Query 017607
Match_columns 369
No_of_seqs 489 out of 3087
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 17:09:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 3.1E-65 1.1E-69 486.9 26.2 272 78-355 19-291 (294)
2 3adn_A Spermidine synthase; am 100.0 4.4E-56 1.5E-60 426.6 21.1 276 74-356 15-292 (294)
3 1xj5_A Spermidine synthase 1; 100.0 4.6E-54 1.6E-58 419.3 32.4 297 43-355 35-331 (334)
4 2i7c_A Spermidine synthase; tr 100.0 3.7E-53 1.3E-57 403.9 31.1 280 53-355 3-282 (283)
5 2b2c_A Spermidine synthase; be 100.0 2.3E-53 7.7E-58 411.3 27.3 299 49-353 2-313 (314)
6 2o07_A Spermidine synthase; st 100.0 3.2E-53 1.1E-57 408.5 28.0 288 48-355 15-302 (304)
7 1iy9_A Spermidine synthase; ro 100.0 3.9E-53 1.3E-57 402.3 28.1 272 54-353 3-274 (275)
8 2pt6_A Spermidine synthase; tr 100.0 3.7E-51 1.3E-55 396.9 29.7 281 51-355 39-320 (321)
9 1inl_A Spermidine synthase; be 100.0 4.6E-51 1.6E-55 391.9 29.2 287 44-355 8-295 (296)
10 3bwc_A Spermidine synthase; SA 100.0 3.6E-50 1.2E-54 387.0 28.6 286 49-354 13-302 (304)
11 1uir_A Polyamine aminopropyltr 100.0 2.5E-49 8.6E-54 382.8 30.3 287 52-361 3-294 (314)
12 1mjf_A Spermidine synthase; sp 100.0 1.6E-49 5.4E-54 378.4 25.8 271 53-355 2-280 (281)
13 2cmg_A Spermidine synthase; tr 100.0 1E-48 3.5E-53 369.6 18.4 250 78-356 9-259 (262)
14 3c6k_A Spermine synthase; sper 100.0 3.9E-46 1.3E-50 365.2 24.2 225 78-308 143-381 (381)
15 2qfm_A Spermine synthase; sper 100.0 1.4E-41 4.9E-46 331.7 25.1 227 74-306 119-362 (364)
16 3gjy_A Spermidine synthase; AP 100.0 2.3E-32 7.7E-37 263.6 21.6 239 95-343 29-283 (317)
17 3orh_A Guanidinoacetate N-meth 99.6 6E-15 2E-19 136.0 13.5 125 123-256 44-169 (236)
18 3duw_A OMT, O-methyltransferas 99.6 3.7E-14 1.3E-18 128.4 17.2 151 142-304 58-221 (223)
19 3tfw_A Putative O-methyltransf 99.6 3.3E-14 1.1E-18 131.9 17.1 105 142-256 63-169 (248)
20 3c3y_A Pfomt, O-methyltransfer 99.6 1.8E-14 6.1E-19 132.8 12.9 150 141-305 69-236 (237)
21 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.5E-14 1.2E-18 129.5 13.8 114 142-259 34-152 (218)
22 1sui_A Caffeoyl-COA O-methyltr 99.6 2.8E-14 9.6E-19 132.6 13.0 106 141-256 78-189 (247)
23 3p9n_A Possible methyltransfer 99.5 6.3E-14 2.2E-18 123.9 14.2 110 141-258 43-154 (189)
24 3ntv_A MW1564 protein; rossman 99.5 6.6E-14 2.3E-18 128.3 14.7 103 142-255 71-174 (232)
25 1yzh_A TRNA (guanine-N(7)-)-me 99.5 7.2E-14 2.5E-18 126.1 14.7 114 142-259 41-158 (214)
26 2fca_A TRNA (guanine-N(7)-)-me 99.5 9.6E-14 3.3E-18 125.8 15.4 114 142-259 38-155 (213)
27 3c3p_A Methyltransferase; NP_9 99.5 3.5E-14 1.2E-18 127.6 11.9 146 142-305 56-209 (210)
28 3dr5_A Putative O-methyltransf 99.5 7.2E-14 2.5E-18 127.7 13.8 103 145-256 59-162 (221)
29 3r3h_A O-methyltransferase, SA 99.5 4.1E-14 1.4E-18 131.0 11.0 105 142-256 60-169 (242)
30 4gek_A TRNA (CMO5U34)-methyltr 99.5 1E-13 3.4E-18 130.1 12.3 108 140-256 68-177 (261)
31 3tr6_A O-methyltransferase; ce 99.5 3.2E-13 1.1E-17 122.2 15.2 105 142-256 64-173 (225)
32 2ozv_A Hypothetical protein AT 99.5 2.6E-13 8.9E-18 126.8 13.9 131 141-279 35-187 (260)
33 1dus_A MJ0882; hypothetical pr 99.5 2.3E-12 7.7E-17 112.7 18.5 134 129-279 42-175 (194)
34 2avd_A Catechol-O-methyltransf 99.5 4.2E-13 1.4E-17 121.8 13.8 106 141-256 68-178 (229)
35 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.4E-13 8.3E-18 125.4 12.3 118 142-259 46-170 (235)
36 1zx0_A Guanidinoacetate N-meth 99.5 2E-13 7E-18 124.9 11.7 110 141-256 59-169 (236)
37 2b3t_A Protein methyltransfera 99.5 8.3E-15 2.8E-19 137.7 2.0 230 51-303 22-274 (276)
38 3cbg_A O-methyltransferase; cy 99.5 1E-12 3.4E-17 120.5 15.6 147 142-304 72-231 (232)
39 3u81_A Catechol O-methyltransf 99.5 3.2E-13 1.1E-17 122.5 12.0 108 142-257 58-170 (221)
40 4hg2_A Methyltransferase type 99.5 9.2E-14 3.2E-18 130.1 8.4 99 141-258 38-136 (257)
41 3mti_A RRNA methylase; SAM-dep 99.5 1.6E-12 5.3E-17 114.1 15.4 110 141-257 21-135 (185)
42 3lpm_A Putative methyltransfer 99.4 1.4E-12 4.9E-17 121.2 15.7 127 142-277 49-191 (259)
43 3e05_A Precorrin-6Y C5,15-meth 99.4 9.3E-13 3.2E-17 117.6 13.6 120 141-277 39-158 (204)
44 2hnk_A SAM-dependent O-methylt 99.4 5.5E-13 1.9E-17 122.4 12.3 148 142-305 60-231 (239)
45 2frn_A Hypothetical protein PH 99.4 9.9E-13 3.4E-17 124.1 14.2 145 141-301 124-271 (278)
46 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.1E-12 3.7E-17 113.8 13.0 105 141-258 24-128 (178)
47 1xdz_A Methyltransferase GIDB; 99.4 2.8E-12 9.6E-17 117.8 16.1 149 141-305 69-219 (240)
48 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.2E-12 4.1E-17 120.8 12.7 118 142-259 49-175 (246)
49 2fhp_A Methylase, putative; al 99.4 2.5E-13 8.5E-18 118.8 7.3 109 142-259 44-156 (187)
50 3fpf_A Mtnas, putative unchara 99.4 9.7E-13 3.3E-17 125.3 11.7 103 139-257 119-222 (298)
51 3g89_A Ribosomal RNA small sub 99.4 4.2E-12 1.4E-16 118.1 15.6 149 141-305 79-229 (249)
52 2igt_A SAM dependent methyltra 99.4 2.4E-12 8E-17 124.9 14.4 111 142-256 153-271 (332)
53 3njr_A Precorrin-6Y methylase; 99.4 1.3E-11 4.3E-16 111.1 18.3 117 141-277 54-170 (204)
54 2esr_A Methyltransferase; stru 99.4 4.5E-13 1.6E-17 116.7 8.2 108 141-258 30-139 (177)
55 3dlc_A Putative S-adenosyl-L-m 99.4 1.6E-12 5.3E-17 116.1 11.5 105 142-256 43-147 (219)
56 2ift_A Putative methylase HI07 99.4 7.9E-13 2.7E-17 118.6 9.3 109 142-258 53-164 (201)
57 2gpy_A O-methyltransferase; st 99.4 1.5E-12 5.1E-17 118.8 11.1 105 142-256 54-159 (233)
58 3eey_A Putative rRNA methylase 99.4 3.2E-12 1.1E-16 113.2 12.7 113 141-257 21-139 (197)
59 4dzr_A Protein-(glutamine-N5) 99.4 8.1E-13 2.8E-17 117.6 8.3 152 141-305 29-205 (215)
60 3f4k_A Putative methyltransfer 99.4 2.6E-12 9E-17 118.2 11.8 106 141-257 45-150 (257)
61 2b78_A Hypothetical protein SM 99.4 1.3E-11 4.6E-16 121.8 17.6 132 142-279 212-350 (385)
62 3evz_A Methyltransferase; NYSG 99.4 2.2E-12 7.6E-17 117.0 11.0 127 141-277 54-196 (230)
63 3kkz_A Uncharacterized protein 99.4 3.2E-12 1.1E-16 118.8 12.2 106 141-257 45-150 (267)
64 1ws6_A Methyltransferase; stru 99.4 9.3E-13 3.2E-17 113.3 8.0 104 142-258 41-148 (171)
65 1nv8_A HEMK protein; class I a 99.4 1.1E-12 3.7E-17 124.4 8.9 193 51-258 36-250 (284)
66 2fpo_A Methylase YHHF; structu 99.4 2.4E-12 8.3E-17 115.5 10.6 106 142-258 54-161 (202)
67 3dtn_A Putative methyltransfer 99.4 5.5E-12 1.9E-16 114.6 12.8 105 141-256 43-147 (234)
68 3mb5_A SAM-dependent methyltra 99.4 4.1E-12 1.4E-16 117.2 11.8 120 141-279 92-215 (255)
69 3hem_A Cyclopropane-fatty-acyl 99.3 4.7E-12 1.6E-16 120.0 12.5 108 141-257 71-183 (302)
70 3jwg_A HEN1, methyltransferase 99.3 6.5E-12 2.2E-16 113.0 12.0 112 141-256 28-140 (219)
71 1l3i_A Precorrin-6Y methyltran 99.3 7.2E-11 2.4E-15 102.8 17.9 121 141-279 32-153 (192)
72 3a27_A TYW2, uncharacterized p 99.3 1.2E-11 4.2E-16 116.3 13.8 145 141-300 118-264 (272)
73 3jwh_A HEN1; methyltransferase 99.3 7.3E-12 2.5E-16 112.7 11.7 111 142-256 29-140 (217)
74 1ve3_A Hypothetical protein PH 99.3 5.1E-12 1.7E-16 113.8 10.4 106 141-257 37-142 (227)
75 4dcm_A Ribosomal RNA large sub 99.3 2.2E-11 7.4E-16 120.0 15.7 127 142-279 222-349 (375)
76 1nt2_A Fibrillarin-like PRE-rR 99.3 2.4E-11 8.2E-16 110.0 14.8 103 141-256 56-160 (210)
77 1jsx_A Glucose-inhibited divis 99.3 5.9E-12 2E-16 112.2 10.6 102 142-258 65-166 (207)
78 2bm8_A Cephalosporin hydroxyla 99.3 2.7E-12 9.4E-17 118.3 8.3 100 142-257 81-187 (236)
79 3grz_A L11 mtase, ribosomal pr 99.3 9E-12 3.1E-16 111.1 11.4 100 141-256 59-158 (205)
80 3mgg_A Methyltransferase; NYSG 99.3 8.6E-12 3E-16 116.2 11.7 107 141-257 36-142 (276)
81 1vl5_A Unknown conserved prote 99.3 8.3E-12 2.8E-16 115.5 11.5 104 141-256 36-139 (260)
82 3ofk_A Nodulation protein S; N 99.3 5.7E-12 2E-16 113.1 9.9 127 141-279 50-181 (216)
83 1g8a_A Fibrillarin-like PRE-rR 99.3 4.6E-11 1.6E-15 108.3 15.7 103 141-256 72-177 (227)
84 3dli_A Methyltransferase; PSI- 99.3 1.2E-11 4.2E-16 113.0 11.8 103 141-259 40-142 (240)
85 3sm3_A SAM-dependent methyltra 99.3 2.8E-11 9.4E-16 109.2 14.0 111 141-256 29-140 (235)
86 2nxc_A L11 mtase, ribosomal pr 99.3 2.5E-11 8.4E-16 112.9 13.9 134 141-303 119-253 (254)
87 3g07_A 7SK snRNA methylphospha 99.3 8.3E-12 2.8E-16 118.3 10.8 115 142-257 46-220 (292)
88 3g5l_A Putative S-adenosylmeth 99.3 1.6E-11 5.4E-16 113.0 12.3 105 142-260 44-148 (253)
89 4htf_A S-adenosylmethionine-de 99.3 9.6E-12 3.3E-16 116.7 11.1 108 141-258 67-174 (285)
90 1yb2_A Hypothetical protein TA 99.3 3.3E-11 1.1E-15 113.1 14.6 102 141-258 109-212 (275)
91 1pjz_A Thiopurine S-methyltran 99.3 2.2E-12 7.7E-17 115.8 6.3 107 141-252 21-135 (203)
92 3lbf_A Protein-L-isoaspartate 99.3 1.3E-11 4.5E-16 110.3 10.8 100 141-258 76-175 (210)
93 2ex4_A Adrenal gland protein A 99.3 7.2E-12 2.5E-16 114.7 9.3 106 142-256 79-184 (241)
94 2b25_A Hypothetical protein; s 99.3 9.1E-12 3.1E-16 120.2 10.3 123 141-276 104-234 (336)
95 1nkv_A Hypothetical protein YJ 99.3 1.2E-11 4.1E-16 113.7 10.6 105 141-256 35-139 (256)
96 3g5t_A Trans-aconitate 3-methy 99.3 1.1E-11 3.8E-16 117.3 10.5 108 141-255 35-147 (299)
97 3dh0_A SAM dependent methyltra 99.3 9.1E-12 3.1E-16 111.8 9.4 115 129-256 27-142 (219)
98 3e23_A Uncharacterized protein 99.3 3.4E-11 1.2E-15 107.7 13.1 146 141-304 42-201 (211)
99 3bus_A REBM, methyltransferase 99.3 2.8E-11 9.4E-16 112.5 12.8 107 141-257 60-166 (273)
100 4dmg_A Putative uncharacterize 99.3 5.8E-11 2E-15 117.6 15.9 122 142-271 214-340 (393)
101 2yxd_A Probable cobalt-precorr 99.3 1.3E-10 4.6E-15 100.5 16.4 114 141-277 34-147 (183)
102 2gb4_A Thiopurine S-methyltran 99.3 1.4E-11 4.9E-16 114.7 10.7 108 142-254 68-188 (252)
103 3k6r_A Putative transferase PH 99.3 5.5E-11 1.9E-15 112.5 14.4 173 108-301 95-271 (278)
104 3ujc_A Phosphoethanolamine N-m 99.3 1.2E-11 4.2E-16 113.8 9.7 106 141-257 54-159 (266)
105 1fbn_A MJ fibrillarin homologu 99.3 3E-11 1E-15 110.2 12.2 102 141-255 73-176 (230)
106 2p7i_A Hypothetical protein; p 99.3 1.2E-11 4E-16 112.4 9.4 101 142-259 42-143 (250)
107 3gu3_A Methyltransferase; alph 99.3 1.5E-11 5.2E-16 115.7 10.4 107 141-259 21-128 (284)
108 3hnr_A Probable methyltransfer 99.3 2.4E-11 8.3E-16 109.1 11.1 113 127-257 33-145 (220)
109 3dmg_A Probable ribosomal RNA 99.3 1.8E-11 6.1E-16 120.8 11.1 122 142-279 233-355 (381)
110 3ocj_A Putative exported prote 99.3 5.4E-12 1.9E-16 120.0 7.0 110 141-257 117-227 (305)
111 1kpg_A CFA synthase;, cyclopro 99.3 3.1E-11 1E-15 113.2 12.0 105 141-257 63-168 (287)
112 3h2b_A SAM-dependent methyltra 99.2 2E-11 6.9E-16 108.4 10.0 100 143-257 42-141 (203)
113 3i9f_A Putative type 11 methyl 99.2 5.3E-11 1.8E-15 102.7 12.4 96 141-256 16-111 (170)
114 1o54_A SAM-dependent O-methylt 99.2 2.3E-11 7.8E-16 114.1 10.8 117 141-276 111-228 (277)
115 2xvm_A Tellurite resistance pr 99.2 2.7E-11 9.1E-16 106.7 10.6 103 142-255 32-134 (199)
116 2as0_A Hypothetical protein PH 99.2 3.1E-11 1.1E-15 119.4 12.1 124 142-269 217-347 (396)
117 2yqz_A Hypothetical protein TT 99.2 3E-11 1E-15 111.2 11.2 103 141-256 38-140 (263)
118 1xxl_A YCGJ protein; structura 99.2 2.9E-11 9.8E-16 110.8 10.9 104 141-256 20-123 (239)
119 2vdw_A Vaccinia virus capping 99.2 1.8E-11 6.1E-16 117.1 9.9 116 141-259 47-171 (302)
120 3lcc_A Putative methyl chlorid 99.2 1.4E-11 4.7E-16 112.2 8.6 104 143-256 67-170 (235)
121 3vc1_A Geranyl diphosphate 2-C 99.2 1.9E-11 6.5E-16 116.6 9.8 106 141-257 116-221 (312)
122 3e8s_A Putative SAM dependent 99.2 7.9E-11 2.7E-15 105.5 13.3 100 142-258 52-153 (227)
123 1wxx_A TT1595, hypothetical pr 99.2 3.3E-11 1.1E-15 118.7 11.7 122 142-269 209-337 (382)
124 2yvl_A TRMI protein, hypotheti 99.2 4.6E-11 1.6E-15 109.2 11.9 102 141-258 90-191 (248)
125 3l8d_A Methyltransferase; stru 99.2 3.7E-11 1.3E-15 109.3 11.2 102 141-257 52-153 (242)
126 3d2l_A SAM-dependent methyltra 99.2 2.2E-11 7.4E-16 110.8 9.6 105 142-259 33-139 (243)
127 2pwy_A TRNA (adenine-N(1)-)-me 99.2 4.2E-11 1.4E-15 110.1 11.6 117 141-276 95-213 (258)
128 2pxx_A Uncharacterized protein 99.2 9.8E-12 3.4E-16 110.7 7.1 109 141-258 41-160 (215)
129 2p35_A Trans-aconitate 2-methy 99.2 1.9E-11 6.4E-16 112.5 8.9 111 129-258 23-133 (259)
130 4fsd_A Arsenic methyltransfera 99.2 2.6E-11 9E-16 119.3 10.5 111 142-256 83-202 (383)
131 3bkw_A MLL3908 protein, S-aden 99.2 4E-11 1.4E-15 109.1 10.9 104 142-259 43-146 (243)
132 2p8j_A S-adenosylmethionine-de 99.2 1.8E-11 6.1E-16 108.9 8.4 119 127-257 10-128 (209)
133 3q7e_A Protein arginine N-meth 99.2 2.2E-11 7.6E-16 118.5 9.7 109 142-258 66-174 (349)
134 3c0k_A UPF0064 protein YCCW; P 99.2 7.6E-11 2.6E-15 116.6 13.5 121 142-265 220-347 (396)
135 3m70_A Tellurite resistance pr 99.2 3.5E-11 1.2E-15 112.9 10.5 103 142-256 120-222 (286)
136 2o57_A Putative sarcosine dime 99.2 2.9E-11 9.9E-16 114.0 10.0 107 141-257 81-187 (297)
137 4df3_A Fibrillarin-like rRNA/T 99.2 6.4E-11 2.2E-15 109.2 12.0 128 140-279 75-210 (233)
138 1xtp_A LMAJ004091AAA; SGPP, st 99.2 3.6E-11 1.2E-15 110.2 10.4 106 141-257 92-197 (254)
139 3ajd_A Putative methyltransfer 99.2 8.5E-11 2.9E-15 110.5 13.0 117 141-261 82-215 (274)
140 2qm3_A Predicted methyltransfe 99.2 4.7E-11 1.6E-15 117.2 11.7 101 142-252 172-272 (373)
141 2yx1_A Hypothetical protein MJ 99.2 6.1E-11 2.1E-15 114.9 12.2 114 141-278 194-307 (336)
142 3cgg_A SAM-dependent methyltra 99.2 7.6E-11 2.6E-15 102.9 11.7 102 141-257 45-147 (195)
143 3ggd_A SAM-dependent methyltra 99.2 3.6E-11 1.2E-15 110.1 10.0 105 141-256 55-162 (245)
144 2fk8_A Methoxy mycolic acid sy 99.2 8.6E-11 2.9E-15 112.0 13.0 106 141-257 89-194 (318)
145 3ou2_A SAM-dependent methyltra 99.2 3.1E-11 1E-15 107.8 9.3 103 141-258 45-147 (218)
146 2ipx_A RRNA 2'-O-methyltransfe 99.2 4E-11 1.4E-15 109.4 10.1 104 141-256 76-181 (233)
147 3pfg_A N-methyltransferase; N, 99.2 2E-11 6.9E-16 113.0 8.2 101 141-256 49-150 (263)
148 3tma_A Methyltransferase; thum 99.2 4.9E-11 1.7E-15 116.0 11.1 113 141-259 202-319 (354)
149 1i9g_A Hypothetical protein RV 99.2 6.9E-11 2.3E-15 110.4 11.5 119 141-276 98-218 (280)
150 2fyt_A Protein arginine N-meth 99.2 7.8E-11 2.7E-15 114.3 12.2 107 141-255 63-169 (340)
151 1ri5_A MRNA capping enzyme; me 99.2 2.4E-11 8.3E-16 113.9 8.3 114 141-259 63-176 (298)
152 1wzn_A SAM-dependent methyltra 99.2 4E-11 1.4E-15 110.1 9.5 107 141-258 40-146 (252)
153 3r0q_C Probable protein argini 99.2 5.4E-11 1.9E-15 117.0 11.0 109 141-258 62-170 (376)
154 3kr9_A SAM-dependent methyltra 99.2 3.4E-11 1.2E-15 110.5 8.9 107 141-258 14-120 (225)
155 3thr_A Glycine N-methyltransfe 99.2 2.4E-11 8.2E-16 114.2 7.9 116 142-259 57-177 (293)
156 2pjd_A Ribosomal RNA small sub 99.2 1.7E-11 5.7E-16 119.0 6.9 108 142-258 196-304 (343)
157 3gdh_A Trimethylguanosine synt 99.2 6.4E-12 2.2E-16 114.9 3.6 103 142-256 78-180 (241)
158 2kw5_A SLR1183 protein; struct 99.2 6.4E-11 2.2E-15 105.0 9.8 100 145-257 32-131 (202)
159 3ccf_A Cyclopropane-fatty-acyl 99.2 1.1E-10 3.8E-15 109.2 11.6 99 141-257 56-154 (279)
160 1dl5_A Protein-L-isoaspartate 99.2 1.2E-10 4E-15 111.7 12.0 102 141-258 74-176 (317)
161 3v97_A Ribosomal RNA large sub 99.2 1.2E-10 4E-15 123.5 12.9 114 142-259 539-659 (703)
162 2yxe_A Protein-L-isoaspartate 99.2 8.1E-11 2.8E-15 105.5 10.0 102 141-258 76-178 (215)
163 3gnl_A Uncharacterized protein 99.2 4.8E-11 1.6E-15 110.7 8.7 122 141-279 20-142 (244)
164 3g2m_A PCZA361.24; SAM-depende 99.2 1.7E-11 5.9E-16 116.0 5.8 110 142-259 82-192 (299)
165 1y8c_A S-adenosylmethionine-de 99.2 5.2E-11 1.8E-15 108.2 8.7 108 141-259 36-144 (246)
166 3dou_A Ribosomal RNA large sub 99.2 1.6E-10 5.5E-15 103.0 11.7 151 129-304 14-180 (191)
167 2qy6_A UPF0209 protein YFCK; s 99.2 9.9E-11 3.4E-15 109.5 10.4 148 142-305 60-247 (257)
168 3lec_A NADB-rossmann superfami 99.2 6.9E-11 2.4E-15 108.7 9.0 106 141-257 20-125 (230)
169 2qe6_A Uncharacterized protein 99.2 3.8E-10 1.3E-14 106.2 14.2 108 142-257 77-196 (274)
170 1o9g_A RRNA methyltransferase; 99.2 1.7E-11 5.8E-16 113.2 4.8 111 142-255 51-212 (250)
171 2h00_A Methyltransferase 10 do 99.2 1.6E-11 5.4E-16 113.4 4.6 81 142-225 65-149 (254)
172 2pbf_A Protein-L-isoaspartate 99.2 1.6E-10 5.5E-15 104.6 11.1 105 141-257 79-193 (227)
173 1r18_A Protein-L-isoaspartate( 99.1 1.1E-10 3.6E-15 106.1 9.8 106 141-258 83-195 (227)
174 3m33_A Uncharacterized protein 99.1 3.6E-11 1.2E-15 109.3 6.7 92 141-254 47-139 (226)
175 3fzg_A 16S rRNA methylase; met 99.1 4.7E-11 1.6E-15 106.6 7.2 114 126-256 38-151 (200)
176 1ixk_A Methyltransferase; open 99.1 3E-10 1E-14 109.0 13.4 114 141-260 117-249 (315)
177 3bxo_A N,N-dimethyltransferase 99.1 6.5E-11 2.2E-15 107.3 8.2 103 141-257 39-141 (239)
178 1vbf_A 231AA long hypothetical 99.1 1.5E-10 5.2E-15 104.9 10.3 97 141-257 69-165 (231)
179 3id6_C Fibrillarin-like rRNA/T 99.1 2.6E-10 9E-15 105.1 11.9 105 140-256 74-180 (232)
180 1wy7_A Hypothetical protein PH 99.1 1.4E-09 4.6E-14 96.9 16.2 100 142-256 49-148 (207)
181 1i1n_A Protein-L-isoaspartate 99.1 3.3E-10 1.1E-14 102.4 12.3 117 128-257 64-182 (226)
182 3bgv_A MRNA CAP guanine-N7 met 99.1 5.8E-11 2E-15 113.2 7.5 117 141-258 33-156 (313)
183 3uwp_A Histone-lysine N-methyl 99.1 1.4E-10 4.6E-15 115.0 10.3 121 128-256 162-287 (438)
184 2avn_A Ubiquinone/menaquinone 99.1 7.5E-11 2.6E-15 109.3 8.0 103 141-261 53-156 (260)
185 3p2e_A 16S rRNA methylase; met 99.1 2.9E-11 1E-15 110.6 5.0 109 142-255 24-137 (225)
186 1ej0_A FTSJ; methyltransferase 99.1 1.3E-10 4.3E-15 99.5 8.7 120 141-279 21-154 (180)
187 3dp7_A SAM-dependent methyltra 99.1 1.7E-10 5.7E-15 112.7 10.6 109 141-256 178-286 (363)
188 2gs9_A Hypothetical protein TT 99.1 2E-10 6.8E-15 102.5 9.9 98 142-258 36-133 (211)
189 1jg1_A PIMT;, protein-L-isoasp 99.1 1.3E-10 4.6E-15 106.1 9.0 102 141-259 90-191 (235)
190 1g6q_1 HnRNP arginine N-methyl 99.1 1.5E-10 5E-15 111.8 9.6 107 142-256 38-144 (328)
191 1ne2_A Hypothetical protein TA 99.1 4.3E-10 1.5E-14 99.8 11.6 96 141-255 50-145 (200)
192 2plw_A Ribosomal RNA methyltra 99.1 2.3E-10 8E-15 101.3 9.7 120 141-279 21-172 (201)
193 2y1w_A Histone-arginine methyl 99.1 2.8E-10 9.4E-15 110.7 11.0 108 142-259 50-157 (348)
194 3q87_B N6 adenine specific DNA 99.1 3.4E-10 1.2E-14 98.6 10.2 114 142-279 23-142 (170)
195 4hc4_A Protein arginine N-meth 99.1 1.6E-10 5.4E-15 113.8 8.8 107 142-257 83-189 (376)
196 3m6w_A RRNA methylase; rRNA me 99.1 5.7E-10 1.9E-14 112.6 13.0 114 141-260 100-232 (464)
197 3cc8_A Putative methyltransfer 99.1 2.5E-10 8.7E-15 102.4 8.7 102 141-259 31-132 (230)
198 3ege_A Putative methyltransfer 99.1 1.8E-10 6.1E-15 106.9 7.9 98 141-257 33-130 (261)
199 3iv6_A Putative Zn-dependent a 99.1 4.4E-10 1.5E-14 105.3 10.4 106 141-259 44-150 (261)
200 3bkx_A SAM-dependent methyltra 99.1 3.7E-10 1.3E-14 104.9 9.9 110 141-257 42-159 (275)
201 3i53_A O-methyltransferase; CO 99.1 4.5E-10 1.5E-14 107.9 10.7 105 142-256 169-273 (332)
202 1p91_A Ribosomal RNA large sub 99.1 1.7E-10 6E-15 107.0 7.5 96 141-258 84-179 (269)
203 2dul_A N(2),N(2)-dimethylguano 99.1 6.2E-10 2.1E-14 109.7 11.6 104 142-256 47-163 (378)
204 2aot_A HMT, histamine N-methyl 99.1 4.4E-10 1.5E-14 106.1 9.8 111 142-257 52-172 (292)
205 3mq2_A 16S rRNA methyltransfer 99.1 2.2E-10 7.6E-15 103.0 7.4 107 141-256 26-139 (218)
206 1u2z_A Histone-lysine N-methyl 99.1 5.6E-10 1.9E-14 111.7 10.9 108 141-256 241-358 (433)
207 3m4x_A NOL1/NOP2/SUN family pr 99.0 8.4E-10 2.9E-14 111.2 12.2 115 141-260 104-237 (456)
208 3gwz_A MMCR; methyltransferase 99.0 7.4E-10 2.5E-14 108.3 11.5 106 141-256 201-306 (369)
209 2a14_A Indolethylamine N-methy 99.0 3.6E-11 1.2E-15 112.1 1.6 113 142-256 55-196 (263)
210 1qzz_A RDMB, aclacinomycin-10- 99.0 5.1E-10 1.7E-14 109.0 9.5 106 141-256 181-286 (374)
211 3bzb_A Uncharacterized protein 99.0 7.7E-10 2.6E-14 104.3 10.2 108 142-255 79-203 (281)
212 2nyu_A Putative ribosomal RNA 99.0 8.5E-10 2.9E-14 97.1 9.8 120 141-279 21-163 (196)
213 2yxl_A PH0851 protein, 450AA l 99.0 9.4E-10 3.2E-14 110.7 11.3 116 141-260 258-392 (450)
214 2ip2_A Probable phenazine-spec 99.0 8.9E-10 3E-14 105.7 10.7 103 144-256 169-271 (334)
215 2i62_A Nicotinamide N-methyltr 99.0 8.4E-11 2.9E-15 108.3 3.3 114 142-256 56-197 (265)
216 3mcz_A O-methyltransferase; ad 99.0 5.1E-10 1.7E-14 108.2 8.8 107 143-256 180-286 (352)
217 3axs_A Probable N(2),N(2)-dime 99.0 7.5E-10 2.6E-14 109.5 10.0 103 142-256 52-157 (392)
218 3hp7_A Hemolysin, putative; st 99.0 8.5E-10 2.9E-14 104.9 9.9 128 110-256 54-184 (291)
219 1sqg_A SUN protein, FMU protei 99.0 1E-09 3.6E-14 109.6 11.0 115 141-260 245-377 (429)
220 2frx_A Hypothetical protein YE 99.0 1.7E-09 5.8E-14 109.7 12.7 114 142-260 117-249 (479)
221 3bt7_A TRNA (uracil-5-)-methyl 99.0 2.1E-09 7E-14 105.4 12.3 103 143-261 214-330 (369)
222 2r3s_A Uncharacterized protein 99.0 6.7E-10 2.3E-14 106.3 8.5 107 141-256 164-270 (335)
223 1tw3_A COMT, carminomycin 4-O- 99.0 7.1E-10 2.4E-14 107.6 8.6 106 141-256 182-287 (360)
224 2f8l_A Hypothetical protein LM 99.0 1E-09 3.5E-14 106.3 9.5 128 142-277 130-276 (344)
225 1x19_A CRTF-related protein; m 99.0 2.1E-09 7.2E-14 104.4 11.4 106 141-256 189-294 (359)
226 2g72_A Phenylethanolamine N-me 99.0 1.6E-10 5.5E-15 108.7 3.3 114 142-256 71-214 (289)
227 3tm4_A TRNA (guanine N2-)-meth 99.0 1.7E-09 5.8E-14 106.2 10.0 145 141-304 216-365 (373)
228 3b3j_A Histone-arginine methyl 98.9 1.1E-09 3.7E-14 111.2 8.4 107 142-258 158-264 (480)
229 2ih2_A Modification methylase 98.9 1E-09 3.6E-14 108.4 7.8 121 141-277 38-184 (421)
230 3htx_A HEN1; HEN1, small RNA m 98.9 2.7E-09 9.1E-14 113.2 11.2 111 142-257 721-834 (950)
231 3opn_A Putative hemolysin; str 98.9 5.6E-09 1.9E-13 96.0 12.1 112 126-256 23-136 (232)
232 3sso_A Methyltransferase; macr 98.9 5.8E-10 2E-14 110.1 5.7 108 127-256 205-323 (419)
233 2wa2_A Non-structural protein 98.9 5.7E-10 2E-14 105.4 5.3 126 141-279 81-213 (276)
234 2oxt_A Nucleoside-2'-O-methylt 98.9 5.3E-10 1.8E-14 104.9 4.7 126 141-279 73-205 (265)
235 1vlm_A SAM-dependent methyltra 98.9 1.9E-09 6.4E-14 97.1 8.0 92 143-257 48-139 (219)
236 3lcv_B Sisomicin-gentamicin re 98.9 9.7E-10 3.3E-14 102.5 5.6 112 128-255 123-234 (281)
237 4e2x_A TCAB9; kijanose, tetron 98.9 1.2E-09 4E-14 108.3 5.7 103 141-257 106-208 (416)
238 2p41_A Type II methyltransfera 98.9 1.8E-09 6E-14 103.4 6.6 125 141-280 81-212 (305)
239 3cvo_A Methyltransferase-like 98.9 1.3E-08 4.3E-13 91.8 11.7 100 142-255 30-152 (202)
240 1uwv_A 23S rRNA (uracil-5-)-me 98.9 9.2E-09 3.2E-13 102.9 12.0 102 141-256 285-388 (433)
241 2jjq_A Uncharacterized RNA met 98.9 8.4E-09 2.9E-13 103.1 11.7 99 141-257 289-387 (425)
242 3lst_A CALO1 methyltransferase 98.9 4.5E-09 1.5E-13 101.8 9.2 103 141-256 183-285 (348)
243 4a6d_A Hydroxyindole O-methylt 98.8 1E-08 3.6E-13 99.7 10.9 105 141-256 178-282 (353)
244 1af7_A Chemotaxis receptor met 98.8 3.9E-09 1.3E-13 99.6 7.1 111 142-256 105-251 (274)
245 1zq9_A Probable dimethyladenos 98.8 1.8E-08 6.2E-13 95.2 11.7 86 128-225 17-102 (285)
246 3giw_A Protein of unknown func 98.8 2.6E-08 8.9E-13 93.8 12.3 122 129-257 67-200 (277)
247 3reo_A (ISO)eugenol O-methyltr 98.8 7.4E-09 2.5E-13 101.3 8.3 98 141-256 202-299 (368)
248 3ldu_A Putative methylase; str 98.8 1.2E-08 4.1E-13 100.7 8.8 113 141-259 194-346 (385)
249 3p9c_A Caffeic acid O-methyltr 98.8 1.1E-08 3.8E-13 99.9 8.5 98 141-256 200-297 (364)
250 1fp1_D Isoliquiritigenin 2'-O- 98.8 7.7E-09 2.6E-13 101.1 7.0 98 141-256 208-305 (372)
251 3vyw_A MNMC2; tRNA wobble urid 98.8 6.8E-08 2.3E-12 92.1 13.3 148 143-306 97-261 (308)
252 1fp2_A Isoflavone O-methyltran 98.8 1.1E-08 3.9E-13 99.0 8.0 98 141-256 187-287 (352)
253 3k0b_A Predicted N6-adenine-sp 98.8 1.6E-08 5.6E-13 100.0 9.2 112 141-258 200-351 (393)
254 3ldg_A Putative uncharacterize 98.8 3E-08 1E-12 97.9 11.0 112 141-258 193-344 (384)
255 3frh_A 16S rRNA methylase; met 98.8 1.4E-08 4.9E-13 93.6 8.0 101 141-255 104-204 (253)
256 2zfu_A Nucleomethylin, cerebra 98.8 1.3E-08 4.3E-13 91.1 7.4 126 141-306 66-192 (215)
257 4azs_A Methyltransferase WBDD; 98.7 2.4E-08 8.1E-13 103.3 10.3 76 141-222 65-140 (569)
258 2xyq_A Putative 2'-O-methyl tr 98.7 3.4E-08 1.2E-12 93.8 10.4 109 126-256 45-170 (290)
259 1m6y_A S-adenosyl-methyltransf 98.7 5.6E-08 1.9E-12 92.8 11.4 90 128-225 15-107 (301)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.7 4.5E-08 1.5E-12 93.8 10.7 115 141-260 101-237 (309)
261 3gru_A Dimethyladenosine trans 98.7 3.2E-08 1.1E-12 94.2 9.3 74 142-225 50-123 (295)
262 3ll7_A Putative methyltransfer 98.7 1.8E-08 6.1E-13 100.0 7.2 80 143-226 94-173 (410)
263 2r6z_A UPF0341 protein in RSP 98.7 1.3E-08 4.5E-13 95.1 5.8 80 142-226 83-171 (258)
264 2okc_A Type I restriction enzy 98.7 3.4E-08 1.2E-12 99.0 9.1 113 142-259 171-309 (445)
265 2h1r_A Dimethyladenosine trans 98.7 3.7E-08 1.3E-12 93.7 8.3 75 141-225 41-115 (299)
266 3tqs_A Ribosomal RNA small sub 98.6 9.8E-08 3.4E-12 89.0 10.0 74 142-224 29-104 (255)
267 1zg3_A Isoflavanone 4'-O-methy 98.6 6E-08 2E-12 94.1 7.3 96 142-255 193-291 (358)
268 3fut_A Dimethyladenosine trans 98.6 2.2E-07 7.6E-12 87.3 10.9 72 145-226 49-120 (271)
269 2wk1_A NOVP; transferase, O-me 98.5 1.4E-07 4.9E-12 89.1 8.5 109 141-257 105-244 (282)
270 1yub_A Ermam, rRNA methyltrans 98.5 4.1E-09 1.4E-13 97.2 -2.2 117 127-257 17-145 (245)
271 2ld4_A Anamorsin; methyltransf 98.5 8.9E-08 3.1E-12 82.9 6.4 89 141-256 11-100 (176)
272 4fzv_A Putative methyltransfer 98.5 1.1E-06 3.7E-11 85.9 14.6 135 141-276 147-305 (359)
273 1qam_A ERMC' methyltransferase 98.5 6.2E-07 2.1E-11 82.7 11.9 73 141-224 29-102 (244)
274 2oyr_A UPF0341 protein YHIQ; a 98.5 9.9E-08 3.4E-12 89.1 6.2 100 144-251 90-194 (258)
275 3khk_A Type I restriction-modi 98.5 1.2E-07 4E-12 97.6 6.7 135 141-279 243-419 (544)
276 3v97_A Ribosomal RNA large sub 98.5 2E-07 6.8E-12 98.8 8.5 116 141-259 189-349 (703)
277 3ftd_A Dimethyladenosine trans 98.5 6.9E-07 2.4E-11 82.8 10.5 73 142-225 31-104 (249)
278 3lkd_A Type I restriction-modi 98.4 1.5E-06 5E-11 89.4 13.3 136 142-279 221-381 (542)
279 2ar0_A M.ecoki, type I restric 98.4 4.5E-07 1.5E-11 93.3 8.6 134 142-278 169-334 (541)
280 3s1s_A Restriction endonucleas 98.4 9.4E-07 3.2E-11 93.7 9.5 137 142-279 321-489 (878)
281 3evf_A RNA-directed RNA polyme 98.3 7.6E-07 2.6E-11 83.3 7.5 161 129-306 64-228 (277)
282 2oo3_A Protein involved in cat 98.3 4.9E-06 1.7E-10 78.3 11.9 132 127-278 82-217 (283)
283 3uzu_A Ribosomal RNA small sub 98.3 2E-06 6.8E-11 81.1 8.8 60 141-208 41-102 (279)
284 1qyr_A KSGA, high level kasuga 98.3 1.2E-06 4E-11 81.5 7.1 86 129-225 11-99 (252)
285 3gcz_A Polyprotein; flavivirus 98.2 1E-06 3.4E-11 82.6 5.9 161 129-306 80-245 (282)
286 4gqb_A Protein arginine N-meth 98.2 8.1E-07 2.8E-11 92.6 5.6 106 143-257 358-467 (637)
287 3ua3_A Protein arginine N-meth 98.2 1.6E-06 5.6E-11 90.6 7.1 111 143-259 410-536 (745)
288 1wg8_A Predicted S-adenosylmet 98.1 1.5E-05 5.1E-10 75.0 10.6 83 129-224 12-97 (285)
289 3eld_A Methyltransferase; flav 98.1 1.5E-05 5.3E-10 75.1 10.1 160 129-306 71-235 (300)
290 3ps9_A TRNA 5-methylaminomethy 97.9 5.7E-05 2E-09 79.2 12.2 114 144-258 68-220 (676)
291 3pvc_A TRNA 5-methylaminomethy 97.8 6E-05 2.1E-09 79.3 10.4 115 143-258 59-212 (689)
292 2px2_A Genome polyprotein [con 97.8 0.00011 3.7E-09 68.0 10.4 137 129-283 63-206 (269)
293 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00017 5.7E-09 68.0 8.8 150 126-304 91-256 (344)
294 3p8z_A Mtase, non-structural p 97.6 0.00035 1.2E-08 63.9 10.0 140 126-280 65-207 (267)
295 4auk_A Ribosomal RNA large sub 97.5 0.00042 1.4E-08 67.6 10.5 71 141-226 210-280 (375)
296 3ufb_A Type I restriction-modi 97.4 0.00038 1.3E-08 71.2 9.7 133 143-279 218-385 (530)
297 1i4w_A Mitochondrial replicati 97.4 0.00018 6.1E-09 69.9 6.4 59 143-208 59-117 (353)
298 3lkz_A Non-structural protein 97.4 0.00041 1.4E-08 65.3 8.2 141 126-280 81-225 (321)
299 3tka_A Ribosomal RNA small sub 97.3 0.0008 2.7E-08 64.7 9.2 85 129-224 47-136 (347)
300 3tos_A CALS11; methyltransfera 97.2 0.0027 9.3E-08 58.9 11.3 142 141-295 68-250 (257)
301 2efj_A 3,7-dimethylxanthine me 97.1 0.0014 4.6E-08 64.4 9.4 109 143-257 53-225 (384)
302 3b5i_A S-adenosyl-L-methionine 97.1 0.0011 3.6E-08 65.0 8.4 129 129-257 37-225 (374)
303 2zig_A TTHA0409, putative modi 97.0 0.00083 2.8E-08 63.3 5.8 47 141-189 234-280 (297)
304 1g55_A DNA cytosine methyltran 96.9 0.0051 1.7E-07 59.3 11.0 151 143-306 2-170 (343)
305 2k4m_A TR8_protein, UPF0146 pr 96.9 0.00026 8.9E-09 60.1 1.6 60 141-221 34-94 (153)
306 1m6e_X S-adenosyl-L-methionnin 96.8 0.0014 4.7E-08 63.8 5.8 115 140-257 49-209 (359)
307 1f8f_A Benzyl alcohol dehydrog 96.7 0.0028 9.6E-08 61.3 7.5 100 141-257 189-289 (371)
308 1pl8_A Human sorbitol dehydrog 96.5 0.0074 2.5E-07 58.0 8.9 97 141-257 170-273 (356)
309 4ej6_A Putative zinc-binding d 96.4 0.0061 2.1E-07 59.0 7.9 100 141-257 181-284 (370)
310 3m6i_A L-arabinitol 4-dehydrog 96.4 0.017 5.9E-07 55.4 11.1 99 141-257 178-283 (363)
311 3g7u_A Cytosine-specific methy 96.3 0.02 6.7E-07 55.9 10.9 148 144-305 3-172 (376)
312 3s2e_A Zinc-containing alcohol 96.3 0.0069 2.4E-07 57.7 7.3 98 141-257 165-263 (340)
313 3fpc_A NADP-dependent alcohol 96.3 0.0063 2.1E-07 58.3 6.9 100 141-257 165-266 (352)
314 2c7p_A Modification methylase 96.1 0.052 1.8E-06 51.9 12.1 147 143-305 11-173 (327)
315 1boo_A Protein (N-4 cytosine-s 96.0 0.0074 2.5E-07 57.6 5.9 67 194-260 11-87 (323)
316 3uko_A Alcohol dehydrogenase c 96.0 0.01 3.4E-07 57.5 6.9 100 141-257 192-295 (378)
317 2dph_A Formaldehyde dismutase; 96.0 0.0094 3.2E-07 58.2 6.5 109 141-257 184-299 (398)
318 1eg2_A Modification methylase 95.9 0.015 5E-07 55.5 7.5 65 195-259 36-108 (319)
319 4h0n_A DNMT2; SAH binding, tra 95.9 0.08 2.7E-06 50.7 12.6 152 144-308 4-172 (333)
320 1cdo_A Alcohol dehydrogenase; 95.8 0.038 1.3E-06 53.3 10.1 100 141-257 191-294 (374)
321 2jhf_A Alcohol dehydrogenase E 95.8 0.048 1.6E-06 52.5 10.8 100 141-257 190-293 (374)
322 1g60_A Adenine-specific methyl 95.8 0.01 3.5E-07 54.7 5.6 46 141-188 211-256 (260)
323 4eez_A Alcohol dehydrogenase 1 95.8 0.038 1.3E-06 52.4 9.8 100 141-257 162-263 (348)
324 1p0f_A NADP-dependent alcohol 95.7 0.018 6.2E-07 55.5 7.4 100 141-257 190-293 (373)
325 2fzw_A Alcohol dehydrogenase c 95.7 0.048 1.6E-06 52.4 10.1 100 141-257 189-292 (373)
326 3jv7_A ADH-A; dehydrogenase, n 95.7 0.026 8.9E-07 53.7 8.2 99 141-257 170-270 (345)
327 1e3i_A Alcohol dehydrogenase, 95.6 0.021 7.1E-07 55.1 7.4 100 141-257 194-297 (376)
328 2zig_A TTHA0409, putative modi 95.6 0.013 4.5E-07 55.0 5.7 64 195-258 19-98 (297)
329 1e3j_A NADP(H)-dependent ketos 95.6 0.03 1E-06 53.5 8.3 99 141-257 167-271 (352)
330 3qv2_A 5-cytosine DNA methyltr 95.6 0.13 4.3E-06 49.2 12.4 153 142-306 9-181 (327)
331 1g60_A Adenine-specific methyl 95.5 0.014 4.9E-07 53.6 5.5 61 197-257 4-74 (260)
332 1pqw_A Polyketide synthase; ro 95.5 0.021 7.1E-07 49.7 6.2 98 141-257 37-137 (198)
333 3ip1_A Alcohol dehydrogenase, 95.5 0.036 1.2E-06 54.2 8.4 101 141-257 212-318 (404)
334 2b5w_A Glucose dehydrogenase; 95.5 0.042 1.4E-06 52.6 8.8 94 144-257 174-273 (357)
335 4a2c_A Galactitol-1-phosphate 95.4 0.044 1.5E-06 51.9 8.7 100 141-257 159-260 (346)
336 4dvj_A Putative zinc-dependent 95.3 0.04 1.4E-06 53.0 8.1 97 142-256 171-269 (363)
337 1kol_A Formaldehyde dehydrogen 95.3 0.039 1.3E-06 53.6 8.0 109 141-257 184-300 (398)
338 1vj0_A Alcohol dehydrogenase, 95.2 0.034 1.2E-06 53.9 7.4 97 141-257 194-298 (380)
339 2d8a_A PH0655, probable L-thre 95.2 0.027 9.4E-07 53.7 6.4 99 142-257 167-267 (348)
340 4b7c_A Probable oxidoreductase 95.1 0.029 9.9E-07 53.1 6.5 99 141-257 148-248 (336)
341 3uog_A Alcohol dehydrogenase; 95.1 0.1 3.6E-06 50.0 10.3 95 141-257 188-287 (363)
342 2dq4_A L-threonine 3-dehydroge 94.9 0.014 4.9E-07 55.6 3.6 98 142-257 164-262 (343)
343 1v3u_A Leukotriene B4 12- hydr 94.9 0.05 1.7E-06 51.4 7.4 98 141-257 144-244 (333)
344 1pjc_A Protein (L-alanine dehy 94.9 0.18 6.3E-06 48.5 11.5 101 142-257 166-267 (361)
345 2h6e_A ADH-4, D-arabinose 1-de 94.9 0.071 2.4E-06 50.7 8.3 95 142-257 170-269 (344)
346 2c0c_A Zinc binding alcohol de 94.8 0.05 1.7E-06 52.3 7.0 98 141-257 162-261 (362)
347 1uuf_A YAHK, zinc-type alcohol 94.8 0.094 3.2E-06 50.6 9.0 95 141-257 193-288 (369)
348 1rjw_A ADH-HT, alcohol dehydro 94.8 0.045 1.5E-06 52.0 6.6 98 141-257 163-261 (339)
349 3ubt_Y Modification methylase 94.5 0.57 1.9E-05 44.0 13.6 147 145-306 2-164 (331)
350 3fbg_A Putative arginate lyase 94.5 0.088 3E-06 50.1 7.9 97 142-257 150-248 (346)
351 4eye_A Probable oxidoreductase 94.4 0.052 1.8E-06 51.7 6.0 97 141-257 158-257 (342)
352 3fwz_A Inner membrane protein 94.3 0.19 6.5E-06 41.2 8.7 97 143-258 7-106 (140)
353 2hcy_A Alcohol dehydrogenase 1 94.3 0.051 1.7E-06 51.8 5.7 99 141-257 168-269 (347)
354 3gms_A Putative NADPH:quinone 94.2 0.041 1.4E-06 52.3 5.0 98 141-257 143-243 (340)
355 2j3h_A NADP-dependent oxidored 94.1 0.055 1.9E-06 51.3 5.7 97 141-257 154-255 (345)
356 3two_A Mannitol dehydrogenase; 94.1 0.089 3E-06 50.1 7.1 90 141-257 175-265 (348)
357 3qwb_A Probable quinone oxidor 94.1 0.051 1.7E-06 51.4 5.4 98 141-257 147-247 (334)
358 2zb4_A Prostaglandin reductase 94.1 0.081 2.8E-06 50.5 6.7 97 144-257 162-260 (357)
359 3jyn_A Quinone oxidoreductase; 94.0 0.045 1.5E-06 51.6 4.7 98 141-257 139-239 (325)
360 3me5_A Cytosine-specific methy 94.0 0.42 1.4E-05 48.1 11.9 124 143-276 88-249 (482)
361 4dup_A Quinone oxidoreductase; 93.9 0.052 1.8E-06 51.9 5.0 98 141-257 166-265 (353)
362 2vhw_A Alanine dehydrogenase; 93.9 0.4 1.4E-05 46.4 11.4 98 142-257 167-268 (377)
363 1jvb_A NAD(H)-dependent alcoho 93.8 0.062 2.1E-06 51.1 5.4 100 141-257 169-271 (347)
364 2eih_A Alcohol dehydrogenase; 93.5 0.16 5.5E-06 48.2 7.6 98 141-257 165-265 (343)
365 1id1_A Putative potassium chan 93.2 0.4 1.4E-05 39.7 8.8 101 143-260 3-108 (153)
366 3gaz_A Alcohol dehydrogenase s 93.1 0.15 5.1E-06 48.5 6.8 95 141-257 149-246 (343)
367 1yb5_A Quinone oxidoreductase; 93.0 0.16 5.5E-06 48.5 6.8 98 141-257 169-269 (351)
368 3gqv_A Enoyl reductase; medium 92.8 0.26 9E-06 47.3 8.1 98 141-257 163-263 (371)
369 2eez_A Alanine dehydrogenase; 92.7 0.74 2.5E-05 44.3 11.1 99 142-257 165-266 (369)
370 3goh_A Alcohol dehydrogenase, 92.6 0.1 3.4E-06 48.9 4.7 88 141-257 141-229 (315)
371 1wly_A CAAR, 2-haloacrylate re 92.5 0.13 4.5E-06 48.5 5.4 98 141-257 144-244 (333)
372 1boo_A Protein (N-4 cytosine-s 92.5 0.056 1.9E-06 51.4 2.7 62 141-209 251-312 (323)
373 1piw_A Hypothetical zinc-type 92.4 0.25 8.6E-06 47.2 7.3 97 141-257 178-276 (360)
374 2j8z_A Quinone oxidoreductase; 92.4 0.15 5.3E-06 48.6 5.8 98 141-257 161-261 (354)
375 2qrv_A DNA (cytosine-5)-methyl 92.4 0.2 6.7E-06 47.2 6.3 74 142-225 15-92 (295)
376 2cdc_A Glucose dehydrogenase g 92.4 0.24 8.3E-06 47.4 7.2 93 143-257 181-278 (366)
377 3swr_A DNA (cytosine-5)-methyl 92.3 5.9 0.0002 43.2 18.6 152 143-306 540-723 (1002)
378 1qor_A Quinone oxidoreductase; 92.3 0.13 4.3E-06 48.4 5.0 98 141-257 139-239 (327)
379 1iz0_A Quinone oxidoreductase; 92.2 0.29 9.8E-06 45.4 7.2 92 141-257 124-218 (302)
380 3l9w_A Glutathione-regulated p 92.1 0.37 1.3E-05 47.4 8.3 93 143-256 4-101 (413)
381 3nx4_A Putative oxidoreductase 92.1 0.21 7.1E-06 46.8 6.2 91 145-257 149-241 (324)
382 3ggo_A Prephenate dehydrogenas 92.0 0.99 3.4E-05 42.5 10.8 93 143-257 33-128 (314)
383 3iht_A S-adenosyl-L-methionine 91.7 0.16 5.4E-06 43.3 4.3 104 141-255 39-145 (174)
384 3gg2_A Sugar dehydrogenase, UD 91.7 3.2 0.00011 41.1 14.6 139 144-293 3-158 (450)
385 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.64 2.2E-05 41.9 8.6 104 129-260 17-124 (223)
386 2py6_A Methyltransferase FKBM; 91.6 0.37 1.3E-05 47.2 7.5 48 141-188 225-274 (409)
387 1yqd_A Sinapyl alcohol dehydro 91.4 0.6 2.1E-05 44.7 8.8 95 142-257 187-282 (366)
388 2vz8_A Fatty acid synthase; tr 91.3 0.047 1.6E-06 65.3 0.8 96 145-255 1243-1346(2512)
389 2y0c_A BCEC, UDP-glucose dehyd 91.1 2.2 7.5E-05 42.6 12.7 108 142-257 7-128 (478)
390 3c85_A Putative glutathione-re 91.0 0.68 2.3E-05 39.4 7.8 96 143-257 39-139 (183)
391 3k96_A Glycerol-3-phosphate de 91.0 2 6.9E-05 41.1 11.9 140 143-304 29-181 (356)
392 1xa0_A Putative NADPH dependen 90.9 0.43 1.5E-05 44.7 7.0 93 145-257 152-246 (328)
393 1lss_A TRK system potassium up 90.7 3.3 0.00011 32.7 11.4 94 143-255 4-101 (140)
394 2cf5_A Atccad5, CAD, cinnamyl 90.7 0.49 1.7E-05 45.1 7.3 95 142-257 180-275 (357)
395 2o3j_A UDP-glucose 6-dehydroge 90.5 3 0.0001 41.6 13.1 110 144-259 10-137 (481)
396 3llv_A Exopolyphosphatase-rela 90.3 1.2 4.3E-05 35.9 8.5 69 144-225 7-79 (141)
397 4a0s_A Octenoyl-COA reductase/ 90.1 0.52 1.8E-05 46.4 7.0 98 141-257 219-336 (447)
398 4a7p_A UDP-glucose dehydrogena 90.0 2.9 0.0001 41.4 12.4 140 142-293 7-161 (446)
399 1l7d_A Nicotinamide nucleotide 89.9 1.2 4.1E-05 43.1 9.3 42 142-184 171-213 (384)
400 1zcj_A Peroxisomal bifunctiona 89.7 2.2 7.4E-05 42.4 11.3 102 143-258 37-151 (463)
401 3d0o_A L-LDH 1, L-lactate dehy 89.7 3.3 0.00011 38.9 12.1 110 142-260 5-125 (317)
402 3p2y_A Alanine dehydrogenase/p 89.7 0.94 3.2E-05 44.1 8.3 109 142-257 183-302 (381)
403 3pqe_A L-LDH, L-lactate dehydr 89.7 4.2 0.00014 38.5 12.8 105 142-257 4-122 (326)
404 3krt_A Crotonyl COA reductase; 89.6 0.79 2.7E-05 45.2 7.9 105 141-257 227-344 (456)
405 2g1u_A Hypothetical protein TM 89.2 0.58 2E-05 38.8 5.7 98 142-259 18-120 (155)
406 2aef_A Calcium-gated potassium 89.1 2.4 8.2E-05 37.4 10.1 95 143-259 9-107 (234)
407 4dio_A NAD(P) transhydrogenase 89.0 1.4 4.8E-05 43.2 9.1 109 142-257 189-312 (405)
408 1x13_A NAD(P) transhydrogenase 88.8 1.7 5.8E-05 42.4 9.6 42 142-184 171-213 (401)
409 1tt7_A YHFP; alcohol dehydroge 88.8 0.37 1.3E-05 45.2 4.7 91 145-257 153-247 (330)
410 1ldn_A L-lactate dehydrogenase 88.7 7 0.00024 36.6 13.6 110 142-260 5-125 (316)
411 4a27_A Synaptic vesicle membra 88.7 0.3 1E-05 46.4 4.0 96 141-257 141-238 (349)
412 1jw9_B Molybdopterin biosynthe 88.6 0.65 2.2E-05 42.2 6.0 33 143-176 31-65 (249)
413 4e12_A Diketoreductase; oxidor 88.5 0.89 3E-05 41.9 7.0 104 143-259 4-123 (283)
414 2vn8_A Reticulon-4-interacting 88.4 0.71 2.4E-05 44.2 6.5 97 141-257 182-280 (375)
415 3l4b_C TRKA K+ channel protien 88.2 2.5 8.6E-05 36.9 9.5 96 145-259 2-101 (218)
416 3h7a_A Short chain dehydrogena 87.7 4.7 0.00016 36.0 11.3 77 142-225 6-92 (252)
417 3grk_A Enoyl-(acyl-carrier-pro 87.5 12 0.0004 34.2 14.1 107 142-256 30-168 (293)
418 3lyl_A 3-oxoacyl-(acyl-carrier 87.2 8.6 0.00029 33.8 12.6 78 142-225 4-91 (247)
419 1wma_A Carbonyl reductase [NAD 87.2 3.5 0.00012 36.6 10.1 78 142-225 3-91 (276)
420 2q3e_A UDP-glucose 6-dehydroge 86.9 6.5 0.00022 38.9 12.7 109 144-258 6-132 (467)
421 3oig_A Enoyl-[acyl-carrier-pro 86.9 7.8 0.00027 34.5 12.3 78 142-225 6-96 (266)
422 3sju_A Keto reductase; short-c 86.8 8.8 0.0003 34.8 12.7 78 142-225 23-110 (279)
423 3ado_A Lambda-crystallin; L-gu 86.7 2.5 8.5E-05 40.0 9.0 106 141-259 4-125 (319)
424 1eg2_A Modification methylase 86.7 0.65 2.2E-05 44.0 4.9 47 141-189 241-290 (319)
425 1rjd_A PPM1P, carboxy methyl t 86.6 3.6 0.00012 39.1 10.2 44 143-188 98-142 (334)
426 1f0y_A HCDH, L-3-hydroxyacyl-C 86.4 2.7 9.2E-05 38.8 9.0 102 143-257 15-136 (302)
427 3eod_A Protein HNR; response r 86.4 7.2 0.00025 30.0 10.4 78 166-255 7-84 (130)
428 1a5z_A L-lactate dehydrogenase 86.3 9.4 0.00032 35.7 12.9 103 145-256 2-115 (319)
429 3h8v_A Ubiquitin-like modifier 86.2 0.82 2.8E-05 42.9 5.3 33 143-176 36-70 (292)
430 3o8q_A Shikimate 5-dehydrogena 85.9 18 0.00063 33.2 14.4 95 115-226 100-197 (281)
431 1zud_1 Adenylyltransferase THI 85.9 1.6 5.5E-05 39.6 7.0 34 143-176 28-62 (251)
432 1y6j_A L-lactate dehydrogenase 85.8 3.4 0.00012 38.8 9.5 109 142-260 6-125 (318)
433 2g5c_A Prephenate dehydrogenas 85.8 3.4 0.00012 37.5 9.3 91 144-256 2-95 (281)
434 3av4_A DNA (cytosine-5)-methyl 85.7 22 0.00076 40.0 17.2 151 143-305 851-1033(1330)
435 3imf_A Short chain dehydrogena 85.6 6.4 0.00022 35.1 10.9 77 143-225 6-92 (257)
436 4g65_A TRK system potassium up 85.6 3.5 0.00012 40.9 9.9 72 141-223 233-307 (461)
437 3tjr_A Short chain dehydrogena 85.5 8.7 0.0003 35.3 12.0 78 142-225 30-117 (301)
438 3ijr_A Oxidoreductase, short c 85.4 10 0.00034 34.6 12.4 110 142-257 46-182 (291)
439 3tqh_A Quinone oxidoreductase; 85.3 1.7 5.9E-05 40.4 7.2 92 141-257 151-245 (321)
440 3o38_A Short chain dehydrogena 85.2 8.9 0.00031 34.1 11.7 78 142-225 21-110 (266)
441 1lnq_A MTHK channels, potassiu 85.0 4.4 0.00015 37.9 9.9 94 143-258 115-212 (336)
442 1ez4_A Lactate dehydrogenase; 85.0 7.4 0.00025 36.5 11.4 110 142-260 4-123 (318)
443 3pxx_A Carveol dehydrogenase; 84.9 13 0.00044 33.4 12.8 78 142-225 9-108 (287)
444 3vku_A L-LDH, L-lactate dehydr 84.8 11 0.00036 35.7 12.4 108 141-257 7-125 (326)
445 1zkd_A DUF185; NESG, RPR58, st 84.5 1.5 5.3E-05 42.6 6.5 48 140-187 78-132 (387)
446 2xxj_A L-LDH, L-lactate dehydr 84.3 10 0.00035 35.4 12.1 105 145-260 2-118 (310)
447 4ft4_B DNA (cytosine-5)-methyl 84.3 22 0.00074 37.4 15.9 55 144-207 213-272 (784)
448 3v2g_A 3-oxoacyl-[acyl-carrier 84.3 21 0.00073 32.1 14.0 109 142-256 30-164 (271)
449 3h2s_A Putative NADH-flavin re 84.3 3.5 0.00012 35.5 8.3 99 145-256 2-103 (224)
450 1mv8_A GMD, GDP-mannose 6-dehy 84.2 15 0.0005 35.9 13.6 105 145-257 2-123 (436)
451 2uyo_A Hypothetical protein ML 84.1 3 0.0001 39.2 8.2 113 142-259 102-220 (310)
452 4dcm_A Ribosomal RNA large sub 83.9 4.2 0.00014 39.1 9.4 116 143-279 39-154 (375)
453 2zqz_A L-LDH, L-lactate dehydr 83.9 8 0.00027 36.4 11.1 110 142-260 8-127 (326)
454 3rkr_A Short chain oxidoreduct 83.6 8.9 0.00031 34.2 11.0 78 142-225 28-115 (262)
455 3r1i_A Short-chain type dehydr 83.6 8.9 0.0003 34.7 11.1 78 142-225 31-118 (276)
456 3ucx_A Short chain dehydrogena 83.6 18 0.00062 32.2 13.1 77 142-224 10-96 (264)
457 2i6t_A Ubiquitin-conjugating e 83.6 5.1 0.00017 37.5 9.5 100 143-256 14-124 (303)
458 2dpo_A L-gulonate 3-dehydrogen 83.6 2.6 9.1E-05 39.7 7.6 103 143-258 6-124 (319)
459 4aj2_A L-lactate dehydrogenase 83.5 16 0.00054 34.6 13.1 107 142-257 18-136 (331)
460 2km1_A Protein DRE2; yeast, an 83.5 0.78 2.7E-05 38.1 3.3 75 175-255 21-96 (136)
461 3t4x_A Oxidoreductase, short c 83.4 16 0.00053 32.7 12.6 78 142-225 9-94 (267)
462 4e6p_A Probable sorbitol dehyd 83.2 18 0.00062 32.1 12.9 75 142-225 7-91 (259)
463 3ojo_A CAP5O; rossmann fold, c 83.1 7.2 0.00025 38.4 10.8 136 142-292 10-163 (431)
464 4dkj_A Cytosine-specific methy 83.0 5.3 0.00018 39.0 9.7 45 144-188 11-60 (403)
465 3ic5_A Putative saccharopine d 83.0 13 0.00045 28.0 10.8 68 143-224 5-77 (118)
466 2ae2_A Protein (tropinone redu 82.9 8.5 0.00029 34.2 10.5 78 142-225 8-96 (260)
467 1zej_A HBD-9, 3-hydroxyacyl-CO 82.7 5.3 0.00018 37.2 9.2 98 141-259 10-109 (293)
468 2rhc_B Actinorhodin polyketide 82.7 21 0.00072 32.1 13.2 77 143-225 22-108 (277)
469 1dlj_A UDP-glucose dehydrogena 82.6 6.4 0.00022 38.1 10.2 106 145-260 2-120 (402)
470 3f1l_A Uncharacterized oxidore 82.6 16 0.00054 32.4 12.2 79 142-225 11-101 (252)
471 3hv2_A Response regulator/HD d 82.5 5 0.00017 32.1 8.1 79 167-257 15-93 (153)
472 3lua_A Response regulator rece 82.0 5.5 0.00019 31.2 8.0 68 167-245 5-75 (140)
473 3tum_A Shikimate dehydrogenase 82.0 30 0.001 31.6 14.9 133 111-261 93-229 (269)
474 4imr_A 3-oxoacyl-(acyl-carrier 81.9 7.5 0.00026 35.2 9.8 78 142-225 32-118 (275)
475 3tsc_A Putative oxidoreductase 81.8 21 0.00071 32.0 12.9 78 142-225 10-110 (277)
476 3l77_A Short-chain alcohol deh 81.8 23 0.00078 30.7 12.8 78 143-225 2-89 (235)
477 2v6b_A L-LDH, L-lactate dehydr 81.8 7.9 0.00027 35.9 10.1 102 145-255 2-114 (304)
478 3ioy_A Short-chain dehydrogena 81.8 16 0.00055 33.8 12.3 80 142-225 7-96 (319)
479 4g65_A TRK system potassium up 81.8 5.2 0.00018 39.7 9.3 68 143-222 3-74 (461)
480 3cu5_A Two component transcrip 81.7 15 0.00052 28.8 10.7 79 168-255 4-82 (141)
481 3grc_A Sensor protein, kinase; 81.7 6.5 0.00022 30.7 8.3 78 167-255 7-85 (140)
482 3u5t_A 3-oxoacyl-[acyl-carrier 81.7 13 0.00046 33.3 11.4 110 142-257 26-161 (267)
483 3pi7_A NADH oxidoreductase; gr 81.7 1 3.5E-05 42.6 3.9 95 144-257 166-263 (349)
484 3pk0_A Short-chain dehydrogena 81.6 15 0.00051 32.8 11.7 79 142-225 9-97 (262)
485 3pid_A UDP-glucose 6-dehydroge 81.5 8.3 0.00028 38.0 10.6 106 143-258 36-154 (432)
486 3rui_A Ubiquitin-like modifier 81.5 4.3 0.00015 38.8 8.2 34 143-176 34-68 (340)
487 3pgx_A Carveol dehydrogenase; 81.4 22 0.00075 31.9 12.9 78 142-225 14-114 (280)
488 4e7p_A Response regulator; DNA 81.4 9 0.00031 30.4 9.2 80 167-256 21-100 (150)
489 3kto_A Response regulator rece 81.4 6.5 0.00022 30.7 8.2 79 167-255 7-85 (136)
490 3mog_A Probable 3-hydroxybutyr 81.4 4.1 0.00014 40.7 8.4 102 143-258 5-121 (483)
491 4e21_A 6-phosphogluconate dehy 81.3 10 0.00035 36.2 11.0 93 143-258 22-116 (358)
492 3oj0_A Glutr, glutamyl-tRNA re 81.3 13 0.00045 29.8 10.3 84 143-255 21-108 (144)
493 1ae1_A Tropinone reductase-I; 81.3 22 0.00075 31.8 12.8 78 142-225 20-108 (273)
494 3cg0_A Response regulator rece 81.3 4.4 0.00015 31.6 7.1 78 166-255 9-87 (140)
495 4fs3_A Enoyl-[acyl-carrier-pro 81.2 18 0.00062 32.2 12.1 78 142-225 5-95 (256)
496 3cea_A MYO-inositol 2-dehydrog 80.9 12 0.00043 34.7 11.3 70 142-225 7-80 (346)
497 4fc7_A Peroxisomal 2,4-dienoyl 80.9 17 0.00059 32.7 11.9 78 143-225 27-114 (277)
498 3ged_A Short-chain dehydrogena 80.8 19 0.00066 32.4 12.1 72 144-225 3-84 (247)
499 3b1f_A Putative prephenate deh 80.8 4.3 0.00015 37.0 7.8 91 143-255 6-99 (290)
500 2zyd_A 6-phosphogluconate dehy 80.7 13 0.00044 37.0 11.8 96 142-255 14-111 (480)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.1e-65 Score=486.87 Aligned_cols=272 Identities=34% Similarity=0.645 Sum_probs=245.0
Q ss_pred cccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHH
Q 017607 78 PGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVL 157 (369)
Q Consensus 78 ~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~ 157 (369)
++..++++++++|++++|+||+|.|+++..||++|+|||.+|++++||+.|||||+|+|++.|++|++||+||+|+|+++
T Consensus 19 ~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~ 98 (294)
T 3o4f_A 19 DQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAML 98 (294)
T ss_dssp SSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHH
T ss_pred CCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHH
Confidence 56688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCcccccc
Q 017607 158 REISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVE 236 (369)
Q Consensus 158 ~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~ 236 (369)
+++++|+++++|++||||++|+++||++|+..+. .+++||++++++||++|++.. .++||+||+|+++|.+++..||+
T Consensus 99 revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D~~dp~~~~~~L~t 177 (294)
T 3o4f_A 99 REVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESLFT 177 (294)
T ss_dssp HHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEESCCCCCCTTCCSSC
T ss_pred HHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEeCCCcCCCchhhcC
Confidence 9999999999999999999999999999998755 478999999999999999765 57899999999999999999999
Q ss_pred HHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCC
Q 017607 237 KPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPIN 316 (369)
Q Consensus 237 ~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~ 316 (369)
.+||+.++++|+|||++++|++++|.+.+.+..+.++++++|+ .|.++++.||+||+|.|||++|||+.++.... .
