BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017603
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/329 (77%), Positives = 281/329 (85%), Gaps = 15/329 (4%)
Query: 1 MSSVLNTVLSTRLSNVKSTNRVRTRPVLSPVSVSFSRRR--------------LTVRAQE 46
M+S+LNTV + S V S +RV + + SV F+RRR VRA E
Sbjct: 1 MTSILNTVSTIHSSRVTSVDRVGVLSLRNSDSVEFTRRRSGFSTLIYESPGRRFVVRAAE 60
Query: 47 PNANEVKPQAPDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCG 106
+ ++VK Q PDKAPA GSS NQLLGIKGA+QETNKWKIRLQLTKPVTWPPL+WG+VCG
Sbjct: 61 TDTDKVKSQTPDKAPAG-GSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCG 119
Query: 107 AAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISE 166
AAASGNFHW EDVAKSI+CM+MSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE
Sbjct: 120 AAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISE 179
Query: 167 NEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIG 226
EVITQ+WVLLL GLG+AG+LDVWAGH PT+F+LA+GGSLLSYIYSAPPLKLKQNGW+G
Sbjct: 180 PEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVG 239
Query: 227 NFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQS 286
NFALGASYISLPWWAGQALFGTLTPD++VLTLLYSIAGLGIAIVNDFKSVEGDRA+GLQS
Sbjct: 240 NFALGASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQS 299
Query: 287 LPVAFGPETAKWICVGAIDITQISVAASL 315
LPVAFG ETAKWICVGAIDITQ+SVA L
Sbjct: 300 LPVAFGTETAKWICVGAIDITQLSVAGYL 328
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/290 (83%), Positives = 261/290 (90%), Gaps = 5/290 (1%)
Query: 30 PVSVSFSRRRL--TVRAQEPNANEV--KPQAPDKAPAASGSSFNQLLGIKGAAQETNKWK 85
P S++ +RRR V A + +A E KP PDKAPAA GSSFNQLLGIKGA QETN WK
Sbjct: 31 PSSLTLNRRRSFPVVCAADADAKETTKKPTIPDKAPAA-GSSFNQLLGIKGAKQETNIWK 89
Query: 86 IRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWY 145
IRLQLTKPVTWPPL+WG++CGAAASGNFHW +EDV KSIVCM+MSGPCLTGYTQTINDWY
Sbjct: 90 IRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWY 149
Query: 146 DREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGG 205
DR+IDAINEPYRPIPSGAISENEVITQIWVLLL GLGL LLD+WAGHDFP IF+LA+GG
Sbjct: 150 DRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFPIIFYLALGG 209
Query: 206 SLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGL 265
SLLSYIYSAPPLKLKQNGWIGNFALGASYI LPWWAGQALFGTLTPDI+VLT LYSIAGL
Sbjct: 210 SLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTCLYSIAGL 269
Query: 266 GIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASL 315
GIAIVNDFKS+EGDR +GLQSLPVAFG ETAKWICVGAIDITQ+SVAA L
Sbjct: 270 GIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGAIDITQLSVAAYL 319
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/288 (85%), Positives = 259/288 (89%), Gaps = 4/288 (1%)
Query: 30 PVSVSFSRRRL--TVRAQEPNANEVKPQAPDKAPAASGSSFNQLLGIKGAAQETNKWKIR 87
P S+ +RRR VRA E + E K AP+KAPA GSSFNQLLGIKGA QE + WKIR
Sbjct: 32 PSSLRLNRRRHFQVVRAAETD-KETKANAPEKAPAG-GSSFNQLLGIKGAKQENDIWKIR 89
Query: 88 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDR 147
LQLTKPVTWPPL+WG++CGAAASGNFHW +EDVAKSIVCMIMSGPCLTGYTQTINDWYDR
Sbjct: 90 LQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDR 149
Query: 148 EIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSL 207
+IDAINEPYRPIPSGAISENEVITQIW LLLAGLGL LLDVWAGHDFP IF+LAVGGSL
Sbjct: 150 DIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSL 209
Query: 208 LSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGI 267
LSYIYSAPPLKLKQNGWIGNFALGASYI LPWWAGQALFGTLTPDI+VLT LYSIAGLGI
Sbjct: 210 LSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGI 269
Query: 268 AIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASL 315
AIVNDFKSVEGDRA+GLQSLPVAFG ETAKWICVGAIDITQ+SVA L
Sbjct: 270 AIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYL 317
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 135/234 (57%), Gaps = 9/234 (3%)
Query: 79 QETNKWKIR-LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGY 137
Q W +R +QL KPVTW W +CGA ASG WN E + + ++ M M+GP L G
Sbjct: 23 QSRYAWLVRSIQLMKPVTWFAPTWAFMCGAIASGALGWN-ESIGRLLLGMFMAGPILCGL 81
Query: 138 TQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPT 197
+Q +ND+ DRE+DAINEP+R IPSG +S V VL G +A L
Sbjct: 82 SQVVNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALFLGR------QV 135
Query: 198 IFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLT 257
F++A+G + + YS P++ K+NGWIGN + SY L W AG A F LT + + +
Sbjct: 136 AFFVALG-LVFALAYSLRPIRGKRNGWIGNALVAISYEGLAWMAGHAAFAPLTGESVTIA 194
Query: 258 LLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISV 311
LLYS+ GI VNDFKS+ GD MG++S+PV +G A + V + + QI+V
Sbjct: 195 LLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVAQIAV 248
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 123/226 (54%), Gaps = 11/226 (4%)
