BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017605
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SD33|U183_ARATH UPF0183 protein At3g51130 OS=Arabidopsis thaliana GN=At3g51130 PE=2
SV=2
Length = 410
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/370 (81%), Positives = 337/370 (91%), Gaps = 5/370 (1%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MPICEAFA IEQQPNIYDVVHVKY+DE+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIF
Sbjct: 45 MPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIF 104
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+KRLQMRYATS+IGG STLATFVAVYALFGPTFPG+YDKER +Y LFYPGLSF FPIP
Sbjct: 105 DVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPN 164
Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
QY DCC D EA LPLEFPDGTTPVTCRVSIYD S+DKKVGVG L D+A P LP GSLY+
Sbjct: 165 QYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYM 224
Query: 181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
EEVH K G+EL+FTVG QH+PFGASPQDVWTELGRPCGIH KQVDQMVIHSASDPRP++T
Sbjct: 225 EEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTT 284
Query: 241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTS 299
+CGDYFYNY+TRGLDILFDG+THK+KKF++HTNYPGHADFNSYIKCNF+I G+D +
Sbjct: 285 ICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGAD----A 340
Query: 300 AEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNG 359
AE + NKITP+T W+QVKEILG+CG AAIQTQGSTSNPFGST+VYGYQN+AFEVMKNG
Sbjct: 341 AEANRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNG 400
Query: 360 YISTVTMFQS 369
+I+T+T+FQS
Sbjct: 401 HIATITLFQS 410
>sp|Q9VSH9|U183_DROME UPF0183 protein CG7083 OS=Drosophila melanogaster GN=CG7083 PE=2
SV=1
Length = 438
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 210/408 (51%), Gaps = 54/408 (13%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
M +A A I+ Q I V V Y D PL +DIII+ P G L FDP SQRL+ IE+F
Sbjct: 23 MHFSQAIAIIQSQVGIIKGVQVLYSDTTPLGVDIIINLPQDGVRLIFDPVSQRLKTIEVF 82
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
++K +++RY L + + FG T PGVYD + ++ L + GLSF FP+ +
Sbjct: 83 NMKLVKLRYFGVYFNSPEVLPSIEQIEHSFGATHPGVYDAAKQLFALHFRGLSFYFPVDS 142
Query: 121 Q----YADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVG 176
+ YA L F +G +PV ++S+Y GS ++ + + PSLP+
Sbjct: 143 KLHSGYAHGLSS------LVFLNGASPVVSKMSLYAGS--------NVLENRV-PSLPLS 187
Query: 177 ----SLYIEEV--------HAKLGEELHFTVGS------------QHIPFGASPQDVWTE 212
+Y+E H K + FT GS + + FG S +DV T
Sbjct: 188 CYHRQMYLESATVLRTAFGHTKGLKLKLFTEGSGRALEPRRQCFTRELLFGDSCEDVATS 247
Query: 213 LGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHT 272
LG P I K D+M IHS+S R + D F+NY+T G+D+LFD +T KKFI+HT
Sbjct: 248 LGAPNRIFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTCKKFILHT 307
Query: 273 NYPGHADFNSYIKCNF-IILGSDFAGTSAEVHSYKN-------KITPNTKWEQVKEILGD 324
NYPGH +FN Y +C F +L +D S H IT TKW+ + L
Sbjct: 308 NYPGHFNFNMYHRCEFQFLLQADHPSMSDSGHDLVTPTKQEHVNITAYTKWDAISSALAT 367
Query: 325 CGRAAIQTQGS---TSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS 369
R + + S T+NPFGSTF YGYQ++ FEVM N +I++VT++ +
Sbjct: 368 SERPVVLHRASSTNTANPFGSTFCYGYQDLIFEVMPNSHIASVTLYNT 415
>sp|O08654|CP070_RAT UPF0183 protein C16orf70 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 422
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 208/411 (50%), Gaps = 70/411 (17%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MP+ +A A +++ I V V Y ++ PL D+I++ G L FD ++QRL++IE++
Sbjct: 23 MPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEVY 82
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+ +++++Y + T + FG T PGVY+ ++ L + GLSF+F +
Sbjct: 83 DLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQL-- 140
Query: 121 QYADCCQDREAELP------------LEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKA 168
D E P L+ P G T R+ IY G+ SL D