T Consensus 178 ~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~as~~~~~~~~~---~ 253 (294)
T 3o4f_A 178 SAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHLS---T 253 (294)
T ss_dssp CHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEEESCTTGGGCC---H
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeEECCCccccCC---h
Confidence 9999999999999999999999999999999999999999999 78999999999999999999999985543321 1
Q ss_pred chhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 317 PIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 317 ~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
+.. ..+......+|||||+++|+|||+||+|+|++|+.
T Consensus 254 ~~~-~~~~~~~~~~~~yyn~~~h~aaF~lP~~~~~~l~~ 291 (294)
T 3o4f_A 254 EII-QARFLASGLKCRYYNPAIHTAAFALPQYLQDALAS 291 (294)
T ss_dssp HHH-HHHHHSSCCCCSSCCHHHHHHHTCCCHHHHHHTTS
T ss_pred HHH-hHHHHhhCCCceEECHHHHHHHccCcHHHHHHHhc
Confidence 111 11222345689999999999999999999999975
No 2
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=4.4e-56 Score=426.56 Aligned_cols=276 Identities=34% Similarity=0.646 Sum_probs=230.2
Q ss_pred CCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcc
Q 017607 74 NPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGD 153 (369)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~ 153 (369)
+++||+.+++++++++|++++|+||+|.|+++..+|++|++||.+|++++|++.|+||++|++++.+++|++|||||||+
T Consensus 15 ~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~ 94 (294)
T 3adn_A 15 ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGD 94 (294)
T ss_dssp CCSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTT
T ss_pred cccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCCh
Confidence 46799999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCcc
Q 017607 154 GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQ 232 (369)
Q Consensus 154 G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~ 232 (369)
|.++++++++.+..+|++||||+++++.|+++++..+. .+++++++++++|++++++.. +++||+||+|+++|.++..
T Consensus 95 G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fDvIi~D~~~p~~~~~ 173 (294)
T 3adn_A 95 GAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGE 173 (294)
T ss_dssp CHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-CCCEEEEEECC--------
T ss_pred hHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-CCCccEEEECCCCccCcch
Confidence 99999999998888999999999999999999987643 366889999999999998653 5789999999999998888
Q ss_pred ccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCCcEEEEEeecCCCCCCCC
Q 017607 233 ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFV 312 (369)
Q Consensus 233 ~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~~~~ 312 (369)
.+++.+||+.++++|+|||++++++++++...+.+..+.++++++|+ .+.+++..+|+||+|.|||++||++.++.++
T Consensus 174 ~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f~~as~~~~~~~~- 251 (294)
T 3adn_A 174 SLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHL- 251 (294)
T ss_dssp --CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCS-EEEEEEEECTTSSSSEEEEEEEESCTTCSCC-
T ss_pred hccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCC-CeEEEEEEecccCCCceEEEEEeCCcccccC-
Confidence 89999999999999999999999999999988899999999999999 7888899999999999999999997544321
Q ss_pred CCCCchhhhc-ccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcc
Q 017607 313 NPINPIEKLE-GADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 356 (369)
Q Consensus 313 ~p~~~~~~~~-~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~~ 356 (369)
+.+.+. +......++||||+++|+|||+||+|++++|...
T Consensus 252 ----~~~~~~~~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 292 (294)
T 3adn_A 252 ----STEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp ----HHHHCCCCCC----CCSSCCHHHHHHTTCCCHHHHHHCCCC
T ss_pred ----CHHHHHHHHhccCCCCeEECHHHHHHHhcCcHHHHHHhhcc
Confidence 112121 1122334899999999999999999999999643
No 3
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=4.6e-54 Score=419.34 Aligned_cols=297 Identities=68% Similarity=1.267 Sum_probs=258.3
Q ss_pred ccccccccccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecc
Q 017607 43 LDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTE 122 (369)
Q Consensus 43 ~~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~ 122 (369)
+...+++.+++.||+|. .++||+++++++++++|++++|+||+|.|+++..||+.|++||.+|+++
T Consensus 35 ~~~~~~~~~~~~w~~e~--------------~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~ 100 (334)
T 1xj5_A 35 KEPACFSTVIPGWFSEM--------------SPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTE 100 (334)
T ss_dssp ------CCCCSSEEEEC--------------CTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEET
T ss_pred CCCCCCcccccceEEEe--------------ccCCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCc
Confidence 34677888899999998 5678999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE
Q 017607 123 KDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI 202 (369)
Q Consensus 123 ~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~ 202 (369)
++++.|+||++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.+++++++++++
T Consensus 101 ~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~ 180 (334)
T 1xj5_A 101 RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI 180 (334)
T ss_dssp TTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE
T ss_pred CcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE
Confidence 99999999999999988888999999999999999999999777899999999999999999997653334568999999
Q ss_pred cchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCe
Q 017607 203 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSV 282 (369)
Q Consensus 203 ~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v 282 (369)
+|+.+++...++++||+|++|+++|.++...+++.+|++.++++|+|||+++++++++|.....+..+.+.++++|+..+
T Consensus 181 ~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~ 260 (334)
T 1xj5_A 181 GDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSV 260 (334)
T ss_dssp SCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCE
T ss_pred CCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCcccc
Confidence 99999987554568999999999888877778899999999999999999999999999988888889999999999667
Q ss_pred eEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 283 HYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 283 ~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
.++++.+|+|++|.|||++||++.++.++.+|++.++..+ . ....++||||+++|+|||+||+|+++.|++
T Consensus 261 ~~~~~~vP~y~~g~~gf~~as~~~~~~~~~~~~~~~~~~~-~-~~~~~~~yy~~~~h~~~f~lp~~~~~~l~~ 331 (334)
T 1xj5_A 261 NYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESS-S-KSNGPLKFYNAEIHSAAFCLPSFAKKVIES 331 (334)
T ss_dssp EEEEEECTTSGGGEEEEEEEECSSSCCCSSSCSSCCCSGG-G-TTTCCCSSCCHHHHHHTTCCCHHHHHHHC-
T ss_pred ceEEEeCCcccCCceEEEEcccCCccccccCchhhhhhhh-h-cccCCceEECHHHHHHHhcCcHHHHHHHhc
Confidence 8888999999999999999999765566666665443211 1 134579999999999999999999999974
No 4
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=3.7e-53 Score=403.90 Aligned_cols=280 Identities=53% Similarity=0.930 Sum_probs=249.4
Q ss_pred ccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHH
Q 017607 53 SGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMI 132 (369)
Q Consensus 53 ~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l 132 (369)
+.||+|. +++||+.++++++++++++++|+||+|.|+++..+|++|++||.+|+++++++.|+||+
T Consensus 3 ~~w~~e~--------------~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l 68 (283)
T 2i7c_A 3 KKWFSEF--------------SIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMM 68 (283)
T ss_dssp CCEEEEC--------------CTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHH
T ss_pred ceeEEEc--------------ccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHH
Confidence 4699987 45679999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC
Q 017607 133 AHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV 212 (369)
Q Consensus 133 ~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~ 212 (369)
+|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++++|+.+++...
T Consensus 69 ~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~ 148 (283)
T 2i7c_A 69 THVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV 148 (283)
T ss_dssp HHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC
T ss_pred HHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC
Confidence 99999888899999999999999999999997788999999999999999999986643455789999999999998764
Q ss_pred CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeec
Q 017607 213 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTY 292 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~ 292 (369)
+++||+|++|+++|.++...+++.+|++.++++|+|||++++++.++|...+.+..+.++++++|+ .+.+++..+|+|
T Consensus 149 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vP~y 226 (283)
T 2i7c_A 149 -TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK-KVEYANISIPTY 226 (283)
T ss_dssp -CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS-EEEEEEEECTTS
T ss_pred -CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCC-ceEEEEEEcCCc
Confidence 568999999999998888889999999999999999999999999999888889999999999999 788889999999
Q ss_pred cCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 293 PSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 293 p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
|+|+|||++|||+ +.++.+|++.+... ....+||||+++|+|||+||+|+++.|++
T Consensus 227 ~~g~~g~~~~s~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 282 (283)
T 2i7c_A 227 PCGCIGILCCSKT--DTGLTKPNKKLESK-----EFADLKYYNYENHSAAFKLPAFLLKEIEN 282 (283)
T ss_dssp GGGEEEEEEEESS--TTCSSSCSSCCCSG-----GGTTCSSCCHHHHHHTTCCCHHHHHHHTT
T ss_pred CCCcEEEEEEeCC--CccccCchhhhhhh-----hhhcCceECHHHHHHHhcCcHHHHHHhhc
Confidence 9999999999987 23444555433211 11256999999999999999999999863
No 5
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=2.3e-53 Score=411.25 Aligned_cols=299 Identities=48% Similarity=0.906 Sum_probs=239.0
Q ss_pred ccccccceeccc---------cCCCcccccccc----CCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEc
Q 017607 49 STVVSGWFSESQ---------STSDKTGKTMYF----NNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLD 115 (369)
Q Consensus 49 ~~~~~~w~~e~~---------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lD 115 (369)
+.++++||+|.. ..-++++++.|+ .+++||+..+++++++++++.+|+||+|.|+++..+|+.|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ld 81 (314)
T 2b2c_A 2 NKLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLD 81 (314)
T ss_dssp -CBCSSEEEEECSCCC-----------------------CCCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEET
T ss_pred CcccccceEeeccccccccccccccccccccccccccccccCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEEC
Confidence 345789999972 112567778887 4578999999999999999999999999999999999999999
Q ss_pred CeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCC
Q 017607 116 GIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFED 195 (369)
Q Consensus 116 g~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~ 195 (369)
|.+|+++++++.|+||++|+++..++++++|||||||+|.++++++++.+..+|++||||+.+++.|+++++..+.++++
T Consensus 82 g~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~ 161 (314)
T 2b2c_A 82 GIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSH 161 (314)
T ss_dssp TEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGC
T ss_pred CEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999988888899999999999999999999977889999999999999999999765333456
Q ss_pred CCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHH
Q 017607 196 PRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICR 275 (369)
Q Consensus 196 ~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~ 275 (369)
++++++.+|+.+++... +++||+|++|+++|.++...+++.+|++.++++|+|||+++++.+++|...+.++.+.+.++
T Consensus 162 ~rv~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 240 (314)
T 2b2c_A 162 PKLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNR 240 (314)
T ss_dssp TTEEEECSCHHHHHHHC-TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred CCEEEEEChHHHHHHhc-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHH
Confidence 89999999999998763 56899999999998877777888999999999999999999999999988888999999999
Q ss_pred HHCCCCeeEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHh
Q 017607 276 ETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 353 (369)
Q Consensus 276 ~~F~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l 353 (369)
++|+ .+.++++.+|+||+|+|||++|||+. ..++.+|++.+... +. ...++||||+++|+|||+||+|++++|
T Consensus 241 ~vF~-~v~~~~~~iP~~~~g~~g~~~ask~~-~~~~~~~~~~~~~~-~~--~~~~~~yy~~~~h~~~f~lp~~~~~~l 313 (314)
T 2b2c_A 241 KIFP-AVTYAQSIVSTYPSGSMGYLICAKNA-NRDVTTPARTLTAE-QI--KALNLRFYNSEVHKAAFVLPQFVKNAL 313 (314)
T ss_dssp HHCS-EEEEEEEECTTSGGGEEEEEEEESST-TCCTTSCSSCCCHH-HH--HHTTCSSCCHHHHHHTTCCCHHHHHTC
T ss_pred HHCC-cceEEEEEecCcCCCceEEEEEeCCC-cccccCchhhhhHH-hh--cccCCeEECHHHHHHHccCcHHHHHhh
Confidence 9999 78888999999999999999999872 22344555433211 11 112789999999999999999999976
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=3.2e-53 Score=408.47 Aligned_cols=288 Identities=48% Similarity=0.971 Sum_probs=242.1
Q ss_pred cccccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhH
Q 017607 48 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECA 127 (369)
Q Consensus 48 ~~~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~ 127 (369)
+..+++.||+|. .++||+.++++++++++|+++|+||+|.|+++..+|++|++||.+|+++++++.
T Consensus 15 ~~~~~~~w~~e~--------------~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~ 80 (304)
T 2o07_A 15 PAAIREGWFRET--------------CSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFS 80 (304)
T ss_dssp ---CBTTEEEEC--------------CTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHH
T ss_pred CcccccceEEEe--------------ccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchH
Confidence 444577899998 567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
|++|++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+|+.+
T Consensus 81 y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 81 YQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp HHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 99999999988888999999999999999999999977789999999999999999999864333456899999999999
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEE
Q 017607 208 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWA 287 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~ 287 (369)
++... +++||+|++|++++.+++..+++.+|++.++++|+|||+++++..++|...+..+.+.+.++++|+ .+.+++.
T Consensus 161 ~l~~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~-~v~~~~~ 238 (304)
T 2o07_A 161 FMKQN-QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFP-VVAYAYC 238 (304)
T ss_dssp HHHTC-SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCS-EEEEEEE
T ss_pred HHhhC-CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCC-CceeEEE
Confidence 98753 468999999999988777778888999999999999999999988889888888999999999999 7889989
Q ss_pred EEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 288 SVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 288 ~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
.+|+||+|.|||++||++ +..++..|++.+...+ ....++||||+++|+|||+||+|+++.|++
T Consensus 239 ~vP~~~~g~~g~~~as~~-~~~~~~~~~~~~~~~~---~~~~~~~~y~~~~h~~~f~lp~~~~~~~~~ 302 (304)
T 2o07_A 239 TIPTYPSGQIGFMLCSKN-PSTNFQEPVQPLTQQQ---VAQMQLKYYNSDVHRAAFVLPEFARKALND 302 (304)
T ss_dssp ECTTSGGGEEEEEEEESS-TTCCSSSCSSCCCHHH---HHHTTCSSCCHHHHHHTTCCCHHHHHHHHC
T ss_pred EeccccCcceEEEEEeCC-cccccccchhhhhHhh---hcccCCeEECHHHHHHHhcCcHHHHHHhhc
Confidence 999999999999999987 3334445544333111 011478999999999999999999999974
No 7
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=3.9e-53 Score=402.31 Aligned_cols=272 Identities=38% Similarity=0.693 Sum_probs=244.2
Q ss_pred cceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHH
Q 017607 54 GWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIA 133 (369)
Q Consensus 54 ~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~ 133 (369)
.||+|.++ |+.++++++++++++.+|+||+|.|+++..+|++|++||..|+++.|++.|||||+
T Consensus 3 ~w~~e~~~----------------~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~ 66 (275)
T 1iy9_A 3 LWYTEKQT----------------KNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVA 66 (275)
T ss_dssp EEEEEEEE----------------TTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHH
T ss_pred ccEEEecC----------------CCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHH
Confidence 59999754 78999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC
Q 017607 134 HLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 134 ~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~ 213 (369)
|++++.++++++|||||||+|.++++++++.+..+|++||||+.+++.|+++++..+.++++++++++.+|+++++...
T Consensus 67 ~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~- 145 (275)
T 1iy9_A 67 HVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS- 145 (275)
T ss_dssp HHHHHHSSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-
T ss_pred HHHHhhCCCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-
Confidence 9998878899999999999999999999997778999999999999999999987644566789999999999998764
Q ss_pred CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeecc
Q 017607 214 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYP 293 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p 293 (369)
+++||+|++|+++|.+++..+++.+|++.++++|+|||+++++..++|.+.+.++.+.++++++|+ .+.+++..+|+||
T Consensus 146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~ 224 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFP-ITKLYTANIPTYP 224 (275)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS-EEEEEEECCTTSG
T ss_pred CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCC-CeEEEEEecCccc
Confidence 468999999999988888889999999999999999999999999998888889999999999999 6888889999999
Q ss_pred CCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHh
Q 017607 294 SGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 353 (369)
Q Consensus 294 ~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l 353 (369)
+|.|+|++|||+..|.++. . . .....++||||+++|+|||+||+|++++|
T Consensus 225 ~g~w~~~~ask~~~~~~~~-------~--~-~~~~~~~~~~~~~~~~~~f~lp~~~~~~~ 274 (275)
T 1iy9_A 225 SGLWTFTIGSKKYDPLAVE-------D--S-RFFDIETKYYTKDIHKAAFVLPKFVSDLI 274 (275)
T ss_dssp GGCEEEEEEESSCCTTCCC-------G--G-GCCCCCCSSCCHHHHHHTTCCCHHHHTTC
T ss_pred CcceEEEEeeCCCCccccc-------h--h-hccccCCeEeCHHHHHHHcCCCHHHHHhh
Confidence 9999999999975443321 0 1 12235789999999999999999999876
No 8
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=3.7e-51 Score=396.89 Aligned_cols=281 Identities=53% Similarity=0.917 Sum_probs=246.9
Q ss_pred ccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHH
Q 017607 51 VVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQE 130 (369)
Q Consensus 51 ~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e 130 (369)
.+..||+|. ..+||+.++++++++++++++|+||+|.|+++..+|+.|++||.+|++++|++.|+|
T Consensus 39 ~~~~w~~e~--------------~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e 104 (321)
T 2pt6_A 39 FSKKWFSEF--------------SIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHE 104 (321)
T ss_dssp --CCEEEEC--------------CTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHH
T ss_pred ccceEEEEe--------------ccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHH
Confidence 577899998 456899999999999999999999999999999899999999999999999999999
Q ss_pred HHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh
Q 017607 131 MIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR 210 (369)
Q Consensus 131 ~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~ 210 (369)
+++|+++..++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+|+.+++.
T Consensus 105 ~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 105 MMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 184 (321)
T ss_dssp HHHHHHHHHSSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh
Confidence 99999988888899999999999999999999977789999999999999999998764333456899999999999986
Q ss_pred hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEe
Q 017607 211 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVP 290 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP 290 (369)
.. +++||+|++|.++|.++...+++.+|++.++++|+|||+++++..+++...+.++.+.+++++.|+ .+.++...+|
T Consensus 185 ~~-~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp 262 (321)
T 2pt6_A 185 NV-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK-KVEYANISIP 262 (321)
T ss_dssp HC-CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCS-EEEEEEEECT
T ss_pred hc-CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC-CeEEEEEEec
Confidence 54 468999999999888877788889999999999999999999988888888889999999999999 7888889999
Q ss_pred eccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCC-CCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 291 TYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHK-RELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 291 ~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~-~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
+||+|.|+|++||++..|.++.. + +..... .++||||+++|+|||+||+|++++|+.
T Consensus 263 ~~~~g~w~f~~as~~~~p~~~~~--~------~~~~~~~~~~~~y~~~~h~~~f~lp~~~~~~~~~ 320 (321)
T 2pt6_A 263 TYPCGCIGILCCSKTDTGLTKPN--K------KLESKEFADLKYYNYENHSAAFKLPAFLLKEIEN 320 (321)
T ss_dssp TSGGGEEEEEEEESSTTCSSSCS--S------CCCSGGGTTCSSCCHHHHHHTTCCCHHHHHHTSC
T ss_pred cccCceEEEEEeeCCCCccchhH--H------HHHhccCCCCeEECHHHHHHHhCCcHHHHHHHhh
Confidence 99999999999999855543210 1 111111 378999999999999999999999863
No 9
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=4.6e-51 Score=391.94 Aligned_cols=287 Identities=34% Similarity=0.644 Sum_probs=241.5
Q ss_pred cccccccccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeeccc
Q 017607 44 DAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEK 123 (369)
Q Consensus 44 ~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~ 123 (369)
...+++ ....||+|.+ . ||+.++++.++++|++++|+||+|.|+++..+|+.|++||.+|++++
T Consensus 8 ~~~~~~-~~~~w~~e~~--------------~-~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~ 71 (296)
T 1inl_A 8 ERELQP-RQHLWYFEYY--------------T-GNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEK 71 (296)
T ss_dssp CCCCCC-CSSEEEEEEC--------------T-TSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETT
T ss_pred HhhcCC-CCCceEEEec--------------C-CCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeeccc
Confidence 344555 6778999972 2 68899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc
Q 017607 124 DECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG 203 (369)
Q Consensus 124 de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~ 203 (369)
|++.|+|+++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+
T Consensus 72 de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~ 151 (296)
T 1inl_A 72 DEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIA 151 (296)
T ss_dssp THHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES
T ss_pred chhHHHHHHhHHHHhcCCCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC
Confidence 99999999999998888889999999999999999999997778999999999999999999976433344689999999
Q ss_pred chHHHHhhCCCCCccEEEEcCCCC-CCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCe
Q 017607 204 DAVEFLRQVPRGKYDAIIVDSSDP-VGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSV 282 (369)
Q Consensus 204 Da~~~l~~~~~~~fDvIi~D~~~p-~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v 282 (369)
|+.+++... +++||+|++|+++| .++...+++.+|++.++++|+|||++++++.+++...+.+..+.++++++|+ .+
T Consensus 152 D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v 229 (296)
T 1inl_A 152 NGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP-IT 229 (296)
T ss_dssp CHHHHGGGC-SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS-EE
T ss_pred cHHHHHhhC-CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC-ce
Confidence 999998654 46899999999988 6777788899999999999999999999999998888889999999999999 67
Q ss_pred eEEEEEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 283 HYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 283 ~~~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
.++...+|+||+|.|+|++|||+..|. ..+.. ++......++||||+++|+|+|+||+|++++|+.
T Consensus 230 ~~~~~~vp~~p~g~~~f~~as~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 295 (296)
T 1inl_A 230 RVYLGFMTTYPSGMWSYTFASKGIDPI------KDFDP-EKVRKFNKELKYYNEEVHVASFALPNFVKKELGL 295 (296)
T ss_dssp EEEEEECTTSTTSEEEEEEEESSCCTT------TTCCH-HHHHTCSSCCSSCCHHHHHHTTCCCHHHHHHTTC
T ss_pred EEEEeecCccCCCceEEEEecCCCChh------hhhhh-hhHhhccCCceecCHHHHHHHcCCcHHHHHHHhh
Confidence 888899999999999999999874332 11110 0111223478999999999999999999999864
No 10
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=3.6e-50 Score=386.96 Aligned_cols=286 Identities=44% Similarity=0.897 Sum_probs=241.3
Q ss_pred ccccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEec---CceeEEEEcCeEeecccch
Q 017607 49 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESL---AYGKVLVLDGIVQLTEKDE 125 (369)
Q Consensus 49 ~~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~---~~G~~l~lDg~~q~~~~de 125 (369)
......||+|. ..+||+..+++++++++++.+|+||+|.|+++. .+|++|++||.+|+++.++
T Consensus 13 ~~~~~~w~~e~--------------~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de 78 (304)
T 3bwc_A 13 ELISGGWFREE--------------NDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDE 78 (304)
T ss_dssp CCCTTSEEEEC--------------CSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTH
T ss_pred ccccCceEEEe--------------ccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccc
Confidence 34456799998 557899999999999999999999999999998 8999999999999999999
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch
Q 017607 126 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 205 (369)
Q Consensus 126 ~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da 205 (369)
+.|+++++++++..++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++.+++++++.+|+
T Consensus 79 ~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 158 (304)
T 3bwc_A 79 FVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDG 158 (304)
T ss_dssp HHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred hHHHHHHhhhhhhcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH
Confidence 99999999999988888999999999999999999999777899999999999999999987543334578999999999
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CCCCeeE
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHY 284 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~ 284 (369)
.+++....+++||+|++|.+++.++...+++.+|++.++++|+|||+++++..++|......+.+.+.+++. |+ .+.+
T Consensus 159 ~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~-~v~~ 237 (304)
T 3bwc_A 159 LAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFA-SVQY 237 (304)
T ss_dssp HHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCS-EEEE
T ss_pred HHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCC-cEEE
Confidence 999864235789999999999888888899999999999999999999999988888878889999999999 99 6788
Q ss_pred EEEEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhh
Q 017607 285 AWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVS 354 (369)
Q Consensus 285 ~~~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~ 354 (369)
+...+|+||+|.|+|++|||+..+ +..+|.+.+... + ...++||||+++|+|||+||+|++++|+
T Consensus 238 ~~~~vP~yp~g~w~f~~as~~~~~-~~~~~~~~~~~~-~---~~~~~~~y~~~~~~~~f~~p~~~~~~~~ 302 (304)
T 3bwc_A 238 ALMHVPTYPCGSIGTLVCSKKAGV-DVTKPLRPVEDM-P---FAKDLKYYDSEMHKASFALPRFARHINN 302 (304)
T ss_dssp EECCCTTSTTSCCEEEEEESSSSC-CTTSCSSCGGGS-G---GGGGCSSCCHHHHHHHTCCCGGGGGGTC
T ss_pred EEeecccccCcceEEEEEeCCccc-cccChhhhhhhh-h---hccCCeEECHHHHHHHcCCCHHHHHHhc
Confidence 888999999999999999987322 223454323211 1 1127999999999999999999999885
No 11
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=2.5e-49 Score=382.81 Aligned_cols=287 Identities=33% Similarity=0.531 Sum_probs=246.2
Q ss_pred cccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHH
Q 017607 52 VSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEM 131 (369)
Q Consensus 52 ~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~ 131 (369)
+..||+|..+ |+.++++++++++++.+|+||+|.|+++..+|++|++||.+|++..+++.|||+
T Consensus 3 ~~~w~~e~~~----------------~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~ 66 (314)
T 1uir_A 3 YGMYFFEHVT----------------PYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHET 66 (314)
T ss_dssp SSCEEEEESS----------------SSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHH
T ss_pred CCceEEEEcC----------------CCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHH
Confidence 4579999743 789999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC-CCCCCEEEEEcchHHHHh
Q 017607 132 IAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLR 210 (369)
Q Consensus 132 l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~ 210 (369)
++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.+ +++++++++.+|+.+++.
T Consensus 67 l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (314)
T 1uir_A 67 LVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE 146 (314)
T ss_dssp HHHHHHHHSSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH
Confidence 9999988889999999999999999999999877789999999999999999999764333 456899999999999986
Q ss_pred hCCCCCccEEEEcCCCCC---CCccccccHHHHHHHHHhccCCceEEecccccc-hhhhHHHHHHHHHHHHCCCCeeEEE
Q 017607 211 QVPRGKYDAIIVDSSDPV---GPAQELVEKPFFDTIAKALRPGGVLCNMAESMW-LHTHLIEDMISICRETFKGSVHYAW 286 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~---~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~-~~~~~~~~i~~~l~~~F~~~v~~~~ 286 (369)
.. +++||+|++|.+++. ++...+++.+|++.++++|+|||+++++..+++ .+.+.++.+.++++++|+ .+.++.
T Consensus 147 ~~-~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~ 224 (314)
T 1uir_A 147 RT-EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFR-YVRSYK 224 (314)
T ss_dssp HC-CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCS-EEEEEE
T ss_pred hc-CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCC-ceEEEE
Confidence 64 568999999999987 767788899999999999999999999988887 667788999999999999 688888
Q ss_pred EEEeeccCCcEEEEEeecCCCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhccCCCCC
Q 017607 287 ASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPT 361 (369)
Q Consensus 287 ~~vP~~p~g~w~f~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~~~~~~~ 361 (369)
+.+|+| +|.|+|++|||+.+|.++. | ..+. .+......++||||+++|+|+|+||+|+++.|+...+...
T Consensus 225 ~~vP~~-~g~~~~~~as~~~~p~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~~~~f~lp~~~~~~~~~~~~~~t 294 (314)
T 1uir_A 225 NHIPGF-FLNFGFLLASDAFDPAAFS-E-GVIE--ARIRERNLALRHLTAPYLEAMFVLPKDLLEALEKETMVST 294 (314)
T ss_dssp EEEGGG-TEEEEEEEEESSSCTTCCC-T-THHH--HHHHHTTCCCSSCCHHHHHHTTCCCHHHHHHHHHCCCCCC
T ss_pred EecCCC-CCeEEEEEEECCCCcccCC-H-HHHH--HHhhccccCccccCHHHHHHHcCCCHHHHHHhhCCCCccc
Confidence 999999 7899999999986555432 2 1121 1111223378999999999999999999999987655443
No 12
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=1.6e-49 Score=378.40 Aligned_cols=271 Identities=33% Similarity=0.569 Sum_probs=233.0
Q ss_pred ccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHH
Q 017607 53 SGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMI 132 (369)
Q Consensus 53 ~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l 132 (369)
+.||+|.++ |+.++++++++++++++|+||+|.|+++..+|+.|++||.+|++++|++.|+|++
T Consensus 2 ~~w~~e~~~----------------~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l 65 (281)
T 1mjf_A 2 ERAFIEWYP----------------RGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPL 65 (281)
T ss_dssp --CEEEEEG----------------GGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHH
T ss_pred CccEEEecC----------------CCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHH
Confidence 569999754 7899999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCC-------CCCCEEEEEcch
Q 017607 133 AHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGF-------EDPRVRLHIGDA 205 (369)
Q Consensus 133 ~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~-------~~~rv~v~~~Da 205 (369)
.|++++.++++++|||||||+|.++++++++ +..+|++||+|+.+++.|++++ ..+.++ .+++++++.+|+
T Consensus 66 ~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~ 143 (281)
T 1mjf_A 66 VHPAMLAHPKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDG 143 (281)
T ss_dssp HHHHHHHSSCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCH
T ss_pred HHHHHhhCCCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECch
Confidence 9998887888999999999999999999999 7789999999999999999998 443234 468999999999
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEE
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYA 285 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~ 285 (369)
.+++.. +++||+|++|.++|.+++..+++.+|++.++++|+|||+++++.++++...+.++.+.++++++|+ .+.++
T Consensus 144 ~~~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~-~v~~~ 220 (281)
T 1mjf_A 144 FEFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFD-RVYYY 220 (281)
T ss_dssp HHHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCS-EEEEE
T ss_pred HHHhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC-ceEEE
Confidence 999876 468999999999988877788899999999999999999999988888888889999999999999 67888
Q ss_pred EEEEeeccCCcEEEEEeecC-CCCCCCCCCCCchhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 017607 286 WASVPTYPSGIIGFLICSTE-GPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 355 (369)
Q Consensus 286 ~~~vP~~p~g~w~f~~ask~-~~~~~~~~p~~~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~ 355 (369)
...+|+| +|.|+|++|||+ .. |.. ++.. +. . ..++||||+++|+|||+||+|++++|+.
T Consensus 221 ~~~vP~~-~g~~~~~~as~~~~~------~~~-~~~~-~~-~-~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 280 (281)
T 1mjf_A 221 SFPVIGY-ASPWAFLVGVKGDID------FTK-IDRE-RA-K-KLQLEYYDPLMHETLFQMPKYIRETLQR 280 (281)
T ss_dssp EECCTTS-SSSEEEEEEEESSCC------TTC-CCHH-HH-H-TSCCSSCCGGGGGGGGCCCHHHHHHHC-
T ss_pred EEecCCC-CceEEEEEeeCCCCC------ccc-cchh-hh-h-ccCCcEECHHHHHHHhcCcHHHHHHHhh
Confidence 8889999 889999999997 22 221 1111 11 1 1478999999999999999999999864
No 13
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=1e-48 Score=369.59 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=219.1
Q ss_pred cccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHH
Q 017607 78 PGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVL 157 (369)
Q Consensus 78 ~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~ 157 (369)
|+.++++++++++++++|+||+|.|+++..+|++|++||. |+++.|++.||||++|++++.++++++||+||||+|.++
T Consensus 9 ~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~~ 87 (262)
T 2cmg_A 9 PYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELA 87 (262)
T ss_dssp TTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEESSCCHHHH
T ss_pred CCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEEeCCcCHHH
Confidence 7899999999999999999999999999999999999999 999999999999999999988889999999999999999
Q ss_pred HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccH
Q 017607 158 REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEK 237 (369)
Q Consensus 158 ~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ 237 (369)
++++++ + .+|++||+|+.+++.|+++++....++++++++++.+|+.+++ ++||+||+|+++|.
T Consensus 88 ~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~Ii~d~~dp~--------- 151 (262)
T 2cmg_A 88 HQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLIFCLQEPDI--------- 151 (262)
T ss_dssp HHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEEEESSCCCH---------
T ss_pred HHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEEEECCCChH---------
Confidence 999999 6 8999999999999999999876432345789999999999875 57999999976642
Q ss_pred HHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCCcEEEEEeecCCCCC-CCCCCCC
Q 017607 238 PFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHV-DFVNPIN 316 (369)
Q Consensus 238 ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask~~~~~-~~~~p~~ 316 (369)
.||+.++++|+|||+++++.++++.....+..+.++++++|+ .+.++...+|+ +|.|+|++|||+..|. ++.
T Consensus 152 ~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~~~~~~~~vP~--~g~~~~~~as~~~~p~~~~~---- 224 (262)
T 2cmg_A 152 HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFS-VAMPFVAPLRI--LSNKGYIYASFKTHPLKDLM---- 224 (262)
T ss_dssp HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCS-EEEEECCTTCT--TCCEEEEEEESSCCTTTTCC----
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCC-ceEEEEEccCC--CcccEEEEeeCCCCchhhcC----
Confidence 289999999999999999988888777788999999999999 67777788898 7899999999985544 221
Q ss_pred chhhhcccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcc
Q 017607 317 PIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 356 (369)
Q Consensus 317 ~~~~~~~~~~~~~~~~yy~~~~h~a~f~lP~~~~~~l~~~ 356 (369)
.+..+ .. .++||||+++|+|||+||+|++++|++.
T Consensus 225 -~~~~~---~~-~~~~~y~~~~h~~~f~lp~~~~~~l~~~ 259 (262)
T 2cmg_A 225 -TPKIE---AL-TSVRYYNEDIHRAAFALPKNLQEVFKDN 259 (262)
T ss_dssp -HHHHT---TC-CSCSSCCHHHHHHTTCCCHHHHHHGGGT
T ss_pred -HhHhh---cc-CCCcEECHHHHHHHcCCCHHHHHHHHHH
Confidence 01111 11 5789999999999999999999999854
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=3.9e-46 Score=365.22 Aligned_cols=225 Identities=24% Similarity=0.389 Sum_probs=194.9
Q ss_pred cccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHH
Q 017607 78 PGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVL 157 (369)
Q Consensus 78 ~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~ 157 (369)
+|...+|+++++||+++|+||+|.|+++..||++|+|||.+|++++| +.|||||+|++++.+ +|++||+||+|+|+++
T Consensus 143 dg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~-~pkrVLIIGgGdG~~~ 220 (381)
T 3c6k_A 143 DGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDY-TGKDVLILGGGDGGIL 220 (381)
T ss_dssp TCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCC-TTCEEEEEECTTCHHH
T ss_pred CCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhcC-CCCeEEEECCCcHHHH
Confidence 48999999999999999999999999999999999999999999999 679999999998766 5899999999999999
Q ss_pred HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCC---CCCEEEEEcchHHHHhhC--CCCCccEEEEcCCCC----
Q 017607 158 REISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFE---DPRVRLHIGDAVEFLRQV--PRGKYDAIIVDSSDP---- 227 (369)
Q Consensus 158 ~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~---~~rv~v~~~Da~~~l~~~--~~~~fDvIi~D~~~p---- 227 (369)
+++++|++ ++|++||||++|+++|+++|+..+. .++ ++|++++++||++|+++. ..++||+||+|++++
T Consensus 221 revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~ 299 (381)
T 3c6k_A 221 CEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST 299 (381)
T ss_dssp HHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC
T ss_pred HHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccC
Confidence 99999975 8999999999999999999987654 344 356999999999999743 236899999998764
Q ss_pred --CCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeE--EEEEEeeccCCcEEEEEee
Q 017607 228 --VGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY--AWASVPTYPSGIIGFLICS 303 (369)
Q Consensus 228 --~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~--~~~~vP~~p~g~w~f~~as 303 (369)
.+++..||+++||+.++++|+|||++++|++++|.. +.++.+.++++++|+ .+.+ +++.||+|| |.|+|++||
T Consensus 300 ~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF~-~v~~~~~~~~VPSy~-~~W~F~~aS 376 (381)
T 3c6k_A 300 SPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLYC-PVEFSKEIVCVPSYL-ELWVFYTVW 376 (381)
T ss_dssp C----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSSS-CEEEEEEEECCGGGS-SCEEEEEEE
T ss_pred cccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhCC-cceEeeEEEEecCCC-CceeeeEEE
Confidence 344567999999999999999999999999998874 567889999999998 5654 457899999 579999999
Q ss_pred cCCCC
Q 017607 304 TEGPH 308 (369)
Q Consensus 304 k~~~~ 308 (369)
|+.+|
T Consensus 377 K~~~P 381 (381)
T 3c6k_A 377 KKAKP 381 (381)
T ss_dssp ECCC-
T ss_pred CCCCC
Confidence 98543
No 15
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=1.4e-41 Score=331.75 Aligned_cols=227 Identities=27% Similarity=0.464 Sum_probs=194.7
Q ss_pred CCCCc---ccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEe
Q 017607 74 NPMWP---GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVG 150 (369)
Q Consensus 74 ~~~~~---~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG 150 (369)
+++|| +++.++++++++++++|+||+|.|+++..||++|++||.+|++++| +.|||||+|+++ .|++|++||+||
T Consensus 119 ~~~~~~~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IG 196 (364)
T 2qfm_A 119 DRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILG 196 (364)
T ss_dssp CCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEE
T ss_pred CceeEccCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEE
Confidence 45677 5789999999999999999999999999999999999999999999 999999999988 688999999999
Q ss_pred CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCCCC---CEEEEEcchHHHHhhC--CCCCccEEEEcC
Q 017607 151 GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDP---RVRLHIGDAVEFLRQV--PRGKYDAIIVDS 224 (369)
Q Consensus 151 ~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~---rv~v~~~Da~~~l~~~--~~~~fDvIi~D~ 224 (369)
||+|+++++++++++ .+|++||||+.+++.||++|+..+. .++++ +++++++|+++|++.. ..++||+||+|+
T Consensus 197 gG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~ 275 (364)
T 2qfm_A 197 GGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDL 275 (364)
T ss_dssp CTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECC
Confidence 999999999999975 8999999999999999999987643 35554 8999999999999753 246899999999
Q ss_pred CC-CCCC-ccccccHHHHHHH----HHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeE--EEEEEeeccCCc
Q 017607 225 SD-PVGP-AQELVEKPFFDTI----AKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY--AWASVPTYPSGI 296 (369)
Q Consensus 225 ~~-p~~~-~~~L~~~ef~~~~----~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~--~~~~vP~~p~g~ 296 (369)
++ |.+. +..+++.+||+.+ +++|+|||++++|+++++. .+....+.+.+++.|+ .|.+ +.+.||+|++ .
T Consensus 276 ~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F~-~v~~~~~~~~vPsy~~-~ 352 (364)
T 2qfm_A 276 TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLYC-PVEFSKEIVCVPSYLE-L 352 (364)
T ss_dssp CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSSS-CEEEEEEEECCGGGSS-C
T ss_pred CCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhCC-ceEEeeEeeecCCchh-h
Confidence 98 7653 3358999999998 9999999999999988776 3444444445888999 7777 7899999996 9
Q ss_pred EEEEEeecCC
Q 017607 297 IGFLICSTEG 306 (369)
Q Consensus 297 w~f~~ask~~ 306 (369)
|+|..|+|+.
T Consensus 353 w~f~~~~k~~ 362 (364)
T 2qfm_A 353 WVFYTVWKKA 362 (364)
T ss_dssp EEEEEEEECC
T ss_pred eEeEEeeccc
Confidence 9999999973
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=2.3e-32 Score=263.61 Aligned_cols=239 Identities=16% Similarity=0.152 Sum_probs=187.2
Q ss_pred CCCceEEEEEec--CceeEEEEcCeEeecc------cchhHHHHHHHhcccc---CCCCCC--EEEEEeCcccHHHHHHH
Q 017607 95 SEYQEVLVFESL--AYGKVLVLDGIVQLTE------KDECAYQEMIAHLPLC---SIPSPK--TVLVVGGGDGGVLREIS 161 (369)
Q Consensus 95 s~~q~I~v~~~~--~~G~~l~lDg~~q~~~------~de~~Y~e~l~~~~l~---~~~~p~--~VLdIG~G~G~~~~~l~ 161 (369)
..|..+++.... .+|++|++||.+|++. .+++.||++|+|++++ .|++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 445558888765 3899999999999974 5899999999999987 577776 99999999999999999
Q ss_pred hcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHH
Q 017607 162 RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFD 241 (369)
Q Consensus 162 k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~ 241 (369)
++.+..+|++||||+.+++.||++|+.. .+++++++++|++++++..++++||+||+|++++.+.+..+++.+||+
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~ 184 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFE 184 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHH
Confidence 9655569999999999999999998753 368999999999999976555789999999999888888899999999
Q ss_pred HHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCCcEEE--EEeecCCCCCCCCCCCCchh
Q 017607 242 TIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGF--LICSTEGPHVDFVNPINPIE 319 (369)
Q Consensus 242 ~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f--~~ask~~~~~~~~~p~~~~~ 319 (369)
.++++|+|||+|+++..+. .....++.+.++++++|+ .+..+...+|.+. ..||. ++||+...+..-. ...+
T Consensus 185 ~~~r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g-~~~gN~Vl~As~~plp~~~~---~~~~ 258 (317)
T 3gjy_A 185 HCHRGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVFE-HVAVIADPPMLKG-RRYGNIILMGSDTEFFSSNS---TEAS 258 (317)
T ss_dssp HHHHHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHCS-EEEEEECHHHHTT-SSCEEEEEEEESSCCCCTTS---HHHH
T ss_pred HHHHhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHCC-ceEEEEecCCCCC-CcCceEEEEEECCCCCcccc---cchH
Confidence 9999999999999987653 234578899999999999 4554433445452 34555 7888763222000 0112
Q ss_pred hhc-ccccCCCCCeeeCHHHHHHHh
Q 017607 320 KLE-GADKHKRELRFYNSEIHSAAF 343 (369)
Q Consensus 320 ~~~-~~~~~~~~~~yy~~~~h~a~f 343 (369)
.+. +......+.+|++++.+++..
T Consensus 259 ~l~r~~~~~~~p~~~~~~~~l~~~~ 283 (317)
T 3gjy_A 259 AITRELLGGGVPAQYKDESWVRKFA 283 (317)
T ss_dssp HHHHHHTSSSSCCEEECHHHHHHHT
T ss_pred HHHHHHcCCCCCeEEECHHHHHHHh
Confidence 222 233456689999999876643
No 17
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=6e-15 Score=135.96 Aligned_cols=125 Identities=20% Similarity=0.190 Sum_probs=96.7
Q ss_pred cchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE
Q 017607 123 KDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI 202 (369)
Q Consensus 123 ~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~ 202 (369)
..+..|.+.++... .+++.+|||||||+|.++..++++.+ .+|++||+++.+++.|++++... ..+++++.
T Consensus 44 ~we~~~m~~~a~~~---~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~ 114 (236)
T 3orh_A 44 RWETPYMHALAAAA---SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLK 114 (236)
T ss_dssp GGGHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEE
T ss_pred HHHHHHHHHHHHhh---ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEe
Confidence 34445555555432 24678999999999999999998864 68999999999999999987654 46799999
Q ss_pred cchHHHHhhCCCCCccEEEEcCCCCCCCcccc-ccHHHHHHHHHhccCCceEEec
Q 017607 203 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQEL-VEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 203 ~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L-~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|+...+...++++||.|+.|.........+. ....++++++|+|||||+|++.
T Consensus 115 ~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 115 GLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 99998877777789999998865433222222 2356889999999999999864
No 18
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.59 E-value=3.7e-14 Score=128.37 Aligned_cols=151 Identities=17% Similarity=0.229 Sum_probs=104.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC---CCCc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP---RGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~---~~~f 217 (369)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+.+.... .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL---NDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 578999999999999999998755 67999999999999999999876532 3579999999988765421 1579
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccch--------hhhHHHHHHHHHHHHCCCCeeEEEEEE
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWASV 289 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~--------~~~~~~~i~~~l~~~F~~~v~~~~~~v 289 (369)
|+|++|...+ ....+++.+.+.|+|||++++... .|. .......+.+.++.+.. ...+....+
T Consensus 135 D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 205 (223)
T 3duw_A 135 DFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV-VREGEVIDNTSNDPRVQGIRRFYELIAA-EPRVSATAL 205 (223)
T ss_dssp SEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC-SGGGGGGCTTCCCHHHHHHHHHHHHHHH-CTTEEEEEE
T ss_pred CEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC-CcCCcccCccccchHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 9999886521 235789999999999999986421 111 11112222222222222 223445566
Q ss_pred ee-ccCCcEEEEEeec
Q 017607 290 PT-YPSGIIGFLICST 304 (369)
Q Consensus 290 P~-~p~g~w~f~~ask 304 (369)
|. ...|.=||.++.+
T Consensus 206 p~~~~~~~dG~~~~~~ 221 (223)
T 3duw_A 206 QTVGSKGYDGFIMAVV 221 (223)
T ss_dssp EEEETTEEEEEEEEEE
T ss_pred eccCCCCCCeeEEEEE
Confidence 76 2234468888765
No 19
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=3.3e-14 Score=131.86 Aligned_cols=105 Identities=22% Similarity=0.275 Sum_probs=87.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDv 219 (369)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+. .++++++.+|+.+++.... .++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV---DQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 578999999999999999998754 67999999999999999999876532 3589999999999876542 248999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|++|...+ ....+++.+.+.|+|||++++.