Query: 88 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDR 147
L+L +P+TW P IW +CG + G W E ++ M+++GP + G +Q N+W DR
Sbjct: 19 LELIQPITWFPPIWAYLCGTVSVGI--WPGEKWPLVLLGMVLAGPLVCGMSQAANNWCDR 76
Query: 148 EIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSL 207
+DA+NEP RPIPSG I + ++ + L + +L W F V G L
Sbjct: 77 HVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLGPWG-------FGATVFGVL 129
Query: 208 LSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLT--LLYSIAGL 265
++ YS P++LK++GW G + Y LPW+ G A+ P ++T LLY+
Sbjct: 130 AAWAYSVEPIRLKRSGWWGPGLVALCYEGLPWFTGAAVLSAGAPSFFIVTVALLYAFGAH 189
Query: 266 GIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISV 311
GI +NDFK++EGDR G++SLPV GPE A + + + QI V
Sbjct: 190 GIMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMAQILV 235
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 18/238 (7%)
Query: 85 KIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDW 144
+ L+L KPVTW P +W +CGA +S W E+ ++ ++++GP + G +Q NDW
Sbjct: 17 RAMLELIKPVTWFPPMWAYLCGAVSSNVPIW--ENKGVVVLGIVLAGPIVCGMSQAANDW 74
Query: 145 YDREIDAINEPYRPIPSGAISENEVITQIWVLLLA-GLGLAGLLDVWAGHDFPTIFWLAV 203
DR +DAINEP+RPIPSG I +W L +A + L L+ W + F +
Sbjct: 75 CDRHVDAINEPHRPIPSGRIP------GLWGLYIAIAMSLLSLVVGWQLGSWG--FVATL 126
Query: 204 GGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPD------IIVLT 257
G ++ YS P++LK++GW G +G +Y LPW G A+ T D I+++
Sbjct: 127 LGVAAAWAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAVL-LATADTSPGFPIVMMA 185
Query: 258 LLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASL 315
LY++ GI +NDFK++EGDR +G++SLP +GPE A I + + Q V L
Sbjct: 186 TLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLAQALVITML 243
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 83 KWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSI-VCMIMSGPCLTGYTQTI 141
++K +++T+P L+ GIV G S L ++ +I V +++ C G TI
Sbjct: 2 EFKAFIEITRPHNC--LLAGIV-GVLGSIVAAGGLPELKTAILVFLVVFLGCAGG--NTI 56
Query: 142 NDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWL 201
ND++D EID IN P RP+P GA+S + L G+ LA +++W F L
Sbjct: 57 NDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFINIWD-------FLL 109
Query: 202 AVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQA-----LFGTLTPDIIVL 256
A+ + +IY+ KLK +IGN + + + P + A L GTL +
Sbjct: 110 AIVAYVTMFIYA---WKLKPMPFIGNVVVASLTGATPLYGAIAVGEIGLAGTLA----LC 162
Query: 257 TLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASLP 316
L ++A ++ D + +EGD A G ++LP+ G + A + VGA+ VA+ LP
Sbjct: 163 AFLVNVAR---EVIKDIEDIEGDMAKGAKTLPILIGRKRAAY--VGALFAILTVVASFLP 217
Query: 317 TQIRISTRDSRPLTSDIDQLRCFAEVLFTDDSRNAYNGQMSL 358
+ I L D L +L + D A+ Q+ L
Sbjct: 218 IKAGIGLGYLAMLPVDAVILYSAFLILRSQDRETAHRAQILL 259
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 18/233 (7%)
Query: 124 IVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGL 183
++ ++++ C G TIND++D EID IN P RP+P GA+ + +L GL L
Sbjct: 41 LIFLVVTVGCAGG--NTINDYFDYEIDKINRPERPLPRGAMGRKVALYYSMLLFAVGLAL 98
Query: 184 AGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQ 243
A +++++A F L V + +IY+ KLK ++GN + + P +
Sbjct: 99 AYMINIYA-------FILGVIAYVTMFIYA---WKLKPLPFVGNIVVAGLTGATPLYGAV 148
Query: 244 ALFGT-LTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVG 302
A+ L + + L ++A ++ D + VEGD A G ++LP+ +G + A + VG
Sbjct: 149 AVEHLGLAGYLAICAFLVNVAR---EVIKDIEDVEGDMAKGAKTLPIIWGKKRAAY--VG 203
Query: 303 AIDITQISVAASLPTQIRISTRDSRPLTSDIDQLRCFAEVLFTDDSRNAYNGQ 355
+ +A+ LP + + + D+ L +L D A+ Q
Sbjct: 204 VLFALLTVIASFLPVKASVGVGYYAMVPVDLLILYAAYLILRNQDREVAHKSQ 256
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 124 IVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGL 183
+V +++S C G TIND++D EID IN P RP+P GA+ + L GL L
Sbjct: 41 LVFLVVSLGCAGG--NTINDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLAL 98
Query: 184 AGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQ 243
A L+ + A F A+ + ++Y+ KLK +IGN A+ A P +
Sbjct: 99 ALLISLKA-------FAFALLAYITMFLYA---WKLKPLPFIGNIAVAALTGVTPLYGAI 148
Query: 244 A-----LFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKW 298
A L GTL V L ++A IV D + VEGD G ++LP+ G A +
Sbjct: 149 AVGKIGLAGTLA----VCAFLVNVAR---EIVKDIEDVEGDLKKGAKTLPIILGRRKAAY 201
Query: 299 ICVGAIDITQISVAASLPTQIRISTRDSRPLTSDIDQLRCFAEVLFTDDSRNAYNGQMSL 358
V A +A+ LP + + + D+ L +L D + A+ Q+ L
Sbjct: 202 --VAAFFGVATVIASFLPVKAGVGVGYYAMVPVDLIILYAVYLILRNQDEKTAHRSQLLL 259
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
+TG +ND++D EID +N+P RPIPSG IS + L + G+ LA L++ G
Sbjct: 55 VTGAGNGLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVNPLCG- 113
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIS-LPWWAGQALFGTL-TP 251
+A+ S++ +Y+ LK+ + GN ++G Y++ + G A+FG
