 ~~~~~~~~-------------------------------~~v~~v~~sp~g-~lasgs~D~------------------- 262 (369)
-++..... .....++++|++ +++.+..++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 44432100 011356888888 777777664
Q ss_pred cEEEEeCCCceeeeeccc--ccc-------CceEEEEEcCCCC---CEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 263 TVTIYDPRRWSALSRWVH--CSK-------YEITGLSFSSIDS---NYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 263 ~v~vwD~~~~~~~~~~~~--h~~-------~~v~~l~~sp~d~---~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
+|..+|.++++.+-.++. | . ....-+.... +| ..++.++.++.++++|.++++.+..+.
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~-d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPG-DNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTT-CCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEecCCC-cccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 599999999988765542 2 1 1223334444 67 678899999999999999998876654
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.26 E-value=0.00061 Score=59.75 Aligned_cols=193 Identities=9% Similarity=-0.008 Sum_probs=112.7
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCcc-eEEEEe--eeCCcceeeeccCCCCCCCCcEEEE-EcCCeEEEEeCCcc
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDIH-LRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAV-TEGCQLTIWDLRMK 227 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~-s~d~~v~iwD~~~~ 227 (369)
.+++|++.+..++++. ...+.|..+|.+.. ...+.. ...+..+.+. ++++.+..+ ...+.|.++|+...
T Consensus 39 ~gi~~d~~~~~ly~~d-~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d------~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTD-ISEPSIGRASLHGGEPTTIIRQDLGSPEGIALD------HLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEETTTTEEEEEE-TTTTEEEEEESSSCCCEEEECTTCCCEEEEEEE------TTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEecCCCEEEEEE-CCCCEEEEEecCCCCcEEEEECCCCCccEEEEE------ecCCeEEEEECCCCEEEEEEcCCC
Confidence 4799999666665555 67789999987532 222211 1234444433 233444443 45678999998643
Q ss_pred cCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC---CCcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCCEEEEE
Q 017601 228 ENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA---DRTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 228 ~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~---D~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
. ...+..........++++|++ .|..+.. .+.|..+++.. .....+. .. ......++++| +++.|+.+
T Consensus 112 ---~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~-~~~P~gia~d~-~~~~lyv~ 184 (267)
T 1npe_A 112 ---Q-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDN-LGLPNGLTFDA-FSSQLCWV 184 (267)
T ss_dssp ---S-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTT-CSCEEEEEEET-TTTEEEEE
T ss_pred ---C-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECC-CCCCcEEEEcC-CCCEEEEE
Confidence 1 222221112567899999965 5544443 46888888753 2222222 22 34578999999 77666554
Q ss_pred -ECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 303 -GVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 -s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
...+.|.++|.........+.+-..-.++.. .++.++++-..++.|.++|..+++.
T Consensus 185 d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~-d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 185 DAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS-YGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp ETTTTEEEEEETTEEEEEEEEECCCSEEEEEE-ETTEEEEEETTTTEEEEEETTTTEE
T ss_pred ECCCCEEEEEecCCCceEEEecCCCCceEEEE-eCCEEEEEECCCCeEEEEeCCCCCc
Confidence 4567999999976443333333221133322 1344455555678999999988763
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.20 E-value=0.0003 Score=63.67 Aligned_cols=196 Identities=10% Similarity=-0.050 Sum_probs=105.5
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCC-cceEEEEeeeCCcceeeeccCCCCC-CCCcEEEEEc-------------
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQD-IHLRTLRTLWYPSSLNFVQNLSPVN-GGPNMLAVTE------------- 215 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~lla~s~------------- 215 (369)
..++++.+.+..++++. ..+.|..+|.. ..++.+..........+......++ ++..+++-..
T Consensus 82 p~gi~~~~~~g~l~v~d--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVD--CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEEEETTTTEEEEEE--TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CceEEEcCCCCcEEEEE--CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 35799987344444443 33458888865 2233332111111111111112234 4544444322
Q ss_pred ----CCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEE-eCCCcEEEEeCCCce--eeeeccccccCceE
Q 017601 216 ----GCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVA-GADRTVTIYDPRRWS--ALSRWVHCSKYEIT 287 (369)
Q Consensus 216 ----d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasg-s~D~~v~vwD~~~~~--~~~~~~~h~~~~v~ 287 (369)
++.|..||..++ +.......- ...+.++|+|+| .|..+ ...+.|.+||+.... ....+... .. ..
T Consensus 160 ~~~~~g~v~~~d~~~~---~~~~~~~~~--~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-~g-P~ 232 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTK---ETTLLLKEL--HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-PN-PG 232 (322)
T ss_dssp HTCCCEEEEEEETTTT---EEEEEEEEE--SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-SS-EE
T ss_pred ccCCCceEEEEeCCCC---EEEEeccCC--ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-CC-CC
Confidence 256888887655 222111221 345679999998 55554 566899999987421 11111112 33 68
Q ss_pred EEEEcCCCCCEEEEEEC----------CCeEEEEECcCCceeEEEEcCC----Ce-eeeeEcCCCCEEEEEeCCCcEEEE
Q 017601 288 GLSFSSIDSNYIYVQGV----------DYEVFCGQWRESSKVFAFRGDS----NW-LGFSKCSNRDVLGGWSDSGSIFVA 352 (369)
Q Consensus 288 ~l~~sp~d~~~l~s~s~----------D~~i~vwd~~~~~~~~~~~g~~----~~-~~~~~~~d~~~l~sgs~dg~I~iW 352 (369)
.+++.+ +|++.++... .+.|..+|.. ++.+..+.... .+ ..+. ..++.++++....+.|.++
T Consensus 233 gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~-~~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 233 NIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQ-EHDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEE-EETTEEEEECSSCSEEEEE
T ss_pred CeEECC-CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEE-EeCCEEEEeecCCCceEEE
Confidence 899999 9988777654 4678888864 66666665321 11 1111 1266667777778899999
Q ss_pred ECCCCc
Q 017601 353 DVVAKE 358 (369)
Q Consensus 353 d~~~~~ 358 (369)
++....
T Consensus 310 ~~~~~~ 315 (322)
T 2fp8_A 310 VYDKKG 315 (322)
T ss_dssp EC----
T ss_pred eccccc
Confidence 986544
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.14 E-value=0.00011 Score=71.56 Aligned_cols=135 Identities=13% Similarity=0.006 Sum_probs=90.6
Q ss_pred eEEEEeCCcccCCce-eeeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCce------------eeeeccccc
Q 017601 218 QLTIWDLRMKENGGC-LHRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWS------------ALSRWVHCS 282 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~-~~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~------------~~~~~~~h~ 282 (369)
.|.+.|.++.+. +. +..+... ....++.++||| .++++..+.+|.++|+.+.+ ...++.-
T Consensus 255 ~V~VID~~~~~~-~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-- 329 (595)
T 1fwx_A 255 GVKVVDGRKEAS-SLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-- 329 (595)
T ss_dssp TEEEEECSGGGC-CSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC--
T ss_pred cEEEEeCcccCC-ceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC--
Confidence 588889887311 33 4555443 566789999999 55666679999999999753 2333331
Q ss_pred cCceEEEEEcCCCCCEEEEEECCCeEEEEECcC----------CceeEEEEcCCC-----e-eeeeEcCCCCEEEEEeC-
Q 017601 283 KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE----------SSKVFAFRGDSN-----W-LGFSKCSNRDVLGGWSD- 345 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~----------~~~~~~~~g~~~-----~-~~~~~~~d~~~l~sgs~- 345 (369)
......++|+| +|...++.-.|++|.+||+.. .+.+..+..|-. + .++...+||++|++...
T Consensus 330 G~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 330 GLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 34578999999 995555667899999999977 456666654431 1 11222569999998764
Q ss_pred --CCcE----------EEEECCCCc
Q 017601 346 --SGSI----------FVADVVAKE 358 (369)
Q Consensus 346 --dg~I----------~iWd~~~~~ 358 (369)
|+.+ +++|+..++
T Consensus 409 skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 409 SKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CccccccCCCCCCCcceEEEcCCCc
Confidence 4431 788886554
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.13 E-value=0.00032 Score=70.74 Aligned_cols=152 Identities=6% Similarity=-0.038 Sum_probs=91.2
Q ss_pred eeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEE------cCCeEEEEeCCcccCCcee
Q 017601 162 SMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVT------EGCQLTIWDLRMKENGGCL 233 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s------~d~~v~iwD~~~~~~~~~~ 233 (369)
..++++ +.|+.|..+|.. +.+.......+......+...|.- .++.++.++ .++.|..||.+++ +.+
T Consensus 122 g~v~v~-~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG---~~~ 196 (689)
T 1yiq_A 122 GKVYVG-VLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETG---KEA 196 (689)
T ss_dssp TEEEEE-CTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTC---CEE
T ss_pred CEEEEE-ccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCC---cEE
Confidence 356666 689999999974 444444332011100011111100 133555543 2689999999998 555
Q ss_pred eeeecc-----------------------------CCCc-EEEEEECCCC-cEEEEeCCCc-------------------
Q 017601 234 HRICGS-----------------------------VGDI-LYAVCSSSTG-NIAVAGADRT------------------- 263 (369)
Q Consensus 234 ~~~~~~-----------------------------~~~~-v~~v~~sp~g-~lasgs~D~~------------------- 263 (369)
-++... .+.. -..++++|++ +++.+..+++
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 443310 0001 1257888887 8888887764
Q ss_pred EEEEeCCCceeeeeccc--ccc-------CceEEEEEcCCCCC---EEEEEECCCeEEEEECcCCceeE
Q 017601 264 VTIYDPRRWSALSRWVH--CSK-------YEITGLSFSSIDSN---YIYVQGVDYEVFCGQWRESSKVF 320 (369)
Q Consensus 264 v~vwD~~~~~~~~~~~~--h~~-------~~v~~l~~sp~d~~---~l~s~s~D~~i~vwd~~~~~~~~ 320 (369)
|..||.++++.+-.++. | . .+........ +|+ .++.++.++.++++|.++++.+.
T Consensus 277 v~AlD~~TG~~~W~~~~~~~-d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPG-DAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEEEETTTCCEEEEEESSTT-CCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEccCCceeEeeecCCc-ccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 99999999988766543 2 1 1222223333 554 78889999999999999998764
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.11 E-value=0.00066 Score=59.43 Aligned_cols=188 Identities=12% Similarity=0.079 Sum_probs=114.4
Q ss_pred ccccCCccc--eeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCce
Q 017601 85 MLNRCPHRS--EVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWS 162 (369)
Q Consensus 85 ~~~~~~H~~--~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 162 (369)
++...+|.. -.+.|.|+.+ .+..+...+|.|.++|+.++.. + . .. +.+.. .+ .++++.. +.
T Consensus 45 Vv~~~phd~~~ftqGL~~~~~-----~Ly~stG~~g~v~~iD~~Tgkv-~-~-~~-l~~~~--Fg----eGit~~g--~~ 107 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQG-----HFFESTGHQGTLRQLSLESAQP-V-W-ME-RLGNI--FA----EGLASDG--ER 107 (268)
T ss_dssp EEEEEECCTTCCEEEEEEETT-----EEEEEETTTTEEEECCSSCSSC-S-E-EE-ECTTC--CE----EEEEECS--SC
T ss_pred EEEEEcCCCccccceEEEECC-----EEEEEcCCCCEEEEEECCCCcE-E-e-EE-CCCCc--ce----eEEEEeC--CE
Confidence 333445653 3488999742 5667777788899988876521 1 1 12 22211 11 2466654 44
Q ss_pred eEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccC
Q 017601 163 MAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSV 240 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~ 240 (369)
++... -.++.+.+||... .+.++... +...... +|+..|+.+..+++|.++|..+. +.+.++.-..
T Consensus 108 Ly~lt-w~~~~v~V~D~~Tl~~~~ti~~~--~eGwGLt------~Dg~~L~vSdGs~~l~~iDp~T~---~v~~~I~V~~ 175 (268)
T 3nok_A 108 LYQLT-WTEGLLFTWSGMPPQRERTTRYS--GEGWGLC------YWNGKLVRSDGGTMLTFHEPDGF---ALVGAVQVKL 175 (268)
T ss_dssp EEEEE-SSSCEEEEEETTTTEEEEEEECS--SCCCCEE------EETTEEEEECSSSEEEEECTTTC---CEEEEEECEE
T ss_pred EEEEE-ccCCEEEEEECCcCcEEEEEeCC--CceeEEe------cCCCEEEEECCCCEEEEEcCCCC---eEEEEEEeCC
Confidence 55555 6789999999863 44444332 2212222 24556666656889999999988 6666655320
Q ss_pred ----CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc------------ccCceEEEEEcCCCCCEEEEE
Q 017601 241 ----GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC------------SKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 241 ----~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h------------~~~~v~~l~~sp~d~~~l~s~ 302 (369)
-..++.+.|. +| .++..-.+..|.+.|.++++.+..+.-. ..+-.+.|+++|...+++++|
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 1246778877 77 4455446889999999999988765421 013568999999444455554
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.09 E-value=0.00081 Score=60.40 Aligned_cols=184 Identities=11% Similarity=-0.017 Sum_probs=107.4
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCc
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGG 231 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~ 231 (369)
++.+.++ + .+.++ +.++.|..||... ....+.. ....+... ..++ ++.+..++ +.|..|| .++ +
T Consensus 141 ~~~~~~~-g-~l~vg-t~~~~l~~~d~~g~~~~~~~~--~~~~~~~~---~~d~-~g~l~v~t--~~l~~~d-~~g---~ 205 (330)
T 3hxj_A 141 TPIVSED-G-TIYVG-SNDNYLYAINPDGTEKWRFKT--NDAITSAA---SIGK-DGTIYFGS--DKVYAIN-PDG---T 205 (330)
T ss_dssp CCEECTT-S-CEEEE-CTTSEEEEECTTSCEEEEEEC--SSCCCSCC---EECT-TCCEEEES--SSEEEEC-TTS---C
T ss_pred eeEEcCC-C-EEEEE-cCCCEEEEECCCCCEeEEEec--CCCceeee---EEcC-CCEEEEEe--CEEEEEC-CCC---c
Confidence 4555552 3 35555 6778999998762 2222221 11111111 1112 34555555 8899999 665 4
Q ss_pred eeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEE
Q 017601 232 CLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCG 311 (369)
Q Consensus 232 ~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vw 311 (369)
.+..+... ...+.++++.++|.|..++.++.|..+|. +++.+..+... ...+.++.+.+ ++ .|..++.++.+..+
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~-~~~~~~~~~~~-~g-~l~v~t~~ggl~~~ 280 (330)
T 3hxj_A 206 EKWNFYAG-YWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTG-KRIESSPVIGN-TD-TIYFGSYDGHLYAI 280 (330)
T ss_dssp EEEEECCS-SCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECS-SCCCSCCEECT-TS-CEEEECTTCEEEEE
T ss_pred EEEEEccC-CcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCC-CCccccceEcC-CC-eEEEecCCCCEEEE
Confidence 44444433 35688888999887777888888988884 55555555444 34445556655 55 45667788899999
Q ss_pred ECcCCceeEEEEcCCC-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 312 QWRESSKVFAFRGDSN-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 312 d~~~~~~~~~~~g~~~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
|. +++....+..... ...+....++. |..|+.+|.+++...+..+
T Consensus 281 d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 281 NP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred CC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 96 6666666643321 11222223454 5668999999998776543
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.08 E-value=0.00095 Score=58.37 Aligned_cols=190 Identities=10% Similarity=0.079 Sum_probs=113.7
Q ss_pred cccccCCccce--eeEEEEeecCCCCceEEEEEecCC--cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC
Q 017601 84 SMLNRCPHRSE--VQSIALAETDSSGYMVLGSVDSYG--HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 84 ~~~~~~~H~~~--V~~l~~s~~~~~~~~~las~d~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
.+++..+|... .+.|.|+ ++ .+..|...+| .|+++|+.++.. + ....+.+. ..+ .++++.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~----~LyestG~~g~S~v~~vD~~Tgkv-~--~~~~l~~~--~Fg----eGit~~-- 95 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NG----YFYESTGLNGRSSIRKVDIESGKT-L--QQIELGKR--YFG----EGISDW-- 95 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TT----EEEEEEEETTEEEEEEECTTTCCE-E--EEEECCTT--CCE----EEEEEE--
T ss_pred EEEEEecCCCCcccceEEEE-CC----EEEEECCCCCCceEEEEECCCCcE-E--EEEecCCc--cce----eEEEEe--
Confidence 44444566544 4899998 42 4555555555 888888876521 1 11112111 111 145554
Q ss_pred CceeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 160 QWSMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
++.++... -.++.+.+||.. +.+.++.... ...... +|+..|+.+..+++|.++|..+. +.+.++.
T Consensus 96 g~~ly~lt-w~~~~v~v~D~~t~~~~~ti~~~~--eG~glt------~dg~~L~~SdGs~~i~~iDp~T~---~v~~~I~ 163 (262)
T 3nol_A 96 KDKIVGLT-WKNGLGFVWNIRNLRQVRSFNYDG--EGWGLT------HNDQYLIMSDGTPVLRFLDPESL---TPVRTIT 163 (262)
T ss_dssp TTEEEEEE-SSSSEEEEEETTTCCEEEEEECSS--CCCCEE------ECSSCEEECCSSSEEEEECTTTC---SEEEEEE
T ss_pred CCEEEEEE-eeCCEEEEEECccCcEEEEEECCC--CceEEe------cCCCEEEEECCCCeEEEEcCCCC---eEEEEEE
Confidence 34555555 678999999986 3444443321 212222 24556666555788999999988 6666655
Q ss_pred ccC----CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc-c----------cCceEEEEEcCCCCCEEEE
Q 017601 238 GSV----GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC-S----------KYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 238 ~~~----~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h-~----------~~~v~~l~~sp~d~~~l~s 301 (369)
... -..++.+.|. +| ..+..-.++.|.+.|.++++.+..+.-. + .+-.+.|+|+| +++.|..
T Consensus 164 V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp-~~~~lfV 241 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK-EHHRLFV 241 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET-TTTEEEE
T ss_pred eccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC-CCCEEEE
Confidence 310 1345667776 67 4455546889999999999988765421 0 12458999999 7776666
Q ss_pred EE
Q 017601 302 QG 303 (369)
Q Consensus 302 ~s 303 (369)
.+
T Consensus 242 TG 243 (262)
T 3nol_A 242 TG 243 (262)
T ss_dssp EE
T ss_pred EC
Confidence 65
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.04 E-value=0.00035 Score=62.84 Aligned_cols=176 Identities=13% Similarity=0.086 Sum_probs=109.1
Q ss_pred eEEEEecccceEEEEeCC-cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCC
Q 017601 163 MAAVARSFSKSIDVYDQD-IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVG 241 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~ 241 (369)
.+.++ +.++.+..+|.. ........ ....+... ...+ ++.+..++.++.|..||.. + +.+..+... .
T Consensus 109 ~l~v~-t~~~~l~~~d~~g~~~~~~~~--~~~~~~~~---~~~~-~g~l~vgt~~~~l~~~d~~-g---~~~~~~~~~-~ 176 (330)
T 3hxj_A 109 ILYVT-SMDGHLYAINTDGTEKWRFKT--KKAIYATP---IVSE-DGTIYVGSNDNYLYAINPD-G---TEKWRFKTN-D 176 (330)
T ss_dssp EEEEE-CTTSEEEEECTTSCEEEEEEC--SSCCCSCC---EECT-TSCEEEECTTSEEEEECTT-S---CEEEEEECS-S
T ss_pred EEEEE-ecCCEEEEEcCCCCEEEEEcC--CCceeeee---EEcC-CCEEEEEcCCCEEEEECCC-C---CEeEEEecC-C
Confidence 45555 678889999876 22222211 11111111 1112 4567778888999999988 6 555555443 3
Q ss_pred CcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 242 DILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 242 ~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
..+.++.+.+++.+..++ +.|..|| .+++.+..+... ...+.++...+ ++.+ ..++.++.+..+|. +++.+..
T Consensus 177 ~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~-~~~~~~~~~~~-~g~l-~v~t~~~gl~~~~~-~g~~~~~ 249 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAG-YWTVTRPAISE-DGTI-YVTSLDGHLYAINP-DGTEKWR 249 (330)
T ss_dssp CCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCS-SCCCSCCEECT-TSCE-EEEETTTEEEEECT-TSCEEEE
T ss_pred CceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccC-CcceeceEECC-CCeE-EEEcCCCeEEEECC-CCCEeEE
Confidence 567777888888555555 7899999 777776666655 56788888888 7654 55667888888874 4555555
Q ss_pred EEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 322 FRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 322 ~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+..............+..|..++.+|.|+.+|. +++
T Consensus 250 ~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 250 FKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp EECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSC
T ss_pred eeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCc
Confidence 543331111111122456777888888999985 443
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.03 E-value=0.0033 Score=54.92 Aligned_cols=202 Identities=12% Similarity=-0.004 Sum_probs=115.6
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
.....++|++++ ..+..+-...+.|+.++.+.... ...+... -..-.+++++|.+..++++. ...+
T Consensus 36 ~~~~gi~~d~~~---~~ly~~d~~~~~I~~~~~~g~~~-----~~~~~~~-----~~~p~~ia~d~~~~~lyv~d-~~~~ 101 (267)
T 1npe_A 36 KVIIGLAFDCVD---KVVYWTDISEPSIGRASLHGGEP-----TTIIRQD-----LGSPEGIALDHLGRTIFWTD-SQLD 101 (267)
T ss_dssp EEEEEEEEETTT---TEEEEEETTTTEEEEEESSSCCC-----EEEECTT-----CCCEEEEEEETTTTEEEEEE-TTTT
T ss_pred CcEEEEEEecCC---CEEEEEECCCCEEEEEecCCCCc-----EEEEECC-----CCCccEEEEEecCCeEEEEE-CCCC
Confidence 356789998863 23444434467888888764311 0111100 01234799999666555555 6778
Q ss_pred eEEEEeCCcc-eEEEEe--eeCCcceeeeccCCCCCCCCcEEEEEc---CCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 173 SIDVYDQDIH-LRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVTE---GCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 173 ~i~lwd~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s~---d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
.|.+++.+.. .+.+.. ...|..+.+. ++++.|..+.. .+.|..+++... ....+........+.
T Consensus 102 ~I~~~~~~g~~~~~~~~~~~~~P~~i~vd------~~~g~lyv~~~~~~~~~I~~~~~dg~----~~~~~~~~~~~~P~g 171 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTGLVNPRGIVTD------PVRGNLYWTDWNRDNPKIETSHMDGT----NRRILAQDNLGLPNG 171 (267)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEE------TTTTEEEEEECCSSSCEEEEEETTSC----CCEEEECTTCSCEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCccEEEEe------eCCCEEEEEECCCCCcEEEEEecCCC----CcEEEEECCCCCCcE
Confidence 8999987532 222211 1233344333 33455544433 368888887533 222222111256789
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCCceeEEEE
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~~~~~~~~ 323 (369)
++++|++ .| ++-...+.|.++|+........+.+ ......+++ ++..|+.+. ..+.|..+|..+++.+..+.
T Consensus 172 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~P~gi~~---d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTS---YGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--CCSEEEEEE---ETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--CCCceEEEE---eCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 9999986 44 5555678999999876443333332 223356654 345555544 56799999999888887774
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.03 E-value=7.8e-05 Score=72.68 Aligned_cols=182 Identities=10% Similarity=-0.073 Sum_probs=114.6
Q ss_pred eEEEEecccceEEEEeCCc--ceEEEEe--eeCCcceeeeccCCCCCCCCcEEEEE------------------cCCeEE
Q 017601 163 MAAVARSFSKSIDVYDQDI--HLRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVT------------------EGCQLT 220 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~~--~~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s------------------~d~~v~ 220 (369)
++.++...+..|.+.|... ..+.+.. ...+..+.+..+ |++.++++++ .++.+.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~----p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKW----PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCS----SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeec----CCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3444447788899999864 3332221 123334443321 4566666653 256899
Q ss_pred EEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCC-------------------------------------
Q 017601 221 IWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADR------------------------------------- 262 (369)
Q Consensus 221 iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~------------------------------------- 262 (369)
+.|..+. +.+.++.-. +...-++++|+| ++++.+.+.
T Consensus 179 vID~~t~---~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 179 AVDADKW---EVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEETTTT---EEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEECCCC---eEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 9999987 677666643 344567899999 777666442
Q ss_pred -cEEEEeCCC--cee-eeeccccccCceEEEEEcCCCCCEEEEEE-CCCeEEEEECcCCc------------eeEEEEcC
Q 017601 263 -TVTIYDPRR--WSA-LSRWVHCSKYEITGLSFSSIDSNYIYVQG-VDYEVFCGQWRESS------------KVFAFRGD 325 (369)
Q Consensus 263 -~v~vwD~~~--~~~-~~~~~~h~~~~v~~l~~sp~d~~~l~s~s-~D~~i~vwd~~~~~------------~~~~~~g~ 325 (369)
.|.|.|.++ ++. +..+.. .....++.++| ||++++.++ .+.+|.++|+.+.+ ......--
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI--ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE--ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred CcEEEEeCcccCCceeEEEEec--CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 477888877 444 344432 23567899999 999877765 57899999998642 22222211
Q ss_pred CCeeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 326 SNWLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 326 ~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
.+-..+...++|....+.--|++|.+||+.+
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1113445567884455666799999999876
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.03 E-value=5e-05 Score=66.57 Aligned_cols=142 Identities=10% Similarity=-0.064 Sum_probs=96.6
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEE--EEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccC
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYA--VCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKY 284 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~--v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~ 284 (369)
+..+.+.+.++.|+.+|++++ +.++.+ .. ...+. +++..+-.....-.++.+.+||..+.+.+.++... .
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tg---kv~~~~-l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~- 136 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESA---QPVWME-RL--GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-G- 136 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCS---SCSEEE-EC--TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-S-
T ss_pred CEEEEEcCCCCEEEEEECCCC---cEEeEE-CC--CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-C-
Confidence 345556777889999999998 666665 33 33333 55543224444556889999999999999988743 2
Q ss_pred ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeee-----EcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 285 EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFS-----KCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~-----~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.=..++ + |++.|+.+..+++|.++|..+.+.+..+.-..+-..+. .+.+|.+.+..-.+..|.+-|.++++.
T Consensus 137 eGwGLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 137 EGWGLC--Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp CCCCEE--E-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred ceeEEe--c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence 223444 5 67777777678999999999988877774311001111 123787666666788999999999873
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.0028 Score=54.88 Aligned_cols=190 Identities=14% Similarity=0.123 Sum_probs=113.4
Q ss_pred cccccCCcc--ceeeEEEEeecCCCCceEEEEEecCC--cEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC
Q 017601 84 SMLNRCPHR--SEVQSIALAETDSSGYMVLGSVDSYG--HLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 84 ~~~~~~~H~--~~V~~l~~s~~~~~~~~~las~d~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
.++...+|. .-.+.|.|+++ .+..|...+| .|+.+|+.++.. .....+... ..+ .++++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~-----~LyestG~~g~S~v~~vD~~tgkv---~~~~~l~~~--~fg----eGi~~~-- 73 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRG-----HLYESTGETGRSSVRKVDLETGRI---LQRAEVPPP--YFG----AGIVAW-- 73 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETT-----EEEEEECCTTSCEEEEEETTTCCE---EEEEECCTT--CCE----EEEEEE--
T ss_pred EEEEEcCCCCccccccEEEECC-----EEEEECCCCCCceEEEEECCCCCE---EEEEeCCCC--cce----eEEEEe--
Confidence 444444665 44789999763 4555555544 788888876521 111112111 111 145554
Q ss_pred CceeEEEEecccceEEEEeCCc--ceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee
Q 017601 160 QWSMAAVARSFSKSIDVYDQDI--HLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 160 ~~~~~a~~~s~d~~i~lwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
++.++... -.++.+.+||... .+.++.... ....... ++..|+.+..+++|.++|..+. +.+.++.
T Consensus 74 ~~~ly~lt-w~~~~v~v~D~~tl~~~~ti~~~~--~Gwglt~------dg~~L~vSdgs~~l~~iDp~t~---~~~~~I~ 141 (243)
T 3mbr_X 74 RDRLIQLT-WRNHEGFVYDLATLTPRARFRYPG--EGWALTS------DDSHLYMSDGTAVIRKLDPDTL---QQVGSIK 141 (243)
T ss_dssp TTEEEEEE-SSSSEEEEEETTTTEEEEEEECSS--CCCEEEE------CSSCEEEECSSSEEEEECTTTC---CEEEEEE
T ss_pred CCEEEEEE-eeCCEEEEEECCcCcEEEEEeCCC--CceEEee------CCCEEEEECCCCeEEEEeCCCC---eEEEEEE
Confidence 34455555 6789999999863 344443322 2222222 3556666556789999999987 6666655
Q ss_pred ccC----CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccc------------ccCceEEEEEcCCCCCEEE
Q 017601 238 GSV----GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHC------------SKYEITGLSFSSIDSNYIY 300 (369)
Q Consensus 238 ~~~----~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h------------~~~~v~~l~~sp~d~~~l~ 300 (369)
... -..++.+.|. +| .+|..-.+..|.+.|.++++.+..+.-. ..+-.+.|+++| +++.|.
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~-~~~~lf 219 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA-EHDRLF 219 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET-TTTEEE
T ss_pred EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC-CCCEEE
Confidence 320 1356677766 66 4444446789999999999988765411 013468899999 666655
Q ss_pred EEE
Q 017601 301 VQG 303 (369)
Q Consensus 301 s~s 303 (369)
..+
T Consensus 220 VTG 222 (243)
T 3mbr_X 220 VTG 222 (243)
T ss_dssp EEE
T ss_pred EEC
Confidence 554
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.99 E-value=0.0001 Score=64.54 Aligned_cols=142 Identities=9% Similarity=0.001 Sum_probs=95.2
Q ss_pred CCcEEEEEcCC--eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccc
Q 017601 207 GPNMLAVTEGC--QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCS 282 (369)
Q Consensus 207 ~~~lla~s~d~--~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~ 282 (369)
+..+.+.+.+| .|+.+|++++ +.++++... .........+++ .| ...-.++.+.+||..+.+.+.++...
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tg---kv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~- 126 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESG---KTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD- 126 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTC---CEEEEEECC--TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECS-
T ss_pred CEEEEECCCCCCceEEEEECCCC---cEEEEEecC--CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC-
Confidence 44555666665 8999999999 777777654 444443333345 44 44446889999999999999888743
Q ss_pred cCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcC--C----CeeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 283 KYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGD--S----NWLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 283 ~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~--~----~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
.. =..+ ++ |++.|+.+..+++|.++|..+.+.+..+.-. . ....+. ..+|.+.+..-.+..|.+.|.++
T Consensus 127 ~e-G~gl--t~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe-~~~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 127 GE-GWGL--TH-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE-WVDGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp SC-CCCE--EE-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE-EETTEEEEEETTSSEEEEECTTT
T ss_pred CC-ceEE--ec-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE-EECCEEEEEEccCCeEEEEECCC
Confidence 21 1333 35 6666666555788999999998877776431 1 001122 23777666666789999999998
Q ss_pred Ccc
Q 017601 357 KEN 359 (369)
Q Consensus 357 ~~~ 359 (369)
++.
T Consensus 202 G~V 204 (262)
T 3nol_A 202 GKV 204 (262)
T ss_dssp CBE
T ss_pred CcE
Confidence 873
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.98 E-value=3.8e-05 Score=71.31 Aligned_cols=126 Identities=12% Similarity=-0.023 Sum_probs=87.8
Q ss_pred eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe----------CCCcEEEEeCCCceeeeecccc-----
Q 017601 218 QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG----------ADRTVTIYDPRRWSALSRWVHC----- 281 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs----------~D~~v~vwD~~~~~~~~~~~~h----- 281 (369)
+|.++|..+. +.+.++... ..+ .++|+||+ +++++. .+++|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~---~v~~~i~vG-~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCG---VTLGHSLGA-FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTT---EEEEEEEEC-TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECCCC---eEEEEEeCC-CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence 8889999998 788888754 345 79999999 777765 3789999999999999887532
Q ss_pred -ccCceEEEEEcCCCCCEEEEEEC--CCeEEE--EECcCCceeEEEEcCCCeeeeeEcC-CCCEEEEEeCCCcEEEEECC
Q 017601 282 -SKYEITGLSFSSIDSNYIYVQGV--DYEVFC--GQWRESSKVFAFRGDSNWLGFSKCS-NRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 282 -~~~~v~~l~~sp~d~~~l~s~s~--D~~i~v--wd~~~~~~~~~~~g~~~~~~~~~~~-d~~~l~sgs~dg~I~iWd~~ 355 (369)
.......++|+| ||++++.+.. +..+.+ +|..+ +..+.-... +...+ ....+++.+.||.+.+.|.+
T Consensus 121 ~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 121 SVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp CBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECC
T ss_pred ccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECc
Confidence 012356899999 9999988875 467888 99877 333321110 00112 22345566667777777776
Q ss_pred C
Q 017601 356 A 356 (369)
Q Consensus 356 ~ 356 (369)
+
T Consensus 194 ~ 194 (368)
T 1mda_H 194 A 194 (368)
T ss_dssp S
T ss_pred c
Confidence 5
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.92 E-value=0.0011 Score=66.70 Aligned_cols=137 Identities=9% Similarity=0.031 Sum_probs=88.3
Q ss_pred eEEEEeCCcccCCceeeeeec--cC------CCcEEEEEECCCC----cEEEEeCCCcEEEEeCCCceeeeecccccc--
Q 017601 218 QLTIWDLRMKENGGCLHRICG--SV------GDILYAVCSSSTG----NIAVAGADRTVTIYDPRRWSALSRWVHCSK-- 283 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~--~~------~~~v~~v~~sp~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~~-- 283 (369)
.|.-+|.+++ +.+-.++. +. ..+.....+..+| .++.++.+|.+.++|.++++.+...... .