T Consensus 140 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 140 IFIDADKP-------NNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp EEECSCGG-------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEECCchH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 99976311 1356899999999999999864
No 20
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=1.8e-14 Score=132.84 Aligned_cols=150 Identities=16% Similarity=0.207 Sum_probs=107.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-----CC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-----PR 214 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-----~~ 214 (369)
.++++|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++...+ + .++++++.+|+.+++... ..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--V-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 3678999999999999999998743 6899999999999999999987652 2 358999999999887543 14
Q ss_pred CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc----ccchh----hh----HHHHHHHHHHHHCCCCe
Q 017607 215 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE----SMWLH----TH----LIEDMISICRETFKGSV 282 (369)
Q Consensus 215 ~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~----s~~~~----~~----~~~~i~~~l~~~F~~~v 282 (369)
++||+|++|.... ...++++.+.+.|+|||++++... .++.. .. ..+.+.+..+.++. ..
T Consensus 146 ~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~-~~ 217 (237)
T 3c3y_A 146 GSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAA-DP 217 (237)
T ss_dssp TCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHH-CT
T ss_pred CCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhc-CC
Confidence 6899999985321 246799999999999999987431 11111 01 12333344444444 34
Q ss_pred eEEEEEEeeccCCcEEEEEeecC
Q 017607 283 HYAWASVPTYPSGIIGFLICSTE 305 (369)
Q Consensus 283 ~~~~~~vP~~p~g~w~f~~ask~ 305 (369)
.+....+|.+ -|+.++.|.
T Consensus 218 ~~~~~~lp~~----dG~~~~~~~ 236 (237)
T 3c3y_A 218 RIEIVHLPLG----DGITFCRRL 236 (237)
T ss_dssp TEEEEEECST----TCEEEEEEC
T ss_pred CeEEEEEEeC----CceEEEEEc
Confidence 5666778865 246776653
No 21
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.56 E-value=3.5e-14 Score=129.55 Aligned_cols=114 Identities=21% Similarity=0.265 Sum_probs=94.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvI 220 (369)
...+|||||||+|.++..+++..+..+|++||+++.+++.|+++....+ -.+++++.+|+.+++.. .++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCCChheE
Confidence 4568999999999999999988777899999999999999999876542 24799999999998653 456799999
Q ss_pred EEcCCCCCCCc----cccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~----~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++..++|+... ..+...++++.++++|+|||++++.+..
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99888887542 2345568999999999999999986654
No 22
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.55 E-value=2.8e-14 Score=132.56 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=87.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-----CC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-----PR 214 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-----~~ 214 (369)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+++... ..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV---DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEECCHHHHHHHHHhccCCC
Confidence 3578999999999999999998744 67999999999999999999876522 358999999999887543 13
Q ss_pred CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 215 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 215 ~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++||+|++|.... ....+++.+.++|+|||++++.
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEe
Confidence 6899999986421 2457899999999999999864
No 23
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=6.3e-14 Score=123.89 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=87.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||+|||+|.++.++++.. ..+|+++|+|+.+++.|++++...+. ++++++.+|+.+++...++++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGL----SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTC----SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCC----CceEEEEccHHHHHhhccCCCccEE
Confidence 356799999999999999888763 56899999999999999999876522 5899999999998765545789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHH--hccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~--~LkpgGilv~~~~ 258 (369)
++|.+.... . -...++++.+.+ +|+|||+++++..
T Consensus 118 ~~~~p~~~~--~-~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVD--S-ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSC--H-HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcc--h-hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 987542221 0 123568889998 9999999998654
No 24
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=6.6e-14 Score=128.33 Aligned_cols=103 Identities=20% Similarity=0.322 Sum_probs=87.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh-hCCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~~fDvI 220 (369)
++.+|||||||+|..+..+++..+..+|++||+++.+++.|++++...+. .++++++.+|+.+++. .. +++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~-~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF---ENQVRIIEGNALEQFENVN-DKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCHHHHT-TSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhhc-cCCccEE
Confidence 57899999999999999999976678999999999999999999876532 3589999999998776 44 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
++|..... ...+++.+.+.|+|||++++
T Consensus 147 ~~~~~~~~-------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 147 FIDAAKAQ-------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EEETTSSS-------HHHHHHHHGGGEEEEEEEEE
T ss_pred EEcCcHHH-------HHHHHHHHHHhcCCCeEEEE
Confidence 98864211 35689999999999999987
No 25
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.54 E-value=7.2e-14 Score=126.06 Aligned_cols=114 Identities=20% Similarity=0.294 Sum_probs=92.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
+..+|||||||+|.++..+++..+..++++||+++.+++.|++++...+ -++++++.+|+.++....++++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 4678999999999999999998777899999999999999999886652 158999999998743324456899999
Q ss_pred EcCCCCCCC----ccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSSDPVGP----AQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~~----~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++.++|+.. ...+....+++.+.++|+|||++++.+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 988776532 12234578999999999999999986643
No 26
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=9.6e-14 Score=125.82 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=93.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++...+ -++++++.+|+.++....++++||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 4568999999999999999998777899999999999999999876542 257999999998854334457899999
Q ss_pred EcCCCCCCCc----cccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSSDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~~~----~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+..++|+... ..+....+++.+.++|+|||.+++.+.+
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9887776432 2345678999999999999999986644
No 27
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=3.5e-14 Score=127.61 Aligned_cols=146 Identities=16% Similarity=0.219 Sum_probs=103.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+++... ++ ||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~-~~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL---IDRVELQVGDPLGIAAGQ-RD-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG---GGGEEEEESCHHHHHTTC-CS-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CceEEEEEecHHHHhccC-CC-CCEE
Confidence 567999999999999999998754 67999999999999999999876522 357999999999887654 35 9999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccch-------hhhHHHHHHHHHHHHCCCCeeEEEEEEeecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL-------HTHLIEDMISICRETFKGSVHYAWASVPTYP 293 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~-------~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p 293 (369)
++|... .....+++.+.+.|+|||++++... .|. .......+.+.+..++. ...+....+|..
T Consensus 131 ~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~p~~- 200 (210)
T 3c3p_A 131 FMDCDV-------FNGADVLERMNRCLAKNALLIAVNA-LRRGSVAESHEDPETAALREFNHHLSR-RRDFFTTIVPVG- 200 (210)
T ss_dssp EEETTT-------SCHHHHHHHHGGGEEEEEEEEEESS-SSCC------------CCCHHHHHHTT-CTTEEEEEECST-
T ss_pred EEcCCh-------hhhHHHHHHHHHhcCCCeEEEEECc-cccCcccCcccchHHHHHHHHHHHHhh-CCCeEEEEEecC-
Confidence 998532 1246789999999999999987421 121 11111222333444454 345555566654
Q ss_pred CCcEEEEEeecC
Q 017607 294 SGIIGFLICSTE 305 (369)
Q Consensus 294 ~g~w~f~~ask~ 305 (369)
+||.++.|.
T Consensus 201 ---~G~~~~~~~ 209 (210)
T 3c3p_A 201 ---NGVLLGYRL 209 (210)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CceEEEEeC
Confidence 467777664
No 28
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=7.2e-14 Score=127.71 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=86.5
Q ss_pred EEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEc
Q 017607 145 TVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVD 223 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 223 (369)
+|||||||+|..+..+++. ++..+|++||+|+.+++.|++++...+ +.+++++++.+|+.+++....+++||+|++|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 9999999999999999986 446799999999999999999987653 2325899999999999876545789999998
Q ss_pred CCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 224 SSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 224 ~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
.... ...++++.+.+.|+|||++++.
T Consensus 137 ~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred CcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 6421 1346899999999999999974
No 29
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.52 E-value=4.1e-14 Score=131.04 Aligned_cols=105 Identities=19% Similarity=0.314 Sum_probs=86.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC----CCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV----PRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~----~~~~ 216 (369)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+. .++++++.+|+.+++... ..++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ---EHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC---TTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 578999999999999999998643 67999999999999999999876532 358999999999887643 1368
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
||+|++|... -....+++.+.+.|+|||++++.
T Consensus 137 fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 137 FDFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 9999998641 12356899999999999999873
No 30
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.50 E-value=1e-13 Score=130.06 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=83.9
Q ss_pred CCCCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCc
Q 017607 140 IPSPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217 (369)
Q Consensus 140 ~~~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~f 217 (369)
.++..+|||||||+|..+..+++.. +..+|++||+++.|++.||+++..... ..+++++.+|+.++ +.+.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~---~~~v~~~~~D~~~~----~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---PTPVDVIEGDIRDI----AIENA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEESCTTTC----CCCSE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc---CceEEEeecccccc----ccccc
Confidence 4566799999999999999999863 356899999999999999998765422 45899999998764 33579
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+|++.......+.. -...++++++++|+|||+|++.
T Consensus 141 d~v~~~~~l~~~~~~--~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 141 SMVVLNFTLQFLEPS--ERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceeeeeeeecCch--hHhHHHHHHHHHcCCCcEEEEE
Confidence 999976543322211 1246899999999999999863
No 31
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.50 E-value=3.2e-13 Score=122.24 Aligned_cols=105 Identities=19% Similarity=0.339 Sum_probs=86.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC----CC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----GK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~----~~ 216 (369)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+++..... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL---SDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---CCceEEEeCCHHHHHHHhhhccCCCC
Confidence 567999999999999999998744 67999999999999999999876532 35799999999888754321 68
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
||+|++|... .....+++.+.+.|+|||++++.
T Consensus 141 fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 141 YDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 9999987641 12356899999999999999863
No 32
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=2.6e-13 Score=126.79 Aligned_cols=131 Identities=14% Similarity=0.262 Sum_probs=94.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh---hcCCCCCCCEEEEEcchHHHHh-----hC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE---LAVGFEDPRVRLHIGDAVEFLR-----QV 212 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~---~~~~~~~~rv~v~~~Da~~~l~-----~~ 212 (369)
..+.+|||||||+|.++..+++..+..+|++||+++.+++.|++++.. .+ + ..+++++.+|+.++.. ..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l-~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA--F-SARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT--T-GGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC--C-cceEEEEeCCHHHHhhhhhhhcc
Confidence 356799999999999999999887678999999999999999999875 32 1 2479999999988743 12
Q ss_pred CCCCccEEEEcCCCCCCC--------------ccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHC
Q 017607 213 PRGKYDAIIVDSSDPVGP--------------AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETF 278 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~--------------~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F 278 (369)
++++||+|+++.+..... ........+++.+.+.|+|||.+++.... ....++.+.+++.|
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----~~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP-----QSVAEIIAACGSRF 186 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG-----GGHHHHHHHHTTTE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH-----HHHHHHHHHHHhcC
Confidence 356899999874321110 00112467899999999999999874322 23445666665545
Q ss_pred C
Q 017607 279 K 279 (369)
Q Consensus 279 ~ 279 (369)
.
T Consensus 187 ~ 187 (260)
T 2ozv_A 187 G 187 (260)
T ss_dssp E
T ss_pred C
Confidence 4
No 33
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.48 E-value=2.3e-12 Score=112.67 Aligned_cols=134 Identities=15% Similarity=0.266 Sum_probs=98.6
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
..++..+. ..++.+|||||||+|..+..+++. ..+++++|+++.+++.+++++...+ ..+.+++++.+|+.+.
T Consensus 42 ~~l~~~~~---~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 42 KILVENVV---VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNN--LDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHCC---CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTT--CTTSCEEEEECSTTTT
T ss_pred HHHHHHcc---cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECchhcc
Confidence 44444443 235679999999999999999988 4699999999999999999886542 2222599999998875
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
+. +++||+|+++....... -....+++.+.++|+|||.+++...+. .....+.+.+++.|.
T Consensus 115 ~~---~~~~D~v~~~~~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 115 VK---DRKYNKIITNPPIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFG 175 (194)
T ss_dssp CT---TSCEEEEEECCCSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHS
T ss_pred cc---cCCceEEEECCCcccch---hHHHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhc
Confidence 43 46899999865322111 123578999999999999998765433 234456677777787
No 34
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=4.2e-13 Score=121.77 Aligned_cols=106 Identities=20% Similarity=0.359 Sum_probs=86.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC----C
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----G 215 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~----~ 215 (369)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.+..... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA---EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 3578999999999999999998743 67999999999999999999876522 35899999999887654311 5
Q ss_pred CccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 216 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+||+|++|... .....+++.+.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADK-------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 89999987641 11357899999999999999873
No 35
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=125.41 Aligned_cols=118 Identities=20% Similarity=0.207 Sum_probs=89.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhc--CCCCCCCEEEEEcchHHHHhh-CCCCCcc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA--VGFEDPRVRLHIGDAVEFLRQ-VPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~--~~~~~~rv~v~~~Da~~~l~~-~~~~~fD 218 (369)
+..+|||||||+|.++..+++..+...|++||+++.+++.|++++.... ......+++++.+|+.+++.. .++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4568999999999999999998777899999999999999998764321 001235799999999875542 3457899
Q ss_pred EEEEcCCCCCCC----ccccccHHHHHHHHHhccCCceEEecccc
Q 017607 219 AIIVDSSDPVGP----AQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 219 vIi~D~~~p~~~----~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
.|++..++|+.. ...+....+++.+.++|+|||.|++.++.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 999888777632 22344568999999999999999987654
No 36
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=2e-13 Score=124.93 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=84.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|..+..+++.. ..+|+++|+++.+++.|+++.... ..+++++.+|+.+.+...++++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 346799999999999999998764 358999999999999999987653 36799999999987655556789999
Q ss_pred EEcCCCCCCCcccc-ccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQEL-VEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L-~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++|......+.... ....+++.++++|||||++++.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 98643321111111 1235789999999999999864
No 37
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=8.3e-15 Score=137.71 Aligned_cols=230 Identities=12% Similarity=0.130 Sum_probs=145.8
Q ss_pred ccccceeccccCCCccccccccCCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHH-H
Q 017607 51 VVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAY-Q 129 (369)
Q Consensus 51 ~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y-~ 129 (369)
...+|+.++..+.++..+..+...++.+.+...+..-........|.|+|.-.... +|..+.++..+.+..++.... .
T Consensus 22 ~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~g~~~f-~~~~~~~~~~~~ipr~~te~l~~ 100 (276)
T 2b3t_A 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREF-WSLPLFVSPATLIPRPDTECLVE 100 (276)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTTTCBCCHHHHHHHHHHHHHHHTTCCHHHHSCEEEE-TTEEEECCTTSCCCCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCChhHeeeeeEE-CCceEEeCCCCcccCchHHHHHH
Confidence 34567888777777777777777776655443332100001134456666554433 677777776665655552222 2
Q ss_pred HHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH
Q 017607 130 EMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 209 (369)
Q Consensus 130 e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l 209 (369)
.++..++ .++.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++...+. ++++++.+|+.+.+
T Consensus 101 ~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~----~~v~~~~~d~~~~~ 172 (276)
T 2b3t_A 101 QALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI----KNIHILQSDWFSAL 172 (276)
T ss_dssp HHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC----CSEEEECCSTTGGG
T ss_pred HHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEcchhhhc
Confidence 2333332 356799999999999999999876678999999999999999999876522 47999999998764
Q ss_pred hhCCCCCccEEEEcCCCCCC-------------Cccc--------cccHHHHHHHHHhccCCceEEecccccchhhhHHH
Q 017607 210 RQVPRGKYDAIIVDSSDPVG-------------PAQE--------LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIE 268 (369)
Q Consensus 210 ~~~~~~~fDvIi~D~~~p~~-------------~~~~--------L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~ 268 (369)
. .++||+|+++.+.... |... -....+++.+.+.|+|||++++... +....
T Consensus 173 ~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~--- 244 (276)
T 2b3t_A 173 A---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--WQQGE--- 244 (276)
T ss_dssp T---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC--SSCHH---
T ss_pred c---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC--chHHH---
Confidence 2 4689999987432111 0001 1236788999999999999987542 22222
Q ss_pred HHHHHHHHH-CCCCeeEEEEEEeeccCCcEEEEEee
Q 017607 269 DMISICRET-FKGSVHYAWASVPTYPSGIIGFLICS 303 (369)
Q Consensus 269 ~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~f~~as 303 (369)
.+.+.+++. |. .+.. .+.+ .|.-.|+++.
T Consensus 245 ~~~~~l~~~Gf~-~v~~----~~d~-~g~~r~~~~~ 274 (276)
T 2b3t_A 245 AVRQAFILAGYH-DVET----CRDY-GDNERVTLGR 274 (276)
T ss_dssp HHHHHHHHTTCT-TCCE----EECT-TSSEEEEEEE
T ss_pred HHHHHHHHCCCc-EEEE----EecC-CCCCcEEEEE
Confidence 333334443 65 3332 2333 3566666654
No 38
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=1e-12 Score=120.51 Aligned_cols=147 Identities=19% Similarity=0.312 Sum_probs=103.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC--C--CC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP--R--GK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~--~--~~ 216 (369)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+++...+ + ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV---AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 567999999999999999998754 57999999999999999999876522 3579999999988765432 2 68
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccch--------hhhHHHHHHHHHHHHCCCCeeEEEEE
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWAS 288 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~--------~~~~~~~i~~~l~~~F~~~v~~~~~~ 288 (369)
||+|++|... -....+++.+.+.|+|||++++... .|. .......+.+....+.. ...+....
T Consensus 149 fD~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~ 219 (232)
T 3cbg_A 149 FDLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVIDNV-LWHGKVTEVDPQEAQTQVLQQFNRDLAQ-DERVRISV 219 (232)
T ss_dssp EEEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEECT-TGGGGGGCSSCCSHHHHHHHHHHHHHTT-CTTEEEEE
T ss_pred cCEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEeCC-CcCCccCCcccCChHHHHHHHHHHHHhh-CCCeEEEE
Confidence 9999988641 1235789999999999999987421 121 11223334344444444 34555566
Q ss_pred EeeccCCcEEEEEeec
Q 017607 289 VPTYPSGIIGFLICST 304 (369)
Q Consensus 289 vP~~p~g~w~f~~ask 304 (369)
+|... ||.++.|
T Consensus 220 lp~~d----G~~~~~~ 231 (232)
T 3cbg_A 220 IPLGD----GMTLALK 231 (232)
T ss_dssp ECSBT----CEEEEEE
T ss_pred EEcCC----eEEEEEe
Confidence 77642 3666554
No 39
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.46 E-value=3.2e-13 Score=122.51 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=84.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC----CC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----GK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~----~~ 216 (369)
++++|||||||+|..+..+++.. +..+|++||+++.+++.|++++...+. .++++++.+|+.+++..... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL---QDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCceEEEECCHHHHHHHHHHhcCCCc
Confidence 57899999999999999999863 367999999999999999999876532 35799999999988765432 58
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||+|++|....... -..++++.+ +.|+|||++++..
T Consensus 135 fD~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeC
Confidence 99999886432111 122466666 9999999999753
No 40
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=9.2e-14 Score=130.08 Aligned_cols=99 Identities=19% Similarity=0.287 Sum_probs=80.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+...+|||||||+|..+..++++. .+|++||+++.+++.|++ .++++++++|+.+. ..++++||+|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~--~~~~~sfD~v 103 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT--GLPPASVDVA 103 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC--CCCSSCEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh--cccCCcccEE
Confidence 456799999999999999999885 589999999999987654 36899999998764 3456799999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++...-++.. ...++++++|+|||||+|++...
T Consensus 104 ~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 104 IAAQAMHWFD-----LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EECSCCTTCC-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeeehhHhh-----HHHHHHHHHHHcCCCCEEEEEEC
Confidence 9755443332 35699999999999999987543
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=1.6e-12 Score=114.09 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=81.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++..+|||||||+|..+..+++. ..+|+++|+|+.+++.|++++...+. ++++++.+|..... ...+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~~~~~l~-~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI----ENTELILDGHENLD-HYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC----CCEEEEESCGGGGG-GTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeCcHHHHH-hhccCCcCEE
Confidence 45679999999999999999988 47999999999999999999876522 57999997776542 2235689999
Q ss_pred EEcC-CCCCCCc----cccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDS-SDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~-~~p~~~~----~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+++. ..+.... .......+++.+.+.|+|||.+++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 9873 2121100 00113467899999999999988643
No 42
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=1.4e-12 Score=121.21 Aligned_cols=127 Identities=15% Similarity=0.168 Sum_probs=93.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|.++..+++..+. +|++||+++.+++.|++++...+. ..+++++.+|+.++....+.++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~---~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL---EDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC---TTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC---cccEEEEECcHHHhhhhhccCCccEEE
Confidence 5679999999999999999988643 999999999999999999876532 347999999999886544457899999
Q ss_pred EcCCCCCC----Ccc------------ccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 222 VDSSDPVG----PAQ------------ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 222 ~D~~~p~~----~~~------------~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
++.+.... ... .....++++.+.+.|+|||.+++.. ......++...+++.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-----RPERLLDIIDIMRKY 191 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-----CTTTHHHHHHHHHHT
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-----cHHHHHHHHHHHHHC
Confidence 87542111 000 0112469999999999999998732 123345555666553
No 43
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=9.3e-13 Score=117.60 Aligned_cols=120 Identities=16% Similarity=0.165 Sum_probs=93.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+ -++++++.+|+.+.+... ++||+|
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~--~~~D~i 112 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEGLDDL--PDPDRV 112 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTTCTTS--CCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhhhhcC--CCCCEE
Confidence 45679999999999999999998777899999999999999999887652 257999999987765432 579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
+++.... ....+++.+.+.|+|||.+++.... ......+.+.+++.
T Consensus 113 ~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 113 FIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT----LDTLTKAVEFLEDH 158 (204)
T ss_dssp EESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB----HHHHHHHHHHHHHT
T ss_pred EECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc----cccHHHHHHHHHHC
Confidence 9876543 2357999999999999999975432 12344555555544
No 44
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.44 E-value=5.5e-13 Score=122.41 Aligned_cols=148 Identities=18% Similarity=0.278 Sum_probs=102.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--------
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-------- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-------- 212 (369)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..+++++.+|+.+++...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL---ENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEEECCHHHHHHHHHhhccccc
Confidence 567999999999999999998754 57999999999999999999865422 346999999998876532
Q ss_pred -----C-C-CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchh--------hhHHHHHHHHHHHH
Q 017607 213 -----P-R-GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLH--------THLIEDMISICRET 277 (369)
Q Consensus 213 -----~-~-~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~--------~~~~~~i~~~l~~~ 277 (369)
+ + ++||+|+++...+ ....+++.+.+.|+|||++++... .|.. ......+.+....+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 208 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADNV-LWDGSVADLSHQEPSTVGIRKFNELV 208 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECS-SGGGGGGCTTCCCHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEcc-ccCCcccCccccchHHHHHHHHHHHH
Confidence 1 1 6799999875311 134689999999999999987431 1111 11222222222222
Q ss_pred CCCCeeEEEEEEeeccCCcEEEEEeecC
Q 017607 278 FKGSVHYAWASVPTYPSGIIGFLICSTE 305 (369)
Q Consensus 278 F~~~v~~~~~~vP~~p~g~w~f~~ask~ 305 (369)
.. ...+....+|..++ +.++.|.
T Consensus 209 ~~-~~~~~~~~~p~~~g----~~~~~~~ 231 (239)
T 2hnk_A 209 YN-DSLVDVSLVPIADG----VSLVRKR 231 (239)
T ss_dssp HH-CTTEEEEEECSTTC----EEEEEEC
T ss_pred hh-CCCeEEEEEEcCCc----eEeeeeh
Confidence 22 33455677887742 5666664
No 45
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.44 E-value=9.9e-13 Score=124.09 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=103.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
...++|||+|||+|.++..+++.... +|+++|+++.+++.|++++...+. ..+++++.+|+.+++. +++||+|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~---~~~v~~~~~D~~~~~~---~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECCHHHhcc---cCCccEE
Confidence 34679999999999999999998643 899999999999999999876533 3469999999988764 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccccc--chhhhHHHHHHHHHHHHCCCCeeE-EEEEEeeccCCcE
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM--WLHTHLIEDMISICRETFKGSVHY-AWASVPTYPSGII 297 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~--~~~~~~~~~i~~~l~~~F~~~v~~-~~~~vP~~p~g~w 297 (369)
++|.+. . ..++++.+.++|+|||++++...++ .........+.+.+++..- .+.. ....+..|..+.|
T Consensus 197 i~~~p~---~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~-~~~~~~~~~v~~~~p~~~ 267 (278)
T 2frn_A 197 LMGYVV---R-----THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY-DVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp EECCCS---S-----GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC-EEEEEEEEEEEEETTTEE
T ss_pred EECCch---h-----HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC-eeEEeeeEEEEecCCCce
Confidence 987542 1 2458899999999999999865443 2223455666666555422 2221 2222555555666
Q ss_pred EEEE
Q 017607 298 GFLI 301 (369)
Q Consensus 298 ~f~~ 301 (369)
-.++
T Consensus 268 h~~~ 271 (278)
T 2frn_A 268 HVVL 271 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 46
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.43 E-value=1.1e-12 Score=113.78 Aligned_cols=105 Identities=22% Similarity=0.192 Sum_probs=84.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+. ..++ ++.+|+.+.+... .++||+|
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~-~~~~d~~~~~~~~-~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV---SDRI-AVQQGAPRAFDDV-PDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC---TTSE-EEECCTTGGGGGC-CSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC---CCCE-EEecchHhhhhcc-CCCCCEE
Confidence 355699999999999999999987678999999999999999998875522 2378 8889987766542 2689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+++..... ..+++.+.+.|+|||.+++...
T Consensus 99 ~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 99 FIGGGLTA--------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp EECC-TTC--------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred EECCcccH--------HHHHHHHHHhcCCCCEEEEEee
Confidence 97654322 4589999999999999997543
No 47
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.43 E-value=2.8e-12 Score=117.83 Aligned_cols=149 Identities=11% Similarity=0.033 Sum_probs=102.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDv 219 (369)
+.+.+|||||||+|..+..+++..+..+|++||+++.+++.++++....+. ++++++.+|+.++... ...++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL----ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC----SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CCEEEEeccHHHhcccccccCCccE
Confidence 356799999999999999998765667999999999999999998776522 3699999999886421 11368999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CCCCeeEEEEEEeeccCCcEE
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIG 298 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~ 298 (369)
|+++... . ...+++.+.++|+|||++++..+... .+....+.+.+++. |. .+......+|.. .+.+.
T Consensus 145 V~~~~~~---~-----~~~~l~~~~~~LkpgG~l~~~~g~~~--~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~-~~~~~ 212 (240)
T 1xdz_A 145 VTARAVA---R-----LSVLSELCLPLVKKNGLFVALKAASA--EEELNAGKKAITTLGGE-LENIHSFKLPIE-ESDRN 212 (240)
T ss_dssp EEEECCS---C-----HHHHHHHHGGGEEEEEEEEEEECC-C--HHHHHHHHHHHHHTTEE-EEEEEEEECTTT-CCEEE
T ss_pred EEEeccC---C-----HHHHHHHHHHhcCCCCEEEEEeCCCc--hHHHHHHHHHHHHcCCe-EeEEEEEecCCC-CCceE
Confidence 9986631 1 35789999999999999987543221 22344455555543 32 222211222321 35677
Q ss_pred EEEeecC
Q 017607 299 FLICSTE 305 (369)
Q Consensus 299 f~~ask~ 305 (369)
+++..|.
T Consensus 213 l~~~~k~ 219 (240)
T 1xdz_A 213 IMVIRKI 219 (240)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777765
No 48
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.41 E-value=1.2e-12 Score=120.83 Aligned_cols=118 Identities=20% Similarity=0.303 Sum_probs=91.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC----CCCCCEEEEEcchHHHHhh-CCCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG----FEDPRVRLHIGDAVEFLRQ-VPRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~----~~~~rv~v~~~Da~~~l~~-~~~~~ 216 (369)
+..+|||||||+|..+..+++..+..+|++||+++.+++.+++++...... ..-++++++.+|+.+++.. ...++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 456899999999999999999876679999999999999999887543100 0125799999999886653 34578
Q ss_pred ccEEEEcCCCCCCC----ccccccHHHHHHHHHhccCCceEEecccc
Q 017607 217 YDAIIVDSSDPVGP----AQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 217 fDvIi~D~~~p~~~----~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+|.|++..++|+.. ...+...++++.+.++|+|||++++.+..
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999887776532 12334578999999999999999986543
No 49
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.41 E-value=2.5e-13 Score=118.83 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=83.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~fDv 219 (369)
.+.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++++...+. .++++++.+|+.+++... ..++||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE---PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC---CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 56799999999999999988853 56999999999999999998876521 257999999999876432 1468999
Q ss_pred EEEcCCCCCCCccccccHHHHHHH--HHhccCCceEEecccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTI--AKALRPGGVLCNMAES 259 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~--~~~LkpgGilv~~~~s 259 (369)
|+++.+. .. ....++++.+ .++|+|||++++...+
T Consensus 120 i~~~~~~--~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 120 VLLDPPY--AK---QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEECCCG--GG---CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEECCCC--Cc---hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 9987541 11 1134566777 7889999999876543
No 50
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.41 E-value=9.7e-13 Score=125.35 Aligned_cols=103 Identities=16% Similarity=0.222 Sum_probs=82.1
Q ss_pred CCCCCCEEEEEeCcccHHH-HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCc
Q 017607 139 SIPSPKTVLVVGGGDGGVL-REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217 (369)
Q Consensus 139 ~~~~p~~VLdIG~G~G~~~-~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~f 217 (369)
..+.+.+|||||||+|..+ ..+++.. ..+|+++|+|+++++.||+++...+ + .+++++.+|+.++- +++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~g--l--~~v~~v~gDa~~l~----d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLG--V--DGVNVITGDETVID----GLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHT--C--CSEEEEESCGGGGG----GCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcC--C--CCeEEEECchhhCC----CCCc
Confidence 3467889999999998665 4455543 5799999999999999999987652 2 58999999998852 4689
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+++... + -..++++.+.++|+|||++++..
T Consensus 190 DvV~~~a~~---~----d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALA---E----PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTC---S----CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCc---c----CHHHHHHHHHHHcCCCcEEEEEc
Confidence 999986541 1 13579999999999999999754
No 51
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.40 E-value=4.2e-12 Score=118.08 Aligned_cols=149 Identities=13% Similarity=0.100 Sum_probs=104.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDv 219 (369)
+.+.+|||||||+|..+..++...+..+|++||+++.+++.++++....+. .+++++.+|+.++... ...++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l----~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL----KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC----SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC----CceEEEECcHHHhhcccccCCCceE
Confidence 456799999999999999999887778999999999999999999876632 3599999999887532 12368999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CCCCeeEEEEEEeeccCCcEE
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIG 298 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~ 298 (369)
|++....+ ...+++.+.+.|+|||.+++..+. +. .+.+..+.+.++.. |. ........+|... +...
T Consensus 155 I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g~-~~-~~e~~~~~~~l~~~G~~-~~~~~~~~~p~~~-~~R~ 222 (249)
T 3g89_A 155 AVARAVAP--------LCVLSELLLPFLEVGGAAVAMKGP-RV-EEELAPLPPALERLGGR-LGEVLALQLPLSG-EARH 222 (249)
T ss_dssp EEEESSCC--------HHHHHHHHGGGEEEEEEEEEEECS-CC-HHHHTTHHHHHHHHTEE-EEEEEEEECTTTC-CEEE
T ss_pred EEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeCC-Cc-HHHHHHHHHHHHHcCCe-EEEEEEeeCCCCC-CcEE
Confidence 99865321 246899999999999998875433 21 22334444444443 33 3333333445332 3455
Q ss_pred EEEeecC
Q 017607 299 FLICSTE 305 (369)
Q Consensus 299 f~~ask~ 305 (369)
.++..|.
T Consensus 223 l~~~~k~ 229 (249)
T 3g89_A 223 LVVLEKT 229 (249)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 6666654
No 52
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=2.4e-12 Score=124.87 Aligned_cols=111 Identities=20% Similarity=0.218 Sum_probs=84.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC--CCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP--RGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~--~~~fDv 219 (369)
.+.+|||+|||+|.++..+++.. .+|++||+|+.+++.|++++...+ +++.+++++.+|+.+++.... .++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 46799999999999999999874 399999999999999999987663 233369999999999875321 358999
Q ss_pred EEEcCCC-CCCCcccc-----ccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSD-PVGPAQEL-----VEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~-p~~~~~~L-----~~~ef~~~~~~~LkpgGilv~~ 256 (369)
||+|.+. ...+...+ ...++++.+.++|+|||++++.
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 9988642 11111101 1357899999999999996543
No 53
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=1.3e-11 Score=111.10 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=90.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|.++..+++. ..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.+... .+||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~~~~~--~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL---SPRMRAVQGTAPAALADL--PLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCTTGGGTTS--CCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCEEEEeCchhhhcccC--CCCCEE
Confidence 35679999999999999999988 46899999999999999998766522 237999999998866443 479999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
+++... ... +++.+.+.|+|||.+++...+ .+....+.+.+++.
T Consensus 127 ~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVT----LESETLLTQLHARH 170 (204)
T ss_dssp EECSCC--------CHH-HHHHHHHHSCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred EECCcc--------cHH-HHHHHHHhcCCCcEEEEEecC----cccHHHHHHHHHhC
Confidence 976521 123 899999999999999986543 23445555555554
No 54
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.40 E-value=4.5e-13 Score=116.70 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=84.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||+|||+|..+..+++. +..+|+++|+|+.+++.|++++...+. .++++++.+|+.+++... +++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~-~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKA---ENRFTLLKMEAERAIDCL-TGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTC---GGGEEEECSCHHHHHHHB-CSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECcHHHhHHhh-cCCCCEE
Confidence 35679999999999999999987 457999999999999999998865421 247999999999977654 3579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHH--HhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIA--KALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~--~~LkpgGilv~~~~ 258 (369)
+++.+. .. ....++++.+. ++|+|||++++...
T Consensus 105 ~~~~~~--~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 105 FLDPPY--AK---ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EECCSS--HH---HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCC--Cc---chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 987431 11 11345777777 89999999997654
No 55
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.39 E-value=1.6e-12 Score=116.09 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=83.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++...+. .++++++.+|+.+.- .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~--~~~~~~D~v~ 116 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL---NDRIQIVQGDVHNIP--IEDNYADLIV 116 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECBTTBCS--SCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc---cCceEEEEcCHHHCC--CCcccccEEE
Confidence 3449999999999999999988 457999999999999999998876532 358999999987642 3457899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+........ ....+++.++++|+|||.+++.
T Consensus 117 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 117 SRGSVFFWE----DVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECchHhhcc----CHHHHHHHHHHhCCCCCEEEEE
Confidence 764322111 1357999999999999998874
No 56
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.39 E-value=7.9e-13 Score=118.58 Aligned_cols=109 Identities=17% Similarity=0.230 Sum_probs=83.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCC-ccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK-YDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~-fDvI 220 (369)
.+.+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++...+ +..++++++.+|+.+++....+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 45799999999999999977764 3689999999999999999987652 222589999999998865433468 9999
Q ss_pred EEcCCCCCCCccccccHHHHHHH--HHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTI--AKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~--~~~LkpgGilv~~~~ 258 (369)
++|.+. .. -...++++.+ .++|+|||++++...
T Consensus 130 ~~~~~~--~~---~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 130 FLDPPF--HF---NLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp EECCCS--SS---CHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCC--CC---ccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 987652 11 1134577777 567999999987553
No 57
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.38 E-value=1.5e-12 Score=118.80 Aligned_cols=105 Identities=22% Similarity=0.374 Sum_probs=86.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDvI 220 (369)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++...+. .++++++.+|+.+++.... +++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL---ESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhcccCCCccEE
Confidence 56799999999999999999986667999999999999999999876522 3579999999988654431 3689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+++...+ ....+++.+.+.|+|||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9876432 2357899999999999999874
No 58
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.38 E-value=3.2e-12 Score=113.22 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=85.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+...+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+. .++++++.+|+.++... .+++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL---IDRVTLIKDGHQNMDKY-IDCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC---GGGEEEECSCGGGGGGT-CCSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEECCHHHHhhh-ccCCceE
Confidence 356799999999999999999873 456999999999999999999876421 35899999998876533 3478999
Q ss_pred EEEcCCC-CCCCc----cccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSD-PVGPA----QELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~-p~~~~----~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+++... |.... ......++++.+.++|+|||.+++..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9987533 21110 00112469999999999999988653
No 59
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.37 E-value=8.1e-13 Score=117.60 Aligned_cols=152 Identities=16% Similarity=0.164 Sum_probs=86.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh--CCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ--VPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~~fD 218 (369)
.++.+|||+|||+|..+..+++..+..+++++|+|+.+++.|++++... ..+++++.+|+.+.+.. ...++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-----GAVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-----CCceEEEEcchHhhhhhhhhccCccc
Confidence 4677999999999999999999876779999999999999999988654 12789999999987653 1136899
Q ss_pred EEEEcCCCCCCCc-----ccc-----------------ccHHHHHHHHHhccCCce-EEecccccchhhhHHHHHHHHHH
Q 017607 219 AIIVDSSDPVGPA-----QEL-----------------VEKPFFDTIAKALRPGGV-LCNMAESMWLHTHLIEDMISICR 275 (369)
Q Consensus 219 vIi~D~~~p~~~~-----~~L-----------------~~~ef~~~~~~~LkpgGi-lv~~~~s~~~~~~~~~~i~~~l~ 275 (369)
+|+++.+...... ... +...+++.+.++|+|||+ +++... +.....+..+++.++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 9998754311100 000 016788999999999999 665432 222333333333223
Q ss_pred HHCCCCeeEEEEEEeeccCCcEEEEEeecC
Q 017607 276 ETFKGSVHYAWASVPTYPSGIIGFLICSTE 305 (369)
Q Consensus 276 ~~F~~~v~~~~~~vP~~p~g~w~f~~ask~ 305 (369)
.-|. .+. ..+.+. |...++++.+.
T Consensus 182 ~gf~-~~~----~~~~~~-~~~r~~~~~~~ 205 (215)
T 4dzr_A 182 ERGF-RVR----KVKDLR-GIDRVIAVTRE 205 (215)
T ss_dssp GGTE-ECC----EEECTT-SCEEEEEEEEC
T ss_pred cCCc-eEE----EEEecC-CCEEEEEEEEc
Confidence 3454 222 234444 45667777664
No 60
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.37 E-value=2.6e-12 Score=118.22 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=84.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+. +|+++|+++.+++.+++++...+. ..+++++.+|+.++ ..++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~--~~~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANC---ADRVKGITGSMDNL--PFQNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC--SSCTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECChhhC--CCCCCCEEEE
Confidence 45679999999999999999998654 999999999999999998876532 35799999998654 2335789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...-... -...+++.++++|+|||.+++..
T Consensus 119 ~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 119 WSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 976433221 13579999999999999998754
No 61
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.37 E-value=1.3e-11 Score=121.80 Aligned_cols=132 Identities=13% Similarity=0.095 Sum_probs=94.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~fDv 219 (369)
..++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++..++ +++.+++++.+|+.+++... ..++||+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 56799999999999999999863 4689999999999999999987653 22238999999999987542 1358999
Q ss_pred EEEcCCCCC---CCccc--cccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 220 IIVDSSDPV---GPAQE--LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 220 Ii~D~~~p~---~~~~~--L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
|++|.+.-. ..... -...++++.+.+.|+|||++++.+.+.....+. +.+.+++.+.
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~---~~~~i~~~~~ 350 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQ---FKKQIEKGFG 350 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH---HHHHHHHHHT
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHH---HHHHHHHHHH
Confidence 999875421 11110 112346778899999999999876655443333 3344444444
No 62
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.37 E-value=2.2e-12 Score=117.01 Aligned_cols=127 Identities=15% Similarity=0.157 Sum_probs=91.0
Q ss_pred CCCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+++.+||||||| +|.++..+++.. ..+|+++|+|+.+++.|++++... ..+++++.+|+..+. ..++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~-~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-----NSNVRLVKSNGGIIK-GVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-----TCCCEEEECSSCSST-TTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-----CCCcEEEeCCchhhh-hcccCceeE
Confidence 457899999999 999999999874 468999999999999999998765 227999999974332 223478999
Q ss_pred EEEcCCCCCCCc---------------cccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 220 IIVDSSDPVGPA---------------QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 220 Ii~D~~~p~~~~---------------~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
|+++.+...... .......+++.+.+.|+|||.+++...+.. .....+.+.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~l~~~ 196 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---KLLNVIKERGIKL 196 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---HHHHHHHHHHHHT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---hHHHHHHHHHHHc
Confidence 998754211110 001126799999999999999987543221 3345555556554
No 63
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.37 E-value=3.2e-12 Score=118.85 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=85.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.+++++...+. .++++++.+|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL---QNRVTGIVGSMDDLP--FRNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC---CcCcEEEEcChhhCC--CCCCCEEEE
Confidence 46789999999999999999998 456999999999999999998765532 357999999987642 235789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...... +-...+++.++++|+|||.+++..
T Consensus 119 ~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 119 WSEGAIYN-----IGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EESSCGGG-----TCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEcCCcee-----cCHHHHHHHHHHHcCCCCEEEEEE
Confidence 97543211 123679999999999999998764
No 64
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.37 E-value=9.3e-13 Score=113.31 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=81.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC--CCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP--RGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~--~~~fDv 219 (369)
.+.+|||+|||+|..+..+++... +|+++|+|+.+++.|++++...+ .+++++.+|+.+++.... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG-----LGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT-----CCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC-----CceEEEeccHHHHHHhhhccCCceEE
Confidence 567999999999999999998853 49999999999999999987651 279999999988754321 247999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHH--HhccCCceEEeccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIA--KALRPGGVLCNMAE 258 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~--~~LkpgGilv~~~~ 258 (369)
|+++.+.. . ...++++.+. ++|+|||++++...
T Consensus 114 i~~~~~~~-~-----~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYA-M-----DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTT-S-----CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCc-h-----hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99876432 1 1235677777 99999999987653
No 65
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.36 E-value=1.1e-12 Score=124.44 Aligned_cols=193 Identities=13% Similarity=0.131 Sum_probs=130.0
Q ss_pred ccccceeccccCCCcccccccc--CCCCCcccceeeeeeeEEEeeeCCCceEEEEEecCceeEEEEcCeEeecccchhHH
Q 017607 51 VVSGWFSESQSTSDKTGKTMYF--NNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAY 128 (369)
Q Consensus 51 ~~~~w~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~s~~q~I~v~~~~~~G~~l~lDg~~q~~~~de~~Y 128 (369)
...+|+.++..+.++..+..+. +.++.+. ...-.+.+ .....|.|+|.-.... +|..+.++..+.+..++....
T Consensus 36 ~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~--r~~~~p~~yi~g~~~f-~~~~~~v~~~~lipr~~te~l 111 (284)
T 1nv8_A 36 LEVLLIVSRVLGIRKEDLFLKDLGVSPTEEK-RILELVEK--RASGYPLHYILGEKEF-MGLSFLVEEGVFVPRPETEEL 111 (284)
T ss_dssp HHHHHHHHHHHTCCGGGGCCSSCCCCHHHHH-HHHHHHHH--HHTTCCHHHHHTEEEE-TTEEEECCTTSCCCCTTHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHhccccccccCHH-HHHHHHHH--HHCCCCCeEEeeeeEE-CCeEEEeCCCceecChhHHHH
Confidence 3557888888888888877776 5554331 11100111 1234577877765543 678888886666666653333
Q ss_pred HH-HHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 129 QE-MIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 129 ~e-~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
.+ .+..+.. ..+.+|||||||+|.++..+++. +..+|+++|+|+.+++.|+++....+. ..+++++.+|+.+
T Consensus 112 v~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l---~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 112 VELALELIRK---YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV---SDRFFVRKGEFLE 184 (284)
T ss_dssp HHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC---TTSEEEEESSTTG
T ss_pred HHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECcchh
Confidence 22 2222221 24569999999999999999998 778999999999999999999876532 3469999999988
Q ss_pred HHhhCCCCCc---cEEEEcCCCCC-----------CCccccc----cHHHHHHHH-HhccCCceEEeccc
Q 017607 208 FLRQVPRGKY---DAIIVDSSDPV-----------GPAQELV----EKPFFDTIA-KALRPGGVLCNMAE 258 (369)
Q Consensus 208 ~l~~~~~~~f---DvIi~D~~~p~-----------~~~~~L~----~~ef~~~~~-~~LkpgGilv~~~~ 258 (369)
.+. ++| |+|+++.+-.. .|...++ ..++++.+. +.|+|||++++..+
T Consensus 185 ~~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 185 PFK----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GGG----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred hcc----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 653 368 99998743210 0000000 126899999 99999999997543
No 66
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.36 E-value=2.4e-12 Score=115.47 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=82.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
...+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++...+. ++++++.+|+.+++.. ..++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~D~~~~~~~-~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKA----GNARVVNSNAMSFLAQ-KGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECSCHHHHHSS-CCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEECCHHHHHhh-cCCCCCEEE
Confidence 45799999999999999877764 35899999999999999999876521 5899999999998754 346899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHH--hccCCceEEeccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~--~LkpgGilv~~~~ 258 (369)
+|.+.... ...++++.+.+ +|+|||++++...
T Consensus 128 ~~~p~~~~-----~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFRRG-----LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECCSSSTT-----THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCCC-----cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 87652111 13457777766 4999999987553
No 67
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.35 E-value=5.5e-12 Score=114.58 Aligned_cols=105 Identities=15% Similarity=0.241 Sum_probs=83.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... ++++++.+|+.+.. . .++||+|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~--~-~~~fD~v 113 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYD--F-EEKYDMV 113 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCC--C-CSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccC--C-CCCceEE
Confidence 4568999999999999999999876789999999999999999987643 38999999987753 2 2689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+ .....++++.++++|+|||.+++.
T Consensus 114 ~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 114 VSALSIHHLE--DEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp EEESCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeCccccCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9764322111 111235899999999999999864
No 68
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.35 E-value=4.1e-12 Score=117.21 Aligned_cols=120 Identities=20% Similarity=0.278 Sum_probs=93.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.+ ++++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF---DDRVTIKLKDIYEGI---EEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC---TTTEEEECSCGGGCC---CCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC---CCceEEEECchhhcc---CCCCcCE
Confidence 45679999999999999999988 6678999999999999999999876532 346999999998653 3467999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH---CC
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET---FK 279 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~---F~ 279 (369)
|++|.+++ ..+++.+.++|+|||.+++...+. .....+.+.+++. |.
T Consensus 166 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~g~~f~ 215 (255)
T 3mb5_A 166 VILDLPQP---------ERVVEHAAKALKPGGFFVAYTPCS----NQVMRLHEKLREFKDYFM 215 (255)
T ss_dssp EEECSSCG---------GGGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHHTGGGBS
T ss_pred EEECCCCH---------HHHHHHHHHHcCCCCEEEEEECCH----HHHHHHHHHHHHcCCCcc
Confidence 99876543 247899999999999998754332 2344555566554 65
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.35 E-value=4.7e-12 Score=120.03 Aligned_cols=108 Identities=17% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.+..+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...+. ..+++++.+|+.++ +++||+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~-----~~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS---PRRKEVRIQGWEEF-----DEPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC---SSCEEEEECCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECCHHHc-----CCCccEE
Confidence 4567999999999999999998844 6899999999999999998876422 34899999998775 4689999
Q ss_pred EEcCCCCCCC-c----cccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGP-A----QELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~-~----~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+ + ..-....+++.+.++|+|||.++++.
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9753321111 0 11123579999999999999998765
No 70
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.34 E-value=6.5e-12 Score=113.04 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=82.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC-CCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.++.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++++...... ...++++++.+|+.... ...++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD--KRFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC--GGGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc--cccCCCCE
Confidence 3567999999999999999999876679999999999999999987654210 01138999999974321 12368999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|++...-...+.. ....+++.++++|+|||+++..
T Consensus 106 V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 106 ATVIEVIEHLDEN--RLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEHHHHHhCCHH--HHHHHHHHHHHhhCCCEEEEEc
Confidence 9964332111110 1247899999999999977753
No 71
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.33 E-value=7.2e-11 Score=102.84 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=93.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++...+. .++++++.+|+.+.+... ++||+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~--~~~D~v 104 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL---GDNVTLMEGDAPEALCKI--PDIDIA 104 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC---CTTEEEEESCHHHHHTTS--CCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC---CcceEEEecCHHHhcccC--CCCCEE
Confidence 456799999999999999999886 7999999999999999998765421 258999999998865432 479999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CC
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FK 279 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~ 279 (369)
+++... .. ...+++.+.+.|+|||.+++...+ ......+.+.+++. |.
T Consensus 105 ~~~~~~--~~-----~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 105 VVGGSG--GE-----LQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDLGFD 153 (192)
T ss_dssp EESCCT--TC-----HHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHTTCC
T ss_pred EECCch--HH-----HHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHCCCc
Confidence 986542 11 257899999999999999875432 23445566666655 63
No 72
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=1.2e-11 Score=116.27 Aligned_cols=145 Identities=12% Similarity=0.067 Sum_probs=102.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.+..+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++...+. .+++++.+|+.++ .. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l----~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL----NNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC----SSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CCEEEEECChHHc-Cc--cCCceEE
Confidence 456799999999999999999986567999999999999999999876522 4689999999987 33 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccch-hhhHHHHHHHHHHHHCCCCeeE-EEEEEeeccCCcEE
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL-HTHLIEDMISICRETFKGSVHY-AWASVPTYPSGIIG 298 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~-~~~~~~~i~~~l~~~F~~~v~~-~~~~vP~~p~g~w~ 298 (369)
++|.+. . ..++++.+.+.|+|||++++....... ..+...+..+.+.+.+...+.. ....+..|..+.|-
T Consensus 191 i~d~p~--~------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~ 262 (272)
T 3a27_A 191 IMGYVH--K------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWH 262 (272)
T ss_dssp EECCCS--S------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEEEEEEEEEEETTEEE
T ss_pred EECCcc--c------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEeEEEEEEEECCCCCE
Confidence 988653 1 235788999999999999865432211 1134556666666654322221 12345555334444
Q ss_pred EE
Q 017607 299 FL 300 (369)
Q Consensus 299 f~ 300 (369)
++
T Consensus 263 ~~ 264 (272)
T 3a27_A 263 VV 264 (272)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 73
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.32 E-value=7.3e-12 Score=112.68 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=82.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC-CCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...... ...++++++.+|+... . ...++||+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~fD~v 106 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-D-KRFHGYDAA 106 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-C-GGGCSCSEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-c-ccCCCcCEE
Confidence 567999999999999999999876679999999999999999987643210 0013899999997432 1 123689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....+++.++++|+|||++++.
T Consensus 107 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 107 TVIEVIEHLDLS--RLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEE
T ss_pred eeHHHHHcCCHH--HHHHHHHHHHHHcCCCEEEEEc
Confidence 965432111111 1257899999999999987754
No 74
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=5.1e-12 Score=113.81 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=82.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++..+ +++++|+++.+++.+++++... .++++++.+|+.+. ..++++||+|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~~D~v 107 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKL--SFEDKTFDYV 107 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSC--CSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcC--CCCCCcEEEE
Confidence 3478999999999999999998864 8999999999999999987654 36899999998764 2234689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......... ....+++.++++|+|||.+++..
T Consensus 108 ~~~~~~~~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 108 IFIDSIVHFEPL--ELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCchHhCCHH--HHHHHHHHHHHHcCCCcEEEEEe
Confidence 976431122211 12568999999999999998754
No 75
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.32 E-value=2.2e-11 Score=119.99 Aligned_cols=127 Identities=13% Similarity=0.140 Sum_probs=92.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||+|||+|.++..+++..+..+|++||+|+.+++.+++++...+.. +..+++++.+|+.+.+ ++++||+|+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~~~---~~~~fD~Ii 297 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGV---EPFRFNAVL 297 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTTTC---CTTCEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhccC---CCCCeeEEE
Confidence 347999999999999999999877789999999999999999998765320 1136899999988753 346899999
Q ss_pred EcCCCCCCC-ccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 222 VDSSDPVGP-AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 222 ~D~~~p~~~-~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
++.+...+. .......++++.+.++|+|||++++....... ....+++.|.
T Consensus 298 ~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~-------~~~~l~~~fg 349 (375)
T 4dcm_A 298 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD-------YFHKLKKIFG 349 (375)
T ss_dssp ECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSC-------HHHHHHHHHS
T ss_pred ECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcC-------HHHHHHHhcC
Confidence 876543211 11112346899999999999999874432211 1244666777
No 76
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=2.4e-11 Score=109.97 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=76.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh--hCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR--QVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~--~~~~~~fD 218 (369)
++..+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... ..++.++.+|+..... .. .++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhccc-cccee
Confidence 456799999999999999999875456899999999987655544332 1468889999876411 12 36899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|+++...+. ....+++.++++|||||.+++.
T Consensus 129 ~V~~~~~~~~------~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDIAQKN------QIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccChh------HHHHHHHHHHHHhCCCCEEEEE
Confidence 9998854321 1234689999999999999875
No 77
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.32 E-value=5.9e-12 Score=112.20 Aligned_cols=102 Identities=12% Similarity=0.055 Sum_probs=82.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|..+..+++..+..+++++|+++.+++.+++++...+ -++++++.+|+.++. +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP---SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC---CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC---ccCCcCEEE
Confidence 3579999999999999999987667899999999999999999877552 235999999988753 246899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+... .. ...+++.+.+.|+|||.+++...
T Consensus 138 ~~~~---~~-----~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAF---AS-----LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCS---SS-----HHHHHHHHTTSEEEEEEEEEEES
T ss_pred Eecc---CC-----HHHHHHHHHHhcCCCcEEEEEeC
Confidence 6432 11 24789999999999999987643
No 78
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.31 E-value=2.7e-12 Score=118.27 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=79.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc----CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH--HhhCCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRH----DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--LRQVPRG 215 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~----~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~--l~~~~~~ 215 (369)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+. . .++++++.+|+.+. +....+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-----~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-----MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-----CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-----CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999999986 556799999999999988772 1 35899999999875 3322234
Q ss_pred CccEEEEcCCCCCCCccccccHHHHHHHHH-hccCCceEEecc
Q 017607 216 KYDAIIVDSSDPVGPAQELVEKPFFDTIAK-ALRPGGVLCNMA 257 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~-~LkpgGilv~~~ 257 (369)
+||+|++|.... ....+++.+.+ .|+|||++++..
T Consensus 152 ~fD~I~~d~~~~-------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA-------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS-------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH-------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 799999987521 23568999997 999999999854
No 79
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.31 E-value=9e-12 Score=111.12 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=81.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++...+. .+++++.+|+.++. +++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~~----~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGI----YDIALQKTSLLADV----DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC----CCCEEEESSTTTTC----CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEeccccccC----CCCceEE
Confidence 45679999999999999998886 356999999999999999999876522 23999999987753 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+++... .. ...+++.+.+.|+|||.+++.
T Consensus 130 ~~~~~~-----~~--~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 130 VANILA-----EI--LLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp EEESCH-----HH--HHHHGGGSGGGEEEEEEEEEE
T ss_pred EECCcH-----HH--HHHHHHHHHHhcCCCCEEEEE
Confidence 986432 11 256889999999999999874
No 80
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.31 E-value=8.6e-12 Score=116.22 Aligned_cols=107 Identities=16% Similarity=0.225 Sum_probs=86.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++...+ .++++++.+|+.+.. .++++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~--~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSLP--FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGCC--SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccCC--CCCCCeeEE
Confidence 46789999999999999999998767899999999999999999887552 257999999988752 335789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+. ...+++.++++|+|||++++..
T Consensus 110 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 97643322221 2478999999999999998753
No 81
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=8.3e-12 Score=115.45 Aligned_cols=104 Identities=16% Similarity=0.276 Sum_probs=82.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|.++..+++.. .+|+++|+++.+++.|++++...+ .++++++.+|+.+. ..++++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~l--~~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQM--PFTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-CC--CSCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHhC--CCCCCCEEEE
Confidence 357799999999999999999885 389999999999999999876542 25799999998764 2345789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+. ...++++++++|+|||.+++.
T Consensus 108 ~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 108 TCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 97643322221 247899999999999999874
No 82
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.31 E-value=5.7e-12 Score=113.05 Aligned_cols=127 Identities=18% Similarity=0.232 Sum_probs=92.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ++++++.+|+.++. ++++||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW------SHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC------SSEEEEECCTTTCC---CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC------CCeEEEEcchhhCC---CCCCccEE
Confidence 346799999999999999999874 58999999999999999987643 58999999988764 35789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc-----cchhhhHHHHHHHHHHHHCC
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES-----MWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s-----~~~~~~~~~~i~~~l~~~F~ 279 (369)
++.......+.. -....+++.+.++|+|||++++.... .|........+.+.+.+.+.
T Consensus 119 ~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (216)
T 3ofk_A 119 VVAEVLYYLEDM-TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALT 181 (216)
T ss_dssp EEESCGGGSSSH-HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSE
T ss_pred EEccHHHhCCCH-HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhcc
Confidence 975432211110 01146799999999999999874321 13223334455566666665
No 83
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.30 E-value=4.6e-11 Score=108.31 Aligned_cols=103 Identities=23% Similarity=0.179 Sum_probs=80.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH--hhCCCCCc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL--RQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l--~~~~~~~f 217 (369)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.++++.... ++++++.+|+.+.. ... .++|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~~~~-~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEYRAL-VPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGGTTT-CCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchhhcc-cCCc
Confidence 45679999999999999999976 34579999999999999998876532 68999999987632 222 3589
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+|++|...+. ....+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVAQPT------QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCHh------HHHHHHHHHHHhcCCCCEEEEE
Confidence 99998865221 1234699999999999998764
No 84
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.30 E-value=1.2e-11 Score=113.03 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=81.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++. ++++.+|+.+++...++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 456899999999999999998873 4799999999999998864 67889999988766566899999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++...-...+. -....+++.++++|+|||.+++...+
T Consensus 106 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDP--ERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCc--HHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 97533211111 11257999999999999999876543
No 85
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.30 E-value=2.8e-11 Score=109.23 Aligned_cols=111 Identities=13% Similarity=0.221 Sum_probs=82.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
++..+|||||||+|.++..+++.. .+|+++|+++.+++.+++++..... .....+++++.+|+.... .++++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCceeE
Confidence 456799999999999999999883 5899999999999999998765422 112347899999987642 33578999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|++.......+ .......+++.++++|+|||.+++.