Sbjct: 114 ------IIALFNSMVLILYAQ---SLKRTPFFGNASVG--YLTGSTFLFGGAVFGMAGLQ 162
Query: 252 DIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWIC 300
++VL LL ++A + IV D + + GD+ G ++LP+ G + A +I
Sbjct: 163 ALVVLFLLATLATIAREIVKDVEDIVGDKKDGARTLPILIGAKKASYIA 211
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 20/165 (12%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
+TG IND++DREIDA+N P RPIPSG IS + L +AG +AGL++
Sbjct: 46 ITGGGNAINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLIN----- 100
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTL--TP 251
+ LA+ S + IY+A +LK GN A+ SY++ + LFG L +P
Sbjct: 101 --QSCLALALLNSFVLIIYAA---RLKGLPVAGNIAI--SYLTGTTF----LFGGLAASP 149
Query: 252 DIIV--LTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPE 294
I L++L ++A L IV D + + GD A G ++LP G
Sbjct: 150 SSITAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKR 194
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 88 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDR 147
+++ +PV + ++ A +G F +++ + S+V TG IND++D
Sbjct: 5 IEILRPVNAVMAVITVMLMALITGRFDFSV--LLASVVVF-----TATGAGNVINDYFDH 57
Query: 148 EIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSL 207
EIDAIN P RPIPSG IS + ++ ++L LA L+ + G P + + V SL
Sbjct: 58 EIDAINRPERPIPSGRISRG--VAGVYSIIL--FALASLMGFYLGL-LPGL--VVVSSSL 110
Query: 208 LSYIYSAPPLKLKQNGWIGNFALGASYIS-LPWWAGQALFGTLTPDIIVLTLLYSIAGLG 266
L Y+ +LK+ +GN + S+++ L + G + G + I+ L + +
Sbjct: 111 LMVYYA---WRLKKRCLVGNITI--SFLTGLSFVFGGIVLGEVRASIL-LGFYAFLMTMA 164
Query: 267 IAIVNDFKSVEGDRAMGLQSLPVAFG 292
IV D + VEGDRA G +LP+ G
Sbjct: 165 REIVKDMEDVEGDRAEGATTLPITHG 190
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND++D EID IN P RP+P GA+S+N + L+ G+ L G+ + A
Sbjct: 54 NIINDYFDYEIDKINRPNRPLPRGALSKN-------IALVYGISLGGVAILIAYLINFEA 106
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGT-LTPDIIVLT 257
F A+G LL Y+Y+ KLK +IGN + P + A+ L + +
Sbjct: 107 FIFALGAYLLMYLYAR---KLKPQPFIGNLVVATLTGITPIYGAIAVGKIGLAGYLALCA 163
Query: 258 LLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASLPT 317
L ++A I D + +EGD+A G ++LP+ +G E++ I G I +A+ LP
Sbjct: 164 FLVNVAR---EIFKDIEDIEGDKAQGAKTLPIVWGIESSSKI--GVIFSVATIIASLLPV 218
Query: 318 Q 318
+
Sbjct: 219 K 219
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 105 CGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAI 164
GA +G F V ++ I + T IND++DR ID IN P RPIP GAI
Sbjct: 30 TGAFVAGGFAVTTAHVTGAVAATIFA----TAAGNAINDYFDRAIDKINRPMRPIPRGAI 85
Query: 165 SENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKL-KQNG 223
SE I +G L V A + +A+ +L++ + +L K
Sbjct: 86 SERGAIV-----------FSGFLFVAAVVSTSVLPLIAIVLALMNLLALVAYTELFKGLP 134
Query: 224 WIGNFALGASYISLPWWAGQALFGTLTP-DIIVLTLLYSIAGLGIAIVNDFKSVEGDRAM 282
+GN A+ A + G A G +T ++VL +L ++A I+ D + ++GDR
Sbjct: 135 GVGN-AIVAYLTGSTFLFGAAAIGRITDFGVVVLFILAALATATREIIKDIEDLDGDRKE 193
Query: 283 GLQSLPVAFGPETAKWICVGAIDITQIS 310
GLQ+LP+ G A + G + + I+
Sbjct: 194 GLQTLPIVIGVTPAYRVATGVLLVAVIA 221
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 115 WNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIW 174
+N E + S+ C+ ++ TG TIND+YD EID IN P RPIPSG I +
Sbjct: 30 YNYEIILGSL-CVFIA----TGSGNTINDYYDYEIDRINAPNRPIPSGKIELKRALYYSL 84
Query: 175 VLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY 234
+L L + L ++ + G + + ++L IY+ LKQ +IGN + A
Sbjct: 85 ILFLVSIILGFIISLENG-------IVVILCTILMIIYAY---DLKQRCFIGNLCV-AIL 133
Query: 235 ISLPWWAGQALFGTLTPDI---IVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAF 291
L + G G +T D+ +L + L I+ D + +EGD+ +LP+ +
Sbjct: 134 TGLTFVFG----GLITKDVNLGFILGFFAFLMTLSREIIKDIEDIEGDKKEDAHTLPIIY 189
Query: 292 GPETAKWICV 301
G + A + V
Sbjct: 190 GTKKAVMLAV 199
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 116 NLEDVAKSIVCMIMSG----PCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVIT 171
N + S+V +SG C GY IN YD ID +N+PY PI +G +S +
Sbjct: 121 NTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQ 176
Query: 172 QIWVLLLAGLGLAGLLDVWAGHDF-PTIFWLAVGGSLLSYIYSAPPLKLKQ--------- 221
W+L++ +AGLL V G +F P I L G L IYS PPL++K+
Sbjct: 177 SAWLLVIF-FAIAGLLVV--GFNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLII 233
Query: 222 ---NGWIGNFAL---GASYISLPW-WAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFK 274
G++ NF + + + LP+ W+ F +T ++ L IAI D
Sbjct: 234 ATVRGFLLNFGVYHATRAALGLPFQWSAPVAF---------ITSFVTLFALVIAITKDLP 284
Query: 275 SVEGDRAMGLQSLPVAFGPETAKWICVGAI---DITQISVAASLPTQIR 320
VEGDR + +L G ++ G + ++ IS+A +P R
Sbjct: 285 DVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISLAFYMPQVFR 333
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 118 EDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLL 177
+ +A ++V +++ TG IND++DR+IDAINEP RPIP GA+S + L