T Consensus 271 ~v~AlD~~tG---~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~-~~~ 346 (668)
T 1kv9_A 271 SILAIRPDTG---KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFG-KVT 346 (668)
T ss_dssp EEEEECTTTC---CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS-CCC
T ss_pred eEEEEcCCCC---ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccc-ccc
Confidence 4999999998 55544442 10 0222222333355 4888999999999999999887432211 0
Q ss_pred ----------Cc------------------------eEEEEEcCCCCCEEEEE---------------------------
Q 017601 284 ----------YE------------------------ITGLSFSSIDSNYIYVQ--------------------------- 302 (369)
Q Consensus 284 ----------~~------------------------v~~l~~sp~d~~~l~s~--------------------------- 302 (369)
.+ -..++++| +..+++..
T Consensus 347 w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 347 WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred cccccccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCEEEEeccccceEeeeeccccccccccccCccc
Confidence 00 01267778 55555431
Q ss_pred ---------ECCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 303 ---------GVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 ---------s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
..++.|..||+.+++.+-.+..+..+.+......+.+++.++.|+.++.||.++++.
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 134889999999998876665433222222223678889999999999999999874
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.85 E-value=0.00023 Score=61.65 Aligned_cols=142 Identities=13% Similarity=-0.003 Sum_probs=93.6
Q ss_pred CcEEEEEcC--CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeecccccc
Q 017601 208 PNMLAVTEG--CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRWVHCSK 283 (369)
Q Consensus 208 ~~lla~s~d--~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~~~h~~ 283 (369)
..+.+.+.+ +.|+.+|++++ +.++++... .........+.+ .....-.++.+.+||..+.+.+.++... .
T Consensus 32 ~LyestG~~g~S~v~~vD~~tg---kv~~~~~l~--~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~-~ 105 (243)
T 3mbr_X 32 HLYESTGETGRSSVRKVDLETG---RILQRAEVP--PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP-G 105 (243)
T ss_dssp EEEEEECCTTSCEEEEEETTTC---CEEEEEECC--TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS-S
T ss_pred EEEEECCCCCCceEEEEECCCC---CEEEEEeCC--CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC-C
Confidence 344455554 48999999998 777777654 333333333334 4444567899999999999999988754 2
Q ss_pred CceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeee-----EcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 284 YEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFS-----KCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 284 ~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~-----~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
. =..++ + ++..|+.+..+++|.++|..+.+.+..+.-..+-..+. .+.+|.+.+..-.+..|.+-|.++++
T Consensus 106 ~-Gwglt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 106 E-GWALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp C-CCEEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCB
T ss_pred C-ceEEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCC
Confidence 2 23444 4 55655555568899999999988777774311001111 12377766666678899999999887
Q ss_pred c
Q 017601 359 N 359 (369)
Q Consensus 359 ~ 359 (369)
.
T Consensus 182 V 182 (243)
T 3mbr_X 182 V 182 (243)
T ss_dssp E
T ss_pred E
Confidence 3
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.71 E-value=0.0045 Score=55.77 Aligned_cols=188 Identities=11% Similarity=-0.003 Sum_probs=107.4
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEee---------------------eCCcceeeeccCCCCCCCCcE
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTL---------------------WYPSSLNFVQNLSPVNGGPNM 210 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~---------------------~~~~~v~~~~~~~~~~~~~~l 210 (369)
+++|+++ ..++.++ ..++.|..||... ....+... ..+..+.+. ++++.|
T Consensus 23 ~i~~d~~-g~~l~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~------~~~g~l 94 (322)
T 2fp8_A 23 SFTFDST-NKGFYTS-VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYN------LQNNQL 94 (322)
T ss_dssp CEECCTT-CSSEEEE-CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEE------TTTTEE
T ss_pred EEEEcCC-CCEEEEE-cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEc------CCCCcE
Confidence 5889885 4445555 6788899998753 33333211 012222222 223466
Q ss_pred EEEEcCCeEEEEeCCcccCCceeeeeec----cCCCcEEEEEECC-CC-cEEEEeC-----------------CCcEEEE
Q 017601 211 LAVTEGCQLTIWDLRMKENGGCLHRICG----SVGDILYAVCSSS-TG-NIAVAGA-----------------DRTVTIY 267 (369)
Q Consensus 211 la~s~d~~v~iwD~~~~~~~~~~~~~~~----~~~~~v~~v~~sp-~g-~lasgs~-----------------D~~v~vw 267 (369)
+.+...+.+..+|..++ . +..+.. ......+.+++.+ +| ..++-.. ++.|..|
T Consensus 95 ~v~d~~~~i~~~d~~~g---~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGG---H-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EEEETTTEEEEECTTCE---E-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred EEEECCCCEEEEeCCCC---E-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 66655566888987654 1 222211 1023578899999 88 4333221 3678889
Q ss_pred eCCCceeeeeccccccCceEEEEEcCCCCCEEEEE-ECCCeEEEEECcCCc--eeEEEEcCCCeeeeeEcCCCCEEEEEe
Q 017601 268 DPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQ-GVDYEVFCGQWRESS--KVFAFRGDSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 268 D~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~-s~D~~i~vwd~~~~~--~~~~~~g~~~~~~~~~~~d~~~l~sgs 344 (369)
|..+++...... . ......++|+| +++.|+.+ ...+.|..+|+.... ....+.....-.++...++|.+.++..
T Consensus 171 d~~~~~~~~~~~-~-~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 171 DPSTKETTLLLK-E-LHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSS 247 (322)
T ss_dssp ETTTTEEEEEEE-E-ESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEE
T ss_pred eCCCCEEEEecc-C-CccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEec
Confidence 987665432222 1 23457899999 99866554 556899999987521 111221111024555556788766655
Q ss_pred C----------CCcEEEEECC
Q 017601 345 D----------SGSIFVADVV 355 (369)
Q Consensus 345 ~----------dg~I~iWd~~ 355 (369)
. .+.|..+|..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTT
T ss_pred CcccccccCCCccEEEEECCC
Confidence 4 4667777753
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.69 E-value=0.023 Score=55.84 Aligned_cols=136 Identities=7% Similarity=-0.082 Sum_probs=87.3
Q ss_pred eEEEEeCCcccCCceeeeeeccC---------CCcEEEEEECCCC----cEEEEeCCCcEEEEeCCCceeeeecccccc-
Q 017601 218 QLTIWDLRMKENGGCLHRICGSV---------GDILYAVCSSSTG----NIAVAGADRTVTIYDPRRWSALSRWVHCSK- 283 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~~~---------~~~v~~v~~sp~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~~- 283 (369)
.|..+|.+++ +.+-.++... ..++. +...++| .++.++.+|.+.++|.++++.+....-. .
T Consensus 273 ~v~Ald~~tG---~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~-~~ 347 (571)
T 2ad6_A 273 TIWGRDLDTG---MAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD-PA 347 (571)
T ss_dssp EEEEEETTTC---CEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS-TT
T ss_pred EEEEEecCCC---cEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc-CC
Confidence 6899999988 5554443210 12222 2223466 3677889999999999998887654311 0
Q ss_pred ------------Cce--------------------------EEEEEcCCCCCEEEEEE----------------------
Q 017601 284 ------------YEI--------------------------TGLSFSSIDSNYIYVQG---------------------- 303 (369)
Q Consensus 284 ------------~~v--------------------------~~l~~sp~d~~~l~s~s---------------------- 303 (369)
.++ ..++|+| +..+++..+
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCcccc
Confidence 111 2457888 666666543
Q ss_pred ---------------CCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 304 ---------------VDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 304 ---------------~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.++.|..||..+++.+-.+.......+......+.+++.++.||.|+.||.++++.
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 35789999999998876664332111111122467788899999999999999874
No 253
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.69 E-value=0.015 Score=53.04 Aligned_cols=194 Identities=13% Similarity=0.163 Sum_probs=116.5
Q ss_pred eEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC----Cce--e-EEEEecc--cceEEEEeC
Q 017601 109 MVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS----QWS--M-AAVARSF--SKSIDVYDQ 179 (369)
Q Consensus 109 ~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~----~~~--~-~a~~~s~--d~~i~lwd~ 179 (369)
.++.+.++.+-+.++|++.. .+. .+.. +...++.+-|. +.. + +++. -. +.+|++|++
T Consensus 41 s~ii~t~k~~gL~Vydl~G~--~l~----~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~i 106 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGK--MLH----SYNT-------GKLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAI 106 (355)
T ss_dssp CEEEEEETTTEEEEEETTSC--EEE----EECC-------SCEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEE
T ss_pred cEEEEEcCCCCEEEEcCCCc--EEE----EccC-------CCcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEE
Confidence 45666677888999998522 111 1110 12334555441 111 2 2333 33 578999966
Q ss_pred C---cceEEEEe-------e-eCCcceeeeccCCCCCCCC--cEEEEEcCCeEEEEeCCccc----CCceeeeeeccCCC
Q 017601 180 D---IHLRTLRT-------L-WYPSSLNFVQNLSPVNGGP--NMLAVTEGCQLTIWDLRMKE----NGGCLHRICGSVGD 242 (369)
Q Consensus 180 ~---~~~~~~~~-------~-~~~~~v~~~~~~~~~~~~~--~lla~s~d~~v~iwD~~~~~----~~~~~~~~~~~~~~ 242 (369)
+ ..+..+.. . ..+..+..... +..+ +++....++.+..|++.... ..+.++++... .
T Consensus 107 Dp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~----~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--s 180 (355)
T 3amr_A 107 DGKNGTLQSMTDPDHPIATAINEVYGFTLYHS----QKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--S 180 (355)
T ss_dssp CTTTCCEEECSCTTSCEECCCSSCCCEEEEEC----TTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--S
T ss_pred CCCCCceeeccccccCcCCCCCCeeEEEEEec----CCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--C
Confidence 3 23333310 0 23334444331 3233 35556678999999984321 12567777765 7
Q ss_pred cEEEEEECCCC-cEEEEeCCCcEEEEeCC-----Cceeeeec-cccccCceEEEEE--cCCCCC-EEEEEE-CCCeEEEE
Q 017601 243 ILYAVCSSSTG-NIAVAGADRTVTIYDPR-----RWSALSRW-VHCSKYEITGLSF--SSIDSN-YIYVQG-VDYEVFCG 311 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D~~v~vwD~~-----~~~~~~~~-~~h~~~~v~~l~~--sp~d~~-~l~s~s-~D~~i~vw 311 (369)
.+-.|...+.. .|+.+-+|.-|..+|.+ +++.+..+ .+++...+..|++ .+ +++ +|++++ .+++..+|
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~-~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA-DGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG-GGCEEEEEEEGGGTEEEEE
T ss_pred CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC-CCCEEEEEEcCCCCEEEEE
Confidence 78888888877 99999999877777755 34555554 3454567888888 45 555 566655 57799999
Q ss_pred ECc-CCceeEEEE
Q 017601 312 QWR-ESSKVFAFR 323 (369)
Q Consensus 312 d~~-~~~~~~~~~ 323 (369)
|.+ +.+.+..|+
T Consensus 260 dr~~~~~~vg~f~ 272 (355)
T 3amr_A 260 DRQGKNKYVADFR 272 (355)
T ss_dssp ESSTTCCEEEEEE
T ss_pred ECCCCCcEEEEEE
Confidence 997 677777774
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.66 E-value=0.032 Score=51.83 Aligned_cols=203 Identities=9% Similarity=-0.042 Sum_probs=110.9
Q ss_pred ceeeEEEEeecCCCCceEEEEEe-cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVD-SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d-~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....++|++.+ ..|.-.| ..+.|+.++.+.... ...+.... ..-.++++.+.+..++.+- ...
T Consensus 116 ~~~~gl~~d~~~----~~ly~~D~~~~~I~r~~~~g~~~-----~~~~~~~~-----~~p~glavd~~~g~lY~~d-~~~ 180 (386)
T 3v65_B 116 ENAIALDFHHRR----ELVFWSDVTLDRILRANLNGSNV-----EEVVSTGL-----ESPGGLAVDWVHDKLYWTD-SGT 180 (386)
T ss_dssp SCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCCE-----EEEECSSC-----SCCCCEEEETTTTEEEEEE-TTT
T ss_pred CccEEEEEecCC----CeEEEEeCCCCcEEEEecCCCCc-----EEEEeCCC-----CCccEEEEEeCCCeEEEEc-CCC
Confidence 346788998753 2444334 456777777654310 00011000 0112688988666655555 667
Q ss_pred ceEEEEeCCcce-EEEEe--eeCCcceeeeccCCCCCCCCcEEEEE-cC-CeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIHL-RTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVT-EG-CQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s-~d-~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.+.+.+... ..+.. ...|..+..- |.++.|..+. .. +.|..+|+... ....+........+.
T Consensus 181 ~~I~~~~~dg~~~~~l~~~~l~~P~giavd------p~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 181 SRIEVANLDGAHRKVLLWQSLEKPRAIALH------PMEGTIYWTDWGNTPRIEASSMDGS----GRRIIADTHLFWPNG 250 (386)
T ss_dssp TEEEECBTTSCSCEEEECSSCSCEEEEEEE------TTTTEEEEEECSSSCEEEEEETTSC----SCEEEECSSCSCEEE
T ss_pred CeEEEEeCCCCceEEeecCCCCCCcEEEEE------cCCCeEEEeccCCCCEEEEEeCCCC----CcEEEEECCCCCeee
Confidence 889988875332 22211 1233444433 2334443332 33 67888887643 222222111355789
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
|+|+|++ .| .+-+..+.|..+|+........+... .....++++ . .+.++.+-...+.|..+|..+++....+.
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav-~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-F-EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEE-E-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 9999876 44 45556778999998643222222222 334677887 3 45666666667889998866665555543
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.65 E-value=0.026 Score=49.23 Aligned_cols=194 Identities=9% Similarity=0.047 Sum_probs=113.6
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCC-cceEEEEee--eCCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCC
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQD-IHLRTLRTL--WYPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLR 225 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~ 225 (369)
...+++|+|+++.++++. ..++.|...|.. +..+.+... .....+++.. ++.++.+. .++.+.++++.
T Consensus 28 ~lSGla~~~~~~~L~aV~-d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-------~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTI-NKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-------DNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CEEEEEEETTTTEEEEEE-ETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-------TTEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEeCCCCEEEEEE-CCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-------CCEEEEEECCCCcEEEEEcC
Confidence 367999999777777776 668888888876 333333221 1334444443 23454444 46788899876
Q ss_pred cccCCceeeeeec-----cCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCC---Cceeeeec-----c--ccccCceEEE
Q 017601 226 MKENGGCLHRICG-----SVGDILYAVCSSSTG-NIAVAGADRTVTIYDPR---RWSALSRW-----V--HCSKYEITGL 289 (369)
Q Consensus 226 ~~~~~~~~~~~~~-----~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~---~~~~~~~~-----~--~h~~~~v~~l 289 (369)
.......+..... ......-.++|+|.+ .|.++.+.....||.+. ....+..+ . .+ .....++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~-~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT-LDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC-SSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc-cCCceeE
Confidence 5421111222211 113456899999999 66666665555555543 11111111 1 13 3457899
Q ss_pred EEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE---cC-------CCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 290 SFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR---GD-------SNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 290 ~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~---g~-------~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
++.|..+++++.....+.+..+|.+. +.+..+. +. ....++...++|+ |+..|+-+.++++.-
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence 99996666676666778899999764 3444442 21 1224566666887 444588887777653
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.64 E-value=0.032 Score=52.08 Aligned_cols=196 Identities=9% Similarity=-0.077 Sum_probs=111.4
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCcc-----eEEEE--eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEe
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH-----LRTLR--TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWD 223 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~-----~~~~~--~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD 223 (369)
..+++|++.++.++.+- ...+.|..++.+.. ...+. ....+..+++-. ..+..+++-...+.|.+.|
T Consensus 114 ~~~l~~d~~~~~lywsD-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~-----~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW-----IHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp EEEEEEETTTTEEEEEE-TTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET-----TTTEEEEEETTTTEEEEEC
T ss_pred ceEEeeeeccCceEEEe-cCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe-----cCCceEEEECCCCeEEEEe
Confidence 45899998666555554 66788888886531 11111 111233333321 1122333444567899998
Q ss_pred CCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe--CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEE
Q 017601 224 LRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG--ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIY 300 (369)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs--~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~ 300 (369)
+... .....+... ......|++.|.+ .|+... ..+.|...++........+... -.....|+++| ++..|+
T Consensus 188 ~~g~---~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~-l~~P~glavd~-~~~~lY 261 (400)
T 3p5b_L 188 TKGV---KRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDL-LSGRLY 261 (400)
T ss_dssp TTTC---SEEEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS-CSCEEEEEEET-TTTEEE
T ss_pred CCCC---ceEEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC-CCceEEEEEEe-CCCEEE
Confidence 8754 222223222 3568899999965 544443 2478888887643322222223 35678999998 666665
Q ss_pred EE-ECCCeEEEEECcCCceeEEEEcCC---CeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 301 VQ-GVDYEVFCGQWRESSKVFAFRGDS---NWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 301 s~-s~D~~i~vwd~~~~~~~~~~~g~~---~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.+ +..+.|...|+..........+.. .-.++.. ..+.++.+-...+.|..+|..+++.
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 262 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSSCCC
T ss_pred EEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCCCCc
Confidence 55 456789999987644333333211 0123332 2445666777788999999777653
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.58 E-value=0.031 Score=51.89 Aligned_cols=194 Identities=9% Similarity=-0.066 Sum_probs=111.4
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCcc-eEEEEe--eeCCcceeeeccCCCCCCCCcE-EEEEcCCeEEEEeCCc
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH-LRTLRT--LWYPSSLNFVQNLSPVNGGPNM-LAVTEGCQLTIWDLRM 226 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD~~~ 226 (369)
..+++|++.+..++.+- ...+.|..++.+.. ...+.. ...+..+.+-. .++.| ++-...+.|.+.++..
T Consensus 118 ~~gl~~d~~~~~ly~~D-~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~------~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 118 AIALDFHHRRELVFWSD-VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW------VHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp EEEEEEETTTTEEEEEE-TTTTEEEEEETTSCCEEEEECSSCSCCCCEEEET------TTTEEEEEETTTTEEEECBTTS
T ss_pred cEEEEEecCCCeEEEEe-CCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEe------CCCeEEEEcCCCCeEEEEeCCC
Confidence 44899998666555554 67788999987532 222211 12344444432 23333 4444567888888764
Q ss_pred ccCCceeeeeeccCCCcEEEEEECCCC-cE-EEEeCC-CcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEE-EE
Q 017601 227 KENGGCLHRICGSVGDILYAVCSSSTG-NI-AVAGAD-RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIY-VQ 302 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~sp~g-~l-asgs~D-~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~-s~ 302 (369)
. .....+... ....+.++++|.+ .| .+-... +.|..+|+............ -...+.|+|+| ++..|+ +-
T Consensus 191 ~---~~~~l~~~~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~-~~~~lY~aD 264 (386)
T 3v65_B 191 A---HRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH-LFWPNGLTIDY-AGRRMYWVD 264 (386)
T ss_dssp C---SCEEEECSS-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-CSCEEEEEEEG-GGTEEEEEE
T ss_pred C---ceEEeecCC-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeC-CCCEEEEEE
Confidence 3 222222222 3567899999876 44 444444 78888887643222222222 34578999998 555554 44
Q ss_pred ECCCeEEEEECcCCceeEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 303 GVDYEVFCGQWRESSKVFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+..+.|..+|+........+... ..-.++.. .++.++.+-...+.|..++..+++
T Consensus 265 ~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 265 AKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp TTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCc
Confidence 55678999998754333333211 11134443 345566677778889888865654
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.57 E-value=0.037 Score=50.62 Aligned_cols=191 Identities=8% Similarity=-0.073 Sum_probs=111.2
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEe--eeCCcceeeeccCCCCCCCCcE-EEEEcCCeEEEEeCCc
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRT--LWYPSSLNFVQNLSPVNGGPNM-LAVTEGCQLTIWDLRM 226 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD~~~ 226 (369)
..+++|++.+..++.+- ...+.|..++.+. ....+.. ...+..+.+-. .++.| ++-...+.|.+.++..
T Consensus 75 ~~~l~~d~~~~~ly~~D-~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~------~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 75 AIALDFHHRRELVFWSD-VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW------VHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp EEEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred eEEEEEeccccEEEEEe-ccCCceEEEecCCCCceEEEeCCCCCccEEEEec------CCCeEEEEcCCCCeEEEEcCCC
Confidence 34799998666555554 6778898888753 2222211 12344444432 23333 4444567899999875
Q ss_pred ccCCceeeeeeccCCCcEEEEEECCCC--cEEEEeCC-CcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCCEEEEE
Q 017601 227 KENGGCLHRICGSVGDILYAVCSSSTG--NIAVAGAD-RTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~sp~g--~lasgs~D-~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
. .....+... ....+.++++|.+ ++.+-... +.|..+++... ....+. .. -.....|+|+| ++..|+.+
T Consensus 148 ~---~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~-~~~PnGla~d~-~~~~lY~a 220 (349)
T 3v64_C 148 A---HRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTH-LFWPNGLTIDY-AGRRMYWV 220 (349)
T ss_dssp C---SCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSS-CSCEEEEEEET-TTTEEEEE
T ss_pred C---ceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECC-CCCcceEEEeC-CCCEEEEE
Confidence 4 222222222 3567899999965 44444444 78888887643 333332 22 34578999998 55555544
Q ss_pred -ECCCeEEEEECcCCceeEEEEc---CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 303 -GVDYEVFCGQWRESSKVFAFRG---DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 303 -s~D~~i~vwd~~~~~~~~~~~g---~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+..+.|..+|+........+.. +. .++.. .++.+.++-...+.|...+..+++
T Consensus 221 D~~~~~I~~~~~dG~~~~~~~~~~~~~P--~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 221 DAKHHVIERANLDGSHRKAVISQGLPHP--FAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSE--EEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCEEEEEeCCCCceEEEEeCCCCCc--eEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 4567899999875433332321 22 34443 345566666677888888865554
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.55 E-value=0.043 Score=49.33 Aligned_cols=192 Identities=9% Similarity=-0.053 Sum_probs=110.0
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCc-----ceEEEE--eeeCCcceeeeccCCCCCCCCcE-EEEEcCCeEEEEe
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDI-----HLRTLR--TLWYPSSLNFVQNLSPVNGGPNM-LAVTEGCQLTIWD 223 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-----~~~~~~--~~~~~~~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD 223 (369)
.+++|++.++.++.+- ...+.|..++.+. ....+. ....+..+.+-. .++.| ++-...+.|.+.|
T Consensus 33 ~g~~~d~~~~~ly~~D-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~------~~~~ly~~d~~~~~I~~~~ 105 (316)
T 1ijq_A 33 VALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW------IHSNIYWTDSVLGTVSVAD 105 (316)
T ss_dssp EEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCCCEEEEET------TTTEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCEEEEEE-CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee------cCCeEEEEECCCCEEEEEe
Confidence 4799998666555555 6778999998753 112221 112344444321 13333 4445578899999
Q ss_pred CCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC-C-CcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCCEE
Q 017601 224 LRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA-D-RTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSNYI 299 (369)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~-D-~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~~l 299 (369)
+... .....+... ......++++|.+ .|..+.. . +.|..+++.. +....+. .. -.....++++| ++..|
T Consensus 106 ~~g~---~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~-~~~P~gla~d~-~~~~l 178 (316)
T 1ijq_A 106 TKGV---KRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN-IQWPNGITLDL-LSGRL 178 (316)
T ss_dssp TTSS---SEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSS-CSCEEEEEEET-TTTEE
T ss_pred CCCC---ceEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECC-CCCceEEEEec-cCCEE
Confidence 8643 222222222 3567899999866 4444443 3 6888888753 3333322 22 34578999999 66665
Q ss_pred EEE-ECCCeEEEEECcCCceeEEEEcC---CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 300 YVQ-GVDYEVFCGQWRESSKVFAFRGD---SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 300 ~s~-s~D~~i~vwd~~~~~~~~~~~g~---~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+.+ +..+.|..+|+............ ..-.++.. ..+.++++-...+.|..++..+++
T Consensus 179 Y~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav-~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 179 YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEE-ECCEEEEEECCCCeEEEEeCCCCc
Confidence 554 45679999999753332222221 11133433 245566666677899999877665
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.55 E-value=0.001 Score=66.60 Aligned_cols=194 Identities=6% Similarity=-0.080 Sum_probs=101.9
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEE-EEeeeCC---cceeeeccCCCCCCCCcEEEEE-cC-----CeEEEE
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRT-LRTLWYP---SSLNFVQNLSPVNGGPNMLAVT-EG-----CQLTIW 222 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~-~~~~~~~---~~v~~~~~~~~~~~~~~lla~s-~d-----~~v~iw 222 (369)
++++.+ ++.++++++..+..+.+||....... +.....+ ..+..+ +++..++.++ .+ ..+.+|
T Consensus 247 ~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~------~dg~iyv~GG~~~~~~~~~~~e~y 319 (656)
T 1k3i_A 247 GISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM------SDGRVFTIGGSWSGGVFEKNGEVY 319 (656)
T ss_dssp EEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC------TTSCEEEECCCCCSSSCCCCEEEE
T ss_pred cccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEe------cCCeEEEEeCcccCCcccccceEe
Confidence 467777 45677777445678999997643222 1111111 111222 2344555555 33 579999
Q ss_pred eCCcccCCceeeeeec----cCCCcEEEEEECCCC-cEEEEeCC---------CcEEEEeCCCceeeeecccccc-----
Q 017601 223 DLRMKENGGCLHRICG----SVGDILYAVCSSSTG-NIAVAGAD---------RTVTIYDPRRWSALSRWVHCSK----- 283 (369)
Q Consensus 223 D~~~~~~~~~~~~~~~----~~~~~v~~v~~sp~g-~lasgs~D---------~~v~vwD~~~~~~~~~~~~h~~----- 283 (369)
|..+. +... +.. .....-....+..++ .++.|+.| ..+..||..+.........+ .
T Consensus 320 d~~t~---~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~-~~~~~~ 394 (656)
T 1k3i_A 320 SPSSK---TWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR-QSNRGV 394 (656)
T ss_dssp ETTTT---EEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEEC-EETTEE
T ss_pred CCCCC---ccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcc-cccccc
Confidence 99875 3221 100 000000001223445 44555444 45788898775433222211 1
Q ss_pred ----CceEEEEEcCCCCCEEEEEECCC-----------eEEEEECcCCceeEEE--EcC-CC-eeeeeEcCCCCEEEEEe
Q 017601 284 ----YEITGLSFSSIDSNYIYVQGVDY-----------EVFCGQWRESSKVFAF--RGD-SN-WLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 284 ----~~v~~l~~sp~d~~~l~s~s~D~-----------~i~vwd~~~~~~~~~~--~g~-~~-~~~~~~~~d~~~l~sgs 344 (369)
..-.++.|...++++++.||.+. .|.+||..+....... ..+ .+ +......+++++++.|+
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence 12345556544778888888543 6788888775543332 111 11 12223356899999888
Q ss_pred CC-----------CcEEEEECCCCc
Q 017601 345 DS-----------GSIFVADVVAKE 358 (369)
Q Consensus 345 ~d-----------g~I~iWd~~~~~ 358 (369)
.+ ..+.+||.++.+
T Consensus 475 ~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 475 QRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp BSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred cccCcCcCCCCcccceEEEcCCCCc
Confidence 65 568999987654
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.48 E-value=0.051 Score=48.42 Aligned_cols=186 Identities=11% Similarity=-0.030 Sum_probs=104.3
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEEE-EeeeCCcceeeeccCCCCCCCCcEEEEEcC--CeEEEEeCCcccC
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTL-RTLWYPSSLNFVQNLSPVNGGPNMLAVTEG--CQLTIWDLRMKEN 229 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~lla~s~d--~~v~iwD~~~~~~ 229 (369)
+++|+++ ..++++. ..++.|..||........ .....+..+.+ ++++..+++.... ..|..+|..++
T Consensus 36 gia~~~~-g~lyv~d-~~~~~I~~~d~~g~~~~~~~~~~~p~gia~------~~dG~l~vad~~~~~~~v~~~d~~~g-- 105 (306)
T 2p4o_A 36 NLASAPD-GTIFVTN-HEVGEIVSITPDGNQQIHATVEGKVSGLAF------TSNGDLVATGWNADSIPVVSLVKSDG-- 105 (306)
T ss_dssp EEEECTT-SCEEEEE-TTTTEEEEECTTCCEEEEEECSSEEEEEEE------CTTSCEEEEEECTTSCEEEEEECTTS--
T ss_pred eEEECCC-CCEEEEe-CCCCeEEEECCCCceEEEEeCCCCceeEEE------cCCCcEEEEeccCCcceEEEEcCCCC--
Confidence 7999994 4455554 678899999875433222 11112233332 2455544443322 24667777665
Q ss_pred CceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCce--eee--------eccccccCceEEEEEcCCCCCE
Q 017601 230 GGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWS--ALS--------RWVHCSKYEITGLSFSSIDSNY 298 (369)
Q Consensus 230 ~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~--~~~--------~~~~h~~~~v~~l~~sp~d~~~ 298 (369)
+...............+++.+++ .+++-..++.|.++|..+++ ... ..... -.....+ +| +++.
T Consensus 106 -~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~pngi--s~-dg~~ 180 (306)
T 2p4o_A 106 -TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAANGL--KR-FGNF 180 (306)
T ss_dssp -CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSEEEE--EE-ETTE
T ss_pred -eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC-CCcCCCc--Cc-CCCE
Confidence 33221221112344666666666 55555568899999987542 210 01111 1234555 78 7776
Q ss_pred EEE-EECCCeEEEEECcC-Cce--eEEEE--cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECC
Q 017601 299 IYV-QGVDYEVFCGQWRE-SSK--VFAFR--GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 299 l~s-~s~D~~i~vwd~~~-~~~--~~~~~--g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~ 355 (369)
|+. -...++|..+|+.. ++. ...+. ... .++...++|.++++-...+.|.++|..
T Consensus 181 lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P--~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI--DDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCC--SSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCC--CCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 554 45578999999875 321 12221 122 345556688888887788999999875
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.45 E-value=0.076 Score=52.36 Aligned_cols=137 Identities=8% Similarity=-0.068 Sum_probs=85.4
Q ss_pred CeEEEEeCCcccCCceeeeeeccC---------CCcEEEEEEC-CCC----cEEEEeCCCcEEEEeCCCceeeeeccccc
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSV---------GDILYAVCSS-STG----NIAVAGADRTVTIYDPRRWSALSRWVHCS 282 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~---------~~~v~~v~~s-p~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~ 282 (369)
+.|.-+|.+++ +.+-.++... ..++. +... .+| .++.++.+|.+.++|.++++.+....-..
T Consensus 278 ~sv~Ald~~TG---~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 353 (599)
T 1w6s_A 278 MTIFGRDADTG---EAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDD 353 (599)
T ss_dssp SEEEEEETTTC---CEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred ceEEEEeCCCC---ceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccC
Confidence 37999999998 5554444210 01222 2222 456 46678899999999999998875443110
Q ss_pred ------------cCce--------------------------EEEEEcCCCCCEEEEEE---------------------
Q 017601 283 ------------KYEI--------------------------TGLSFSSIDSNYIYVQG--------------------- 303 (369)
Q Consensus 283 ------------~~~v--------------------------~~l~~sp~d~~~l~s~s--------------------- 303 (369)
..++ ..++++| +.++++...
T Consensus 354 ~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~ 432 (599)
T 1w6s_A 354 TVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP-KRELFFMGINHICMDWEPFMLPYKAGQFFV 432 (599)
T ss_dssp TCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-CCCEEEEeccccceeeecccccccCCccee
Confidence 0011 2456777 555554421
Q ss_pred ------------------CCCeEEEEECcCCceeEEEE-cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 304 ------------------VDYEVFCGQWRESSKVFAFR-GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 304 ------------------~D~~i~vwd~~~~~~~~~~~-g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.++.+..||+.+++.+-.+. +...+.+. ....+.+++.++.||.++.||.++|+.
T Consensus 433 g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 433 GATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGT-MATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp CEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBC-EEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcc-eEecCCEEEEECCCCeEEEEECCCCCE
Confidence 34789999999988766654 22211111 112567888899999999999999974
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.42 E-value=0.052 Score=53.54 Aligned_cols=152 Identities=9% Similarity=-0.026 Sum_probs=86.7
Q ss_pred EEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEc------CCeEEEEeCCcccCCceeee
Q 017601 164 AAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE------GCQLTIWDLRMKENGGCLHR 235 (369)
Q Consensus 164 ~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~------d~~v~iwD~~~~~~~~~~~~ 235 (369)
+.++ +.|+.+.-+|.. +.+............ .+...|.- .++.++.++. ++.|.-+|.+++ +.+-+
T Consensus 124 V~v~-t~dg~l~AlDa~TG~~~W~~~~~~~~~~~-~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG---~~~W~ 197 (599)
T 1w6s_A 124 ILKT-QLDGNVAALNAETGETVWKVENSDIKVGS-TLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTG---EQVWR 197 (599)
T ss_dssp EEEE-CTTSEEEEEETTTCCEEEEEECCCGGGTC-BCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTC---CEEEE
T ss_pred EEEE-cCCCEEEEEECCCCCEEEeecCCCCCccc-eeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCC---cEEEE
Confidence 5566 678888888864 444333221110000 00000100 1345555442 789999999998 55544
Q ss_pred eeccCCC------------------------------------cE-EEEEECCCC-cEEEEeCC----------------
Q 017601 236 ICGSVGD------------------------------------IL-YAVCSSSTG-NIAVAGAD---------------- 261 (369)
Q Consensus 236 ~~~~~~~------------------------------------~v-~~v~~sp~g-~lasgs~D---------------- 261 (369)
+...... .+ ...++.++. +++.+..+
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 198 AYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTS
T ss_pred EcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCcccc
Confidence 4322000 01 134566666 66666655
Q ss_pred CcEEEEeCCCceeeeeccccc-c--------CceEEEEEc-CCCC---CEEEEEECCCeEEEEECcCCceeEEEE
Q 017601 262 RTVTIYDPRRWSALSRWVHCS-K--------YEITGLSFS-SIDS---NYIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 262 ~~v~vwD~~~~~~~~~~~~h~-~--------~~v~~l~~s-p~d~---~~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
.+|..+|.++++.+-.++... . .++. +... . +| ..++.++.++.+.++|.++++.+-.+.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 389999999998876554220 1 1122 2332 3 67 467778899999999999988776654
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.40 E-value=0.013 Score=59.65 Aligned_cols=241 Identities=12% Similarity=0.058 Sum_probs=119.3
Q ss_pred eeeEEEEe-ecCCCCceEEEEEecCCc----EEEEEecCC-CCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEE
Q 017601 94 EVQSIALA-ETDSSGYMVLGSVDSYGH----LIVSKLDTS-GKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVA 167 (369)
Q Consensus 94 ~V~~l~~s-~~~~~~~~~las~d~~g~----v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~ 167 (369)
.+...+|| ||+ ..+..+.+..|. |+++|+.++ .. +.. .+. ....+++|+|++..++.+.