T Consensus 105 v~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 105 AVMQAFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp EEEESCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcchhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99754321111 1111236999999999999999875
No 86
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.30 E-value=2.5e-11 Score=112.94 Aligned_cols=134 Identities=17% Similarity=0.154 Sum_probs=96.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||+|||+|.++..+++... +|+++|+|+.+++.+++++...+. . ++++.+|+.+.+. +++||+|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~----~-v~~~~~d~~~~~~---~~~fD~V 188 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV----R-PRFLEGSLEAALP---FGPFDLL 188 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC----C-CEEEESCHHHHGG---GCCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECChhhcCc---CCCCCEE
Confidence 4567999999999999999998753 999999999999999998876522 2 8999999988642 3579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CCCCeeEEEEEEeeccCCcEEE
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGF 299 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~f 299 (369)
+++... .. ...+++.+.++|+|||.+++.... ......+.+.+++. |. .+. +- ..+.|..
T Consensus 189 v~n~~~-----~~--~~~~l~~~~~~LkpgG~lils~~~----~~~~~~v~~~l~~~Gf~-~~~-----~~--~~~~W~~ 249 (254)
T 2nxc_A 189 VANLYA-----EL--HAALAPRYREALVPGGRALLTGIL----KDRAPLVREAMAGAGFR-PLE-----EA--AEGEWVL 249 (254)
T ss_dssp EEECCH-----HH--HHHHHHHHHHHEEEEEEEEEEEEE----GGGHHHHHHHHHHTTCE-EEE-----EE--EETTEEE
T ss_pred EECCcH-----HH--HHHHHHHHHHHcCCCCEEEEEeec----cCCHHHHHHHHHHCCCE-EEE-----Ee--ccCCeEE
Confidence 976421 11 256899999999999999874321 12234555555554 54 221 22 2256876
Q ss_pred EEee
Q 017607 300 LICS 303 (369)
Q Consensus 300 ~~as 303 (369)
+.+.
T Consensus 250 l~~~ 253 (254)
T 2nxc_A 250 LAYG 253 (254)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.30 E-value=8.3e-12 Score=118.35 Aligned_cols=115 Identities=22% Similarity=0.218 Sum_probs=82.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC-----------------------------
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG----------------------------- 192 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~----------------------------- 192 (369)
.+++|||||||+|.++..+++..+..+|++||||+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 468999999999999999999866679999999999999999986543210
Q ss_pred --------------------------CCCCCEEEEEcchHHH---HhhCCCCCccEEEEcCCCCCCCc--cccccHHHHH
Q 017607 193 --------------------------FEDPRVRLHIGDAVEF---LRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFD 241 (369)
Q Consensus 193 --------------------------~~~~rv~v~~~Da~~~---l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~ 241 (369)
+ ..+++++.+|.... +.....++||+|++.....+... ..-....+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~-p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVF-PNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSST-TTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccc-cccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0 04899999998632 22224578999997543211000 0012356899
Q ss_pred HHHHhccCCceEEecc
Q 017607 242 TIAKALRPGGVLCNMA 257 (369)
Q Consensus 242 ~~~~~LkpgGilv~~~ 257 (369)
.++++|+|||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999853
No 88
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.30 E-value=1.6e-11 Score=112.98 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=83.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++... .+|+++|+++.+++.+++.+. .++++++.+|+.+. ..++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~--~~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI--AIEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC--CCCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC--CCCCCCeEEEE
Confidence 578999999999999999998853 489999999999999999875 36899999998764 23357899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEeccccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
+...-.... ....+++.++++|+|||.+++...++
T Consensus 114 ~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 114 SSLALHYIA----SFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred Echhhhhhh----hHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 754321111 13578999999999999999865443
No 89
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.29 E-value=9.6e-12 Score=116.69 Aligned_cols=108 Identities=22% Similarity=0.310 Sum_probs=84.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|.++..+++. ..+|+++|+++.+++.|++.+...+. .++++++.+|+.+... ..+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~-~~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGV---SDNMQFIHCAAQDVAS-HLETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CC---GGGEEEEESCGGGTGG-GCSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC---CcceEEEEcCHHHhhh-hcCCCceEE
Confidence 34679999999999999999988 35899999999999999998765421 2689999999987642 235789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++.......+. ...+++.++++|+|||++++...
T Consensus 141 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 141 LFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhcccC----HHHHHHHHHHHcCCCeEEEEEEe
Confidence 97543221111 25799999999999999987653
No 90
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.29 E-value=3.3e-11 Score=113.09 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=83.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhh-cCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPEL-AVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+ ++++||
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~---~~~~fD 181 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI---SDQMYD 181 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC---CSCCEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccC---cCCCcc
Confidence 45679999999999999999987 55679999999999999999987643 2 257999999988743 346899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+|++|.+++ ..+++.+.+.|+|||++++...
T Consensus 182 ~Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 182 AVIADIPDP---------WNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEECCSCG---------GGSHHHHHHTEEEEEEEEEEES
T ss_pred EEEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeC
Confidence 999865432 2578999999999999987654
No 91
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.29 E-value=2.2e-12 Score=115.78 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=77.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhc-----C---CCCCCCEEEEEcchHHHHhhC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA-----V---GFEDPRVRLHIGDAVEFLRQV 212 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~-----~---~~~~~rv~v~~~Da~~~l~~~ 212 (369)
+.+.+|||+|||+|..+..+++.. .+|++||+++.+++.|++...... . .+..++++++++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 467899999999999999999874 589999999999999998753200 0 001357999999987653210
Q ss_pred CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCce
Q 017607 213 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 252 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGi 252 (369)
.++||+|+....-..-+.. ....+++.++++|||||.
T Consensus 99 -~~~fD~v~~~~~l~~l~~~--~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 99 -IGHCAAFYDRAAMIALPAD--MRERYVQHLEALMPQACS 135 (203)
T ss_dssp -HHSEEEEEEESCGGGSCHH--HHHHHHHHHHHHSCSEEE
T ss_pred -CCCEEEEEECcchhhCCHH--HHHHHHHHHHHHcCCCcE
Confidence 1579999964332111111 124589999999999997
No 92
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=1.3e-11 Score=110.31 Aligned_cols=100 Identities=24% Similarity=0.279 Sum_probs=80.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++...+ -++++++.+|+.+.... .++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~--~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQGWQA--RAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccCCcc--CCCccEE
Confidence 45779999999999999999988 4799999999999999999987652 24799999999875433 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+++...+..+ +.+.+.|+|||++++...
T Consensus 148 ~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 148 IVTAAPPEIP----------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESSBCSSCC----------THHHHTEEEEEEEEEEEC
T ss_pred EEccchhhhh----------HHHHHhcccCcEEEEEEc
Confidence 9875443222 257899999999997553
No 93
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.28 E-value=7.2e-12 Score=114.67 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=82.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...+ ..+++++.+|+.++. .++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~--~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT--PEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC--CCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC--CCCCCEEEEE
Confidence 47899999999999999988875 4689999999999999999886541 246999999977653 2345899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++......+.. ....+++.++++|+|||.+++.
T Consensus 152 ~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 152 IQWVIGHLTDQ--HLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 76432211111 1246899999999999999874
No 94
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.28 E-value=9.1e-12 Score=120.21 Aligned_cols=123 Identities=20% Similarity=0.216 Sum_probs=88.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhc-----CCC--CCCCEEEEEcchHHHHhhC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELA-----VGF--EDPRVRLHIGDAVEFLRQV 212 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~-----~~~--~~~rv~v~~~Da~~~l~~~ 212 (369)
..+.+|||||||+|.++..+++. .+..+|+++|+++.+++.|++++.... ..+ ...+++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45679999999999999999987 455799999999999999999887532 011 1258999999998764333
Q ss_pred CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHH
Q 017607 213 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 276 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~ 276 (369)
++++||+|++|..++.. +++.+.++|+|||.+++...+ ......+.+.+++
T Consensus 184 ~~~~fD~V~~~~~~~~~---------~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPHV---------TLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTTT---------THHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHHH---------HHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 34579999998765432 588999999999999975532 2234455555554
No 95
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.28 E-value=1.2e-11 Score=113.67 Aligned_cols=105 Identities=20% Similarity=0.241 Sum_probs=82.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+. .++++++.+|+.+.. . +++||+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~-~~~fD~V 107 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV---SERVHFIHNDAAGYV--A-NEKCDVA 107 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCCTTCC--C-SSCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEECChHhCC--c-CCCCCEE
Confidence 456799999999999999999875 35899999999999999998765422 358999999987753 2 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+ -...+++.++++|+|||.+++.
T Consensus 108 ~~~~~~~~~~----~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 108 ACVGATWIAG----GFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp EEESCGGGTS----SSHHHHHHHTTSEEEEEEEEEE
T ss_pred EECCChHhcC----CHHHHHHHHHHHcCCCeEEEEe
Confidence 9733221111 1357899999999999998874
No 96
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.1e-11 Score=117.27 Aligned_cols=108 Identities=17% Similarity=0.110 Sum_probs=83.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC----CCC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV----PRG 215 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~----~~~ 215 (369)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... ..++++++.+|+.++.... ..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD--TYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC--CCCceEEEEcCHHhCCccccccccCC
Confidence 367899999999999999999753 678999999999999999998765300 1468999999997643211 126
Q ss_pred CccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 216 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+||+|++....... ....+++.++++|+|||.+++
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 89999976432221 246799999999999999986
No 97
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.28 E-value=9.1e-12 Score=111.82 Aligned_cols=115 Identities=16% Similarity=0.203 Sum_probs=88.1
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
.+++..+.. ..+.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++...+. ++++++.+|+.+
T Consensus 27 ~~~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~~ 99 (219)
T 3dh0_A 27 EKVLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL----KNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC----TTEEEEECBTTB
T ss_pred HHHHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeccccc
Confidence 444544432 456799999999999999999874 567999999999999999998876522 479999999876
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 208 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
.. .++++||+|++.......+ ....+++.+.++|+|||.+++.
T Consensus 100 ~~--~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 100 IP--LPDNTVDFIFMAFTFHELS----EPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp CS--SCSSCEEEEEEESCGGGCS----SHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC--CCCCCeeEEEeehhhhhcC----CHHHHHHHHHHHhCCCeEEEEE
Confidence 42 3456899999754322111 1357999999999999999874
No 98
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.28 E-value=3.4e-11 Score=107.70 Aligned_cols=146 Identities=14% Similarity=0.071 Sum_probs=97.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++ +++++.+|+.... .+++||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC---CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC---CCCcEEEE
Confidence 356799999999999999999873 58999999999999999875 3567788877653 35789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccc----------hhhhHHHHHHHHHHHH--CCCCeeEEEEE
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW----------LHTHLIEDMISICRET--FKGSVHYAWAS 288 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~----------~~~~~~~~i~~~l~~~--F~~~v~~~~~~ 288 (369)
++.......+. -....+++.++++|+|||.+++...... ........+.+.+++. |. .+......
T Consensus 107 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~-~~~~~~~~ 183 (211)
T 3e23_A 107 WAHACLLHVPR--DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA-SVAVESSE 183 (211)
T ss_dssp EECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS-EEEEEEEE
T ss_pred EecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE-EEEEEecc
Confidence 97543211111 1135689999999999999987532111 0011234555566654 76 55554444
Q ss_pred EeeccCC--cEEEEEeec
Q 017607 289 VPTYPSG--IIGFLICST 304 (369)
Q Consensus 289 vP~~p~g--~w~f~~ask 304 (369)
...+.+. .|-+++..+
T Consensus 184 ~~~~~~~~~~wl~~~~~~ 201 (211)
T 3e23_A 184 GKGFDQELAQFLHVSVRK 201 (211)
T ss_dssp EECTTSCEEEEEEEEEEC
T ss_pred CCCCCCCCceEEEEEEec
Confidence 4445442 355555443
No 99
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.27 E-value=2.8e-11 Score=112.46 Aligned_cols=107 Identities=21% Similarity=0.247 Sum_probs=83.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++++...+. .++++++.+|+.+. ..++++||+|
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~--~~~~~~fD~v 133 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL---ANRVTFSYADAMDL--PFEDASFDAV 133 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC--CSCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEECccccC--CCCCCCccEE
Confidence 456799999999999999999865 46999999999999999998765422 35799999998764 2335689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...-...+. ...+++.++++|+|||.+++..
T Consensus 134 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPD----RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 96433222111 2578999999999999988654
No 100
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=5.8e-11 Score=117.63 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=90.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++++|||+|||+|..+..+++.. .+|++||+|+.+++.|++++..++. ..++..+|+.+++.... +.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~-----~~~~~~~D~~~~l~~~~-~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGL-----RVDIRHGEALPTLRGLE-GPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCHHHHHHTCC-CCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCC-----CCcEEEccHHHHHHHhc-CCCCEEE
Confidence 47899999999999999999874 3499999999999999999876632 23567999999987653 3499999
Q ss_pred EcCCCCCCCcccc-----ccHHHHHHHHHhccCCceEEecccccchhhhHHHHHH
Q 017607 222 VDSSDPVGPAQEL-----VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMI 271 (369)
Q Consensus 222 ~D~~~p~~~~~~L-----~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~ 271 (369)
+|.+.-......+ ...++++.+.+.|+|||++++.+.+.....+.+..++
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v 340 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVA 340 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHH
Confidence 9864311111111 1246888999999999999876666554444444333
No 101
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=1.3e-10 Score=100.45 Aligned_cols=114 Identities=14% Similarity=0.231 Sum_probs=88.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||+|||+|..+..+++ +..+++++|+++.+++.+++++...+. ++++++.+|+.+.+. +++||+|
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~d~~~~~~---~~~~D~i 104 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNI----KNCQIIKGRAEDVLD---KLEFNKA 104 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTC----CSEEEEESCHHHHGG---GCCCSEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCC----CcEEEEECCcccccc---CCCCcEE
Confidence 3567999999999999999998 467999999999999999998875521 579999999988553 2589999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
+++.. . ....+++.+++. |||.+++...+ ......+.+.+++.
T Consensus 105 ~~~~~---~-----~~~~~l~~~~~~--~gG~l~~~~~~----~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 105 FIGGT---K-----NIEKIIEILDKK--KINHIVANTIV----LENAAKIINEFESR 147 (183)
T ss_dssp EECSC---S-----CHHHHHHHHHHT--TCCEEEEEESC----HHHHHHHHHHHHHT
T ss_pred EECCc---c-----cHHHHHHHHhhC--CCCEEEEEecc----cccHHHHHHHHHHc
Confidence 98655 1 135688888888 99999875433 23445566666655
No 102
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.27 E-value=1.4e-11 Score=114.74 Aligned_cols=108 Identities=16% Similarity=0.030 Sum_probs=79.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhh-------c-CCC-----CCCCEEEEEcchHHH
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-------A-VGF-----EDPRVRLHIGDAVEF 208 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~-------~-~~~-----~~~rv~v~~~Da~~~ 208 (369)
.+.+|||+|||+|..+..+++.. .+|++||+++.+++.|++..... . .++ ..++++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 56799999999999999999884 48999999999999998765310 0 000 136899999999876
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEE
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLC 254 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv 254 (369)
... ..++||+|+....-..-+.. ....+++.+.++|+|||+++
T Consensus 146 ~~~-~~~~FD~V~~~~~l~~l~~~--~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 146 PRA-NIGKFDRIWDRGALVAINPG--DHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GGG-CCCCEEEEEESSSTTTSCGG--GHHHHHHHHHHTEEEEEEEE
T ss_pred Ccc-cCCCEEEEEEhhhhhhCCHH--HHHHHHHHHHHHcCCCeEEE
Confidence 422 12689999964332211211 23568999999999999985
No 103
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.26 E-value=5.5e-11 Score=112.49 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=111.5
Q ss_pred ceeEEEEcC-eEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhc
Q 017607 108 YGKVLVLDG-IVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYF 186 (369)
Q Consensus 108 ~G~~l~lDg-~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~ 186 (369)
.|-.+.+|- .++++...... +..++.. ..+.++|||+|||+|.++..+++.. ..+|+++|+||..++.+++++
T Consensus 95 ~G~~~~~D~~k~~f~~~~~~e-r~ri~~~----~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~ 168 (278)
T 3k6r_A 95 NGIKYKLDVAKIMFSPANVKE-RVRMAKV----AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENI 168 (278)
T ss_dssp TTEEEEEETTTSCCCGGGHHH-HHHHHHH----CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHH
T ss_pred CCEEEEEeccceEEcCCcHHH-HHHHHHh----cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHH
Confidence 466666663 23333332221 2233322 2467899999999999999999885 468999999999999999998
Q ss_pred hhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccccc--chhh
Q 017607 187 PELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM--WLHT 264 (369)
Q Consensus 187 ~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~--~~~~ 264 (369)
..++. ..+++++.+|++++.. .+.||.|+++.+. . ..+|+..+.++|++||++.+..... ....
T Consensus 169 ~~N~v---~~~v~~~~~D~~~~~~---~~~~D~Vi~~~p~--~------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~ 234 (278)
T 3k6r_A 169 HLNKV---EDRMSAYNMDNRDFPG---ENIADRILMGYVV--R------THEFIPKALSIAKDGAIIHYHNTVPEKLMPR 234 (278)
T ss_dssp HHTTC---TTTEEEECSCTTTCCC---CSCEEEEEECCCS--S------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT
T ss_pred HHcCC---CCcEEEEeCcHHHhcc---ccCCCEEEECCCC--c------HHHHHHHHHHHcCCCCEEEEEeeecccccch
Confidence 77643 4589999999998853 4689999987531 1 2468889999999999986532111 1111
Q ss_pred hHHHHHHHHHHHHCCCCee-EEEEEEeeccCCcEEEEE
Q 017607 265 HLIEDMISICRETFKGSVH-YAWASVPTYPSGIIGFLI 301 (369)
Q Consensus 265 ~~~~~i~~~l~~~F~~~v~-~~~~~vP~~p~g~w~f~~ 301 (369)
.....+.+..++. ...+. .....|-+|..+.|-+++
T Consensus 235 ~~~e~i~~~~~~~-g~~v~~~~~~~Vk~yaP~~~hvv~ 271 (278)
T 3k6r_A 235 EPFETFKRITKEY-GYDVEKLNELKIKRYAPGVWHVVL 271 (278)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEEEEEEEEETTTEEEEEE
T ss_pred hHHHHHHHHHHHc-CCcEEEEEEEEEEeECcCccEEEE
Confidence 2223333333332 22232 223346677656675554
No 104
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.26 E-value=1.2e-11 Score=113.82 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=83.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+... ++++++.+|+.+. ..++++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~--~~~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK--EFPENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC--CCCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC--CCCCCcEEEE
Confidence 456799999999999999999874 469999999999999999987532 6899999998775 2345789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+.. ....+++.++++|+|||.+++..
T Consensus 125 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 125 YSRDAILALSLE--NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHHHHHHhcChH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 975432211111 23578999999999999998754
No 105
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.26 E-value=3e-11 Score=110.19 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=81.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh--hCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR--QVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~--~~~~~~fD 218 (369)
....+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... ... ++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccccccC-ccEE
Confidence 456799999999999999999885567999999999999999988653 2689999999876221 122 5899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+|+.+..++. ....+++.+.+.|+|||.+++
T Consensus 146 ~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 146 VIYEDVAQPN------QAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecCChh------HHHHHHHHHHHhCCCCcEEEE
Confidence 9997654321 124679999999999999887
No 106
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.26 E-value=1.2e-11 Score=112.42 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=80.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|..+..+++..+ +|+++|+++.+++.|++.++ . +++++.+|+.+.. ++++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~~---~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDAQ---LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGCC---CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHcC---cCCcccEEE
Confidence 567899999999999999998753 79999999999999999864 2 7999999988762 357899999
Q ss_pred EcCCCCCCCccccccHHHHHHHH-HhccCCceEEecccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIA-KALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~-~~LkpgGilv~~~~s 259 (369)
+...-...+. ...+++.++ ++|+|||.+++...+
T Consensus 109 ~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 109 LTHVLEHIDD----PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp EESCGGGCSS----HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 7543211111 257999999 999999999876533
No 107
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.26 E-value=1.5e-11 Score=115.72 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=85.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ..+++++++|+.++. . +++||+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~ 92 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--L-NDKYDI 92 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--C-SSCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--c-CCCeeE
Confidence 4678999999999999999998755 479999999999999999987654 348999999998752 2 368999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
|++.......+. ...+++.++++|+|||.+++...+
T Consensus 93 v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 997654221111 257999999999999999865433
No 108
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.26 E-value=2.4e-11 Score=109.09 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=85.7
Q ss_pred HHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 127 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 127 ~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
.|.+++..+.. .++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.++ .+++++.+|+.
T Consensus 33 ~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~ 99 (220)
T 3hnr_A 33 HYEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFL 99 (220)
T ss_dssp THHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSS
T ss_pred HHHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChh
Confidence 34566665543 256799999999999999999873 589999999999999999864 47889999987
Q ss_pred HHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 207 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 207 ~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++. .+ ++||+|++.......+ ......+++.++++|+|||.+++..
T Consensus 100 ~~~--~~-~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 100 SFE--VP-TSIDTIVSTYAFHHLT--DDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCC--CC-SCCSEEEEESCGGGSC--HHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcC--CC-CCeEEEEECcchhcCC--hHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 752 22 6899999764322211 1112348999999999999998753
No 109
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=1.8e-11 Score=120.82 Aligned_cols=122 Identities=23% Similarity=0.287 Sum_probs=92.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||+|||+|.++..+++.. .+|++||+|+.+++.|++++... ..+++++.+|+.+.... +++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~~--~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALTE--EARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSCT--TCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhcccc--CCCeEEEE
Confidence 56799999999999999999884 59999999999999999998765 23489999999886532 36899999
Q ss_pred EcCCCCCCCc-cccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 222 VDSSDPVGPA-QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 222 ~D~~~p~~~~-~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
++.+...+.. ..-....+++.++++|+|||.+++...... .....+.+.|.
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l-------~~~~~l~~~f~ 355 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL-------KYEPLLEEKFG 355 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS-------CHHHHHHHHHS
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC-------ChHHHHHHhhc
Confidence 8765433211 111235789999999999999987654322 12244566677
No 110
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.25 E-value=5.4e-12 Score=119.99 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=82.8
Q ss_pred CCCCEEEEEeCcccHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREIS-RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~-k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+.+.+|||||||+|..+..++ ...+..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.. .+ ++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~-~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL---AGQITLHRQDAWKLD--TR-EGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEECCGGGCC--CC-SCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECchhcCC--cc-CCeEE
Confidence 467899999999999999985 444567999999999999999998865422 346999999988752 23 78999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|++.......+ .......+++.++++|+|||++++..
T Consensus 191 v~~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 191 LTSNGLNIYEP-DDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCSSGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECChhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99643221111 11112348999999999999998654
No 111
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.25 E-value=3.1e-11 Score=113.24 Aligned_cols=105 Identities=16% Similarity=0.112 Sum_probs=81.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+...+. .++++++.+|+.++ + ++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~----~-~~fD~v 133 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSEN---LRSKRVLLAGWEQF----D-EPVDRI 133 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCC---CSCEEEEESCGGGC----C-CCCSEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCC---CCCeEEEECChhhC----C-CCeeEE
Confidence 4567999999999999999995543 4999999999999999998765422 35899999998653 3 689999
Q ss_pred EEcCCC-CCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSD-PVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~-p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...- .... -....+++.+.++|+|||.+++..
T Consensus 134 ~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGH---ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCT---TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcCh---HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 965321 1111 123578999999999999998764
No 112
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=2e-11 Score=108.39 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=79.7
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++ ++++++.+|+.++- .++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLS--DSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGG--GSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCcccccc--cCCCCeEEEEe
Confidence 6799999999999999999873 48999999999999999874 47899999988752 33578999997
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.......+. -....+++.++++|+|||.+++..
T Consensus 109 ~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 109 WYSLIHMGP--GELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp ESSSTTCCT--TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhHhcCCH--HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 543222211 123579999999999999998654
No 113
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=5.3e-11 Score=102.65 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=77.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.++++. ++++++.+| . ..++++||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d-~----~~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------DSVITLSDP-K----EIPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------TTSEEESSG-G----GSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------CCcEEEeCC-C----CCCCCceEEE
Confidence 356699999999999999999886 39999999999999999872 478999999 2 2345789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+ ....+++.+++.|+|||.+++.
T Consensus 80 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 80 LFANSFHDMD----DKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp EEESCSTTCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEccchhccc----CHHHHHHHHHHhcCCCCEEEEE
Confidence 9754332221 1357899999999999999864
No 114
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.25 E-value=2.3e-11 Score=114.08 Aligned_cols=117 Identities=18% Similarity=0.302 Sum_probs=90.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.+..+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+. .++++++.+|+.+.+ ++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL---IERVTIKVRDISEGF---DEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC---GGGEEEECCCGGGCC---SCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEEECCHHHcc---cCCccCE
Confidence 34679999999999999999987 5567999999999999999998765421 257999999988763 3468999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHH
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 276 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~ 276 (369)
|++|.+++ .++++.+.++|+|||.+++...+. .....+.+.+++
T Consensus 185 V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLDVPDP---------WNYIDKCWEALKGGGRFATVCPTT----NQVQETLKKLQE 228 (277)
T ss_dssp EEECCSCG---------GGTHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 99876442 257899999999999998765331 223445555554
No 115
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.25 E-value=2.7e-11 Score=106.69 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.... .++++++.+|+.+.. . +++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~--~-~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLT--F-DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCC--C-CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCC--C-CCCceEEE
Confidence 56799999999999999999873 589999999999999999876542 247999999987752 2 46899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+.......+.. ....+++.+.++|+|||.+++
T Consensus 103 ~~~~l~~~~~~--~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 103 STVVLMFLEAK--TIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EESCGGGSCGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred EcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEE
Confidence 76432221111 235789999999999998764
No 116
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=3.1e-11 Score=119.36 Aligned_cols=124 Identities=17% Similarity=0.188 Sum_probs=92.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~fDv 219 (369)
..++|||+|||+|..+..+++. +..+|++||+++.+++.|++++..++. +++++++.+|+.+++... ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~---~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV---EDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5679999999999999999987 356999999999999999999876522 237999999999886532 2468999
Q ss_pred EEEcCCCCCCCccc-----cccHHHHHHHHHhccCCceEEecccccchhhhHHHH
Q 017607 220 IIVDSSDPVGPAQE-----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 269 (369)
Q Consensus 220 Ii~D~~~p~~~~~~-----L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~ 269 (369)
|++|.+.-...... -...+++..+.+.|+|||++++.+.+.....+.+..
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 347 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKD 347 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHH
Confidence 99986432111111 113568899999999999988776665544443333
No 117
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.24 E-value=3e-11 Score=111.16 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=81.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.. ..++++++.+|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAIP--LPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccCC--CCCCCeeEE
Confidence 456799999999999999999873 6899999999999999998722 1468999999986642 335689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+ -...+++.++++|+|||.+++.
T Consensus 109 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 9754322221 1357899999999999998865
No 118
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.24 E-value=2.9e-11 Score=110.76 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=82.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++...+ -++++++.+|+.+. ..++++||+|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~--~~~~~~fD~v 91 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAESL--PFPDDSFDII 91 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTBC--CSCTTCEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEecccccC--CCCCCcEEEE
Confidence 467799999999999999999875 489999999999999999876552 25799999998663 2345789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+. ...+++.++++|+|||.+++.
T Consensus 92 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 92 TCRYAAHHFSD----VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhccC----HHHHHHHHHHHcCCCcEEEEE
Confidence 97643221111 257899999999999998864
No 119
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.24 E-value=1.8e-11 Score=117.06 Aligned_cols=116 Identities=13% Similarity=0.147 Sum_probs=78.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC--CCCEEEEEcch------HHHHhhC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE--DPRVRLHIGDA------VEFLRQV 212 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~--~~rv~v~~~Da------~~~l~~~ 212 (369)
+.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|+++.+....... ..++++++.|. .+.....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 346799999999998776666543 46899999999999999998765421000 01367778877 3222223
Q ss_pred CCCCccEEEEcCCCCCC-CccccccHHHHHHHHHhccCCceEEecccc
Q 017607 213 PRGKYDAIIVDSSDPVG-PAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~-~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++++||+|++-..-... ...+ ...+++.++++|||||++++.+.+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 45789999965432111 1111 257999999999999999876543
No 120
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.24 E-value=1.4e-11 Score=112.23 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=80.8
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++..... ..+++++.+|+.++. ++++||+|++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPK---AEYFSFVKEDVFTWR---PTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGG---GGGEEEECCCTTTCC---CSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCC---CcceEEEECchhcCC---CCCCeeEEEE
Confidence 459999999999999999874 46899999999999999998764211 357999999988753 3458999997
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
.......+. -....+++.++++|+|||.+++.
T Consensus 139 ~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 139 YVFFCAIEP--EMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp ESSTTTSCG--GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhhhcCCH--HHHHHHHHHHHHHCCCCcEEEEE
Confidence 543322221 12357899999999999998864
No 121
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.24 E-value=1.9e-11 Score=116.60 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=83.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+...+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...+. .++++++.+|+.+. ..++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI---DDHVRSRVCNMLDT--PFDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC--CCCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEECChhcC--CCCCCCEeEE
Confidence 456799999999999999999874 36899999999999999998876532 35899999998764 2335789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++....... -...+++.+.++|+|||.+++..
T Consensus 190 ~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYV-----DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGS-----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhC-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 964322111 14679999999999999998654
No 122
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.23 E-value=7.9e-11 Score=105.48 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=79.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh--CCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ--VPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~~fDv 219 (369)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++. .+++++..|+.+.... ..+.+||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCccE
Confidence 56899999999999999999883 5899999999999999986 3567888998876322 22346999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
|++..... .. -...+++.++++|+|||.+++...
T Consensus 120 v~~~~~l~-~~----~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 120 ICANFALL-HQ----DIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEESCCC-SS----CCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECchhh-hh----hHHHHHHHHHHHhCCCeEEEEEec
Confidence 99765433 11 235799999999999999997654
No 123
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.23 E-value=3.3e-11 Score=118.75 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=91.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~fDv 219 (369)
..++|||+|||+|..+..+++. ..+|++||+++.+++.|++++..++. .+++++.+|+.+++... ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~----~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL----GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC----TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999987 47899999999999999999876532 34999999999987542 1468999
Q ss_pred EEEcCCCCCCCccc-----cccHHHHHHHHHhccCCceEEecccccchhhhHHHH
Q 017607 220 IIVDSSDPVGPAQE-----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 269 (369)
Q Consensus 220 Ii~D~~~p~~~~~~-----L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~ 269 (369)
|++|.+.-...... -...+++..+.+.|+|||++++.+.+.....+.+..
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 337 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYA 337 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHH
Confidence 99986531111111 112468899999999999999876655544443333
No 124
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.23 E-value=4.6e-11 Score=109.21 Aligned_cols=102 Identities=21% Similarity=0.292 Sum_probs=82.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..... +++++++.+|+.+... ++++||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~--~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL---GKNVKFFNVDFKDAEV--PEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC---CTTEEEECSCTTTSCC--CTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC---CCcEEEEEcChhhccc--CCCcccEE
Confidence 35679999999999999999988 46999999999999999998765421 3589999999887531 24579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+++..++ ..+++.+.+.|+|||.+++...
T Consensus 163 ~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVDVREP---------WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EECSSCG---------GGGHHHHHHHBCTTCEEEEEES
T ss_pred EECCcCH---------HHHHHHHHHHcCCCCEEEEEeC
Confidence 9865432 2468999999999999997654
No 125
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.23 E-value=3.7e-11 Score=109.30 Aligned_cols=102 Identities=22% Similarity=0.249 Sum_probs=81.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++... .++++++.+|+.+. ..++++||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~--~~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSL--PFENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBC--SSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcC--CCCCCCccEE
Confidence 456799999999999999999883 589999999999999998752 46899999998764 2335789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+ ....+++.++++|+|||.+++..
T Consensus 121 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 121 MAINSLEWTE----EPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEESCTTSSS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChHhhcc----CHHHHHHHHHHHhCCCeEEEEEE
Confidence 9754332211 12478999999999999988754
No 126
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.23 E-value=2.2e-11 Score=110.79 Aligned_cols=105 Identities=21% Similarity=0.256 Sum_probs=81.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
...+|||||||+|..+..+++. .+|+++|+++.+++.|++++... ..+++++.+|+.+.. . +++||+|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v~ 101 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--L-PEPVDAIT 101 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--C-SSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--C-CCCcCEEE
Confidence 4579999999999999999887 58999999999999999987654 357999999987752 2 36899999
Q ss_pred EcC-C-CCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDS-S-DPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~-~-~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+.. . ...... -....+++.++++|+|||.+++...+
T Consensus 102 ~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 102 ILCDSLNYLQTE--ADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ECTTGGGGCCSH--HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCchhhcCCH--HHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 743 1 111111 11356899999999999999975543
No 127
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=4.2e-11 Score=110.15 Aligned_cols=117 Identities=20% Similarity=0.349 Sum_probs=90.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhh-cCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPEL-AVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
....+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+. ..++++||
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~--~~~~~~~D 168 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA--ELEEAAYD 168 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC--CCCTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc--CCCCCCcC
Confidence 45679999999999999999987 55679999999999999999987653 2 36899999998875 12346899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHH
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 276 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~ 276 (369)
+|++|..++ ..+++.+.++|+|||.+++...+. ....++.+.+++
T Consensus 169 ~v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~ 213 (258)
T 2pwy_A 169 GVALDLMEP---------WKVLEKAALALKPDRFLVAYLPNI----TQVLELVRAAEA 213 (258)
T ss_dssp EEEEESSCG---------GGGHHHHHHHEEEEEEEEEEESCH----HHHHHHHHHHTT
T ss_pred EEEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 999876432 257899999999999998755332 233445555543
No 128
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.23 E-value=9.8e-12 Score=110.68 Aligned_cols=109 Identities=16% Similarity=0.323 Sum_probs=82.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|.++..+++... .+|+++|+++.+++.+++++.. .++++++.+|+.+. ..++++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~--~~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL--DFPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC--CSCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC--CCCCCcccEE
Confidence 4567999999999999999998853 3899999999999999998753 36899999998764 2345689999
Q ss_pred EEcCCC---------CCCCcc--ccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSD---------PVGPAQ--ELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~---------p~~~~~--~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++.... ++.... .-....+++.+.++|+|||.+++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 964321 111100 01126789999999999999987653
No 129
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.23 E-value=1.9e-11 Score=112.47 Aligned_cols=111 Identities=17% Similarity=0.281 Sum_probs=85.9
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
.+++..+. ...+.+|||||||+|..+..+++..+..+|+++|+++.+++.++++. ++++++.+|+.++
T Consensus 23 ~~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 90 (259)
T 2p35_A 23 RDLLAQVP---LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATW 90 (259)
T ss_dssp HHHHTTCC---CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTC
T ss_pred HHHHHhcC---CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhc
Confidence 34444443 24567999999999999999998755678999999999999999872 4789999998775
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
. ++++||+|++.......+ -...+++.++++|+|||.+++...
T Consensus 91 ~---~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 91 K---PAQKADLLYANAVFQWVP----DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp C---CSSCEEEEEEESCGGGST----THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred C---ccCCcCEEEEeCchhhCC----CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 3 356899999754332221 135789999999999999987653
No 130
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.23 E-value=2.6e-11 Score=119.33 Aligned_cols=111 Identities=23% Similarity=0.261 Sum_probs=85.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcC---C-CCCCCEEEEEcchHHHHh----hC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAV---G-FEDPRVRLHIGDAVEFLR----QV 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~---~-~~~~rv~v~~~Da~~~l~----~~ 212 (369)
++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... + +..++++++.+|+.+... ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 56799999999999999998863 457999999999999999998754310 1 234789999999887521 23
Q ss_pred CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 213 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++++||+|++.......+. ...+++.++++|+|||++++.
T Consensus 163 ~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 4578999997654322221 357999999999999999874
No 131
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.23 E-value=4e-11 Score=109.06 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=81.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+. ..+++++.+|+.+.. .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKLH--LPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhcc--CCCCCceEEE
Confidence 56799999999999999999874 3489999999999999999865 247999999987742 3356899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+.......+ ....+++.++++|+|||.+++...+
T Consensus 113 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 113 SSLALHYVE----DVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Eeccccccc----hHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 754321111 1357899999999999999876543
No 132
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.22 E-value=1.8e-11 Score=108.95 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=84.1
Q ss_pred HHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 127 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 127 ~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
.|.+++..+.. .+.+.+|||||||+|..+..++... ..+|+++|+++.+++.+++++... ..+++++.+|+.
T Consensus 10 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~ 81 (209)
T 2p8j_A 10 QLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTT
T ss_pred hHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchh
Confidence 45555554332 2456799999999999754444433 358999999999999999987654 357899999987
Q ss_pred HHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 207 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 207 ~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+. ..++++||+|++...-...+ .-....+++.++++|+|||++++..
T Consensus 82 ~~--~~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 82 KL--PFKDESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SC--CSCTTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hC--CCCCCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 64 23356899999743211111 1123578999999999999998754
No 133
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=2.2e-11 Score=118.55 Aligned_cols=109 Identities=22% Similarity=0.186 Sum_probs=83.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++++|||||||+|.++..+++. +..+|++||+++ +++.|++++...+. ..+++++.+|+.+. ..+.++||+|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~~~~~fD~Ii 138 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL---DHVVTIIKGKVEEV--ELPVEKVDIII 138 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC---TTTEEEEESCTTTC--CCSSSCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC---CCcEEEEECcHHHc--cCCCCceEEEE
Confidence 5679999999999999999998 456999999995 99999998765532 35799999999876 23457899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++....... ..-....+++.+.+.|+|||+++....
T Consensus 139 s~~~~~~l~-~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 139 SEWMGYCLF-YESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp ECCCBBTBT-BTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred Ecccccccc-CchhHHHHHHHHHHhCCCCCEEccccc
Confidence 865321111 111235688999999999999985443
No 134
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.22 E-value=7.6e-11 Score=116.60 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=90.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~fDv 219 (369)
.+++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++..+ ++.+++++++.+|+.+++... ..++||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 56799999999999999999874 569999999999999999998765 221127999999999987542 1358999
Q ss_pred EEEcCCCCCCCccc-----cccHHHHHHHHHhccCCceEEecccccchhhh
Q 017607 220 IIVDSSDPVGPAQE-----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTH 265 (369)
Q Consensus 220 Ii~D~~~p~~~~~~-----L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~ 265 (369)
|++|.+.-...... -...+++..+.+.|+|||++++.+.+.....+
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 347 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSD 347 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH
Confidence 99986531111000 11356888999999999999876655444433
No 135
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.22 E-value=3.5e-11 Score=112.92 Aligned_cols=103 Identities=15% Similarity=0.043 Sum_probs=81.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ..+++++.+|+.+... +++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKE-----NLNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCGGGCCC---CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHc-----CCceEEEEeccccccc---cCCccEEE
Confidence 56799999999999999999884 48999999999999999988764 2389999999887532 46899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+.......+. -....+++.+.++|+|||.+++.
T Consensus 190 ~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 190 STVVFMFLNR--ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp ECSSGGGSCG--GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 7653221111 12357999999999999987653
No 136
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.22 E-value=2.9e-11 Score=113.96 Aligned_cols=107 Identities=21% Similarity=0.307 Sum_probs=83.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++...+. .++++++.+|+.+. ..++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~--~~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGL---ADNITVKYGSFLEI--PCEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTC---TTTEEEEECCTTSC--SSCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEEcCcccC--CCCCCCEeEE
Confidence 4567999999999999999998743 4899999999999999998765422 35899999998764 2335789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+. ...+++.++++|+|||.+++..
T Consensus 155 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97533211111 3579999999999999998754
No 137
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.22 E-value=6.4e-11 Score=109.20 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=94.1
Q ss_pred CCCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh-hCCCCCc
Q 017607 140 IPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKY 217 (369)
Q Consensus 140 ~~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~~f 217 (369)
..+..+|||||||+|.++..+++. .+..+|++||+++++++.+++.... .+++..+.+|+..... ....+++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccceE
Confidence 346789999999999999999986 5667999999999999999988754 3689999999876432 1234689
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc--ccc---chhhhHHHHHHHHHHHH-CC
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA--ESM---WLHTHLIEDMISICRET-FK 279 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~--~s~---~~~~~~~~~i~~~l~~~-F~ 279 (369)
|+|++|...|.. ...+++++++.|||||.+++.. .+. ......+++..+.+++. |.
T Consensus 149 DvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 149 DGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCC
T ss_pred EEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCE
Confidence 999988765432 2468999999999999987632 111 11123455556666654 65
No 138
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.22 E-value=3.6e-11 Score=110.18 Aligned_cols=106 Identities=18% Similarity=0.257 Sum_probs=82.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++++... ++++++.+|+.+. ..++++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~--~~~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA--TLPPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC--CCCSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC--CCCCCCeEEE
Confidence 356899999999999999998775 468999999999999999987532 5799999998774 2335689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+. -....+++.++++|+|||++++..
T Consensus 163 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 163 VIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 97543211111 113578999999999999988743
No 139
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.22 E-value=8.5e-11 Score=110.50 Aligned_cols=117 Identities=18% Similarity=0.136 Sum_probs=88.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC--CCCCc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~~f 217 (369)
....+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++...+. ++++++.+|+.++.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~----~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV----LNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC----CcEEEEeCChHhcchhhhhccccC
Confidence 3567999999999999999998643 37999999999999999999876522 47999999998875421 13589
Q ss_pred cEEEEcCCCCC-CCcc-------------ccccHHHHHHHHHhccCCceEEecccccc
Q 017607 218 DAIIVDSSDPV-GPAQ-------------ELVEKPFFDTIAKALRPGGVLCNMAESMW 261 (369)
Q Consensus 218 DvIi~D~~~p~-~~~~-------------~L~~~ef~~~~~~~LkpgGilv~~~~s~~ 261 (369)
|+|++|.+... +... .-...++++.+.+.|+|||.++..+.+..
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 99999854321 1100 01236789999999999999987665543
No 140
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.22 E-value=4.7e-11 Score=117.23 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=81.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+++||||| |+|.++..+++..+..+|++||+|+.+++.|++++...+. .+++++.+|+.+.+....+++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~----~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY----EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC----CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCEEEEEChhhhhchhhccCCccEEE
Confidence 467999999 9999999999876557999999999999999999876632 27999999998854321235899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCce
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGV 252 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGi 252 (369)
+|.+ .+.. . ...+++.+.++|+|||.
T Consensus 247 ~~~p--~~~~-~--~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 247 TDPP--ETLE-A--IRAFVGRGIATLKGPRC 272 (373)
T ss_dssp ECCC--SSHH-H--HHHHHHHHHHTBCSTTC
T ss_pred ECCC--CchH-H--HHHHHHHHHHHcccCCe
Confidence 8763 2222 2 27899999999999993
No 141
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.21 E-value=6.1e-11 Score=114.92 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=88.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||+|||+|.++.. ++ ...+|+++|+++.+++.+++++..++. .++++++.+|+.+++ ++||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l---~~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL---EHKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCC-----CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECChHHhc-----CCCcEE
Confidence 3567999999999999999 87 367999999999999999999876532 247999999999875 579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHC
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETF 278 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F 278 (369)
++|.+. . ..++++.+.+.|+|||++++...++. .....+.+++.+
T Consensus 263 i~dpP~--~------~~~~l~~~~~~L~~gG~l~~~~~~~~-----~~~~~~~l~~~~ 307 (336)
T 2yx1_A 263 IMNLPK--F------AHKFIDKALDIVEEGGVIHYYTIGKD-----FDKAIKLFEKKC 307 (336)
T ss_dssp EECCTT--T------GGGGHHHHHHHEEEEEEEEEEEEESS-----SHHHHHHHHHHS
T ss_pred EECCcH--h------HHHHHHHHHHHcCCCCEEEEEEeecC-----chHHHHHHHHhc
Confidence 987532 1 12689999999999999887554433 234444555553
No 142
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=7.6e-11 Score=102.94 Aligned_cols=102 Identities=23% Similarity=0.308 Sum_probs=78.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.++++++ +++++.+|+.+. ..++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~--~~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVD--QISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTS--CCCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccC--CCCCCceeEE
Confidence 467799999999999999999873 589999999999999998763 588999998764 2234689999
Q ss_pred EEcC-CCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~-~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.. ........ ....+++.+.+.|+|||.+++..
T Consensus 112 ~~~~~~~~~~~~~--~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 112 VSAGNVMGFLAED--GREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp EECCCCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcHHhhcChH--HHHHHHHHHHHHhCCCCEEEEEe
Confidence 9752 11111111 12578999999999999998754
No 143
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.6e-11 Score=110.05 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=80.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC---CCCCc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV---PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~---~~~~f 217 (369)
....+|||||||+|..+..+++... +|++||+|+.+++.++++++ ..+++++.+|+.+..... ....|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 3557899999999999999999864 89999999999999999873 358999999987643211 01249
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+|++.......+.. ....+++.++++|+|||.+++.
T Consensus 126 d~v~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVE--KRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTTSCGG--GHHHHHHHHHHHHTTTCEEEEE
T ss_pred cEEEEcchhhcCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 999987554333221 1357999999999999987653
No 144
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.21 E-value=8.6e-11 Score=112.01 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=82.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++..+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+...+. .++++++.+|+.++ + ++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~----~-~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDT---NRSRQVLLQGWEDF----A-EPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEESCGGGC----C-CCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECChHHC----C-CCcCEE
Confidence 456799999999999999999874 24899999999999999998765422 35799999998654 2 689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...-...+. -....+++.+.++|+|||.+++..
T Consensus 160 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGH--ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCG--GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 97532211111 123679999999999999998754
No 145
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.21 E-value=3.1e-11 Score=107.84 Aligned_cols=103 Identities=18% Similarity=0.244 Sum_probs=80.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+...+|||||||+|..+..+++.. .+|+++|+++.+++.+++. ..++++++.+|+.++ .++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~---~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW---TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC---CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC---CCCCceeEE
Confidence 455799999999999999999883 5999999999999999882 126799999999876 235789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++...-...+. -....+++.++++|+|||.+++...
T Consensus 112 ~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 97543222111 0125789999999999999987643
No 146
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=4e-11 Score=109.35 Aligned_cols=104 Identities=17% Similarity=0.113 Sum_probs=79.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh-hCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~~fD 218 (369)
....+|||||||+|.++..+++.. +..+|+++|+++.+++.+.+..... ++++++.+|+.+... ....++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcEE
Confidence 356799999999999999999873 4579999999998877776655432 579999999987421 11246899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|++|.+.+. ....+++.+.+.|+|||++++.
T Consensus 150 ~V~~~~~~~~------~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 150 VIFADVAQPD------QTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCcc------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9998765211 1234688899999999999874
No 147
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.21 E-value=2e-11 Score=113.00 Aligned_cols=101 Identities=20% Similarity=0.272 Sum_probs=79.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.++ +++++.+|+.++. . +++||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~--~-~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFS--L-GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCC--C-SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCC--c-cCCcCEE
Confidence 456899999999999999999874 489999999999999998753 6899999987752 2 4689999
Q ss_pred EEcC-CCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~-~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.. .-...+ ..-....+++.++++|+|||.+++.
T Consensus 115 ~~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLA-GQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSC-HHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcC-CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9753 211111 1011346899999999999999985
No 148
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.20 E-value=4.9e-11 Score=116.04 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=87.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
....+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++...+. .+++++.+|+.++... .+.||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~----~~i~~~~~D~~~~~~~--~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL----SWIRFLRADARHLPRF--FPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC----TTCEEEECCGGGGGGT--CCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC----CceEEEeCChhhCccc--cCCCCE
Confidence 456789999999999999999865 567899999999999999999876532 2799999999987532 356999
Q ss_pred EEEcCCCCCCCc--cc--cccHHHHHHHHHhccCCceEEecccc
Q 017607 220 IIVDSSDPVGPA--QE--LVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 220 Ii~D~~~p~~~~--~~--L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
|++|.+...... .. -....+++.+++.|+|||.+++.+.+
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 998875433221 11 11257899999999999999876543
No 149
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.20 E-value=6.9e-11 Score=110.43 Aligned_cols=119 Identities=18% Similarity=0.266 Sum_probs=90.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhh-cCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPEL-AVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. + .++++++.+|+.+.. .++++||
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~-~~~v~~~~~d~~~~~--~~~~~~D 173 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-P-PDNWRLVVSDLADSE--LPDGSVD 173 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-C-CTTEEEECSCGGGCC--CCTTCEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-C-CCcEEEEECchHhcC--CCCCcee
Confidence 45679999999999999999985 44679999999999999999987643 20 0 257999999987752 2346899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHH
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 276 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~ 276 (369)
+|+++..+++ ++++.+.++|+|||.+++...+. ..+..+.+.+++
T Consensus 174 ~v~~~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 218 (280)
T 1i9g_A 174 RAVLDMLAPW---------EVLDAVSRLLVAGGVLMVYVATV----TQLSRIVEALRA 218 (280)
T ss_dssp EEEEESSCGG---------GGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEEECCcCHH---------HHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHh
Confidence 9999765432 47899999999999999865432 234555566665
No 150
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.20 E-value=7.8e-11 Score=114.34 Aligned_cols=107 Identities=19% Similarity=0.151 Sum_probs=81.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++++|||||||+|.++..+++.+ ..+|++||+++ +++.|++++...+. .++++++.+|+.++ ..++++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~---~~~i~~~~~d~~~~--~~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKL---EDTITLIKGKIEEV--HLPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTC---TTTEEEEESCTTTS--CCSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCC---CCcEEEEEeeHHHh--cCCCCcEEEE
Confidence 456799999999999999999884 56999999997 89999998765422 36899999998875 2334689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+++..... .........+++.+.+.|+|||+++.
T Consensus 136 vs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 136 ISEWMGYF-LLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EECCCBTT-BTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEcCchhh-ccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 97652111 10111124688999999999999983
No 151
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.20 E-value=2.4e-11 Score=113.88 Aligned_cols=114 Identities=20% Similarity=0.166 Sum_probs=84.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.... .+++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKR---RFKVFFRAQDSYGRHMD-LGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCC---SSEEEEEESCTTTSCCC-CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCC---CccEEEEECCccccccC-CCCCcCEE
Confidence 456799999999999999988874 45899999999999999998765421 24799999998764211 35689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++...........-....+++.++++|+|||.+++...+
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 976432210000111357899999999999999976533
No 152
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=4e-11 Score=110.06 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=82.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++++... ..+++++.+|+.+.. . +++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--F-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--C-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--c-CCCccEE
Confidence 356799999999999999999873 58999999999999999987654 347999999988742 2 3689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++......... .-....+++.++++|+|||++++...
T Consensus 110 ~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 110 TMFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EECSSGGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCCchhcCC-HHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 97432211111 01135789999999999999987543
No 153
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.20 E-value=5.4e-11 Score=117.01 Aligned_cols=109 Identities=20% Similarity=0.170 Sum_probs=83.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+++|||||||+|.++..+++.. ..+|++||++ .+++.|++++...+. ..+++++.+|+.++. . +++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~-~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNL---DHIVEVIEGSVEDIS--L-PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTC---TTTEEEEESCGGGCC--C-SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCC---CCeEEEEECchhhcC--c-CCcceEE
Confidence 456899999999999999999884 4699999999 999999998876532 357999999998763 2 2689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+++....... .......+++.+.+.|+|||+++....
T Consensus 134 v~~~~~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLL-RESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBT-TTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhccc-chHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 9865322211 111234689999999999999986543
No 154
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.20 E-value=3.4e-11 Score=110.45 Aligned_cols=107 Identities=9% Similarity=0.084 Sum_probs=85.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++..+|||||||+|.++..+++..+..+|+++|+++..++.|++++..++. ..+++++.+|+.+.+.. .++||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~i~~~~~d~l~~l~~--~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL---KEKIQVRLANGLAAFEE--TDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECchhhhccc--CcCCCEE
Confidence 455799999999999999999987778999999999999999999877643 34899999999876532 1269998
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++.. ....+ -.++++.+.+.|+++|.+++|..
T Consensus 89 viaG-----~Gg~~-i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAG-----MGGRL-IARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEE-----ECHHH-HHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcC-----CChHH-HHHHHHHHHHHhCCCCEEEEECC
Confidence 8631 11111 35689999999999999998653
No 155
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.19 E-value=2.4e-11 Score=114.17 Aligned_cols=116 Identities=15% Similarity=0.100 Sum_probs=83.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvI 220 (369)
++.+|||||||+|..+..+++.. .+|+++|+++.+++.|+++...........++.+..+|+.+.... ..+++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 56799999999999999999884 489999999999999998753221100125789999998876422 245789999
Q ss_pred EEc-CC-CCCCC--ccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVD-SS-DPVGP--AQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D-~~-~p~~~--~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++. .. ..... ...-....+++.++++|+|||++++...+
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 974 21 11111 00011357999999999999999976543
No 156
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=1.7e-11 Score=119.00 Aligned_cols=108 Identities=19% Similarity=0.302 Sum_probs=84.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.+++++... ..+++++.+|+.++. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~~----~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSEV----KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTC----CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEccccccc----cCCeeEEE
Confidence 356899999999999999999876669999999999999999998764 234678999987653 46899999
Q ss_pred EcCCCCCCCc-cccccHHHHHHHHHhccCCceEEeccc
Q 017607 222 VDSSDPVGPA-QELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~-~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++.+...+.. ..-....+++.++++|+|||.+++...
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 8765433221 111235799999999999999987543
No 157
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.19 E-value=6.4e-12 Score=114.88 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=80.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++++...+. .++++++.+|+.++.. +++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~---~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGI---ADKIEFICGDFLLLAS---FLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHGG---GCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC---CcCeEEEECChHHhcc---cCCCCEEE
Confidence 56799999999999999999874 7999999999999999998876521 2489999999998762 46899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.+.. ..... ...+..++++|+|||++++.
T Consensus 150 ~~~~~~--~~~~~--~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWG--GPDYA--TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCS--SGGGG--GSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcC--Ccchh--hhHHHHHHhhcCCcceeHHH
Confidence 875432 21111 11345688899999997653
No 158
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.18 E-value=6.4e-11 Score=105.04 Aligned_cols=100 Identities=13% Similarity=0.281 Sum_probs=79.4
Q ss_pred EEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcC
Q 017607 145 TVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDS 224 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 224 (369)
+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ..+++++.+|+.+. ..++++||+|++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADF--DIVADAWEGIVSIF 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTB--SCCTTTCSEEEEEC
T ss_pred CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhc--CCCcCCccEEEEEh
Confidence 99999999999999999873 58999999999999999987654 34799999998765 23356899999743
Q ss_pred CCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 225 SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 225 ~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
. .. +. -....+++.+.++|+|||.+++..
T Consensus 103 ~-~~-~~--~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 103 C-HL-PS--SLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CC-CH--HHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred h-cC-CH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11 11 123578999999999999998653
No 159
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=1.1e-10 Score=109.19 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=78.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++ +..+|+++|+++.+++.+++.+ ++++++.+|+.++- . +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--c-CCCcCEE
Confidence 3567999999999999999998 3469999999999999999875 36889999987742 2 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.......+ ....+++.++++|+|||.+++..
T Consensus 122 ~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 122 FSNAMLHWVK----EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9754322211 12468999999999999998754
No 160
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.18 E-value=1.2e-10 Score=111.71 Aligned_cols=102 Identities=23% Similarity=0.250 Sum_probs=80.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++...+. ++++++.+|+.+.+.. .++||+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~----~~v~~~~~d~~~~~~~--~~~fD~ 147 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI----ENVIFVCGDGYYGVPE--FSPYDV 147 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCGGGCCGG--GCCEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCeEEEECChhhcccc--CCCeEE
Confidence 3567999999999999999998754 36799999999999999998865422 4599999999875432 357999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
|+++...+.. .+.+.+.|+|||+++++..
T Consensus 148 Iv~~~~~~~~----------~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 148 IFVTVGVDEV----------PETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEECSBBSCC----------CHHHHHHEEEEEEEEEEBC
T ss_pred EEEcCCHHHH----------HHHHHHhcCCCcEEEEEEC
Confidence 9987543211 1578889999999998754
No 161
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=1.2e-10 Score=123.48 Aligned_cols=114 Identities=13% Similarity=0.200 Sum_probs=89.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
..++|||+|||+|+++..+++.. ..+|++||+|+.+++.|++++..++ +++.+++++.+|+.+++... .++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~-~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNG--LTGRAHRLIQADCLAWLREA-NEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHC-CCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEEecCHHHHHHhc-CCCccEEE
Confidence 56799999999999999998864 4689999999999999999987663 33358999999999998764 46899999
Q ss_pred EcCCCCCC-C------ccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSSDPVG-P------AQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~-~------~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+|.+.-.. . ...-...++++.+.++|+|||++++.+.+
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 98753110 0 00012356788999999999999975544
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=8.1e-11 Score=105.54 Aligned_cols=102 Identities=19% Similarity=0.168 Sum_probs=79.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..+.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+...+.. .++||+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~--~~~fD~ 149 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGTLGYEP--LAPYDR 149 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGGGCCGG--GCCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcccCCCC--CCCeeE
Confidence 356799999999999999999875 44699999999999999999887552 24699999998654332 357999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
|+++...+.. .+.+.+.|+|||.+++...
T Consensus 150 v~~~~~~~~~----------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 150 IYTTAAGPKI----------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEESSBBSSC----------CHHHHHTEEEEEEEEEEES
T ss_pred EEECCchHHH----------HHHHHHHcCCCcEEEEEEC
Confidence 9976543211 2478899999999987543
No 163
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=4.8e-11 Score=110.70 Aligned_cols=122 Identities=8% Similarity=0.111 Sum_probs=91.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++...+. ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL---TEQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEecchhhccCc--cccccEE
Confidence 456799999999999999999987778999999999999999999876633 35799999999887632 2369998
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CC
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FK 279 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~ 279 (369)
++. +.... .-.++++...+.|+++|.|++|.-. . ...+.+.+.+. |.