Sbjct: 37 QSMAFAVVATVLA----TGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRGALVYSVALF 92
Query: 178 LAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISL 237
+ L LL W I +A L++Y L N + + G++++
Sbjct: 93 AVAVVLTLLLP-WLAIAIAAINLVA----LVAYTEVFKGLPGVGNALVA-YLTGSTFL-- 144
Query: 238 PWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFG 292
+ G A+ G L ++VL L + A + IV D + ++GDRA GL++LP+ G
Sbjct: 145 --YGGAAVGGDLAA-VVVLFALAACATMAREIVKDVEDIDGDRAEGLRTLPIVIG 196
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
TIND++D EID +N P RPIP GAI + + + GL LA L V A
Sbjct: 54 NTINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEA------- 106
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA--GQALFGTLTPDIIVL 256
A+G L++IY+ KLK +IGN A+ + P + G G L + +
Sbjct: 107 LLFALGAYALTFIYA---WKLKPLPFIGNVAVALLTAATPIYGALGVGRVG-LAGYLAIC 162
Query: 257 TLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASLP 316
L +++ I+ D + +EGD MG ++LP+ G A I +I + + LP
Sbjct: 163 AFLVNVSR---EIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMIS--SIFGVLTVITSFLP 217
Query: 317 TQIRISTRDSRPLTSDIDQLRCFAEVLFTDDSRNAYNGQMSL 358
++ I + + D L+ +V + +A GQ +L
Sbjct: 218 VKVGIGLGYAPIILVDAMILKASIDV--VKNPESASKGQKTL 257
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 127 MIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGL 186
++++ C+ + +N D EID IN+P P+ SG +S V+ L+ GLG A +
Sbjct: 158 VVVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWI 217
Query: 187 LDVWAGHDFPTIFWLAVGGSLLSYIYSA--PPLKLKQN------GWIGNFALGASYISLP 238
+D W +FW +++ Y+ P L+ K+ +I + A+ S +
Sbjct: 218 VDSWP------LFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRS-LGFF 270
Query: 239 WWAGQALFG---TLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPET 295
+F T +I T + SI + IA+ D +EGD G+QSL + GP+
Sbjct: 271 LHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKR 330
Query: 296 AKWICVGAIDIT 307
WICV +++T
Sbjct: 331 VFWICVSLLEMT 342
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 114 HWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQI 173
W + + + +++S GY IND +D EID IN+P RP+PSG I + +
Sbjct: 31 EWKIVPIKLILAMIVVSVIAAGGYI--INDVFDIEIDKINKPNRPLPSGRIKISRARSLS 88
Query: 174 WVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNF----- 228
VL L G+ L+ LL+++A F +A+ L Y Y+ LK+ G +GN
Sbjct: 89 IVLFLVGIVLSVLLNIYA-------FIIALLTVLALYYYAK---DLKKQGLVGNLIVALT 138
Query: 229 -ALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSL 287
AL A Y L ++ G + TL P TL L V + V+GD G+++L
Sbjct: 139 SALSAFYGGLAFFEGSWVIRTLIP-----TLYIFFFTLTREFVKGIEDVKGDMTNGVKTL 193
Query: 288 PVAFGPE 294
V G E
Sbjct: 194 AVRVGIE 200
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND+YD EIDAIN+PYRPIPSG IS+ E + L L G+ L+ L
Sbjct: 53 NAINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFLGFIE------- 105
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTL 258
F + SL Y Y+ LK+ G GN AL + ++ G G LT +I+ +
Sbjct: 106 FLIVTAFSLSWYAYAR---WLKRTGVPGN-ALVSLGVAFTLIFGSLAAGNLTNKVIIFSS 161
Query: 259 LYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFG 292
+ + L V + + GDRA G++++ V G
Sbjct: 162 VAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIG 195
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
++G IND++D +ID+IN P RPIPSG + E ++L G +A ++ G
Sbjct: 63 VSGAGNAINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGS 122
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDI 253
+A+ SLL +Y+ LK +GN ++G S+ + G ++FG I
Sbjct: 123 -------IALFNSLLLILYAK---TLKGTPLLGNLSIGYLTGSV-FLFGASIFG--FGGI 169
Query: 254 IVLTLLYSIAGLGIA---IVNDFKSVEGDRAMGLQSLPVAFGPETAKWICV 301
L++L+ +A L I IV D + +EGD G +LP+ G + A ++ V
Sbjct: 170 KALSVLFLLAALAITAREIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAV 220
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 83 KWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLED---VAKSIVCMIMSGPCLTGYTQ 139
K K L+L + +G + G + NF++ L +A IV ++ G+
Sbjct: 4 KIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLV------CGFGN 57
Query: 140 TINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIF 199
+ND D EID IN+P RP+PS IS ++L+++G+ + L ++ F
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGI-IISLFNMIC-------F 109
Query: 200 WLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLL 259
+A+ S++ Y+Y+ K K+N IGN + S+ + G ++ I+ L L
Sbjct: 110 AIALINSIVLYLYAK---KYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLILFLCAL 166
Query: 260 YSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPET 295
+ A I+ D++ ++GD++ G+ SLP+ +G +
Sbjct: 167 F--ATWSREIIKDYEDLDGDKSEGVISLPIKYGKNS 200
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 36/210 (17%)
Query: 102 GIVCGAAASGN----FHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYR 157