T Consensus 175 ~~~~~~~S~PDG---~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~---~~~--------~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEH---DLVAFSVDMSGNEVYTIEFKRISDPSQT-IAD---KVS--------GTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTT---CEEEEEEESSSSSCEEEEEEETTCTTCC-CCC---CEE--------EECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCC---CEEEEEEeCCCCceEEEEEEECCCCCEe-CCc---ccc--------CceeeEEEecCCCEEEEEE
Confidence 67789999 985 344456665553 999998765 21 111 010 0123689999766555543
Q ss_pred eccc-----ceEEEEeCCcce---EEEEeeeCCcceeeeccCCCCCCCCcEEEEEc---CCeEEEEeCCcccCCce-eee
Q 017601 168 RSFS-----KSIDVYDQDIHL---RTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE---GCQLTIWDLRMKENGGC-LHR 235 (369)
Q Consensus 168 ~s~d-----~~i~lwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~---d~~v~iwD~~~~~~~~~-~~~ 235 (369)
.+ ..|.+++++... ..+............ .+++|+..|+..+. ...|.++|+.++.. .. +..
T Consensus 240 --~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~---~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~~~~~ 313 (751)
T 2xe4_A 240 --KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFM---YKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HNTLEI 313 (751)
T ss_dssp --ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEE---EECTTSSEEEEEEECSSCEEEEEEESSSCTT-CCCEEE
T ss_pred --ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEE---EECCCCCEEEEEecCCCCceEEEEECCCCCC-CceeEE
Confidence 33 357777765321 111111111111111 23466766666553 34688899886521 12 133
Q ss_pred eeccCCCcEEEEEECCCC-cEEEEeCC----CcEEEEeCCCceeeee-ccccccC--ceEEEEEcCCCCCEEEEEECCCe
Q 017601 236 ICGSVGDILYAVCSSSTG-NIAVAGAD----RTVTIYDPRRWSALSR-WVHCSKY--EITGLSFSSIDSNYIYVQGVDYE 307 (369)
Q Consensus 236 ~~~~~~~~v~~v~~sp~g-~lasgs~D----~~v~vwD~~~~~~~~~-~~~h~~~--~v~~l~~sp~d~~~l~s~s~D~~ 307 (369)
+........+++.|+..+ +++....+ ..|..+|+.+...... +..+ .. .+..+.+. .+.++++...|+.
T Consensus 314 l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~--~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 314 VRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVR--SNYLVVAGRRAGL 390 (751)
T ss_dssp SSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEEC--SSEEEEEEEETTE
T ss_pred eecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEE--CCEEEEEEEeCCE
Confidence 332213566777766555 44444443 3566677764322223 3334 33 34455543 2345566667775
Q ss_pred --EEEEEC-------cCCceeEEE--EcCCCeeeeeE----cCC-CCEEEEEeCC---CcEEEEECCCCc
Q 017601 308 --VFCGQW-------RESSKVFAF--RGDSNWLGFSK----CSN-RDVLGGWSDS---GSIFVADVVAKE 358 (369)
Q Consensus 308 --i~vwd~-------~~~~~~~~~--~g~~~~~~~~~----~~d-~~~l~sgs~d---g~I~iWd~~~~~ 358 (369)
+.++|+ ..++....+ .+.....++.. ..+ +.++++.+.. ..++.+|+.+++
T Consensus 391 ~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 391 TRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred EEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 555664 333312222 22211122211 123 3455555443 467777877664
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.39 E-value=0.097 Score=51.28 Aligned_cols=153 Identities=7% Similarity=-0.104 Sum_probs=87.0
Q ss_pred eEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEc------CCeEEEEeCCcccCCceee
Q 017601 163 MAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE------GCQLTIWDLRMKENGGCLH 234 (369)
Q Consensus 163 ~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~------d~~v~iwD~~~~~~~~~~~ 234 (369)
.+.++ +.|+.+..+|.. +.+.......+.... .+...|.- .++.++.++. ++.|..+|.+++ +.+-
T Consensus 117 ~v~v~-~~dg~l~alD~~tG~~~W~~~~~~~~~~~-~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG---~~~W 190 (571)
T 2ad6_A 117 QIVKK-QANGHLLALDAKTGKINWEVEVCDPKVGS-TLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTG---ELKW 190 (571)
T ss_dssp EEEEE-CTTSEEEEEETTTCCEEEEEECCCGGGTC-BCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTC---CEEE
T ss_pred EEEEE-eCCCEEEEEECCCCCEEEEecCCCCCccc-eeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCC---cEEE
Confidence 45555 678899999864 444433322111000 01111100 1346666554 789999999998 5554
Q ss_pred eeeccCC------------------------------------CcE-EEEEECCCC-cEEEEeCC---------------
Q 017601 235 RICGSVG------------------------------------DIL-YAVCSSSTG-NIAVAGAD--------------- 261 (369)
Q Consensus 235 ~~~~~~~------------------------------------~~v-~~v~~sp~g-~lasgs~D--------------- 261 (369)
++..... ..+ ..+++.++. .+..+..+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 4432100 000 135666765 66555532
Q ss_pred -CcEEEEeCCCceeeeeccc--cc-------cCceEEEEEcCCCCC---EEEEEECCCeEEEEECcCCceeEEEE
Q 017601 262 -RTVTIYDPRRWSALSRWVH--CS-------KYEITGLSFSSIDSN---YIYVQGVDYEVFCGQWRESSKVFAFR 323 (369)
Q Consensus 262 -~~v~vwD~~~~~~~~~~~~--h~-------~~~v~~l~~sp~d~~---~l~s~s~D~~i~vwd~~~~~~~~~~~ 323 (369)
++|..+|.++++.+-.++. |- ..++. +...+ +|+ .++.++.++.+.++|..+++.+-.+.
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 3699999999988765542 20 11221 23334 664 57778889999999999988776654
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.37 E-value=0.081 Score=48.28 Aligned_cols=201 Identities=8% Similarity=-0.053 Sum_probs=109.4
Q ss_pred eeeEEEEeecCCCCceEEEEEe-cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 94 EVQSIALAETDSSGYMVLGSVD-SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d-~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
....++|++.+ ..|.-.| ..+.|+.++.+.... ...+.... ..-.++++.+.+..++.+- ...+
T Consensus 74 ~~~~l~~d~~~----~~ly~~D~~~~~I~r~~~~g~~~-----~~~~~~~~-----~~p~glavd~~~g~ly~~d-~~~~ 138 (349)
T 3v64_C 74 NAIALDFHHRR----ELVFWSDVTLDRILRANLNGSNV-----EEVVSTGL-----ESPGGLAVDWVHDKLYWTD-SGTS 138 (349)
T ss_dssp CEEEEEEETTT----TEEEEEETTTTEEEEEETTSCSC-----EEEECSSC-----SCCCEEEEETTTTEEEEEE-TTTT
T ss_pred ceEEEEEeccc----cEEEEEeccCCceEEEecCCCCc-----eEEEeCCC-----CCccEEEEecCCCeEEEEc-CCCC
Confidence 46788998753 2444444 456777777654311 01111000 0113799988666665555 6678
Q ss_pred eEEEEeCCcceEEEEe---eeCCcceeeeccCCCCCCCCcEEEE-EcC-CeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 173 SIDVYDQDIHLRTLRT---LWYPSSLNFVQNLSPVNGGPNMLAV-TEG-CQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 173 ~i~lwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~lla~-s~d-~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
.|.+.+.+...+.... ...|..+..- |.++.|..+ ... +.|..+|+... ....+........+.+
T Consensus 139 ~I~~~~~dG~~~~~l~~~~l~~P~~iavd------p~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 139 RIEVANLDGAHRKVLLWQSLEKPRAIALH------PMEGTIYWTDWGNTPRIEASSMDGS----GRRIIADTHLFWPNGL 208 (349)
T ss_dssp EEEEEETTSCSCEEEECTTCSCEEEEEEE------TTTTEEEEEECSSSCEEEEEETTSC----SCEESCCSSCSCEEEE
T ss_pred eEEEEcCCCCceEEEEeCCCCCcceEEEe------cCcCeEEEeccCCCCEEEEEeCCCC----CcEEEEECCCCCcceE
Confidence 8999987643222211 1234444433 223343333 234 67888887643 2222211113567899
Q ss_pred EECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 248 CSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 248 ~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
+|+|++ .| .+-...+.|..+|+........+... .....++++ . .+.++.+-...+.|...|..+++....+
T Consensus 209 a~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav-~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-F-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-CCCceEEEE-E-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 999876 44 44456778999998643222222222 334577777 3 4556666666778888886555444443
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.33 E-value=0.012 Score=58.86 Aligned_cols=149 Identities=12% Similarity=0.174 Sum_probs=96.0
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECC---CCcEEEEeC------CCcEEEEeCCCceeeee
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSS---TGNIAVAGA------DRTVTIYDPRRWSALSR 277 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp---~g~lasgs~------D~~v~vwD~~~~~~~~~ 277 (369)
++.++.++.|+.|..+|.+++ +.+-++..........+..+| ++.++++.. ++.|..+|.++++.+-+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG---~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTG---KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTC---CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCC---CEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 457777888999999999998 555444331000001111111 455555543 58999999999988765
Q ss_pred ccc--ccc----------------------------CceEEEEEcCCCCCEEEEEECCC-------------------eE
Q 017601 278 WVH--CSK----------------------------YEITGLSFSSIDSNYIYVQGVDY-------------------EV 308 (369)
Q Consensus 278 ~~~--h~~----------------------------~~v~~l~~sp~d~~~l~s~s~D~-------------------~i 308 (369)
+.. ... .....+++.| +..+++.++.++ .|
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 531 000 0112468888 777888887665 49
Q ss_pred EEEECcCCceeEEEEc--CCCee-------eeeE-cCCCC---EEEEEeCCCcEEEEECCCCcc
Q 017601 309 FCGQWRESSKVFAFRG--DSNWL-------GFSK-CSNRD---VLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 309 ~vwd~~~~~~~~~~~g--~~~~~-------~~~~-~~d~~---~l~sgs~dg~I~iWd~~~~~~ 359 (369)
..+|.++++.+-.+.. |..|. .+.. ..+|+ .|+.++.+|.++++|.++|+.
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 9999999998877764 33221 0000 11554 689999999999999999874
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.32 E-value=0.04 Score=55.95 Aligned_cols=193 Identities=6% Similarity=-0.063 Sum_probs=99.8
Q ss_pred eEEEEC-CCCceeEEEEeccc----ceEEEEeCCcc-eEEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcC-----CeE
Q 017601 152 SGLCFS-PSQWSMAAVARSFS----KSIDVYDQDIH-LRTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEG-----CQL 219 (369)
Q Consensus 152 ~~l~~~-p~~~~~~a~~~s~d----~~i~lwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d-----~~v 219 (369)
.+.+|| |++. .+|.+.+.+ .+|.++|+... ..... .......+. ++||+..|+.+..| .+|
T Consensus 177 ~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~------WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 177 MEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIV------WGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCE------ECSSTTEEEEEEECTTCCEEEE
T ss_pred eeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEE------EecCCCEEEEEEECCCCCCCEE
Confidence 468999 9654 555442333 35999997543 21000 000111222 34567788877765 368
Q ss_pred EEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe---CCCcEEEEeCCCce-ee--eeccccccCceEEEEEc
Q 017601 220 TIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG---ADRTVTIYDPRRWS-AL--SRWVHCSKYEITGLSFS 292 (369)
Q Consensus 220 ~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs---~D~~v~vwD~~~~~-~~--~~~~~h~~~~v~~l~~s 292 (369)
.++++.++.. .....+..........+.||||| +|+..+ ....|.++|+.++. .. ..+.........++.|+
T Consensus 250 ~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 250 WRHVMGKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEEETTSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred EEEECCCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence 8888877521 11222222212445678999999 665544 23457888988752 22 33333214555666665
Q ss_pred CCCCCEEEEEECC----CeEEEEECcCC-ceeE-EEEcCCCeeeeeE--cCCCCEEEEEeCCCcEE--EEEC
Q 017601 293 SIDSNYIYVQGVD----YEVFCGQWRES-SKVF-AFRGDSNWLGFSK--CSNRDVLGGWSDSGSIF--VADV 354 (369)
Q Consensus 293 p~d~~~l~s~s~D----~~i~vwd~~~~-~~~~-~~~g~~~~~~~~~--~~d~~~l~sgs~dg~I~--iWd~ 354 (369)
. .+.+++....+ ..|..+|+.++ +... .+..... ..+.. ...+.++++...++..+ ++++
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~-~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED-VFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS-EEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC-cEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 4 44444444443 36777777642 2222 2222211 12221 22455677888888655 4554
No 269
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.30 E-value=0.1 Score=53.24 Aligned_cols=194 Identities=8% Similarity=-0.084 Sum_probs=110.4
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCcc------eEEEE-eeeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEE
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH------LRTLR-TLWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIW 222 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~------~~~~~-~~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iw 222 (369)
..+++|++.+..++.+- ...+.|..++++.. ...+. .+..+..+++-. .++ .+++-...+.|.+.
T Consensus 426 ~~gl~~d~~~~~lY~sD-~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~------~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW------IHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp EEEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCCCEEEEET------TTTEEEEEETTTTEEEEE
T ss_pred eEEEeecccCCeeEEee-ccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee------cCCcEEEEecCCCeEEEE
Confidence 45799998655555554 66788888877531 11111 122344444432 132 33344457889999
Q ss_pred eCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC--CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEE
Q 017601 223 DLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA--DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYI 299 (369)
Q Consensus 223 D~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~--D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l 299 (369)
|+... ....+..........|++.|.+ .|+.... .+.|.+.++........+... -.....|++.+ ....|
T Consensus 499 ~ldG~----~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~-l~~P~GLavD~-~~~~L 572 (791)
T 3m0c_C 499 DTKGV----KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDL-LSGRL 572 (791)
T ss_dssp ETTSS----SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS-CSCEEEEEEET-TTTEE
T ss_pred eCCCC----eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC-CCCceEEEEec-CCCeE
Confidence 98754 2223322113568899999975 5544432 367888888643332223333 35688999998 55555
Q ss_pred EEE-ECCCeEEEEECcCCceeEEEEcCCCe---eeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 300 YVQ-GVDYEVFCGQWRESSKVFAFRGDSNW---LGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 300 ~s~-s~D~~i~vwd~~~~~~~~~~~g~~~~---~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+.+ .....|...|+..........+...+ .++.. ..+.++++=...+.|+..|..+++
T Consensus 573 YwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav-~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 573 YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE-eCCEEEEEECCCCEEEEEeCCCCc
Confidence 544 45568999998765444444432111 23332 234455555667888888876664
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.13 E-value=0.14 Score=46.12 Aligned_cols=194 Identities=10% Similarity=-0.024 Sum_probs=110.0
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCcc---eEEEE-eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcc
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDIH---LRTLR-TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMK 227 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~---~~~~~-~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~ 227 (369)
.+++|++.++.++.+- ...+.|..++.+.. ...+. ....+..+.+-. ..+..+++-...+.|.++|+...
T Consensus 38 ~~ld~d~~~~~lyw~D-~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~-----~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW-----LGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEGGGTEEEEEE-TTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET-----TTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEEeCCCEEEEEE-CCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc-----CCCeEEEEECCCCEEEEEECCCC
Confidence 3688988555555544 67788988886532 11111 122444444432 11223344445678999998654
Q ss_pred cCCceeeeeeccCCCcEEEEEECCCC-cEEEEe--CCCcEEEEeCCCceeeeec-cccccCceEEEEEcCCCCCEEEEE-
Q 017601 228 ENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG--ADRTVTIYDPRRWSALSRW-VHCSKYEITGLSFSSIDSNYIYVQ- 302 (369)
Q Consensus 228 ~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs--~D~~v~vwD~~~~~~~~~~-~~h~~~~v~~l~~sp~d~~~l~s~- 302 (369)
.....+... ......+++.|.+ .|+... ..+.|...++.. .....+ ... -..-+.|+|+| ++..|+-+
T Consensus 112 ---~~~~l~~~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~-l~~Pnglavd~-~~~~lY~aD 184 (318)
T 3sov_A 112 ---LRKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSE-IYWPNGLTLDY-EEQKLYWAD 184 (318)
T ss_dssp ---SCEEEECSS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSS-CSCEEEEEEET-TTTEEEEEE
T ss_pred ---cEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECC-CCCccEEEEec-cCCEEEEEE
Confidence 211112222 3667899999875 554444 357888888753 222222 222 24568999999 66665554
Q ss_pred ECCCeEEEEECcCCceeEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 303 GVDYEVFCGQWRESSKVFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+..+.|..+|+..........+. ..-.++... .+.++.+-...+.|..++..+++.
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence 45678999998753332222211 111333332 345556666778899999877753
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=0.18 Score=47.40 Aligned_cols=151 Identities=9% Similarity=-0.006 Sum_probs=80.4
Q ss_pred eeEEEEee-cCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc--
Q 017601 95 VQSIALAE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS-- 171 (369)
Q Consensus 95 V~~l~~s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d-- 171 (369)
-..|+++| ++ ..|..+|..+.|+.+|..... + ..+.. ....-.+++|++++..++++. ...
T Consensus 139 P~~lavdp~~~----g~Lyv~d~~~~I~~id~~~~~--v----~~~~~-----~~~~P~~ia~d~~G~~lyvad-~~~~~ 202 (430)
T 3tc9_A 139 AVWLSFDPKNH----NHLYLVGEQHPTRLIDFEKEY--V----STVYS-----GLSKVRTICWTHEADSMIITN-DQNNN 202 (430)
T ss_dssp CCEEEEETTEE----EEEEEEEBTEEEEEEETTTTE--E----EEEEC-----CCSCEEEEEECTTSSEEEEEE-CCSCT
T ss_pred CCEEEECCCCC----CeEEEEeCCCcEEEEECCCCE--E----EEEec-----CCCCcceEEEeCCCCEEEEEe-CCCCc
Confidence 36778876 32 345555555667776665321 1 01111 011235799999665455544 322
Q ss_pred --ceEEEEeCCc-c--eEEEEeeeCCcceeeeccCCCCCCCCcEEE-EEcCCeEEEEeCCcccCCceeeeeeccCCCcEE
Q 017601 172 --KSIDVYDQDI-H--LRTLRTLWYPSSLNFVQNLSPVNGGPNMLA-VTEGCQLTIWDLRMKENGGCLHRICGSVGDILY 245 (369)
Q Consensus 172 --~~i~lwd~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~~~~lla-~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~ 245 (369)
..+..++... . .+.+....++..+.+. ++++.|.. -..++.|..+|..++ ..............+
T Consensus 203 ~~~~v~~~~~~g~~~~~~~l~~~~~p~giavd------p~~g~lyv~d~~~~~V~~~~~~~~---~~~~~~~~~~~~~P~ 273 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVITELTKGQNCNGAETH------PINGELYFNSWNAGQVFRYDFTTQ---ETTPLFTIQDSGWEF 273 (430)
T ss_dssp TSEEEEEEEGGGTSCSEEEEEECSSCCCEEEC------TTTCCEEEEETTTTEEEEEETTTT---EEEEEEECSSSSCCE
T ss_pred ccceEEEEeCCCceeeeeeeccCCCceEEEEe------CCCCEEEEEECCCCEEEEEECCCC---cEEEEEEcCCCCcce
Confidence 2344444322 1 1233334455555543 32344444 445789999998765 221222221124567
Q ss_pred EEEECCCC-cEEE-EeCCCcEEEEeCC
Q 017601 246 AVCSSSTG-NIAV-AGADRTVTIYDPR 270 (369)
Q Consensus 246 ~v~~sp~g-~las-gs~D~~v~vwD~~ 270 (369)
.++|+|+| +|.. -...+.|..+|..
T Consensus 274 gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 274 HIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 89999999 4544 4567889988754
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.12 E-value=0.012 Score=57.92 Aligned_cols=137 Identities=9% Similarity=-0.016 Sum_probs=86.5
Q ss_pred CeEEEEeCCcccCCceeeeeec--cC-------CCcEEEEEEC-CCC----cEEEEeCCCcEEEEeCCCceeeeeccccc
Q 017601 217 CQLTIWDLRMKENGGCLHRICG--SV-------GDILYAVCSS-STG----NIAVAGADRTVTIYDPRRWSALSRWVHCS 282 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~--~~-------~~~v~~v~~s-p~g----~lasgs~D~~v~vwD~~~~~~~~~~~~h~ 282 (369)
+.|.-+|.+++ +.+-.++. +. ..++. +... .+| .++.++.+|.+.++|.++++.+..+...
T Consensus 291 ~~v~AlD~~TG---~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~- 365 (582)
T 1flg_A 291 SGQVGVDPSSG---EVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV- 365 (582)
T ss_dssp SEEEEECTTTC---CEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS-
T ss_pred ceEEEEeCCCC---CEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc-
Confidence 58999999998 55544432 10 11222 2222 455 5778999999999999998887544322
Q ss_pred c-------------Cc--------------------------------eEEEEEcCCCCCEEEEEE--------------
Q 017601 283 K-------------YE--------------------------------ITGLSFSSIDSNYIYVQG-------------- 303 (369)
Q Consensus 283 ~-------------~~--------------------------------v~~l~~sp~d~~~l~s~s-------------- 303 (369)
. .+ -..++++| +..+++...
T Consensus 366 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~ 444 (582)
T 1flg_A 366 DNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ-DTGLFYVPANHWKEDYWTEEVSY 444 (582)
T ss_dssp SCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT-TTCCEEEEEECEEEEEEECCCCC
T ss_pred cCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC-CCCEEEEechhcceeeecccccc
Confidence 1 00 01356677 444444332
Q ss_pred -------------------CCCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 304 -------------------VDYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 304 -------------------~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
.++.|..||+.+++.+-.+.......+-.....+.+++.|+.||.++.||.++|+.
T Consensus 445 ~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 445 TKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp CTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 36789999999998876664332111111112467888899999999999999974
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.02 E-value=0.17 Score=45.30 Aligned_cols=205 Identities=10% Similarity=-0.034 Sum_probs=110.2
Q ss_pred ceeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....++|++++ ..|.-.|. .+.|+.++.+...... .....+.... ..-.++++.+.+..++.+- ...
T Consensus 30 ~~p~g~~~d~~~----~~ly~~D~~~~~I~~~~~~g~~~~~-~~~~~~~~~~-----~~p~glavd~~~~~ly~~d-~~~ 98 (316)
T 1ijq_A 30 RNVVALDTEVAS----NRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDI-----QAPDGLAVDWIHSNIYWTD-SVL 98 (316)
T ss_dssp SSEEEEEEETTT----TEEEEEETTTTEEEEEEC---------CEEEECSSC-----SCCCEEEEETTTTEEEEEE-TTT
T ss_pred CceEEEEEEeCC----CEEEEEECCCCcEEEEECCCCCCCc-ccEEEEeCCC-----CCcCEEEEeecCCeEEEEE-CCC
Confidence 446788998753 24444444 4678888776410000 0001111000 0113789987566555554 677
Q ss_pred ceEEEEeCCcc-eEEEEe--eeCCcceeeeccCCCCCCCCcEEEEEc-C-CeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIH-LRTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVTE-G-CQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s~-d-~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.++|.+.. .+.+.. ...|..+..- |.++.|..+.. . +.|...++... ....+........+.
T Consensus 99 ~~I~~~~~~g~~~~~~~~~~~~~P~~iavd------p~~g~ly~~d~~~~~~I~~~~~dG~----~~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 99 GTVSVADTKGVKRKTLFRENGSKPRAIVVD------PVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNG 168 (316)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEEEEEEE------TTTTEEEEEECSSSCEEEEEETTSC----CEEEEECSSCSCEEE
T ss_pred CEEEEEeCCCCceEEEEECCCCCcceEEeC------CCCCEEEEEccCCCCeEEEEcCCCC----CeEEEEECCCCCceE
Confidence 89999987633 222221 1234444432 33444444333 2 67888887533 222222111356789
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeecc---ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEE
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWV---HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFA 321 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~---~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~ 321 (369)
++++|++ .| .+-+..+.|..+|+.. .....+. .. .....++++. .+.++++-...+.|..+|..+++.+..
T Consensus 169 la~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~-~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 169 ITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKR-LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTT-TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred EEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCc-cCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEE
Confidence 9999877 44 4445677999999864 2222221 12 2335677774 455566666677999999876655555
Q ss_pred E
Q 017601 322 F 322 (369)
Q Consensus 322 ~ 322 (369)
+
T Consensus 245 i 245 (316)
T 1ijq_A 245 L 245 (316)
T ss_dssp E
T ss_pred E
Confidence 4
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.90 E-value=0.21 Score=44.36 Aligned_cols=96 Identities=16% Similarity=0.070 Sum_probs=57.9
Q ss_pred CCCCcEEE-EEcCCeEEEEeCCc-ccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCcee--eeecc
Q 017601 205 NGGPNMLA-VTEGCQLTIWDLRM-KENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSA--LSRWV 279 (369)
Q Consensus 205 ~~~~~lla-~s~d~~v~iwD~~~-~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~--~~~~~ 279 (369)
++++.|.. -...+.|..||+.. +. ......+... .....++++++| ++++....+.|.++|.. ++. +..+.
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~-~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDK-PGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSC-BCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCC-CCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 34444443 34578999999874 21 1112222211 234568899999 55555567889999975 554 22333
Q ss_pred ccccCceEEEEEc---CCCCCEEEEEECCC
Q 017601 280 HCSKYEITGLSFS---SIDSNYIYVQGVDY 306 (369)
Q Consensus 280 ~h~~~~v~~l~~s---p~d~~~l~s~s~D~ 306 (369)
.. ....++++|. | +++.|+.+...+
T Consensus 252 ~~-~~~p~~~a~~g~~~-d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 QG-VIGSTAVAFGQTEG-DCTAIYVVTNGG 279 (306)
T ss_dssp GT-CTTEEEEEECCSTT-TTTEEEEEECTT
T ss_pred cc-cCCceEEEEecccC-CCCEEEEECCCC
Confidence 33 3568999998 8 877776665443
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.88 E-value=0.074 Score=48.44 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=91.2
Q ss_pred CCCCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECC----CC-c--EEEEe--C--CCcEEEEeC--CC
Q 017601 205 NGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSS----TG-N--IAVAG--A--DRTVTIYDP--RR 271 (369)
Q Consensus 205 ~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp----~g-~--lasgs--~--D~~v~vwD~--~~ 271 (369)
|....+++....+.+.+||+ ++ +.++.+.. +.++.+..-| .| . ++.++ . +++|.+|++ .+
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G---~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DG---KMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TS---CEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CCccEEEEEcCCCCEEEEcC-CC---cEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 43456777777889999999 66 67777642 4566666554 23 1 33333 3 579999966 33
Q ss_pred ceeeeecc------cccc-CceEEEEE--cCCCCC-EEEEEECCCeEEEEECc-------CCceeEEEEcCCCeeeeeEc
Q 017601 272 WSALSRWV------HCSK-YEITGLSF--SSIDSN-YIYVQGVDYEVFCGQWR-------ESSKVFAFRGDSNWLGFSKC 334 (369)
Q Consensus 272 ~~~~~~~~------~h~~-~~v~~l~~--sp~d~~-~l~s~s~D~~i~vwd~~-------~~~~~~~~~g~~~~~~~~~~ 334 (369)
++ +..+. +. . ..+..+++ +|..+. +++....++.+..|++. +.+.++.|.-.+...++..-
T Consensus 111 ~~-l~~i~~~~~pv~t-~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvD 188 (355)
T 3amr_A 111 GT-LQSMTDPDHPIAT-AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAAD 188 (355)
T ss_dssp CC-EEECSCTTSCEEC-CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEE
T ss_pred Cc-eeeccccccCcCC-CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEc
Confidence 33 44331 12 2 56777888 774454 67778889999999983 24667777654422333333
Q ss_pred CCCCEEEEEeCCCcEEEEECC
Q 017601 335 SNRDVLGGWSDSGSIFVADVV 355 (369)
Q Consensus 335 ~d~~~l~sgs~dg~I~iWd~~ 355 (369)
+....|+.+-++.-|..++.+
T Consensus 189 d~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 189 DEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp TTTTEEEEEETTTEEEEEECS
T ss_pred CCCCeEEEecccceEEEEeCC
Confidence 456789999999776666654
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.88 E-value=0.007 Score=61.02 Aligned_cols=191 Identities=8% Similarity=-0.047 Sum_probs=103.4
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCc-----ceEEEE--eeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCC
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDI-----HLRTLR--TLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLR 225 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-----~~~~~~--~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~ 225 (369)
+++|++.+..++.+- ...+.|..++... ....+. ....+..+++-. ..+..+++-...+.|.++|+.
T Consensus 410 gla~d~~~~~Ly~sD-~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~-----~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 410 ALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW-----IHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CCEEETTTTEEEECC-TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC-----SSSBCEECCTTTSCEEEEBSS
T ss_pred EEccccccCeEEEEe-cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe-----eCCcEEEEeccCCeEEEEecC
Confidence 689988555444443 5677888887653 111110 111233333211 112334443456789999987
Q ss_pred cccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC--CCcEEEEeCCCceeeeec-cccccCceEEEEEcCCCCCEEEE
Q 017601 226 MKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA--DRTVTIYDPRRWSALSRW-VHCSKYEITGLSFSSIDSNYIYV 301 (369)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~--D~~v~vwD~~~~~~~~~~-~~h~~~~v~~l~~sp~d~~~l~s 301 (369)
.. . +..+..........|+++|.+ +|+.... .+.|.++++... ....+ ... -...+.|+|+|..+.++++
T Consensus 484 g~---~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~-l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 484 GV---K-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN-IQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp SC---C-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSS-CSSCCCEEECTTTCCEEEE
T ss_pred CC---c-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCC-CCCccEEEEeccCCEEEEE
Confidence 54 2 222221112456788999976 4444332 267888776532 22222 222 2346789999933555555
Q ss_pred EECCCeEEEEECcCCceeEEEEc-----CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 302 QGVDYEVFCGQWRESSKVFAFRG-----DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 302 ~s~D~~i~vwd~~~~~~~~~~~g-----~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
-+..+.|..+|+........+.. |. .++... .+.++++-...+.|..++..+++
T Consensus 558 D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P--~glavd-~~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 558 DSKLHSISSIDVNGGNRKTILEDEKRLAHP--FSLAVF-EDKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp ETTTTEEEEECSSSSCCEEECCCSSSCSSC--CCCEEE-TTEEEEECSTTTCEEEEETTTEE
T ss_pred ecCCCeEEEEccCCCceEEEEecCCcCCCc--eEeEEE-CCEEEEEeCCCCeEEEEEccCCC
Confidence 56677999999875332222221 22 223222 23455566677899999987665
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.84 E-value=0.33 Score=45.72 Aligned_cols=202 Identities=10% Similarity=0.008 Sum_probs=101.7
Q ss_pred eeEEEEeec-CCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc--
Q 017601 95 VQSIALAET-DSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS-- 171 (369)
Q Consensus 95 V~~l~~s~~-~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d-- 171 (369)
-..|+|+|+ . ...|..+|..+.|+.++...+. + ..+.. ....-.+++|++++. ++++. ...
