Query 017605
Match_columns 369
No_of_seqs 117 out of 152
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 17:07:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017605.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017605hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2zkmx3 b.55.1.1 (X:11-141) Ph 24.6 22 0.0016 27.5 3.0 43 21-63 13-55 (131)
2 d1nzia1 b.23.1.1 (A:1-117) Com 14.0 49 0.0036 23.7 2.7 20 273-294 12-31 (117)
3 d2qqma3 b.23.1.1 (A:156-263) M 13.5 65 0.0047 22.4 3.2 21 273-295 7-27 (108)
4 d2cy5a1 b.55.1.2 (A:31-159) EP 11.9 1.3E+02 0.0098 22.0 4.8 61 2-77 24-84 (129)
5 d1zoqc1 a.153.1.1 (C:2065-2111 11.0 32 0.0023 22.2 0.5 13 4-16 20-32 (47)
6 d1o7za_ d.9.1.1 (A:) IP-10/CXC 10.5 1.8E+02 0.013 19.4 4.5 41 13-53 12-52 (61)
7 d2doea1 a.159.2.1 (A:784-853) 10.4 55 0.004 22.4 1.8 20 308-327 24-43 (70)
8 d3duea1 d.98.2.1 (A:20-145) Pu 9.2 1.4E+02 0.01 22.2 3.9 45 5-55 79-123 (126)
9 d1szba1 b.23.1.1 (A:3-123) Man 8.9 95 0.0069 22.1 2.8 25 268-294 12-36 (121)
10 d2k54a1 d.17.4.29 (A:1-123) Un 8.8 1E+02 0.0074 22.2 2.9 16 351-367 97-112 (123)
No 1
>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.62 E-value=22 Score=27.49 Aligned_cols=43 Identities=21% Similarity=0.427 Sum_probs=35.0
Q ss_pred EEEecCCCCCCcceEEEcCCCCeEEEecCCCCeEEEEEEeeCC
Q 017605 21 HVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIK 63 (369)
Q Consensus 21 ~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~ 63 (369)
=++|++.+-...++.+.|.++|..|+..+..++-..|+|-+.+
T Consensus 13 f~K~~~~~~~~~~~~frlD~~g~~L~W~~~~k~~~~l~i~~I~ 55 (131)
T d2zkmx3 13 FIKWDDETTVASPVILRVDPKGYYLYWTYQSKEMEFLDITSIR 55 (131)
T ss_dssp EEEECTTTCCEEEEEEEECTTSCEEEEEETTSCEEEEEGGGEE
T ss_pred EEEEcCCCCccceEEEEECCCCCEEEEECCCCceeEEEeccee
Confidence 3678888878889999999999999998878777766655554
No 2
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.01 E-value=49 Score=23.65 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=15.6
Q ss_pred CCCCccCcCceeeeeeEEeccC
Q 017605 273 NYPGHADFNSYIKCNFIILGSD 294 (369)
Q Consensus 273 N~PG~~~Fn~Y~RC~w~I~~~~ 294 (369)
|+|+.|. ....|.|.|...+
T Consensus 12 ~yP~~Yp--~~~~C~w~I~~p~ 31 (117)
T d1nzia1 12 NYPQAYP--SEVEKSWDIEVPE 31 (117)
T ss_dssp TTTSCCC--SSEEEEEEEECCT
T ss_pred CCCCCCC--CCCcEEEEEEcCC
Confidence 7787664 5578999999865
No 3
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.49 E-value=65 Score=22.40 Aligned_cols=21 Identities=14% Similarity=0.651 Sum_probs=16.0
Q ss_pred CCCCccCcCceeeeeeEEeccCC
Q 017605 273 NYPGHADFNSYIKCNFIILGSDF 295 (369)
Q Consensus 273 N~PG~~~Fn~Y~RC~w~I~~~~~ 295 (369)
|+|+.|.=| ..|.|.|.....
T Consensus 7 ~yP~~Y~~~--~~C~w~I~~p~~ 27 (108)
T d2qqma3 7 GFPEKYPNS--LECTYIVFAPKM 27 (108)
T ss_dssp TTTSCCCSS--CEEEEEEECGGG
T ss_pred CCCCCCCCC--CeEEEEEEeCCC
Confidence 888876644 479999998753
No 4
>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.86 E-value=1.3e+02 Score=22.04 Aligned_cols=61 Identities=10% Similarity=0.213 Sum_probs=39.4
Q ss_pred CHHHHHHHHhcCCcccceEEEEecCCCCCCcceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcceEEEccccccCC
Q 017605 2 PICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGS 77 (369)
Q Consensus 2 ~l~~vl~~Lk~~~~~~~~v~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~~~~L~Y~~~~~~~p 77 (369)
.+.+||..|+.... ....-..++.|.+...||+| .|+.++.+ ++-+.+.+ ++|++...+.+
T Consensus 24 ~~~dAi~~l~~~~~----------~~~~~~q~v~L~Vs~~gi~l-~D~~t~~~--l~~~~i~~--Is~c~~~~~~~ 84 (129)
T d2cy5a1 24 TVEDASRKLAVMDS----------QGRVWAQEMLLRVSPSQVTL-LDPVSKEE--LESYPLDA--IVRCDAVMPRG 84 (129)
T ss_dssp SHHHHHHHHHHHHH----------TTCCCCEEEEEEECSSEEEE-ECTTTCCE--EEEEEGGG--EEEEEEECCSS
T ss_pred HHHHHHHHHHHHHh----------hcCccCceEEEEEeCCeEEE-EeCCCCce--eeccccce--EEEEeecCCCC
Confidence 46788888763111 11112468899999999999 59988776 44455553 57777665543
No 5
>d1zoqc1 a.153.1.1 (C:2065-2111) Nuclear receptor coactivator CBP/p300 ibid domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.97 E-value=32 Score=22.16 Aligned_cols=13 Identities=8% Similarity=0.394 Sum_probs=10.8
Q ss_pred HHHHHHHhcCCcc
Q 017605 4 CEAFASIEQQPNI 16 (369)
Q Consensus 4 ~~vl~~Lk~~~~~ 16 (369)
.|+|+|||++|+.