GI+ A+G+ F W I C++++ +TG IND+YD+EIDAIN+P R
Sbjct: 22 GILASIIATGSIPAEFFW--------IFCIVLT---ITGAGNVINDYYDKEIDAINQPDR 70
Query: 158 PIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPL 217
PIPSG I + +L L G G+A L P + +A+G S++ ++Y++
Sbjct: 71 PIPSGQIIPGHALMYAILLFLIGNGIAILFT-----PLP-LAGIAMGNSVILWLYAS--- 121
Query: 218 KLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAG------LGIAIVN 271
LK+ IGN ++ SY++ A LFG + ++ IAG L ++
Sbjct: 122 FLKKTPLIGNISV--SYLA----ASIFLFGGAIQGTQGIISVFPIAGATWGVMLARELIK 175
Query: 272 DFKSVEGDRAMGLQSLPVAFGPETAKWICV 301
D + + GD G ++ P+ +G ++ +
Sbjct: 176 DAEDMPGDNEHGARTFPLLYGIRATIYLAL 205
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 133 CLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAG 192
C GY IN YD ID +N+PY PI +G +S + V+L A G + ++ +
Sbjct: 135 CGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQT--AWLLVVLFAAAGFSIVVTNFG- 191
Query: 193 HDFPTIFWLAVGGSLLSYIYSAPPLKLKQ------------NGWIGNFALGASYISLPWW 240
P I L G L IYS PP +LK+ G++ NF + ++
Sbjct: 192 ---PFITSLYCLGLFLGTIYSVPPFRLKRYPVAAFLIIATVRGFLLNFGV--------YY 240
Query: 241 AGQALFGTL---TPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAK 297
A +A G + + +T ++ L IAI D VEGDR + +L G
Sbjct: 241 ATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIA 300
Query: 298 WICVGAI---DITQISVAASLPTQIR 320
++ G + + I+VA +P R
Sbjct: 301 FLGSGLLIANYVAAIAVAFLMPQAFR 326
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLL----LAGLGLAGLLDVWAGHD 194
IND++D +ID IN+P RPIPSG IS + ++L + G ++ L+D W
Sbjct: 49 NVINDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYLLFILAAIVGFLISCLVDTWIPCT 108
Query: 195 FPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQAL-FGTLTPDI 253
+ + ++ Y+Y+ KLK IGN +G +AG G + +
Sbjct: 109 ------IVIFSDIILYLYAY---KLKSTPLIGNLTVGFMTGLCFIFAGYTFNEGLIIYES 159
Query: 254 IVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPE 294
+L I I D + +EGD A G ++ P+ +GP+
Sbjct: 160 YLLAFFALIMTTAREITKDIEDMEGDMAEGAKTFPILYGPK 200
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 102 GIVCGAAASGNFHWNLEDVAKS--IVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPI 159
G + G S ++ L+ + S +V +I +G GY IND YD EID IN+PYRPI
Sbjct: 21 GAIMGFLVSSQWYLELKGILLSALVVGLIAAG----GYV--INDVYDVEIDKINKPYRPI 74
Query: 160 PSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKL 219
PSG IS N+ L + G+ L+ LL+++A A+G IY A L
Sbjct: 75 PSGKISVNKAKALSIALFIIGIALSILLNIYA---LVIALVTAIG-----LIYYAK--DL 124
Query: 220 KQNGWIGNFALGASYISLPWWAGQALF 246
K+ G+ GN + + ++ G A F
Sbjct: 125 KKTGFYGNLLVATTTALSIFYGGLAFF 151
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 124 IVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGL 183
++ +++ C G TIND++D EID IN P RPIP GAI+ + GL +
Sbjct: 41 LIFLVVYFGCSAG--NTINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLII 98
Query: 184 AGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQ 243
A LL W+ F A+G L+++Y+ KLK +IGN + + P +
Sbjct: 99 ALLLG-WSA------FLFALGAYFLTFVYA---WKLKPLPFIGNVTVALLTAATPIYGAV 148
Query: 244 ALFGTLTPDII-VLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWI 299
G D+ L + + + I+ D + EGD+ +G ++LP+ G + + I
Sbjct: 149 ---GVGRIDLAGYLAICAFLVNVSREIMKDIEDFEGDKRLGARTLPIMIGKKKSGII 202
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
T ND++D EID IN P RP+P GA+S + + G LA L++ A
Sbjct: 54 NTANDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRA------- 106
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA--GQALFGTLTPDIIVL 256
F A L+++Y KLK +GN + A + P + G G L + +
Sbjct: 107 FVFATIAYFLTFLYG---WKLKPLPLVGNITVAALTAATPIYGAIGVGRIG-LAGYLAIC 162
Query: 257 TLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAASLP 316
L +++ I+ D + +EGD+A+G ++LP+ G + A I AI +A+ LP
Sbjct: 163 AFLVNVSR---EIMKDIEDIEGDKALGARTLPIIIGEKKAAIIA--AIFGFLTVIASFLP 217
Query: 317 TQIRIS 322
++ I
Sbjct: 218 VKVGIG 223
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND++D E+DA+N P RPIPSG +S G+G+A +++
Sbjct: 50 NAINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVIN-------RMC 102
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTL 258
+A S+L Y+YS +LK IGN + SY+ + A G + L L
Sbjct: 103 LAIAALNSVLLYLYS---WRLKGTPLIGNVMV--SYLVGSCFLFGAAVGQRPAPAVWLFL 157
Query: 259 LYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETA 296
L +A L I+ D + VEGD A+GL++LP+A+G A
Sbjct: 158 LAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVA 195
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 81 TNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQT 140
K K L+L + G + G S NF D+ KS++ + Y
Sbjct: 5 MEKLKTYLELIRVKNCITASIGGIIGYLISSNFEI---DILKSLLVF-FVVFFVCAYGNV 60
Query: 141 INDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFW 200
IND +D EID IN+P RP+PSG I NE +LL+ GL L+ ++++A