T Consensus 141 P~gvavd~~s~---~g~Lyv~D~~~~I~~id~~~g~--v----~~~~~-----~~~~P~giavd~dG~-lyVad-~~~~~ 204 (433)
T 4hw6_A 141 IWRMMFDPNSN---YDDLYWVGQRDAFRHVDFVNQY--V----DIKTT-----NIGQCADVNFTLNGD-MVVVD-DQSSD 204 (433)
T ss_dssp CCEEEECTTTT---TCEEEEECBTSCEEEEETTTTE--E----EEECC-----CCSCEEEEEECTTCC-EEEEE-CCSCT
T ss_pred CceEEEccccC---CCEEEEEeCCCCEEEEECCCCE--E----EEeec-----CCCCccEEEECCCCC-EEEEc-CCCCc
Confidence 457777763 1 1234444444677777664321 0 11111 001134799999665 55444 211
Q ss_pred --ceEEEEeCCc-ce--EEEEeeeCCcceeeeccCCCCCCCCcEE-EEEcCCeEEEEeCCcccCCceeeee-eccCCCcE
Q 017601 172 --KSIDVYDQDI-HL--RTLRTLWYPSSLNFVQNLSPVNGGPNML-AVTEGCQLTIWDLRMKENGGCLHRI-CGSVGDIL 244 (369)
Q Consensus 172 --~~i~lwd~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~~~ll-a~s~d~~v~iwD~~~~~~~~~~~~~-~~~~~~~v 244 (369)
..+..++... .. ..+.....|..+.+. ++++.|. +-..++.|..+|..++ .....+ .......-
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd------~~~G~lyv~d~~~~~V~~~d~~~g---~~~~~~~~~~~~~~~ 275 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLCNARGAKTCAVH------PQNGKIYYTRYHHAMISSYDPATG---TLTEEEVMMDTKGSN 275 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEEECSSBCCCEEC------TTTCCEEECBTTCSEEEEECTTTC---CEEEEEEECSCCSSC
T ss_pred ccceEEEEECCCCeeccccccccCCCCEEEEe------CCCCeEEEEECCCCEEEEEECCCC---eEEEEEeccCCCCCc
Confidence 1233333221 11 122223344444432 3233444 4445788999998766 331222 21101334
Q ss_pred EEEEECCCC-cEEEE-eCCCcEEEEeCC--Ccee--eeecccc--------------ccCceEEEEE---------cCCC
Q 017601 245 YAVCSSSTG-NIAVA-GADRTVTIYDPR--RWSA--LSRWVHC--------------SKYEITGLSF---------SSID 295 (369)
Q Consensus 245 ~~v~~sp~g-~lasg-s~D~~v~vwD~~--~~~~--~~~~~~h--------------~~~~v~~l~~---------sp~d 295 (369)
+.++|+|+| .|..+ ...+.|..+|.. ++.. ...+.+. .-.....+++ .+ +
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~ 354 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-E 354 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-C
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-C
Confidence 579999999 45544 457889998764 2221 1111110 0123567898 66 7
Q ss_pred CCEEEEEECCCeEEEEECcCCceeEEEEc
Q 017601 296 SNYIYVQGVDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 296 ~~~l~s~s~D~~i~vwd~~~~~~~~~~~g 324 (369)
+.++++-...+.|+.++. .+ .+.++-|
T Consensus 355 g~lyvaD~~n~~I~~~~~-~G-~v~t~~G 381 (433)
T 4hw6_A 355 YDFYFCDRDSHTVRVLTP-EG-RVTTYAG 381 (433)
T ss_dssp EEEEEEETTTTEEEEECT-TS-EEEEEEC
T ss_pred CcEEEEECCCCEEEEECC-CC-CEEEEEe
Confidence 777777666778999985 44 3444433
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.77 E-value=0.16 Score=45.74 Aligned_cols=153 Identities=10% Similarity=0.095 Sum_probs=95.7
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCC-cceEEEEeeeC----------CcceeeeccCCCCCCCCcEEEEEc------
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQD-IHLRTLRTLWY----------PSSLNFVQNLSPVNGGPNMLAVTE------ 215 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~-~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~lla~s~------ 215 (369)
+++|++.+.. +.++.-+.++|..||.. .....+ .... +..+.+.. .+++ ++|+++.+
T Consensus 17 ~~~wd~~~g~-~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~---~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 17 DTIYDRTRQV-FYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLT---HDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp CEEEETTTTE-EEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESS---SSSC-CEEEEEEEETTTTC
T ss_pred CccCcCCCCE-EEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEec---cCCC-CcEEEEEccccccc
Confidence 5899885554 44443689999999986 333222 2211 12222220 0244 56666544
Q ss_pred --------CCeEEEEeCC---cccCCceeeeeecc------------CCCcEEEEEECCCC-cEEEEeCC-CcEEEEeCC
Q 017601 216 --------GCQLTIWDLR---MKENGGCLHRICGS------------VGDILYAVCSSSTG-NIAVAGAD-RTVTIYDPR 270 (369)
Q Consensus 216 --------d~~v~iwD~~---~~~~~~~~~~~~~~------------~~~~v~~v~~sp~g-~lasgs~D-~~v~vwD~~ 270 (369)
+..|..||+. ++ +.+...... .....+.++..++| ..++++.- +.|...|..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg---~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENS---KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTC---CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred ccccccCCCCEEEEEcCCcCCCC---CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 5789999998 66 444333210 01247899999999 77777777 777777765
Q ss_pred Cceeeeecc-----ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC
Q 017601 271 RWSALSRWV-----HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES 316 (369)
Q Consensus 271 ~~~~~~~~~-----~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~ 316 (369)
. +.+..+. .......+.++++| +++.|+....++.+.-+|++..
T Consensus 168 G-~~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 168 G-KTVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp S-CCEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSS
T ss_pred C-CEEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCC
Confidence 3 2333221 11023467999999 9999888877999999998853
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.70 E-value=0.26 Score=42.76 Aligned_cols=203 Identities=7% Similarity=0.040 Sum_probs=113.4
Q ss_pred CccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec
Q 017601 90 PHRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS 169 (369)
Q Consensus 90 ~H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s 169 (369)
+-.+++..|+|+|++ ..+.+..+..+.|+..|.+ + . +.. ...+... ...-++++.+.+ .++++. -
T Consensus 24 g~~~~lSGla~~~~~---~~L~aV~d~~~~I~~ld~~-g-~-v~~-~i~l~g~------~D~EGIa~~~~g-~~~vs~-E 88 (255)
T 3qqz_A 24 GITNNISSLTWSAQS---NTLFSTINKPAAIVEMTTN-G-D-LIR-TIPLDFV------KDLETIEYIGDN-QFVISD-E 88 (255)
T ss_dssp TCCSCEEEEEEETTT---TEEEEEEETTEEEEEEETT-C-C-EEE-EEECSSC------SSEEEEEECSTT-EEEEEE-T
T ss_pred CcccCcceeEEeCCC---CEEEEEECCCCeEEEEeCC-C-C-EEE-EEecCCC------CChHHeEEeCCC-EEEEEE-C
Confidence 334679999999873 3566667888888887765 2 1 111 1111111 124478888743 444444 5
Q ss_pred ccceEEEEeCCc--ceEEEEeee-----CC--cceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeeec--
Q 017601 170 FSKSIDVYDQDI--HLRTLRTLW-----YP--SSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRICG-- 238 (369)
Q Consensus 170 ~d~~i~lwd~~~--~~~~~~~~~-----~~--~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~-- 238 (369)
.+..+.+++++. .+....... .+ ..+.-+. ++++++.|.++.+.....||.++.-.....+..+..
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA---~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLA---YSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEE---EETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEE---EeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 567888887542 112222111 11 1111222 234566788777755555555541111112222211
Q ss_pred ---c-CCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCceeeeec--c-ccc-----cCceEEEEEcCCCCCEEEEEEC
Q 017601 239 ---S-VGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSALSRW--V-HCS-----KYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 239 ---~-~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~~~~~--~-~h~-----~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
. ....+.+++|+|.. +++.....+.+.++|.. ++.+..+ . +.. -..--.|+|.+ +|++.++ |.
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIv-sE 242 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIV-SE 242 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEE-ET
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEE-cC
Confidence 0 02457899999987 66777788889999965 5555433 3 210 13568999999 9985555 78
Q ss_pred CCeEEEEEC
Q 017601 305 DYEVFCGQW 313 (369)
Q Consensus 305 D~~i~vwd~ 313 (369)
.+.++.+.-
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 787776653
No 280
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.63 E-value=0.73 Score=46.80 Aligned_cols=189 Identities=11% Similarity=0.029 Sum_probs=109.1
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEeee-------CCcceeeeccCCCCCCCCc-EEEEEcCCeEE
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTLW-------YPSSLNFVQNLSPVNGGPN-MLAVTEGCQLT 220 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~-lla~s~d~~v~ 220 (369)
.+.++...+++ . +-++ ..++-+..||... ....+.... ....+..+. .++ ++. |..++.++-|.
T Consensus 358 ~V~~i~~d~~g-~-lWiG-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~---~d~-~g~~lWigt~~~Gl~ 430 (795)
T 4a2l_A 358 VVSCIVEDKDK-N-LWIG-TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY---VDE-KKSLVYIGTHAGGLS 430 (795)
T ss_dssp SEEEEEECTTS-C-EEEE-ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE---EET-TTTEEEEEETTTEEE
T ss_pred eeEEEEECCCC-C-EEEE-ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE---EcC-CCCEEEEEeCcCcee
Confidence 46677777643 3 3444 4666788998753 233222110 011222221 112 345 77777778899
Q ss_pred EEeCCcccCCceeeeeec----cCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeecc-----c-cccCceEEEE
Q 017601 221 IWDLRMKENGGCLHRICG----SVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWV-----H-CSKYEITGLS 290 (369)
Q Consensus 221 iwD~~~~~~~~~~~~~~~----~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~-----~-h~~~~v~~l~ 290 (369)
+||.+++ + +..+.. -....|+++...++|.|-.|+. +-+.+||..+++...... . . ...|.++.
T Consensus 431 ~~d~~~~---~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~ 504 (795)
T 4a2l_A 431 ILHRNSG---Q-VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVV-SKQITTLF 504 (795)
T ss_dssp EEETTTC---C-EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCC-CCCEEEEE
T ss_pred EEeCCCC---c-EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccC-CceEEEEE
Confidence 9998876 3 233321 0036799999998885555555 458889988765433211 1 2 35789999
Q ss_pred EcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc-------CC-CeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 291 FSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG-------DS-NWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 291 ~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g-------~~-~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
..+ ++.+.+... +.+..||..+++. .+.. .. ....+....+|.+.++.. . -|..||.++++
T Consensus 505 ~d~-~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 505 RDS-HKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQ 573 (795)
T ss_dssp ECT-TCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTE
T ss_pred ECC-CCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCc
Confidence 998 888766554 5688899877655 3321 11 112233334677665543 3 57888877654
No 281
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.62 E-value=0.73 Score=46.77 Aligned_cols=192 Identities=9% Similarity=0.084 Sum_probs=112.4
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCcc-eEEEEeee------CCcceeeeccCCCCCCCCcEEEEEcCCeEEEE
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIH-LRTLRTLW------YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIW 222 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~-~~~~~~~~------~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iw 222 (369)
.+.++...+++ .+ -++ ..+ -|.+||.... ...+.... ....+..+. .++ .+.+-.++.++-|..|
T Consensus 264 ~i~~i~~d~~g-~l-Wig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~---~D~-~g~lWigt~~~Gl~~~ 335 (795)
T 4a2l_A 264 YIRSLAMDSQN-RL-WIG-TFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF---MDS-QGGMWLGTYFGGLNYY 335 (795)
T ss_dssp BEEEEEECTTS-CE-EEE-ESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE---ECT-TSCEEEEESSSCEEEE
T ss_pred eEEEEEEcCCC-CE-EEE-eCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE---EeC-CcCEEEEECCCCeEEe
Confidence 46678777743 33 334 234 5888886533 22221110 011222222 123 3567777777889999
Q ss_pred eCCcccCCceeeeeecc------CCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeecc--------ccccCceEE
Q 017601 223 DLRMKENGGCLHRICGS------VGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWV--------HCSKYEITG 288 (369)
Q Consensus 223 D~~~~~~~~~~~~~~~~------~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~--------~h~~~~v~~ 288 (369)
|..+. . ...+... ....|.+++..++|.|-.|..++-|..||..+++...-.. -. ...|.+
T Consensus 336 ~~~~~---~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~ 410 (795)
T 4a2l_A 336 HPIRN---R-FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIG-SNNIKA 410 (795)
T ss_dssp CGGGG---S-SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCS-CSCEEE
T ss_pred CCCcc---c-ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCC-CccEEE
Confidence 87654 2 2222210 0356999999998866678888789999987754332211 11 356899
Q ss_pred EEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc------CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 289 LSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG------DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g------~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
+...+ +++.|..|..++-+.++|.++++... +.. ......+....+|.+.++. . +-|.+||.++++
T Consensus 411 i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 411 VYVDE-KKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS 482 (795)
T ss_dssp EEEET-TTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred EEEcC-CCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence 99888 88856667787889999988765433 321 1111233333466665554 4 458889987654
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.58 E-value=0.073 Score=50.17 Aligned_cols=149 Identities=12% Similarity=0.069 Sum_probs=83.7
Q ss_pred EEEECCC-CceeEEEEecccceEEEEeCCc-ceEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEc-CC----eEEEEeC
Q 017601 153 GLCFSPS-QWSMAAVARSFSKSIDVYDQDI-HLRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTE-GC----QLTIWDL 224 (369)
Q Consensus 153 ~l~~~p~-~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~-d~----~v~iwD~ 224 (369)
+++++|. +..++++- .. +.|..+|... .+..+.. ...|..+.+. +++..|+.+.. ++ .+..++
T Consensus 141 ~lavdp~~~g~Lyv~d-~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d------~~G~~lyvad~~~~~~~~~v~~~~- 211 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVG-EQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWT------HEADSMIITNDQNNNDRPNNYILT- 211 (430)
T ss_dssp EEEEETTEEEEEEEEE-BT-EEEEEEETTTTEEEEEECCCSCEEEEEEC------TTSSEEEEEECCSCTTSEEEEEEE-
T ss_pred EEEECCCCCCeEEEEe-CC-CcEEEEECCCCEEEEEecCCCCcceEEEe------CCCCEEEEEeCCCCcccceEEEEe-
Confidence 6999983 45444443 33 7899999764 3333322 1233344433 34554444432 22 233344
Q ss_pred CcccCCceeeeeeccCCCcEEEEEECC-CC-cEEEEeCCCcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCCEE-E
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCSSS-TG-NIAVAGADRTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSNYI-Y 300 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g-~lasgs~D~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~~l-~ 300 (369)
+.+.- .....+... .....++++| +| ++++-..++.|..+|...+....... +. ...-..++|+| ++++| +
T Consensus 212 ~~g~~-~~~~~l~~~--~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~p-dG~~lyv 286 (430)
T 3tc9_A 212 RESGF-KVITELTKG--QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHP-SGNYAYI 286 (430)
T ss_dssp GGGTS-CSEEEEEEC--SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECT-TSSEEEE
T ss_pred CCCce-eeeeeeccC--CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcC-CCCEEEE
Confidence 33311 111222222 4457789999 66 55555567889999988765422211 11 23467899999 99954 4
Q ss_pred EEECCCeEEEEECcC
Q 017601 301 VQGVDYEVFCGQWRE 315 (369)
Q Consensus 301 s~s~D~~i~vwd~~~ 315 (369)
+-...+.|..+|...
T Consensus 287 ~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 287 VVVNQHYILRSDYDW 301 (430)
T ss_dssp EETTTTEEEEEEEET
T ss_pred EECCCCEEEEEeCCc
Confidence 555678999988764
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.57 E-value=0.48 Score=44.00 Aligned_cols=206 Identities=9% Similarity=-0.046 Sum_probs=109.6
Q ss_pred ceeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
..+..|+|++.+ ..|.-.|. .+.|+.++++...... .....+.. .-..-.++++.+.+..++.+- ...
T Consensus 112 ~~~~~l~~d~~~----~~lywsD~~~~~I~~~~~~g~~~~~-~~~~~~~~-----~~~~p~glavD~~~~~lY~~d-~~~ 180 (400)
T 3p5b_L 112 RNVVALDTEVAS----NRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISR-----DIQAPDGLAVDWIHSNIYWTD-SVL 180 (400)
T ss_dssp SCEEEEEEETTT----TEEEEEETTTTEEEEEEC------C-CCEEEECS-----SCSCEEEEEEETTTTEEEEEE-TTT
T ss_pred CcceEEeeeecc----CceEEEecCCCeEEEEEcccCCCCC-cceEEEeC-----CCCCcccEEEEecCCceEEEE-CCC
Confidence 567789998753 24444443 4677777765421000 00011110 011234799988666555555 677
Q ss_pred ceEEEEeCCcce-EEEEe--eeCCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIHL-RTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.+.+.+... ..+.. ...|..+..- |.++.|.-+. ..+.|...++... ....+....-...+.
T Consensus 181 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavd------p~~g~ly~td~~~~~~I~~~~~dG~----~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRENGSKPRAIVVD------PVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNG 250 (400)
T ss_dssp TEEEEECTTTCSEEEEEECSSCCEEEEEEE------TTTTEEEEEECSSSCCEEEEETTSC----SCEEEECSSCSCEEE
T ss_pred CeEEEEeCCCCceEEEEeCCCCCcceEEEe------cccCeEEEEeCCCCCEEEEEeCCCC----ccEEEEECCCCceEE
Confidence 899999876432 22211 1234444433 2233443332 2367888887643 222222111356789
Q ss_pred EEECCCC-cEEEE-eCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 247 VCSSSTG-NIAVA-GADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 247 v~~sp~g-~lasg-s~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
|+++|++ .|+.+ ...+.|..+|+.......... +. .....++++. .+.++.+-...+.|..+|..+++.+..+
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~-l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST-TSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC-CCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 9999877 55444 557789999986432221111 12 2335567763 3455666666678999997666554444
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.55 E-value=0.24 Score=46.58 Aligned_cols=149 Identities=12% Similarity=0.143 Sum_probs=80.3
Q ss_pred EEEECCC-CceeEEEEecccceEEEEeC-CcceEEEEe-eeCCcceeeeccCCCCCCCCcEEEEEcC----Ce-EEEEeC
Q 017601 153 GLCFSPS-QWSMAAVARSFSKSIDVYDQ-DIHLRTLRT-LWYPSSLNFVQNLSPVNGGPNMLAVTEG----CQ-LTIWDL 224 (369)
Q Consensus 153 ~l~~~p~-~~~~~a~~~s~d~~i~lwd~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~lla~s~d----~~-v~iwD~ 224 (369)
+++|+|+ +...|.++ ...+.|+.+|. ...+..+.. ...|..+.+. +++. |..+... .. +...+.
T Consensus 143 gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~~~~~~~P~giavd------~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIKTTNIGQCADVNFT------LNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp EEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEECCCCSCEEEEEEC------TTCC-EEEEECCSCTTSEEEEEECG
T ss_pred eEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEeecCCCCccEEEEC------CCCC-EEEEcCCCCcccceEEEEEC
Confidence 7999994 23344444 22388999997 344443321 2233344433 4455 4433321 12 333333
Q ss_pred CcccCCceeeeeeccCCCcEEEEEECC-CCcEE-EEeCCCcEEEEeCCCceeeeecccc-ccCceEEEEEcCCCCCEEE-
Q 017601 225 RMKENGGCLHRICGSVGDILYAVCSSS-TGNIA-VAGADRTVTIYDPRRWSALSRWVHC-SKYEITGLSFSSIDSNYIY- 300 (369)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~la-sgs~D~~v~vwD~~~~~~~~~~~~h-~~~~v~~l~~sp~d~~~l~- 300 (369)
..+. .....+.. ......++++| +|.|. +-..++.|..+|..++.....+... ....-..++|+| +++.|+
T Consensus 215 ~~~~--~~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYv 289 (433)
T 4hw6_A 215 ASGF--TERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYI 289 (433)
T ss_dssp GGTT--CCEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEE
T ss_pred CCCe--eccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEE
Confidence 2211 10011221 24456788999 66444 4446778999998876652322211 022235799999 998544
Q ss_pred EEECCCeEEEEECc
Q 017601 301 VQGVDYEVFCGQWR 314 (369)
Q Consensus 301 s~s~D~~i~vwd~~ 314 (369)
+-...+.|+.+|..
T Consensus 290 ad~~~~~I~~~~~d 303 (433)
T 4hw6_A 290 IYNGKHCIYRVDYN 303 (433)
T ss_dssp EETTTTEEEEEEBC
T ss_pred EeCCCCEEEEEeCC
Confidence 44556799998875
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.51 E-value=0.018 Score=56.71 Aligned_cols=63 Identities=10% Similarity=0.065 Sum_probs=45.8
Q ss_pred CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC
Q 017601 261 DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS 326 (369)
Q Consensus 261 D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~ 326 (369)
++.|..||+++++.+-+.... .++..-.... .+.+++.++.|+.++.||.++++.+-.++...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 688999999999887655433 2222211222 45778889999999999999999998887544
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.33 E-value=0.38 Score=46.07 Aligned_cols=158 Identities=11% Similarity=-0.009 Sum_probs=86.2
Q ss_pred EEEECCC-CceeEEEEecccceEEEEeCCc-ceEEEEeee-----CCcceee-eccCCCCCCCCcEEEEEcCC-------
Q 017601 153 GLCFSPS-QWSMAAVARSFSKSIDVYDQDI-HLRTLRTLW-----YPSSLNF-VQNLSPVNGGPNMLAVTEGC------- 217 (369)
Q Consensus 153 ~l~~~p~-~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~~-----~~~~v~~-~~~~~~~~~~~~lla~s~d~------- 217 (369)
+++|+|. +..++++. ...+.|++.|... .+..+.... .+..+.+ .....+++++..|+.+...+
T Consensus 143 ~la~dp~~~~~Lyv~~-~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 143 RLAFDPLNKDHLYICY-DGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEETTEEEEEEEEE-ETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred EEEEccCCCCEEEEEE-CCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 6999994 44444444 3446788888764 555443221 1333444 01111235566566555433
Q ss_pred eEEEEeCCc-ccCCc-e-eeeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCC-------Ccee-----------
Q 017601 218 QLTIWDLRM-KENGG-C-LHRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPR-------RWSA----------- 274 (369)
Q Consensus 218 ~v~iwD~~~-~~~~~-~-~~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~-------~~~~----------- 274 (369)
.|.+.+-.. +.-.. . .+.+..- .....++++|++ ++++-..++.|..+|+. ++..
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred eEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266666333 11000 0 0122211 334578899955 55666678889999987 4433
Q ss_pred eeec-c-ccccCceEEEEEcCCCCCEEE-EEECCCeEEEEECcC
Q 017601 275 LSRW-V-HCSKYEITGLSFSSIDSNYIY-VQGVDYEVFCGQWRE 315 (369)
Q Consensus 275 ~~~~-~-~h~~~~v~~l~~sp~d~~~l~-s~s~D~~i~vwd~~~ 315 (369)
...+ . +. ...-+.|+|+| ++++|+ +-+..+.|+.+|...
T Consensus 300 ~~~l~~~~~-~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 300 FKQLFTIAD-PSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEEEECSS-SSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred cceeEecCC-CCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCC
Confidence 1111 1 12 34468999999 999544 445567899977643
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.28 E-value=0.47 Score=42.77 Aligned_cols=156 Identities=7% Similarity=0.052 Sum_probs=99.7
Q ss_pred CCcceeeeccCCCCCCCCcEEEEE-cCCeEEEEeCCcccCCceee-eeec-----cCCCcEEEEEE---CCCC-cEEEEe
Q 017601 191 YPSSLNFVQNLSPVNGGPNMLAVT-EGCQLTIWDLRMKENGGCLH-RICG-----SVGDILYAVCS---SSTG-NIAVAG 259 (369)
Q Consensus 191 ~~~~v~~~~~~~~~~~~~~lla~s-~d~~v~iwD~~~~~~~~~~~-~~~~-----~~~~~v~~v~~---sp~g-~lasgs 259 (369)
.|..+.|-. ..+.|..++ ..++|..||...+ .... .+.+ .....++.|.| .|++ ++++..
T Consensus 14 yPE~~~wd~------~~g~~~vs~l~~g~V~~~~~~~~---~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 14 TPEDTIYDR------TRQVFYQSNLYKGRIEVYNPKTQ---SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp CCSCEEEET------TTTEEEEEETTTTEEEEECTTTC---CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred CCcCccCcC------CCCEEEEEeccCCEEEEEcCCCC---eEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 345555543 234666555 5899999998754 2222 2221 10124689999 6889 555433
Q ss_pred -------------CCCcEEEEeCC---Cceeeee--cccc----------ccCceEEEEEcCCCCCEEEEEECC-CeEEE
Q 017601 260 -------------ADRTVTIYDPR---RWSALSR--WVHC----------SKYEITGLSFSSIDSNYIYVQGVD-YEVFC 310 (369)
Q Consensus 260 -------------~D~~v~vwD~~---~~~~~~~--~~~h----------~~~~v~~l~~sp~d~~~l~s~s~D-~~i~v 310 (369)
.++.|..||+. +++.+.. +... .......++..+ +|+..++++.- +.|..
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIAR 163 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEE
Confidence 26789999999 7766543 2221 012488999999 99999998888 88777
Q ss_pred EECcCCceeEEEEcC----C--CeeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 311 GQWRESSKVFAFRGD----S--NWLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 311 wd~~~~~~~~~~~g~----~--~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
.+........-+... . ...++...++|.+|+.....|.|..+|+.+
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 776543222222111 1 124777788998888776699999999874
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.27 E-value=0.6 Score=41.85 Aligned_cols=203 Identities=9% Similarity=-0.068 Sum_probs=109.5
Q ss_pred ceeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....++|.+.+ ..|.-.|. .+.|+.++.+..... ...+.... ..-.++++.+.+..++.+- ...
T Consensus 35 ~~~~~ld~d~~~----~~lyw~D~~~~~I~r~~~~g~~~~----~~~~~~~l-----~~p~glavd~~~g~ly~~d-~~~ 100 (318)
T 3sov_A 35 EDAAAVDFVFSH----GLIYWSDVSEEAIKRTEFNKTESV----QNVVVSGL-----LSPDGLACDWLGEKLYWTD-SET 100 (318)
T ss_dssp EEEEEEEEEGGG----TEEEEEETTTTEEEEEETTSSSCC----CEEEEECC-----SCCCEEEEETTTTEEEEEE-TTT
T ss_pred CccEEEEEEeCC----CEEEEEECCCCcEEEEEccCCCce----EEEEcCCC-----CCccEEEEEcCCCeEEEEE-CCC
Confidence 345688888753 24444443 456777776543110 00000000 0123789988666655554 667
Q ss_pred ceEEEEeCCcce-EEEE--eeeCCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIHL-RTLR--TLWYPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~~-~~~~--~~~~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.+++.+... +.+. ....|..+..-. .++.|..+. ..+.|...++... ....+....-...+.
T Consensus 101 ~~I~~~~~dG~~~~~l~~~~~~~P~giavdp------~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~l~~Png 170 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFWQELDQPRAIALDP------SSGFMYWTDWGEVPKIERAGMDGS----SRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSEEEEEEEG------GGTEEEEEECSSSCEEEEEETTSC----SCEEEECSSCSCEEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCCccEEEEeC------CCCEEEEEecCCCCEEEEEEcCCC----CeEEEEECCCCCccE
Confidence 889999876322 2221 122344444432 233443333 2467888887533 222222111256789
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
++|+|++ .| .+=+..+.|..+|+........+.+. .....++++.. +.++.+-...+.|..+|..+++....+
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC-CSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC-CCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 9999976 44 44456788999998642222122223 34456777754 355556556778999998776554444
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.24 E-value=1.2 Score=45.19 Aligned_cols=207 Identities=10% Similarity=-0.047 Sum_probs=106.3
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
..+..|+|++.+ ..+..+-...+.|+.++++..... ......+.... ..-.+|++.+.+..++.+- ...+
T Consensus 424 ~~~~gl~~d~~~---~~lY~sD~~~~~I~~~~l~g~~~~-~~~~~vi~~~l-----~~P~GLAvD~~~~~LY~tD-~~~~ 493 (791)
T 3m0c_C 424 RNVVALDTEVAS---NRIYWSDLSQRMICSTQLDRAHGV-SSYDTVISRDI-----QAPDGLAVDWIHSNIYWTD-SVLG 493 (791)
T ss_dssp SSEEEEEEETTT---TEEEEEETTTTEEEEEEC---------CEEEECSSC-----SCCCEEEEETTTTEEEEEE-TTTT
T ss_pred CceEEEeecccC---CeeEEeeccceeEEEEeccCCCCC-cceeEEEecCC-----CCcceeeeeecCCcEEEEe-cCCC
Confidence 456788887743 223333333466777776532100 00001111000 1123799988666665555 7788
Q ss_pred eEEEEeCCcce-EEEEe--eeCCcceeeeccCCCCCCCCcEEEEE-c-CCeEEEEeCCcccCCceeeeeeccCCCcEEEE
Q 017601 173 SIDVYDQDIHL-RTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVT-E-GCQLTIWDLRMKENGGCLHRICGSVGDILYAV 247 (369)
Q Consensus 173 ~i~lwd~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s-~-d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v 247 (369)
.|.+.+.+... +.+.. +..|..+++-. ..+.|.-+. . .+.|...++... ....+........+.|
T Consensus 494 ~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp------~~g~LYwtD~g~~~~I~~~~~dG~----~~~~lv~~~l~~P~GL 563 (791)
T 3m0c_C 494 TVSVADTKGVKRKTLFRENGSKPRAIVVDP------VHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNGI 563 (791)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEEEEEEET------TTTEEEEEECSSSCEEEEEETTSC----CEEEEECSSCSCEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCCcceEEEec------CCCCEEEecCCCCCeEEEEecCCC----ceEEEEeCCCCCceEE
Confidence 99999986433 33321 12344444432 233333332 2 367888888643 2222322213578899
Q ss_pred EECCCC-cEEEE-eCCCcEEEEeCCCceeeeeccc--cccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 248 CSSSTG-NIAVA-GADRTVTIYDPRRWSALSRWVH--CSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 248 ~~sp~g-~lasg-s~D~~v~vwD~~~~~~~~~~~~--h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
++++.+ +|+.+ ...+.|...|+........+.. . -....+|++.. +.++++-...+.|...|..+++.+..+
T Consensus 564 avD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~-l~~P~glav~~--~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 564 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT-TSSEEEEEEET--TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc-cCCCCEEEEeC--CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 999776 55444 4567899999864332222222 2 12345666643 344445455678888886665443333
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.22 E-value=0.063 Score=54.01 Aligned_cols=204 Identities=10% Similarity=-0.022 Sum_probs=103.5
Q ss_pred eeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecccc
Q 017601 94 EVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFSK 172 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d~ 172 (369)
.+..|+|++.+ ..|.-.|. .+.|+.+++....... .....+... . ..-.++++.+.+..++++- ...+
T Consensus 407 ~p~gla~d~~~----~~Ly~sD~~~~~I~~~~~~g~~~~~-~~~~~i~~~---~--~~P~glavD~~~g~LY~tD-~~~~ 475 (699)
T 1n7d_A 407 NVVALDTEVAS----NRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRD---I--QAPDGLAVDWIHSNIYWTD-SVLG 475 (699)
T ss_dssp TCCCCEEETTT----TEEEECCTTTTSBEEEESCCCCC-C-CCCCBCCSC---C----CCCEECCCSSSBCEECC-TTTS
T ss_pred ceEEEcccccc----CeEEEEecCCCeEEEEecCCCCCCc-ceEEEEeCC---C--CCcceEEEEeeCCcEEEEe-ccCC
Confidence 45577887653 34444443 4677777765310000 000001000 0 0112688887555555544 5678
Q ss_pred eEEEEeCCcce-EEEEe--eeCCcceeeeccCCCCCCCCcEEEEE-c-CCeEEEEeCCcccCCceeeee-eccCCCcEEE
Q 017601 173 SIDVYDQDIHL-RTLRT--LWYPSSLNFVQNLSPVNGGPNMLAVT-E-GCQLTIWDLRMKENGGCLHRI-CGSVGDILYA 246 (369)
Q Consensus 173 ~i~lwd~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~~~lla~s-~-d~~v~iwD~~~~~~~~~~~~~-~~~~~~~v~~ 246 (369)
.|.+++.+... +.+.. ...|..+++ ++.++.|..+. . .+.|..+++... ....+ ... ....+.
T Consensus 476 ~I~v~d~dg~~~~~l~~~~~~~P~giav------Dp~~g~ly~td~~~~~~I~~~~~dG~----~~~~l~~~~-l~~PnG 544 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFREQGSKPRAIVV------DPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTEN-IQWPNG 544 (699)
T ss_dssp CEEEEBSSSCCEEEECCCSSCCCCCEEC------CSSSSCCEECCCSSSCCEEBCCSSSC----CCCEESCSS-CSSCCC
T ss_pred eEEEEecCCCceEEEEeCCCCCcceEEE------ccCCCcEEEcccCCCCeEEEEeCCCC----CeeEEEeCC-CCCccE
Confidence 89999876432 22211 123334332 23333433322 2 267777777533 11112 111 245678
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
|+|+|++ +| ++-+..+.|.++|+........+. .. .....+|++.. + .++++....+.|..+|..+++.+..+
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~-~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSS-CSSCCCCEEET-T-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCc-CCCceEeEEEC-C-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 9999987 44 444567789999986422221111 11 12344556554 3 45555556678999998776555544
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.05 E-value=0.85 Score=41.61 Aligned_cols=168 Identities=15% Similarity=0.140 Sum_probs=92.5
Q ss_pred ccceEEEEeCCc---ceEEEEeee--------CCcceeeeccCCCCCCCC-cEEEEEc---CCeEEEEeCCcccC-Ccee
Q 017601 170 FSKSIDVYDQDI---HLRTLRTLW--------YPSSLNFVQNLSPVNGGP-NMLAVTE---GCQLTIWDLRMKEN-GGCL 233 (369)
Q Consensus 170 ~d~~i~lwd~~~---~~~~~~~~~--------~~~~v~~~~~~~~~~~~~-~lla~s~---d~~v~iwD~~~~~~-~~~~ 233 (369)
.++.|.++|... ..+.+.... +|..+.+... .++. +|+.+.. +.++.||++..... ...+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d----~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID----DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC----TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC----CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE
Confidence 578899999752 233343321 2334444331 1233 4555532 56888988765321 1233
Q ss_pred eeeeccCCCcEEEEEECCCC-cEEEEe-----------------CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCC
Q 017601 234 HRICGSVGDILYAVCSSSTG-NIAVAG-----------------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSID 295 (369)
Q Consensus 234 ~~~~~~~~~~v~~v~~sp~g-~lasgs-----------------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d 295 (369)
..+.+......+.+++.++| .+++.. ..+.|.-+|.. + +..+... -..-+.++||| |
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~-l~~pNGia~sp-D 231 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEG-FDFANGINISP-D 231 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEE-ESSEEEEEECT-T
T ss_pred eccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecC-CcccCcceECC-C
Confidence 44544334568999999999 555543 12445555543 2 2222222 24568999999 9
Q ss_pred CCEEEEEE-CCCeEEEEECcC-Cce--eEEEEcCCCeeeeeEcC-CCCEEEEEeCC
Q 017601 296 SNYIYVQG-VDYEVFCGQWRE-SSK--VFAFRGDSNWLGFSKCS-NRDVLGGWSDS 346 (369)
Q Consensus 296 ~~~l~s~s-~D~~i~vwd~~~-~~~--~~~~~g~~~~~~~~~~~-d~~~l~sgs~d 346 (369)
++.|+.+. ..++|..||+.. +.. ...+.-...-.++...+ +|.+.+++..+
T Consensus 232 g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 98776654 578999999864 322 12332111114555555 47777766533
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.93 E-value=0.94 Score=41.13 Aligned_cols=73 Identities=11% Similarity=0.108 Sum_probs=39.2
Q ss_pred eeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC---CceeEEEEeccc
Q 017601 95 VQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS---QWSMAAVARSFS 171 (369)
Q Consensus 95 V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~---~~~~~a~~~s~d 171 (369)
-..++|.|++ . +...+..|.|++++ + + . ... ...+. .....+.+-.+++|+|+ +..++++. ...