Sbjct: 141 -------DSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGN--------SLQDTK 183
Query: 169 IAPSLPV----GSLYIEEVH-----------------AKLG----EELHFTVGSQHIPFG 203
AP +P+ G++Y E V A G + V + + FG
Sbjct: 184 -APMMPLSCFLGNVYAESVDVIRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFG 242
Query: 204 ASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTH 263
S QDV + LG P + K D+M IHS S + + C DYF+NY+T G+DILFD TH
Sbjct: 243 DSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTH 302
Query: 264 KIKKFIMHTNYPGHADFNSYIKCNFII---LGSDFAGTSAEVHSYKNKITPNTKWEQVKE 320
K+KKF++HTNYPGH +FN Y +C F I + + AG E+ T +KW+ ++E
Sbjct: 303 KVKKFVLHTNYPGHYNFNIYHRCEFKIPLAIKKENAGGQTEI------CTTYSKWDSIQE 356
Query: 321 ILGDCGRAAIQTQGSTS----NPFGSTFVYGYQNIAFEVMKNGYISTVTMF 367
+LG + S+S NPFGSTF +G Q + FEVM+N +I++VT++
Sbjct: 357 LLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLY 407
>sp|Q9BSU1|CP070_HUMAN UPF0183 protein C16orf70 OS=Homo sapiens GN=C16orf70 PE=1 SV=1
Length = 422
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 201/408 (49%), Gaps = 64/408 (15%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MP+ +A A +++ I V V Y ++ PL D+I++ G L FD ++QRL++IE+
Sbjct: 23 MPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLMFDAFNQRLKVIEVC 82
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+ +++++Y + T + FG T PGVY+ ++ L + GLSF+F +
Sbjct: 83 DLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQL-- 140
Query: 121 QYADCCQDREAELP------------LEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKA 168
D E P L+ P G T R+ IY G+ SL D
Sbjct: 141 -------DSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGN--------SLQDTK 183
Query: 169 IAPSLPV----GSLYIEEVHA---------------------KLGEELHFTVGSQHIPFG 203
AP +P+ G++Y E V L + V + + FG
Sbjct: 184 -APMMPLSCFLGNVYAESVDVLRDGTGPAGLRLRLLAAGCGPGLLADAKMRVFERSVYFG 242
Query: 204 ASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTH 263
S QDV + LG P + K D+M IHS S + + C DYF+NY+T G+DILFD TH
Sbjct: 243 DSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTH 302
Query: 264 KIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILG 323
K+KKF++HTNYPGH +FN Y +C F I A T +KW+ ++E+LG
Sbjct: 303 KVKKFVLHTNYPGHYNFNIYHRCEFKI---PLAIKKENADGQTETCTTYSKWDNIQELLG 359
Query: 324 DCGRAAIQTQGSTS----NPFGSTFVYGYQNIAFEVMKNGYISTVTMF 367
+ S+S NPFGSTF +G Q + FEVM+N +I++VT++
Sbjct: 360 HPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLY 407
>sp|Q922R1|CP070_MOUSE UPF0183 protein C16orf70 homolog OS=Mus musculus PE=2 SV=2
Length = 422
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 205/402 (50%), Gaps = 52/402 (12%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MP+ +A A +++ I V V Y ++ PL D+I++ G L FD ++QRL++IE+
Sbjct: 23 MPLAQAVAILQKHCRIIRNVQVLYSEQSPLSHDLILNLTQDGITLLFDAFNQRLKVIEVC 82
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
++ +++++Y + T + FG T PGVY+ ++ L + GLSF+F +
Sbjct: 83 ELTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSTEQLFHLNFRGLSFSFQL-- 140
Query: 121 QYADCCQDREAELP------------LEFPDGTTPVTCRVSIYDGSA--DKKVGVGSL-- 164
D E P L+ P G T R+ IY G++ D K V L
Sbjct: 141 -------DSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGNSLQDTKAPVMPLSC 191
Query: 165 -FDKAIAPSLPV-------GSLYIEEVHAKLG----EELHFTVGSQHIPFGASPQDVWTE 212
A S+ V L + + A G + V + + FG S QDV +
Sbjct: 192 FLGNVYAESVDVLRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSM 251
Query: 213 LGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHT 272
LG P + K D+M IHS S + + C DYF+NY+T G+DILFD THK+KKF++HT
Sbjct: 252 LGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHT 311
Query: 273 NYPGHADFNSYIKCNFII---LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAA 329
NYPGH +FN Y +C F I + + AG E+ T +KW+ ++E+LG
Sbjct: 312 NYPGHYNFNIYHRCEFKIPLAIKKENAGGQTEI------CTTYSKWDSIQELLGHPVEKP 365
Query: 330 IQTQGSTS----NPFGSTFVYGYQNIAFEVMKNGYISTVTMF 367
+ S+S NPFGSTF +G Q + FEVM+N +I++VT++