Sbjct: 61 INDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYA-------LI 113
Query: 201 LAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLY 260
+AV +L Y+Y+ K K IGNF +G S+ + G A G +++L L
Sbjct: 114 IAVINALFLYLYAKKYKKYKP---IGNFIIGYLTGSVFLFGGVA--GKNVMPVVILFLCS 168
Query: 261 SIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKW 298
++ G IV DF+ +EGD+ G+ SLP+ +G ++ +
Sbjct: 169 LLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYF 206
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 116 NLEDVA----KSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVIT 171
NL DV+ ++ +++ + Y +N +D EID +N+P P+ SG S +
Sbjct: 137 NLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVA 196
Query: 172 QIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSL-LSYIYSAPPLKLKQNGWIGNF-- 228
+ GL WA P L + L +Y + P L+ K++ +
Sbjct: 197 LVSAFAAMSFGLG-----WAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCI 251
Query: 229 -ALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLG-----IAIVNDFKSVEGDRAM 282
A+ A + L ++ F P + L+++ A + IA+ D +EGDR
Sbjct: 252 LAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIF 311
Query: 283 GLQSLPVAFGPETAKWICVGAIDI 306
G++S V G + WICVG +++
Sbjct: 312 GIKSFSVRLGQKKVFWICVGLLEM 335
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
+ G +ND++D EID +N P RPIPSG +S + +L AG+ A ++W
Sbjct: 47 ICGAGNVLNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVAAACFTNIWC-- 104
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLT--- 250
+A+ +L IY+A K K ++GN L +Y+S LFG
Sbjct: 105 -----LAIALVNVVLLIIYAA---KFKGIPFLGN--LSVAYLS----GSIFLFGGFLVGP 150
Query: 251 PDIIVLTLLYSIAGLGI---AIVNDFKSVEGDRAMGLQSLPVAFG 292
+V+ L++I G ++ D + +EGDR G ++LP+ G
Sbjct: 151 ESFLVMLPLFAITFFGTLARELLKDAEDIEGDRLGGARTLPMQIG 195
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 124 IVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGL 183
+V +I +G GY IND YD E+D IN+P RP+PSG I+ N I + + ++L +GL
Sbjct: 44 VVSLIAAG----GYV--INDVYDIEVDKINKPERPLPSGRIAVN--IARRFSIVLFAVGL 95
Query: 184 AGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQ 243
++ + G P F A+ +L Y Y+ LK+ G +GNF + + ++ G
Sbjct: 96 --IISIPLGL-IP--FGFALITIVLLYEYAR---SLKKLGLVGNFIVALTSALSAYYGGL 147
Query: 244 ALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWIC 300
A G+L + I+ T+ L V + +EGD+ G+ +L V G E + WI
Sbjct: 148 AS-GSLLGNFIIPTIYIFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLG-EKSTWII 202
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 135 TGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHD 194
T IND++D ID IN P RPIPSGA+S N + + L L GL ++
Sbjct: 48 TAAGNVINDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSVFTT------ 101
Query: 195 FPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDII 254
P +A+ +LL +Y+A +LK + GN A+ S+ + G D++
Sbjct: 102 -PLCMGIALVNALLLVLYAA---RLKSTPFFGNAAVAFLSASIFLFGGAYAGWHALLDML 157
Query: 255 VLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICVGAIDITQISVAAS 314
+ + +A L ++ D + +EGDRA G +L + G I A T ++AAS
Sbjct: 158 PIAAITFLAMLARELLKDAEDIEGDRAHGADTLAIRIGVRKTALI---AFACTAFAIAAS 214
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
+ G+ ++ND YD +ID IN+P+RPIPS IS + + +++ GL + L +++
Sbjct: 50 ICGFGNSLNDIYDLKIDRINKPFRPIPSKRISLTDAKVFSYSIMIFGL-IISLFNIYC-- 106
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDI 253
F +AV +++ Y+ K+N IGN + S+ + G A ++
Sbjct: 107 -----FLMAVLNAVVLQKYAKI---YKKNKIIGNMLVAYLTGSVFIFGGIA-----VGNV 153
Query: 254 IVLTLLYSIAGLGI---AIVNDFKSVEGDRAMGLQSLPVAFGPET 295
V L+S A + I+ D++ +EGD + SLP+ +G ++
Sbjct: 154 NVSLYLFSCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKS 198
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
++G IND++D +ID+IN P RPIPSG + E + ++L AG LA ++ G
Sbjct: 63 VSGAGNAINDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICG- 121
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDI 253
+A+ SLL +Y+ LK +GN ++G S+ + G ++FG
Sbjct: 122 ------LIALFNSLLLILYAK---TLKGTPLLGNLSIGYLTGSV-FLFGASVFGLEGLKT 171
Query: 254 IVLTLLYSIAGL-GIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWICV 301
+ + L + + IV D + +EGDR +LP+ G + A ++ V
Sbjct: 172 LFVLFLLAALAITAREIVKDIEDMEGDRLEDADTLPLRIGAKKAGYLAV 220
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 105 CGAAASGNF-------HWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYR 157
C A+ G F ++NLE V I I+ + G+ +ND YD +ID IN+P R
Sbjct: 15 CLMASFGAFIGGLIASYFNLEMVNNLIFASIVV-FLVCGFGNALNDIYDLKIDRINKPER 73
Query: 158 PIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPL 217
PIPS IS ++L+ GL ++ L ++ T F +AV S++ Y++
Sbjct: 74 PIPSKRISLTNARIFSYLLVFTGLCIS-LFNI-------TCFLMAVLNSIVLQQYAST-- 123
Query: 218 KLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGL-GIAIVNDFKSV 276