T Consensus 95 via-----gmGg~-lI~~IL~~~~~~L~~~~~lIlq~~~---~---~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 95 VIA-----GMGGT-LIRTILEEGAAKLAGVTKLILQPNI---A---AWQLREWSEQNNWL 142 (244)
T ss_dssp EEE-----EECHH-HHHHHHHHTGGGGTTCCEEEEEESS---C---HHHHHHHHHHHTEE
T ss_pred EEe-----CCchH-HHHHHHHHHHHHhCCCCEEEEEcCC---C---hHHHHHHHHHCCCE
Confidence 852 11111 1346888999999999999987532 2 23444555544 54
No 164
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.17 E-value=1.7e-11 Score=115.98 Aligned_cols=110 Identities=16% Similarity=0.231 Sum_probs=81.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++++....... ..+++++.+|+.++. . +++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~~--~-~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAFA--L-DKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBCC--C-SCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcCC--c-CCCcCEEE
Confidence 45599999999999999999884 589999999999999999876531000 057999999988742 2 46899988
Q ss_pred EcCC-CCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSS-DPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~-~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+... ...... -....+++.++++|+|||.|++...+
T Consensus 156 ~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 156 ISSGSINELDE--ADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECHHHHTTSCH--HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCcccccCCH--HHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 5311 111111 11257899999999999999986544
No 165
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.17 E-value=5.2e-11 Score=108.18 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=82.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.+++++... ..+++++.+|+.++. . +++||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--I-NRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--C-SCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--c-cCCceEE
Confidence 356799999999999999999874 58999999999999999987654 237999999987752 2 2689999
Q ss_pred EEcC-CCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~-~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++.. .-+..+ ..-....+++.++++|+|||++++...+
T Consensus 106 ~~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 106 TCCLDSTNYII-DSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EECTTGGGGCC-SHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEcCccccccC-CHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9753 211111 0011357899999999999999975543
No 166
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.17 E-value=1.6e-10 Score=102.99 Aligned_cols=151 Identities=16% Similarity=0.229 Sum_probs=94.4
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
.+++....+. ++..+|||||||+|+++..+++. ..+|++||+++.. + .++++++.+|+.+.
T Consensus 14 ~ei~~~~~~~--~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------~-------~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYRVV--RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------E-------IAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHCCS--CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------C-------CTTCEEEECCTTSS
T ss_pred HHHHHHcCCC--CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------c-------CCCeEEEEccccCH
Confidence 5555554432 45679999999999999999988 4689999999741 1 25799999997642
Q ss_pred -----Hhh-CC---CCCccEEEEcCCCCCCCcc---c----cccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHH
Q 017607 209 -----LRQ-VP---RGKYDAIIVDSSDPVGPAQ---E----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMIS 272 (369)
Q Consensus 209 -----l~~-~~---~~~fDvIi~D~~~p~~~~~---~----L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~ 272 (369)
+.+ .. .++||+|++|......... . -.....++.+.++|+|||.|++.. +.......+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~----~~~~~~~~~~~ 150 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ----FQGDMTNDFIA 150 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE----ECSTHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE----cCCCCHHHHHH
Confidence 111 11 1489999998753322110 0 011356788999999999998643 12233466777
Q ss_pred HHHHHCCCCeeEEEEEEeeccCCcEEEEEeec
Q 017607 273 ICRETFKGSVHYAWASVPTYPSGIIGFLICST 304 (369)
Q Consensus 273 ~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask 304 (369)
.++..|. .|... ....+-+...-.|++|..
T Consensus 151 ~l~~~F~-~v~~~-kP~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 151 IWRKNFS-SYKIS-KPPASRGSSSEIYIMFFG 180 (191)
T ss_dssp HHGGGEE-EEEEE-CC------CCEEEEEEEE
T ss_pred HHHHhcC-EEEEE-CCCCccCCCceEEEEEee
Confidence 7888887 44332 111222222345677754
No 167
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.16 E-value=9.9e-11 Score=109.52 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=100.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhc-------CC-----CcEEEEEECCH---HHHH-----------HHHhhchhhcC----
Q 017607 142 SPKTVLVVGGGDGGVLREISRH-------DS-----VELIDICEIDK---MVID-----------VSKKYFPELAV---- 191 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~-------~~-----~~~V~~VEid~---~vi~-----------~ar~~~~~~~~---- 191 (369)
++.+||+||+|+|..+..+++. .+ ..+++++|.+| +.++ .+++.+..+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999886653 33 25899999987 4433 55554433210
Q ss_pred ----CCCC--CCEEEEEcchHHHHhhCCC---CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccch
Q 017607 192 ----GFED--PRVRLHIGDAVEFLRQVPR---GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL 262 (369)
Q Consensus 192 ----~~~~--~rv~v~~~Da~~~l~~~~~---~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~ 262 (369)
.+++ .+++++.+|+.+.+..... ..||+|++|.+.|...+ .+++.++++.++++|+|||+|++.+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p-~lw~~~~l~~l~~~L~pGG~l~tysaa--- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNP-DMWTQNLFNAMARLARPGGTLATFTSA--- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCG-GGCCHHHHHHHHHHEEEEEEEEESCCB---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccCh-hhcCHHHHHHHHHHcCCCcEEEEEeCC---
Confidence 1222 4678999999998876532 27999999987766543 688999999999999999999986533
Q ss_pred hhhHHHHHHHHHHHH-CCCCeeEEEEEEeeccCCcEEEEEeecC
Q 017607 263 HTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGFLICSTE 305 (369)
Q Consensus 263 ~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~f~~ask~ 305 (369)
..+.+.+.+. |. ...+|.++ +...++.+.+.
T Consensus 216 -----~~vrr~L~~aGF~------v~~~~g~~-~kr~m~~a~~~ 247 (257)
T 2qy6_A 216 -----GFVRRGLQEAGFT------MQKRKGFG-RKREMLCGVME 247 (257)
T ss_dssp -----HHHHHHHHHHTEE------EEEECCST-TCCCEEEEEEC
T ss_pred -----HHHHHHHHHCCCE------EEeCCCCC-CCCceEEEEec
Confidence 1233445544 43 34567664 34555655554
No 168
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.16 E-value=6.9e-11 Score=108.74 Aligned_cols=106 Identities=10% Similarity=0.106 Sum_probs=85.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
++..+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++...+. ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl---~~~I~~~~gD~l~~~~~--~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL---TSKIDVRLANGLSAFEE--ADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECchhhcccc--ccccCEE
Confidence 456799999999999999999987778999999999999999999877633 35899999999887642 2379998
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++.. .... .-.+++....+.|+++|.|++|.
T Consensus 95 viaG-----mGg~-lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 95 TICG-----MGGR-LIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEE-----ECHH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeC-----CchH-HHHHHHHHHHHHhCcCCEEEEEC
Confidence 8521 1111 13468888999999999999875
No 169
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.15 E-value=3.8e-10 Score=106.23 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=81.4
Q ss_pred CCCEEEEEeCcc---cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH--H-------
Q 017607 142 SPKTVLVVGGGD---GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--L------- 209 (369)
Q Consensus 142 ~p~~VLdIG~G~---G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~--l------- 209 (369)
...+|||||||+ |.++..+.+..+..+|++||+|+.|++.|++.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 457999999999 98877776665667999999999999999998742 36899999998753 1
Q ss_pred hhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 210 RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 210 ~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
...+..+||+|++...-+..+.. -...+++.++++|+|||.|++..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEE
Confidence 12222479999975543322211 23578999999999999998654
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=1.7e-11 Score=113.17 Aligned_cols=111 Identities=16% Similarity=0.210 Sum_probs=79.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhh---cCCCCCCC-------------------
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPEL---AVGFEDPR------------------- 197 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~---~~~~~~~r------------------- 197 (369)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++... +. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL---TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH---HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc---cccchhhhhhhhhcccccchhh
Confidence 4679999999999999999886 44578999999999999999876432 10 011
Q ss_pred ------EE-------------EEEcchHHHHhh---CCCCCccEEEEcCCCCCCCc-c----ccccHHHHHHHHHhccCC
Q 017607 198 ------VR-------------LHIGDAVEFLRQ---VPRGKYDAIIVDSSDPVGPA-Q----ELVEKPFFDTIAKALRPG 250 (369)
Q Consensus 198 ------v~-------------v~~~Da~~~l~~---~~~~~fDvIi~D~~~p~~~~-~----~L~~~ef~~~~~~~Lkpg 250 (369)
++ ++.+|+.+.+.. ...++||+|+++.+-..... . .-....+++.+.++|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 55 999998875421 02347999998743211110 0 012347899999999999
Q ss_pred ceEEe
Q 017607 251 GVLCN 255 (369)
Q Consensus 251 Gilv~ 255 (369)
|++++
T Consensus 208 G~l~~ 212 (250)
T 1o9g_A 208 AVIAV 212 (250)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99997
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.15 E-value=1.6e-11 Score=113.38 Aligned_cols=81 Identities=11% Similarity=0.132 Sum_probs=63.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCC---CCCc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVP---RGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~---~~~f 217 (369)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+. ..+++++.+|+.+ ++...+ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL---SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC---CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 46799999999999999988764457999999999999999999875522 3469999999766 232222 2589
Q ss_pred cEEEEcCC
Q 017607 218 DAIIVDSS 225 (369)
Q Consensus 218 DvIi~D~~ 225 (369)
|+|+++.+
T Consensus 142 D~i~~npp 149 (254)
T 2h00_A 142 DFCMCNPP 149 (254)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99998754
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.15 E-value=1.6e-10 Score=104.55 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=80.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHH----h
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFL----R 210 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-----~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l----~ 210 (369)
.+..+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+..++++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 356799999999999999999874 346999999999999999998876520 001357999999998743 2
Q ss_pred hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 211 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
. .++||+|+++...+. +++.+.+.|+|||++++..
T Consensus 159 ~--~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 E--LGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp H--HCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEE
T ss_pred c--CCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEE
Confidence 2 357999998754321 3468889999999998754
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.15 E-value=1.1e-10 Score=106.12 Aligned_cols=106 Identities=20% Similarity=0.145 Sum_probs=79.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC------CcEEEEEECCHHHHHHHHhhchhhcC-CCCCCCEEEEEcchHHHHhhCC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS------VELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~------~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~ 213 (369)
....+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++..... .+..++++++.+|+.+.+..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 160 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-- 160 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc--
Confidence 3457999999999999999988533 24899999999999999998765310 00025799999999874332
Q ss_pred CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 214 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
.++||+|+++...+. +.+.+.+.|+|||++++...
T Consensus 161 ~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD----------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSS----------CCHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHH----------HHHHHHHHhcCCCEEEEEEe
Confidence 257999998764322 23678899999999987543
No 174
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.15 E-value=3.6e-11 Score=109.26 Aligned_cols=92 Identities=10% Similarity=0.127 Sum_probs=75.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDv 219 (369)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.++++. ++++++.+|+.+.+. .+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~-~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP-AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC-TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC-CcCCCCEEE
Confidence 456899999999999999999883 69999999999999999872 478999999865442 23 568999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEE
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLC 254 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv 254 (369)
|++.. + ...+++.+.++|+|||.++
T Consensus 115 v~~~~-~---------~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSRR-G---------PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEES-C---------CSGGGGGHHHHEEEEEEEE
T ss_pred EEeCC-C---------HHHHHHHHHHHcCCCcEEE
Confidence 99761 1 1246889999999999998
No 175
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.15 E-value=4.7e-11 Score=106.60 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=82.2
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch
Q 017607 126 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 205 (369)
Q Consensus 126 ~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da 205 (369)
..|.....++ +.+.+|||||||+|.++..++...+..+|+++|||+.+++++++++...+. ..++++ .|.
T Consensus 38 ~fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~---~~~v~~--~d~ 107 (200)
T 3fzg_A 38 DFYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT---TIKYRF--LNK 107 (200)
T ss_dssp HHHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC---SSEEEE--ECC
T ss_pred HHHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CccEEE--ecc
Confidence 3477777765 458899999999999999998877777999999999999999999876522 114554 665
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
.... +.++||+|+.-..-|.-. . .+..+..+.+.|+|||++|..
T Consensus 108 ~~~~---~~~~~DvVLa~k~LHlL~-~---~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 108 ESDV---YKGTYDVVFLLKMLPVLK-Q---QDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHH---TTSEEEEEEEETCHHHHH-H---TTCCHHHHHHTCEEEEEEEEE
T ss_pred cccC---CCCCcChhhHhhHHHhhh-h---hHHHHHHHHHHhCCCCEEEEe
Confidence 5432 357899999643322110 0 011244899999999999853
No 176
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=3e-10 Score=109.03 Aligned_cols=114 Identities=17% Similarity=0.268 Sum_probs=86.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
....+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+. ++++++.+|+.++.. . .++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~----~~v~~~~~D~~~~~~-~-~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV----LNVILFHSSSLHIGE-L-NVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC----CSEEEESSCGGGGGG-G-CCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC----CeEEEEECChhhccc-c-cccCCE
Confidence 356799999999999999999864 347899999999999999999876632 479999999988643 2 458999
Q ss_pred EEEcCCCC-CCC----ccc-------------cccHHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p-~~~----~~~-------------L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
|++|.+.. .+. +.. -...++++.+.+.|+|||.++..+.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 99986521 111 000 012578999999999999998765543
No 177
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.15 E-value=6.5e-11 Score=107.33 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=78.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+ +|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--L-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--c-CCCCcEE
Confidence 4678999999999999999998753 8999999999999999875 36899999987642 2 4689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...........-....+++.++++|+|||.+++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 105 VSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9532110011000112578999999999999999753
No 178
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.14 E-value=1.5e-10 Score=104.88 Aligned_cols=97 Identities=20% Similarity=0.281 Sum_probs=77.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... .+++++.+|+.+.+. ..++||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~--~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE--EEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG--GGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc--cCCCccEE
Confidence 456799999999999999999885 68999999999999999987643 289999999887332 13689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+++...+. +.+.+.+.|+|||++++..
T Consensus 139 ~~~~~~~~----------~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 139 VVWATAPT----------LLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EESSBBSS----------CCHHHHHTEEEEEEEEEEE
T ss_pred EECCcHHH----------HHHHHHHHcCCCcEEEEEE
Confidence 97654321 1246889999999998754
No 179
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.14 E-value=2.6e-10 Score=105.07 Aligned_cols=105 Identities=16% Similarity=0.089 Sum_probs=74.8
Q ss_pred CCCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh-hCCCCCc
Q 017607 140 IPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKY 217 (369)
Q Consensus 140 ~~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~~f 217 (369)
..+..+|||+|||+|..+..+++. .+..+|++||+++.+++...+.... ..++.++.+|+..... ....++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccce
Confidence 345679999999999999999875 4456999999999886544332221 2579999999875421 1113589
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+|++|.+.|.. ...+.+.+.+.|||||.|++.
T Consensus 148 D~I~~d~a~~~~------~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 148 DVLYVDIAQPDQ------TDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCCChhH------HHHHHHHHHHhCCCCeEEEEE
Confidence 999999764221 122445666799999999864
No 180
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.13 E-value=1.4e-09 Score=96.88 Aligned_cols=100 Identities=21% Similarity=0.272 Sum_probs=78.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++... ..+++++.+|+.++ +++||+|+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-----~~~~D~v~ 117 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF-----KGKFKVFIGDVSEF-----NSRVDIVI 117 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG-----TTSEEEEESCGGGC-----CCCCSEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc-----CCCEEEEECchHHc-----CCCCCEEE
Confidence 56799999999999999999874 458999999999999999998765 12799999998874 24899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|.+..... .-....+++.+.+.| ||+++..
T Consensus 118 ~~~p~~~~~--~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQR--KHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSS--TTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EcCCCcccc--CCchHHHHHHHHHhc--CcEEEEE
Confidence 876532221 122457899999988 6766654
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.13 E-value=3.3e-10 Score=102.37 Aligned_cols=117 Identities=22% Similarity=0.206 Sum_probs=84.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCC-CCCCCEEEEEcch
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDA 205 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~Da 205 (369)
+..++..+... ..+..+|||||||+|..+..+++. .+..+|+++|+++.+++.+++++...+.. ....+++++.+|+
T Consensus 64 ~~~~l~~l~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 64 HAYALELLFDQ-LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp HHHHHHHTTTT-SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred HHHHHHHHHhh-CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 34555544321 235679999999999999999986 34469999999999999999987653100 0124799999998
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
...... .++||+|+++...+ .+++.+.+.|+|||++++..
T Consensus 143 ~~~~~~--~~~fD~i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 143 RMGYAE--EAPYDAIHVGAAAP----------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp GGCCGG--GCCEEEEEECSBBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred ccCccc--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 754322 35799999875431 13467889999999998754
No 182
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.13 E-value=5.8e-11 Score=113.18 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=83.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC---CCCCCEEEEEcchHHHHh--hC--C
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG---FEDPRVRLHIGDAVEFLR--QV--P 213 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~---~~~~rv~v~~~Da~~~l~--~~--~ 213 (369)
+++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+...... ....+++++.+|+.+... .. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 356799999999999999998853 579999999999999999987643210 012479999999876520 11 2
Q ss_pred CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 214 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+++||+|++...-++.....-....+++.++++|+|||.+++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 358999997654322200001124789999999999999997543
No 183
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.13 E-value=1.4e-10 Score=114.97 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=85.0
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhh-----cCCCCCCCEEEEE
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-----AVGFEDPRVRLHI 202 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~-----~~~~~~~rv~v~~ 202 (369)
+.+++..+.+ ....+|||||||+|.++..+++..+..+|++||+++.++++|+++.... ..++...+++++.
T Consensus 162 i~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 162 VAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 3555555432 4567999999999999999998766667999999999999998754211 0122236899999
Q ss_pred cchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 203 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 203 ~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|+.+.--...-..||+|+++.+- ..+ . ....+..+.+.|||||.|++.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~--F~p-d--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA--FGP-E--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT--CCH-H--HHHHHHHHHTTSCTTCEEEES
T ss_pred CcccCCccccccCCccEEEEcccc--cCc-h--HHHHHHHHHHcCCCCcEEEEe
Confidence 998764211001369999976432 111 1 235678889999999999864
No 184
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.13 E-value=7.5e-11 Score=109.29 Aligned_cols=103 Identities=18% Similarity=0.316 Sum_probs=78.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++... .+ ++.+|+.+.- .++++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~~~--~~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAEDLP--FPSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHHCC--CCCCCEEEE
Confidence 367899999999999999999873 589999999999999998753 12 7888876642 335689999
Q ss_pred EEcCCC-CCCCccccccHHHHHHHHHhccCCceEEecccccc
Q 017607 221 IVDSSD-PVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW 261 (369)
Q Consensus 221 i~D~~~-p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~ 261 (369)
++.... .... . ...+++.++++|+|||.+++...+.+
T Consensus 119 ~~~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 119 LALGDVLSYVE--N--KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp EECSSHHHHCS--C--HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EEcchhhhccc--c--HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 964211 1111 1 35789999999999999998765543
No 185
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.13 E-value=2.9e-11 Score=110.59 Aligned_cols=109 Identities=13% Similarity=0.031 Sum_probs=77.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECC-HHHHHHH---HhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEID-KMVIDVS---KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid-~~vi~~a---r~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~f 217 (369)
.+.+|||||||+|..+..+++..+..+|++||++ +.+++.| +++....+ -++++++.+|+..+-... .+.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~----~~~v~~~~~d~~~l~~~~-~d~v 98 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG----LSNVVFVIAAAESLPFEL-KNIA 98 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC----CSSEEEECCBTTBCCGGG-TTCE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC----CCCeEEEEcCHHHhhhhc-cCeE
Confidence 5678999999999999999976667899999999 7777776 66654331 257999999987752211 2467
Q ss_pred cEEEEcCCCCCCC-ccccccHHHHHHHHHhccCCceEEe
Q 017607 218 DAIIVDSSDPVGP-AQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 218 DvIi~D~~~p~~~-~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
|.|.+..+.+... .......++++.++++|||||.+++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 7777654322100 0011235689999999999999987
No 186
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=1.3e-10 Score=99.53 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=83.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH-----hh-CC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL-----RQ-VP 213 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l-----~~-~~ 213 (369)
..+.+|||+|||+|..+..+++. .+..+++++|+++ +++. ++++++.+|+.+.- .. .+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 35679999999999999999987 4557999999998 6421 47899999987652 11 23
Q ss_pred CCCccEEEEcCCCCCCCccccc-------cHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 214 RGKYDAIIVDSSDPVGPAQELV-------EKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~-------~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
+++||+|+++.+.......... ...+++.+.++|+|||.+++.... ......+.+.+++.|.
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~~~~~~~ 154 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ----GEGFDEYLREIRSLFT 154 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES----STTHHHHHHHHHHHEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec----CCcHHHHHHHHHHhhh
Confidence 4689999987654332211000 157899999999999999874322 1223455666666676
No 187
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.12 E-value=1.7e-10 Score=112.71 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=82.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+. .++++++.+|+.+.-...+ ++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG---SERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT---GGGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc---ccceEEEEccccccCCCCC-CCcCEE
Confidence 3578999999999999999998877789999999 9999999998765421 2589999999875300122 579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....++++++++|+|||.+++.
T Consensus 253 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 253 WMSQFLDCFSEE--EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp EEESCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEechhhhCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 975433222211 1246899999999999988763
No 188
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=2e-10 Score=102.54 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=76.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|..+..+ +..+++++|+++.+++.+++++ ++++++.+|+.+. ..++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~--~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL--PFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC--CSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC--CCCCCcEEEEE
Confidence 6679999999999998887 2348999999999999999876 3688899998764 23356899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+.......+ ....+++.+.++|+|||.+++...
T Consensus 101 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVE----DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcC----CHHHHHHHHHHHcCCCCEEEEEec
Confidence 764332221 135789999999999999987543
No 189
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.12 E-value=1.3e-10 Score=106.07 Aligned_cols=102 Identities=23% Similarity=0.270 Sum_probs=78.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...+ -++++++.+|+...+.. ..+||+|
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~--~~~fD~I 162 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDGSKGFPP--KAPYDVI 162 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCcccCCCC--CCCccEE
Confidence 3567999999999999999998765 789999999999999999887542 24599999998433222 2359999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+++...+. +.+.+.+.|+|||++++...+
T Consensus 163 i~~~~~~~----------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPK----------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSS----------CCHHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHH----------HHHHHHHhcCCCcEEEEEEec
Confidence 97654321 123678999999999876543
No 190
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.12 E-value=1.5e-10 Score=111.79 Aligned_cols=107 Identities=20% Similarity=0.206 Sum_probs=80.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++++|||||||+|.++..+++.+ ..+|++||++ .+++.|++++...+. .++++++.+|+.+. ..+.++||+|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~---~~~i~~~~~d~~~~--~~~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGF---SDKITLLRGKLEDV--HLPFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTC---TTTEEEEESCTTTS--CCSSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCC---CCCEEEEECchhhc--cCCCCcccEEE
Confidence 56799999999999999999874 5699999999 589999998765422 35799999998875 23346899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++....... .......++..+.+.|+|||+++..
T Consensus 111 s~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 111 SEWMGYFLL-YESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ECCCBTTBS-TTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EeCchhhcc-cHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 864321111 1111346888999999999999843
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.11 E-value=4.3e-10 Score=99.82 Aligned_cols=96 Identities=20% Similarity=0.248 Sum_probs=73.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++. +++++.+|+.++ + ++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~-~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----S-GKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----C-CCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----C-CCeeEE
Confidence 45679999999999999999987 45689999999999999999863 689999998874 2 589999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+++.+-.... .-....+++.+.+.| |+++++
T Consensus 115 ~~~~p~~~~~--~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSVV--KHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred EECCCchhcc--CchhHHHHHHHHHhc--CcEEEE
Confidence 9876532221 112357899999998 555554
No 192
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.10 E-value=2.3e-10 Score=101.27 Aligned_cols=120 Identities=16% Similarity=0.129 Sum_probs=81.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC--CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH---------
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS--VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL--------- 209 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~--~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l--------- 209 (369)
++..+|||||||+|.++..+++..+ ..+|+++|+++.. . .++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~-------~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P-------IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C-------CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C-------CCCceEEEccccchhhhhhccccc
Confidence 3457999999999999999998755 5799999999831 1 246888889886542
Q ss_pred --------------hhCCCCCccEEEEcCCCCCCCc--cccc-----cHHHHHHHHHhccCCceEEecccccchhhhHHH
Q 017607 210 --------------RQVPRGKYDAIIVDSSDPVGPA--QELV-----EKPFFDTIAKALRPGGVLCNMAESMWLHTHLIE 268 (369)
Q Consensus 210 --------------~~~~~~~fDvIi~D~~~p~~~~--~~L~-----~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~ 268 (369)
...++++||+|+++...+.... .... ...+++.+.+.|+|||.+++.... .....
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~ 161 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL----GSQTN 161 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC----STTHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC----CCCHH
Confidence 0023468999998865433210 0000 124788899999999999874321 22345
Q ss_pred HHHHHHHHHCC
Q 017607 269 DMISICRETFK 279 (369)
Q Consensus 269 ~i~~~l~~~F~ 279 (369)
.+...++..|.
T Consensus 162 ~l~~~l~~~f~ 172 (201)
T 2plw_A 162 NLKTYLKGMFQ 172 (201)
T ss_dssp HHHHHHHTTEE
T ss_pred HHHHHHHHHHh
Confidence 56666666665
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.10 E-value=2.8e-10 Score=110.72 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=80.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|.++..+++.+ ..+|++||+++ +++.|++.+...+. .++++++.+|+.++ .. +++||+|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l---~~~v~~~~~d~~~~--~~-~~~~D~Iv 121 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPGKVEEV--SL-PEQVDIII 121 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC---TTTEEEEESCTTTC--CC-SSCEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCC---CCcEEEEEcchhhC--CC-CCceeEEE
Confidence 56799999999999999999873 56999999997 78999988765422 35899999998775 22 35899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++......... ...+.+..+++.|+|||+++....+
T Consensus 122 s~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 122 SEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp ECCCBTTBTTT--SHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred EeCchhcCChH--HHHHHHHHHHhhcCCCeEEEEecCc
Confidence 76432111111 1245778889999999999865433
No 194
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=3.4e-10 Score=98.56 Aligned_cols=114 Identities=11% Similarity=0.201 Sum_probs=79.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++.+|||||||+|.++..+++.. +|+++|+|+.+++. .++++++.+|+.+.+. +++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~---~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN---QESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC---GGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc---cCCCCEEE
Confidence 46699999999999999999875 89999999999986 1468999999887532 36899999
Q ss_pred EcCCCCCCCcc-----ccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CC
Q 017607 222 VDSSDPVGPAQ-----ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FK 279 (369)
Q Consensus 222 ~D~~~p~~~~~-----~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~ 279 (369)
++.+-...... .....++++.+.+.| |||.+++...+. .....+.+.+++. |.
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----~~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----NRPKEVLARLEERGYG 142 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----GCHHHHHHHHHHTTCE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----CCHHHHHHHHHHCCCc
Confidence 86543211110 001245788888889 999998744221 1234444555543 44
No 195
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=113.78 Aligned_cols=107 Identities=19% Similarity=0.185 Sum_probs=80.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
+.+.|||||||+|.++..+++.+ .++|++||.++ +++.|++.+..++. ..+++++.+|..++ .. +++||+||
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~---~~~i~~i~~~~~~~--~l-pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGL---EDRVHVLPGPVETV--EL-PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTC---TTTEEEEESCTTTC--CC-SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCC---CceEEEEeeeeeee--cC-CccccEEE
Confidence 46799999999999999888875 57999999997 78999988766532 46899999998775 33 36899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+.........+. .-..++....+.|+|||+++-..
T Consensus 155 sE~~~~~l~~e~-~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 155 SEWMGYGLLHES-MLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CCCCBTTBTTTC-SHHHHHHHHHHHEEEEEEEESCE
T ss_pred eecccccccccc-hhhhHHHHHHhhCCCCceECCcc
Confidence 765432222111 23457778889999999998543
No 196
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.09 E-value=5.7e-10 Score=112.62 Aligned_cols=114 Identities=16% Similarity=0.239 Sum_probs=88.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..+.+|||+|||+|+.+..+++..+ ..+|+++|+|+.+++.+++++...+. . ++++.+|+.++.... .++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~----~-v~~~~~Da~~l~~~~-~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA----P-LAVTQAPPRALAEAF-GTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC----C-CEEECSCHHHHHHHH-CSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----e-EEEEECCHHHhhhhc-cccCCE
Confidence 3567999999999999999997643 36899999999999999999887633 3 899999999876433 468999
Q ss_pred EEEcCCCCC-CC----cccc-------------ccHHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDPV-GP----AQEL-------------VEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~-~~----~~~L-------------~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
|++|++... +. +... ...++++.+.+.|+|||+|+..+.+.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 999976411 10 1110 12678999999999999999765553
No 197
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.07 E-value=2.5e-10 Score=102.35 Aligned_cols=102 Identities=14% Similarity=0.137 Sum_probs=77.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++. + .+++++|+++.+++.+++++. +++.+|+.++....++++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 45679999999999999999988 4 799999999999999987642 5778887654223345689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++...-...+. ...+++.+++.|+|||.+++...+
T Consensus 98 ~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 98 IFGDVLEHLFD----PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEESCGGGSSC----HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EECChhhhcCC----HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 97532211111 257899999999999999876533
No 198
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=1.8e-10 Score=106.94 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=75.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++. ++++++.+|+.++ ..++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~--~~~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENL--ALPDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSC--CSCTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhC--CCCCCCEeEE
Confidence 46789999999999999999983 47999999999999876653 2799999998764 2345789999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...-.... -...+++.++++|+ ||.+++..
T Consensus 99 ~~~~~l~~~~----~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFS----HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCS----SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhcc----CHHHHHHHHHHHhC-CcEEEEEE
Confidence 9754321111 13578999999999 99766543
No 199
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.07 E-value=4.4e-10 Score=105.32 Aligned_cols=106 Identities=11% Similarity=0.149 Sum_probs=74.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~~~~fDv 219 (369)
++..+|||||||+|.++..+++.. .+|++||+|+.+++.|++++... .+.....|... ..... +++||+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~-~~~fD~ 113 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL-AGHFDF 113 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG-TTCCSE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc-CCCccE
Confidence 456799999999999999999874 58999999999999999987532 23333333221 00111 368999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
|+++..-....... ...+++.+.++| |||+++++...
T Consensus 114 Vv~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 114 VLNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp EEEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred EEEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEecc
Confidence 99865322111111 245899999999 99999976543
No 200
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.07 E-value=3.7e-10 Score=104.86 Aligned_cols=110 Identities=10% Similarity=0.092 Sum_probs=77.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHH------HHHHHHhhchhhcCCCCCCCEEEEEcc-hHHHHhhC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKM------VIDVSKKYFPELAVGFEDPRVRLHIGD-AVEFLRQV 212 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~------vi~~ar~~~~~~~~~~~~~rv~v~~~D-a~~~l~~~ 212 (369)
+++.+|||||||+|..+..+++. .+..+|+++|+++. +++.|++++..... .++++++.+| ....-...
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL---GDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT---GGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC---CCceEEEECChhhhccCCC
Confidence 45679999999999999999987 35579999999997 99999998764321 2579999998 22111112
Q ss_pred CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 213 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++++||+|++...-...+. ...+.+.++++++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 3578999997543211111 1346677777777799988753
No 201
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.07 E-value=4.5e-10 Score=107.93 Aligned_cols=105 Identities=16% Similarity=0.248 Sum_probs=81.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. .++++++.+|..+ ..+ ..||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~---~~p-~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL---SGRAQVVVGSFFD---PLP-AGAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTS---CCC-CSCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc---CcCeEEecCCCCC---CCC-CCCcEEE
Confidence 467999999999999999998877789999999 9999999998765422 3689999999863 233 3799999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+...-...+.. ....++++++++|+|||.+++.
T Consensus 241 ~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 241 LSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEE
T ss_pred EehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 74432211211 1257899999999999998764
No 202
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.07 E-value=1.7e-10 Score=107.02 Aligned_cols=96 Identities=19% Similarity=0.268 Sum_probs=77.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.|++.. +++.++.+|+.+. ..++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~--~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL--PFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC--SBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC--CCCCCceeEE
Confidence 3567999999999999999998755579999999999999999874 3678999998653 2234689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++... ..+++.+.++|+|||.+++...
T Consensus 153 ~~~~~-----------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 153 IRIYA-----------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEESC-----------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred EEeCC-----------hhhHHHHHHhcCCCcEEEEEEc
Confidence 96432 1258899999999999987653
No 203
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.06 E-value=6.2e-10 Score=109.69 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=84.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-------------CCCCCCEEEEEcchHHH
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-------------GFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-------------~~~~~rv~v~~~Da~~~ 208 (369)
.+.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. ++ .+++++.+|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 56799999999999999999875556899999999999999999876510 12 2399999999998
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+... .++||+|++|.+ +. ..+|++.+.+.|++||++++.
T Consensus 125 ~~~~-~~~fD~I~lDP~---~~-----~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 125 MAER-HRYFHFIDLDPF---GS-----PMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHS-TTCEEEEEECCS---SC-----CHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhc-cCCCCEEEeCCC---CC-----HHHHHHHHHHhcCCCCEEEEE
Confidence 8654 357999998753 22 247899999999999988653
No 204
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.05 E-value=4.4e-10 Score=106.09 Aligned_cols=111 Identities=16% Similarity=0.150 Sum_probs=73.6
Q ss_pred CCCEEEEEeCcccHHHHHH----HhcCCCcEE--EEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh----h
Q 017607 142 SPKTVLVVGGGDGGVLREI----SRHDSVELI--DICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR----Q 211 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l----~k~~~~~~V--~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~----~ 211 (369)
++.+|||||||+|.++..+ +...+..+| ++||++++|++.|++.+.... +....++.+..+|+.++.. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 3568999999999766543 333233444 999999999999999864321 1112234455667665542 1
Q ss_pred CCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 212 VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 212 ~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.++++||+|++...-..-+. ...++++++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 23578999997544322221 2468999999999999998753
No 205
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.05 E-value=2.2e-10 Score=102.97 Aligned_cols=107 Identities=19% Similarity=0.158 Sum_probs=75.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHH----hhchhhcCCCCCCCEEEEEcchHHHHhhCCCCC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSK----KYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 216 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar----~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~ 216 (369)
..+.+|||||||+|..+..+++..+..+|++||+++.+++.+. +..... .-++++++.+|+.+. ...++.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~l--~~~~~~ 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAERL--PPLSGV 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTTC--CSCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhhC--CCCCCC
Confidence 3567899999999999999999877789999999999888532 222221 135899999998874 223344
Q ss_pred ccEEEEcCCCCCCCcc--c-cccHHHHHHHHHhccCCceEEec
Q 017607 217 YDAIIVDSSDPVGPAQ--E-LVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~--~-L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|.|++..+. .... . .-...+++.++++|||||.+++.
T Consensus 100 -d~v~~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 100 -GELHVLMPW--GSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -EEEEEESCC--HHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -CEEEEEccc--hhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 777744321 1100 0 00146899999999999999874
No 206
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.05 E-value=5.6e-10 Score=111.70 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=79.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHH-------HhhchhhcCCCCCCCEEEEEcchHH---HHh
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVS-------KKYFPELAVGFEDPRVRLHIGDAVE---FLR 210 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~a-------r~~~~~~~~~~~~~rv~v~~~Da~~---~l~ 210 (369)
....+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+ +.-.+++++.+|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCccccccccc
Confidence 356799999999999999999875556899999999999999 77765542 112589999987542 121
Q ss_pred hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 211 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
.. .++||+|+++.+. ..+ . ....++.+.+.|+|||.+++.
T Consensus 319 ~~-~~~FDvIvvn~~l-~~~--d--~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 EL-IPQCDVILVNNFL-FDE--D--LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HH-GGGCSEEEECCTT-CCH--H--HHHHHHHHHTTCCTTCEEEES
T ss_pred cc-cCCCCEEEEeCcc-ccc--c--HHHHHHHHHHhCCCCeEEEEe
Confidence 11 2579999975332 111 1 235688999999999999874
No 207
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.05 E-value=8.4e-10 Score=111.20 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=88.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..+.+|||+|||+|+.+..++.. .+..+|+++|+|+..++.+++++...+. .++.++.+|+.++.... +++||+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~----~nv~v~~~Da~~l~~~~-~~~FD~ 178 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV----SNAIVTNHAPAELVPHF-SGFFDR 178 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC----SSEEEECCCHHHHHHHH-TTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CceEEEeCCHHHhhhhc-cccCCE
Confidence 35679999999999999999876 3346899999999999999999887633 46999999999876433 468999
Q ss_pred EEEcCCCC-CCC----ccc-------------cccHHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p-~~~----~~~-------------L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
|++|.+.. .+. +.. -...++++.+.+.|+|||.|+..+.+.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 99997531 111 000 112478999999999999998765543
No 208
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=7.4e-10 Score=108.33 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=82.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. .++++++.+|..+ ..+. .||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l---~~~v~~~~~d~~~---~~p~-~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL---ADRCEILPGDFFE---TIPD-GADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTT---CCCS-SCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc---CCceEEeccCCCC---CCCC-CceEE
Confidence 4578999999999999999999877789999999 9999999998765422 3689999999873 2333 79999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+. .....+++.++++|+|||.+++.
T Consensus 273 ~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 273 LIKHVLHDWDD--DDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EhhhhhccCCH--HHHHHHHHHHHHHcCCCCEEEEE
Confidence 97543221111 11236899999999999998763
No 209
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.04 E-value=3.6e-11 Score=112.08 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=75.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC-------------------------CC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-------------------------DP 196 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-------------------------~~ 196 (369)
+..+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.....+++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 45689999999998777665553 45899999999999999987643211111 01
Q ss_pred CEE-EEEcchHHHH--hhCCCCCccEEEEcCCCCC-CCccccccHHHHHHHHHhccCCceEEec
Q 017607 197 RVR-LHIGDAVEFL--RQVPRGKYDAIIVDSSDPV-GPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 197 rv~-v~~~Da~~~l--~~~~~~~fDvIi~D~~~p~-~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+++ ++.+|..+.. .....++||+|++...... .+... -....+++++++|||||.|++.
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~-~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD-AYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH-HHHHHHHHHHHHcCCCcEEEEE
Confidence 244 8889987631 1112458999997543211 11000 1245789999999999999875
No 210
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.03 E-value=5.1e-10 Score=109.02 Aligned_cols=106 Identities=24% Similarity=0.317 Sum_probs=81.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. ..+++++.+|+.+.+ + ..||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~-~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL---ADRVTVAEGDFFKPL---P-VTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTSCC---S-CCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC---CCceEEEeCCCCCcC---C-CCCCEE
Confidence 4567999999999999999998876779999999 9999999998765422 348999999987532 2 349999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+. .....+++.++++|+|||.+++.
T Consensus 253 ~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 253 LLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 97543221111 11236899999999999987753
No 211
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.02 E-value=7.7e-10 Score=104.27 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=74.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEEC-CHHHHHHHHhhchhhc---CCCC---CCCEEEEEcch----HHHHh
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEI-DKMVIDVSKKYFPELA---VGFE---DPRVRLHIGDA----VEFLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEi-d~~vi~~ar~~~~~~~---~~~~---~~rv~v~~~Da----~~~l~ 210 (369)
.+++|||||||+|.++..+++.. ..+|+++|+ ++.+++.++++...+. .++. .++++++..|. .....
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 56799999999999999998874 458999999 9999999999873210 0111 13688885442 22221
Q ss_pred hCCCCCccEEEE-cCCCCCCCccccccHHHHHHHHHhcc---C--CceEEe
Q 017607 211 QVPRGKYDAIIV-DSSDPVGPAQELVEKPFFDTIAKALR---P--GGVLCN 255 (369)
Q Consensus 211 ~~~~~~fDvIi~-D~~~p~~~~~~L~~~ef~~~~~~~Lk---p--gGilv~ 255 (369)
....++||+|++ |.. .... ....+++.+.++|+ | ||++++
T Consensus 158 ~~~~~~fD~Ii~~dvl---~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLL---SFHQ--AHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHSCSSBSEEEEESCC---SCGG--GHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hccCCCCCEEEEeCcc---cChH--HHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 112468999996 432 2211 13568999999999 9 997654
No 212
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=8.5e-10 Score=97.10 Aligned_cols=120 Identities=14% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCC---------cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE-EcchHHHH-
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSV---------ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFL- 209 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~---------~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~-~~Da~~~l- 209 (369)
+...+|||||||+|.++..+++..+. .+|+++|+++.. . .++++++ .+|.....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~-------~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P-------LEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C-------CTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c-------CCCCeEEEeccCCCHHH
Confidence 45679999999999999999988543 689999999831 0 2467888 88865431
Q ss_pred -----hhCCCCCccEEEEcCCCCCCCccccc-------cHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 210 -----RQVPRGKYDAIIVDSSDPVGPAQELV-------EKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 210 -----~~~~~~~fDvIi~D~~~p~~~~~~L~-------~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
...++++||+|+++............ ...+++.+.++|+|||.+++.... ......+...++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA----GSQSRRLQRRLTEE 161 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC----SGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC----CccHHHHHHHHHHH
Confidence 11223579999987643221100000 136889999999999999875322 12335566667777
Q ss_pred CC
Q 017607 278 FK 279 (369)
Q Consensus 278 F~ 279 (369)
|.
T Consensus 162 f~ 163 (196)
T 2nyu_A 162 FQ 163 (196)
T ss_dssp EE
T ss_pred hc
Confidence 76
No 213
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.02 E-value=9.4e-10 Score=110.69 Aligned_cols=116 Identities=18% Similarity=0.304 Sum_probs=87.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSV-ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~-~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..+.+|||+|||+|+.+..+++..+. .+|+++|+++..++.+++++...+. ++++++.+|+.++....++++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~----~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI----KIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC----CcEEEEEcChhhcchhhccCCCCE
Confidence 34579999999999999999987544 6999999999999999999876522 479999999887532233367999
Q ss_pred EEEcCCCCC-CC----ccc-----------c--ccHHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDPV-GP----AQE-----------L--VEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~-~~----~~~-----------L--~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
|++|.+... +. +.. + ....+++.+.+.|+|||.++..+.+.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999865421 11 000 0 11578999999999999999765543
No 214
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.02 E-value=8.9e-10 Score=105.74 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=80.8
Q ss_pred CEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEc
Q 017607 144 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVD 223 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 223 (369)
.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. .++++++.+|..+. .+ ++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA---GERVSLVGGDMLQE---VP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH---TTSEEEEESCTTTC---CC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC---CCcEEEecCCCCCC---CC-CCCCEEEEc
Confidence 8999999999999999998877779999999 9999999998765422 35899999998762 23 579999975
Q ss_pred CCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 224 SSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 224 ~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
..-...+.. ....+++.++++|+|||.+++.
T Consensus 241 ~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 241 RIIGDLDEA--ASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhccCCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 433211211 1247899999999999988764
No 215
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.02 E-value=8.4e-11 Score=108.27 Aligned_cols=114 Identities=11% Similarity=0.099 Sum_probs=79.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC-------------------------CC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-------------------------DP 196 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-------------------------~~ 196 (369)
.+.+|||||||+|..+..+++... .+|+++|+++.+++.+++++......++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457899999999999999888753 5899999999999999998754210000 01
Q ss_pred CE-EEEEcchHHHHh--hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 197 RV-RLHIGDAVEFLR--QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 197 rv-~v~~~Da~~~l~--~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++ +++.+|+.+... ....++||+|++...-...+...-....+++.+.++|+|||.+++.
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 27 899999876432 1112689999975432100001011356899999999999998864
No 216
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.02 E-value=5.1e-10 Score=108.25 Aligned_cols=107 Identities=19% Similarity=0.275 Sum_probs=82.3
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++..... .++++++.+|..+.... .++.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL---GGRVEFFEKNLLDARNF-EGGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---GGGEEEEECCTTCGGGG-TTCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC---CCceEEEeCCcccCccc-CCCCccEEEE
Confidence 78999999999999999999877789999999 8899999998765422 35799999998765211 2356999997
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
...-...+.. ....+++.++++|+|||.+++.
T Consensus 255 ~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 255 NDCLHYFDAR--EAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecccccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 4432211211 1257899999999999988763
No 217
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.01 E-value=7.5e-10 Score=109.50 Aligned_cols=103 Identities=22% Similarity=0.261 Sum_probs=84.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCC-EEEEEcchHHHHh-hCCCCCcc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPR-VRLHIGDAVEFLR-QVPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~r-v~v~~~Da~~~l~-~~~~~~fD 218 (369)
...+|||++||+|..+.++++.. +..+|++||+++..++.+++++..++. +.+ ++++.+|+.+++. .. .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl---~~~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI---PEDRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC---CGGGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC---CCceEEEEeCCHHHHHHHhh-CCCCc
Confidence 35799999999999999999863 347899999999999999999887633 234 9999999999987 65 45799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|++|.+ +. ..++++.+.+.|++||++++.
T Consensus 128 ~V~lDP~---g~-----~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 128 YVDLDPF---GT-----PVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp EEEECCS---SC-----CHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC---cC-----HHHHHHHHHHHhCCCCEEEEE
Confidence 9998872 21 146899999999999988764
No 218
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.01 E-value=8.5e-10 Score=104.89 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=85.5
Q ss_pred eEEEEcCeE-eecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh
Q 017607 110 KVLVLDGIV-QLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE 188 (369)
Q Consensus 110 ~~l~lDg~~-q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~ 188 (369)
..+.++|.. .+-.+..+...+++..+.+. ...++|||||||+|.++..++++ +..+|++||+++.|++.+.+.
T Consensus 54 d~I~v~g~~~~yvsrg~~Kl~~~l~~~~~~--~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~--- 127 (291)
T 3hp7_A 54 TELKLKGEKLRYVSRGGLKLEKALAVFNLS--VEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ--- 127 (291)
T ss_dssp CCEEETTCCCCSSSTTHHHHHHHHHHTTCC--CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT---
T ss_pred CEEEEcccccccccchHHHHHHHHHhcCCC--ccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh---
Confidence 345555543 23344445556667665442 35679999999999999999887 356999999999999885543
Q ss_pred hcCCCCCCCEEEEE-cchHHHH-hhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 189 LAVGFEDPRVRLHI-GDAVEFL-RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 189 ~~~~~~~~rv~v~~-~Da~~~l-~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++++.... .|++..- ...+..+||+|++|.+... ...++..++++|+|||.+++.
T Consensus 128 ------~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 ------DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ------CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred ------CcccceecccCceecchhhCCCCCCCEEEEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 34554332 3333221 1223345999999876421 135799999999999998764
No 219
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.01 E-value=1e-09 Score=109.63 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=87.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||+|||+|+.+..+++..+..+|+++|+++..++.+++++...+ .+++++.+|+.++....++++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 35679999999999999999987655799999999999999999987652 2478999999876432334689999
Q ss_pred EEcCCCCC-CC----ccc-------------cccHHHHHHHHHhccCCceEEeccccc
Q 017607 221 IVDSSDPV-GP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 221 i~D~~~p~-~~----~~~-------------L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
++|.+... +. +.. -...++++.+.+.|+|||.++..+.+.
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99875321 11 000 012478999999999999999765543
No 220
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.01 E-value=1.7e-09 Score=109.74 Aligned_cols=114 Identities=24% Similarity=0.310 Sum_probs=87.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
...+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++...+. .+++++.+|+.++.... .++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~----~nv~~~~~D~~~~~~~~-~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI----SNVALTHFDGRVFGAAV-PEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC----CSEEEECCCSTTHHHHS-TTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeCCHHHhhhhc-cccCCEE
Confidence 56799999999999999999864 346899999999999999999876632 47999999998865423 4689999
Q ss_pred EEcCCCC-CCC----ccc-------------cccHHHHHHHHHhccCCceEEeccccc
Q 017607 221 IVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 221 i~D~~~p-~~~----~~~-------------L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
++|.+.. .+. +.. -...++++.+.++|||||+|+..+.+.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 9986531 111 110 013578999999999999999765543
No 221
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.00 E-value=2.1e-09 Score=105.40 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=79.6
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC--------
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR-------- 214 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~-------- 214 (369)
+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++. .+++++.+|+.+++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~----~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHI----DNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTC----CSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999999885 36899999999999999999876522 4799999999988754322
Q ss_pred ------CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccc
Q 017607 215 ------GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW 261 (369)
Q Consensus 215 ------~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~ 261 (369)
.+||+|++|.+.. + ..+.+.+.|+++|.++..+.++.
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~-g---------~~~~~~~~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRS-G---------LDSETEKMVQAYPRILYISCNPE 330 (369)
T ss_dssp GSCGGGCCEEEEEECCCTT-C---------CCHHHHHHHTTSSEEEEEESCHH
T ss_pred ccccccCCCCEEEECcCcc-c---------cHHHHHHHHhCCCEEEEEECCHH
Confidence 2799999886432 1 12355667778998887666543
No 222
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.99 E-value=6.7e-10 Score=106.33 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=81.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++..+..+++++|++ .+++.|++++...+. ..+++++.+|+.+. .. ++.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~-~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV---ASRYHTIAGSAFEV--DY-GNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC---GGGEEEEESCTTTS--CC-CSCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC---CcceEEEecccccC--CC-CCCCcEE
Confidence 45679999999999999999988767799999999 999999998765422 34799999998763 22 2359999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 237 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 237 LLPNFLHHFDVA--TCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcchhccCCHH--HHHHHHHHHHHhCCCCcEEEEE
Confidence 974322111111 1257899999999999977653
No 223
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.99 E-value=7.1e-10 Score=107.56 Aligned_cols=106 Identities=30% Similarity=0.408 Sum_probs=80.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. .++++++.+|+.+.+ + ..||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~-~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL---SDRVDVVEGDFFEPL---P-RKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC---TTTEEEEECCTTSCC---S-SCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC---CCceEEEeCCCCCCC---C-CCccEE
Confidence 3567999999999999999998876778999999 9999999998765422 348999999987532 2 359999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 254 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 254 ILSFVLLNWPDH--DAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 975432211111 1246899999999999988753
No 224
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.99 E-value=1e-09 Score=106.33 Aligned_cols=128 Identities=14% Similarity=0.150 Sum_probs=92.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCC-----cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSV-----ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~-----~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~ 216 (369)
.+.+|||+|||+|+++..++++.+. .+++++|+|+.++++|+.++... ..+++++.+|+.... ..++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-----g~~~~i~~~D~l~~~---~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-----RQKMTLLHQDGLANL---LVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-----TCCCEEEESCTTSCC---CCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-----CCCceEEECCCCCcc---ccCC
Confidence 4569999999999999999876432 68999999999999999987654 226899999986632 2468
Q ss_pred ccEEEEcCCCCCCCcc------------c--cccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH
Q 017607 217 YDAIIVDSSDPVGPAQ------------E--LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 277 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~------------~--L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~ 277 (369)
||+|+.+.+-...+.. . .....|++.+.+.|+|||++++...+.+........+.+.+.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 9999988652111100 0 11236899999999999998876655565555555665655554
No 225
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.98 E-value=2.1e-09 Score=104.41 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=81.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+. ..+++++.+|+.+. .. ..+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~--~~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV---ADRMRGIAVDIYKE--SY--PEADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---TTTEEEEECCTTTS--CC--CCCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC---CCCEEEEeCccccC--CC--CCCCEE
Confidence 4678999999999999999999877779999999 9999999998765422 34799999998764 22 235999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++.......+. -....+++.++++|+|||.+++.
T Consensus 261 ~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 261 LFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEE
Confidence 97543221111 11356899999999999998653
No 226
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.97 E-value=1.6e-10 Score=108.70 Aligned_cols=114 Identities=18% Similarity=0.107 Sum_probs=74.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC------------C--------------
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE------------D-------------- 195 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~------------~-------------- 195 (369)
.+.+|||||||+|.....+++. ...+|+++|+++.+++.|++++......++ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5679999999999955444443 245999999999999999986543110000 0
Q ss_pred CCEEEEEcchHHHHh----hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 196 PRVRLHIGDAVEFLR----QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 196 ~rv~v~~~Da~~~l~----~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
..++++..|+.+.+. ..++++||+|++...........-....+++.++++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 125677778876321 1234579999975432111100001356899999999999998864
No 227
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.96 E-value=1.7e-09 Score=106.20 Aligned_cols=145 Identities=17% Similarity=0.085 Sum_probs=96.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+...+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++...+. +.+++++.+|+.+... +.++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl---~~~i~~~~~D~~~~~~--~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV---LDKIKFIQGDATQLSQ--YVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC---GGGCEEEECCGGGGGG--TCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEECChhhCCc--ccCCcCEE
Confidence 456789999999999999999986555899999999999999999876522 2579999999988642 34689999
Q ss_pred EEcCCCCCCC--cc--ccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHH-HCCCCeeEEEEEEeeccCC
Q 017607 221 IVDSSDPVGP--AQ--ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE-TFKGSVHYAWASVPTYPSG 295 (369)
Q Consensus 221 i~D~~~p~~~--~~--~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~-~F~~~v~~~~~~vP~~p~g 295 (369)
++|.+-.... .. .-...++++.++++| +|.+++.+.+ ...+.. .+.+ -|. . ....+.|.++
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~----~~~~~~---~~~~~G~~-~----~~~~~~~nG~ 356 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE----KKAIEE---AIAENGFE-I----IHHRVIGHGG 356 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC----HHHHHH---HHHHTTEE-E----EEEEEEEETT
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC----HHHHHH---HHHHcCCE-E----EEEEEEEcCC
Confidence 9876532211 11 112356888999989 4433332222 222222 2222 132 1 2345667777
Q ss_pred cEEEEEeec
Q 017607 296 IIGFLICST 304 (369)
Q Consensus 296 ~w~f~~ask 304 (369)
.+.-++-++
T Consensus 357 l~~~~~~~~ 365 (373)
T 3tm4_A 357 LMVHLYVVK 365 (373)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEecc
Confidence 777776554
No 228
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=1.1e-09 Score=111.20 Aligned_cols=107 Identities=18% Similarity=0.127 Sum_probs=79.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
.+.+|||||||+|.++..+++. +..+|++||+++ +++.|++++...+. ..+++++.+|+.++ .. +++||+|+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl---~~~v~~~~~d~~~~--~~-~~~fD~Iv 229 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPGKVEEV--SL-PEQVDIII 229 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTC---TTTEEEEESCTTTC--CC-SSCEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCC---CCcEEEEECchhhC--cc-CCCeEEEE
Confidence 5679999999999999999886 456999999999 89999998765422 35899999998774 22 35899999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
++... .....--..+.+..+++.|+|||+++....
T Consensus 230 s~~~~--~~~~~e~~~~~l~~~~~~LkpgG~li~~~~ 264 (480)
T 3b3j_A 230 SEPMG--YMLFNERMLESYLHAKKYLKPSGNMFPTIG 264 (480)
T ss_dssp CCCCH--HHHTCHHHHHHHHHGGGGEEEEEEEESCEE
T ss_pred EeCch--HhcCcHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 64321 110000123467788999999999986543
No 229
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.94 E-value=1e-09 Score=108.41 Aligned_cols=121 Identities=20% Similarity=0.286 Sum_probs=87.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+.+.+|||+|||+|.++..++++. +..+|+++|+|+.+++.| .+++++.+|...+. ..++||+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~---~~~~fD~ 101 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE---PGEAFDL 101 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC---CSSCEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC---ccCCCCE
Confidence 345699999999999999999763 457999999999988765 36899999988753 2368999
Q ss_pred EEEcCCCCCCCc---------cc----------------cccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHH
Q 017607 220 IIVDSSDPVGPA---------QE----------------LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISIC 274 (369)
Q Consensus 220 Ii~D~~~p~~~~---------~~----------------L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l 274 (369)
|+++.+-..... .. -....|++.+.+.|+|||.+++...+.|........+.+.+
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l 181 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFL 181 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHH
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHH
Confidence 998654311110 00 01236899999999999999877666665544555666665
Q ss_pred HHH
Q 017607 275 RET 277 (369)
Q Consensus 275 ~~~ 277 (369)
.+.
T Consensus 182 ~~~ 184 (421)
T 2ih2_A 182 ARE 184 (421)
T ss_dssp HHH
T ss_pred Hhc
Confidence 554
No 230
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.94 E-value=2.7e-09 Score=113.22 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=80.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhchhhcC--CCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAV--GFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V~~VEid~~vi~~ar~~~~~~~~--~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.+.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++..... ....++++++.+|+.++- ...++||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp--~~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD--SRLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC--TTSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC--cccCCee
Confidence 57799999999999999999886 457999999999999999986543211 112358999999988753 2347899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|++...- ..........+++.+.++|+|| .+++.+
T Consensus 799 lVV~~eVL--eHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVI--EHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCG--GGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCch--hhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99974322 1111111235889999999999 665543
No 231
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.94 E-value=5.6e-09 Score=95.96 Aligned_cols=112 Identities=14% Similarity=0.145 Sum_probs=74.8
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch
Q 017607 126 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 205 (369)
Q Consensus 126 ~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da 205 (369)
....+++..+.. .+.+++|||||||+|.++..+++.. ..+|++||+++.+++.+++..+ ++......-
T Consensus 23 ~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~---------~~~~~~~~~ 90 (232)
T 3opn_A 23 LKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDE---------RVVVMEQFN 90 (232)
T ss_dssp HHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCT---------TEEEECSCC
T ss_pred HHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCc---------cccccccce
Confidence 344566665543 2356799999999999999999883 4599999999999999887543 333222211
Q ss_pred HHHHh--hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 206 VEFLR--QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 206 ~~~l~--~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
..++. ......||.+.+|..... + ..+++.++++|+|||.+++.
T Consensus 91 ~~~~~~~~~~~~~~d~~~~D~v~~~-----l--~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 91 FRNAVLADFEQGRPSFTSIDVSFIS-----L--DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGGCCGGGCCSCCCSEEEECCSSSC-----G--GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEeCHhHcCcCCCCEEEEEEEhhh-----H--HHHHHHHHHhccCCCEEEEE
Confidence 12221 122223677776654211 1 45899999999999998864
No 232
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.94 E-value=5.8e-10 Score=110.11 Aligned_cols=108 Identities=23% Similarity=0.313 Sum_probs=75.5
Q ss_pred HHHHHHHhccccCCCCCCEEEEEeCc------ccHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEE
Q 017607 127 AYQEMIAHLPLCSIPSPKTVLVVGGG------DGGVLREISR-HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVR 199 (369)
Q Consensus 127 ~Y~e~l~~~~l~~~~~p~~VLdIG~G------~G~~~~~l~k-~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~ 199 (369)
.|.+.+..+ ..++.+||||||| +|+.+..+++ +.+..+|++||+++.+. . ..++++
T Consensus 205 ~Ye~lL~~l----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~ 267 (419)
T 3sso_A 205 HYDRHFRDY----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIR 267 (419)
T ss_dssp HHHHHHGGG----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEE
T ss_pred HHHHHHHhh----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcE
Confidence 455555443 2467899999999 5555555554 45678999999999972 1 146899
Q ss_pred EEEcchHH--HHhhC--CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 200 LHIGDAVE--FLRQV--PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 200 v~~~Da~~--~l~~~--~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++++|+.+ ++... ..++||+|++|... . .. -...+|+.++++|||||++++.