T Consensus 33 P~~ia~~pdG----~-l~V~e~~g~I~~i~-~-g-~-~~~-~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~-~~~ 99 (352)
T 2ism_A 33 PWALAFLPDG----G-MLIAERPGRIRLFR-E-G-R-LST-YAELS--VYHRGESGLLGLALHPRFPQEPYVYAYR-TVA 99 (352)
T ss_dssp EEEEEECTTS----C-EEEEETTTEEEEEE-T-T-E-EEE-EEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEE-EEC
T ss_pred ceEEEEcCCC----e-EEEEeCCCeEEEEE-C-C-C-ccE-eecce--EeecCCCCceeEEECCCCCCCCEEEEEE-ecC
Confidence 4689999984 3 44446679999887 2 2 1 000 00111 11112345668999996 34444443 322
Q ss_pred -----ceEEEEeCC
Q 017601 172 -----KSIDVYDQD 180 (369)
Q Consensus 172 -----~~i~lwd~~ 180 (369)
..|..|+..
T Consensus 100 ~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 100 EGGLRNQVVRLRHL 113 (352)
T ss_dssp TTSSEEEEEEEEEC
T ss_pred CCCCccEEEEEEeC
Confidence 567777654
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.93 E-value=1.2 Score=42.46 Aligned_cols=210 Identities=10% Similarity=0.062 Sum_probs=105.0
Q ss_pred eeEEEEee-cCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEE-------CCCCceeEEE
Q 017601 95 VQSIALAE-TDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCF-------SPSQWSMAAV 166 (369)
Q Consensus 95 V~~l~~s~-~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~p~~~~~~a~ 166 (369)
-..|+|+| ++ ..+.++-+....|++.|..... +. .+.... ...-..-.+++| ++++..++++
T Consensus 141 p~~la~dp~~~---~~Lyv~~~~~~~i~~ID~~~~~--v~----~l~~~~-~~~~~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNK---DHLYICYDGHKAIQLIDLKNRM--LS----SPLNIN-TIPTNRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEE---EEEEEEEETEEEEEEEETTTTE--EE----EEECCT-TSSCSBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCC---CEEEEEECCCCeEEEEECCCCE--EE----EEEccC-ccccCCCcEEEEeecccccCCCCCEEEEE
Confidence 45788887 32 2344444444567766665331 10 110000 000112357999 9976645555
Q ss_pred Eeccc------ceEEEEeCCc--ce------EEEEeeeCCcceeeeccCCCCCCCCcEEE-EEcCCeEEEEeCC------
Q 017601 167 ARSFS------KSIDVYDQDI--HL------RTLRTLWYPSSLNFVQNLSPVNGGPNMLA-VTEGCQLTIWDLR------ 225 (369)
Q Consensus 167 ~~s~d------~~i~lwd~~~--~~------~~~~~~~~~~~v~~~~~~~~~~~~~~lla-~s~d~~v~iwD~~------ 225 (369)
. ..+ ..|.+++... .. +.+....++..+... ++++.|.. -..+++|..+|+.
T Consensus 211 d-~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavd------p~~g~LYvtd~~~g~V~r~d~~~~~~~~ 283 (496)
T 3kya_A 211 I-DYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIH------PINGELYFNSYEKGQVFRLDLVDYFKTI 283 (496)
T ss_dssp E-CCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEEC------TTTCCEEEEETTTTEEEEECHHHHHHHH
T ss_pred e-CCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEc------CCCCeEEEEECCCCEEEEEecccccccc
Confidence 4 332 2366665322 11 233334455554432 33455554 4467889999987
Q ss_pred -cccCCce--------eee-eeccCCCcEEEEEECCCC-cEEE-EeCCCcEEEEeC--CCceee--eeccc------cc-
Q 017601 226 -MKENGGC--------LHR-ICGSVGDILYAVCSSSTG-NIAV-AGADRTVTIYDP--RRWSAL--SRWVH------CS- 282 (369)
Q Consensus 226 -~~~~~~~--------~~~-~~~~~~~~v~~v~~sp~g-~las-gs~D~~v~vwD~--~~~~~~--~~~~~------h~- 282 (369)
++....+ ... +........+.|+|+|+| .|.. -...+.|+.+|. .++... .++.+ ..
T Consensus 284 ~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 284 KNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp HTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBC
T ss_pred cCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccC
Confidence 4421000 111 222112456899999999 5444 456778888554 333221 11211 10
Q ss_pred -------cCceE-EEEEc-------CCCCCEEEEEECCCeEEEEECcCCceeEEEEc
Q 017601 283 -------KYEIT-GLSFS-------SIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG 324 (369)
Q Consensus 283 -------~~~v~-~l~~s-------p~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g 324 (369)
-..-. .+... + ++.++++=....+|+.++ ..+ .+.++-|
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~-~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG 417 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEE-EYDFYFVDRLNFCVRKVT-PEG-IVSTYAG 417 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSC-CEEEEEEEGGGTEEEEEC-TTC-BEEEEEE
T ss_pred CcccccccCCCeEEEEEccccccccC-CCeEEEEECCCCEEEEEe-CCC-CEEEEec
Confidence 01223 34443 4 566666666678899988 344 4445543
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.91 E-value=1.7 Score=43.92 Aligned_cols=192 Identities=8% Similarity=-0.047 Sum_probs=109.1
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEee-----e---CCcceeeeccCCCCCCCCcEEEEEcCCeEE
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRTL-----W---YPSSLNFVQNLSPVNGGPNMLAVTEGCQLT 220 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~~-----~---~~~~v~~~~~~~~~~~~~~lla~s~d~~v~ 220 (369)
.+.++...+++ .+-++ ..++-|..|+... ....+... . ....+..+. .++ ++.|..++.++-|.
T Consensus 314 ~v~~i~~D~~g--~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~---~d~-~g~lWigt~~~Gl~ 386 (781)
T 3v9f_A 314 SARYIFQDSFN--NIWIG-TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVC---DDG-QGKLWIGTDGGGIN 386 (781)
T ss_dssp CEEEEEECSSC--CEEEE-EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEE---ECT-TSCEEEEEBSSCEE
T ss_pred eEEEEEEeCCC--CEEEE-ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEE---EcC-CCCEEEEeCCCcEE
Confidence 46677777743 33444 4567788888653 22222110 0 111222222 112 35677777777799
Q ss_pred EEeCCcccCCceeeeee----ccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeecc--ccccCceEEEEEcCC
Q 017601 221 IWDLRMKENGGCLHRIC----GSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWV--HCSKYEITGLSFSSI 294 (369)
Q Consensus 221 iwD~~~~~~~~~~~~~~----~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~--~h~~~~v~~l~~sp~ 294 (369)
.||..++ .. ..+. .. ...|++++..++|.|-.|..++-+..+|.++++...-.. .. ...|.++...+
T Consensus 387 ~~~~~~~---~~-~~~~~~~~~~-~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~- 459 (781)
T 3v9f_A 387 VFENGKR---VA-IYNKENRELL-SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDK- 459 (781)
T ss_dssp EEETTEE---EE-ECC-----CC-CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTC-CCCEEEEEECT-
T ss_pred EEECCCC---eE-EEccCCCCCC-CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECC-
Confidence 9998754 22 2111 11 367999999888866667777779999987765432211 12 46799998888
Q ss_pred CCCEEEEEECCCeEEEEECcCCceeEEEEcC------CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 295 DSNYIYVQGVDYEVFCGQWRESSKVFAFRGD------SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 295 d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~------~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
++.+.+. .. +.+.++|..+++........ .....+....+|.+.+ |+.++-|..||..+++
T Consensus 460 ~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 460 NKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQL 526 (781)
T ss_dssp TSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCE
T ss_pred CCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCe
Confidence 7765554 44 67889998876544333221 1112333334666555 4444447778876553
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.77 E-value=1.9 Score=43.52 Aligned_cols=193 Identities=9% Similarity=-0.013 Sum_probs=106.7
Q ss_pred CeeEEEECCCCceeEEEEecccceEEEEeCCcce-EEEEee-e-CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCc
Q 017601 150 SWSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHL-RTLRTL-W-YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRM 226 (369)
Q Consensus 150 ~~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~-~~~~~~-~-~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~ 226 (369)
.+.+++..+++ .+-++ ..++-+..||..... ..+... . ....+..+. .++ ++.|..++.++.+..+|.++
T Consensus 364 ~v~~i~~d~~g--~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~---~d~-~g~lWigt~~~Gl~~~~~~~ 436 (781)
T 3v9f_A 364 VVSSVCDDGQG--KLWIG-TDGGGINVFENGKRVAIYNKENRELLSNSVLCSL---KDS-EGNLWFGTYLGNISYYNTRL 436 (781)
T ss_dssp CEEEEEECTTS--CEEEE-EBSSCEEEEETTEEEEECC-----CCCSBEEEEE---ECT-TSCEEEEETTEEEEEECSSS
T ss_pred ceEEEEEcCCC--CEEEE-eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE---ECC-CCCEEEEeccCCEEEEcCCC
Confidence 36677776633 33444 445668888875322 111100 0 112222222 112 35677777777899999876
Q ss_pred ccCCceeeeeec--cCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeec--cc--cccCceEEEEEcCCCCCEEE
Q 017601 227 KENGGCLHRICG--SVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRW--VH--CSKYEITGLSFSSIDSNYIY 300 (369)
Q Consensus 227 ~~~~~~~~~~~~--~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~--~~--h~~~~v~~l~~sp~d~~~l~ 300 (369)
+ + +..+.. .....|+++...++|.|-.|.. +-|..||..+++..... .. .....|.++...+ ++.+.+
T Consensus 437 ~---~-~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWi 510 (781)
T 3v9f_A 437 K---K-FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWI 510 (781)
T ss_dssp C---E-EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEE
T ss_pred C---c-EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEE
Confidence 5 3 233321 1136799999999885555555 55888998775433211 10 0035689999988 887665
Q ss_pred EEECCCeEEEEECcCCceeEEEEc-C----CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCc
Q 017601 301 VQGVDYEVFCGQWRESSKVFAFRG-D----SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKE 358 (369)
Q Consensus 301 s~s~D~~i~vwd~~~~~~~~~~~g-~----~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~ 358 (369)
. ..++-+..+|.++++. ..+.. + .....+....+|.+.++. .+|.|..||.++++
T Consensus 511 g-t~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 511 G-TFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp E-ESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred E-EcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 4 4444577788776543 33321 1 111233333466665554 47766888877654
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.76 E-value=0.85 Score=41.63 Aligned_cols=70 Identities=11% Similarity=0.161 Sum_probs=45.6
Q ss_pred CcEEEEEECCCC-cE-EEEeCCCcEEEEeCCC-cee--eeeccccccCceEEEEEcCCC-CCEEEEEECCC-eEEEEECc
Q 017601 242 DILYAVCSSSTG-NI-AVAGADRTVTIYDPRR-WSA--LSRWVHCSKYEITGLSFSSID-SNYIYVQGVDY-EVFCGQWR 314 (369)
Q Consensus 242 ~~v~~v~~sp~g-~l-asgs~D~~v~vwD~~~-~~~--~~~~~~h~~~~v~~l~~sp~d-~~~l~s~s~D~-~i~vwd~~ 314 (369)
...+.++||||+ .| ++-+..+.|..||+.. ++. ...+ .. ....-.+++.+ + |++.+++..++ .|..||..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~-~g~PDGi~vD~-e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF-DTLVDNISVDP-VTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC-SSEEEEEEECT-TTCCEEEEEESCHHHHHSCCTT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC-CCCCceEEEeC-CCCcEEEEecCCceEEEEECCC
Confidence 567899999999 55 4445678999999863 322 2233 22 45567888887 6 88877776553 44444443
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.57 E-value=0.084 Score=52.58 Aligned_cols=112 Identities=13% Similarity=-0.019 Sum_probs=71.8
Q ss_pred EEEECC-CC-cEEEEeCCC-----------cEEEEeCCCce--eeeeccccccCceEEEEEcCCCCCEEEEEEC-CCeEE
Q 017601 246 AVCSSS-TG-NIAVAGADR-----------TVTIYDPRRWS--ALSRWVHCSKYEITGLSFSSIDSNYIYVQGV-DYEVF 309 (369)
Q Consensus 246 ~v~~sp-~g-~lasgs~D~-----------~v~vwD~~~~~--~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~-D~~i~ 309 (369)
++++.| ++ .++.|+.+. .+.+||+.+++ .+..+.........++++.+ ++++++.||. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceE
Confidence 556777 77 777777543 58899998744 33333222133345677888 9999999985 45899
Q ss_pred EEECcCCceeEEEEcC-CCee-eeeEcCCCCEEEEEe-CC-----CcEEEEECCCCc
Q 017601 310 CGQWRESSKVFAFRGD-SNWL-GFSKCSNRDVLGGWS-DS-----GSIFVADVVAKE 358 (369)
Q Consensus 310 vwd~~~~~~~~~~~g~-~~~~-~~~~~~d~~~l~sgs-~d-----g~I~iWd~~~~~ 358 (369)
+||..+.+-...-.-+ .++. ....++++++++.|+ .+ ..+.+||..+.+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9999875433221111 1222 233345889988888 44 579999998764
No 298
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.56 E-value=0.74 Score=42.97 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=70.6
Q ss_pred CCcEEEEEcCCeEEEEeCCcccC-C--------ceeeeeecc-----CCCcEEEEEECCCC----cEEEEeCCCcEEEEe
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKEN-G--------GCLHRICGS-----VGDILYAVCSSSTG----NIAVAGADRTVTIYD 268 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~-~--------~~~~~~~~~-----~~~~v~~v~~sp~g----~lasgs~D~~v~vwD 268 (369)
.+.++|...+.+|.|-.+..+.. . -..+.+... ...+|..+-|+|-+ .|++-..|++|++||
T Consensus 76 sG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yD 155 (452)
T 3pbp_A 76 SGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFD 155 (452)
T ss_dssp TSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEE
T ss_pred CCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEE
Confidence 46888888888999998873310 0 012233321 03679999999987 789999999999999
Q ss_pred CCCc--eeeeecc---------ccccCceEEEEEcCCCCCEEEEEE--CCCeEEEE
Q 017601 269 PRRW--SALSRWV---------HCSKYEITGLSFSSIDSNYIYVQG--VDYEVFCG 311 (369)
Q Consensus 269 ~~~~--~~~~~~~---------~h~~~~v~~l~~sp~d~~~l~s~s--~D~~i~vw 311 (369)
+... ++. .+. .. ...|.+++|.+ ++-.|...+ ..|.|+-.
T Consensus 156 l~~s~~~P~-~L~k~~~~fg~d~~-~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 156 ILNSQEKPI-VLNKPNNSFGLDAR-VNDITDLEFSK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTCTTSCCE-EESCCCSEEESCSS-CCCEEEEEECT-TSSCEEEEECTTSCEEEEE
T ss_pred cccCCCCCc-chhccccccCCCcc-cceEEEEEEcC-CCcEEEEEecCCCCCEEEE
Confidence 9862 222 222 22 36799999999 888888766 77877654
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.41 E-value=1.4 Score=39.43 Aligned_cols=193 Identities=11% Similarity=0.048 Sum_probs=96.7
Q ss_pred ccceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEecc
Q 017601 91 HRSEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSF 170 (369)
Q Consensus 91 H~~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~ 170 (369)
+.+.+..|.+.+++ .+++.+ ..|.++. .... +.++..... + ....+.++++.|. ..+++++ ..
T Consensus 120 ~~~~~~~i~~~~~~----~~~~~~-~~g~v~~--S~Dg-----G~tW~~~~~--~-~~~~~~~~~~~~~-~~~~~~g-~~ 182 (327)
T 2xbg_A 120 LPGSPRLIKALGNG----SAEMIT-NVGAIYR--TKDS-----GKNWQALVQ--E-AIGVMRNLNRSPS-GEYVAVS-SR 182 (327)
T ss_dssp CSSCEEEEEEEETT----EEEEEE-TTCCEEE--ESST-----TSSEEEEEC--S-CCCCEEEEEECTT-SCEEEEE-TT
T ss_pred CCCCeEEEEEECCC----CEEEEe-CCccEEE--EcCC-----CCCCEEeec--C-CCcceEEEEEcCC-CcEEEEE-CC
Confidence 34557788876652 445544 3565543 2222 112221110 0 1123567899984 4455555 44
Q ss_pred cceEEEEeC-CcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee-c--cCCCcEEE
Q 017601 171 SKSIDVYDQ-DIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC-G--SVGDILYA 246 (369)
Q Consensus 171 d~~i~lwd~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~-~--~~~~~v~~ 246 (369)
....+-.|. +..-+.+.. .....+..+.. .++ +.+++++.+|.+.+++...+ +.-..+. . .....+++
T Consensus 183 G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~---~~~-g~~~~~~~~G~~~~s~~D~G---~tW~~~~~~~~~~~~~~~~ 254 (327)
T 2xbg_A 183 GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGF---TPD-GRLWMIVNGGKIAFSDPDNS---ENWGELLSPLRRNSVGFLD 254 (327)
T ss_dssp SSEEEEECTTCSSCEEEEC-CSSSCEEEEEE---CTT-SCEEEEETTTEEEEEETTEE---EEECCCBCTTSSCCSCEEE
T ss_pred CcEEEEeCCCCCceeECCC-CCCCccceeEE---CCC-CCEEEEeCCceEEEecCCCC---CeeEeccCCcccCCcceEE
Confidence 344444454 333222221 11222222221 233 46777788888887742223 2211111 1 10245899
Q ss_pred EEECCCCcEEEEeCCCcEEEEeCC---CceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEE
Q 017601 247 VCSSSTGNIAVAGADRTVTIYDPR---RWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQ 312 (369)
Q Consensus 247 v~~sp~g~lasgs~D~~v~vwD~~---~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd 312 (369)
++|.+++.++.++.++.|. +... +++.+...... ...+.++.|.+ ++ .++.++.+++|.-++
T Consensus 255 v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 255 LAYRTPNEVWLAGGAGALL-CSQDGGQTWQQDVDVKKV-PSNFYKILFFS-PD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EEESSSSCEEEEESTTCEE-EESSTTSSCEECGGGTTS-SSCCCEEEEEE-TT-EEEEECSTTEEEEEC
T ss_pred EEecCCCEEEEEeCCCeEE-EeCCCCcccEEcCccCCC-CCCeEEEEEEC-CC-ceEEEcCCceEEEEc
Confidence 9999888444444577663 3333 34444332233 45678898875 44 466777899887665
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.37 E-value=1.9 Score=42.48 Aligned_cols=191 Identities=10% Similarity=0.002 Sum_probs=104.3
Q ss_pred eEEEECCCCceeEEEEecccceEEEEeCCcc--eEEEEe--eeCCcceeeeccCCCCCCCCcEE-EEEcCCeEEEEeCCc
Q 017601 152 SGLCFSPSQWSMAAVARSFSKSIDVYDQDIH--LRTLRT--LWYPSSLNFVQNLSPVNGGPNML-AVTEGCQLTIWDLRM 226 (369)
Q Consensus 152 ~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~--~~~~~~--~~~~~~v~~~~~~~~~~~~~~ll-a~s~d~~v~iwD~~~ 226 (369)
.+++|++.++.++.+- ...+.|..++.+.. ...+.. ...|..+++-. .++.|. +-...+.|.+.|+..
T Consensus 43 ~~ld~~~~~~~ly~sD-~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~------~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW------LGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp EEEEEETTTTEEEEEE-TTTTEEEEEEC-----CEEEECSSCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEeCCCEEEEEE-CCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe------cCCEEEEEeCCCCEEEEEECCC
Confidence 4799999666555544 56778888876532 111111 12344444322 233343 344578999999875
Q ss_pred ccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC--CCcEEEEeCCCceeeeecc-ccccCceEEEEEcCCCCCEEEEE
Q 017601 227 KENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA--DRTVTIYDPRRWSALSRWV-HCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~--D~~v~vwD~~~~~~~~~~~-~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
. ....+..........|++.|.+ .|..... ...|...++.. .....+. .. -.....|++++ +.+.|+.+
T Consensus 116 ~----~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~-~~~P~Glald~-~~~~LY~a 188 (619)
T 3s94_A 116 S----LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSE-IYWPNGLTLDY-EEQKLYWA 188 (619)
T ss_dssp C----SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSS-CSSEEEEEEET-TTTEEEEE
T ss_pred C----CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCC-CCCCcEEEEEc-cCCEEEEE
Confidence 4 2222221113557789999975 5544443 45676667653 3222222 23 34578999999 65555544
Q ss_pred -ECCCeEEEEECcCCceeEEEE---cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 303 -GVDYEVFCGQWRESSKVFAFR---GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 -s~D~~i~vwd~~~~~~~~~~~---g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
...+.|...|+.......... .|. .++... .+.+..+-...+.|...|..+++.
T Consensus 189 D~~~~~I~~~~~dG~~~~~~~~~~~~~P--~gi~~~-~~~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 189 DAKLNFIHKSNLDGTNRQAVVKGSLPHP--FALTLF-EDILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp ETTTCCEEEESSSCCEEC---------C--CCEEES-SSEEEEECTTTCSEEEEESSSCCC
T ss_pred eCCCCeEEEecCCCCccEEEEeCCCCCc--eEEEEe-CCEEEEecCCCCEEEEEECCCCcc
Confidence 456789999987643322222 122 233322 234445555678899999877754
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.84 E-value=3.3 Score=40.73 Aligned_cols=197 Identities=10% Similarity=-0.046 Sum_probs=102.0
Q ss_pred ceeeEEEEeecCCCCceEEEEEec-CCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDS-YGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~-~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....|+|++.+ ..|.-.|. .++|+.++.+.... . ...+.. + -..-.++|+.+.+..++.+- ...
T Consensus 40 ~~~~~ld~~~~~----~~ly~sD~~~~~I~r~~~~g~~~-~---~~v~~~---~--~~~P~GlAvD~~~~~ly~~d-~~~ 105 (619)
T 3s94_A 40 EDAAAVDFVFSH----GLIYWSDVSEEAIKRTEFNKTES-V---QNVVVS---G--LLSPDGLACDWLGEKLYWTD-SET 105 (619)
T ss_dssp SCEEEEEEETTT----TEEEEEETTTTEEEEEEC------C---EEEECS---S--CSCEEEEEEETTTTEEEEEE-TTT
T ss_pred CceEEEEEEeCC----CEEEEEECCCCeEEEEEccCCCc-e---EEEEeC---C--CCCcCeEEEEecCCEEEEEe-CCC
Confidence 345688888753 24443443 45677776653310 0 001110 0 01234899998666555555 778
Q ss_pred ceEEEEeCCcc-eEEEE--eeeCCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIH-LRTLR--TLWYPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~-~~~~~--~~~~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.+.+.+.. .+.+. ....|..+.+-+ .++.|.-+. ..+.|...++... ....+........+.
T Consensus 106 ~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp------~~g~ly~tD~g~~~~I~r~~~dG~----~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 106 NRIEVSNLDGSLRKVLFWQELDQPRAIALDP------SSGFMYWTDWGEVPKIERAGMDGS----SRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCCCCEEEET------TTTEEEEEECSSSCEEEEEETTSC----SCEEEECSSCSSEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCCCCceEEEec------CCCeEEEeccCCCCEEEEEECCCC----ceEEEEeCCCCCCcE
Confidence 89999987643 22332 223455555543 233443332 2356666666532 222222111356789
Q ss_pred EEECCCC-cE-EEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC
Q 017601 247 VCSSSTG-NI-AVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES 316 (369)
Q Consensus 247 v~~sp~g-~l-asgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~ 316 (369)
|++++++ .| .+-...+.|...|+..........+. .....+|++.. + ..+.+-...+.|...|..++
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~gi~~~~-~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFE-D-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESS-S-EEEEECTTTCSEEEEESSSC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC-CCCceEEEEeC-C-EEEEecCCCCEEEEEECCCC
Confidence 9999876 44 44455778999998653332222222 22235677766 4 44444445678888887664
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.53 E-value=2.5 Score=37.78 Aligned_cols=187 Identities=9% Similarity=-0.034 Sum_probs=94.0
Q ss_pred eeEEEECCCCceeEEEEecccceE-EEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEE-EeCCccc
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSI-DVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTI-WDLRMKE 228 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i-~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~i-wD~~~~~ 228 (369)
+..+.+.+ +...++++ . ++.| +-.|.+..-..+.. .....+..+.. .++ +.+++++.++.+.. +|- .+.
T Consensus 124 ~~~i~~~~-~~~~~~~~-~-~g~v~~S~DgG~tW~~~~~-~~~~~~~~~~~---~~~-~~~~~~g~~G~~~~S~d~-gG~ 194 (327)
T 2xbg_A 124 PRLIKALG-NGSAEMIT-N-VGAIYRTKDSGKNWQALVQ-EAIGVMRNLNR---SPS-GEYVAVSSRGSFYSTWEP-GQT 194 (327)
T ss_dssp EEEEEEEE-TTEEEEEE-T-TCCEEEESSTTSSEEEEEC-SCCCCEEEEEE---CTT-SCEEEEETTSSEEEEECT-TCS
T ss_pred eEEEEEEC-CCCEEEEe-C-CccEEEEcCCCCCCEEeec-CCCcceEEEEE---cCC-CcEEEEECCCcEEEEeCC-CCC
Confidence 34577655 33455554 3 4444 44455544333321 11122222221 232 45666666555433 442 121
Q ss_pred CCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeecc----ccccCceEEEEEcCCCCCEEEEEEC
Q 017601 229 NGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWV----HCSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~----~h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
.-+.+. ... ...+..+++.+++.+..++.+|.+.+.+...++.-..+. .+ ...+.++.+.+ ++..++.+ .
T Consensus 195 tW~~~~-~~~--~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~g-~ 268 (327)
T 2xbg_A 195 AWEPHN-RTT--SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRN-SVGFLDLAYRT-PNEVWLAG-G 268 (327)
T ss_dssp SCEEEE-CCS--SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSC-CSCEEEEEESS-SSCEEEEE-S
T ss_pred ceeECC-CCC--CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccC-CcceEEEEecC-CCEEEEEe-C
Confidence 112221 112 367889999999955566678888877422232222211 12 34588999998 77766654 5
Q ss_pred CCeEEEEECcCCceeEEEEc----CCCeeeeeEcCCCCEEEEEeCCCcEEEEEC
Q 017601 305 DYEVFCGQWRESSKVFAFRG----DSNWLGFSKCSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 305 D~~i~vwd~~~~~~~~~~~g----~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~ 354 (369)
++.+ ++....++.-..+.. +..+..+... ++..++.++.+|.|.-++-
T Consensus 269 ~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~-~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 269 AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFF-SPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEE-ETTEEEEECSTTEEEEECC
T ss_pred CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEE-CCCceEEEcCCceEEEEcC
Confidence 7766 344444433222221 1222333333 3455777788998877653
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.37 E-value=4.4 Score=39.98 Aligned_cols=193 Identities=13% Similarity=-0.002 Sum_probs=111.2
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCc-ceEEEEe--eeCCcceeeeccCCCCCCCCcE-EEEEcCCeEEEEeCCc
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDI-HLRTLRT--LWYPSSLNFVQNLSPVNGGPNM-LAVTEGCQLTIWDLRM 226 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l-la~s~d~~v~iwD~~~ 226 (369)
..+++|++.++.++.+- ..++.|..++.+. ....+.. ...|..+++-. .++.| .+-...+.|.+.|+..
T Consensus 39 ~~~l~~d~~~~~lywtD-~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~------~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTD-ISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDW------LGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp EEEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred eEEEEEECCCCEEEEEE-CCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEe------CCCEEEEEECCCCEEEEEecCC
Confidence 45899999666655555 6788898888653 2222211 12344444422 12333 4444567899999865
Q ss_pred ccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe--CCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEE-
Q 017601 227 KENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG--ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQ- 302 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs--~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~- 302 (369)
. . ...+..........|++.|.. .|.... ..+.|...++.... ...+... -.....|++++ +++.|+.+
T Consensus 112 ~---~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~-~~~P~GlalD~-~~~~LY~aD 184 (628)
T 4a0p_A 112 Q---H-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPN-VGRANGLTIDY-AKRRLYWTD 184 (628)
T ss_dssp T---T-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECS-CSSEEEEEEET-TTTEEEEEE
T ss_pred C---c-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECC-CCCcceEEEcc-ccCEEEEEE
Confidence 4 2 222221113567899999854 554444 35677777775432 2232233 45678999999 66665555
Q ss_pred ECCCeEEEEECcCCceeEEEEcC-CCeeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 303 GVDYEVFCGQWRESSKVFAFRGD-SNWLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 303 s~D~~i~vwd~~~~~~~~~~~g~-~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
...+.|...|+..... ..+... ....++... .+.+.++-...+.|...|..+++.
T Consensus 185 ~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~-~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 185 LDTNLIESSNMLGLNR-EVIADDLPHPFGLTQY-QDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp TTTTEEEEEETTSCSC-EEEEECCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCEEEEEcCCCCce-EEeeccCCCceEEEEE-CCEEEEecCCCCEEEEEECCCCCc
Confidence 4567899999976433 233221 111333322 344455555678898888777753
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.33 E-value=2.9 Score=37.87 Aligned_cols=60 Identities=10% Similarity=-0.034 Sum_probs=33.9
Q ss_pred CceEEEEEc-------CCCCCEEEEEECCCeEEEEECcCC-cee--EEEE-c-CCCeeeeeEcCCCCEEEEEe
Q 017601 284 YEITGLSFS-------SIDSNYIYVQGVDYEVFCGQWRES-SKV--FAFR-G-DSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 284 ~~v~~l~~s-------p~d~~~l~s~s~D~~i~vwd~~~~-~~~--~~~~-g-~~~~~~~~~~~d~~~l~sgs 344 (369)
.....+.|. . ++.++++.-..+.|...++... +.. ..+. + ..+...+...+||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~-~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGL-RGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGG-TTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCccc-CCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 457788883 3 6777766666778888888753 221 2222 1 12223444455776655543
No 305
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.26 E-value=1.2 Score=39.02 Aligned_cols=141 Identities=14% Similarity=0.065 Sum_probs=72.1
Q ss_pred CCcEEEEEcC-----CeEEEEeCCcccCCceee--eeeccCCCcEEEEEECCCC-cEEEEeCC-------CcEEEEeCCC
Q 017601 207 GPNMLAVTEG-----CQLTIWDLRMKENGGCLH--RICGSVGDILYAVCSSSTG-NIAVAGAD-------RTVTIYDPRR 271 (369)
Q Consensus 207 ~~~lla~s~d-----~~v~iwD~~~~~~~~~~~--~~~~~~~~~v~~v~~sp~g-~lasgs~D-------~~v~vwD~~~ 271 (369)
+..++.++.+ ..+.+||+.+. +... .+... .....++.+ ++ .++.|+.+ ..+.+||+.+
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSN---EWFHVAPMNTR-RSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTT---EEEEECCCSSC-CBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCC---eEeecCCCCCc-ccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 3445555544 35788998865 2221 11111 111222222 56 56666542 4588999887
Q ss_pred --ceeeeeccccccCceEEEEEcCCCCCEEEEEECC-----CeEEEEECcCCceeEEEEc-CCCe-eeeeEcCCCCEEEE
Q 017601 272 --WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD-----YEVFCGQWRESSKVFAFRG-DSNW-LGFSKCSNRDVLGG 342 (369)
Q Consensus 272 --~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~g-~~~~-~~~~~~~d~~~l~s 342 (369)
++.+..+... ......+.+ ++.+++.|+.+ ..+.++|..+.+-...-.- ..+. .... ..++.+++.
T Consensus 183 ~~W~~~~~~p~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~ 257 (302)
T 2xn4_A 183 NEWTYIAEMSTR-RSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVV 257 (302)
T ss_dssp TEEEEECCCSSC-CBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEE
T ss_pred CcEEECCCCccc-cccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEE
Confidence 3444443322 222233333 55777777765 3688999887543221110 0000 1111 126677777
Q ss_pred EeCCC-----cEEEEECCCCc
Q 017601 343 WSDSG-----SIFVADVVAKE 358 (369)
Q Consensus 343 gs~dg-----~I~iWd~~~~~ 358 (369)
|+.++ .+.+||.++.+
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTE
T ss_pred CCcCCCcccccEEEEcCCCCe
Confidence 76553 48999987764
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.25 E-value=4.6 Score=39.80 Aligned_cols=195 Identities=9% Similarity=-0.072 Sum_probs=107.3
Q ss_pred ceeeEEEEeecCCCCceEEEEEe-cCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEeccc
Q 017601 93 SEVQSIALAETDSSGYMVLGSVD-SYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARSFS 171 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d-~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s~d 171 (369)
.....|+|++.+ ..+.-.| ..+.|+.++++.... ...+.... ..-.++|+.+.+..++.+- ...