K+N IGN + S+ + G A+ G + D+ ++ L ++ + I+ D++ +
Sbjct: 124 -YKKNKIIGNLIVAYLTGSVFIFGGIAV-GNI--DVTIMLFLCALFAMWSREIIKDYEDI 179
Query: 277 EGDRAMGLQSLPVAFGPET 295
EGD + S+P+ G +
Sbjct: 180 EGDIQEKVISIPIKCGENS 198
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 101 WGIVCGAAASGNFHWNLED--VAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRP 158
+G G + F+ ++ D + SIV ++ G+ +ND YD +ID IN+P RP
Sbjct: 20 FGAFIGGLIASYFNISMIDNLILASIVVFLV-----CGFGNALNDIYDLKIDKINKPKRP 74
Query: 159 IPSGAISENEVITQIWVLLLAGLGL-AGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPL 217
IPS IS E +I+ LL +GL + ++ T F +AV S++ Y++
Sbjct: 75 IPSKRISLGE--ARIFSYLLVVMGLIISMFNI-------TCFLMAVLNSIVLQQYASTY- 124
Query: 218 KLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGL-GIAIVNDFKSV 276
K+N +GN + S+ + G A+ G + D+ ++ L ++ + I+ D++ +
Sbjct: 125 --KKNKIVGNLIVAYLTGSVFIFGGIAV-GNI--DVTIMLFLCALFAMWSREIIKDYEDI 179
Query: 277 EGDRAMGLQSLPVAFGPET 295
EGD + S+P+ G ++
Sbjct: 180 EGDIKEKVISIPIKCGEKS 198
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 116 NLEDVAKSIVCMIMSGPC----LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVIT 171
L D++ S + ++ G + Y +N YD EID IN+P+ P+ SG S +
Sbjct: 142 KLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVI 201
Query: 172 QIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAV-GGSLLSYIYSAPPLKLKQNGWIGNFAL 230
L G + W P I L V S +Y P L+ K+ ++ +
Sbjct: 202 ISAAFLALSFGFTWITGSW-----PLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCM 256
Query: 231 GASY-ISLPWWAGQALFGTLTPDII-----------VLTLLYSIAGLGIAIVNDFKSVEG 278
+++ ++LP + F + ++ L + LG+A+ D VEG
Sbjct: 257 ISTWALALP----ISYFHHMQTVVLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIPDVEG 312
Query: 279 DRAMGLQSLPVAFGPETAKWICVGAIDI 306
D+ G+ S V G + A WICV ++
Sbjct: 313 DKEHGIDSFAVRLGQKRAFWICVSFFEM 340
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 105 CGAAASGNF-------HWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYR 157
C A+ G F ++NL V I+ I+ + G+ +ND YD +ID IN+P R
Sbjct: 15 CLTASFGAFIGGLIASYFNLAMVDNLILASIVV-FLVCGFGNALNDIYDLKIDRINKPKR 73
Query: 158 PIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPL 217
PIPS I+ N + L++ GL ++ L ++ + F +AV S++ Y++
Sbjct: 74 PIPSKRITLNNAKVFSYSLVVMGLFIS-LFNI-------SCFLMAVLNSIVLQQYASTY- 124
Query: 218 KLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGL-GIAIVNDFKSV 276
K+N IGN + S+ + G A+ G + D+ ++ L ++ + I+ D++ +
Sbjct: 125 --KKNKIIGNLIVAYLTGSVFIFGGIAV-GNI--DVTIMLFLCALFAMWSREIIKDYEDI 179
Query: 277 EGDRAMGLQSLPVAFGPET---AKWICVGAI 304
EGD + S+P+ G + A ++ + AI
Sbjct: 180 EGDLKEKVISIPIKCGERSIYIAAFLLIFAI 210
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 105 CGAAASGNF-------HWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYR 157
C A+ G F ++NL V I+ I+ + G+ +ND YD +ID IN+P R
Sbjct: 15 CLTASFGAFIGGLIASYFNLATVYDLILASIVV-FLVCGFGNALNDIYDLKIDKINKPER 73
Query: 158 PIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPL 217
PIPS +S + ++L+ GL ++ L ++ F +AV S++ Y++
Sbjct: 74 PIPSKRLSLTDARVFSYLLVFVGLFIS-LFNMAC-------FLMAVLNSIVLQQYASTY- 124
Query: 218 KLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGL-GIAIVNDFKSV 276
K+N IGN + S+ + G A+ G + D+ ++ L ++ + I+ D++ +
Sbjct: 125 --KKNKIIGNLIVAYLTGSVFIFGGIAV-GNI--DVTIMLFLCALFAMWSREIIKDYEDI 179
Query: 277 EGDRAMGLQSLPVAFGPETA 296
EGD + S+P+ G ++
Sbjct: 180 EGDIQEKVISIPIKCGEKSV 199
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%)
Query: 128 IMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLL 187
+++ + Y +N D EID +N+PY P+ SG S N I ++A +
Sbjct: 142 VVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIA-----IVASFSIMSFW 196
Query: 188 DVWAGHDFPTIFWLAVGGSLLSYIYSA--PPLKLKQNGWIGN---FALGASYISLPWWAG 242
W +P +FW +L YS P L+ K+ + A+ A + + ++
Sbjct: 197 LGWIVGSWP-LFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLH 255
Query: 243 --QALFG---TLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETAK 297
+FG T +I T S + IA+ D +EGD+ G++S V G +
Sbjct: 256 IQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVF 315
Query: 298 WICVGAIDI 306
W CV + +
Sbjct: 316 WTCVTLLQM 324
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND++DRE+D IN+P R IP GA+S + VL + LA L V A I
Sbjct: 55 NAINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVVLFVGAAALAATLPVLA----VCI 110
Query: 199 FWLAVGGSL--LSYIYSAPPLKLKQNGWIGN--FALGASYISLPWWAGQALFGTLTPDII 254
L + G L Y+ P ++G F GA+ + P
Sbjct: 111 AALNLAGLLTYTQYLKGRPGAGNALVAYLGGSTFVFGAAAVGSPL------------AGG 158
Query: 255 VLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETA 296
VL L +++ ++ D + + GDRA GL++LPV G + A
Sbjct: 159 VLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVVVGHQRA 200
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND++DRE+D IN+P R IP GA+S + VL + LA L V A I