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH-~--~~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGSH-I--NA--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSCC-C--HH--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEecccccchhhhhhcccCCccEEEECCcc-c--ch--hHHHHHHHHHHhcCCCeEEEEE
Confidence 99999865 33110 13689999987642 1 11 1356899999999999999874
No 233
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.93 E-value=5.7e-10 Score=105.35 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=82.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~fD 218 (369)
.+..+|||||||+|.++..+++. .+|++||+++ ++..+++. +.....+ +.+++++ .+|+.++ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVETF-GWNLITFKSKVDVTKM----EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCCT-TGGGEEEECSCCGGGC----CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhhc-CCCeEEEeccCcHhhC----CCCCcC
Confidence 34679999999999999999987 5799999999 43333221 1000001 1268899 8998763 356899
Q ss_pred EEEEcCCCCCCCccc---cccHHHHHHHHHhccCCc--eEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 219 AIIVDSSDPVGPAQE---LVEKPFFDTIAKALRPGG--VLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 219 vIi~D~~~p~~~~~~---L~~~ef~~~~~~~LkpgG--ilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
+|++|.. ....... .-...+++.+.++|+||| .+++..-.+.. .....+++.++..|.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~--~~~~~~l~~l~~~f~ 213 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS--CDVLEALMKMQARFG 213 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS--HHHHHHHHHHHHHHC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc--hhHHHHHHHHHHHcC
Confidence 9999876 3221110 001136889999999999 88875433221 223356667788887
No 234
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.92 E-value=5.3e-10 Score=104.93 Aligned_cols=126 Identities=11% Similarity=0.070 Sum_probs=82.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~fD 218 (369)
++..+|||||||+|.++..+++. .+|++||+++ ++..+++. +...... +.++.++ .+|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITESY-GWNIVKFKSRVDIHTL----PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCBT-TGGGEEEECSCCTTTS----CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhcc-CCCeEEEecccCHhHC----CCCCCc
Confidence 34679999999999999999887 5799999998 43222211 1000000 1268888 8898764 356899
Q ss_pred EEEEcCCCCCCCccc---cccHHHHHHHHHhccCCc--eEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 219 AIIVDSSDPVGPAQE---LVEKPFFDTIAKALRPGG--VLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 219 vIi~D~~~p~~~~~~---L~~~ef~~~~~~~LkpgG--ilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
+|++|.. ....... .-...+++.+.++|+||| .+++..-.+.. .....++..+++.|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~--~~~~~~l~~l~~~f~ 205 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS--VEVMERLSVMQRKWG 205 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS--HHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC--hhHHHHHHHHHHHcC
Confidence 9999876 2221111 001137889999999999 88875433221 223366677788887
No 235
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.92 E-value=1.9e-09 Score=97.13 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=72.0
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+.+|||||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+. ..++++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~--~~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENL--PLKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBC--CSCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccC--CCCCCCeeEEEE
Confidence 779999999999999988765 9999999999999875 478888997654 233468999997
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.......+ -...+++.+.++|+|||.+++..
T Consensus 109 ~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 109 VTTICFVD----DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp ESCGGGSS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchHhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 54321111 12578999999999999998754
No 236
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=9.7e-10 Score=102.47 Aligned_cols=112 Identities=14% Similarity=0.206 Sum_probs=84.7
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
|...+..+ +.|.+|||||||.|-++..++...+..+|+++|||+.+++++++++..+ ..+.++.+.|...
T Consensus 123 Y~~i~~~i-----~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 123 YRELFRHL-----PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADLLE 192 (281)
T ss_dssp HHHHGGGS-----CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCTTT
T ss_pred HHHHHhcc-----CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeecc
Confidence 55555444 4588999999999999999988878899999999999999999999776 3468889988554
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 208 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
..+.++||+|++...-|.- +.--....| .+.+.|+++|++|.
T Consensus 193 ---~~p~~~~DvaL~lkti~~L--e~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 193 ---DRLDEPADVTLLLKTLPCL--ETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp ---SCCCSCCSEEEETTCHHHH--HHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred ---cCCCCCcchHHHHHHHHHh--hhhhhHHHH-HHHHHhCCCCEEEe
Confidence 3346789999965432211 111112345 78999999999985
No 237
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.88 E-value=1.2e-09 Score=108.27 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=72.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|.++..+++.. .+|+++|+++.+++.|++.-. ......+..+|+.. +.. ++++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~-l~~-~~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADD-VRR-TEGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHH-HHH-HHCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhh-ccc-CCCCEEEE
Confidence 356799999999999999999874 489999999999999998611 01111122233333 221 24689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++...-...+ ....+++.++++|+|||++++..
T Consensus 176 ~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIP----YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEe
Confidence 9754321111 13579999999999999999764
No 238
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.8e-09 Score=103.41 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=82.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEEC----CHHHHHHHHhhchhhcCCCCCCCEEEEEc-chHHHHhhCCCC
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEI----DKMVIDVSKKYFPELAVGFEDPRVRLHIG-DAVEFLRQVPRG 215 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEi----d~~vi~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~~~~~ 215 (369)
++..+|||||||+|+.+..+++. .+|++||+ ++..++.. .. .....++++++.+ |+..+ +.+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~--~~~~~~~v~~~~~~D~~~l----~~~ 147 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PM--STYGWNLVRLQSGVDVFFI----PPE 147 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CC--CSTTGGGEEEECSCCTTTS----CCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hh--hhcCCCCeEEEeccccccC----CcC
Confidence 34579999999999999999987 47999999 44332211 10 0111257999999 87754 246
Q ss_pred CccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCC
Q 017607 216 KYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG 280 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~ 280 (369)
+||+|++|.....+.. ...-...+++.+.++|+|||.|++..-.+. ......++..++..|..
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~~ 212 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHGG 212 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHCC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcCC
Confidence 8999999876432211 110011478889999999999997543322 12345667777888883
No 239
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.88 E-value=1.3e-08 Score=91.80 Aligned_cols=100 Identities=14% Similarity=0.038 Sum_probs=76.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC-CCCEEEEEcchHHH------------
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-DPRVRLHIGDAVEF------------ 208 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-~~rv~v~~~Da~~~------------ 208 (369)
++++||+||+| ..+..+++.. ..+|+.||.|++..+.+++++... ++. ..+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchhh
Confidence 57899999984 7888888864 579999999999999999999865 221 35899999996432
Q ss_pred ------Hh---hC-CCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 209 ------LR---QV-PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 209 ------l~---~~-~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
.. .. ..++||+|++|... ...++..+.+.|+|||++++
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEE
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEE
Confidence 21 11 13689999999742 12567778899999999986
No 240
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.87 E-value=9.2e-09 Score=102.91 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=77.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh--CCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ--VPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~~fD 218 (369)
....+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++...+. .+++++.+|+.+++.. ..+++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~----~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGL----QNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCC----CceEEEECCHHHHhhhhhhhcCCCC
Confidence 34579999999999999999987 47999999999999999999865522 4899999999886532 2245799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+|++|.+.. .. .++++.+. .++|++++.+.
T Consensus 359 ~Vv~dPPr~--g~-----~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 359 KVLLDPARA--GA-----AGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp EEEECCCTT--CC-----HHHHHHHH-HHCCSEEEEEE
T ss_pred EEEECCCCc--cH-----HHHHHHHH-hcCCCeEEEEE
Confidence 999875431 11 24566555 37898887763
No 241
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.87 E-value=8.4e-09 Score=103.09 Aligned_cols=99 Identities=13% Similarity=0.226 Sum_probs=78.1
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||+|||+|.++..+++.. .+|++||+++.+++.|++++...+. . ++++.+|+.+++. .+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ngl----~-v~~~~~d~~~~~~----~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINNV----D-AEFEVASDREVSV----KGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTC----C-EEEEECCTTTCCC----TTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECChHHcCc----cCCCEE
Confidence 456799999999999999999873 6899999999999999999876522 3 9999999988742 279999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++|.+.. + ....+++.+. .|+|+|++++..
T Consensus 358 v~dPPr~-g-----~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 358 IVDPPRA-G-----LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp EECCCTT-C-----SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EEcCCcc-c-----hHHHHHHHHH-hcCCCcEEEEEC
Confidence 9876421 1 1234666665 599999988754
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.87 E-value=4.5e-09 Score=101.80 Aligned_cols=103 Identities=19% Similarity=0.229 Sum_probs=74.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+...+|||||||+|..+..+++..+..+++++|+ +.++. ++....... .++++++.+|+.+ ..+ +||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~---~~~v~~~~~d~~~---~~p--~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV---AGRWKVVEGDFLR---EVP--HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG---TTSEEEEECCTTT---CCC--CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC---CCCeEEEecCCCC---CCC--CCcEE
Confidence 4567999999999999999999877789999999 55555 444332211 4689999999863 233 79999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....++++++++|+|||.+++.
T Consensus 252 ~~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 252 VLKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 975432222211 1247899999999999998763
No 243
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.84 E-value=1e-08 Score=99.70 Aligned_cols=105 Identities=19% Similarity=0.209 Sum_probs=80.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
...++|||||||+|..+..+++..|..++++.|+ |.+++.++++++.. ..+||+++.+|.++- +...+|+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~~----~~~~~D~~ 248 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFKD----PLPEADLY 248 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTTS----CCCCCSEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCccccC----CCCCceEE
Confidence 3467999999999999999999888889999998 89999999987643 247999999997642 23468999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++-..-...+.. ....++++++++|+|||.+++.
T Consensus 249 ~~~~vlh~~~d~--~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 249 ILARVLHDWADG--KCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred EeeeecccCCHH--HHHHHHHHHHhhCCCCCEEEEE
Confidence 964433222221 1246899999999999987753
No 244
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.83 E-value=3.9e-09 Score=99.58 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=75.0
Q ss_pred CCCEEEEEeCcccH----HHHHHHhcCC----CcEEEEEECCHHHHHHHHhhchh-hc--------------------CC
Q 017607 142 SPKTVLVVGGGDGG----VLREISRHDS----VELIDICEIDKMVIDVSKKYFPE-LA--------------------VG 192 (369)
Q Consensus 142 ~p~~VLdIG~G~G~----~~~~l~k~~~----~~~V~~VEid~~vi~~ar~~~~~-~~--------------------~~ 192 (369)
.+.+||++|||+|. ++..+++..+ ..+|+++|||+.+++.|++..-. .. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 5555665522 24899999999999999986410 00 00
Q ss_pred -C--C---CCCEEEEEcchHHHHhhCC-CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 193 -F--E---DPRVRLHIGDAVEFLRQVP-RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 193 -~--~---~~rv~v~~~Da~~~l~~~~-~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
+ . ..+|++...|..+. ..+ .++||+|++-.. ......-....+++.++++|+|||+|++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnv--liyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNV--MIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSS--GGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCc--hHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 0 03699999998762 112 368999997321 11111112357899999999999999873
No 245
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.83 E-value=1.8e-08 Score=95.21 Aligned_cols=86 Identities=19% Similarity=0.364 Sum_probs=66.1
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
...++..+.. ....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++...+. .++++++.+|+.+
T Consensus 17 ~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 17 INSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPV---ASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEESCTTT
T ss_pred HHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEcceec
Confidence 3445554432 356799999999999999999884 5899999999999999998753311 2579999999876
Q ss_pred HHhhCCCCCccEEEEcCC
Q 017607 208 FLRQVPRGKYDAIIVDSS 225 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~ 225 (369)
+ .. ..||+|+++.+
T Consensus 89 ~--~~--~~fD~vv~nlp 102 (285)
T 1zq9_A 89 T--DL--PFFDTCVANLP 102 (285)
T ss_dssp S--CC--CCCSEEEEECC
T ss_pred c--cc--hhhcEEEEecC
Confidence 4 22 37999998764
No 246
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.82 E-value=2.6e-08 Score=93.79 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=81.2
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcc--cHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGD--GGVLREISR-HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 205 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~--G~~~~~l~k-~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da 205 (369)
+..+.+++. ....++|||||||. +..+.+++. ..+..+|++||+|+.|++.||+.+... ...+++++.+|+
T Consensus 67 ~rav~~l~~--~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~ 140 (277)
T 3giw_A 67 NRAVAHLAK--EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHH--TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCT
T ss_pred HHHHHHhcc--ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecc
Confidence 444454432 12457999999997 445566554 456789999999999999999987642 124799999999
Q ss_pred HHHHh--hCC--CCCcc-----EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 206 VEFLR--QVP--RGKYD-----AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 206 ~~~l~--~~~--~~~fD-----vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.+.-. ..+ .+.|| +|++....++-+... --...++.+.+.|+|||+|++..
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-DAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG-CHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchh-hHHHHHHHHHHhCCCCcEEEEEe
Confidence 87521 100 13455 466555443333210 01468999999999999998753
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.80 E-value=7.4e-09 Score=101.30 Aligned_cols=98 Identities=21% Similarity=0.136 Sum_probs=74.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+. .++ . |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~p~-~-D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---VPK-G-DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCC-C-SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---CCC-C-CEE
Confidence 3567999999999999999999877789999999 888876653 25899999998762 333 3 999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-+..+.. ....++++++++|+|||.+++.
T Consensus 266 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 266 FIKWICHDWSDE--HCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEESCGGGBCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 975433211211 1246899999999999988763
No 248
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.78 E-value=1.2e-08 Score=100.71 Aligned_cols=113 Identities=18% Similarity=0.203 Sum_probs=80.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS--------------------------------------VELIDICEIDKMVIDVS 182 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~--------------------------------------~~~V~~VEid~~vi~~a 182 (369)
....+|||+|||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3457899999999999999876521 14799999999999999
Q ss_pred HhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccC--CceEEecccc
Q 017607 183 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMAES 259 (369)
Q Consensus 183 r~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkp--gGilv~~~~s 259 (369)
++++...+. +.++++..+|+.++.. +++||+||+|.+-.......-.-..+|+.+.+.|++ ||.+.+.+.+
T Consensus 274 r~Na~~~gl---~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 274 RENAEIAGV---DEYIEFNVGDATQFKS---EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHTC---GGGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHcCC---CCceEEEECChhhcCc---CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 999876532 2479999999988632 358999998765322111111124577777777776 7776654444
No 249
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.78 E-value=1.1e-08 Score=99.91 Aligned_cols=98 Identities=22% Similarity=0.183 Sum_probs=74.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+. .++ . |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~---~p~-~-D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE---VPS-G-DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCC-C-SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC---CCC-C-CEE
Confidence 3567999999999999999999877789999999 888876653 25899999998762 333 3 999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-+..+.. ....++++++++|+|||.+++.
T Consensus 264 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 264 LMKWILHDWSDQ--HCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred EehHHhccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 975433222211 1246899999999999988763
No 250
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.76 E-value=7.7e-09 Score=101.07 Aligned_cols=98 Identities=23% Similarity=0.221 Sum_probs=75.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++. ++++++.+|+.+. .+ . ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~-~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VP-Q-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CC-C-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CC-C-CCEE
Confidence 4568999999999999999999877778999999 9998876541 4699999998762 22 3 9999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 272 ~~~~~lh~~~d~--~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 272 ILKAVCHNWSDE--KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecccccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 975432221211 1237899999999999988764
No 251
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.76 E-value=6.8e-08 Score=92.09 Aligned_cols=148 Identities=18% Similarity=0.149 Sum_probs=94.2
Q ss_pred CCEEEEEeCcccHHHHHHH----hcCCCcEE--EEEECCHH---------HHHHHHhhchhhcCCCCCCC--EEEEEcch
Q 017607 143 PKTVLVVGGGDGGVLREIS----RHDSVELI--DICEIDKM---------VIDVSKKYFPELAVGFEDPR--VRLHIGDA 205 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~----k~~~~~~V--~~VEid~~---------vi~~ar~~~~~~~~~~~~~r--v~v~~~Da 205 (369)
.-+||++|.|+|....... +..+..++ +.+|.++- .-++.+..+.... .+.+.+ ++++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p-~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP-EYEGERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS-EEECSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc-cccCCcEEEEEEechH
Confidence 3479999999998765433 33444444 45554321 1112221111110 112334 57889999
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEE
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYA 285 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~ 285 (369)
.+.+++....++|+|+.|.+.|... +.|++.++|+.++++++|||++++.+.. ..+.+.|+++ .+.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kN-PeLWs~e~f~~l~~~~~pgg~laTYtaa--------g~VRR~L~~a-----GF~ 241 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKN-PELWTLDFLSLIKERIDEKGYWVSYSSS--------LSVRKSLLTL-----GFK 241 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTS-GGGGSHHHHHHHHTTEEEEEEEEESCCC--------HHHHHHHHHT-----TCE
T ss_pred HHHHhhhcccceeEEEeCCCCcccC-cccCCHHHHHHHHHHhCCCcEEEEEeCc--------HHHHHHHHHC-----CCE
Confidence 9999876555899999999988665 3599999999999999999999986643 2333445544 222
Q ss_pred EEEEeeccCCcEEEEEeecCC
Q 017607 286 WASVPTYPSGIIGFLICSTEG 306 (369)
Q Consensus 286 ~~~vP~~p~g~w~f~~ask~~ 306 (369)
...+|-|+ +..-.+.|++..
T Consensus 242 V~k~~G~g-~KReml~A~~~~ 261 (308)
T 3vyw_A 242 VGSSREIG-RKRKGTVASLKA 261 (308)
T ss_dssp EEEEECC----CEEEEEESSS
T ss_pred EEecCCCC-CCCceeEEecCC
Confidence 35678774 567788888753
No 252
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.76 E-value=1.1e-08 Score=99.02 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=74.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++. ++++++.+|+.+. .+ .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~p--~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---IP--NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---CC--CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---CC--CccEE
Confidence 3567999999999999999998876779999999 9999877652 3599999998652 22 39999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccC---CceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRP---GGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~Lkp---gGilv~~ 256 (369)
++...-...+. .....++++++++|+| ||.+++.
T Consensus 251 ~~~~~lh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 251 LLKYILHNWTD--KDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred EeehhhccCCH--HHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 97543221111 1123789999999999 9988754
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=1.6e-08 Score=99.99 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=79.8
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCC--------------------------------------cEEEEEECCHHHHHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSV--------------------------------------ELIDICEIDKMVIDVS 182 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~--------------------------------------~~V~~VEid~~vi~~a 182 (369)
.....|||.+||+|+++.+++..... .+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 34568999999999999998864221 4699999999999999
Q ss_pred HhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccC--CceEEeccc
Q 017607 183 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMAE 258 (369)
Q Consensus 183 r~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkp--gGilv~~~~ 258 (369)
++++...+. +.+++++.+|+.++.. +++||+||+|.+-.......-...++|+.+.+.|++ ||.+.+.+.
T Consensus 280 r~Na~~~gl---~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 280 KQNAVEAGL---GDLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHTTC---TTCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHcCC---CCceEEEECChHhCCC---CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999876532 3479999999988632 358999998765322211111123567777777766 887765444
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.76 E-value=3e-08 Score=97.86 Aligned_cols=112 Identities=12% Similarity=0.105 Sum_probs=81.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCC--------------------------------------cEEEEEECCHHHHHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSV--------------------------------------ELIDICEIDKMVIDVS 182 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~--------------------------------------~~V~~VEid~~vi~~a 182 (369)
.....|||.+||+|+++.+++..... .+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 34568999999999999998864221 4699999999999999
Q ss_pred HhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccC--CceEEeccc
Q 017607 183 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMAE 258 (369)
Q Consensus 183 r~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkp--gGilv~~~~ 258 (369)
+++....+. ..+++++.+|+.++.. .++||+||+|.+-.......--..++|+.+.+.|++ ||.+.+.+.
T Consensus 273 r~Na~~~gl---~~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVGL---EDVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTTC---TTTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcCC---CCceEEEECChHHCCc---cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 999876532 3479999999988632 358999998775433222111234578888888876 887765443
No 255
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.75 E-value=1.4e-08 Score=93.65 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=76.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... ..+.++.+.|...- ...++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~---~~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA---PPAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS---CCCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC---CCCCCcchH
Confidence 568899999999999998877 5679999999999999999997765 46789999997653 235689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
++-..-|. .+..-....+ .+.+.|+++|++|.
T Consensus 173 Lllk~lh~--LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 173 LIFKLLPL--LEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp EEESCHHH--HHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HHHHHHHH--hhhhchhhHH-HHHHHhcCCCEEEE
Confidence 86433221 1111122344 77779999999885
No 256
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.75 E-value=1.3e-08 Score=91.09 Aligned_cols=126 Identities=17% Similarity=0.227 Sum_probs=81.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+.+|||||||+|..+..++ .+|+++|+++. +++++.+|+.+. ..++++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~--~~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQV--PLEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSC--SCCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccC--CCCCCCEeEE
Confidence 356799999999999988773 57999999977 245677787653 2335689999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHH-CCCCeeEEEEEEeeccCCcEEE
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGF 299 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~~p~g~w~f 299 (369)
++...-.. .....+++.+.++|+|||.+++....... .....+.+.+++. |. . ..+. +..+.|.+
T Consensus 120 ~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~~~~~--~~~~~~~~~l~~~Gf~-~-----~~~~-~~~~~~~~ 185 (215)
T 2zfu_A 120 VFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEVSSRF--EDVRTFLRAVTKLGFK-I-----VSKD-LTNSHFFL 185 (215)
T ss_dssp EEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEECGGGC--SCHHHHHHHHHHTTEE-E-----EEEE-CCSTTCEE
T ss_pred EEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEcCCCC--CCHHHHHHHHHHCCCE-E-----EEEe-cCCCeEEE
Confidence 97544321 12357899999999999998874322111 1234444445443 43 2 2222 23356777
Q ss_pred EEeecCC
Q 017607 300 LICSTEG 306 (369)
Q Consensus 300 ~~ask~~ 306 (369)
+.+.|..
T Consensus 186 ~~~~k~~ 192 (215)
T 2zfu_A 186 FDFQKTG 192 (215)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 7777763
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.75 E-value=2.4e-08 Score=103.33 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=64.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..|.+|||||||+|.++..+++.+ .+|++||+++.+++.||.+....+ ..++++.++|+.+......+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhccCCCccEE
Confidence 467899999999999999999985 689999999999999999876531 24699999999988765556789999
Q ss_pred EE
Q 017607 221 IV 222 (369)
Q Consensus 221 i~ 222 (369)
++
T Consensus 139 ~~ 140 (569)
T 4azs_A 139 IG 140 (569)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.74 E-value=3.4e-08 Score=93.79 Aligned_cols=109 Identities=21% Similarity=0.293 Sum_probs=71.9
Q ss_pred hHHHHHHHhcc--ccCCCCCCEEEEEeCc------ccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCC
Q 017607 126 CAYQEMIAHLP--LCSIPSPKTVLVVGGG------DGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDP 196 (369)
Q Consensus 126 ~~Y~e~l~~~~--l~~~~~p~~VLdIG~G------~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~ 196 (369)
..|.++...+. ....++..+||||||| .|. ..+++. ++..+|++||+++. + +
T Consensus 45 ~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~ 105 (290)
T 2xyq_A 45 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------S 105 (290)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------C
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------C
Confidence 34666655441 1223456799999994 476 334444 33579999999988 1 2
Q ss_pred CEEE-EEcchHHHHhhCCCCCccEEEEcCCCCCC------Cc-cccccHHHHHHHHHhccCCceEEec
Q 017607 197 RVRL-HIGDAVEFLRQVPRGKYDAIIVDSSDPVG------PA-QELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 197 rv~v-~~~Da~~~l~~~~~~~fDvIi~D~~~p~~------~~-~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++++ +++|+.+.. . .++||+|++|...+.. .. ...+...+++.+.++|+|||.|++.
T Consensus 106 ~v~~~i~gD~~~~~--~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 106 DADSTLIGDCATVH--T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp SSSEEEESCGGGCC--C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEECccccCC--c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5778 999987642 1 3579999998653321 00 0112247899999999999999974
No 259
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.73 E-value=5.6e-08 Score=92.83 Aligned_cols=90 Identities=27% Similarity=0.296 Sum_probs=70.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 128 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 128 Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
+.+++..+.. ....+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++... ..+++++.+|+.+
T Consensus 15 l~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-----g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-----SDRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-----TTTEEEEECCGGG
T ss_pred HHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCHHH
Confidence 4566665532 3457999999999999999998865679999999999999999998754 2589999999876
Q ss_pred H---HhhCCCCCccEEEEcCC
Q 017607 208 F---LRQVPRGKYDAIIVDSS 225 (369)
Q Consensus 208 ~---l~~~~~~~fDvIi~D~~ 225 (369)
+ +......+||.|++|..
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 4 22221257999998863
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.72 E-value=4.5e-08 Score=93.79 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=82.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fD 218 (369)
....+|||+|||.|+.+..+++. .+..+|+++|+++..++.+++++...+. .+++++.+|+.++..... .++||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~----~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV----SCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CeEEEEeCChHhcCccccccCCCC
Confidence 34679999999999999999875 3457999999999999999999876632 479999999987643211 14799
Q ss_pred EEEEcCCCC-CCC----cc----------c-----cccHHHHHHHHHhccCCceEEeccccc
Q 017607 219 AIIVDSSDP-VGP----AQ----------E-----LVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 219 vIi~D~~~p-~~~----~~----------~-----L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
+|++|.+.. .+. +. . -...++++.+.+.|+ ||.|+..+.+.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 999997541 111 00 0 012356777777776 99888655553
No 261
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.71 E-value=3.2e-08 Score=94.24 Aligned_cols=74 Identities=19% Similarity=0.311 Sum_probs=61.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
...+|||||||+|.++..+++. ..+|++||+|+.+++.+++++.. .++++++.+|+.++- .++..||+|+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~--~~~~~fD~Iv 119 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD--LNKLDFNKVV 119 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC--GGGSCCSEEE
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC--cccCCccEEE
Confidence 5679999999999999999988 36899999999999999998762 368999999998752 2234699999
Q ss_pred EcCC
Q 017607 222 VDSS 225 (369)
Q Consensus 222 ~D~~ 225 (369)
.+.+
T Consensus 120 ~NlP 123 (295)
T 3gru_A 120 ANLP 123 (295)
T ss_dssp EECC
T ss_pred EeCc
Confidence 7653
No 262
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.69 E-value=1.8e-08 Score=100.04 Aligned_cols=80 Identities=20% Similarity=0.134 Sum_probs=65.7
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
..+|||+|||+|..+..+++.. .+|++||+|+.+++.|++++.....++ .+++++.+|+.+++.....++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 6799999999999999998874 699999999999999999987651112 479999999998875422247999999
Q ss_pred cCCC
Q 017607 223 DSSD 226 (369)
Q Consensus 223 D~~~ 226 (369)
|.+-
T Consensus 170 DPPr 173 (410)
T 3ll7_A 170 DPAR 173 (410)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 8653
No 263
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.69 E-value=1.3e-08 Score=95.06 Aligned_cols=80 Identities=20% Similarity=0.153 Sum_probs=64.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCH-------HHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDK-------MVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR 214 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~-------~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~ 214 (369)
...+|||+|||+|..+..+++.. .+|+++|+++ .+++.|+++....+. ..+++++.+|+.+++...++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEECCHHHHHHhhhc
Confidence 45689999999999999999873 5899999999 999999887654422 24699999999998764432
Q ss_pred --CCccEEEEcCCC
Q 017607 215 --GKYDAIIVDSSD 226 (369)
Q Consensus 215 --~~fDvIi~D~~~ 226 (369)
++||+|++|...
T Consensus 158 ~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 158 TQGKPDIVYLDPMY 171 (258)
T ss_dssp HHCCCSEEEECCCC
T ss_pred cCCCccEEEECCCC
Confidence 589999988654
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.69 E-value=3.4e-08 Score=99.03 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=80.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-------------CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-------------SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-------------~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
...+|||.|||+|+++..++++. ...+++++|+|+.++++|+.++...+ ....+++++.+|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g--~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG--IGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT--CCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC--CCcCCCCEeeCCCCCC
Confidence 34589999999999999988752 23579999999999999999875442 2222678999997764
Q ss_pred HhhCCCCCccEEEEcCCCCCCCc-c-c-----------cccHHHHHHHHHhccCCceEEecccc
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPA-Q-E-----------LVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~-~-~-----------L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
. ..++||+|+.+.+-..... . . -....|++.+.+.|+|||.+++...+
T Consensus 249 ~---~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 249 E---PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp C---CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred c---ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 2 2348999998754321110 0 0 00147999999999999998765533
No 265
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.67 E-value=3.7e-08 Score=93.74 Aligned_cols=75 Identities=21% Similarity=0.221 Sum_probs=58.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++...+ .++++++.+|+.++ +..+||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~----~~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKT----VFPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSS----CCCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhC----CcccCCEE
Confidence 356799999999999999999873 689999999999999999875431 25799999998765 22479999
Q ss_pred EEcCC
Q 017607 221 IVDSS 225 (369)
Q Consensus 221 i~D~~ 225 (369)
+++.+
T Consensus 111 v~n~p 115 (299)
T 2h1r_A 111 TANIP 115 (299)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 98764
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.64 E-value=9.8e-08 Score=88.97 Aligned_cols=74 Identities=16% Similarity=0.341 Sum_probs=59.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH-HhhCC-CCCccE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF-LRQVP-RGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l~~~~-~~~fDv 219 (369)
...+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++ +.... +++||
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~- 99 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR- 99 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE-
T ss_pred CcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE-
Confidence 46789999999999999999874 6899999999999999998753 36899999999876 32221 34688
Q ss_pred EEEcC
Q 017607 220 IIVDS 224 (369)
Q Consensus 220 Ii~D~ 224 (369)
||.+.
T Consensus 100 vv~Nl 104 (255)
T 3tqs_A 100 VVGNL 104 (255)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 66554
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.59 E-value=6e-08 Score=94.14 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=73.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ ..+ .||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~~--~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SIP--SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CCC--CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CCC--CceEEE
Confidence 467999999999999999999877779999999 788876554 1459999999876 222 499999
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccC---CceEEe
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRP---GGVLCN 255 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~Lkp---gGilv~ 255 (369)
+...-...+.. ....++++++++|+| ||.+++
T Consensus 257 ~~~vlh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 257 LKWVLHDWNDE--QSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred EcccccCCCHH--HHHHHHHHHHHhCCCCCCCcEEEE
Confidence 75432222211 123789999999999 998775
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.58 E-value=2.2e-07 Score=87.33 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=59.6
Q ss_pred EEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcC
Q 017607 145 TVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDS 224 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 224 (369)
+|||||||+|.++..+++.. .+|++||+|+.+++.++++++ +.+++++.+|+.++--.. ...+|.|+.+.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~-~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEE-VPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGG-SCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhh-ccCccEEEecC
Confidence 99999999999999999985 689999999999999999875 258999999998762111 12689999766
Q ss_pred CC
Q 017607 225 SD 226 (369)
Q Consensus 225 ~~ 226 (369)
+.
T Consensus 119 Py 120 (271)
T 3fut_A 119 PY 120 (271)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 269
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.55 E-value=1.4e-07 Score=89.09 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=84.2
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC-----CCcEEEEEECCHH--------------------------HHHHHHhhchhh
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKM--------------------------VIDVSKKYFPEL 189 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~-----~~~~V~~VEid~~--------------------------vi~~ar~~~~~~ 189 (369)
..|++||+||+..|..+..++... +..+|+++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 458899999999999998876531 3578999996421 366788888765
Q ss_pred cCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 190 AVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 190 ~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
++..++++++.||+.+.+...+.++||+|.+|+. .+ ..+..+++.+...|+|||++++.-
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LY----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC--SH----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC--cc----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 3334789999999999987765578999999973 11 124678999999999999999743
No 270
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.54 E-value=4.1e-09 Score=97.17 Aligned_cols=117 Identities=18% Similarity=0.314 Sum_probs=79.1
Q ss_pred HHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 127 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 127 ~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
.+..++..+.. ....+|||||||+|.++..+++.. .+|+++|+|+.+++.+++++.. .++++++.+|+.
T Consensus 17 ~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~ 85 (245)
T 1yub_A 17 VLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDIL 85 (245)
T ss_dssp THHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCT
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChh
Confidence 34555554432 345689999999999999999885 6899999999999998887641 368999999988
Q ss_pred HHHhhCC-CCCccEEEEcCCCCCCCcc-------ccccHHHH----HHHHHhccCCceEEecc
Q 017607 207 EFLRQVP-RGKYDAIIVDSSDPVGPAQ-------ELVEKPFF----DTIAKALRPGGVLCNMA 257 (369)
Q Consensus 207 ~~l~~~~-~~~fDvIi~D~~~p~~~~~-------~L~~~ef~----~~~~~~LkpgGilv~~~ 257 (369)
++- .+ +++| .|+++.+....... ......++ +.+.+.|+|||.+++..
T Consensus 86 ~~~--~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 86 QFQ--FPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTT--CCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred hcC--cccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 752 22 2578 67766543221100 00111223 56788888888876543
No 271
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.54 E-value=8.9e-08 Score=82.95 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=66.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDv 219 (369)
....+||+||||. +.+|+++.|++.|++.++ .+++++.+|+.+.... .++++||+
T Consensus 11 ~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEeE
Confidence 4678999999985 139999999999998864 2489999998875321 14578999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|++........ .. ...++++++++|||||.+++.
T Consensus 67 V~~~~~l~~~~-~~--~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 67 ILSGLVPGSTT-LH--SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEECCSTTCCC-CC--CHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECChhhhcc-cC--HHHHHHHHHHHCCCCEEEEEE
Confidence 99754332220 11 367999999999999999874
No 272
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.54 E-value=1.1e-06 Score=85.85 Aligned_cols=135 Identities=14% Similarity=0.179 Sum_probs=96.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCC--CCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG--FEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~--~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
....+|||+++|.|+=+..++.......|+++|+++.-++..++++...... ....++.+...|+..+-... .++||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCC
Confidence 3456999999999999999988766678999999999999999887665321 12357999999999875443 46899
Q ss_pred EEEEcCCCCC---C---Cccc--------------cccHHHHHHHHHhccCCceEEecccccch--hhhHHHHHHHHHHH
Q 017607 219 AIIVDSSDPV---G---PAQE--------------LVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRE 276 (369)
Q Consensus 219 vIi~D~~~p~---~---~~~~--------------L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~~~~~~i~~~l~~ 276 (369)
.|++|++... + .... -...++++.+.+.|||||+||-.+.|... ....+..+++....
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 9999986422 1 0000 12357888999999999999866655432 33455555555443
No 273
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.52 E-value=6.2e-07 Score=82.66 Aligned_cols=73 Identities=16% Similarity=0.336 Sum_probs=58.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCccE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDv 219 (369)
....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++- .+ ...| .
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~--~~~~~~~-~ 97 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFK--FPKNQSY-K 97 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCC--CCSSCCC-E
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCC--cccCCCe-E
Confidence 356799999999999999999885 6899999999999999998753 258999999988752 22 2345 4
Q ss_pred EEEcC
Q 017607 220 IIVDS 224 (369)
Q Consensus 220 Ii~D~ 224 (369)
|+.+.
T Consensus 98 vv~nl 102 (244)
T 1qam_A 98 IFGNI 102 (244)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66554
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.51 E-value=9.9e-08 Score=89.14 Aligned_cols=100 Identities=10% Similarity=0.078 Sum_probs=70.3
Q ss_pred CEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC--CCCC---CCEEEEEcchHHHHhhCCCCCcc
Q 017607 144 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV--GFED---PRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~--~~~~---~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.+|||+|||.|..+.++++.. .+|++||+++.+++++++.+..... ...+ .+++++.+|+.++++..+ ++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~-~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT-PRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS-SCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc-ccCC
Confidence 689999999999999999874 4799999999998888877643311 1111 479999999999987654 4799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGG 251 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgG 251 (369)
+|++|...+... ....++...+.|++.+
T Consensus 167 vV~lDP~y~~~~-----~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMFPHKQ-----KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCCCCCC-----C-----HHHHHHHHHS
T ss_pred EEEEcCCCCCcc-----cchHHHHHHHHHHHhh
Confidence 999987654432 1123444445555533
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.49 E-value=1.2e-07 Score=97.60 Aligned_cols=135 Identities=11% Similarity=0.014 Sum_probs=89.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCC---------------CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDS---------------VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 205 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~---------------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da 205 (369)
+.+.+|||.+||+|+++..++++.. ..++.++|+|+.++++|+.++...+. +.++.+..+|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI---DFNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC---CCBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC---Ccccceeccch
Confidence 3445999999999999988765311 35899999999999999998765422 23455578886
Q ss_pred HHHHhhCCCCCccEEEEcCCCCCC---C----------------------ccccccHHHHHHHHHhccCCceEEeccccc
Q 017607 206 VEFLRQVPRGKYDAIIVDSSDPVG---P----------------------AQELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 206 ~~~l~~~~~~~fDvIi~D~~~p~~---~----------------------~~~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
+..- .....+||+||.+++-... . +..-....|++.+.+.|+|||.+++...+.
T Consensus 320 L~~~-~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 320 FLDD-QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTSC-SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hcCc-ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 6431 1224689999987654321 0 000011369999999999999987665544
Q ss_pred chhh--hHHHHHHHHHHHHCC
Q 017607 261 WLHT--HLIEDMISICRETFK 279 (369)
Q Consensus 261 ~~~~--~~~~~i~~~l~~~F~ 279 (369)
++.. .....+.+.+-+.+.
T Consensus 399 ~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHTTC
T ss_pred hhhcCcchHHHHHHHHHhCCc
Confidence 4332 245566666665543
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.49 E-value=2e-07 Score=98.76 Aligned_cols=116 Identities=14% Similarity=0.141 Sum_probs=78.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcC------------------------------------------CCcEEEEEECCHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHD------------------------------------------SVELIDICEIDKMV 178 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~------------------------------------------~~~~V~~VEid~~v 178 (369)
+....|||.+||+|+++.+++... +..+|+++|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 345689999999999999987641 12479999999999
Q ss_pred HHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHh---ccCCceEEe
Q 017607 179 IDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA---LRPGGVLCN 255 (369)
Q Consensus 179 i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~---LkpgGilv~ 255 (369)
++.|++++...+. +..+++..+|+.++......++||+||++.+-.......-.-.++|+.+.+. +.|||.+.+
T Consensus 269 v~~A~~N~~~agv---~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 269 IQRARTNARLAGI---GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHTTC---GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHcCC---CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 9999999876533 3469999999988532222237999998765422111111123455555444 457998876
Q ss_pred cccc
Q 017607 256 MAES 259 (369)
Q Consensus 256 ~~~s 259 (369)
.+.+
T Consensus 346 lt~~ 349 (703)
T 3v97_A 346 FSAS 349 (703)
T ss_dssp EESC
T ss_pred EeCC
Confidence 5543
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.46 E-value=6.9e-07 Score=82.82 Aligned_cols=73 Identities=22% Similarity=0.402 Sum_probs=57.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH-HhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF-LRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l~~~~~~~fDvI 220 (369)
...+|||||||+|.++..+++.+ ..+|++||+|+.+++.++++ . ..+++++.+|+.++ +.+.. +.| .|
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~-~~~-~v 99 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLG-KEL-KV 99 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSC-SSE-EE
T ss_pred CcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHcc-CCc-EE
Confidence 56799999999999999999883 47999999999999999887 3 35899999999875 22221 234 67
Q ss_pred EEcCC
Q 017607 221 IVDSS 225 (369)
Q Consensus 221 i~D~~ 225 (369)
+.+.+
T Consensus 100 v~NlP 104 (249)
T 3ftd_A 100 VGNLP 104 (249)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 76553
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.44 E-value=1.5e-06 Score=89.38 Aligned_cols=136 Identities=13% Similarity=0.046 Sum_probs=92.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH-hhCCCCCc
Q 017607 142 SPKTVLVVGGGDGGVLREISRH---DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL-RQVPRGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~---~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l-~~~~~~~f 217 (369)
...+|||.+||+|+++..++++ ....++.++|+++.++++|+.++... +...+++++..+|.+..- ......+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH--GVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc--CCCcCccceEecceecccccccccccc
Confidence 4569999999999999988876 23568999999999999999987544 222357899999976530 11234689
Q ss_pred cEEEEcCCCCCCC--ccc-----------------cccHHHHHHHHHhcc-CCceEEecccccchh-hhHHHHHHHHHHH
Q 017607 218 DAIIVDSSDPVGP--AQE-----------------LVEKPFFDTIAKALR-PGGVLCNMAESMWLH-THLIEDMISICRE 276 (369)
Q Consensus 218 DvIi~D~~~p~~~--~~~-----------------L~~~ef~~~~~~~Lk-pgGilv~~~~s~~~~-~~~~~~i~~~l~~ 276 (369)
|+||.+++-.... ... -....|++.+.+.|+ |||.+++...+.++. ......+.+.+-+
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle 378 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLE 378 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHh
Confidence 9999876532110 000 001358999999999 999987665554542 2234556666555
Q ss_pred HCC
Q 017607 277 TFK 279 (369)
Q Consensus 277 ~F~ 279 (369)
.+.
T Consensus 379 ~~~ 381 (542)
T 3lkd_A 379 EGA 381 (542)
T ss_dssp TTC
T ss_pred CCc
Confidence 443
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.41 E-value=4.5e-07 Score=93.26 Aligned_cols=134 Identities=13% Similarity=0.048 Sum_probs=88.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC---C---------------CcEEEEEECCHHHHHHHHhhchhhcCCCCC---CCEEE
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD---S---------------VELIDICEIDKMVIDVSKKYFPELAVGFED---PRVRL 200 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~---~---------------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~---~rv~v 200 (369)
...+|||.+||+|+++..++++. . ..+++++|+|+.++++|+.++...+. .. .++++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi--~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI--EGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC--CCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC--CccccccCCe
Confidence 34689999999999998887641 0 13799999999999999988654322 11 13789
Q ss_pred EEcchHHHHhhCCCCCccEEEEcCCCCCCCcc----------ccccHHHHHHHHHhccCCceEEecccccchh-hhHHHH
Q 017607 201 HIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQ----------ELVEKPFFDTIAKALRPGGVLCNMAESMWLH-THLIED 269 (369)
Q Consensus 201 ~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~----------~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~-~~~~~~ 269 (369)
+.+|.+..... ..++||+|+.+++....... .-....|++.+.+.|+|||.+++...+.++. ......
T Consensus 247 ~~gDtL~~~~~-~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~ 325 (541)
T 2ar0_A 247 RLGNTLGSDGE-NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTD 325 (541)
T ss_dssp EESCTTSHHHH-TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHH
T ss_pred EeCCCcccccc-cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHH
Confidence 99998764322 23589999987643221110 0112369999999999999988665444332 223344
Q ss_pred HHHHHHHHC
Q 017607 270 MISICRETF 278 (369)
Q Consensus 270 i~~~l~~~F 278 (369)
+.+.+.+.+
T Consensus 326 iR~~L~~~~ 334 (541)
T 2ar0_A 326 IRRDLMDKC 334 (541)
T ss_dssp HHHHHHHHE
T ss_pred HHHHHhhcC
Confidence 555555443
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.35 E-value=9.4e-07 Score=93.70 Aligned_cols=137 Identities=11% Similarity=0.130 Sum_probs=87.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCC---CcEEEEEECCHHHHHHH--HhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDS---VELIDICEIDKMVIDVS--KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~---~~~V~~VEid~~vi~~a--r~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~ 216 (369)
...+|||.|||+|+++.+++++.+ ..+++++|||+.+++.| +.++.............+..+|....- .....+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~-~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN-PEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC-GGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc-ccccCC
Confidence 467999999999999999987643 35799999999999999 554432111001122456666765521 112357
Q ss_pred ccEEEEcCCCCCC-C-ccc-----------------------cccHHHHHHHHHhccCCceEEecccccchh--hhHHHH
Q 017607 217 YDAIIVDSSDPVG-P-AQE-----------------------LVEKPFFDTIAKALRPGGVLCNMAESMWLH--THLIED 269 (369)
Q Consensus 217 fDvIi~D~~~p~~-~-~~~-----------------------L~~~ef~~~~~~~LkpgGilv~~~~s~~~~--~~~~~~ 269 (369)
||+||.+++-... . ... -....|++.+.+.|+|||.+++...+.|.. ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 9999987654211 0 000 013458899999999999998776666653 223445
Q ss_pred HHHHHHHHCC
Q 017607 270 MISICRETFK 279 (369)
Q Consensus 270 i~~~l~~~F~ 279 (369)
+.+.+.+.+.
T Consensus 480 LRk~LLe~~~ 489 (878)
T 3s1s_A 480 FREFLVGNFG 489 (878)
T ss_dssp HHHHHTTTTC
T ss_pred HHHHHHhCCC
Confidence 5555444443
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.34 E-value=7.6e-07 Score=83.32 Aligned_cols=161 Identities=12% Similarity=0.098 Sum_probs=96.9
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
.++... .+ .....+|||||||.|+.+..+++..+..+++++|+...+. .-+.....+ +.++..+.+|+..
T Consensus 64 ~ei~ek-~~--l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~dv- 133 (277)
T 3evf_A 64 RWFHER-GY--VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKTDI- 133 (277)
T ss_dssp HHHHHT-TS--SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSCCT-
T ss_pred HHHHHh-CC--CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEecccee-
Confidence 555554 22 2345689999999999999988876677889998874321 001110001 1134445554311
Q ss_pred HhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCC-ceEEecccccchhhhHHHHHHHHHHHHCCCCeeEE
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFKGSVHYA 285 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~Lkpg-Gilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~ 285 (369)
....+++||+|++|.....+.. ....+...++.+.+.|+|| |.||+-.-.|| ......+++.++..|. .|..
T Consensus 134 -~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~-~V~~- 208 (277)
T 3evf_A 134 -HRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFG-GTVI- 208 (277)
T ss_dssp -TTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHC-CEEE-
T ss_pred -hhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcC-CEEE-
Confidence 1234578999999975543321 1112223468889999999 99997442222 3466788999999999 4543
Q ss_pred EEEEee-ccCCcEEEEEeecCC
Q 017607 286 WASVPT-YPSGIIGFLICSTEG 306 (369)
Q Consensus 286 ~~~vP~-~p~g~w~f~~ask~~ 306 (369)
.-|. =.+..-.|++|....
T Consensus 209 --~KPaSR~~S~E~Y~V~~~r~ 228 (277)
T 3evf_A 209 --RNPLSRNSTHEMYYVSGARS 228 (277)
T ss_dssp --CCTTSCTTCCCEEEESSCCC
T ss_pred --EeCCCCCCCCceEEEEecCC
Confidence 3451 111234677776543
No 282
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.29 E-value=4.9e-06 Score=78.29 Aligned_cols=132 Identities=19% Similarity=0.177 Sum_probs=97.7
Q ss_pred HHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 127 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 127 ~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
.|-.++..+ ++..+||+=+|+|.++.++++. ..+++.||.++..++..++++.. +.+++++..|+.
T Consensus 82 ~yf~~l~~~------n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~ 147 (283)
T 2oo3_A 82 EYISVIKQI------NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGV 147 (283)
T ss_dssp HHHHHHHHH------SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHH
T ss_pred HHHHHHHHh------cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHH
Confidence 466666552 4567999999999999999983 37999999999999999999864 468999999999
Q ss_pred HHHhhC--CCCCccEEEEcCCCCCCCccccccHHHHHHHHH--hccCCceEEecccccchhhhHHHHHHHHHHHHC
Q 017607 207 EFLRQV--PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMAESMWLHTHLIEDMISICRETF 278 (369)
Q Consensus 207 ~~l~~~--~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~--~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F 278 (369)
+.++.. +..+||+|++|.+-... .. ....++.+.+ .+.|+|+++++- |.........+.+.+++.-
T Consensus 148 ~~L~~l~~~~~~fdLVfiDPPYe~k---~~-~~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 148 SKLNALLPPPEKRGLIFIDPSYERK---EE-YKEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp HHHHHHCSCTTSCEEEEECCCCCST---TH-HHHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCccEEEECCCCCCC---cH-HHHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhcC
Confidence 988753 23479999998754321 11 2234444444 567899999864 4555666778888887653
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.27 E-value=2e-06 Score=81.15 Aligned_cols=60 Identities=22% Similarity=0.351 Sum_probs=50.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCC--cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSV--ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~--~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
....+|||||||+|.++..+++.... .+|++||+|+.+++.+++++ . ++++++.+|+.++
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTF 102 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGC
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcC
Confidence 35679999999999999999987421 34999999999999999883 1 4799999999875
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.27 E-value=1.2e-06 Score=81.49 Aligned_cols=86 Identities=10% Similarity=0.191 Sum_probs=59.5
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
..++..+.. ....+|||||||+|.++. +.+ ....+|++||+|+.+++.+++++... ++++++.+|+.++
T Consensus 11 ~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~------~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 11 DSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG------PKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG------GGEEEECSCGGGC
T ss_pred HHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC------CceEEEECchhhC
Confidence 444444432 345689999999999999 654 32223999999999999999987532 5899999999874
Q ss_pred -HhhCC--CCCccEEEEcCC
Q 017607 209 -LRQVP--RGKYDAIIVDSS 225 (369)
Q Consensus 209 -l~~~~--~~~fDvIi~D~~ 225 (369)
+.+.. .+..|.|+.+.+
T Consensus 80 ~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 80 NFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp CHHHHHHHHTSCEEEEEECC
T ss_pred CHHHhhcccCCceEEEECCC
Confidence 22110 023577886653
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.24 E-value=1e-06 Score=82.64 Aligned_cols=161 Identities=13% Similarity=0.059 Sum_probs=96.1
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
.|+.... + .....+|||||||.|+.+..+++..+..+|+++|+.......+. +. ..+ +.++.....+..
T Consensus 80 ~ei~eK~-~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi---~~--~~~-g~~ii~~~~~~d-- 148 (282)
T 3gcz_A 80 RWMEERG-Y--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI---MR--TTL-GWNLIRFKDKTD-- 148 (282)
T ss_dssp HHHHHTT-S--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC---CC--CBT-TGGGEEEECSCC--
T ss_pred HHHHHhc-C--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc---cc--ccC-CCceEEeeCCcc--
Confidence 4555543 2 23456899999999999999887667788999999754311110 00 000 123333332211
Q ss_pred HhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCC--ceEEecccccchhhhHHHHHHHHHHHHCCCCeeE
Q 017607 209 LRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG--GVLCNMAESMWLHTHLIEDMISICRETFKGSVHY 284 (369)
Q Consensus 209 l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~Lkpg--Gilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~ 284 (369)
+...+.+++|+|++|.....+.. ++..+...++.+.+.|+|| |.||+-.-.+| ......+++.++..|. .|..
T Consensus 149 v~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--g~~~~~l~~~lk~~F~-~V~~ 225 (282)
T 3gcz_A 149 VFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--TPLIMEELSRLQLKHG-GGLV 225 (282)
T ss_dssp GGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--SHHHHHHHHHHHHHHC-CEEE
T ss_pred hhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--CccHHHHHHHHHHhcC-CEEE
Confidence 11234578999999976543331 2222234577788999999 99997432222 4566788899999999 4543
Q ss_pred EEEEEee-ccCCcEEEEEeecCC
Q 017607 285 AWASVPT-YPSGIIGFLICSTEG 306 (369)
Q Consensus 285 ~~~~vP~-~p~g~w~f~~ask~~ 306 (369)
.-|. =.+..-.|++|....
T Consensus 226 ---~KPaSR~~S~E~Y~V~~~r~ 245 (282)
T 3gcz_A 226 ---RVPLSRNSTHEMYWVSGTRT 245 (282)
T ss_dssp ---CCTTSCTTCCCEEEETTCCC
T ss_pred ---EcCCCcccCcceeEEEecCC
Confidence 3451 111234677775543
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.23 E-value=8.1e-07 Score=92.57 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=73.3
Q ss_pred CCEEEEEeCcccHHHHHHHhc---C-CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRH---D-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~---~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...|||||+|+|-+....++. . ...+|.+||-++. ...+++....+ ++ +.+|+++.+|.+++ +. +++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N--~~-~dkVtVI~gd~eev--~L-PEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFE--EW-GSQVTVVSSDMREW--VA-PEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHH--TT-GGGEEEEESCTTTC--CC-SSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhc--cC-CCeEEEEeCcceec--cC-CcccC
Confidence 357999999999995554442 2 1227899999985 55667665444 23 45899999999887 33 47899
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||+..-..... .+.. .+.+....+.|||||+++=+.
T Consensus 431 IIVSEwMG~fLl-~E~m-levL~Ardr~LKPgGimiPs~ 467 (637)
T 4gqb_A 431 IIVSELLGSFAD-NELS-PECLDGAQHFLKDDGVSIPGE 467 (637)
T ss_dssp EEECCCCBTTBG-GGCH-HHHHHHHGGGEEEEEEEESCE
T ss_pred EEEEEcCccccc-ccCC-HHHHHHHHHhcCCCcEEcccc
Confidence 999665443222 2222 356777788999999998443
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.20 E-value=1.6e-06 Score=90.61 Aligned_cols=111 Identities=18% Similarity=0.192 Sum_probs=75.2
Q ss_pred CCEEEEEeCcccHHHHHHHhc----C---------CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH
Q 017607 143 PKTVLVVGGGDGGVLREISRH----D---------SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 209 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~----~---------~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l 209 (369)
.+.|||||||+|.+...+++. . ...+|.+||.++..+...++... . ++ +.+|+++.+|++++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-N--g~-~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-R--TW-KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-H--TT-TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-c--CC-CCeEEEEeCchhhcc
Confidence 357999999999996543221 1 23489999999977765554332 2 23 357999999999873
Q ss_pred h---hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 210 R---QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 210 ~---~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
. ....++.|+||+..-.-.+ ..++ ..+.+..+.+.|+|||+++=+...
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl-~nEL-~pe~Ld~v~r~Lkp~Gi~iP~~~t 536 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFG-DNEL-SPECLDGVTGFLKPTTISIPQKYT 536 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTB-GGGS-HHHHHHTTGGGSCTTCEEESCEEE
T ss_pred cccccCCCCcccEEEEecccccc-chhc-cHHHHHHHHHhCCCCcEEECCccE
Confidence 2 1114689999976653222 1222 356888888999999999854443
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.09 E-value=1.5e-05 Score=74.96 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=66.3
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
+|++..+.. .+...+||++||.|+.++.+++. ..+|+++|.|+.+++.|++ +. ++|++++++|..++
T Consensus 12 ~e~le~L~~---~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~-------~~rv~lv~~~f~~l 78 (285)
T 1wg8_A 12 QEALDLLAV---RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH-------LPGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHHHTC---CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC-------CTTEEEEESCGGGH
T ss_pred HHHHHhhCC---CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc-------cCCEEEEECCcchH
Confidence 555555432 34578999999999999999998 4699999999999999998 64 25899999998765
Q ss_pred ---HhhCCCCCccEEEEcC
Q 017607 209 ---LRQVPRGKYDAIIVDS 224 (369)
Q Consensus 209 ---l~~~~~~~fDvIi~D~ 224 (369)
+.....+++|.|+.|+
T Consensus 79 ~~~L~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADL 97 (285)
T ss_dssp HHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHcCCCCcCEEEeCC
Confidence 5444335799999875
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.06 E-value=1.5e-05 Score=75.10 Aligned_cols=160 Identities=11% Similarity=0.076 Sum_probs=96.3
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc-chHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-DAVE 207 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-Da~~ 207 (369)
.++... .++ ++..+||||||+.|+++..+++..++..|+++|+...... .|.....+...-+.+..+ |.+
T Consensus 71 ~ei~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~~di~- 141 (300)
T 3eld_A 71 RWLHER-GYL--RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDKSNVF- 141 (300)
T ss_dssp HHHHHH-TSC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECSCCTT-
T ss_pred HHHHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecCceee-
Confidence 555555 333 4677999999999999999998766778999999643210 010000001112223211 322
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCC-ceEEecccccchhhhHHHHHHHHHHHHCCCCeeE
Q 017607 208 FLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFKGSVHY 284 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~Lkpg-Gilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~ 284 (369)
....+++|+|++|.....+.. .+..+...++.+.+.|+|| |.||+-.-.+| ......++..++..|. .|..
T Consensus 142 ---~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~-~V~~ 215 (300)
T 3eld_A 142 ---TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG-GGIV 215 (300)
T ss_dssp ---TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC-CEEE
T ss_pred ---ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC-cEEE
Confidence 223568999999976443321 2222234577888999999 99997532222 4567788999999999 4543
Q ss_pred EEEEEe-eccCCcEEEEEeecCC
Q 017607 285 AWASVP-TYPSGIIGFLICSTEG 306 (369)
Q Consensus 285 ~~~~vP-~~p~g~w~f~~ask~~ 306 (369)
.-| +=++..-.|++|....
T Consensus 216 ---~KPaSR~~S~E~Y~V~~~r~ 235 (300)
T 3eld_A 216 ---RVPFSRNSTHEMYYISGARN 235 (300)
T ss_dssp ---CCTTSCTTCCCEEEESSCCC
T ss_pred ---EeCCCCCCChHHeeeccCCC
Confidence 345 1112234677776543
No 290
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.91 E-value=5.7e-05 Score=79.24 Aligned_cols=114 Identities=21% Similarity=0.293 Sum_probs=84.9
Q ss_pred CEEEEEeCcccHHHHHHHhcC------------CCcEEEEEEC---CHHHHHHHHhhchh-----------hcC------
Q 017607 144 KTVLVVGGGDGGVLREISRHD------------SVELIDICEI---DKMVIDVSKKYFPE-----------LAV------ 191 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~------------~~~~V~~VEi---d~~vi~~ar~~~~~-----------~~~------ 191 (369)
-+|||+|.|+|.......+.. ...+++.+|. +++.+..+-..++. +..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999988765531 1246899999 88888755444332 110
Q ss_pred --CCCC--CCEEEEEcchHHHHhhCC---CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 192 --GFED--PRVRLHIGDAVEFLRQVP---RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 192 --~~~~--~rv~v~~~Da~~~l~~~~---~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
.+++ -+++++.+|+.+.+++.. ..+||+|+.|.+.|... ..+++.++|+.+.++++|||.+++.+.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC-GGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC-hhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 0222 457789999999988653 35799999999877544 358999999999999999999997653
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.81 E-value=6e-05 Score=79.33 Aligned_cols=115 Identities=20% Similarity=0.289 Sum_probs=82.9
Q ss_pred CCEEEEEeCcccHHHHHHHhcC----------C--CcEEEEEEC---CHHHHHHHHhhchhh-----------cC-----
Q 017607 143 PKTVLVVGGGDGGVLREISRHD----------S--VELIDICEI---DKMVIDVSKKYFPEL-----------AV----- 191 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~----------~--~~~V~~VEi---d~~vi~~ar~~~~~~-----------~~----- 191 (369)
+-+|||+|.|+|.....+.+.. + ..+++.+|. +.+.+..+-+.++.. ..