T Consensus 37 ~~~~~l~~d~~~----~~lywtD~~~~~I~r~~~~g~~~-----~~v~~~g~-----~~P~GlAvD~~~~~LY~tD-~~~ 101 (628)
T 4a0p_A 37 KEASALDFDVTD----NRIYWTDISLKTISRAFMNGSAL-----EHVVEFGL-----DYPEGMAVDWLGKNLYWAD-TGT 101 (628)
T ss_dssp SCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCSC-----EEEECSSC-----SCCCEEEEETTTTEEEEEE-TTT
T ss_pred CceEEEEEECCC----CEEEEEECCCCeEEEEECCCCCc-----EEEEeCCC-----CCcceEEEEeCCCEEEEEE-CCC
Confidence 346789998863 2444333 456777777653311 00111000 0123799988666665655 677
Q ss_pred ceEEEEeCCcc-eEEEE--eeeCCcceeeeccCCCCCCCCcEEEEE--cCCeEEEEeCCcccCCceeeeeeccCCCcEEE
Q 017601 172 KSIDVYDQDIH-LRTLR--TLWYPSSLNFVQNLSPVNGGPNMLAVT--EGCQLTIWDLRMKENGGCLHRICGSVGDILYA 246 (369)
Q Consensus 172 ~~i~lwd~~~~-~~~~~--~~~~~~~v~~~~~~~~~~~~~~lla~s--~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~ 246 (369)
+.|.+.+.+.. .+.+. ....|..+..- |..+.|.-+. ..+.|...++... . ...+... ....+.
T Consensus 102 ~~I~v~~~dG~~~~~l~~~~l~~P~~iavd------p~~G~lY~tD~g~~~~I~r~~~dG~---~-~~~l~~~-~~~P~G 170 (628)
T 4a0p_A 102 NRIEVSKLDGQHRQVLVWKDLDSPRALALD------PAEGFMYWTEWGGKPKIDRAAMDGS---E-RTTLVPN-VGRANG 170 (628)
T ss_dssp TEEEEEETTSTTCEEEECSSCCCEEEEEEE------TTTTEEEEEECSSSCEEEEEETTSC---S-CEEEECS-CSSEEE
T ss_pred CEEEEEecCCCcEEEEEeCCCCCcccEEEc------cCCCeEEEeCCCCCCEEEEEeCCCC---c-eEEEECC-CCCcce
Confidence 89999987532 22221 12234444443 2233333332 2467777777644 1 2222222 367889
Q ss_pred EEECCCC-cEE-EEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCc
Q 017601 247 VCSSSTG-NIA-VAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESS 317 (369)
Q Consensus 247 v~~sp~g-~la-sgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~ 317 (369)
|++++++ .|. +=...+.|..+|+..... ..+... .....++++.. +.++.+-...+.|...|..+++
T Consensus 171 lalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~-l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD-LPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC-CSCEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred EEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc-CCCceEEEEEC--CEEEEecCCCCEEEEEECCCCC
Confidence 9999976 544 445677899999865332 233333 33456777754 3444454456788888876543
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.73 E-value=2.7 Score=36.62 Aligned_cols=133 Identities=15% Similarity=0.105 Sum_probs=68.6
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCC-----CcEEEEeCCCc--eeeeeccccccCceEE
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD-----RTVTIYDPRRW--SALSRWVHCSKYEITG 288 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D-----~~v~vwD~~~~--~~~~~~~~h~~~~v~~ 288 (369)
..+.+||+.+.. ...+..+... ...-.++.+ ++ .++.|+.+ ..+.+||+.+. +.+..+... ...-..
T Consensus 128 ~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~ 202 (301)
T 2vpj_A 128 TSMERYDPNIDQ-WSMLGDMQTA-REGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK-RSGAGV 202 (301)
T ss_dssp CEEEEEETTTTE-EEEEEECSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEE
T ss_pred ceEEEEcCCCCe-EEECCCCCCC-cccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc-cccceE
Confidence 468899987651 1112222111 111222222 56 66667654 46889998763 444333322 222233
Q ss_pred EEEcCCCCCEEEEEECC-----CeEEEEECcCCceeEEEEcC-CCe-eeeeEcCCCCEEEEEeCC-----CcEEEEECCC
Q 017601 289 LSFSSIDSNYIYVQGVD-----YEVFCGQWRESSKVFAFRGD-SNW-LGFSKCSNRDVLGGWSDS-----GSIFVADVVA 356 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~g~-~~~-~~~~~~~d~~~l~sgs~d-----g~I~iWd~~~ 356 (369)
+.+ ++.+++.|+.+ ..+.+||+.+.+-...-.-. .+. .... ..++.+++.|+.+ ..|.+||.++
T Consensus 203 ~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 203 ALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp EEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred EEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 333 55777777764 46889999875432221101 100 1111 1266777777655 4678889876
Q ss_pred Cc
Q 017601 357 KE 358 (369)
Q Consensus 357 ~~ 358 (369)
.+
T Consensus 279 ~~ 280 (301)
T 2vpj_A 279 DS 280 (301)
T ss_dssp TE
T ss_pred Ce
Confidence 53
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.68 E-value=1.6 Score=38.25 Aligned_cols=180 Identities=11% Similarity=0.011 Sum_probs=87.4
Q ss_pred CceeEEEEeccc----ceEEEEeCCcceE-EEEeeeCC---cceeeeccCCCCCCCCcEEEEEcC------CeEEEEeCC
Q 017601 160 QWSMAAVARSFS----KSIDVYDQDIHLR-TLRTLWYP---SSLNFVQNLSPVNGGPNMLAVTEG------CQLTIWDLR 225 (369)
Q Consensus 160 ~~~~~a~~~s~d----~~i~lwd~~~~~~-~~~~~~~~---~~v~~~~~~~~~~~~~~lla~s~d------~~v~iwD~~ 225 (369)
++.+++.+ +.+ ..+.+||...... .+.....+ ..+..+ ++..++.++.+ ..+.+||..
T Consensus 55 ~~~lyv~G-G~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 55 DNVVYILG-GSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-------EGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp TTEEEEEC-CBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-------TTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred CCEEEEEe-CCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-------CCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 34566666 443 5688888764332 22111111 111111 23344445543 468899988
Q ss_pred cccCCceeee--eeccCCCcEEEEEECCCC-cEEEEeC---------CCcEEEEeCCCc--eeeeeccccccCceEEEEE
Q 017601 226 MKENGGCLHR--ICGSVGDILYAVCSSSTG-NIAVAGA---------DRTVTIYDPRRW--SALSRWVHCSKYEITGLSF 291 (369)
Q Consensus 226 ~~~~~~~~~~--~~~~~~~~v~~v~~sp~g-~lasgs~---------D~~v~vwD~~~~--~~~~~~~~h~~~~v~~l~~ 291 (369)
+. +.... +... ...-.++.+ ++ .++.|+. -..+.+||+.+. +.+..+... ...-..+.+
T Consensus 127 ~~---~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~ 199 (306)
T 3ii7_A 127 TE---SWHTKPSMLTQ-RCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA-RKNHGLVFV 199 (306)
T ss_dssp TT---EEEEECCCSSC-CBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE
T ss_pred CC---ceEeCCCCcCC-cceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch-hhcceEEEE
Confidence 75 32211 1111 111122222 56 5566653 345889998874 444333322 222223333
Q ss_pred cCCCCCEEEEEECC-----CeEEEEECcCCceeEEEEcC-CCe-eeeeEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 017601 292 SSIDSNYIYVQGVD-----YEVFCGQWRESSKVFAFRGD-SNW-LGFSKCSNRDVLGGWSDS-----GSIFVADVVAKE 358 (369)
Q Consensus 292 sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~g~-~~~-~~~~~~~d~~~l~sgs~d-----g~I~iWd~~~~~ 358 (369)
++++++.|+.+ ..+.++|+.+.+-...-.-. .+. .... ..++.+++.|+.+ ..+.+||.++.+
T Consensus 200 ---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 200 ---KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA-AVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp ---TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE-EETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE-EECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 45677777654 35788888775322110000 000 1111 1167777777754 568889987754
No 309
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.55 Score=42.54 Aligned_cols=190 Identities=7% Similarity=-0.048 Sum_probs=96.3
Q ss_pred eeEEEEecccceEEEEeCC--cceEEEEeeeCCcceeeeccCCCCCCCCcEEEE--EcCCeEEEEeCCcccCCceeeeee
Q 017601 162 SMAAVARSFSKSIDVYDQD--IHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAV--TEGCQLTIWDLRMKENGGCLHRIC 237 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~--s~d~~v~iwD~~~~~~~~~~~~~~ 237 (369)
.++.++ +.|+.|.-+|.. +....+... ....+..... +..+.++.++.+ +.||.|..+|..++ .....+.
T Consensus 11 ~~V~v~-t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~-~~~~~~~~~~vv~p~~dG~l~a~~~~~G---~~~~~~~ 84 (339)
T 2be1_A 11 DILIAA-DVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQE-PSRLETYETLIIEPFGDGNIYYFNAHQG---LQKLPLS 84 (339)
T ss_dssp EEEEEE-ETTSCEEEEETTTTEEEEEECGG-GSCCSEECCC-SCTTTSSEEEEECCSTTTEEEEEETTTE---EEEEEEE
T ss_pred CEEEEE-eCCCeEEEEECCCCcEEEEecCC-ccCCcEEecC-CccccCCcEEEEEECCCCEEEEEECCCC---cEEeeec
Confidence 355666 788988888864 333333221 0011111111 111123345554 57999999998877 3333332
Q ss_pred ccC---CCcEEE---EEE------CCCCcEEEEeCCCcEEEEeCCCceeeeecccccc-Cce-----EEEE---EcC-CC
Q 017601 238 GSV---GDILYA---VCS------SSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSK-YEI-----TGLS---FSS-ID 295 (369)
Q Consensus 238 ~~~---~~~v~~---v~~------sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~-~~v-----~~l~---~sp-~d 295 (369)
... ..++.. ... +.++.+++|+.++.+...|+++|+.+-++..... ..+ .+.. +.. ..
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~ 164 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC 164 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccC
Confidence 210 112221 000 1344889999999999999999999887763201 100 0111 100 02
Q ss_pred CCEEEEEECCCeEEEEECcCCce----eEEEEcCCCeeee----eEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 296 SNYIYVQGVDYEVFCGQWRESSK----VFAFRGDSNWLGF----SKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 296 ~~~l~s~s~D~~i~vwd~~~~~~----~~~~~g~~~~~~~----~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+..++.+..++.+.+-+ ++++. ...+.....-..+ ....|+.+ +.++.||.|...|..+|+.
T Consensus 165 ~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 165 ENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCE
T ss_pred CCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcE
Confidence 35677777788777766 33321 1111111100000 00124565 4478899999999887764
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.66 E-value=2.7 Score=36.80 Aligned_cols=180 Identities=9% Similarity=-0.008 Sum_probs=87.1
Q ss_pred ceeEEEEecc-cceEEEEeCCcceEE-EEeeeCC---cceeeeccCCCCCCCCcEEEEEcC----CeEEEEeCCcccCCc
Q 017601 161 WSMAAVARSF-SKSIDVYDQDIHLRT-LRTLWYP---SSLNFVQNLSPVNGGPNMLAVTEG----CQLTIWDLRMKENGG 231 (369)
Q Consensus 161 ~~~~a~~~s~-d~~i~lwd~~~~~~~-~~~~~~~---~~v~~~~~~~~~~~~~~lla~s~d----~~v~iwD~~~~~~~~ 231 (369)
+.+++.++.. ...+.+||....... +.....+ ..+..+ ++..++.++.+ ..+.+||..+. +
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~d~~~~---~ 81 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-------DNVVYILGGSQLFPIKRMDCYNVVKD---S 81 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-------TTEEEEECCBSSSBCCEEEEEETTTT---E
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-------CCEEEEEeCCCCCCcceEEEEeCCCC---e
Confidence 4455665322 467888887643322 1111111 111111 23344445543 57889998876 3
Q ss_pred eee--eeeccCCCcEEEEEECCCC-cEEEEeCC------CcEEEEeCCCc--eeeeeccccccCceEEEEEcCCCCCEEE
Q 017601 232 CLH--RICGSVGDILYAVCSSSTG-NIAVAGAD------RTVTIYDPRRW--SALSRWVHCSKYEITGLSFSSIDSNYIY 300 (369)
Q Consensus 232 ~~~--~~~~~~~~~v~~v~~sp~g-~lasgs~D------~~v~vwD~~~~--~~~~~~~~h~~~~v~~l~~sp~d~~~l~ 300 (369)
... .+... .....++.+ ++ .++.|+.+ ..+.+||+.+. +.+..+... ...-..+.+ ++.+++
T Consensus 82 W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~iyv 154 (306)
T 3ii7_A 82 WYSKLGPPTP-RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEA---NGLIYV 154 (306)
T ss_dssp EEEEECCSSC-CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE---TTEEEE
T ss_pred EEECCCCCcc-ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEE---CCEEEE
Confidence 221 11111 122222223 56 66777755 46889998874 344333322 222222332 556666
Q ss_pred EEEC---------CCeEEEEECcCCceeEEEEc-CCCe-eeeeEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 017601 301 VQGV---------DYEVFCGQWRESSKVFAFRG-DSNW-LGFSKCSNRDVLGGWSDS-----GSIFVADVVAKE 358 (369)
Q Consensus 301 s~s~---------D~~i~vwd~~~~~~~~~~~g-~~~~-~~~~~~~d~~~l~sgs~d-----g~I~iWd~~~~~ 358 (369)
.|+. -..+.+||..+.+-...-.- ..+. .... ..++.+++.|+.+ ..+.+||..+.+
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 6664 34588899887533222110 0000 1111 1156666666543 468888887653
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.54 E-value=3.8 Score=35.65 Aligned_cols=135 Identities=12% Similarity=-0.021 Sum_probs=68.6
Q ss_pred CeEEEEeCCcccC--CceeeeeeccCCCcEEEEEECCCC-cEEEEeCC-----CcEEEEeCCC--ceeeeeccccccCce
Q 017601 217 CQLTIWDLRMKEN--GGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD-----RTVTIYDPRR--WSALSRWVHCSKYEI 286 (369)
Q Consensus 217 ~~v~iwD~~~~~~--~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D-----~~v~vwD~~~--~~~~~~~~~h~~~~v 286 (369)
..+.+||..+... ...+..+... .....++.+ ++ .++.|+.+ ..+.+||+.+ ++.+..+... ...-
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~ 153 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGA 153 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSC
T ss_pred ceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccc
Confidence 4689999987621 1122212111 122222222 56 66666643 3688999876 4444443322 2222
Q ss_pred EEEEEcCCCCCEEEEEECC-----CeEEEEECcCCceeEEEEc-CCCeeeeeEcCCCCEEEEEeCC-----CcEEEEECC
Q 017601 287 TGLSFSSIDSNYIYVQGVD-----YEVFCGQWRESSKVFAFRG-DSNWLGFSKCSNRDVLGGWSDS-----GSIFVADVV 355 (369)
Q Consensus 287 ~~l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~g-~~~~~~~~~~~d~~~l~sgs~d-----g~I~iWd~~ 355 (369)
..+.+ ++.+++.|+.+ ..+.++|+.+.+-...-.- ..+........++.+++.|+.+ ..+.+||.+
T Consensus 154 ~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 154 GLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp EEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred eEEEE---CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCC
Confidence 22332 56777777765 4588889877543222100 0100000111266677777654 468899987
Q ss_pred CCc
Q 017601 356 AKE 358 (369)
Q Consensus 356 ~~~ 358 (369)
+.+
T Consensus 231 ~~~ 233 (301)
T 2vpj_A 231 TDS 233 (301)
T ss_dssp TTE
T ss_pred CCc
Confidence 654
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.96 E-value=3.5 Score=35.92 Aligned_cols=134 Identities=14% Similarity=0.015 Sum_probs=66.2
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCC-----cEEEEeCCCc--eeeeeccccccCceEE
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADR-----TVTIYDPRRW--SALSRWVHCSKYEITG 288 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~-----~v~vwD~~~~--~~~~~~~~h~~~~v~~ 288 (369)
..+.+||..+.+ ...+..+... .....++.+ ++ .++.|+.++ .+.+||+.+. +.+..+... ...-..
T Consensus 77 ~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~ 151 (302)
T 2xn4_A 77 RTVDSYDPVKDQ-WTSVANMRDR-RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR-RSSVGV 151 (302)
T ss_dssp CCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC-CBSCEE
T ss_pred cceEEECCCCCc-eeeCCCCCcc-ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc-ccCceE
Confidence 368889988651 1111111111 112222222 56 666676553 5778998763 444333322 222222
Q ss_pred EEEcCCCCCEEEEEECC-------CeEEEEECcCCceeEEEEc-CCCeeeeeEcCCCCEEEEEeCC-----CcEEEEECC
Q 017601 289 LSFSSIDSNYIYVQGVD-------YEVFCGQWRESSKVFAFRG-DSNWLGFSKCSNRDVLGGWSDS-----GSIFVADVV 355 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D-------~~i~vwd~~~~~~~~~~~g-~~~~~~~~~~~d~~~l~sgs~d-----g~I~iWd~~ 355 (369)
+.+ ++.+++.|+.+ ..+.++|+.+.+-...-.- ..+........++.+++.|+.+ ..+.+||.+
T Consensus 152 ~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 152 GVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEE---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCC
Confidence 332 55677776643 3588889877543222100 0000000111266777777654 468889987
Q ss_pred CCc
Q 017601 356 AKE 358 (369)
Q Consensus 356 ~~~ 358 (369)
+.+
T Consensus 229 ~~~ 231 (302)
T 2xn4_A 229 TNA 231 (302)
T ss_dssp TTE
T ss_pred CCC
Confidence 653
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.59 E-value=3.5 Score=38.47 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=63.8
Q ss_pred EcCCeEEEEeCCcccCCceeeeeeccC---CCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCce----------e--eee
Q 017601 214 TEGCQLTIWDLRMKENGGCLHRICGSV---GDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWS----------A--LSR 277 (369)
Q Consensus 214 s~d~~v~iwD~~~~~~~~~~~~~~~~~---~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~----------~--~~~ 277 (369)
..++.||.-++... ..-+.+...+ ...|..+..||+| +||..+ +..|.|-.+..+. . ...
T Consensus 38 a~~n~iR~~~i~~~---~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~t 113 (452)
T 3pbp_A 38 IQDNIIRWYNVLTD---SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFH 113 (452)
T ss_dssp EETTEEEEEETTTC---SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEE
T ss_pred EECCEEEEEECCCC---CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeE
Confidence 34567777777644 2223333220 2356779999999 666654 6689888876321 0 112
Q ss_pred ccc------cccCceEEEEEcCC--CCCEEEEEECCCeEEEEECcC
Q 017601 278 WVH------CSKYEITGLSFSSI--DSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 278 ~~~------h~~~~v~~l~~sp~--d~~~l~s~s~D~~i~vwd~~~ 315 (369)
+.- . ..+|..+.|+|. .+..|++--.|++||+||+..
T Consensus 114 y~l~~~~~~~-~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 114 YSIDEEEVGP-KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEGGGCC--C-CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred EEcCCcccCC-CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 221 2 467999999994 356899999999999999986
No 314
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.48 E-value=7.4 Score=34.74 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=60.5
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC------CCcEEEEeC--CC--ceeeeeccccccCc
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA------DRTVTIYDP--RR--WSALSRWVHCSKYE 285 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~------D~~v~vwD~--~~--~~~~~~~~~h~~~~ 285 (369)
..+.+||..+.. ...+..+... ...-.+++.. ++ .++.|+. ...+.+||+ .+ ++.+..+... ...
T Consensus 168 ~~v~~yd~~~~~-W~~~~~~p~~-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~-~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQ-WSYAGESPWY-GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP-DGV 243 (357)
T ss_dssp CEEEEEETTTTE-EEEEEECSSC-CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT-TCC
T ss_pred ccEEEEeCCCCc-EEECCCCCCC-CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC-ccc
Confidence 578999988751 1122222111 0110222222 45 6666653 335777876 43 4444443222 111
Q ss_pred eEEEEEcCCCCCEEEEEECC----------------------CeEEEEECcCCceeEE--EEcCCCeeeeeEcCCCCEEE
Q 017601 286 ITGLSFSSIDSNYIYVQGVD----------------------YEVFCGQWRESSKVFA--FRGDSNWLGFSKCSNRDVLG 341 (369)
Q Consensus 286 v~~l~~sp~d~~~l~s~s~D----------------------~~i~vwd~~~~~~~~~--~~g~~~~~~~~~~~d~~~l~ 341 (369)
....+... ++.+++.|+.+ ..+.+||+.+.+-... +.... ........++.+++
T Consensus 244 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 244 AGGFAGIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR-AYGVSLPWNNSLLI 321 (357)
T ss_dssp BSCEEEEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC-BSSEEEEETTEEEE
T ss_pred ccceEEEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc-ccceeEEeCCEEEE
Confidence 11111122 55777777642 2577888877543222 21111 00011122677777
Q ss_pred EEeCCC------cEEEEECCCCcc
Q 017601 342 GWSDSG------SIFVADVVAKEN 359 (369)
Q Consensus 342 sgs~dg------~I~iWd~~~~~~ 359 (369)
.|+.++ .|.+.++++++-
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSC
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEe
Confidence 777543 355568877753
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.39 E-value=7.7 Score=35.02 Aligned_cols=102 Identities=11% Similarity=0.007 Sum_probs=56.4
Q ss_pred CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee--ccCCCcEEEEEECCC----CcEEEEeC----
Q 017601 191 YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC--GSVGDILYAVCSSST----GNIAVAGA---- 260 (369)
Q Consensus 191 ~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~--~~~~~~v~~v~~sp~----g~lasgs~---- 260 (369)
.|..+.+.. + +.|+.+..++.|+++| ..+. ..+..+. .........|+|+|+ +.|.....
T Consensus 30 ~P~~ia~~p------d-G~l~V~e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 30 VPWSIAPLG------G-GRYLVTERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp CEEEEEEEE------T-TEEEEEETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred CCeEEEEcC------C-CeEEEEeCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 455555554 3 4566666679999997 3341 2232221 111256889999998 54433322
Q ss_pred C----CcEEEEeCCCc-------eee-eeccccccCceEEEEEcCCCCCEEEEEE
Q 017601 261 D----RTVTIYDPRRW-------SAL-SRWVHCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 261 D----~~v~vwD~~~~-------~~~-~~~~~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
+ ..|..|+.... +.+ ..+..........+.|.| ||.+.++.+
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECC
T ss_pred CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEEC
Confidence 3 56777776543 111 112211011346799999 998877754
No 316
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.38 E-value=4.2 Score=35.73 Aligned_cols=133 Identities=11% Similarity=0.018 Sum_probs=66.6
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeC------CCcEEEEeCCC--ceeeeeccccccCceE
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGA------DRTVTIYDPRR--WSALSRWVHCSKYEIT 287 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~------D~~v~vwD~~~--~~~~~~~~~h~~~~v~ 287 (369)
..+.+||..+.. -..+..+... ...-.++. -++ .++.|+. -..+.+||+.+ ++.+..+... ...-.
T Consensus 117 ~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~ 191 (315)
T 4asc_A 117 DSVMCYDRLSFK-WGESDPLPYV-VYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA-RSLFG 191 (315)
T ss_dssp CCEEEEETTTTE-EEECCCCSSC-CBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC-CBSCE
T ss_pred ceEEEECCCCCc-EeECCCCCCc-ccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc-hhceE
Confidence 468899988751 1111111111 11112222 355 6666665 24689999887 4444433322 22223
Q ss_pred EEEEcCCCCCEEEEEECCC-----eEEEEECcCCceeEEEEcC-CCe-eeeeEcCCCCEEEEEeCC--------------
Q 017601 288 GLSFSSIDSNYIYVQGVDY-----EVFCGQWRESSKVFAFRGD-SNW-LGFSKCSNRDVLGGWSDS-------------- 346 (369)
Q Consensus 288 ~l~~sp~d~~~l~s~s~D~-----~i~vwd~~~~~~~~~~~g~-~~~-~~~~~~~d~~~l~sgs~d-------------- 346 (369)
.+.+ ++++++.|+.++ .+.++|+.+.+-...-.-. .+. .... ..++.+++.|+.+
T Consensus 192 ~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~ 267 (315)
T 4asc_A 192 ATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATLETESGELVPTEL 267 (315)
T ss_dssp EEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EEEE---CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE-EECCEEEEECCccccCcCCcccccccc
Confidence 3333 557778887654 5788888775332221100 100 0111 1266776666653
Q ss_pred CcEEEEECCCCc
Q 017601 347 GSIFVADVVAKE 358 (369)
Q Consensus 347 g~I~iWd~~~~~ 358 (369)
..|.+||.++.+
T Consensus 268 ~~v~~yd~~~~~ 279 (315)
T 4asc_A 268 NDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEETTTTE
T ss_pred CcEEEecCCCCh
Confidence 247788887653
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.89 E-value=3.4 Score=36.20 Aligned_cols=131 Identities=11% Similarity=-0.014 Sum_probs=67.5
Q ss_pred CeEEEEeCCcccCCceee--eeeccCCCcEEEEEECCCC-cEEEEeCC-----CcEEEEeCCCc--eeeeeccccccCce
Q 017601 217 CQLTIWDLRMKENGGCLH--RICGSVGDILYAVCSSSTG-NIAVAGAD-----RTVTIYDPRRW--SALSRWVHCSKYEI 286 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~--~~~~~~~~~v~~v~~sp~g-~lasgs~D-----~~v~vwD~~~~--~~~~~~~~h~~~~v 286 (369)
..+.+||..+. +... .+... ...-.++.+ ++ .++.|+.+ ..+.+||+.+. +.+..+... ...-
T Consensus 137 ~~~~~yd~~~~---~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~ 209 (308)
T 1zgk_A 137 NSVERYEPERD---EWHLVAPMLTR-RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI-RSGA 209 (308)
T ss_dssp CCEEEEETTTT---EEEECCCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-CBSC
T ss_pred ccEEEECCCCC---eEeECCCCCcc-ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-cccc
Confidence 46888998865 2221 11111 112222333 56 66666654 46889998774 333333322 2222
Q ss_pred EEEEEcCCCCCEEEEEECC-----CeEEEEECcCCceeEEEEcCC-Ce-eeeeEcCCCCEEEEEeCC-----CcEEEEEC
Q 017601 287 TGLSFSSIDSNYIYVQGVD-----YEVFCGQWRESSKVFAFRGDS-NW-LGFSKCSNRDVLGGWSDS-----GSIFVADV 354 (369)
Q Consensus 287 ~~l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~g~~-~~-~~~~~~~d~~~l~sgs~d-----g~I~iWd~ 354 (369)
..+.+ ++.+++.|+.+ ..+.+||+.+.+-...-.-.. +. .... ..++.+++.|+.+ ..+.+||.
T Consensus 210 ~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 210 GVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT-VHQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp EEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEET
T ss_pred eEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE-EECCEEEEEcCcCCCcccceEEEEcC
Confidence 33333 45777777765 568899988753322110000 00 1111 1266777777644 45788888
Q ss_pred CCCc
Q 017601 355 VAKE 358 (369)
Q Consensus 355 ~~~~ 358 (369)
++.+
T Consensus 286 ~~~~ 289 (308)
T 1zgk_A 286 DTDT 289 (308)
T ss_dssp TTTE
T ss_pred CCCE
Confidence 7653
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.56 E-value=4.3 Score=34.31 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=71.7
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCc---eeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeecccccc
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGG---CLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSK 283 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~---~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~ 283 (369)
..|+.+.+| +++.=-+..+.+.. ...++-...=..+..++|+|+| +.++ .+|.+.-.+..+... ..+.+. .
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-~~W~~s-~ 79 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-DNWMGR-A 79 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-CCHHHH-C
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCc-cccccc-c
Confidence 456667777 65554444332101 1222222101467799999999 4455 677666666544221 111111 1
Q ss_pred Cc--------eEEEEEcCCCCCEEEEEECCCeEEEEECcCCcee-----EEEEcCCCeeee---eEcCCCCEEEEEeCCC
Q 017601 284 YE--------ITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKV-----FAFRGDSNWLGF---SKCSNRDVLGGWSDSG 347 (369)
Q Consensus 284 ~~--------v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~-----~~~~g~~~~~~~---~~~~d~~~l~sgs~dg 347 (369)
.. -.++.|.| +|.+.++ .|+.|+-++-.+.... ...-+...|..+ ...++|.+.+.. |+
T Consensus 80 t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 12 37899999 9988877 6699988876431110 111222233333 335677666555 77
Q ss_pred cEEEEE
Q 017601 348 SIFVAD 353 (369)
Q Consensus 348 ~I~iWd 353 (369)
.++-+.
T Consensus 155 ~lyr~~ 160 (236)
T 1tl2_A 155 QFYKAL 160 (236)
T ss_dssp EEEEEC
T ss_pred cEEecC
Confidence 765443
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.36 E-value=8.7 Score=34.59 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=56.0
Q ss_pred CCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeeee--ccCCCcEEEEEECCC----CcEE-EEeCC--
Q 017601 191 YPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRIC--GSVGDILYAVCSSST----GNIA-VAGAD-- 261 (369)
Q Consensus 191 ~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~--~~~~~~v~~v~~sp~----g~la-sgs~D-- 261 (369)
.|..+.+. +++ .++.+..++.|.+++ .++ ...+..+. .........|+|+|+ +.|. +-...
T Consensus 32 ~P~~ia~~------pdG-~l~V~e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 32 VPWALAFL------PDG-GMLIAERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp CEEEEEEC------TTS-CEEEEETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred CceEEEEc------CCC-eEEEEeCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 44555554 344 466666679999998 331 12222221 111356889999998 4433 33322
Q ss_pred ---CcEEEEeCCCc-----eee-eecc---ccccCceEEEEEcCCCCCEEEEEE
Q 017601 262 ---RTVTIYDPRRW-----SAL-SRWV---HCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 262 ---~~v~vwD~~~~-----~~~-~~~~---~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
+.|..|+.... +.+ ..+. +. ......++|.| ||.+.++.+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~-~h~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 102 GLRNQVVRLRHLGERGVLDRVVLDGIPARPHG-LHSGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp SSEEEEEEEEECSSCEEEEEEEEEEECCCTTC-CCCCCCEEECT-TSCEEEECC
T ss_pred CCccEEEEEEeCCCCcCceEEEEEeCCCCCCC-CcCCceEEECC-CCCEEEEEC
Confidence 56777887643 112 2233 11 11346899999 998777754
No 320
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.29 E-value=8.7 Score=33.67 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=53.0
Q ss_pred CCC-cEEEEeC------CCcEEEEeCCCc--eeeeeccccccCceEEEEEcCCCCCEEEEEECC-----CeEEEEECcCC
Q 017601 251 STG-NIAVAGA------DRTVTIYDPRRW--SALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD-----YEVFCGQWRES 316 (369)
Q Consensus 251 p~g-~lasgs~------D~~v~vwD~~~~--~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~ 316 (369)
.++ .++.|+. -..+.+||+.+. +.+..+... ...-..+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP-RSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC-cccceEEEE---CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 356 6666653 245899998874 444333322 222223332 55777777754 35678888775
Q ss_pred ceeEE--EEcCCCeeeeeEcCCCCEEEEEeCC--------------CcEEEEECCCCc
Q 017601 317 SKVFA--FRGDSNWLGFSKCSNRDVLGGWSDS--------------GSIFVADVVAKE 358 (369)
Q Consensus 317 ~~~~~--~~g~~~~~~~~~~~d~~~l~sgs~d--------------g~I~iWd~~~~~ 358 (369)
+-... +.......... ..++.+++.|+.+ ..+.+||.++.+
T Consensus 233 ~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 233 KWEVMTEFPQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CEEECCCCSSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred eEEECCCCCCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 32221 11000000111 1256666666543 457888887653
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.24 E-value=10 Score=34.17 Aligned_cols=194 Identities=9% Similarity=0.107 Sum_probs=112.3
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCce
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~ 232 (369)
+.-.+|. ..++|.- . ..++.+||++...+ ++...-+..+.|..|.. . ..++--.+..|.-|++.... .+
T Consensus 71 sAIMnP~-~~ViALr-a-g~~LQiFnletK~k-lks~~~~e~VvfWkWis----~-~~L~lVT~taVyHWs~~~~s--~P 139 (365)
T 2xzh_A 71 SAIMNPA-SKVIALK-A-GKTLQIFNIEMKSK-MKAHTMTDDVTFWKWIS----L-NTVALVTDNAVYHWSMEGES--QP 139 (365)
T ss_dssp EEEECSS-SSEEEEE-E-TTEEEEEETTTTEE-EEEEECSSCEEEEEECS----S-SEEEEEESSEEEEEESSTTC--CC
T ss_pred eeeeCCC-ccEEEEe-c-CCeEEEechHHhhh-hcceecCCccEEEEecC----C-CeEEEEcCCcEEEEcccCCC--CC
Confidence 4667894 4577775 3 68899999975433 34444567788888843 2 44443345689999997532 56
Q ss_pred eeeeeccC---CCcEEEEEECCCC-cE-EEEe------CCCcEEEEeCCCceeeeeccccccCceEEEEEcCC-CCC-EE
Q 017601 233 LHRICGSV---GDILYAVCSSSTG-NI-AVAG------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI-DSN-YI 299 (369)
Q Consensus 233 ~~~~~~~~---~~~v~~v~~sp~g-~l-asgs------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~-d~~-~l 299 (369)
++.+..+. +..|-...-+++. ++ ++|- -.|.+.+|..+++ ..+.+.|| ...-..+.+... ... ++
T Consensus 140 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh-aa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 140 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH-AASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS-EEEEEEECCTTCSSCEEEE
T ss_pred ceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeee-eeeeEEEecCCCCCCceEE
Confidence 66665432 4667777788888 44 3332 2467889987753 44566777 433333322110 112 22
Q ss_pred EEEEC---CCeEEEEECcCC---c------eeEEEEcCC---Ce-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 300 YVQGV---DYEVFCGQWRES---S------KVFAFRGDS---NW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 300 ~s~s~---D~~i~vwd~~~~---~------~~~~~~g~~---~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+-+.. -+.+++-++... . ....+-... .+ ..+..+.--.+++--+.-|.|+++|++++..