Sbjct: 55 NAINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVVLFVGAAALAATLPVLA----VCI 110
Query: 199 FWLAVGGSL--LSYIYSAPPLKLKQNGWIGN--FALGASYISLPWWAGQALFGTLTPDII 254
L + G L Y+ P ++G F GA+ + P
Sbjct: 111 AALNLAGLLTYTQYLKGRPGAGNALVAYLGGSTFVFGAAAVGSPL------------AGG 158
Query: 255 VLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPETA 296
VL L +++ ++ D + + GDRA GL++LPV G + A
Sbjct: 159 VLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVVVGHQRA 200
>sp|A8A9J7|DGGGP_IGNH4 Digeranylgeranylglyceryl phosphate synthase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=Igni_0416 PE=3 SV=2
Length = 303
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 28/224 (12%)
Query: 79 QETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYT 138
+ + K + L+L + + G++ GAA G +V + S +
Sbjct: 2 EASGKLRAYLELVRAHNLLGTVLGVIAGAALLG-------EVNVAAAIASASAAAVAAGG 54
Query: 139 QTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGHDFPTI 198
IND++D EID +N+P RPIPSG + E LL G L + P
Sbjct: 55 YAINDYFDVEIDKVNKPERPIPSGRVGAEEARKLALALLALGPLLGLAVG-------PLT 107
Query: 199 FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGAS------YISL--PWWAGQALFGTLT 250
A ++L Y YS LK+ G GN A+ S Y SL WAG+ T
Sbjct: 108 GAYAALNAVLMYYYSK---SLKKTGLPGNLAVSFSTASTLLYGSLATAEWAGEVARVLRT 164
Query: 251 PDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPE 294
II++ L ++A + V D+ GD+ G+++L V GP+
Sbjct: 165 IPIILMVFLMTLAREVVKGVEDYV---GDKEGGVKTLAVVKGPD 205
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 123 SIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLG 182
S V + ++ + G IND++D ID+IN P RPIPSG + E + + L G
Sbjct: 52 SSVLIFLAVFLVAGAGNAINDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTL 111
Query: 183 LAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIS-LPWWA 241
LA ++ P +A+ SL+ Y+ LK +GN ++G Y++ +
Sbjct: 112 LAFSIN-------PICGVIALFNSLVLIFYAK---TLKGTPLLGNLSIG--YLTGSSFLF 159
Query: 242 GQALFGTLTPDIIVLTLLYSIAGL-GIAIVNDFKSVEGDRAMGLQSLPVAFGPETAKWIC 300
G ++FG + + L + + IV D + +EGD+ G +LP+ G + A ++
Sbjct: 160 GASVFGLEGLKALFVLFLLAALAITAREIVKDIEDMEGDKMEGADTLPLRVGAKKASYLA 219
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 121 AKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAG 180
A IV ++ +G GY IND+YD E D + +P+RPI SG +S ++L G
Sbjct: 51 AALIVVLVAAG----GYV--INDYYDIETDMVAKPWRPIVSGRVSPGAARFYAYMLFTIG 104
Query: 181 LGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALG---ASYISL 237
L ++ + +F +F AV +LL + YS +K+ G GN + AS I
Sbjct: 105 L----IIALVTCPNF-IVFGFAVLNALLVHEYSR---WIKRTGLPGNIVIAFNSASTIVF 156
Query: 238 -PWWAGQALFGTLT-PDIIVLTLLYS-IAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGPE 294
+A + G + P + ++ +LY+ + LG V + V+GD G+ +L V FG
Sbjct: 157 GALYASCMIKGKVVLPSVALIPVLYAFLLVLGREFVKGIEDVKGDAIAGIGTLAVRFGVR 216
Query: 295 TA 296
TA
Sbjct: 217 TA 218
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 134 LTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLAGLGLAGLLDVWAGH 193
+T IND D EID IN P RPIP+G IS L + G+ +A L
Sbjct: 47 ITAGGNVINDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLC-- 104
Query: 194 DFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFAL----GASYISLPWWAG-QALFGT 248
+A+ S++ +Y+ ++LK+ +GN A+ G+ ++ +AG + L
Sbjct: 105 -----LAIAIINSVILIVYA---VRLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLVRN 156
Query: 249 LTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFG 292
L+ + +T L +IA ++ D + V+GD A G ++LP+ G
Sbjct: 157 LS--LAAITFLATIAR---ELLKDAEDVDGDAAGGARTLPMIVG 195
>sp|A9HKH7|COXX_GLUDA Protoheme IX farnesyltransferase OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=ctaB PE=3 SV=1
Length = 315
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 121 AKSIVCMIMSGPCLTGYTQTINDWYDREIDAI--NEPYRPIPSGAISENEVITQIWVLLL 178
A SI+C+ M+ +G IN WYDR+IDA+ RPIP G I +++ +
Sbjct: 59 AVSILCICMA----SGAAGAINMWYDRDIDAVMTRTARRPIPDGRIRDDQALG-----FG 109
Query: 179 AGLGLAGLLDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLK----QNGWIGNFALGASY 234
GL +A +L +W + F LA + IY+ + LK QN IG A GA
Sbjct: 110 IGLSVASVLLMWLAANALAAFILAFSIFFYAVIYT---MWLKRSTPQNIVIGG-AAGAFP 165
Query: 235 ISLPWWAGQALFGTLTPDIIVLTLLYS---IAGLGIAIVNDFKSVEGDRAMGLQSLPVAF 291
+ W A G L + + L++ L + D+ G+ LPV
Sbjct: 166 PMIGWAATTGSLGVLPVVMFAIVFLWTPPHFWSLSLYACKDYGRA------GIPMLPVVR 219
Query: 292 GPETAKW 298
G +W
Sbjct: 220 GARHTRW 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,699,411
Number of Sequences: 539616
Number of extensions: 5611666
Number of successful extensions: 12992
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 12804
Number of HSP's gapped (non-prelim): 345
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)