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999988776531 1 257899999 555555443333321 00
Q ss_pred ---CCCCC--CEEEEEcchHHHHhhCC---CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 192 ---GFEDP--RVRLHIGDAVEFLRQVP---RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 192 ---~~~~~--rv~v~~~Da~~~l~~~~---~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
.+++. +++++.+|+.+.+++.. ...+|+|++|.+.|...+ .+++.++|..+.++++|||.+++.+.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np-~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNP-DMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CC-TTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCCh-hhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 12333 57889999999998653 368999999998876543 48899999999999999999997653
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.79 E-value=0.00011 Score=68.00 Aligned_cols=137 Identities=14% Similarity=0.136 Sum_probs=82.2
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCE---EEEEc-c
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRV---RLHIG-D 204 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv---~v~~~-D 204 (369)
.|+-.-- + ..+..+|||+||+-|+.+..+++..++..|.+..|.... . ..|.. ...+.+ ++..+ |
T Consensus 63 ~EIdeK~-l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~---~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 63 RWLVERR-F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPML---MQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHTT-S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCC---CCSTTGGGEEEECSCC
T ss_pred HHHHHcC-C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCc---ccCCCceEEEeeccCC
Confidence 5555543 3 345679999999999999999887444454555443221 0 01110 000233 44447 8
Q ss_pred hHHHHhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCCc-eEEecccccchhhhHHHHHHHHHHHHCCCC
Q 017607 205 AVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGG-VLCNMAESMWLHTHLIEDMISICRETFKGS 281 (369)
Q Consensus 205 a~~~l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~LkpgG-ilv~~~~s~~~~~~~~~~i~~~l~~~F~~~ 281 (369)
.++ ....++|+|++|.....+.. ++.-+...++.+.+.|+||| .|++-.-.+ ....+.++++.+++.|. .
T Consensus 132 f~~----~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg--~~~~~~~~l~~lk~~F~-~ 204 (269)
T 2px2_A 132 VFY----KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP--YMPKVIEKLESLQRRFG-G 204 (269)
T ss_dssp GGG----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT--TSHHHHHHHHHHHHHHC-C
T ss_pred ccC----CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC--CchHHHHHHHHHHHHcC-C
Confidence 776 22458999999976542221 11112225677789999999 887643111 12456677889999998 4
Q ss_pred ee
Q 017607 282 VH 283 (369)
Q Consensus 282 v~ 283 (369)
+.
T Consensus 205 vk 206 (269)
T 2px2_A 205 GL 206 (269)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.61 E-value=0.00017 Score=67.96 Aligned_cols=150 Identities=19% Similarity=0.201 Sum_probs=86.7
Q ss_pred hHHHHHHHhccc--cCCCCCCEEEEEeC------cccHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhchhhcCCCCCC
Q 017607 126 CAYQEMIAHLPL--CSIPSPKTVLVVGG------GDGGVLREISRHDSV-ELIDICEIDKMVIDVSKKYFPELAVGFEDP 196 (369)
Q Consensus 126 ~~Y~e~l~~~~l--~~~~~p~~VLdIG~------G~G~~~~~l~k~~~~-~~V~~VEid~~vi~~ar~~~~~~~~~~~~~ 196 (369)
..|+.+-..+-- ...|...+|||+|+ .-|+. .+.+..+. ..|+++||.+-.. +.
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s---------------da 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS---------------DA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC---------------SS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc---------------CC
Confidence 457776666532 23567889999996 55653 22223333 4899999975431 22
Q ss_pred CEEEEEcchHHHHhhCCCCCccEEEEcCCCCC-CC--ccc----cccHHHHHHHHHhccCCceEEecccccchhhhHHHH
Q 017607 197 RVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPV-GP--AQE----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 269 (369)
Q Consensus 197 rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~-~~--~~~----L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~ 269 (369)
. .++++|..+.. ..++||+||+|..... +. ... -+-+..++-+.+.|+|||.|++-. +.... .+
T Consensus 154 ~-~~IqGD~~~~~---~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV---FQGsg--~~ 224 (344)
T 3r24_A 154 D-STLIGDCATVH---TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI---TEHSW--NA 224 (344)
T ss_dssp S-EEEESCGGGEE---ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE---CSSSC--CH
T ss_pred C-eEEEccccccc---cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE---ecCCC--HH
Confidence 3 44999976532 2468999999976543 22 111 123456777889999999998632 11111 12
Q ss_pred HHHHHHHHCCCCeeEEEEEEeeccCCcEEEEEeec
Q 017607 270 MISICRETFKGSVHYAWASVPTYPSGIIGFLICST 304 (369)
Q Consensus 270 i~~~l~~~F~~~v~~~~~~vP~~p~g~w~f~~ask 304 (369)
.+..+++.|. .|..+. --+-....-.|++|..
T Consensus 225 ~L~~lrk~F~-~VK~fK--~ASRa~SsEvYLVG~g 256 (344)
T 3r24_A 225 DLYKLMGHFS-WWTAFV--TNVNASSSEAFLIGAN 256 (344)
T ss_dssp HHHHHHTTEE-EEEEEE--EGGGTTSSCEEEEEEE
T ss_pred HHHHHHhhCC-eEEEEC--CCCCCCCeeEEEEeee
Confidence 3444566887 555442 1111222345777653
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.56 E-value=0.00035 Score=63.86 Aligned_cols=140 Identities=15% Similarity=0.147 Sum_probs=92.7
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc-c
Q 017607 126 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-D 204 (369)
Q Consensus 126 ~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D 204 (369)
+.-.|+.... +. ....+||||||+.|+.+..++....+.+|.++|+-+.-. ..|.+-..+.-+.+++..+ |
T Consensus 65 ~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 65 AKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSCC
T ss_pred HHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEeccc
Confidence 3346666655 32 345599999999999999999888888999999965432 1232222233467999999 8
Q ss_pred hHHHHhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCC
Q 017607 205 AVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG 280 (369)
Q Consensus 205 a~~~l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~ 280 (369)
.+. + +..++|+|++|.....+.+ +.--+...++.+.+.|++ |-+++-.-+|+. + .+.+.++.++..|..
T Consensus 137 v~~-~---~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~-p-~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 137 VFY-L---PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM-P-TVIEHLERLQRKHGG 207 (267)
T ss_dssp GGG-C---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS-H-HHHHHHHHHHHHHCC
T ss_pred eee-c---CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC-h-hHHHHHHHHHHHhCC
Confidence 633 2 2467999999976522221 222234467777889998 788775544443 2 234667888888983
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.52 E-value=0.00042 Score=67.59 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=54.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
....+|||||++.|+.+..+++.. .+|++||+.+.- .. +. .+++|+++.+|++.+.. +.++||+|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~-~~----l~------~~~~V~~~~~d~~~~~~--~~~~~D~v 274 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMA-QS----LM------DTGQVTWLREDGFKFRP--TRSNISWM 274 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCC-HH----HH------TTTCEEEECSCTTTCCC--CSSCEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcC-hh----hc------cCCCeEEEeCccccccC--CCCCcCEE
Confidence 356799999999999999999884 589999976421 11 11 25799999999988742 24579999
Q ss_pred EEcCCC
Q 017607 221 IVDSSD 226 (369)
Q Consensus 221 i~D~~~ 226 (369)
++|...
T Consensus 275 vsDm~~ 280 (375)
T 4auk_A 275 VCDMVE 280 (375)
T ss_dssp EECCSS
T ss_pred EEcCCC
Confidence 999864
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.44 E-value=0.00038 Score=71.22 Aligned_cols=133 Identities=15% Similarity=0.125 Sum_probs=84.5
Q ss_pred CCEEEEEeCcccHHHHHHHhc----CC---------CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH
Q 017607 143 PKTVLVVGGGDGGVLREISRH----DS---------VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 209 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~----~~---------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l 209 (369)
..+|+|-.||+|+++..+.++ .. ...+.++|+++.+..+|+-++-..+. ...++..+|...+-
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~----~~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL----EYPRIDPENSLRFP 293 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC----SCCEEECSCTTCSC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC----ccccccccccccCc
Confidence 458999999999999877653 11 23699999999999999987654422 23467788876431
Q ss_pred --hhCCCCCccEEEEcCCCCCCC------------ccccccHHHHHHHHHhcc-------CCceEEecccccc-hhhhHH
Q 017607 210 --RQVPRGKYDAIIVDSSDPVGP------------AQELVEKPFFDTIAKALR-------PGGVLCNMAESMW-LHTHLI 267 (369)
Q Consensus 210 --~~~~~~~fDvIi~D~~~p~~~------------~~~L~~~ef~~~~~~~Lk-------pgGilv~~~~s~~-~~~~~~ 267 (369)
......+||+||.+++..... ...-....|++.+.+.|+ |||.+++...+.+ +....-
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~ 373 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGIS 373 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHH
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchH
Confidence 111235799999876542110 001112457888888887 6998876554333 333333
Q ss_pred HHHHHHHHHHCC
Q 017607 268 EDMISICRETFK 279 (369)
Q Consensus 268 ~~i~~~l~~~F~ 279 (369)
..+.+.+-+.+.
T Consensus 374 ~~iRk~Lle~~~ 385 (530)
T 3ufb_A 374 ARIKEELLKNFN 385 (530)
T ss_dssp HHHHHHHHHHSE
T ss_pred HHHHHHHhhcCE
Confidence 456666655553
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.40 E-value=0.00018 Score=69.95 Aligned_cols=59 Identities=12% Similarity=0.046 Sum_probs=50.6
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 208 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 208 (369)
...||+||.|.|.+++.|++.....+|++||+|+..+...++.+. .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~-------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE-------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT-------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc-------CCCEEEEECCccch
Confidence 468999999999999999986434689999999999998888662 36899999999766
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.38 E-value=0.00041 Score=65.34 Aligned_cols=141 Identities=14% Similarity=0.218 Sum_probs=90.8
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc-c
Q 017607 126 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-D 204 (369)
Q Consensus 126 ~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D 204 (369)
+.-.++.... ++ ....+||||||+.|+.+..++...++.+|.++|+-..-.+ .|.+-..+.-+-|+++.+ |
T Consensus 81 ~KL~ei~~~~-~l--~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 81 AKLRWLVERR-FL--EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVD 152 (321)
T ss_dssp HHHHHHHHTT-SC--CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCC
T ss_pred HHHHHHHHhc-CC--CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccC
Confidence 3345666552 22 3445999999999999999988888889999999654110 111111112234777777 7
Q ss_pred hHHHHhhCCCCCccEEEEcCCCCCCCc--cccccHHHHHHHHHhccCC-ceEEecccccchhhhHHHHHHHHHHHHCCC
Q 017607 205 AVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFKG 280 (369)
Q Consensus 205 a~~~l~~~~~~~fDvIi~D~~~p~~~~--~~L~~~ef~~~~~~~Lkpg-Gilv~~~~s~~~~~~~~~~i~~~l~~~F~~ 280 (369)
.+. + ++.++|+|++|.....+.+ +.--+...++.+.+.|++| |-+++-.-+||. ..+.+.++.++..|..
T Consensus 153 v~~-l---~~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 153 VFY-R---PSECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRYGG 225 (321)
T ss_dssp TTS-S---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHHCC
T ss_pred Hhh-C---CCCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHhCC
Confidence 533 2 2367999999987432221 2222344677888999999 888876555543 2344677888888983
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.28 E-value=0.0008 Score=64.73 Aligned_cols=85 Identities=24% Similarity=0.262 Sum_probs=63.5
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
+|++..+.. .+...++|..+|.|+-++.+++. .+..+|+++|.|+.+++.++ .+. +.|++++.++..+
T Consensus 47 ~Evl~~L~i---~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-------~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 47 DEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-------DPRFSIIHGPFSA 115 (347)
T ss_dssp HHHHHHTCC---CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-------CTTEEEEESCGGG
T ss_pred HHHHHhhCC---CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-------CCcEEEEeCCHHH
Confidence 444444422 34568999999999999999986 45679999999999999985 441 4699999998766
Q ss_pred H---HhhCC-CCCccEEEEcC
Q 017607 208 F---LRQVP-RGKYDAIIVDS 224 (369)
Q Consensus 208 ~---l~~~~-~~~fDvIi~D~ 224 (369)
+ +.... .+++|.|+.|+
T Consensus 116 l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 116 LGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp HHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHhcCCCCcccEEEECC
Confidence 5 33321 13699999884
No 300
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.17 E-value=0.0027 Score=58.87 Aligned_cols=142 Identities=16% Similarity=0.125 Sum_probs=90.0
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-------CCCcEEEEEE-----CCH----------------------HHHH-HH--H
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-------DSVELIDICE-----IDK----------------------MVID-VS--K 183 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-------~~~~~V~~VE-----id~----------------------~vi~-~a--r 183 (369)
.-|..|+++|+--|+.+..++.. .+..+|.+.| ..+ +.++ +. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34779999999999988886542 3457899998 221 0011 11 1
Q ss_pred hhchhhcCCCCCCCEEEEEcchHHHHhh----CCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 184 KYFPELAVGFEDPRVRLHIGDAVEFLRQ----VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 184 ~~~~~~~~~~~~~rv~v~~~Da~~~l~~----~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+++... +..+.+++++.|++.+.+.. .+..++|+|.+|.- .+. -+...|+.+...|+|||++++.-.+
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D--~Y~----~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD--LYE----PTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC--CHH----HHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc--ccc----hHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 111111 22247899999999887754 34457999999983 121 1467899999999999999974321
Q ss_pred cchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccCC
Q 017607 260 MWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSG 295 (369)
Q Consensus 260 ~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~g 295 (369)
.+. .....+.+.+.+.. -.......|++|..
T Consensus 220 ---~~~-w~G~~~A~~ef~~~-~~~~i~~~p~~~~~ 250 (257)
T 3tos_A 220 ---NPK-WPGENIAMRKVLGL-DHAPLRLLPGRPAP 250 (257)
T ss_dssp ---CTT-CTHHHHHHHHHTCT-TSSCCEECTTCSCC
T ss_pred ---CCC-ChHHHHHHHHHHhh-CCCeEEEccCCCCC
Confidence 111 12456667777763 23334567777653
No 301
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.14 E-value=0.0014 Score=64.40 Aligned_cols=109 Identities=13% Similarity=-0.042 Sum_probs=68.2
Q ss_pred CCEEEEEeCcccHHHHHHHhc-----------------CCCcEEEEEECC-----------HHHHHHHHhhchhhcCCCC
Q 017607 143 PKTVLVVGGGDGGVLREISRH-----------------DSVELIDICEID-----------KMVIDVSKKYFPELAVGFE 194 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~-----------------~~~~~V~~VEid-----------~~vi~~ar~~~~~~~~~~~ 194 (369)
+-+|+|+||++|..+..+... .+.-+|...|+- +.+.+..++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 678999999999988776543 234567778876 4444433332110
Q ss_pred CCCEEEEEcchHHHHhh-CCCCCccEEEEcCCCCCCC--cccccc---------------------------------HH
Q 017607 195 DPRVRLHIGDAVEFLRQ-VPRGKYDAIIVDSSDPVGP--AQELVE---------------------------------KP 238 (369)
Q Consensus 195 ~~rv~v~~~Da~~~l~~-~~~~~fDvIi~D~~~p~~~--~~~L~~---------------------------------~e 238 (369)
..+--++.+....|-.. .+++++|+|++..+-+|.. +..+.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12235666666655432 3568999999887766632 111111 13
Q ss_pred HHHHHHHhccCCceEEecc
Q 017607 239 FFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 239 f~~~~~~~LkpgGilv~~~ 257 (369)
|++..++.|+|||.+++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEE
Confidence 4777799999999998754
No 302
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.12 E-value=0.0011 Score=64.99 Aligned_cols=129 Identities=17% Similarity=0.182 Sum_probs=74.2
Q ss_pred HHHHHhccccC--CCCCCEEEEEeCcccHHHHHHHh--------c-------CCCcEEEEEECCHHHHHHHHhhchhhcC
Q 017607 129 QEMIAHLPLCS--IPSPKTVLVVGGGDGGVLREISR--------H-------DSVELIDICEIDKMVIDVSKKYFPELAV 191 (369)
Q Consensus 129 ~e~l~~~~l~~--~~~p~~VLdIG~G~G~~~~~l~k--------~-------~~~~~V~~VEid~~vi~~ar~~~~~~~~ 191 (369)
.+.+..+.... .+.+-+|+|+|||+|..+..+.. + ++.-+|...|+-..-....=+.++....
T Consensus 37 ~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~ 116 (374)
T 3b5i_A 37 EETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVS 116 (374)
T ss_dssp HHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCC
T ss_pred HHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhh
Confidence 33444444332 24567999999999999877621 1 2445777777755443333233332211
Q ss_pred CC--------CCCCEEEEEcchHHHH-hhCCCCCccEEEEcCCCCCCC--ccccc-------------------------
Q 017607 192 GF--------EDPRVRLHIGDAVEFL-RQVPRGKYDAIIVDSSDPVGP--AQELV------------------------- 235 (369)
Q Consensus 192 ~~--------~~~rv~v~~~Da~~~l-~~~~~~~fDvIi~D~~~p~~~--~~~L~------------------------- 235 (369)
.. ...+--++.+.+..|- +-.+++++|+|++..+-+|-. +..+.
T Consensus 117 ~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay 196 (374)
T 3b5i_A 117 NTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAY 196 (374)
T ss_dssp CC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHH
T ss_pred hcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHH
Confidence 00 0011234455544432 223578999999888777633 22221
Q ss_pred -------cHHHHHHHHHhccCCceEEecc
Q 017607 236 -------EKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 236 -------~~ef~~~~~~~LkpgGilv~~~ 257 (369)
-..|++..++.|+|||.+++..
T Consensus 197 ~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 197 KRQFQADLAEFLRARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 1246888899999999998654
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.96 E-value=0.00083 Score=63.35 Aligned_cols=47 Identities=19% Similarity=0.070 Sum_probs=41.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhh
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL 189 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~ 189 (369)
.....|||++||+|.++.++++.. .+++++|+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 456799999999999999998875 58999999999999999987654
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.91 E-value=0.0051 Score=59.26 Aligned_cols=151 Identities=16% Similarity=0.190 Sum_probs=88.3
Q ss_pred CCEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAI 220 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvI 220 (369)
+.+|+|+.||.|++...+.+..- .+.|.++|+|+..++..+.+++. ..++.+|..++... .+...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999999887642 35799999999999999999863 34677888765321 111259999
Q ss_pred EEcCCCCC-CCc----------cccccHHHHHHHHHhcc--CCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEE
Q 017607 221 IVDSSDPV-GPA----------QELVEKPFFDTIAKALR--PGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWA 287 (369)
Q Consensus 221 i~D~~~p~-~~~----------~~L~~~ef~~~~~~~Lk--pgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~ 287 (369)
+.+.+... +.+ ..|+ .+++ .+.+.++ |.-+++=++... .....+..+.+.+.+. ...+.+...
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~-~~~~-~~i~~~~~~P~~~~~ENV~~l-~~~~~~~~i~~~l~~~-GY~v~~~vl 148 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSF-LHIL-DILPRLQKLPKYILLENVKGF-EVSSTRDLLIQTIENC-GFQYQEFLL 148 (343)
T ss_dssp EECCC------------------CHH-HHHH-HHGGGCSSCCSEEEEEEETTG-GGSHHHHHHHHHHHHT-TEEEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchHH-HHHH-HHHHHhcCCCCEEEEeCCccc-cCHHHHHHHHHHHHHC-CCeeEEEEE
Confidence 98765321 111 0111 2233 3445566 776666333332 2344566676666553 112222212
Q ss_pred EEeec--cC-CcEEEEEeecCC
Q 017607 288 SVPTY--PS-GIIGFLICSTEG 306 (369)
Q Consensus 288 ~vP~~--p~-g~w~f~~ask~~ 306 (369)
.--.| |- -.-.|+++.++.
T Consensus 149 ~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 149 SPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp CGGGGTCSCCCCEEEEEEEESS
T ss_pred EHHHCCCCCcccEEEEEEEeCC
Confidence 11223 10 245788888764
No 305
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.90 E-value=0.00026 Score=60.13 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=43.4
Q ss_pred CCCCEEEEEeCccc-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGDG-GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~G-~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..+.+||+||||.| .++..|+++.+ ..|+++||+|..++ ++.+|.++...+. -+.||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~-Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEI-YRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHH-HTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccc-cCCcCE
Confidence 34679999999999 69999987533 57999999977554 5566665532211 137999
Q ss_pred EE
Q 017607 220 II 221 (369)
Q Consensus 220 Ii 221 (369)
|.
T Consensus 93 IY 94 (153)
T 2k4m_A 93 IY 94 (153)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 306
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.78 E-value=0.0014 Score=63.81 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=76.4
Q ss_pred CCCCCEEEEEeCcccHHHHHHHhc----------------CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc
Q 017607 140 IPSPKTVLVVGGGDGGVLREISRH----------------DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG 203 (369)
Q Consensus 140 ~~~p~~VLdIG~G~G~~~~~l~k~----------------~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~ 203 (369)
.+++-+|+|+||++|..+..+... .+.-+|...|+-..-....-+.++.... ..+--++.+
T Consensus 49 ~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~---~~~~~f~~g 125 (359)
T 1m6e_X 49 VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND---VDGVCFING 125 (359)
T ss_dssp SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS---CTTCEEEEE
T ss_pred CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc---cCCCEEEEe
Confidence 355668999999999776543322 3456888999988877777776664321 113466667
Q ss_pred chHHHHhh-CCCCCccEEEEcCCCCCCC--ccc--------------------ccc-------HHHHHHHHHhccCCceE
Q 017607 204 DAVEFLRQ-VPRGKYDAIIVDSSDPVGP--AQE--------------------LVE-------KPFFDTIAKALRPGGVL 253 (369)
Q Consensus 204 Da~~~l~~-~~~~~fDvIi~D~~~p~~~--~~~--------------------L~~-------~ef~~~~~~~LkpgGil 253 (369)
.+..|-.. .+++++|+|++..+-+|.. +.. .|. ..|++..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 66655332 3568999999887666522 111 222 34678889999999999
Q ss_pred Eecc
Q 017607 254 CNMA 257 (369)
Q Consensus 254 v~~~ 257 (369)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8653
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.71 E-value=0.0028 Score=61.26 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=66.4
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-. +.-+.....|..+.+.+...+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEecCCccCHHHHHHHhcCCCCcE
Confidence 4567999999876 7777788887655579999999999999876421 1001111124444443332347999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||-... ..+.++.+.+.|+++|.++...
T Consensus 262 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG----------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEeC
Confidence 883221 1246888999999999998654
No 308
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.51 E-value=0.0074 Score=57.95 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=64.7
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE------cchHHHHhhCC
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI------GDAVEFLRQVP 213 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~------~Da~~~l~~~~ 213 (369)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. + .++. .|..+-+.+..
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHHh
Confidence 4567999999875 7777788887655589999999999998876421 1 1222 12222232211
Q ss_pred CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 214 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.+.+|+||-... ....++.+.+.|+++|.++...
T Consensus 240 ~~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG----------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEe
Confidence 256999884221 1235788899999999998754
No 309
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.44 E-value=0.0061 Score=59.01 Aligned_cols=100 Identities=18% Similarity=0.256 Sum_probs=68.3
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh---CCCCC
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ---VPRGK 216 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~---~~~~~ 216 (369)
...++||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-.. .-+.....|..+.+.+ ...+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-------~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT-------ATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-------EEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-------EEECCCCcCHHHHHHhhhhccCCC
Confidence 4578999999865 77777888887666899999999999998874211 0011112355555544 32347
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+||-.. + ..+.++.+.+.|+++|.++...
T Consensus 254 ~Dvvid~~----G------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECA----G------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECS----C------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECC----C------CHHHHHHHHHHhccCCEEEEEe
Confidence 99888322 1 1346889999999999998754
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.43 E-value=0.017 Score=55.37 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=67.9
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE-----cchHHHHhhC-C
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-----GDAVEFLRQV-P 213 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~Da~~~l~~~-~ 213 (369)
...++||++|+|. |.++..+++..+...|++++.+++-.+.+++. . +.-+.... .|..+.+++. .
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHHHHHHHhC
Confidence 4567999999765 77777888887665699999999999999886 2 11233221 2333334332 2
Q ss_pred CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 214 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
...+|+|+-.. + ....++.+.+.|+++|.++...
T Consensus 250 g~g~Dvvid~~----g------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECT----G------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECS----C------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECC----C------ChHHHHHHHHHhcCCCEEEEEc
Confidence 35799888322 1 1246888999999999998754
No 311
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.34 E-value=0.02 Score=55.95 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=89.4
Q ss_pred CEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh------CCCCCc
Q 017607 144 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ------VPRGKY 217 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~------~~~~~f 217 (369)
-+|+|+-||.|++...+.+.. ...|.++|+|+..++..+.+++ ...++.+|..++... .....+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 379999999999999988774 5678899999999999998875 456778887764211 123579
Q ss_pred cEEEEcCCCCCC-Cc---------cccccHHHHHHHHHhccCCceEEecccccch--hhhHHHHHHHHHHHHCCCCe-eE
Q 017607 218 DAIIVDSSDPVG-PA---------QELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRETFKGSV-HY 284 (369)
Q Consensus 218 DvIi~D~~~p~~-~~---------~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~~~~~~i~~~l~~~F~~~v-~~ 284 (369)
|+|+.+.+.... .+ ..|+ .+|+ .+.+.++|.-+++=++..... ....++.+. .+.+. ...+ .+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~-~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~-GY~v~~~ 148 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLY-MHFY-RLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSG-DYDILDP 148 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHH-HHHH-HHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHT-TEEECCC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHH-HHHH-HHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcC-CCccCcE
Confidence 999987654321 11 1122 2344 445567898777755443332 223455555 55443 1112 22
Q ss_pred EEEEEeeccC---CcEEEEEeecC
Q 017607 285 AWASVPTYPS---GIIGFLICSTE 305 (369)
Q Consensus 285 ~~~~vP~~p~---g~w~f~~ask~ 305 (369)
....--.|.- -.-.|++|++.
T Consensus 149 ~vl~a~dyGvPQ~R~R~~iig~r~ 172 (376)
T 3g7u_A 149 IKVKASDYGAPTIRTRYFFIGVKK 172 (376)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEEG
T ss_pred EEEEHhhCCCCCCCcEEEEEEEeC
Confidence 2222222311 23578888865
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.30 E-value=0.0069 Score=57.67 Aligned_cols=98 Identities=17% Similarity=0.281 Sum_probs=67.5
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. .+.+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~-~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGA-------EVAVNARDTDPAAWLQKE-IGGAHG 235 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHH-HSSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCC-------CEEEeCCCcCHHHHHHHh-CCCCCE
Confidence 4567999999865 8888888888654 89999999999998877421 100111113444445442 247999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+.... ..+.++.+.+.|+++|.++...
T Consensus 236 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 885432 2356889999999999998754
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.28 E-value=0.0063 Score=58.33 Aligned_cols=100 Identities=22% Similarity=0.249 Sum_probs=66.4
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCcc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fD 218 (369)
...++||++|+|. |.++..++++.+..+|+++|.+++-++.+++.-. +.-+.....|..+.+.+. ....+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-------TDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-------CEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-------ceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 4567899999765 7777788888765589999999999998887521 100111113444444433 234699
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+-.... .+.++.+.+.|+++|.++...
T Consensus 238 ~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 238 KVVIAGGD----------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEECSSC----------TTHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCC----------hHHHHHHHHHHhcCCEEEEec
Confidence 98832211 135788999999999998653
No 314
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.07 E-value=0.052 Score=51.85 Aligned_cols=147 Identities=18% Similarity=0.145 Sum_probs=92.3
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
..+|+|+.||.|++...+.+.. ...+.++|+|+..++..+.+++.. . .+|..++....- ..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~-~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTI-PDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGS-CCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhC-CCCCEEEE
Confidence 4689999999999999988764 677999999999999999998632 1 588877643321 35999998
Q ss_pred cCCCCC-CCc----------cccccHHHHHHHHHhccCCceEEecccccchh--hhHHHHHHHHHHHHCCCCeeEEEEEE
Q 017607 223 DSSDPV-GPA----------QELVEKPFFDTIAKALRPGGVLCNMAESMWLH--THLIEDMISICRETFKGSVHYAWASV 289 (369)
Q Consensus 223 D~~~p~-~~~----------~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~--~~~~~~i~~~l~~~F~~~v~~~~~~v 289 (369)
+.+... ..+ ..|+ .++++ +.+.++|.-+++=++...... ...+..+.+.+.+. ...+.+....-
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~-~~~~r-~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~-GY~v~~~vl~a 154 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLF-FDIAR-IVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNEL-DYSFHAKVLNA 154 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHH-HHHHH-HHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHT-TBCCEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHH-HHHHH-HHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhC-CCEEEEEEEEH
Confidence 765422 111 1122 34444 445679987776454433221 24566777777654 11234433333
Q ss_pred eeccC---CcEEEEEeecC
Q 017607 290 PTYPS---GIIGFLICSTE 305 (369)
Q Consensus 290 P~~p~---g~w~f~~ask~ 305 (369)
..|.. -.-.|+++.++
T Consensus 155 ~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 155 LDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGGTCSBCCEEEEEEEEBG
T ss_pred HHcCCCccceEEEEEEEeC
Confidence 33411 13578888765
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.03 E-value=0.0074 Score=57.58 Aligned_cols=67 Identities=16% Similarity=0.230 Sum_probs=49.1
Q ss_pred CCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCcc----------ccccHHHHHHHHHhccCCceEEeccccc
Q 017607 194 EDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQ----------ELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 194 ~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~----------~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
...+.+++.+|+.+.++..++++||+|++|.+-...... ..+..+.++.++++|+|||.+++..+..
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 356799999999998877767799999988754332100 0123567889999999999998865543
No 316
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.01 E-value=0.01 Score=57.50 Aligned_cols=100 Identities=17% Similarity=0.147 Sum_probs=66.6
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |.++..+++..+..+|+++|.+++-++.+++.=. +.-+... ..|..+.+++...+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-------NEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-------CEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-------cEEEccccCchhHHHHHHHhcCCCC
Confidence 4567999999763 6777778887655689999999999998876411 1000000 1344454544434589
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. + ..+.++.+.+.|+++ |.++...
T Consensus 265 D~vid~~----g------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECI----G------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECS----C------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECC----C------CHHHHHHHHHHhhccCCEEEEEc
Confidence 9988322 1 134688999999997 9988654
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.97 E-value=0.0094 Score=58.17 Aligned_cols=109 Identities=10% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch-HHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da-~~~l~~~-~~~~f 217 (369)
...++||++|+|. |.++..+++..+..+|+++|.+++-++.+++. .. + -+.....|. .+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GF------E-TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CC------c-EEcCCCcchHHHHHHHHhCCCCC
Confidence 4567999999876 77888888876555899999999999988764 11 0 111111232 3333322 22369
Q ss_pred cEEEEcCCCCCC-C-c--cccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVG-P-A--QELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~-~-~--~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||-....+.. . . .++-....++.+.+.|+++|.+++..
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 998843322110 0 0 00001235788999999999998643
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.93 E-value=0.015 Score=55.53 Aligned_cols=65 Identities=17% Similarity=0.221 Sum_probs=47.7
Q ss_pred CCCEEEE-EcchHHHHhhCCCCCccEEEEcCCCCCCCc-------cccccHHHHHHHHHhccCCceEEecccc
Q 017607 195 DPRVRLH-IGDAVEFLRQVPRGKYDAIIVDSSDPVGPA-------QELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 195 ~~rv~v~-~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~-------~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+...+++ .+|++++++..+++++|+|++|.+-..... ..-+..+.+..++++|+|||.+++....
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 3457888 999999998777779999998876543310 0012356778889999999999887653
No 319
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.91 E-value=0.08 Score=50.71 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=88.8
Q ss_pred CEEEEEeCcccHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCccEEE
Q 017607 144 KTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAII 221 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvIi 221 (369)
-+|+|+-||.|++...+.+..- .+.|.++|+|+..++.-+.+++. ..++.+|..++... .+...+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 4799999999999998877642 35688999999999999998863 23566777654221 1123699999
Q ss_pred EcCCCCCCC-----------ccccccHHHHHHHHHhcc-CCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEE
Q 017607 222 VDSSDPVGP-----------AQELVEKPFFDTIAKALR-PGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASV 289 (369)
Q Consensus 222 ~D~~~p~~~-----------~~~L~~~ef~~~~~~~Lk-pgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~v 289 (369)
...+..... -..|+ .++++ +.+.++ |.-+++=++... .....+..+.+.+.+. ...+.+....-
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~~~vlENV~gl-~~~~~~~~i~~~l~~~-GY~v~~~vl~a 150 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVDYILMENVKGF-ENSTVRNLFIDKLKEC-NFIYQEFLLCP 150 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCCEEEEEECTTG-GGSHHHHHHHHHHHHT-TEEEEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHH-HHHHhcCCCEEEEecchhh-hhhhHHHHHHHHHHhC-CCeEEEEEecH
Confidence 765432210 11232 23443 444565 877776555432 2234456666666553 11222222111
Q ss_pred eeccC---CcEEEEEeecCCCC
Q 017607 290 PTYPS---GIIGFLICSTEGPH 308 (369)
Q Consensus 290 P~~p~---g~w~f~~ask~~~~ 308 (369)
..|.- -.-.|++|.++..+
T Consensus 151 ~~~GvPQ~R~R~fiva~r~~~~ 172 (333)
T 4h0n_A 151 STVGVPNSRLRYYCTARRNNLT 172 (333)
T ss_dssp TTTTCSCCCCEEEEEEEETTSC
T ss_pred HHcCCCccceEEEEEEEeCCCC
Confidence 12210 24578999887533
No 320
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.038 Score=53.26 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=64.4
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |..+..+++..+..+|++++.+++-++.+++.-. +.-+... ..|..+.+.+...+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-------TDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-------CEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC-------ceEEeccccchhHHHHHHHHhCCCC
Confidence 3567999999764 6667778887655589999999999998876411 1000000 0233343433222479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. +. .+.++.+.+.|+++ |.++...
T Consensus 264 D~vid~~----g~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 264 DFSLECV----GN------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SEEEECS----CC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECC----CC------HHHHHHHHHHhhcCCcEEEEEc
Confidence 9988322 11 24678899999999 9998654
No 321
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.83 E-value=0.048 Score=52.51 Aligned_cols=100 Identities=18% Similarity=0.071 Sum_probs=64.7
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+.+...+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA-------TECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-------ceEecccccchhHHHHHHHHhCCCC
Confidence 4567999999764 6667778887655589999999999888876411 1000000 0234444443323479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. +. .+.++.+.+.|+++ |.++...
T Consensus 263 D~vid~~----g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 263 DFSFEVI----GR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SEEEECS----CC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred cEEEECC----CC------HHHHHHHHHHhhcCCcEEEEec
Confidence 9888322 11 24678889999999 9998653
No 322
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.80 E-value=0.01 Score=54.68 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=40.9
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE 188 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~ 188 (369)
.....|||..||+|.++.++.+.. .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 456789999999999999988874 6899999999999999998764
No 323
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.78 E-value=0.038 Score=52.43 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=67.2
Q ss_pred CCCCEEEEEeCccc-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCcc
Q 017607 141 PSPKTVLVVGGGDG-GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G-~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fD 218 (369)
...++||++|+|.+ .++..+++.....+|+++|.+++-.+.+++.-.. .-+.....|..+.+.+. ....+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------VTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------EEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------EEEeCCCCCHHHHhhhhcCCCCce
Confidence 45679999998764 4555566665567999999999988888875321 12333334555555443 233588
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+++.+.. ....+..+.+.|+++|.++...
T Consensus 235 ~~~~~~~----------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAV----------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCS----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEecc----------CcchhheeheeecCCceEEEEe
Confidence 8876543 1346888899999999988654
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.74 E-value=0.018 Score=55.53 Aligned_cols=100 Identities=14% Similarity=0.007 Sum_probs=64.7
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+.+...+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-------TECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------cEEEecccccchHHHHHHHHhCCCC
Confidence 4567999999764 6667778887655589999999999888876411 1000000 0234444443323479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. +. .+.++.+.+.|+++ |.++...
T Consensus 263 Dvvid~~----g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECA----GR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECS----CC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CEEEECC----CC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 9888322 11 24678899999999 9998654
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.68 E-value=0.048 Score=52.43 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=64.5
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+++...+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-------TECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-------ceEeccccccccHHHHHHHHhCCCC
Confidence 3567999999764 6667777887655589999999999998876411 1000000 0234444443323479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. +. .+.++.+.+.|+++ |.++...
T Consensus 262 D~vid~~----g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 262 DYSFECI----GN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SEEEECS----CC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECC----Cc------HHHHHHHHHhhccCCcEEEEEe
Confidence 9988322 11 24678899999999 9998654
No 326
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.68 E-value=0.026 Score=53.71 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=65.9
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCcc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fD 218 (369)
...++||++|+|. |..+..+++.....+|+++|.+++-.+.+++.-. + .+--...|..+.+.+. ....+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~-~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------D-AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------S-EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------C-EEEcCCCcHHHHHHHHhCCCCCe
Confidence 4567999999765 7777778887545799999999999999887421 1 1110112333333332 223799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+-.. + ....++.+.+.|+++|.++...
T Consensus 242 ~v~d~~----G------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFV----G------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESS----C------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECC----C------CHHHHHHHHHHHhcCCEEEEEC
Confidence 888322 1 1346889999999999998654
No 327
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.64 E-value=0.021 Score=55.13 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=64.5
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE--EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~f 217 (369)
...++||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+.+...+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-------TDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-------SEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-------cEEEccccccchHHHHHHHHhCCCc
Confidence 3567999999764 6667778887655589999999998888876411 1000000 0234444433222479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCC-ceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~~ 257 (369)
|+||-.. +. .+.++.+.+.|+++ |.++...
T Consensus 267 Dvvid~~----G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSLDCA----GT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEEESS----CC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred cEEEECC----CC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 9988322 11 24688899999999 9998654
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.62 E-value=0.013 Score=54.98 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=44.5
Q ss_pred CCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCc-----cc---c-----c---cHHHHHHHHHhccCCceEEeccc
Q 017607 195 DPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPA-----QE---L-----V---EKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 195 ~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~-----~~---L-----~---~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
..+++++++|+.++++..++++||+|++|.+-..... .. + + ..++++.+.++|+|||.+++..+
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3578999999999987666679999998865421110 00 0 1 13467789999999999987654
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.59 E-value=0.03 Score=53.46 Aligned_cols=99 Identities=17% Similarity=0.136 Sum_probs=62.9
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE-cchHHHHhh-CC---C
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-GDAVEFLRQ-VP---R 214 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~Da~~~l~~-~~---~ 214 (369)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. +.-+.... .|..+-+.+ .. .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 4567999999764 6667778887654 59999999999998876421 10011110 232333322 11 2
Q ss_pred CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 215 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 215 ~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+.+|+||-... . ...++.+.+.|+++|.++...
T Consensus 239 ~g~D~vid~~g----~------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG----N------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC----C------HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC----C------HHHHHHHHHHHhcCCEEEEEe
Confidence 46999884321 1 235788889999999998754
No 330
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.55 E-value=0.13 Score=49.18 Aligned_cols=153 Identities=9% Similarity=0.079 Sum_probs=86.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC-CCcEE-EEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh-hCCCCCcc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD-SVELI-DICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~-~~~~V-~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~~fD 218 (369)
.+-+|+|+-||.|++...+.+.. +.+.+ .++|+|+..++..+.+++.. ++.+|..++.. +.+...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 35589999999999999887764 23567 79999999999999988632 44566554321 11112699
Q ss_pred EEEEcCCCCCC------Ccccc--ccHHHHHHHH----Hhc--cCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeE
Q 017607 219 AIIVDSSDPVG------PAQEL--VEKPFFDTIA----KAL--RPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY 284 (369)
Q Consensus 219 vIi~D~~~p~~------~~~~L--~~~ef~~~~~----~~L--kpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~ 284 (369)
+|+...+.... ..... -.-..+..+. +.+ +|.-+++=++... .....+..+.+.+.+. ...+.+
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl-~~~~~~~~i~~~l~~~-GY~v~~ 156 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF-KESLVFKEIYNILIKN-QYYIKD 156 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG-GGSHHHHHHHHHHHHT-TCEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh-cChHHHHHHHHHHHhC-CCEEEE
Confidence 99976543222 10000 0112233333 355 6776666444332 2234566777777654 212333
Q ss_pred EEEEEeeccC---CcEEEEEeecCC
Q 017607 285 AWASVPTYPS---GIIGFLICSTEG 306 (369)
Q Consensus 285 ~~~~vP~~p~---g~w~f~~ask~~ 306 (369)
....--.|.- -.-.|++|.++.
T Consensus 157 ~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 157 IICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EEECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEEeHHHcCCCccceEEEEEEEeCC
Confidence 3222222310 235788888764
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.51 E-value=0.014 Score=53.63 Aligned_cols=61 Identities=18% Similarity=0.283 Sum_probs=45.2
Q ss_pred CEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCc--cc--------cccHHHHHHHHHhccCCceEEecc
Q 017607 197 RVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPA--QE--------LVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 197 rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~--~~--------L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
..+++.+|+.++++..++++||+|++|.+-..... .. -+..+.++.++++|+|+|.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 35689999999998877779999998876543310 00 133567788899999999988764
No 332
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.49 E-value=0.021 Score=49.71 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=60.5
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++..+.+++. .. +..+.....|..+.+.+ ...+.+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 45678999994 55666666666543 5899999999988777652 10 10111111233333332 223469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||... +. +.++.+.+.|+++|.++...
T Consensus 109 D~vi~~~----g~-------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSL----AG-------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECC----CT-------HHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECC----ch-------HHHHHHHHHhccCCEEEEEc
Confidence 9998533 21 35788899999999998744
No 333
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.47 E-value=0.036 Score=54.18 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=63.4
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCcc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fD 218 (369)
...++||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH-------VIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EEcCCCCCHHHHHHHHhCCCCCC
Confidence 4567999999754 666777888776669999999999999998752110 0000013444444433 234699
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhc----cCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKAL----RPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~L----kpgGilv~~~ 257 (369)
+||-.. +.. ...++.+.+.| +++|.++...
T Consensus 285 ~vid~~----g~~-----~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEAT----GVP-----QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECS----SCH-----HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECC----CCc-----HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 888322 211 12455555566 9999998754
No 334
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.45 E-value=0.042 Score=52.61 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=61.5
Q ss_pred CEEEEEeCc-ccHHH-HHHH-hcCCCcEEEEEECCHH---HHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCc
Q 017607 144 KTVLVVGGG-DGGVL-REIS-RHDSVELIDICEIDKM---VIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217 (369)
Q Consensus 144 ~~VLdIG~G-~G~~~-~~l~-k~~~~~~V~~VEid~~---vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~f 217 (369)
++||++|+| -|..+ ..++ +..+..+|++++.+++ -.+.+++.-.. .+.....|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~--------~v~~~~~~~~~-i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT--------YVDSRQTPVED-VPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE--------EEETTTSCGGG-HHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc--------ccCCCccCHHH-HHHh-CCCC
Confidence 899999964 36667 7788 8765555999999988 78888763111 11001124444 4433 3479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||- .. +. ...++.+.+.|+++|.++...
T Consensus 244 Dvvid-~~---g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIYE-AT---GF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEE-CS---CC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEE-CC---CC------hHHHHHHHHHHhcCCEEEEEe
Confidence 98873 22 11 236788999999999998654
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.40 E-value=0.044 Score=51.93 Aligned_cols=100 Identities=12% Similarity=0.112 Sum_probs=64.9
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCcc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fD 218 (369)
...++||++|+|. |.++..+++......+++++.+++-++.+++.=. +.-+.....|..+.++.. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCcc
Confidence 4567999999764 5556667887777788999999999999987521 111111123333433322 124578
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+-.. + ..+.++.+.+.|+++|.+++..
T Consensus 232 ~v~d~~----G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETA----G------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECS----C------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccc----c------ccchhhhhhheecCCeEEEEEe
Confidence 776322 1 1346888999999999998754
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.31 E-value=0.04 Score=53.02 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=64.7
Q ss_pred CCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..++||++| +|-|.++..+++.....+|++++.+++-.+.+++. .... .++. ..|..+.+.+...+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi~~------~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VIDH------SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EECT------TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EEeC------CCCHHHHHHHhcCCCceE
Confidence 356899998 45678888888863346899999999999988773 2100 0011 124444454444457998
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+-.. + ....++.+.++|+++|.++..
T Consensus 243 vid~~----g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTT----H------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECS----C------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECC----C------chhhHHHHHHHhcCCCEEEEE
Confidence 87322 1 224688899999999999865
No 337
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.29 E-value=0.039 Score=53.64 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=66.6
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcc-hHHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGD-AVEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D-a~~~l~~~-~~~~f 217 (369)
...++||++|+|. |.++..+++..+..+|+++|.+++-++.+++.-. + -+.....| ..+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 4567999999765 7778888888765689999999999999876411 1 01110112 23334332 22469
Q ss_pred cEEEEcCCCCC-CC----ccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPV-GP----AQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~-~~----~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||-....+. +. .........++.+.+.|+++|.++...
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99884332211 00 000111236888999999999998643
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.25 E-value=0.034 Score=53.86 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=63.4
Q ss_pred CCCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE------cchHHHHhhCC
Q 017607 141 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI------GDAVEFLRQVP 213 (369)
Q Consensus 141 ~~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~------~Da~~~l~~~~ 213 (369)
...++||++|+| -|..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC------c---EEEeccccCcchHHHHHHHHh
Confidence 456799999954 466677788876545899999999999988763 11 1 1222 23333343322
Q ss_pred -CCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 214 -RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 214 -~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
...+|+||-... . .+.++.+.+.|+++|.++...
T Consensus 264 ~g~g~Dvvid~~g----~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATG----D------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSS----C------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCC----C------HHHHHHHHHHHhcCCEEEEEe
Confidence 236999884321 1 125778889999999998654
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.18 E-value=0.027 Score=53.68 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCccE
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~fDv 219 (369)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY-------VINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-------EECCCCcCHHHHHHHHcCCCCCCE
Confidence 567899999753 666777788765448999999999988887642110 0000012444444332 2236999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||-... ..+.++.+.+.|+++|.++...
T Consensus 240 vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG----------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEEc
Confidence 884321 1246788899999999998654
No 340
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.15 E-value=0.029 Score=53.13 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=64.8
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+.+.+.. +.-+.....|..+.+.+...+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCce
Confidence 45679999997 56777777787765 4899999999988888333321 100111113444444433345799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+-... .+.++.+.+.|+++|.++...
T Consensus 221 ~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVG-----------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC-----------cchHHHHHHHHhhCCEEEEEe
Confidence 8874331 135788899999999998654
No 341
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.08 E-value=0.1 Score=49.97 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=63.1
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE---cchHHHHhhC-CCC
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI---GDAVEFLRQV-PRG 215 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~~-~~~ 215 (369)
...++||++|+|. |..+..+++..+ .+|++++.+++-++.+++.-. + .++. .|..+.+.+. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGA-------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTC-------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHcCC-------C---EEEcCCcccHHHHHHHHhCCC
Confidence 4567999999765 667777888765 489999999999998877421 1 1121 2333333332 234
Q ss_pred CccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 216 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.+|+|+-... . +.++.+.+.|+++|.++...
T Consensus 257 g~D~vid~~g----~-------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG----G-------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT----S-------SCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC----h-------HHHHHHHHHhhcCCEEEEEe
Confidence 7998884332 1 13667889999999998653
No 342
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.92 E-value=0.014 Score=55.55 Aligned_cols=98 Identities=21% Similarity=0.264 Sum_probs=62.7
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..++||++|+|. |..+..+++..+..+|++++.+++-++.+++. ...-.... ..|..+.+.+.....+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~-------~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL-------EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT-------TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC-------ccCHHHHHHHhcCCCCCEE
Confidence 567899999753 66677778876544899999999888777664 21100011 1233333332213469998
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|-... . .+.++.+.+.|+++|.++...
T Consensus 236 id~~g----~------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSG----N------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSC----C------HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC----C------HHHHHHHHHHHhcCCEEEEEe
Confidence 84321 1 246788999999999998654
No 343
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.92 E-value=0.05 Score=51.38 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE-cchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-GDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~Da~~~l~~~~~~~f 217 (369)
...++||+.|+ |-|..+..+++..+ .+|++++.+++-++.+++. .. +..+.... .|..+.+.....+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 35678999996 56666666676654 4899999999888887543 21 10011111 344444443323579
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... . +.++.+.+.|+++|.++...
T Consensus 216 d~vi~~~g----~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG----G-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC----H-------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC----h-------HHHHHHHHHHhcCCEEEEEe
Confidence 99885432 1 24778889999999998654
No 344
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.92 E-value=0.18 Score=48.49 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=59.2
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
.+++||++|+|. |..+..+++..+. +|+++|.+++-.+.+++.+.. .+..+..+..++.+.. ..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV--AEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH--HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH--cCCCEE
Confidence 358999999742 3333344555544 899999999988887765432 2333332222222221 258999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|.....+......+... ...+.|+++|+++..+
T Consensus 235 I~~~~~~~~~~~~li~~----~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPA----SLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EECCCCTTSSCCCCBCH----HHHTTSCTTCEEEETT
T ss_pred EECCCcCCCCCCeecCH----HHHhhCCCCCEEEEEe
Confidence 86544333222333333 3556789999888644
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.85 E-value=0.071 Score=50.68 Aligned_cols=95 Identities=14% Similarity=0.010 Sum_probs=61.4
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch-HHHHhhC-CCCC
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQV-PRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da-~~~l~~~-~~~~ 216 (369)
..++||++|+|. |..+..+++.. + .+|++++.+++-.+.+++. .. + .++..+- .++++.. ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GA------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TC------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CC------C---EEeccccchHHHHHhhcCCC
Confidence 567999999864 66677777764 4 5799999999999888764 21 1 1121111 1222222 1237
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+||-... . .+.++.+.+.|+++|.++...
T Consensus 239 ~D~vid~~g----~------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG----T------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC----C------HHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCC----C------hHHHHHHHHHhhcCCEEEEeC
Confidence 999884321 1 236788999999999998643
No 346
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.78 E-value=0.05 Score=52.30 Aligned_cols=98 Identities=19% Similarity=0.161 Sum_probs=64.9
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++| +|.|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.++....+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GC------DRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCChhHHHHHHHhcCCCCC
Confidence 4567999999 667888888888764 4899999999988888763 21 100000012333444333235799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||-... . ..++.+.+.|+++|.++...
T Consensus 234 ~vid~~g----~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG----G-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC----T-------HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC----H-------HHHHHHHHHHhcCCEEEEEe
Confidence 9884321 1 35788899999999988654
No 347
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.77 E-value=0.094 Score=50.55 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=62.2
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++. .. + .++..+-.++++... +.+|+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GA------D---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC------S---EEEETTCHHHHHTTT-TCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEeccccHHHHHHhh-cCCCE
Confidence 4567999999875 677777888764 4699999999988888763 21 1 122211123343332 47999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||-.... + ..++.+.+.|+++|.++...
T Consensus 261 vid~~g~---~-------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 261 ILNTVAA---P-------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEECCSS---C-------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCC---H-------HHHHHHHHHhccCCEEEEec
Confidence 8843221 1 12567889999999998654
No 348
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.76 E-value=0.045 Score=52.00 Aligned_cols=98 Identities=21% Similarity=0.287 Sum_probs=63.1
Q ss_pred CCCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+| -|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+.. +.+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~~~~d~~~~~~~~~~~~~~-~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GA------DLVVNPLKEDAAKFMKEKV-GGVHA 233 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TC------SEEECTTTSCHHHHHHHHH-SSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CC------CEEecCCCccHHHHHHHHh-CCCCE
Confidence 456799999975 4666777787765 4899999999999988763 21 0000000123333333322 46999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||-... . ...++.+.+.|+++|.++...
T Consensus 234 vid~~g----~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAV----S------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSC----C------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----C------HHHHHHHHHHhhcCCEEEEec
Confidence 884331 1 246788899999999998653
No 349
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.48 E-value=0.57 Score=44.00 Aligned_cols=147 Identities=20% Similarity=0.224 Sum_probs=89.4
Q ss_pred EEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcC
Q 017607 145 TVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDS 224 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 224 (369)
+|+|+=||.|++..-+-+.+ ..-+.++|+|+..++.-+.+++ -+++.+|..+.-... -...|+|+...
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~~~~-~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHS----------AKLIKGDISKISSDE-FPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCCGGG-SCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCCHhh-CCcccEEEecC
Confidence 79999999999988876663 6678899999999999988875 156789987753221 23699998543
Q ss_pred CCCC----C-------CccccccHHHHHHHHHhccCCceEEecccccch--hhhHHHHHHHHHHHHCCCCeeEEEEEEee
Q 017607 225 SDPV----G-------PAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRETFKGSVHYAWASVPT 291 (369)
Q Consensus 225 ~~p~----~-------~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~~~~~~i~~~l~~~F~~~v~~~~~~vP~ 291 (369)
+... + +-..|+ .+++ .+.+.++|.-+++=++..... ....+..+++.+.+.= ..+.+....--.
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~-~~~~-r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vlna~~ 146 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLF-YEYI-RILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAG-YDVHIILLNAND 146 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHH-HHHH-HHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHT-EEEEEEEEEGGG
T ss_pred CCCCcCCCCCccCCCCchhHHH-HHHH-HHHhccCCeEEEeeeecccccccccchhhhhhhhhccCC-cEEEEEeccccc
Confidence 3211 1 011122 2334 455668998777755543322 2356677777776651 123333333233
Q ss_pred ccC---CcEEEEEeecCC
Q 017607 292 YPS---GIIGFLICSTEG 306 (369)
Q Consensus 292 ~p~---g~w~f~~ask~~ 306 (369)
|.- -.-.|++|.++.
T Consensus 147 yGvPQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 147 YGVAQDRKRVFYIGFRKE 164 (331)
T ss_dssp TTCSBCCEEEEEEEEEGG
T ss_pred CCCCcccceEEEEEEcCC
Confidence 311 134788887753
No 350
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.48 E-value=0.088 Score=50.11 Aligned_cols=97 Identities=14% Similarity=0.267 Sum_probs=63.8
Q ss_pred CCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..++||++| +|-|..+..+++..+ .+|++++.+++-++.+++.-... .++. ..|..+.+++...+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~--vi~~------~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKMGADI--VLNH------KESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHHTCSE--EECT------TSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCcE--EEEC------CccHHHHHHHhCCCCccE
Confidence 467999995 345677777888765 48999999999999888742110 0011 123444444433457998
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+-.. + ....++.+.++|+++|.++...
T Consensus 221 v~d~~----g------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTF----N------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESS----C------HHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECC----C------chHHHHHHHHHhccCCEEEEEC
Confidence 87422 1 2346788999999999998653
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.36 E-value=0.052 Score=51.71 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=63.8
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~f 217 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+... .|..+.+.+.. ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 45679999995 56777888888765 489999999988888887421 1111111 34444444332 3379
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+-.... +.++.+.+.|+++|.++...
T Consensus 229 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 229 DMVVDPIGG-----------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEESCC-------------CHHHHHHTEEEEEEEEEC-
T ss_pred eEEEECCch-----------hHHHHHHHhhcCCCEEEEEE
Confidence 988843321 13678889999999998643
No 352
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.32 E-value=0.19 Score=41.23 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=59.7
Q ss_pred CCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCccE
Q 017607 143 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDA 219 (369)
Q Consensus 143 p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~fDv 219 (369)
..+|+++|+|. |......++.. ..+|+++|.|++.++.+++. .+.++.+|+.+ .++...-...|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 35799999975 22222222222 35899999999998876642 46678888753 454433357999
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
||+-..+.. .....-...+.+.|+..++..+.
T Consensus 75 vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTIPNGY-------EAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEECCChH-------HHHHHHHHHHHHCCCCeEEEEEC
Confidence 997554311 11223345667788887776443
No 353
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.26 E-value=0.051 Score=51.78 Aligned_cols=99 Identities=11% Similarity=0.078 Sum_probs=62.8
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE-EcchHHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~-~~Da~~~l~~~~~~~f 217 (369)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.+. ..|..+.+.+...+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 35679999997 45666677777654 4899999998888877763 10 1001111 1233444433212379
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... ..+.++.+.+.|+++|.++...
T Consensus 240 D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSV----------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSS----------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCC----------cHHHHHHHHHHHhcCCEEEEEe
Confidence 99985432 1246788899999999998654
No 354
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.25 E-value=0.041 Score=52.29 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=61.6
Q ss_pred CCCCEEEEEeCc--ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVGGG--DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G--~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~f 217 (369)
...++||++|+| -|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga-------~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGA-------AYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCC-------cEEEeCCcccHHHHHHHHhCCCCC
Confidence 456799999976 5777777888754 489999999998888887421 100111113444433332 23479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||-... . .......+.|+++|.++...
T Consensus 215 Dvvid~~g----~-------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIG----G-------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSC----H-------HHHHHHHHTEEEEEEEEECC
T ss_pred cEEEECCC----C-------hhHHHHHHHhcCCCEEEEEe
Confidence 98884321 1 12334458999999998754
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.15 E-value=0.055 Score=51.33 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=63.9
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE---cchHHHHhhCCCC
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI---GDAVEFLRQVPRG 215 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~~~~~ 215 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++-++.+++.+.. ...+-. .|..+.++....+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~--------~~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGF--------DDAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCC--------SEEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC--------ceEEecCCHHHHHHHHHHHhCC
Confidence 35679999995 56777777777654 4899999999988888743321 111111 1333444433235
Q ss_pred CccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 216 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.+|+||.... .+.++.+.+.|+++|.++...