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE
Confidence 32222 147888888432 1 111111110 00 1111233456788899999999999999864
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.98 E-value=3.9 Score=35.87 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=66.5
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCC-----CcEEEEeCCCc--eeeeeccccccCceEE
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGAD-----RTVTIYDPRRW--SALSRWVHCSKYEITG 288 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D-----~~v~vwD~~~~--~~~~~~~~h~~~~v~~ 288 (369)
..+.+||..+.. ...+..+... .....++.+ ++ .++.|+.+ ..+.+||+.+. +.+..+... ...-..
T Consensus 90 ~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~ 164 (308)
T 1zgk_A 90 SALDCYNPMTNQ-WSPCAPMSVP-RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR-RIGVGV 164 (308)
T ss_dssp CCEEEEETTTTE-EEECCCCSSC-CBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC-CBSCEE
T ss_pred ceEEEECCCCCe-EeECCCCCcC-ccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc-ccceEE
Confidence 468889988651 0111111111 122222333 56 66666643 46889998774 334333322 222233
Q ss_pred EEEcCCCCCEEEEEECC-----CeEEEEECcCCceeEE--EEcCCCeeeeeEcCCCCEEEEEeCC-----CcEEEEECCC
Q 017601 289 LSFSSIDSNYIYVQGVD-----YEVFCGQWRESSKVFA--FRGDSNWLGFSKCSNRDVLGGWSDS-----GSIFVADVVA 356 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~D-----~~i~vwd~~~~~~~~~--~~g~~~~~~~~~~~d~~~l~sgs~d-----g~I~iWd~~~ 356 (369)
+.+ ++.+++.|+.+ ..+.++|+.+.+-... +.......... ..++.+++.|+.+ ..+.+||+++
T Consensus 165 ~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 165 AVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVC-VLHNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEE-EECCEEEEEeCCCCCCccceEEEEeCCC
Confidence 333 45677777765 4588888876432211 10000001111 1166676666654 5688999876
Q ss_pred Cc
Q 017601 357 KE 358 (369)
Q Consensus 357 ~~ 358 (369)
.+
T Consensus 241 ~~ 242 (308)
T 1zgk_A 241 ET 242 (308)
T ss_dssp TE
T ss_pred Cc
Confidence 53
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.02 E-value=11 Score=32.92 Aligned_cols=182 Identities=12% Similarity=0.007 Sum_probs=86.4
Q ss_pred eeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEc----C-------CeEEEEeCCcccCC
Q 017601 162 SMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTE----G-------CQLTIWDLRMKENG 230 (369)
Q Consensus 162 ~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~----d-------~~v~iwD~~~~~~~ 230 (369)
.+++.+ + ..+..||.............+..-....... .++..++.++. + ..+..||..+.
T Consensus 6 ~l~~~G-G--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (315)
T 4asc_A 6 LIFMIS-E--EGAVAYDPAANECYCASLSSQVPKNHVSLVT--KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--- 77 (315)
T ss_dssp EEEEEE-T--TEEEEEETTTTEEEEEECCCCSCSSEEEEEC--TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT---
T ss_pred EEEEEc-C--CceEEECCCCCeEecCCCCCCCCccceEEEE--ECCEEEEEcCcccCCCCCccccccceEEecCCCC---
Confidence 455555 4 5788999875544332221111111111001 13445666662 1 13778898875
Q ss_pred ceee--eeeccCCCcEEEEEECCCC-cEEEEeCC--------CcEEEEeCCC--ceeeeeccccccCceEEEEEcCCCCC
Q 017601 231 GCLH--RICGSVGDILYAVCSSSTG-NIAVAGAD--------RTVTIYDPRR--WSALSRWVHCSKYEITGLSFSSIDSN 297 (369)
Q Consensus 231 ~~~~--~~~~~~~~~v~~v~~sp~g-~lasgs~D--------~~v~vwD~~~--~~~~~~~~~h~~~~v~~l~~sp~d~~ 297 (369)
+... .+... .....++.+ ++ .++.|+.+ ..+.+||+.+ ++.+..+... ...-..+.+ +++
T Consensus 78 ~W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~ 150 (315)
T 4asc_A 78 EWLGMPPLPSP-RCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTVLSH---MDL 150 (315)
T ss_dssp EEEECCCBSSC-EESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEE---TTE
T ss_pred eEEECCCCCcc-hhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeEEEE---CCE
Confidence 2211 11111 011112222 55 66666632 4688999887 4444443322 222223332 557
Q ss_pred EEEEEEC-C-----CeEEEEECcCCceeEEEEc-CCCeeeeeEcCCCCEEEEEeCCC-----cEEEEECCCCc
Q 017601 298 YIYVQGV-D-----YEVFCGQWRESSKVFAFRG-DSNWLGFSKCSNRDVLGGWSDSG-----SIFVADVVAKE 358 (369)
Q Consensus 298 ~l~s~s~-D-----~~i~vwd~~~~~~~~~~~g-~~~~~~~~~~~d~~~l~sgs~dg-----~I~iWd~~~~~ 358 (369)
+++.|+. + ..+.++|..+.+-...-.- ..+........++.+++.|+.++ .+.+||.++.+
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 7777776 2 4688888877532211100 00000001112667766666554 57888887653
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=87.76 E-value=28 Score=37.82 Aligned_cols=192 Identities=9% Similarity=0.139 Sum_probs=106.1
Q ss_pred EEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCcee
Q 017601 154 LCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCL 233 (369)
Q Consensus 154 l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~ 233 (369)
.-.+|. ..++|.- . ..++.|||++...+ +....-+..+.|..|.. + ..++--.+..|.-|++.... .++
T Consensus 71 AIMnP~-~~iiALr-a-g~~lQiFnl~~k~k-lks~~~~e~VvfWkWis--~---~~l~lVT~~aVyHW~~~~~s--~P~ 139 (1630)
T 1xi4_A 71 AIMNPA-SKVIALK-A-GKTLQIFNIEMKSK-MKAHTMTDDVTFWKWIS--L---NTVALVTDNAVYHWSMEGES--QPV 139 (1630)
T ss_pred hccCCC-cceEEEe-c-CCeEEEeehHHhhh-hcccccCCCceEEEecC--C---CeeEEEcCCeEEEeccCCCC--ccH
Confidence 557884 4577765 3 68999999863321 22333445677888743 2 34443345679999996422 455
Q ss_pred eeeeccC---CCcEEEEEECCCC-cEE-EEe------CCCcEEEEeCCCceeeeeccccccCceEEEEEc--CCCCCEEE
Q 017601 234 HRICGSV---GDILYAVCSSSTG-NIA-VAG------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFS--SIDSNYIY 300 (369)
Q Consensus 234 ~~~~~~~---~~~v~~v~~sp~g-~la-sgs------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~s--p~d~~~l~ 300 (369)
+.+..+. +..|-.-.-+++. +++ +|= -.|.+.+|...++ ..+.+.|| ...-..+... + .+..|.
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegh-a~~F~~~~~~~~~-~~~~l~ 216 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH-AASFAQFKMEGNA-EESTLF 216 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHh-HhhhheeccCCCC-CCceEE
Confidence 4444321 3556666778888 443 332 3578889987653 33455666 4433333321 2 122222
Q ss_pred E-EEC---CCeEEEEECcCC---ceeE------EEEcCC---Ce-eeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 301 V-QGV---DYEVFCGQWRES---SKVF------AFRGDS---NW-LGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 301 s-~s~---D~~i~vwd~~~~---~~~~------~~~g~~---~~-~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+ +.. .+.+.|-++... ...+ .+.... .+ ..+..++.-.+++-.+.-|.|.++|+.|+..
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh
Confidence 2 211 257888887542 1111 111110 00 1111133456788889999999999999864
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.76 E-value=35 Score=36.19 Aligned_cols=134 Identities=13% Similarity=0.181 Sum_probs=75.3
Q ss_pred CCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCC
Q 017601 216 GCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSID 295 (369)
Q Consensus 216 d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d 295 (369)
.|.|.+|++..+ +.+.++..... +++++++-- +|+|++|- ..+|++||+...+.+..-..+ -..|..+.... .
T Consensus 863 ~Gri~vf~v~~~-kL~lv~~~~v~--g~v~al~~~-~g~Lla~i-g~~l~vy~l~~~~~L~~~~~~-~~~i~~~~l~~-~ 935 (1158)
T 3ei3_A 863 QGRIVVFQYSDG-KLQTVAEKEVK--GAVYSMVEF-NGKLLASI-NSTVRLYEWTTEKELRTECNH-YNNIMALYLKT-K 935 (1158)
T ss_dssp CEEEEEEEEETT-EEEEEEEEEES--SCEEEEEEE-TTEEEEEE-TTEEEEEEECTTSCEEEEEEE-CCCSCEEEEEE-E
T ss_pred ceEEEEEEEECC-EEEEEEEEEcC--CcCEEEeee-CCEEEEEc-CCEEEEEECCCCceEEEEeec-cccEEEEEEec-c
Confidence 368999998632 22334433344 889998632 35555544 478999999865544311111 11233333333 4
Q ss_pred CCEEEEEECCCeEEEEECcCC-ceeEEEEc--CCCeeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 296 SNYIYVQGVDYEVFCGQWRES-SKVFAFRG--DSNWLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 296 ~~~l~s~s~D~~i~vwd~~~~-~~~~~~~g--~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
+++++.|..-..|.+...+.. ..+..+.. +.+|..-...-+...++.+..+|.|.+.....
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred CCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 578888877666666555432 22222222 33333222122556888899999999987654
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.20 E-value=8 Score=37.44 Aligned_cols=122 Identities=13% Similarity=-0.018 Sum_probs=72.8
Q ss_pred eEEEEeCCcccC--CceeeeeeccCCCcEEEEEECCCC--cEEEEeCCCcEEEEeCCCcee-------------eeeccc
Q 017601 218 QLTIWDLRMKEN--GGCLHRICGSVGDILYAVCSSSTG--NIAVAGADRTVTIYDPRRWSA-------------LSRWVH 280 (369)
Q Consensus 218 ~v~iwD~~~~~~--~~~~~~~~~~~~~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~~~-------------~~~~~~ 280 (369)
.|.+-|.+.... ...+..+... ...-.+.++||| .+++|--+.+|.|+|+++... .....
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~p--ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e- 375 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVP--KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE- 375 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEES--SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-
T ss_pred CeeEEccccccccCCceEEEEeCC--CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-
Confidence 466777765110 0222333333 445568899999 455566799999999985211 11222
Q ss_pred cccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC----------ceeEEEEcCCCeeeee------EcCCCCEEEEEe
Q 017601 281 CSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES----------SKVFAFRGDSNWLGFS------KCSNRDVLGGWS 344 (369)
Q Consensus 281 h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~----------~~~~~~~g~~~~~~~~------~~~d~~~l~sgs 344 (369)
+.-.-...+|.+ +|....|--.|..|--|++... ..+..+.-|-...... .-+||++|++..
T Consensus 376 -~GlGPlHt~Fd~-~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 376 -LGLGPLHTTFDG-RGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp -CCSCEEEEEECS-SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred -CCCcccEEEECC-CCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 123467899999 9966666678999999999752 3444454332111111 134788888765
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.17 E-value=21 Score=31.17 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=52.4
Q ss_pred CC-cEEEEeCC-------CcEEEEeCCC--ceeeeeccccccCceEEEEEcCCCCCEEEEEECC------CeEEEEECcC
Q 017601 252 TG-NIAVAGAD-------RTVTIYDPRR--WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVD------YEVFCGQWRE 315 (369)
Q Consensus 252 ~g-~lasgs~D-------~~v~vwD~~~--~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D------~~i~vwd~~~ 315 (369)
++ .++.|+.+ ..+.+||+.+ ++.+..+... ...-..+. . ++.+++.|+.+ ..+.++|..+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYGHNVIS--H-NGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EESCEEEE--E-TTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccccEEEE--E-CCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 56 66667654 3578899886 3444333322 11112222 2 56777777642 3588899887
Q ss_pred CceeEEEEc-CCCe-eeeeEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 017601 316 SSKVFAFRG-DSNW-LGFSKCSNRDVLGGWSDS-----GSIFVADVVAKE 358 (369)
Q Consensus 316 ~~~~~~~~g-~~~~-~~~~~~~d~~~l~sgs~d-----g~I~iWd~~~~~ 358 (369)
.+-...-.- ..+. .... ..++.+++.|+.+ ..+.+||.++.+
T Consensus 185 ~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 185 GDWKDLAPMKTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TEEEEECCCSSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CEEEECCCCCCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 543222110 0100 1111 1266666666543 356788887653
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.97 E-value=1.6 Score=39.46 Aligned_cols=107 Identities=6% Similarity=-0.068 Sum_probs=65.5
Q ss_pred CcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEc--CCCCCEEEEE-ECCCeEEEEECcCCceeEEEEcCCCe-
Q 017601 253 GNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFS--SIDSNYIYVQ-GVDYEVFCGQWRESSKVFAFRGDSNW- 328 (369)
Q Consensus 253 g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~s--p~d~~~l~s~-s~D~~i~vwd~~~~~~~~~~~g~~~~- 328 (369)
+.++.++.||.|.-+|..+|+.+-++......++....-. +.++..++.. ..||.+..+|..++.....+.-..-.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 3788999999999999999988766653201233222111 1122333333 57999999998877544433211100
Q ss_pred -eeeeE----c-------CCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 329 -LGFSK----C-------SNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 329 -~~~~~----~-------~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
..+.. . ..+..++.|+.+|.++..|+++|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 01110 0 1466889999999999999988864
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=82.17 E-value=33 Score=32.14 Aligned_cols=194 Identities=9% Similarity=0.098 Sum_probs=112.6
Q ss_pred EEEECCCCceeEEEEecccceEEEEeCCcceEEEEeeeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCce
Q 017601 153 GLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGC 232 (369)
Q Consensus 153 ~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~ 232 (369)
+.-.+|. ..++|.- . ..++.|||++...+ ++.+.-+..+.|..|.. ...++--.+..|.-|++.... .+
T Consensus 70 sAIMnP~-~~iiALr-a-g~~lQiFnle~K~k-lks~~~~e~VvfWkWis-----~~~l~lVT~taVyHWsi~~~s--~P 138 (494)
T 1bpo_A 70 SAIMNPA-SKVIALK-A-GKTLQIFNIEMKSK-MKAHTMTDDVTFWKWIS-----LNTVALVTDNAVYHWSMEGES--QP 138 (494)
T ss_dssp EEEECSS-SSCEEEE-E-TTEEEEEETTTTEE-EEEEECSSCCCEEEEEE-----TTEEEEECSSEEEEEESSSSC--CC
T ss_pred eeeeCCC-CcEEEEe-c-CCeEEEEchHHhhh-hcceecCCCceEEEecC-----CCeEEEEcCCeeEEecccCCC--Cc
Confidence 4668884 4577775 3 68999999975332 33344455677777642 244444445689999997532 56
Q ss_pred eeeeeccC---CCcEEEEEECCCC-cEE-EEe------CCCcEEEEeCCCceeeeeccccccCceEEEEEcCC-CC-CEE
Q 017601 233 LHRICGSV---GDILYAVCSSSTG-NIA-VAG------ADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSI-DS-NYI 299 (369)
Q Consensus 233 ~~~~~~~~---~~~v~~v~~sp~g-~la-sgs------~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~-d~-~~l 299 (369)
++.+..+. +..|-...-+++. +++ +|- -.|.+.+|..+++ ..+.+.|| ...-..+.+... .+ ..+
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh-aa~F~~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH-AASFAQFKMEGNAEESTLF 216 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCS-EEEEEEEECTTCSSEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheee-eeeeEEEecCCCCCCceEE
Confidence 66665432 4667777788988 443 332 2467889987753 44566777 444433333220 11 223
Q ss_pred EEEECC---CeEEEEECcCC---ce------eEEEEcCC---C-eeeeeEcCCCCEEEEEeCCCcEEEEECCCCcc
Q 017601 300 YVQGVD---YEVFCGQWRES---SK------VFAFRGDS---N-WLGFSKCSNRDVLGGWSDSGSIFVADVVAKEN 359 (369)
Q Consensus 300 ~s~s~D---~~i~vwd~~~~---~~------~~~~~g~~---~-~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~~~ 359 (369)
+-+... +.++|-++... .. ...+-... . -..+..+..-.+++--+.-|.|+++|++++..
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 333332 67888888542 11 11110000 0 01122233556888899999999999999864
No 330
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=81.86 E-value=28 Score=31.13 Aligned_cols=58 Identities=7% Similarity=-0.007 Sum_probs=31.6
Q ss_pred ceEEEEEcC------CCCCEEEEEECCCeEEEEECcCCceeEE--E-Ec-CCCeeeeeEcCCCCEEEE
Q 017601 285 EITGLSFSS------IDSNYIYVQGVDYEVFCGQWRESSKVFA--F-RG-DSNWLGFSKCSNRDVLGG 342 (369)
Q Consensus 285 ~v~~l~~sp------~d~~~l~s~s~D~~i~vwd~~~~~~~~~--~-~g-~~~~~~~~~~~d~~~l~s 342 (369)
....+.|.. .++.++++.-..+.|...++..++.... + .+ ..+...+...+||.+.++
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 339 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVL 339 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEE
Confidence 466777753 1466666665677787777775433221 2 11 112244555567776554
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=78.82 E-value=5.7 Score=33.55 Aligned_cols=97 Identities=11% Similarity=0.028 Sum_probs=53.3
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCce---eeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeee-----e
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGC---LHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALS-----R 277 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~---~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~-----~ 277 (369)
++.|.++ .++.+.-.+..+...... -..+-...-....++.|.|+| +.++ .||.|.-++..+...-. +
T Consensus 51 ~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~ 127 (236)
T 1tl2_A 51 GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARAT 127 (236)
T ss_dssp TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSE
T ss_pred CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecccc
Confidence 3466666 777766666544211110 011110000124788999999 5555 56988877764321111 1
Q ss_pred c-cccccCceEEEEEcCCCCCEEEEEECCCeEE
Q 017601 278 W-VHCSKYEITGLSFSSIDSNYIYVQGVDYEVF 309 (369)
Q Consensus 278 ~-~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~ 309 (369)
. -.+--..+..|.|.| +|.+.+.. |+.++
T Consensus 128 ~vg~~gw~~~~~lff~p-~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 128 EVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFY 157 (236)
T ss_dssp EEECSSGGGEEEEEECT-TSCEEEEE--TTEEE
T ss_pred EeccCCCCceEEEEECC-CceEEEEe--CCcEE
Confidence 1 111014689999999 99887776 77754
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.67 E-value=22 Score=35.28 Aligned_cols=138 Identities=14% Similarity=0.216 Sum_probs=70.9
Q ss_pred CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCC--cEEEEeCCCc--eeeee---ccccccCceEE
Q 017601 217 CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADR--TVTIYDPRRW--SALSR---WVHCSKYEITG 288 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~--~v~vwD~~~~--~~~~~---~~~h~~~~v~~ 288 (369)
..+.+||..+.. ...+..+... ...- +++.-.++ .++.|+.++ .+.+||+.+. +.+.. +... ...-.+
T Consensus 468 ~dv~~yd~~t~~-W~~~~~~p~~-R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-r~~~~a 543 (695)
T 2zwa_A 468 SDNWIFDMKTRE-WSMIKSLSHT-RFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQN-SLVSAG 543 (695)
T ss_dssp CCCEEEETTTTE-EEECCCCSBC-CBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGS-CCBSCE
T ss_pred ccEEEEeCCCCc-EEECCCCCCC-cccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCc-ccceeE
Confidence 357889988751 0111111111 1112 22332366 777777654 7899999874 33332 2222 223344
Q ss_pred EEEcCCCCCEEEEEEC--C-----CeEEEEECcCCc------eeEEEEc--CCCe-eeeeEcCCCCEEEEEeC-------
Q 017601 289 LSFSSIDSNYIYVQGV--D-----YEVFCGQWRESS------KVFAFRG--DSNW-LGFSKCSNRDVLGGWSD------- 345 (369)
Q Consensus 289 l~~sp~d~~~l~s~s~--D-----~~i~vwd~~~~~------~~~~~~g--~~~~-~~~~~~~d~~~l~sgs~------- 345 (369)
+.+...++.+++.||. + +.+.+||+.+.. -...-.. ..+. .......++.+++.|+.
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCC
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCC
Confidence 5556523667777776 2 458899988766 1111110 1111 11111223777777764
Q ss_pred -CCcEEEEECCCCc
Q 017601 346 -SGSIFVADVVAKE 358 (369)
Q Consensus 346 -dg~I~iWd~~~~~ 358 (369)
...|.+||..+.+
T Consensus 624 ~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 624 RTNSIISLDPLSET 637 (695)
T ss_dssp TTTSEEEEETTTTE
T ss_pred CCCeEEEEECCCCe
Confidence 3568899988753
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.14 E-value=48 Score=30.95 Aligned_cols=66 Identities=8% Similarity=0.135 Sum_probs=34.0
Q ss_pred eeeEEEEeecCCCCceEEEEEecCC-cEEEEEecCCCCCCccccccccCCC-CCCCCCCeeEEEECCC---CceeEEEE
Q 017601 94 EVQSIALAETDSSGYMVLGSVDSYG-HLIVSKLDTSGKDVDRLTYSVLPQD-CGVGEGSWSGLCFSPS---QWSMAAVA 167 (369)
Q Consensus 94 ~V~~l~~s~~~~~~~~~las~d~~g-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~---~~~~~a~~ 167 (369)
.-+.|+|.|++ .++++ +..| +|++++...+.. .. ...+.... ...+++|..+++|+|+ +..++++-
T Consensus 28 ~P~~~a~~pdG----~l~V~-e~~gg~I~~~~~~~g~~--~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 28 KPHALLWGPDN----QIWLT-ERATGKILRVNPESGSV--KT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SEEEEEECTTS----CEEEE-ETTTCEEEEECTTTCCE--EE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCC----cEEEE-EcCCCEEEEEECCCCcE--eE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 44689999984 34443 5554 688776432210 00 00111100 1124667889999995 44444443
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=75.52 E-value=46 Score=29.92 Aligned_cols=59 Identities=20% Similarity=0.208 Sum_probs=32.9
Q ss_pred ceeeEEEEeecCCCCceEEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCC
Q 017601 93 SEVQSIALAETDSSGYMVLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPS 159 (369)
Q Consensus 93 ~~V~~l~~s~~~~~~~~~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 159 (369)
..-+.|+|.||+ .++++--..|+|++++...+.. ......+.....++.+-.+++|+|+
T Consensus 32 ~~P~~ia~~pdG----~llVter~~G~I~~v~~~~g~~----~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 32 NSPWGLAPLPGG----DLLVSSRDEATITRVDAKTGRK----TELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SSEEEEEECTTS----CEEEEETTTCEEEEECTTTCCE----EEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCceEEEEcCCC----cEEEEEecCCEEEEEECCCCcE----eeecccCceeecCCCCceeeEeccc
Confidence 344789999984 4555443488998876432210 0111011112234566779999995
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=75.15 E-value=46 Score=32.29 Aligned_cols=100 Identities=10% Similarity=0.006 Sum_probs=63.4
Q ss_pred CCCCCcEEEEEc-CCeEEEEeCCccc----------CCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCC
Q 017601 204 VNGGPNMLAVTE-GCQLTIWDLRMKE----------NGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRR 271 (369)
Q Consensus 204 ~~~~~~lla~s~-d~~v~iwD~~~~~----------~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~ 271 (369)
+|||.++++.+. +.++.++|++.-. +...+..... +-...-.+|.++| ...+---|..|.-|++..
T Consensus 331 sPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~--GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 331 SSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL--GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC--CSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC--CCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 357777777664 7899999998421 0111222332 3455668899999 566666899999999875
Q ss_pred c----------eeeeeccccccCceEEEEE------cCCCCCEEEEE---ECCCeE
Q 017601 272 W----------SALSRWVHCSKYEITGLSF------SSIDSNYIYVQ---GVDYEV 308 (369)
Q Consensus 272 ~----------~~~~~~~~h~~~~v~~l~~------sp~d~~~l~s~---s~D~~i 308 (369)
. ..+..+.-| +.+-.+.- .| ||++|++. |.|+.+
T Consensus 409 a~~~~~g~~~~~v~~k~dv~--YqpGH~~~~~get~~~-dGk~lv~lnK~skdrfl 461 (638)
T 3sbq_A 409 AVRAYKGEKVNYIKQKLDVH--YQPGHLHASLCETNEA-DGKWLVALSKFSKDRFL 461 (638)
T ss_dssp HHHHHTTCCCCCEEEEEECS--SCEEEEEETTTTSTTC-CSCEEEEEESCCTTSSC
T ss_pred HHHHhcCccCCeeeeccccc--cCCcccccCCCccCCC-CccEEEEecccccccCc
Confidence 3 344455544 33333433 46 89999886 457666
No 336
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=75.02 E-value=46 Score=29.72 Aligned_cols=107 Identities=16% Similarity=0.099 Sum_probs=54.7
Q ss_pred eeCCcceeeeccCCCCCCCCcEEEEEcCCeEEEEeCCcccCCceeeee---eccCCCcEEEEEECCC----CcEEEE-eC
Q 017601 189 LWYPSSLNFVQNLSPVNGGPNMLAVTEGCQLTIWDLRMKENGGCLHRI---CGSVGDILYAVCSSST----GNIAVA-GA 260 (369)
Q Consensus 189 ~~~~~~v~~~~~~~~~~~~~~lla~s~d~~v~iwD~~~~~~~~~~~~~---~~~~~~~v~~v~~sp~----g~lasg-s~ 260 (369)
+.+|..+.+.. ++..++.+...+.|+++|..... ...+..+ ..........++|+|+ +.|... +.
T Consensus 17 l~~P~~i~~~p------dG~~l~V~e~~G~i~~~~~~g~~-~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 17 LDHPWALAFLP------DNHGMLITLRGGELRHWQAGKGL-SAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp ESSEEEEEECS------TTCCEEEEETTTEEEEEETTTEE-CCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCcEEEEEcC------CCCEEEEEeCCceEEEEeCCCce-eeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 33555565553 44426666678999999853221 0111111 1111256789999995 533332 22
Q ss_pred -------CCcEEEEeCCCc-------eee-eeccc---cccCceEEEEEcCCCCCEEEEEEC
Q 017601 261 -------DRTVTIYDPRRW-------SAL-SRWVH---CSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 261 -------D~~v~vwD~~~~-------~~~-~~~~~---h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
...|..|++... +.+ ..+.. . ...-..+.|.| ||.+.++.+.
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~-~h~~~~l~~~p-dG~Lyv~~Gd 149 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTG-NHFGGRLVFDG-KGYLFIALGE 149 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSS-SCCCCCEEECS-SSEEEEEECC
T ss_pred CCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCC-cccCccEEECC-CCcEEEEECC
Confidence 234655665432 111 11211 1 11236799999 9977666543
No 337
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=74.34 E-value=94 Score=32.97 Aligned_cols=132 Identities=10% Similarity=-0.027 Sum_probs=74.6
Q ss_pred eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCC--
Q 017601 218 QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSID-- 295 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d-- 295 (369)
.|++.+.... ..+..+....+..|...+.+. .+++.++ .+.+.++++..++....-......+|.++++.|..
T Consensus 493 ~Irli~~~~~---~~~~~w~~p~~~~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 493 SVRLVSQEPK---ALVSEWKEPQAKNISVASCNS-SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDS 567 (1158)
T ss_dssp CEEEEESSSC---CEEEEECCTTCCCCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSS
T ss_pred EEEEEECCCC---eEEEEEECCCCCEEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCC
Confidence 3455554433 344445433134566665543 2444444 56777777765433221111125689999998721
Q ss_pred ---CCEEEEEEC-CCeEEEEECcCCceeEEEE--cCCCeeeeeE--cCCCCEEEEEeCCCcEEEEEC
Q 017601 296 ---SNYIYVQGV-DYEVFCGQWRESSKVFAFR--GDSNWLGFSK--CSNRDVLGGWSDSGSIFVADV 354 (369)
Q Consensus 296 ---~~~l~s~s~-D~~i~vwd~~~~~~~~~~~--g~~~~~~~~~--~~d~~~l~sgs~dg~I~iWd~ 354 (369)
+.+++.|.. |++++|+++..-+.+.... +......+.. .....+|..|-.||.+..+.+
T Consensus 568 ~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred cccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 368999997 9999999998755544332 1111011111 113457889999998866554
No 338
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.33 E-value=23 Score=36.68 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=32.4
Q ss_pred ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 285 EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
.+.++...+ +..++.+-+.|+++|+|++.++.++.+.
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 466777777 8889999999999999999999888876
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=70.03 E-value=56 Score=28.55 Aligned_cols=133 Identities=8% Similarity=0.006 Sum_probs=69.8
Q ss_pred CCCCcEEEEEcC--------------CeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEEe----CCCcEE
Q 017601 205 NGGPNMLAVTEG--------------CQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVAG----ADRTVT 265 (369)
Q Consensus 205 ~~~~~lla~s~d--------------~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs----~D~~v~ 265 (369)
+++..|.-+... ..|+..++... . ...+.. ... ..|++++ .|+-.. ....|.
T Consensus 62 ~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~---~-~~~l~~---~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 62 ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH---G-STVLDP---DPC--IYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp ECSSEEEEEEECC------CCSSCCSEEEEEEETTSC---C-CEEEEC---SCE--EEEEEETTEEEEEEESSSSCEEEE
T ss_pred EcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC---c-ceEeec---CCc--cEEEEeCCEEEEEeecCCCCceEE
Confidence 456677766542 35666666654 2 122221 222 2567788 665544 344555
Q ss_pred EEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEEC-CCeEEEEECcCCceeEEEEcCCCeeeeeEcCCCCEEEEEe
Q 017601 266 IYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGV-DYEVFCGQWRESSKVFAFRGDSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 266 vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~-D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~d~~~l~sgs 344 (369)
..++. +.....+..+ .. ..|+| +++.|+=.+. ...|..-++..+.....+.+.. .....|++.+|+=..
T Consensus 133 ~~~~d-Gs~~~~lt~~-~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~---~~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 133 RIRID-GEEKKKIKNH-YL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYDCNC---YKPVVLDDTNVYYMD 202 (302)
T ss_dssp EEETT-SCCCEEEESS-CC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEECSCE---EEEEEEETTEEEEEE
T ss_pred EEECC-CCCeEEEeCC-Cc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeCCCc---cceeeecCCEEEEEE
Confidence 55665 3344455544 22 45678 7888776655 5688888887765544454432 112235555555333
Q ss_pred CC--CcEEEEECCC
Q 017601 345 DS--GSIFVADVVA 356 (369)
Q Consensus 345 ~d--g~I~iWd~~~ 356 (369)
.+ ..|..-++..
T Consensus 203 ~~~~~~I~~~~ldG 216 (302)
T 3s25_A 203 VNRDNAIVHVNINN 216 (302)
T ss_dssp GGGTTEEEEECSSS
T ss_pred cCCCcEEEEEECCC
Confidence 22 2344444433
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=69.08 E-value=65 Score=28.91 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=59.1
Q ss_pred CcEEEEEECCCC-cEEEEeCCCcEEEEeCCCcee--eeec----cccccCceEEEEEcCCC----CCEEEEEE--CCCeE
Q 017601 242 DILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSA--LSRW----VHCSKYEITGLSFSSID----SNYIYVQG--VDYEV 308 (369)
Q Consensus 242 ~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~--~~~~----~~h~~~~v~~l~~sp~d----~~~l~s~s--~D~~i 308 (369)
...+.++|.|+| ++++--..|.|++++...++. +..+ ... ......|+|+| + +.+.++-+ .++.|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g-~~GllGia~~P-df~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSG-EGGLLGIALSP-DYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBT-TBSEEEEEECT-THHHHCEEEEEEECSSSEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecC-CCCceeeEecc-ccccCCEEEEEEecCCCCEE
Confidence 567899999999 555544489999998765443 2222 122 45689999999 5 44444322 45566
Q ss_pred EEEECcCC----------ceeE-EEE--cCCCeeeeeEcCCCCEEEEEe
Q 017601 309 FCGQWRES----------SKVF-AFR--GDSNWLGFSKCSNRDVLGGWS 344 (369)
Q Consensus 309 ~vwd~~~~----------~~~~-~~~--g~~~~~~~~~~~d~~~l~sgs 344 (369)
.-|.+..+ +.+. .+. +++....+...+||.+.++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 66665441 1111 121 122223455567888777754
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.34 E-value=20 Score=37.17 Aligned_cols=73 Identities=8% Similarity=-0.008 Sum_probs=45.6
Q ss_pred CcEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccc----cccCceEEEEEcCCCCCEEEEE---ECCCeEEEEEC
Q 017601 242 DILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVH----CSKYEITGLSFSSIDSNYIYVQ---GVDYEVFCGQW 313 (369)
Q Consensus 242 ~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~----h~~~~v~~l~~sp~d~~~l~s~---s~D~~i~vwd~ 313 (369)
..+.+++..++. ++.+-+.|+++|+|++.+++++.+..- ............|..+.++..- ..++..++|.+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~ 315 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKL 315 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEE
Confidence 456777777777 888999999999999999998776421 0011112223344344443332 23567778876
Q ss_pred c
Q 017601 314 R 314 (369)
Q Consensus 314 ~ 314 (369)
.
T Consensus 316 ~ 316 (950)
T 4gq2_M 316 N 316 (950)
T ss_dssp E
T ss_pred e
Confidence 4
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=67.65 E-value=99 Score=30.56 Aligned_cols=133 Identities=12% Similarity=0.077 Sum_probs=70.8
Q ss_pred CeEEEEeCCcccCCceeeee-e-----ccC-CCcEEEEEECCCC-cEEEEeCC------CcEEEEeCCC--ceeeeeccc
Q 017601 217 CQLTIWDLRMKENGGCLHRI-C-----GSV-GDILYAVCSSSTG-NIAVAGAD------RTVTIYDPRR--WSALSRWVH 280 (369)
Q Consensus 217 ~~v~iwD~~~~~~~~~~~~~-~-----~~~-~~~v~~v~~sp~g-~lasgs~D------~~v~vwD~~~--~~~~~~~~~ 280 (369)
..+.+||..+. .....- . ... ...-.++.+..++ .++.|+.+ ..+.+||+.+ ++.+..+..