T Consensus 20 qQvL~ILksNP~l 32 (47)
T d1zoqc1 20 QQVLNILKSNPQL 32 (47)
T ss_dssp HHHHHHHHTCHHH
T ss_pred HHHHHHHHcCHHH
Confidence 5899999998864
No 6
>d1o7za_ d.9.1.1 (A:) IP-10/CXCL10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.48 E-value=1.8e+02 Score=19.40 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=33.4
Q ss_pred CCcccceEEEEecCCCCCCcceEEEcCCCCeEEEecCCCCe
Q 017605 13 QPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQR 53 (369)
Q Consensus 13 ~~~~~~~v~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QR 53 (369)
++..+.+|+|......=-...|++.|..+|-..=-||..+.
T Consensus 12 ~p~~I~~lev~p~g~~C~~~EVIaTLK~ng~~vCLdP~a~~ 52 (61)
T d1o7za_ 12 NPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKA 52 (61)
T ss_dssp CTTTEEEEEEECCCSSCSSCEEEEEETTTSCEEEECSSSHH
T ss_pred ChhHeeEEEEEcCCCCCCCcEEEEEeecCCcEEecCCCCHH
Confidence 45678899999977776688999999989988888886543
No 7
>d2doea1 a.159.2.1 (A:784-853) Transcription elongation regulator 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.45 E-value=55 Score=22.41 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=17.1
Q ss_pred ccCCCCChhHhHhhhCCCCC
Q 017605 308 KITPNTKWEQVKEILGDCGR 327 (369)
Q Consensus 308 ~it~~~~~~~i~~~l~~~~~ 327 (369)
.|++.+.|+++...|..++|
T Consensus 24 ~i~~~s~W~~~~~~~~~DpR 43 (70)
T d2doea1 24 HLDSQSRWSKVKDKVESDPR 43 (70)
T ss_dssp TCCTTCCHHHHHHHHTTSTH
T ss_pred CCCCCCCHHHHHHHhccCHH
Confidence 48999999999999976655
No 8
>d3duea1 d.98.2.1 (A:20-145) Putative periplasmic protein BVU2987 {Bacteroides vulgatus [TaxId: 821]}
Probab=9.19 E-value=1.4e+02 Score=22.21 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=30.3
Q ss_pred HHHHHHhcCCcccceEEEEecCCCCCCcceEEEcCCCCeEEEecCCCCeEE
Q 017605 5 EAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLR 55 (369)
Q Consensus 5 ~vl~~Lk~~~~~~~~v~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QRL~ 55 (369)
.|.+.++++ ||...|.--+.+ ...-.|.| ++|+.|.||...+-|+
T Consensus 79 ~V~~~i~~~---yp~~~I~~iek~--~~~Y~vel-~n~~el~fd~~G~~i~ 123 (126)
T d3duea1 79 AIKKYVATN---YPDAKMLKIERD--KHDYEVKL-SNGWEIKFDMQFNVID 123 (126)
T ss_dssp HHHHHHHHH---STTCCEEEEEEC--SSEEEEEE-TTSCEEEEETTCCEEE
T ss_pred HHHHHHHHH---CCCCEEEEEEEc--CCeEEEEe-cCCeEEEECCCCCEEe
Confidence 466777763 554444433333 45577777 5789999999988876
No 9
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.87 E-value=95 Score=22.13 Aligned_cols=25 Identities=8% Similarity=0.236 Sum_probs=18.2
Q ss_pred EEeeeCCCCccCcCceeeeeeEEeccC
Q 017605 268 FIMHTNYPGHADFNSYIKCNFIILGSD 294 (369)
Q Consensus 268 ~ILHtN~PG~~~Fn~Y~RC~w~I~~~~ 294 (369)
.|-.=|+|+.|.=| ..|.|.|....
T Consensus 12 ~i~SP~yP~~Yp~~--~~C~W~I~~p~ 36 (121)
T d1szba1 12 RLASPGFPGEYAND--QERRWTLTAPP 36 (121)
T ss_dssp EEECTTTTSCCCSS--CEEEEEEECCT
T ss_pred EEeCCCCCCCCCCC--CeEEEEEEeCC
Confidence 44455889877644 57999999865
No 10
>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=8.81 E-value=1e+02 Score=22.15 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=12.7
Q ss_pred eEEEEEcCCceEEEEEe
Q 017605 351 IAFEVMKNGYISTVTMF 367 (369)
Q Consensus 351 iIfEV~~n~~IasVtlf 367 (369)
.+||| +||-|+.+|.+
T Consensus 97 ~vf~~-~dGkI~r~~f~ 112 (123)
T d2k54a1 97 CIYEV-ENGRIAKAWFK 112 (123)
T ss_dssp EEEEE-ETTEEEEEEEE
T ss_pred EEEEE-ECCEEEEEEEc
Confidence 46887 79999999853
Done!