Sbjct: 366 VVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLY 407
>sp|P34692|U183_CAEEL UPF0183 protein T01G9.2 OS=Caenorhabditis elegans GN=T01G9.2 PE=1
SV=3
Length = 422
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 191/391 (48%), Gaps = 39/391 (9%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MPI + A I+Q P + V +KY ++P DIII G L FD SQ ++LIE+
Sbjct: 41 MPINQCIAMIQQHPRMLTKVELKYSKKDPFYQDIIIYIGSTGIRLYFDGLSQLIKLIEVD 100
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
++ + + Y ++ + +AT V FG T PG YD + ++Y+ +PGLSF FP
Sbjct: 101 NLSMITLTYNDTIFSDPNNMATLDRVNEFFGSTHPGSYDDKHNIYVQSWPGLSFCFPYGG 160
Query: 121 QYADCCQDREA----ELPLEFPDGTTPVTCRVSIYDG-SADKKVGVGSLFDKAIAPSLPV 175
+ ++ + R L++ + P ++SIY G + + V + F +
Sbjct: 161 ENSNL-EVRPGFGGNLRSLKYDANSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTR 219
Query: 176 GSLYIEEVHAKLGEELHF--------------TVGSQHIPFGASPQDVWTELGRPCGIHQ 221
I E +G ++ F + ++ I FG S DV + LG P +
Sbjct: 220 KVEAIWENGNIVGIDIQFDTQNGRIVDGEYDVSTYTRQIYFGDSVSDVQSILGAPTKVFY 279
Query: 222 KQVDQMVIHSASDPRPRSTLCG--DYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHAD 279
K D+M IH + TL G ++F+NY+ GLDILFD + ++ KF++HTN PGH D
Sbjct: 280 KSDDKMKIHRGLH---KETLYGPPNFFFNYFVMGLDILFDFVSKRVVKFVLHTNAPGHCD 336
Query: 280 FNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKE-ILGDCG--RAAIQTQGST 336
F Y +CNF I +D + +I ++K+++ + D R + +
Sbjct: 337 FGMYSRCNFSIFLND----------KQYEIRTDSKFDEFSHAFMNDSNPPRPVVLAR-QE 385
Query: 337 SNPFGSTFVYGYQNIAFEVMKNGYISTVTMF 367
PFGSTF YG + I E +NG++++VT++
Sbjct: 386 QQPFGSTFCYGIKQIIVERTENGFLTSVTIY 416
>sp|P15238|RPC_BP163 Repressor protein C OS=Rhizobium phage 16-3 GN=C PE=1 SV=4
Length = 263
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 209 VWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYN 248
VW EL R GI ++++ QM+ + DP ++L G Y
Sbjct: 53 VWRELARELGIDEQEMRQMMTEAGRDPEKVTSLAGLRKYR 92
>sp|Q9D2X5|SCC4_MOUSE MAU2 chromatid cohesion factor homolog OS=Mus musculus GN=Mau2 PE=2
SV=3
Length = 619
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 249 YYTRGLDILFDGQTHKIKKFIMHTNYPGHA-DFNSYIKCNFIILGSDF 295
+Y RGL F G+ ++ K+F+ T +A D N C+ ++LG F
Sbjct: 468 FYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIF 515
>sp|Q9Y6X3|SCC4_HUMAN MAU2 chromatid cohesion factor homolog OS=Homo sapiens GN=MAU2 PE=1
SV=2
Length = 613
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 249 YYTRGLDILFDGQTHKIKKFIMHTNYPGHA-DFNSYIKCNFIILGSDF 295
+Y RGL F G+ ++ K+F+ T +A D N C+ ++LG F
Sbjct: 462 FYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIF 509
>sp|B1H1Z8|SCC4_XENTR MAU2 chromatid cohesion factor homolog OS=Xenopus tropicalis
GN=mau2 PE=2 SV=1
Length = 604
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 249 YYTRGLDILFDGQTHKIKKFIMHTNYPGHA-DFNSYIKCNFIILGSDF 295
+Y RGL F G+ ++ K+F+ T +A D N C+ ++LG F
Sbjct: 453 FYIRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIF 500
>sp|B4ZIX8|SCC4_XENLA MAU2 chromatid cohesion factor homolog OS=Xenopus laevis GN=mau2
PE=1 SV=1
Length = 607
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 249 YYTRGLDILFDGQTHKIKKFIMHTNYPGHA-DFNSYIKCNFIILGSDF 295
+Y RGL F G+ ++ K+F+ T +A D N C+ ++LG F
Sbjct: 456 FYIRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIF 503
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 32.0 bits (71), Expect = 7.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 119 PAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDK 167
P + CQDRE P GTT V C ++I D K G DK
Sbjct: 609 PCRNGGTCQDRENAYICTCPKGTTGVNCEINI-DDCKRKPCDYGKCIDK 656
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,935,725
Number of Sequences: 539616
Number of extensions: 6849872
Number of successful extensions: 12966
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 12939
Number of HSP's gapped (non-prelim): 16
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)