T Consensus 412 ~~v~~yd~~~~---~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~ 488 (695)
T 2zwa_A 412 NEILQLSIHYD---KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH 488 (695)
T ss_dssp CCEEEEEECSS---CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB
T ss_pred CcEEEEECCCC---eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC
Confidence 46888998875 322211 1 010 1222333343367 77777643 3578899887 555544433
Q ss_pred cccCceEEEEEcCCCCCEEEEEECCC--eEEEEECcCCceeEEE---------EcCCCeeeeeEcC-CCCEEEEEeC--C
Q 017601 281 CSKYEITGLSFSSIDSNYIYVQGVDY--EVFCGQWRESSKVFAF---------RGDSNWLGFSKCS-NRDVLGGWSD--S 346 (369)
Q Consensus 281 h~~~~v~~l~~sp~d~~~l~s~s~D~--~i~vwd~~~~~~~~~~---------~g~~~~~~~~~~~-d~~~l~sgs~--d 346 (369)
. ...-..+.+ . ++.+++.||.++ .+.+||..+..-...- .+|. .+.... ++.+++.|+. +
T Consensus 489 ~-R~~h~~~~~-~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~---a~v~~~~~~~iyv~GG~~~~ 562 (695)
T 2zwa_A 489 T-RFRHSACSL-P-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSA---GLEFDPVSKQGIILGGGFMD 562 (695)
T ss_dssp C-CBSCEEEEC-T-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSC---EEEEETTTTEEEEECCBCTT
T ss_pred C-cccceEEEE-c-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccccee---EEEEeCCCCEEEEECCcCCC
Confidence 2 222233332 3 678888888765 6899998875422211 1121 111111 2556666665 2
Q ss_pred -----CcEEEEECCCCc
Q 017601 347 -----GSIFVADVVAKE 358 (369)
Q Consensus 347 -----g~I~iWd~~~~~ 358 (369)
..+.+||+.+..
T Consensus 563 ~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 563 QTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSCBCCEEEEEEECTTC
T ss_pred CCeeeCcEEEEEccCCc
Confidence 458889987765
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.90 E-value=19 Score=35.07 Aligned_cols=57 Identities=23% Similarity=0.248 Sum_probs=39.3
Q ss_pred EEEEECCCC-cEEEEeCC------------CcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEE
Q 017601 245 YAVCSSSTG-NIAVAGAD------------RTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQ 302 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D------------~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~ 302 (369)
=-|+|+|.| +++.-..+ ..+.+.+..+++...-+.++...+++.+.|+| |++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 457899999 33332211 23556677777776666666567999999999 98877654
No 344
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.45 E-value=35 Score=33.08 Aligned_cols=61 Identities=23% Similarity=0.226 Sum_probs=40.9
Q ss_pred CcEEEEEECCCC--cEEEEeC-----------CCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEE
Q 017601 242 DILYAVCSSSTG--NIAVAGA-----------DRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQG 303 (369)
Q Consensus 242 ~~v~~v~~sp~g--~lasgs~-----------D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s 303 (369)
.....|+|.++| +|.+=.. ...|..+|..+++...-+.+....+++.++|+| |++.|..+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEEE
Confidence 446779999999 3334221 125777787777765555443246799999999 998876653
No 345
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=61.38 E-value=93 Score=27.99 Aligned_cols=139 Identities=14% Similarity=0.159 Sum_probs=89.6
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCC-ceeeeeccccc---c
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRR-WSALSRWVHCS---K 283 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~-~~~~~~~~~h~---~ 283 (369)
..++|.-...+++|+|+.+. ..++.+... ..|.-=.|-.+..|+--. +..|.-|++.. ..+...+.-|. .
T Consensus 78 ~~ViALrag~~LQiFnletK---~klks~~~~--e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 78 SKVIALKAGKTLQIFNIEMK---SKMKAHTMT--DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSEEEEEETTEEEEEETTTT---EEEEEEECS--SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred ccEEEEecCCeEEEechHHh---hhhcceecC--CccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhccc
Confidence 46777666889999999998 677777665 677666776555333322 45799999874 45555544431 2
Q ss_pred CceEEEEEcCCCCCEEEEEEC-------CCeEEEEECcCCceeEEEEcCCCeeeeeEcC-C----CCEEEE-EeC---CC
Q 017601 284 YEITGLSFSSIDSNYIYVQGV-------DYEVFCGQWRESSKVFAFRGDSNWLGFSKCS-N----RDVLGG-WSD---SG 347 (369)
Q Consensus 284 ~~v~~l~~sp~d~~~l~s~s~-------D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~-d----~~~l~s-gs~---dg 347 (369)
..|.....++ +.+.++..|. .|.+.++..+. +..+.+.||. ..+.... + ...|++ +.. .+
T Consensus 152 ~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGha--a~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 152 CQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHA--ASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp CEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSE--EEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred ceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeee--eeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 4688888898 8888766542 35677887765 4557788987 5554421 1 222333 322 25
Q ss_pred cEEEEECCC
Q 017601 348 SIFVADVVA 356 (369)
Q Consensus 348 ~I~iWd~~~ 356 (369)
.+.|-++..
T Consensus 228 kLhIiEi~~ 236 (365)
T 2xzh_A 228 KLHIIEVGT 236 (365)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEcCC
Confidence 888888744
No 346
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=58.75 E-value=1.2e+02 Score=28.26 Aligned_cols=95 Identities=8% Similarity=0.014 Sum_probs=49.0
Q ss_pred CcEEEEEcC-CeEEEEeCCcccCCceeeeeec-----cCCCcEEEEEECCC----CcE-EEEeC------------CCcE
Q 017601 208 PNMLAVTEG-CQLTIWDLRMKENGGCLHRICG-----SVGDILYAVCSSST----GNI-AVAGA------------DRTV 264 (369)
Q Consensus 208 ~~lla~s~d-~~v~iwD~~~~~~~~~~~~~~~-----~~~~~v~~v~~sp~----g~l-asgs~------------D~~v 264 (369)
+.|+.+... +.|.+++..++.. ..+..+.. .....+..|+|+|+ +.| ++-+. ...|
T Consensus 38 G~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v 116 (454)
T 1cru_A 38 NQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTII 116 (454)
T ss_dssp SCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEE
Confidence 355555555 4788887654411 12222211 01356789999994 533 33221 1245
Q ss_pred EEEeCCCc-------eeee-eccccccCceEEEEEcCCCCCEEEEEEC
Q 017601 265 TIYDPRRW-------SALS-RWVHCSKYEITGLSFSSIDSNYIYVQGV 304 (369)
Q Consensus 265 ~vwD~~~~-------~~~~-~~~~h~~~~v~~l~~sp~d~~~l~s~s~ 304 (369)
.-|+.... +.+. .+..........|.|.| ||.+.++.+.
T Consensus 117 ~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 117 RRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp EEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred EEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 54554321 1121 12211012478999999 9998887654
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=55.43 E-value=1.6e+02 Score=29.00 Aligned_cols=143 Identities=8% Similarity=0.028 Sum_probs=79.7
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCceeeeee--cc----CCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCc-----eee-
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGGCLHRIC--GS----VGDILYAVCSSSTGNIAVAGADRTVTIYDPRRW-----SAL- 275 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~~~~~~~--~~----~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~-----~~~- 275 (369)
+.|-.++ ++-+..||.+++ +. ..+. .. ....|+++...++|.|-.|...+-+.++|.++. ...
T Consensus 384 g~lWigt-~~GL~~~~~~~~---~~-~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~ 458 (758)
T 3ott_A 384 QQLWIAT-DGSINRYDYATR---QF-IHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYI 458 (758)
T ss_dssp SCEEEEE-TTEEEEEETTTT---EE-EEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEE
T ss_pred CCEEEEe-CCcHhhcCcCCC---cE-EEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCccee
Confidence 3444455 457889998765 32 2222 11 024689998888885555666666888886531 111
Q ss_pred --eecc---ccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEc----CCCeeeeeEcCCCCEEEEEeCC
Q 017601 276 --SRWV---HCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRG----DSNWLGFSKCSNRDVLGGWSDS 346 (369)
Q Consensus 276 --~~~~---~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g----~~~~~~~~~~~d~~~l~sgs~d 346 (369)
..+. +-....|.++...+ ++++.+.++..+-+..+|.++++....... ......+....+|.+.++ +..
T Consensus 459 ~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~ 536 (758)
T 3ott_A 459 AEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG 536 (758)
T ss_dssp CSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT
T ss_pred cccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC
Confidence 1111 11023589999888 888876555556788899877654332111 111122222336666654 445
Q ss_pred CcEEEEECCCCc
Q 017601 347 GSIFVADVVAKE 358 (369)
Q Consensus 347 g~I~iWd~~~~~ 358 (369)
| +..+|.++++
T Consensus 537 G-l~~~~~~~~~ 547 (758)
T 3ott_A 537 G-VMRINPKDES 547 (758)
T ss_dssp E-EEEECC--CC
T ss_pred c-eEEEecCCCc
Confidence 5 7788876554
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.36 E-value=12 Score=39.57 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=31.0
Q ss_pred ceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEE
Q 017601 285 EITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAF 322 (369)
Q Consensus 285 ~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~ 322 (369)
.+.+++..+ +..++.+-+.|+++|+||+.++.++.+.
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566667 8889999999999999999998887776
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=49.07 E-value=1.3e+02 Score=26.14 Aligned_cols=55 Identities=7% Similarity=0.057 Sum_probs=31.1
Q ss_pred cEEEEeCCC--ceeeeeccccccCceEEEEEcCCCCCEEEEEECCC------eEEEEECcCCceeEE
Q 017601 263 TVTIYDPRR--WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDY------EVFCGQWRESSKVFA 321 (369)
Q Consensus 263 ~v~vwD~~~--~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~------~i~vwd~~~~~~~~~ 321 (369)
.+.+||+.+ ++.+..+... ...-.++. - ++++++.||.++ .|.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~--~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQG-RAYGVSLP--W-NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSC-CBSSEEEE--E-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCC-cccceeEE--e-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 577899876 5555555433 23223333 2 668888888653 355568877655443
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=45.78 E-value=34 Score=34.11 Aligned_cols=70 Identities=10% Similarity=0.087 Sum_probs=44.1
Q ss_pred eEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCC------CeeeeeEcC------CCCEEEEEe--CCCcEEE
Q 017601 286 ITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDS------NWLGFSKCS------NRDVLGGWS--DSGSIFV 351 (369)
Q Consensus 286 v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~------~~~~~~~~~------d~~~l~sgs--~dg~I~i 351 (369)
|.++.+ +..++++-+.|.++|+||++++.++....-.. .|..-...+ -+.++++=+ .+|..++
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~ 300 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQM 300 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEE
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEE
Confidence 554444 45899999999999999999998887764311 011100001 125555444 6789999
Q ss_pred EECCCCc
Q 017601 352 ADVVAKE 358 (369)
Q Consensus 352 Wd~~~~~ 358 (369)
|++....
T Consensus 301 ~~l~~~~ 307 (729)
T 3f7f_A 301 GTLLVDS 307 (729)
T ss_dssp EEEEC--
T ss_pred EEEEEcC
Confidence 9986543
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=38.75 E-value=2.9e+02 Score=27.11 Aligned_cols=140 Identities=12% Similarity=0.093 Sum_probs=75.1
Q ss_pred CcEEEEEcCCeEEEEeCCcccCCceeeeee----ccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeee-cccc-
Q 017601 208 PNMLAVTEGCQLTIWDLRMKENGGCLHRIC----GSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSR-WVHC- 281 (369)
Q Consensus 208 ~~lla~s~d~~v~iwD~~~~~~~~~~~~~~----~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~-~~~h- 281 (369)
+.+..++.+ .+..||..++ + +..+. ......|+++....+|.|-.|..+ -+..+|..+++.... ....
T Consensus 113 g~lWigt~~-Gl~~~~~~~~---~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~ 186 (758)
T 3ott_A 113 DTLWLGALN-GLYTYQLQSR---K-LTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHS 186 (758)
T ss_dssp TEEEEEETT-EEEEEETTTC---C-EEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCT
T ss_pred CcEEEEcCC-cceeEeCCCC---e-EEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCcc
Confidence 455555555 6888998764 2 22231 110356899988888844445554 477788876543221 1111
Q ss_pred --ccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEE-cCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCCC
Q 017601 282 --SKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFR-GDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVAK 357 (369)
Q Consensus 282 --~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~-g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~~ 357 (369)
....|.++...+ ++..|-.+. ++-+..+|..+++...... .......+....+|.+.+ |+.+ -+.+++..++
T Consensus 187 ~~~~~~i~~i~~d~-~~~~lWigt-~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 187 SQSNLFVNSLLEDT-TRQCVWIGT-EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTT 261 (758)
T ss_dssp TCSSCCEEEEEEET-TTTEEEEEE-EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTS
T ss_pred ccccceeEEEEEEC-CCCEEEEEE-CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCC
Confidence 023488888777 666544444 3568888987654322111 011011222233565554 4444 4778877654
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=38.69 E-value=2.1e+02 Score=25.42 Aligned_cols=102 Identities=12% Similarity=0.043 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCeEEEEeCCc-ccCCceeeeeeccCCCcEEEEEECC--CCcEEEEeCCC----cEEEEe-C-CCceeeee
Q 017601 207 GPNMLAVTEGCQLTIWDLRM-KENGGCLHRICGSVGDILYAVCSSS--TGNIAVAGADR----TVTIYD-P-RRWSALSR 277 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~-~~~~~~~~~~~~~~~~~v~~v~~sp--~g~lasgs~D~----~v~vwD-~-~~~~~~~~ 277 (369)
.+.|.+++..| +.+++... +..-..... ... ...|.+|++.| .+.|.++...+ .|...+ - ++++.+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~-~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-VFL-GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-EST-TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-cCC-CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCc
Confidence 34677777666 55554322 211111111 111 36799999998 44555555444 444332 1 23444332
Q ss_pred ---cccc-------ccCceEEEEEcCCC-CCEEEEEECCCeEEEE
Q 017601 278 ---WVHC-------SKYEITGLSFSSID-SNYIYVQGVDYEVFCG 311 (369)
Q Consensus 278 ---~~~h-------~~~~v~~l~~sp~d-~~~l~s~s~D~~i~vw 311 (369)
+... ....|.++++.|.+ ...|..+...+.|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 1111 01358889998744 5666666666665544
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.93 E-value=21 Score=37.78 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=28.8
Q ss_pred cEEEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeec
Q 017601 243 ILYAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRW 278 (369)
Q Consensus 243 ~v~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~ 278 (369)
.+.+++..++. .+++-+.|+++||||+.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34455566676 8889999999999999999887763
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=35.34 E-value=35 Score=33.97 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCceeeeeec
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICG 238 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~ 238 (369)
+..+++.+-|+++|+||++++ +++....-
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~---~lv~t~DL 259 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSF---TLIQDYDM 259 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTT---EEEEEEET
T ss_pred CcEEEEEEcCCeEEEEEcCCC---ceEEeecc
Confidence 568889999999999999998 77766543
No 355
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=34.85 E-value=2.9e+02 Score=25.90 Aligned_cols=195 Identities=10% Similarity=0.007 Sum_probs=99.8
Q ss_pred EEEEEecCCcEEEEEecCCCCCCccccccccCCCCCCCCCCeeEEEECCCCceeEEEEec-----ccceEEEEeCCcceE
Q 017601 110 VLGSVDSYGHLIVSKLDTSGKDVDRLTYSVLPQDCGVGEGSWSGLCFSPSQWSMAAVARS-----FSKSIDVYDQDIHLR 184 (369)
Q Consensus 110 ~las~d~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~a~~~s-----~d~~i~lwd~~~~~~ 184 (369)
.||-+.. ..|+-|++..... +..-+. .|.. ....-+.+...+++..-++++|-+ -.|.+.||..++.+.
T Consensus 118 ~l~lVT~-taVyHWsi~~~s~--P~kvFd--R~~~-L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s 191 (494)
T 1bpo_A 118 TVALVTD-NAVYHWSMEGESQ--PVKMFD--RHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 191 (494)
T ss_dssp EEEEECS-SEEEEEESSSSCC--CEEEEE--CCGG-GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE
T ss_pred eEEEEcC-CeeEEecccCCCC--chhhee--cchh-cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc
Confidence 4554444 3689999864321 111111 1110 011224455666644433333311 246789998876554
Q ss_pred EEEeeeCCcceeeeccC-CCCCCCCcEEEEEc----CCeEEEEeCCccc-CCcee--eee----eccC-CCcEEEEEECC
Q 017601 185 TLRTLWYPSSLNFVQNL-SPVNGGPNMLAVTE----GCQLTIWDLRMKE-NGGCL--HRI----CGSV-GDILYAVCSSS 251 (369)
Q Consensus 185 ~~~~~~~~~~v~~~~~~-~~~~~~~~lla~s~----d~~v~iwD~~~~~-~~~~~--~~~----~~~~-~~~v~~v~~sp 251 (369)
..-. .| ...|.... +.++....+++-+. .+++.|-++.... ..... +.. .... .+-.-++-.|+
T Consensus 192 Q~ie-Gh--aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ 268 (494)
T 1bpo_A 192 QPIE-GH--AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE 268 (494)
T ss_dssp EEEC-CS--EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET
T ss_pred chhe-ee--eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc
Confidence 3311 12 22232211 11111234555332 3789999986431 11111 111 1100 23344566666
Q ss_pred CC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 252 TG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 252 ~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
.- .+..-..-|.|.+||+.++.++..-.-. .+.|..-+-.. ...-++.....|.|.--.++.
T Consensus 269 kygviyviTK~G~i~lyDleTgt~i~~nrIs-~~~iF~t~~~~-~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 269 KHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHE-ATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEET-TTTEEEEEETTCEEEEEEECT
T ss_pred cCCEEEEEecCceEEEEecccceeeeeeccc-CCceEEecccC-CCCcEEEEccCceEEEEEEcc
Confidence 65 7777788999999999999998766555 56666555555 444455555777766655554
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=34.23 E-value=2.2e+02 Score=24.27 Aligned_cols=131 Identities=11% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCcEEEEEcCCeEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCCcEEEEeCCCcEEEEeCCCceeeeeccccccCce
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTGNIAVAGADRTVTIYDPRRWSALSRWVHCSKYEI 286 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v 286 (369)
....++.. |+.|..|-.... ..+..-... ...|..++-..+-.++. . ||.|..|-......+..-..- ...|
T Consensus 33 ~~h~~~l~-~G~v~~wG~n~~---Gqlg~p~~~-~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~-~~~v 104 (282)
T 3qhy_B 33 YFHGLALK-GGKVLGWGANLN---GQLTMPAAT-QSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEA-RSGV 104 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCSS---STTSCCGGG-GSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGG-SSSE
T ss_pred CCeEEEEE-CCEEEEEeCCCC---CCCCCCccC-CCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCccc-CCCe
Q ss_pred EEEEEcCCCCCEEEEEECCCeEEEEECcCCceeEEEEcCCCeeeeeEcC-CCCEEEEEeCCCcEEEE
Q 017601 287 TGLSFSSIDSNYIYVQGVDYEVFCGQWRESSKVFAFRGDSNWLGFSKCS-NRDVLGGWSDSGSIFVA 352 (369)
Q Consensus 287 ~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~~~~~~~~g~~~~~~~~~~~-d~~~l~sgs~dg~I~iW 352 (369)
..++... .+.+.-. |+.|..|-......+-.-.... ..+.... .....+.-. ||.|+.|
T Consensus 105 ~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~~~~~~--~~i~~i~~G~~~~~~l~-~G~v~~w 164 (282)
T 3qhy_B 105 DAIAAGA---WASYALK-DGKVIAWGDDSDGQTTVPAEAQ--SGVTALDGGVYTALAVK-NGGVIAW 164 (282)
T ss_dssp EEEEEET---TEEEEEE-TTEEEEEECCTTSTTSCCGGGG--SSEEEEEECSSEEEEEE-TTEEEEE
T ss_pred EEEECcC---CEEEEEe-CCeEEEecCCCCCcCCCCccCC--CCeEEEEcccCEEEEEE-CCEEEEe
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=29.75 E-value=3.4e+02 Score=25.15 Aligned_cols=108 Identities=15% Similarity=0.070 Sum_probs=58.3
Q ss_pred eeCCcceeeeccCCCCCCCC-cEEEEEcCCeEEEEeCCcccCCceeeeee-----c---cCCCcEEEEEECCC----C-c
Q 017601 189 LWYPSSLNFVQNLSPVNGGP-NMLAVTEGCQLTIWDLRMKENGGCLHRIC-----G---SVGDILYAVCSSST----G-N 254 (369)
Q Consensus 189 ~~~~~~v~~~~~~~~~~~~~-~lla~s~d~~v~iwD~~~~~~~~~~~~~~-----~---~~~~~v~~v~~sp~----g-~ 254 (369)
+.+|..+.+.. ++. +++.+...|.|++++.........+..+. + ........|+|+|+ + +
T Consensus 13 L~~P~~~a~~p------dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 13 LRQPVGALHSG------DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp ESSEEEEECCS------SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCCceEEEECC------CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 34566665554 453 57777888999999754221111222111 0 00256789999997 5 2
Q ss_pred EEEEe--CCC----------cEEEEeCCC----------ceeeeecc----ccccCceEEEEEcCCCCCEEEEEECCC
Q 017601 255 IAVAG--ADR----------TVTIYDPRR----------WSALSRWV----HCSKYEITGLSFSSIDSNYIYVQGVDY 306 (369)
Q Consensus 255 lasgs--~D~----------~v~vwD~~~----------~~~~~~~~----~h~~~~v~~l~~sp~d~~~l~s~s~D~ 306 (369)
.++-+ .++ .|.-|.+.. .+.+..+. .| .-..|.|.| ||.+.++.+..+
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H---~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH---LGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS---CEEEEEECT-TSCEEEEECCTT
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc---cCCcEeECC-CCcEEEEeCCCC
Confidence 22222 111 233344431 12232222 24 367899999 999888876543
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=27.49 E-value=2.9e+02 Score=23.54 Aligned_cols=144 Identities=16% Similarity=0.096 Sum_probs=83.8
Q ss_pred CCcEEEEEcCCeEEEEeCCcc---cCCceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCCC---------ce
Q 017601 207 GPNMLAVTEGCQLTIWDLRMK---ENGGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPRR---------WS 273 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~---~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~~---------~~ 273 (369)
+..++.++.+|.++-..+..- ..+.....+.. ++.+-.+....+. .++..+..|.+..+.... |.
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke--gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE--GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT--TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC--CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 357888899999988876432 01112222332 3566665554444 788888899887776422 22
Q ss_pred eeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC-------CceeEEEE-cCCCeeeeeEcCCCCEEEEEeC
Q 017601 274 ALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE-------SSKVFAFR-GDSNWLGFSKCSNRDVLGGWSD 345 (369)
Q Consensus 274 ~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~-------~~~~~~~~-g~~~~~~~~~~~d~~~l~sgs~ 345 (369)
....+.. .+.|.++...+ ++..++..+..|.++...+.. ++-+..+. ++. ...+....+.+.++..+.
T Consensus 158 ~~i~L~~--~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~-lv~~~~~~~~~~i~~~t~ 233 (276)
T 3no0_A 158 QGIKLEK--NDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDT-LVDLIPIKEEVELLITTK 233 (276)
T ss_dssp ECCCCCT--TCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSC-EEEEEEESSEEEEEEEET
T ss_pred EEEccCC--CCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCc-EEEEEEeCCCCEEEEEcC
Confidence 2223332 35676666555 567888889999999888753 22222221 222 222222334456777888
Q ss_pred CCcEEE--EECCC
Q 017601 346 SGSIFV--ADVVA 356 (369)
Q Consensus 346 dg~I~i--Wd~~~ 356 (369)
+|.+.. ++...
T Consensus 234 ~G~~ir~~~~~~~ 246 (276)
T 3no0_A 234 NGKAFYDKINQKD 246 (276)
T ss_dssp TSCEEEEEEEGGG
T ss_pred CCeEEEeeeCHHH
Confidence 888877 77543
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=27.21 E-value=3.8e+02 Score=24.84 Aligned_cols=104 Identities=9% Similarity=-0.047 Sum_probs=60.2
Q ss_pred CcEEEEEECCCC--cEEEEeCCCcEEEEeCCCc---eeeeecc---------ccccCceEEEEEcCCC----CCEEEEEE
Q 017601 242 DILYAVCSSSTG--NIAVAGADRTVTIYDPRRW---SALSRWV---------HCSKYEITGLSFSSID----SNYIYVQG 303 (369)
Q Consensus 242 ~~v~~v~~sp~g--~lasgs~D~~v~vwD~~~~---~~~~~~~---------~h~~~~v~~l~~sp~d----~~~l~s~s 303 (369)
.....|+|.|+| +|+++...|.|++++.... ..+..+. +. ......|+|+| + +.+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~-e~Gllgia~~P-~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGD-ERGLLSLAFHP-NYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSC-CCSEEEEEECT-THHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccC-CCcceeeEeCC-CCcCCCEEEEEEe
Confidence 456789999998 5888889999999975422 1222221 11 34678999999 5 44555444
Q ss_pred CC------------CeEEEEECcC----------CceeEEEE---cCCCeeeeeEcCCCCEEEEEeCCC
Q 017601 304 VD------------YEVFCGQWRE----------SSKVFAFR---GDSNWLGFSKCSNRDVLGGWSDSG 347 (369)
Q Consensus 304 ~D------------~~i~vwd~~~----------~~~~~~~~---g~~~~~~~~~~~d~~~l~sgs~dg 347 (369)
.+ ..|.-|.+.. .+.+..+. ++.....+..-+||.+.++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 21 1344455532 12333332 122223455567888777666543
No 360
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.03 E-value=6e+02 Score=25.31 Aligned_cols=156 Identities=8% Similarity=-0.001 Sum_probs=0.0
Q ss_pred eeEEEECCCCceeEEEEecccceEEEEeCCcceEEEEeee-----CCcceeeeccCCCCCCCCcEEEEEcCC----eEEE
Q 017601 151 WSGLCFSPSQWSMAAVARSFSKSIDVYDQDIHLRTLRTLW-----YPSSLNFVQNLSPVNGGPNMLAVTEGC----QLTI 221 (369)
Q Consensus 151 ~~~l~~~p~~~~~~a~~~s~d~~i~lwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~lla~s~d~----~v~i 221 (369)
+.+|+++|.++..+.++....+-.+--|.++.-+.+.... ....+..+...+.++ +..++++++.. ...+
T Consensus 17 i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~-~~i~~~~g~~~~~~~~~v~ 95 (789)
T 1sqj_A 17 ITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP-DRLYLAQGRYVGDEWAAFY 95 (789)
T ss_dssp EEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE-EEEEEEECSCTTSSCCEEE
T ss_pred EEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCC-CEEEEEeCccCCCcccEEE
Q ss_pred EeCCcccCCceeee-------eeccCCCcEEEEEECCCC--cEEEEe-CCCcEEEEeC-CCceeeeecc---ccccCceE
Q 017601 222 WDLRMKENGGCLHR-------ICGSVGDILYAVCSSSTG--NIAVAG-ADRTVTIYDP-RRWSALSRWV---HCSKYEIT 287 (369)
Q Consensus 222 wD~~~~~~~~~~~~-------~~~~~~~~v~~v~~sp~g--~lasgs-~D~~v~vwD~-~~~~~~~~~~---~h~~~~v~ 287 (369)
.....++.-+.+.. +... ..+..++++|.. .+..+. ..+..+-=|- ++++.+..+. .. ...+.
T Consensus 96 ~S~DgG~TW~~~~~~~~~~~~~~~~--~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~-~~~~~ 172 (789)
T 1sqj_A 96 VSEDRGQSFTIYESPFPMGANDMGR--NNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTN-GIGYT 172 (789)
T ss_dssp EESSTTSEEEEEECSSCCCTTSTTT--TSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCST-TTCEE
T ss_pred EECCCCCcceeccCCcccCccCCCc--cceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCC-CCCeE
Q ss_pred EEEEcCCCCCEEEEEECC-CeEEE
Q 017601 288 GLSFSSIDSNYIYVQGVD-YEVFC 310 (369)
Q Consensus 288 ~l~~sp~d~~~l~s~s~D-~~i~v 310 (369)
.+.+.|.++..++.+..+ +.|..
T Consensus 173 ~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EEEECTTSTTCEEEEESSTTCEEE
T ss_pred EEEECCCCCCEEEEEEcCCCeEEE
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=22.00 E-value=3.7e+02 Score=22.84 Aligned_cols=100 Identities=12% Similarity=0.011 Sum_probs=62.3
Q ss_pred cEEEEeCCCcEEEEeCCC------ceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC---------Cce
Q 017601 254 NIAVAGADRTVTIYDPRR------WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE---------SSK 318 (369)
Q Consensus 254 ~lasgs~D~~v~vwD~~~------~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~---------~~~ 318 (369)
.++..+.+|.|+-..+.. +.....+.. .+.+..+.... ....++..+..|.+..+.... |..
T Consensus 82 ~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke--gD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 82 RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE--GDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp EEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT--TCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC--CCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 788889999998877543 222233443 35677766665 556788888999988887643 111
Q ss_pred eEEEEcCCCeeeeeEcCCCCEEEEEeCCCcEEEEECCC
Q 017601 319 VFAFRGDSNWLGFSKCSNRDVLGGWSDSGSIFVADVVA 356 (369)
Q Consensus 319 ~~~~~g~~~~~~~~~~~d~~~l~sgs~dg~I~iWd~~~ 356 (369)
...+........+....++..++..++.|.++...+..
T Consensus 159 ~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 159 GIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred EEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 11122222222333334567888899999998887654
No 362
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=21.13 E-value=8.5e+02 Score=26.77 Aligned_cols=69 Identities=10% Similarity=-0.091 Sum_probs=41.6
Q ss_pred EEEEECCCC-cEEEEeCCCcEEEEeCCCceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcC
Q 017601 245 YAVCSSSTG-NIAVAGADRTVTIYDPRRWSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRE 315 (369)
Q Consensus 245 ~~v~~sp~g-~lasgs~D~~v~vwD~~~~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~ 315 (369)
-++..|+.- .+..-..-|.|.+||+.++.++..-.-. ...|...+-+...+.. +.....|.|.--.+..
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris-~~~iF~~~~~~~~~g~-~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGI-IGVNRKGQVLSVCVEE 331 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhcccc-CCceEEeccCCCCCce-EEEcCCceEEEEEEcc
Confidence 345556554 6667778899999999999887754444 4555544444313333 3333556555444443
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=21.04 E-value=4.2e+02 Score=23.18 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=81.6
Q ss_pred CCcEEEEEcCCeEEEEeCCccc---C-CceeeeeeccCCCcEEEEEECCCC-cEEEEeCCCcEEEEeCC--C--------
Q 017601 207 GPNMLAVTEGCQLTIWDLRMKE---N-GGCLHRICGSVGDILYAVCSSSTG-NIAVAGADRTVTIYDPR--R-------- 271 (369)
Q Consensus 207 ~~~lla~s~d~~v~iwD~~~~~---~-~~~~~~~~~~~~~~v~~v~~sp~g-~lasgs~D~~v~vwD~~--~-------- 271 (369)
+..++.++.+|.++--.+..-. + +.....+... +.+-.+...... .|+..+..|.+..+... .
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~--D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN--DELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT--CCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC--CEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 4688889999999988765321 1 1112223322 555554443334 77777888887766554 2
Q ss_pred -ceeeeeccccccCceEEEEEcCCCCCEEEEEECCCeEEEEECcCC-------ceeEEEE--c-CCCeeeeeEcCCCCEE
Q 017601 272 -WSALSRWVHCSKYEITGLSFSSIDSNYIYVQGVDYEVFCGQWRES-------SKVFAFR--G-DSNWLGFSKCSNRDVL 340 (369)
Q Consensus 272 -~~~~~~~~~h~~~~v~~l~~sp~d~~~l~s~s~D~~i~vwd~~~~-------~~~~~~~--g-~~~~~~~~~~~d~~~l 340 (369)
|...-.+.. .+.|.++..-+ ++..++..+..|.++.-.+..- +-+..++ . ...........+.+.|
T Consensus 187 ~Gv~~i~L~~--~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i 263 (327)
T 3uc1_A 187 SGVQGMRFNI--DDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSEL 263 (327)
T ss_dssp BCEESSCCCT--TCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEE
T ss_pred CCeeeecCCC--CCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccE
Confidence 222223332 45677777666 6678889999999998876431 1111111 1 1112232223345566
Q ss_pred EEEeCCCcEEEEECC
Q 017601 341 GGWSDSGSIFVADVV 355 (369)
Q Consensus 341 ~sgs~dg~I~iWd~~ 355 (369)
+..+.+|.+..++..
T Consensus 264 ~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 264 YAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEGGGCEEEEEGG
T ss_pred EEEcCCCeEEEEehh
Confidence 677778877777654
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=20.67 E-value=3.3e+02 Score=26.32 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=22.8
Q ss_pred eEEEEeCCcccCCceeeeeeccCCCcEEEEEECCCC-cEEEE
Q 017601 218 QLTIWDLRMKENGGCLHRICGSVGDILYAVCSSSTG-NIAVA 258 (369)
Q Consensus 218 ~v~iwD~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~lasg 258 (369)
.|..+|..++ +....+.......++.++|+||+ .|.++
T Consensus 510 ~v~~~dp~tG---el~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATG---EIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTC---CEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCC---eEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4555666555 33333333324678999999999 55443
Done!