T Consensus 225 ~~d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFENVG-----------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEECCC-----------HHHHHHHHHHHhcCCEEEEEc
Confidence 6999884331 135788899999999998643
No 356
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.12 E-value=0.089 Score=50.06 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=61.7
Q ss_pred CCCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++. . .. .++ .|.. .+ . +.+|+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-G--------a~-~v~-~~~~-~~---~-~~~D~ 237 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-G--------VK-HFY-TDPK-QC---K-EELDF 237 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-T--------CS-EEE-SSGG-GC---C-SCEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-C--------CC-eec-CCHH-HH---h-cCCCE
Confidence 4578999999865 777778888765 4899999999999888773 2 11 122 3432 22 1 27998
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+-....+ +.++.+.+.|+++|.++...
T Consensus 238 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPTH----------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCcH----------HHHHHHHHHHhcCCEEEEEC
Confidence 88432211 13678889999999998754
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.11 E-value=0.051 Score=51.41 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=64.0
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~f 217 (369)
...++||++| +|-|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGA-------EYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------cEEEeCCCchHHHHHHHHhCCCCc
Confidence 4567999999 456777777888764 489999999999888877421 100111113444444332 23469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+-... . +.++.+.+.|+++|.++...
T Consensus 219 D~vid~~g----~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVG----K-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCG----G-------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCC----h-------HHHHHHHHHhccCCEEEEEc
Confidence 98884331 1 24778889999999998753
No 358
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.08 E-value=0.081 Score=50.50 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=61.3
Q ss_pred CEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 144 KTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 144 ~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
++||+.|+ |-|..+..+++..+..+|++++.+++-.+.+++.+.. +.-+.....|..+.+.+...+.+|+||
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCCCCEEE
Confidence 79999996 5566666667765444899999999888877764321 100111112333334332223799988
Q ss_pred EcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 222 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 222 ~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.... .+.++.+.+.|+++|.++...
T Consensus 236 ~~~G-----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 236 DNVG-----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp ESCC-----------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECCC-----------HHHHHHHHHHhccCcEEEEEC
Confidence 5332 145788899999999998643
No 359
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.99 E-value=0.045 Score=51.64 Aligned_cols=98 Identities=10% Similarity=0.052 Sum_probs=63.8
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||++| +|-|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+ .....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHhCCCCc
Confidence 4567999998 456777777888754 489999999999998886421 10111111334444433 223479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+-... . +.++.+.+.|+++|.++...
T Consensus 211 Dvvid~~g----~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVG----Q-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSC----G-------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC----h-------HHHHHHHHHhcCCCEEEEEe
Confidence 98884322 1 24678889999999998754
No 360
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.97 E-value=0.42 Score=48.08 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=79.4
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHh------------
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR------------ 210 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~------------ 210 (369)
.-+|+|+-||.|++...+.+.. ...|.++|+|+..++.-+.++.. .|...++.+|..++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 3489999999999998887663 56689999999999998888742 2455678899887751
Q ss_pred ----hCCCCCccEEEEcCCCCC-CCcc-------------------ccccHHHHHHHHHhccCCceEEecccccch--hh
Q 017607 211 ----QVPRGKYDAIIVDSSDPV-GPAQ-------------------ELVEKPFFDTIAKALRPGGVLCNMAESMWL--HT 264 (369)
Q Consensus 211 ----~~~~~~fDvIi~D~~~p~-~~~~-------------------~L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~ 264 (369)
.. ...+|+|+...+... ..+. .|+ .+++ .+.+.++|.-+++=++..... ..
T Consensus 161 ~~i~~~-~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~-riI~~~rPk~fvlENV~gl~s~~~g 237 (482)
T 3me5_A 161 EHIRQH-IPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVV-RIIDARRPAMFVLENVKNLKSHDKG 237 (482)
T ss_dssp HHHHHH-SCCCSEEEEECCCCCC------------------CTTTTSHH-HHHH-HHHHHHCCSEEEEEEETTTTTGGGG
T ss_pred hhhhhc-CCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHH-HHHHHcCCcEEEEeCcHHHhcccCC
Confidence 11 135899997654322 1111 121 2333 344567898777655443332 23
Q ss_pred hHHHHHHHHHHH
Q 017607 265 HLIEDMISICRE 276 (369)
Q Consensus 265 ~~~~~i~~~l~~ 276 (369)
..+..+++.+.+
T Consensus 238 ~~f~~i~~~L~~ 249 (482)
T 3me5_A 238 KTFRIIMQTLDE 249 (482)
T ss_dssp HHHHHHHHHHHH
T ss_pred cHHHHHHHHHhc
Confidence 456666666655
No 361
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.91 E-value=0.052 Score=51.93 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=63.0
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+...+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGA-------KRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------CEEEeCCchHHHHHHHHHhCCCce
Confidence 4567999996 456777777888764 489999999999998887421 100111112333333332245799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||-... . +.++.+.+.|+++|.++...
T Consensus 238 vvid~~g----~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIG----A-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCC----G-------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCC----H-------HHHHHHHHHhccCCEEEEEE
Confidence 8884332 1 14677889999999998653
No 362
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.91 E-value=0.4 Score=46.44 Aligned_cols=98 Identities=21% Similarity=0.335 Sum_probs=57.8
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc---chHHHHhhCCCCCc
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG---DAVEFLRQVPRGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~---Da~~~l~~~~~~~f 217 (369)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-++.+++.+.. .+.+... |..+.+ ...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l-----~~a 232 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV-----KRA 232 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH-----HHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH-----cCC
Confidence 467999999853 222333344444 4899999999988877765431 2222222 222322 258
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.....|......++.. ...+.|+|||+++..+
T Consensus 233 DvVi~~~~~p~~~t~~li~~----~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 233 DLVIGAVLVPGAKAPKLVSN----SLVAHMKPGAVLVDIA 268 (377)
T ss_dssp SEEEECCCCTTSCCCCCBCH----HHHTTSCTTCEEEEGG
T ss_pred CEEEECCCcCCCCCcceecH----HHHhcCCCCcEEEEEe
Confidence 99997544333222334444 4556789999988644
No 363
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.85 E-value=0.062 Score=51.14 Aligned_cols=100 Identities=22% Similarity=0.276 Sum_probs=61.4
Q ss_pred CCCCEEEEEeCc--ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCC-CCc
Q 017607 141 PSPKTVLVVGGG--DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR-GKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G--~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~-~~f 217 (369)
...++||++|+| .|..+..+++.....+|++++.+++-.+.+++. .. +.-+.....|..+.+.+... +.+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GA------DYVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC------CEEecCCCccHHHHHHHHhcCCCc
Confidence 456799999987 455556666654125899999999998888763 11 10011001233222333222 479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... . ...++.+.+.|+++|.++...
T Consensus 242 d~vi~~~g----~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 242 DAVIDLNN----S------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEESCC----C------HHHHTTGGGGEEEEEEEEECC
T ss_pred eEEEECCC----C------HHHHHHHHHHHhcCCEEEEEC
Confidence 99885332 1 235778889999999998653
No 364
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.48 E-value=0.16 Score=48.17 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=62.9
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~f 217 (369)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+. ....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GA------DETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 35679999997 56777777888764 4899999999998888763 11 100111112333333332 22479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... .. .++.+.+.|+++|.++...
T Consensus 237 d~vi~~~g---~~--------~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG---AL--------YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC---SS--------SHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC---HH--------HHHHHHHhhccCCEEEEEe
Confidence 99885432 11 3678889999999998654
No 365
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.20 E-value=0.4 Score=39.72 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=60.0
Q ss_pred CCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECC-HHHHHHHHhhchhhcCCCCCCCEEEEEcchH--HHHhhCCCCCc
Q 017607 143 PKTVLVVGGGDGGVLREISRH--DSVELIDICEID-KMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQVPRGKY 217 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid-~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~~~~~f 217 (369)
.++|+++|+| .++..+++. ....+|+++|.+ ++..+..++.++ ..+.++.+|+. +.+....-+..
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhC
Confidence 3579999864 555555432 113579999998 455544433322 34788999975 34443223579
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccccc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
|+||+...+. . .........+.+.|...++....++
T Consensus 73 d~vi~~~~~d--~-----~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 73 RAILALSDND--A-----DNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SEEEECSSCH--H-----HHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CEEEEecCCh--H-----HHHHHHHHHHHHCCCCEEEEEECCH
Confidence 9999754331 1 1234455667777877777655443
No 366
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.14 E-value=0.15 Score=48.49 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=62.5
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC-CCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~~f 217 (369)
...++||++| +|-|..+..+++..+ .+|+++ .+++-++.+++.-. +. +. ...|..+.+.+. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~lGa-------~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDLGA-------TP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHHTS-------EE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHcCC-------CE-ec-cCCCHHHHHHHHhcCCCc
Confidence 4567999999 456778888888765 489999 88888888876421 11 22 223333433332 23479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+-.. +. +.++.+.+.|+++|.++...
T Consensus 218 D~vid~~----g~-------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTL----GG-------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESS----CT-------HHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECC----Cc-------HHHHHHHHHHhcCCeEEEEc
Confidence 9887422 11 35778889999999998653
No 367
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.01 E-value=0.16 Score=48.49 Aligned_cols=98 Identities=16% Similarity=0.058 Sum_probs=61.7
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+ .....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 45679999995 56666777777654 589999999998887765311 10011111233333322 223479
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... .+.++.+.+.|+++|.++...
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99884331 124677889999999998754
No 368
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.84 E-value=0.26 Score=47.31 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=62.9
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++|+ |-|..+..+++..+. +|+++- +++-.+.+++.-. +.-+.....|..+.+++..++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 45679999997 368888888988654 777774 7888888876421 111111123444555444345699
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhc-cCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKAL-RPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~L-kpgGilv~~~ 257 (369)
+|+-.. + ....++.+.+.| +++|.++...
T Consensus 234 ~v~d~~----g------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCI----T------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESS----C------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred EEEECC----C------chHHHHHHHHHhhcCCCEEEEEe
Confidence 887322 1 124677888899 6999998643
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.68 E-value=0.74 Score=44.28 Aligned_cols=99 Identities=20% Similarity=0.321 Sum_probs=55.2
Q ss_pred CCCEEEEEeCcccHHHHHH---HhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 142 SPKTVLVVGGGDGGVLREI---SRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l---~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.+++|+++|+| .+++.+ ++..+ .+|+++|.+++-++.+++.+. ..+.....+...+-+.. ...|
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~--~~~D 231 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV--QHAD 231 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH--HHCS
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH--hCCC
Confidence 36899999984 444443 34443 489999999988777665432 12333333322221111 2589
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||.....+......+... .+.+.|+++|+++..+
T Consensus 232 vVi~~~g~~~~~~~~li~~----~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 232 LLIGAVLVPGAKAPKLVTR----DMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EEEECCC-------CCSCH----HHHTTSCTTCEEEECC
T ss_pred EEEECCCCCccccchhHHH----HHHHhhcCCCEEEEEe
Confidence 9986554332112233333 4556789999888644
No 370
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.62 E-value=0.1 Score=48.92 Aligned_cols=88 Identities=22% Similarity=0.325 Sum_probs=56.9
Q ss_pred CCCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 141 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 141 ~~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
...++||++|+| -|.++..+++..+. +|++++ +++-.+.+++. . ...+..| .+ +. .+.+|+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-G----------a~~v~~d-~~---~v-~~g~Dv 202 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-G----------VRHLYRE-PS---QV-TQKYFA 202 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-T----------EEEEESS-GG---GC-CSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-C----------CCEEEcC-HH---Hh-CCCccE
Confidence 457899999985 37777788887654 899999 88888888774 1 1111234 22 22 457998
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+ |.. +.. ....+.++|+++|.++...
T Consensus 203 v~-d~~---g~~-------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IF-DAV---NSQ-------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EE-CC-----------------TTGGGEEEEEEEEEEC
T ss_pred EE-ECC---Cch-------hHHHHHHHhcCCCEEEEEe
Confidence 87 322 111 1245678999999998653
No 371
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.52 E-value=0.13 Score=48.52 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=62.2
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||+.| +|-|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 3567999999 467777777777754 5899999999888888763 11 10011111233333322 223469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||..... +.++.+.+.|+++|.++...
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999854321 13678889999999998654
No 372
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.50 E-value=0.056 Score=51.41 Aligned_cols=62 Identities=13% Similarity=-0.022 Sum_probs=49.5
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHH
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 209 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l 209 (369)
.....|||--||+|+++.++.+.. .+.+++|+++..++++++++... ......+.+|+.+..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHH
Confidence 445689999999999999988874 68999999999999999998754 223555666666654
No 373
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.43 E-value=0.25 Score=47.16 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=59.6
Q ss_pred CCCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH-HHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV-EFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~-~~l~~~~~~~fD 218 (369)
...++||++|+| -|..+..+++..+ .+|++++.+++-++.+++. .. + .++..+-. ++.+... +.+|
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHSC-SCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHhh-cCCC
Confidence 456799999974 3666777787654 4799999999888888763 21 1 12221111 2333332 4799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||-..... .+ +.++.+.+.|+++|.++...
T Consensus 246 ~vid~~g~~-~~-------~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIVVCASSL-TD-------IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEECCSCS-TT-------CCTTTGGGGEEEEEEEEECC
T ss_pred EEEECCCCC-cH-------HHHHHHHHHhcCCCEEEEec
Confidence 988433220 00 12445668999999998643
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.41 E-value=0.15 Score=48.61 Aligned_cols=98 Identities=11% Similarity=0.102 Sum_probs=60.9
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||++| +|-|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+ .....+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKLGA-------AAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCC-------cEEEecCChHHHHHHHHHhcCCCc
Confidence 4567899998 456666667777654 589999999998888865311 10011111233333332 223469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||..... +.++.+.+.|+++|.++...
T Consensus 233 d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 998854321 13667789999999998754
No 375
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.39 E-value=0.2 Score=47.16 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcE--EEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CC-CCCc
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVEL--IDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VP-RGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~--V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~-~~~f 217 (369)
.+-+|+|+-||.|++...+.+.. ... |.++|+|+..++..+.+++ ...++.+|..++... .+ ...+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG-~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLG-IQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTT-BCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCC-CccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 45689999999999998887764 333 7899999999998888764 346778888765321 11 1369
Q ss_pred cEEEEcCC
Q 017607 218 DAIIVDSS 225 (369)
Q Consensus 218 DvIi~D~~ 225 (369)
|+|+...+
T Consensus 85 Dll~ggpP 92 (295)
T 2qrv_A 85 DLVIGGSP 92 (295)
T ss_dssp SEEEECCC
T ss_pred CEEEecCC
Confidence 99997643
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.38 E-value=0.24 Score=47.38 Aligned_cols=93 Identities=20% Similarity=0.216 Sum_probs=57.8
Q ss_pred CCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 143 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDK---MVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~---~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.++||++|+|. |..+..+++..+ .+|++++.++ +-.+.+++.-. ..+. ..|..+.+.+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~~~ga--------~~v~--~~~~~~~~~~~-~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG-LEVWMANRREPTEVEQTVIEETKT--------NYYN--SSNGYDKLKDS-VGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT-CEEEEEESSCCCHHHHHHHHHHTC--------EEEE--CTTCSHHHHHH-HCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCccchHHHHHHHHhCC--------ceec--hHHHHHHHHHh-CCCCC
Confidence 67999999742 445556666654 4899999998 77777775311 1111 01222333222 25699
Q ss_pred EEEEcCCCCCCCccccccHHHH-HHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFF-DTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~-~~~~~~LkpgGilv~~~ 257 (369)
+||..... + ..+ +.+.+.|+++|.++...
T Consensus 249 ~vid~~g~---~-------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGA---D-------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCC---C-------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCC---h-------HHHHHHHHHHHhcCCEEEEEe
Confidence 98853321 1 145 78889999999998654
No 377
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.31 E-value=5.9 Score=43.24 Aligned_cols=152 Identities=13% Similarity=0.126 Sum_probs=92.2
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-----------
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ----------- 211 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~----------- 211 (369)
+-+++|+-||.|++..-+.+.+-...+.++|+|+..++.-+.+++ ...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhhh
Confidence 448999999999999888776422568899999999999888875 456778887665311
Q ss_pred --CC-CCCccEEEEcCCCCC-CCccc------------cccHHHHHHHHHhccCCceEEecccccch--hhhHHHHHHHH
Q 017607 212 --VP-RGKYDAIIVDSSDPV-GPAQE------------LVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISI 273 (369)
Q Consensus 212 --~~-~~~fDvIi~D~~~p~-~~~~~------------L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~~~~~~i~~~ 273 (369)
.+ .+.+|+|+...+-.. ..+.. |+ .+|+ .+.+.++|.-+++=++..... ....+..+++.
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~-~~~~-riv~~~rPk~~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFL-SYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHH-HHHH-HHHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred hhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHH-HHHH-HHHHHhCCCEEEEeccHHHhccCcchHHHHHHHH
Confidence 11 236899996544322 11111 11 2333 455668998777755433222 23456677777
Q ss_pred HHHHCCCCeeEEEEEEeeccC---CcEEEEEeecCC
Q 017607 274 CRETFKGSVHYAWASVPTYPS---GIIGFLICSTEG 306 (369)
Q Consensus 274 l~~~F~~~v~~~~~~vP~~p~---g~w~f~~ask~~ 306 (369)
+.+. ...+.+....-..|.- -.-.|++|++..
T Consensus 689 L~~l-GY~v~~~vLnA~dyGvPQ~R~R~fiva~r~g 723 (1002)
T 3swr_A 689 LVRM-GYQCTFGVLQAGQYGVAQTRRRAIILAAAPG 723 (1002)
T ss_dssp HHHH-TCEEEEEEEEGGGGTCSBCCEEEEEEEECTT
T ss_pred HHhc-CCeEEEEEEEHHHCCCCccceEEEEEEEeCC
Confidence 7654 2234444333333411 135788888753
No 378
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.31 E-value=0.13 Score=48.43 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=61.0
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-CCCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~f 217 (369)
...++||+.| +|-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCc
Confidence 3567999999 455666666666544 4899999999988888763 11 10011001233333322 223469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||.... . +.++.+.+.|+++|.++...
T Consensus 211 D~vi~~~g----~-------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG----R-------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC----G-------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc----h-------HHHHHHHHHhcCCCEEEEEe
Confidence 99885432 1 24778889999999998654
No 379
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.17 E-value=0.29 Score=45.42 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=60.7
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch-HHHHhhCCCCCc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da-~~~l~~~~~~~f 217 (369)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. . .. .++..+- .++.+.. +.+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g--------a~-~~~~~~~~~~~~~~~--~~~ 190 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-G--------AE-EAATYAEVPERAKAW--GGL 190 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-T--------CS-EEEEGGGHHHHHHHT--TSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-C--------CC-EEEECCcchhHHHHh--cCc
Confidence 45679999996 55677777888765 4899999999888887653 1 11 1222111 2333333 469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+- ... . .++.+.+.|+++|.++...
T Consensus 191 d~vid-~g~---~--------~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VRG---K--------EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CSC---T--------THHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CCH---H--------HHHHHHHhhccCCEEEEEe
Confidence 99885 421 1 3678889999999988643
No 380
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.14 E-value=0.37 Score=47.37 Aligned_cols=93 Identities=17% Similarity=0.198 Sum_probs=59.6
Q ss_pred CCEEEEEeCcccHHHHHHH---hcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCc
Q 017607 143 PKTVLVVGGGDGGVLREIS---RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 217 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~---k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~f 217 (369)
..+|+++|+|. +++.++ +.. ...|+++|.|++.++.+++. .+.++.+|+.+ .|+...-+..
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A 69 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSS-GVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKA 69 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTC
T ss_pred CCeEEEECCCH--HHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCcc
Confidence 34799999874 333333 222 35799999999999987752 35678899854 4655444679
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
|+||+...++. .....-...+.+.|+..++..
T Consensus 70 ~~viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 70 EVLINAIDDPQ-------TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp SEEEECCSSHH-------HHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEECCCChH-------HHHHHHHHHHHhCCCCeEEEE
Confidence 99997654321 122344556667777655543
No 381
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.09 E-value=0.21 Score=46.78 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=60.6
Q ss_pred EEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 145 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 145 ~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-...++....+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GA------N---RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TC------S---EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CC------C---EEEecCCHHHHHhhcCCCccEEE-
Confidence 4999995 678888888988754 899999999988888774 11 1 11111111112233345799876
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|.. + .+.++.+.++|+++|.++...
T Consensus 217 d~~---g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 217 DTV---G-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ESS---C-------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECC---C-------cHHHHHHHHHHhcCCEEEEEe
Confidence 332 1 136888999999999998653
No 382
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.00 E-value=0.99 Score=42.47 Aligned_cols=93 Identities=14% Similarity=0.100 Sum_probs=58.5
Q ss_pred CCEEEEEeCcc--cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCCCCCccE
Q 017607 143 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYDA 219 (369)
Q Consensus 143 p~~VLdIG~G~--G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~~~~fDv 219 (369)
..+|.+||+|. +.+++.+.+.....+|+++|.+++.++.+++. . . +.-...|..+ .+ ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G-----~----~~~~~~~~~~~~~-----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-G-----I----IDEGTTSIAKVED-----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-T-----S----CSEEESCTTGGGG-----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-C-----C----cchhcCCHHHHhh-----ccCCE
Confidence 36899999884 33445555554334899999999988877653 1 0 1112234333 22 25899
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
||+..+. . ...+.++.+...|+++.+++..+
T Consensus 98 Vilavp~--~-----~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 98 VMLSSPV--R-----TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp EEECSCG--G-----GHHHHHHHHHHHSCTTCEEEECC
T ss_pred EEEeCCH--H-----HHHHHHHHHhhccCCCcEEEECC
Confidence 9975432 1 13567888989999988776543
No 383
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.74 E-value=0.16 Score=43.33 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=66.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC---CCCCc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV---PRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~---~~~~f 217 (369)
.-+.-||++|.|.|.+=..+....|...|.+.|-.-. -.|. + ..+.-.++.||+++.+... -..+.
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~-------~hp~--~--~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA-------SHPD--S--TPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC-------CCGG--G--CCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec-------cCCC--C--CCchHheecccHHHHHHHHHHhcCCce
Confidence 3456799999999999999999888899999986211 1111 1 1344579999999887652 12345
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
-++-.|.-......+.-+..-.-..+..+|.|||+++.
T Consensus 108 ~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 108 SLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 56666654322111111112223466778999999985
No 384
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.69 E-value=3.2 Score=41.06 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=76.0
Q ss_pred CEEEEEeCcccHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCC--------CCCEEEEEcchHHHHhhC
Q 017607 144 KTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFE--------DPRVRLHIGDAVEFLRQV 212 (369)
Q Consensus 144 ~~VLdIG~G~G~~~--~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~--------~~rv~v~~~Da~~~l~~~ 212 (369)
.+|.+||+|.=+.. ..+++.. .+|+++|++++.++..++....... +++ ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 47999999854443 3344443 4899999999998877663211000 000 123443 34544433
Q ss_pred CCCCccEEEEcCCCCCCC---ccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC---CCeeEEE
Q 017607 213 PRGKYDAIIVDSSDPVGP---AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK---GSVHYAW 286 (369)
Q Consensus 213 ~~~~fDvIi~D~~~p~~~---~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~---~~v~~~~ 286 (369)
...|+||+..+.|... +.--+-.+.++.+...|+++-+++..+..+ +...+.+.+.+.+... ..+.+..
T Consensus 77 --~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~---pgt~~~l~~~l~~~~~~~~~~~d~~v 151 (450)
T 3gg2_A 77 --PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVP---VGSYRLIRKAIQEELDKREVLIDFDI 151 (450)
T ss_dssp --GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC---TTHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred --hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCC---CcchHHHHHHHHHhccccCcCcceeE
Confidence 2479999877655321 111133566788888899887777655322 2233344444444321 0134455
Q ss_pred EEEeecc
Q 017607 287 ASVPTYP 293 (369)
Q Consensus 287 ~~vP~~p 293 (369)
.+-|.+-
T Consensus 152 ~~~Pe~a 158 (450)
T 3gg2_A 152 ASNPEFL 158 (450)
T ss_dssp EECCCCC
T ss_pred Eechhhh
Confidence 6667653
No 385
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.67 E-value=0.64 Score=41.85 Aligned_cols=104 Identities=20% Similarity=0.175 Sum_probs=55.5
Q ss_pred HHHHHhccccCCCCCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEEC--CHHHHHHHHhhchhhcCCCCCCCEEEEEcc
Q 017607 129 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEI--DKMVIDVSKKYFPELAVGFEDPRVRLHIGD 204 (369)
Q Consensus 129 ~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEi--d~~vi~~ar~~~~~~~~~~~~~rv~v~~~D 204 (369)
.|.+..+|+...-..++||+||+|.=+..+. |++. ..+|++|+. ++++.+++.+ .+++++..+
T Consensus 17 ~~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~ 83 (223)
T 3dfz_A 17 IEGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAK-----------GQLRVKRKK 83 (223)
T ss_dssp -----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHT-----------TSCEEECSC
T ss_pred ccccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHc-----------CCcEEEECC
Confidence 3556667877666788999999986544433 3344 357888754 4444444322 356666544
Q ss_pred hHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccccc
Q 017607 205 AVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 205 a~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
...- .. ..+|+||....++ +.-..+.+.-+ -|++|..+++|
T Consensus 84 ~~~~--dL--~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~VNvvD~p 124 (223)
T 3dfz_A 84 VGEE--DL--LNVFFIVVATNDQ----------AVNKFVKQHIK-NDQLVNMASSF 124 (223)
T ss_dssp CCGG--GS--SSCSEEEECCCCT----------HHHHHHHHHSC-TTCEEEC----
T ss_pred CCHh--Hh--CCCCEEEECCCCH----------HHHHHHHHHHh-CCCEEEEeCCc
Confidence 3211 12 3699999654332 22334455545 79999766554
No 386
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.58 E-value=0.37 Score=47.24 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=40.8
Q ss_pred CCCCEEEEEeCcccHHHHHHH-hcCC-CcEEEEEECCHHHHHHHHhhchh
Q 017607 141 PSPKTVLVVGGGDGGVLREIS-RHDS-VELIDICEIDKMVIDVSKKYFPE 188 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~-k~~~-~~~V~~VEid~~vi~~ar~~~~~ 188 (369)
++...|+|||++.|..+..++ +..+ ..+|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456789999999999999988 5443 37999999999999999998765
No 387
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.44 E-value=0.6 Score=44.66 Aligned_cols=95 Identities=21% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.. + ..+-..| .+.+++.. +.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa------~--~v~~~~~-~~~~~~~~-~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGA------D--SFLVSRD-QEQMQAAA-GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCC------S--EEEETTC-HHHHHHTT-TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCC------c--eEEeccC-HHHHHHhh-CCCCEE
Confidence 567999999653 555666777764 4899999999888777644431 1 1111112 23344433 469998
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|-....+. .++.+.+.|+++|.++...
T Consensus 256 id~~g~~~----------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSAVH----------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSSCC----------CSHHHHHHEEEEEEEEECC
T ss_pred EECCCcHH----------HHHHHHHHHhcCCEEEEEc
Confidence 84332111 1446678899999988654
No 388
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.29 E-value=0.047 Score=65.29 Aligned_cols=96 Identities=18% Similarity=0.164 Sum_probs=0.0
Q ss_pred EEEEEeCcccHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhC---CCCC
Q 017607 145 TVLVVGGGDGGVLREISRHDS-----VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV---PRGK 216 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~~~-----~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~---~~~~ 216 (369)
+||+||.|+|..+..+++... ..+++..|+++.+.+.+++.|... .++.-.-| .... ....
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d----~~~~~~~~~~~ 1311 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWD----PANPAPGSLGK 1311 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCC----SSCCCC-----
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------cccccccc----ccccccCCCCc
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
||+||.....+.... ..+.++++++.|+|||.+++
T Consensus 1312 ydlvia~~vl~~t~~----~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1312 ADLLVCNCALATLGD----PAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp CCEEEEECC------------------------CCEEEE
T ss_pred eeEEEEccccccccc----HHHHHHHHHHhcCCCcEEEE
No 389
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.06 E-value=2.2 Score=42.61 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=65.1
Q ss_pred CCCEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhc-CCCC--------CCCEEEEEcchHHHHh
Q 017607 142 SPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELA-VGFE--------DPRVRLHIGDAVEFLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~-~~~~--------~~rv~v~~~Da~~~l~ 210 (369)
...+|.+||+|.-+. +..+++.. -+|+++|+|++.++..++.-.... .+.+ ..++++ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 456899999995443 34455553 479999999999988776421000 0000 123333 344433332
Q ss_pred hCCCCCccEEEEcCCCCC---CCccccccHHHHHHHHHhccCCceEEecc
Q 017607 211 QVPRGKYDAIIVDSSDPV---GPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~---~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
..|+||+..+.|. +.+.--+..+.++.+...|+++-+++..+
T Consensus 84 -----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 84 -----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp -----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 4799998776653 22222334567788888999988777544
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.97 E-value=0.68 Score=39.38 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=54.5
Q ss_pred CCEEEEEeCcccH-H-HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH--HHHhhC-CCCCc
Q 017607 143 PKTVLVVGGGDGG-V-LREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQV-PRGKY 217 (369)
Q Consensus 143 p~~VLdIG~G~G~-~-~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~-~~~~f 217 (369)
..+|+++|+|.=+ . ++.+.+.. ..+|+++|.|++.++.+++. .+.++.+|+. +.+... .-+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 4589999986422 1 22233330 24799999999888766542 2445667764 334443 23569
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+||+-..++. ... ..-...+.+.|++.++..+
T Consensus 107 d~vi~~~~~~~------~~~-~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPHHQ------GNQ-TALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSSHH------HHH-HHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeCCChH------HHH-HHHHHHHHHCCCCEEEEEE
Confidence 99997543211 011 2223455667777777544
No 391
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.95 E-value=2 Score=41.14 Aligned_cols=140 Identities=11% Similarity=0.146 Sum_probs=79.7
Q ss_pred CCEEEEEeCcccHHHH--HHHhcCCCcEEEEEECCHHHHHHHHhh------chhhcCCCCCCCEEEEEcchHHHHhhCCC
Q 017607 143 PKTVLVVGGGDGGVLR--EISRHDSVELIDICEIDKMVIDVSKKY------FPELAVGFEDPRVRLHIGDAVEFLRQVPR 214 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~--~l~k~~~~~~V~~VEid~~vi~~ar~~------~~~~~~~~~~~rv~v~~~Da~~~l~~~~~ 214 (369)
..+|.+||+|.-+.+. .+++.. .+|++++.+++.++..++. ++.. .+ .+++++ ..|..+.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~--~l-~~~i~~-t~d~~ea~----- 97 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNY--PF-PETLKA-YCDLKASL----- 97 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTC--CC-CTTEEE-ESCHHHHH-----
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCC--cc-CCCeEE-ECCHHHHH-----
Confidence 4589999998655443 344442 4799999999988876653 1211 11 123443 35554443
Q ss_pred CCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEEEEEeeccC
Q 017607 215 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPS 294 (369)
Q Consensus 215 ~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~~p~ 294 (369)
...|+||+-.+. . ..++.++.+...|+++-+++..+.... . .. ..+.+.+++.++ ...+....-|.+..
T Consensus 98 ~~aDvVilaVp~-----~--~~~~vl~~i~~~l~~~~ivvs~~kGi~-~-~t-~~~se~i~~~l~-~~~~~vlsgP~~a~ 166 (356)
T 3k96_A 98 EGVTDILIVVPS-----F--AFHEVITRMKPLIDAKTRIAWGTKGLA-K-GS-RLLHEVVATELG-QVPMAVISGPSLAT 166 (356)
T ss_dssp TTCCEEEECCCH-----H--HHHHHHHHHGGGCCTTCEEEECCCSCB-T-TT-BCHHHHHHHHHC-SCCEEEEESSCCHH
T ss_pred hcCCEEEECCCH-----H--HHHHHHHHHHHhcCCCCEEEEEeCCCC-c-Cc-cCHHHHHHHHcC-CCCEEEEECccHHH
Confidence 247999975432 1 345678888888888877664322111 1 11 334445566666 33455566677653
Q ss_pred ----Cc-EEEEEeec
Q 017607 295 ----GI-IGFLICST 304 (369)
Q Consensus 295 ----g~-w~f~~ask 304 (369)
|. ...++++.
T Consensus 167 ev~~g~pt~~via~~ 181 (356)
T 3k96_A 167 EVAANLPTAVSLASN 181 (356)
T ss_dssp HHHTTCCEEEEEEES
T ss_pred HHHcCCCeEEEEecC
Confidence 22 34455554
No 392
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.90 E-value=0.43 Score=44.74 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=56.3
Q ss_pred EEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 145 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 145 ~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....| .+.++....+.+|+||-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 7999995 66777788888765 4799999998888888763 21 1001110111 12222222346998874
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
... . +.++.+.+.|+++|.++...
T Consensus 223 ~~g----~-------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVG----G-------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CST----T-------TTHHHHHHTEEEEEEEEECS
T ss_pred CCc----H-------HHHHHHHHhhccCCEEEEEe
Confidence 321 1 12667889999999998653
No 393
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.72 E-value=3.3 Score=32.72 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=52.0
Q ss_pred CCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH--HHHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~~~~~fD 218 (369)
..+|+++|+| .++..+++. ....+|+++|.+++.++..++.+ .+.++.+|.. +.+....-..+|
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 3589999875 444443321 11257999999998776554322 2445666653 233322224699
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+||+-..++ . .......+.+.+.++-+++.
T Consensus 72 ~vi~~~~~~---~----~~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 72 MYIAVTGKE---E----VNLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp EEEECCSCH---H----HHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEeeCCc---h----HHHHHHHHHHHcCCCEEEEE
Confidence 999754321 1 11234455566777644443
No 394
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.71 E-value=0.49 Score=45.08 Aligned_cols=95 Identities=13% Similarity=0.080 Sum_probs=58.9
Q ss_pred CCCEEEEEeCc-ccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 142 SPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 142 ~p~~VLdIG~G-~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..++||++|+| -|..+..+++..+ .+|++++.+++-.+.+++.+.. + .+ +-..| .+.+++.. +.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa------~-~v-i~~~~-~~~~~~~~-~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGA------D-DY-VIGSD-QAKMSELA-DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCC------S-CE-EETTC-HHHHHHST-TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCC------c-ee-ecccc-HHHHHHhc-CCCCEE
Confidence 56799999865 3555666777654 4899999999888877744431 1 11 11122 23344433 469988
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|-....+ ..++.+.+.|+++|.++...
T Consensus 249 id~~g~~----------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH----------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC----------CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh----------HHHHHHHHHhccCCEEEEeC
Confidence 7432211 12456778999999998654
No 395
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.45 E-value=3 Score=41.63 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=63.5
Q ss_pred CEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhc-CCCC-------CCCEEEEEcchHHHHhhCC
Q 017607 144 KTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELA-VGFE-------DPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 144 ~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~-~~~~-------~~rv~v~~~Da~~~l~~~~ 213 (369)
.+|.+||+|.-+. +..+++.....+|+++|++++.++..++...... .+++ ..++++ ..|..+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh---
Confidence 4899999996544 4445665323589999999999887654210000 0000 012332 334333332
Q ss_pred CCCccEEEEcCCCCCCC-------cccc-ccHHHHHHHHHhccCCceEEecccc
Q 017607 214 RGKYDAIIVDSSDPVGP-------AQEL-VEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~-------~~~L-~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
..|+||+..+.|... ...+ +..+.++.+.+.|++|-+++..+..
T Consensus 86 --~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 137 (481)
T 2o3j_A 86 --EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTV 137 (481)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred --cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 379999877665421 0111 2355678888899998777754433
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.32 E-value=1.2 Score=35.87 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=44.8
Q ss_pred CEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCccE
Q 017607 144 KTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDA 219 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~fDv 219 (369)
++|+++|+|. ++..+++. ....+|+++|.|++.++.+++. .+.++.+|+.+ .++...-..+|+
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 5799999864 44444332 1135799999999988766542 35677888753 454443357999
Q ss_pred EEEcCC
Q 017607 220 IIVDSS 225 (369)
Q Consensus 220 Ii~D~~ 225 (369)
||+-..
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 986443
No 397
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.09 E-value=0.52 Score=46.36 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=61.4
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch-------------
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA------------- 205 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da------------- 205 (369)
...++||++|+ |-|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL-GC------DLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------CCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------CEEEecccccccccccccccccch
Confidence 45679999995 56777777888764 5888999999999888764 11 11111101110
Q ss_pred -----HHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 206 -----VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 206 -----~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.+.+.+.....+|+||-... .+.++.+.+.|+++|.++...
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEEe
Confidence 12222222346998884221 135778889999999998754
No 398
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.97 E-value=2.9 Score=41.39 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=81.9
Q ss_pred CCCEEEEEeCcccHHHH--HHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCC--------CCCEEEEEcchHHHHh
Q 017607 142 SPKTVLVVGGGDGGVLR--EISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFE--------DPRVRLHIGDAVEFLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~--~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~--------~~rv~v~~~Da~~~l~ 210 (369)
..-++-+||.|.-+++. .+++.. -+|+++|+|++.++..++....... +++ ..++++ ..|..+-+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 34589999999655544 345543 4899999999988876653110000 000 123433 35554443
Q ss_pred hCCCCCccEEEEcCCCCC----CCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCCCeeEEE
Q 017607 211 QVPRGKYDAIIVDSSDPV----GPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAW 286 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~----~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~ 286 (369)
..-|+||+-.+.|. +.+.--+-++.++.+...|++|-+++..+..+ +...+.+.+.+.+.... ..+..
T Consensus 83 ----~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~---pgtt~~l~~~l~e~~~~-~d~~v 154 (446)
T 4a7p_A 83 ----KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP---VGTGDEVERIIAEVAPN-SGAKV 154 (446)
T ss_dssp ----TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC---TTHHHHHHHHHHHHSTT-SCCEE
T ss_pred ----hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC---chHHHHHHHHHHHhCCC-CCceE
Confidence 24799998766653 22211123556778888999988877655322 34455666666666552 44555
Q ss_pred EEEeecc
Q 017607 287 ASVPTYP 293 (369)
Q Consensus 287 ~~vP~~p 293 (369)
.+-|.+-
T Consensus 155 ~~~Pe~a 161 (446)
T 4a7p_A 155 VSNPEFL 161 (446)
T ss_dssp EECCCCC
T ss_pred EeCcccc
Confidence 6667653
No 399
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.86 E-value=1.2 Score=43.11 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=30.0
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKK 184 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~ 184 (369)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 478999999874 3333445555554 79999999887777765
No 400
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.73 E-value=2.2 Score=42.41 Aligned_cols=102 Identities=21% Similarity=0.291 Sum_probs=62.0
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh----------hcC-CCCCCCEEEEEcchHHHH
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPE----------LAV-GFEDPRVRLHIGDAVEFL 209 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~----------~~~-~~~~~rv~v~~~Da~~~l 209 (369)
.++|.+||+|.-+ ++..+++.. .+|+++|++++.++.+++.+.. ... ..+....++ ..|. +-+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 3589999999633 344455543 4899999999998877663321 000 011122333 4553 222
Q ss_pred hhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 210 RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 210 ~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
...|+||.-.+. . .-...++++.+...++|+.+++.++.
T Consensus 113 -----~~aDlVIeaVpe--~---~~~k~~v~~~l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 113 -----STVDLVVEAVFE--D---MNLKKKVFAELSALCKPGAFLCTNTS 151 (463)
T ss_dssp -----TTCSEEEECCCS--C---HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -----CCCCEEEEcCCC--C---HHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 358999976542 1 11235678889999999988887543
No 401
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.68 E-value=3.3 Score=38.87 Aligned_cols=110 Identities=13% Similarity=0.231 Sum_probs=58.3
Q ss_pred CCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.+.+|.+||+|.-+.+.. ++......++..+|++++.++--...+... ..+...++++..++... + ..-|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a-~-----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSD-C-----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGG-G-----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHH-h-----CCCCE
Confidence 356899999875544433 333333468999999986555211111111 01112345665544222 2 24899
Q ss_pred EEEcCCCCCCCccc-----cccHHHH----HHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDPVGPAQE-----LVEKPFF----DTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~~~~~~-----L~~~ef~----~~~~~~LkpgGilv~~~~s~ 260 (369)
||+-...|..+... ..+...+ +.+.+. +|++++++. .+|
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~-tNP 125 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVA-TNP 125 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEEC-SSS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEe-cCc
Confidence 99876555433211 1122233 344444 899999874 455
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.66 E-value=0.94 Score=44.11 Aligned_cols=109 Identities=18% Similarity=0.237 Sum_probs=58.8
Q ss_pred CCCEEEEEeCccc-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC--CCCEEEEE---cc-----hHHHHh
Q 017607 142 SPKTVLVVGGGDG-GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE--DPRVRLHI---GD-----AVEFLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G-~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~--~~rv~v~~---~D-----a~~~l~ 210 (369)
.+.+|++||+|.= ..+..+++..+ .+|+++|.++...+.+++.-... ..++ ........ .+ ....+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~-~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQW-LDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEE-CCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeE-EeccccccccccchhhhhHHHHhhhHHHHH
Confidence 4689999999843 33334444443 48999999999888777631100 0000 00000000 00 011121
Q ss_pred hCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 211 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+. -...|+||.-...|......++++ .+.+.+|||.+++-.+
T Consensus 261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~----emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 261 DA-ITKFDIVITTALVPGRPAPRLVTA----AAATGMQPGSVVVDLA 302 (381)
T ss_dssp HH-HTTCSEEEECCCCTTSCCCCCBCH----HHHHTSCTTCEEEETT
T ss_pred HH-HhcCCEEEECCCCCCcccceeecH----HHHhcCCCCcEEEEEe
Confidence 21 146999996554444444556666 4556789998888543
No 403
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.66 E-value=4.2 Score=38.52 Aligned_cols=105 Identities=14% Similarity=0.139 Sum_probs=57.3
Q ss_pred CCCEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHH----hhchhhcCCCCCCCEEEEEcchHHHHhhCCCC
Q 017607 142 SPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSK----KYFPELAVGFEDPRVRLHIGDAVEFLRQVPRG 215 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar----~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~ 215 (369)
++.+|.+||+|.=+. +..++...-..+++.+|++++.++--. .-++.. ..++++..+|... . .
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~a----~--~ 72 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYED----C--K 72 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGGG----G--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHHH----h--C
Confidence 467999999864222 223344433358999999998665421 112221 2346666666322 2 2
Q ss_pred CccEEEEcCCCCCCCcc---ccc--cHHHHHHHHHh---ccCCceEEecc
Q 017607 216 KYDAIIVDSSDPVGPAQ---ELV--EKPFFDTIAKA---LRPGGVLCNMA 257 (369)
Q Consensus 216 ~fDvIi~D~~~p~~~~~---~L~--~~ef~~~~~~~---LkpgGilv~~~ 257 (369)
..|+||+-...|..+.. .|+ +...++.+.+. ..|++++++.+
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 48999986655544321 122 12233333332 36899887654
No 404
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.56 E-value=0.79 Score=45.24 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=62.7
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEE----cch------HHH
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI----GDA------VEF 208 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~----~Da------~~~ 208 (369)
...++||++|+ |-|.++..+++..+ .++++++.+++-++.+++.-...-....+..+.+.. .|. .+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 45678999995 56777788888764 588888899999998877421100001111110000 011 122
Q ss_pred Hhh-CCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 209 LRQ-VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 209 l~~-~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+.+ .....+|+||- .. + .+.++.+.+.|+++|.++...
T Consensus 306 i~~~t~g~g~Dvvid-~~---G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFE-HP---G-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEE-CS---C-------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEE-cC---C-------chhHHHHHHHhhCCcEEEEEe
Confidence 322 22357998873 22 1 146788899999999998653
No 405
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.23 E-value=0.58 Score=38.82 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=52.9
Q ss_pred CCCEEEEEeCcccHHHHHH---HhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH--HHHhhCCCCC
Q 017607 142 SPKTVLVVGGGDGGVLREI---SRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQVPRGK 216 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l---~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~~~~~ 216 (369)
...+|+++|+|. ++..+ ++..+ .+|+++|.+++.++.+++ ...+.++.+|.. +.+....-..
T Consensus 18 ~~~~v~IiG~G~--iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 18 KSKYIVIFGCGR--LGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCEEEEECCSH--HHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred CCCcEEEECCCH--HHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCccc
Confidence 457899999864 33333 22322 489999999876543221 123455666653 2333321246
Q ss_pred ccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 217 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 217 fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+|+||.-..++. .......+.+.+.+...++....+
T Consensus 85 ad~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 999997543210 112333445555666666654443
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.10 E-value=2.4 Score=37.45 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=59.0
Q ss_pred CCEEEEEeCcccHHHHHHHhcCC--CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchH--HHHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRHDS--VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~--~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~~~~~fD 218 (369)
..+|+++|+| .++..+++... .. |+++|.|++.++.++ . .+.++.+|+. +.++...-...|
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~---------~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR---S---------GANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T---------TCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c---------CCeEEEcCCCCHHHHHhcCcchhc
Confidence 4589999985 66666665421 24 999999998776554 1 3678889986 345443235799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+||+-..+. . .........+.+.|+..++..+.+
T Consensus 74 ~vi~~~~~d---~----~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 74 AVIVDLESD---S----ETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp EEEECCSCH---H----HHHHHHHHHHHHCSSSEEEEECSS
T ss_pred EEEEcCCCc---H----HHHHHHHHHHHHCCCCeEEEEECC
Confidence 999754321 0 112344556667887666655444
No 407
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.97 E-value=1.4 Score=43.19 Aligned_cols=109 Identities=17% Similarity=0.281 Sum_probs=60.7
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCC-----C-CCEEEEE---cch-----H
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-----D-PRVRLHI---GDA-----V 206 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-----~-~rv~v~~---~Da-----~ 206 (369)
.+.+|++||+|. |..+..+++..+ .+|+++|+++...+.+++.-... .... + .....+. .+. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~-~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKF-IAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEE-CCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCce-eecccccccccccccchhhhcchhhhhhhH
Confidence 467999999984 333444555554 58999999999888877631110 0000 0 0000000 000 0
Q ss_pred HHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 207 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 207 ~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.-+.+. -...|+||.-...|......++++ .+.+.+|||.+++-.+
T Consensus 267 ~~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~----emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 267 ALVAEH-IAKQDIVITTALIPGRPAPRLVTR----EMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHH-HHTCSEEEECCCCSSSCCCCCBCH----HHHTTSCTTCEEEETT
T ss_pred hHHHHH-hcCCCEEEECCcCCCCCCCEEecH----HHHhcCCCCCEEEEEe
Confidence 111111 135899997655554455667776 4556789999988543
No 408
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.85 E-value=1.7 Score=42.40 Aligned_cols=42 Identities=17% Similarity=0.257 Sum_probs=30.1
Q ss_pred CCCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 017607 142 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKK 184 (369)
Q Consensus 142 ~p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~ 184 (369)
.+.+|+++|+|. |..+..+++..+ .+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH
Confidence 368999999874 333344555554 489999999988777654
No 409
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.80 E-value=0.37 Score=45.18 Aligned_cols=91 Identities=15% Similarity=0.234 Sum_probs=57.2
Q ss_pred EEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEc-ch-HHHHhhCCCCCccEE
Q 017607 145 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-DA-VEFLRQVPRGKYDAI 220 (369)
Q Consensus 145 ~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-Da-~~~l~~~~~~~fDvI 220 (369)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. + .++.. |. .+.++....+.+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 7999995 56777777887754 4799999988888887763 21 1 11111 11 111222223469988
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|-.. +. +.++.+.+.|+++|.++...
T Consensus 222 id~~----g~-------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPV----GG-------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESC----CT-------HHHHHHHTTEEEEEEEEECC
T ss_pred EECC----cH-------HHHHHHHHhhcCCCEEEEEe
Confidence 7322 11 24778889999999998653
No 410
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.74 E-value=7 Score=36.56 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
.+.+|.+||+|.=+ ++..++......+|+.+|++++..+....-+... ..+....+++..+|. + .. ...|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~-~---al--~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDY-D---DC--RDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCG-G---GT--TTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcH-H---Hh--CCCCE
Confidence 45799999997433 3333434443568999999998555321212111 111123556665442 2 22 34899
Q ss_pred EEEcCCCCCCCc---cccc------cHHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDPVGPA---QELV------EKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~~~~---~~L~------~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
||+-..-+..+. ..+. ..++.+.+.+. .|++++++- .+|
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~-tNP 125 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA-TNP 125 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC-SSS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe-CCc
Confidence 998654443321 1111 13344555554 589987764 344
No 411
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.72 E-value=0.3 Score=46.37 Aligned_cols=96 Identities=13% Similarity=0.040 Sum_probs=55.3
Q ss_pred CCCCEEEEEeC--cccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~--G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++|+ |.|.++..+++.....+|++++ +++-.+.++ +.. +.-+. ...|..+.+++...+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 45679999996 4567777788875556888888 554445544 221 11111 223444444443346799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+|+-.... . .++.+.++|+++|.++...
T Consensus 211 vv~d~~g~---~--------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCG---D--------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCc---h--------hHHHHHHHhhcCCEEEEEC
Confidence 88843211 1 2356778999999998654
No 412
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.62 E-value=0.65 Score=42.23 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=22.3
Q ss_pred CCEEEEEeCcc-cHH-HHHHHhcCCCcEEEEEECCH
Q 017607 143 PKTVLVVGGGD-GGV-LREISRHDSVELIDICEIDK 176 (369)
Q Consensus 143 p~~VLdIG~G~-G~~-~~~l~k~~~~~~V~~VEid~ 176 (369)
..+||+||+|. |.. +..|++. ++.+++.+|.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 46899999873 222 2223344 567999999996
No 413
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.50 E-value=0.89 Score=41.87 Aligned_cols=104 Identities=19% Similarity=0.298 Sum_probs=62.1
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhc------C-CCCC-------CCEEEEEcchH
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELA------V-GFED-------PRVRLHIGDAV 206 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~------~-~~~~-------~rv~v~~~Da~ 206 (369)
.++|.+||+|.-+ ++..+++.. .+|+++|.+++.++.+++.+.... . .+.. .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 3689999998533 333444443 489999999999888776532110 0 0000 12232 34433
Q ss_pred HHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 207 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 207 ~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+.+ ...|+||...+... -...++++.+...++|+.+++.++.+
T Consensus 81 ~~~-----~~aDlVi~av~~~~-----~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 81 QAV-----KDADLVIEAVPESL-----DLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp HHT-----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred HHh-----ccCCEEEEeccCcH-----HHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 332 35899997553211 12456788899999999888865543
No 414
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.40 E-value=0.71 Score=44.22 Aligned_cols=97 Identities=15% Similarity=0.221 Sum_probs=58.6
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++||++| +|-|..+..+++..+ .+|++++ +++-.+.+++. .. +.-+.....|..+.+.+. ..+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~~--~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKSL--KPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHTS--CCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhhc--CCCC
Confidence 3567999999 566777788888765 5888888 66666777553 11 100111112333444332 4699
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||-.... . ...++.+.+.|+++|.++...
T Consensus 251 ~vid~~g~---~------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGG---S------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCT---T------HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCC---h------hhhhHHHHHhhcCCcEEEEeC
Confidence 98843321 1 013456678899999998754
No 415
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.16 E-value=2.5 Score=36.90 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=58.1
Q ss_pred EEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCccEE
Q 017607 145 TVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDAI 220 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~fDvI 220 (369)
+|+++|+| .++..+++. ....+|+++|.|++.++...+.. .+.++.+|+.+ .++...-...|+|
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 68999975 444444432 11357999999999887654321 35688888764 3443323579999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
|+-..+.. ...+.....+.+.+...++..+.+
T Consensus 70 i~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 70 VILTPRDE-------VNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp EECCSCHH-------HHHHHHHHHHHTSCCCEEEECCCS
T ss_pred EEecCCcH-------HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 97543311 123455555666677766654443
No 416
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.74 E-value=4.7 Score=36.01 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=49.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..+.||+.|+++ ++++++++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 6 ~~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 456788888664 466665543 12358999999988777666655443 35788898886432 2111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
. ++.|++|..+.
T Consensus 80 ~~-g~id~lv~nAg 92 (252)
T 3h7a_A 80 AH-APLEVTIFNVG 92 (252)
T ss_dssp HH-SCEEEEEECCC
T ss_pred hh-CCceEEEECCC
Confidence 1 47999997654
No 417
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.54 E-value=12 Score=34.24 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=60.9
Q ss_pred CCCEEEEEeCccc-HHHHH----HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------Hh
Q 017607 142 SPKTVLVVGGGDG-GVLRE----ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G-~~~~~----l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~ 210 (369)
..+.||+.|+++| +++++ +++.. .+|++++.++...+.+++..... .++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4578999997754 34444 44443 57999999976655555443332 3578888886432 21
Q ss_pred hC--CCCCccEEEEcCCCCC-----CCccccc--------------cHHHHHHHHHhccCCceEEec
Q 017607 211 QV--PRGKYDAIIVDSSDPV-----GPAQELV--------------EKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 211 ~~--~~~~fDvIi~D~~~p~-----~~~~~L~--------------~~ef~~~~~~~LkpgGilv~~ 256 (369)
.. .-++.|++|..+.-.. .+..... ...+.+.+...|+++|.++..
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 11 1247999997654321 1111110 122345666677788887754
No 418
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.16 E-value=8.6 Score=33.77 Aligned_cols=78 Identities=12% Similarity=0.132 Sum_probs=49.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
+.++||+.|++ |+++++++++ ....+|++++.++.-.+...+.+... ..++.++..|..+. ++..
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 35678877755 5555555442 12368999999998777666655433 35788888886432 2211
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
..++.|++|..+.
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1247899997654
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.15 E-value=3.5 Score=36.56 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=48.0
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC---CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD---SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~---~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~ 212 (369)
+.++||+.| |+|+++++++++. ...+|++++.++.-.+...+.+... ..++.++..|..+. ++..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 346777776 5567777766531 2358999999987666555544332 34688888886532 1111
Q ss_pred --CCCCccEEEEcCC
Q 017607 213 --PRGKYDAIIVDSS 225 (369)
Q Consensus 213 --~~~~fDvIi~D~~ 225 (369)
.-+..|+||..+.
T Consensus 77 ~~~~g~id~li~~Ag 91 (276)
T 1wma_A 77 RKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 0136999997653
No 420
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.90 E-value=6.5 Score=38.87 Aligned_cols=109 Identities=10% Similarity=0.135 Sum_probs=60.5
Q ss_pred CEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CC-------CCCCEEEEEcchHHHHhhCC
Q 017607 144 KTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GF-------EDPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 144 ~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~-------~~~rv~v~~~Da~~~l~~~~ 213 (369)
.+|.+||+|.=+. +..+++.....+|+++|++++.++..++.-..... ++ ...++++ ..|..+.++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 4899999985443 34455653235799999999988765431100000 00 0013332 344433332
Q ss_pred CCCccEEEEcCCCCCCCcc-------cc-ccHHHHHHHHHhccCCceEEeccc
Q 017607 214 RGKYDAIIVDSSDPVGPAQ-------EL-VEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~~-------~L-~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
..|+||+..+.|..... .+ +-.+..+.+...|++|.+++..+.
T Consensus 82 --~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST 132 (467)
T 2q3e_A 82 --EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST 132 (467)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSC
T ss_pred --cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCc
Confidence 37999987765543211 11 124566778888888777765433
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.88 E-value=7.8 Score=34.52 Aligned_cols=78 Identities=8% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCCEEEEEeCccc-HHHHH----HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH------HHh
Q 017607 142 SPKTVLVVGGGDG-GVLRE----ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE------FLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G-~~~~~----l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~------~l~ 210 (369)
+.++||+.|++++ +++++ +++. ..+|++++.++...+.+++..... ...++.++..|..+ +++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4678999997633 24444 4444 358999998876555555443332 22478888888642 222
Q ss_pred hC--CCCCccEEEEcCC
Q 017607 211 QV--PRGKYDAIIVDSS 225 (369)
Q Consensus 211 ~~--~~~~fDvIi~D~~ 225 (369)
.. .-++.|++|..+.
T Consensus 80 ~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeeEEEEccc
Confidence 11 0147899997653
No 422
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.80 E-value=8.8 Score=34.76 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=48.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..+.||+.|++ |++++++++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 35678888765 4566655543 12368999999998777666655432 35788888886432 2111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 0147899997654
No 423
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.67 E-value=2.5 Score=40.03 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=63.9
Q ss_pred CCCCEEEEEeCcccHHHH--HHHhcCCCcEEEEEECCHHHHHHHHhhchh----h-cCC-CCC--------CCEEEEEcc
Q 017607 141 PSPKTVLVVGGGDGGVLR--EISRHDSVELIDICEIDKMVIDVSKKYFPE----L-AVG-FED--------PRVRLHIGD 204 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~--~l~k~~~~~~V~~VEid~~vi~~ar~~~~~----~-~~~-~~~--------~rv~v~~~D 204 (369)
|...+|-+||+|.=+... .++.+. -+|+.+|++++.++.+++++.. . ..+ +.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 456799999999654433 344443 5799999999998877665432 1 111 111 12332 233
Q ss_pred hHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 205 AVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 205 a~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
..+.+ ...|+||=..+. .--..++.|+++-+.++|+-+|..++.+
T Consensus 81 l~~a~-----~~ad~ViEav~E-----~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 81 LAEAV-----EGVVHIQECVPE-----NLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHHHT-----TTEEEEEECCCS-----CHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred hHhHh-----ccCcEEeecccc-----HHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 33322 347888732221 1123578999999999999999988754
No 424
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.66 E-value=0.65 Score=43.99 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=39.7
Q ss_pred CCCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhchhh
Q 017607 141 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDK---MVIDVSKKYFPEL 189 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~---~vi~~ar~~~~~~ 189 (369)
.....|||--||+|+++.++.+.. .+.+++|+++ ..++++++++...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 456789999999999999998874 6899999999 9999999988654
No 425
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=86.65 E-value=3.6 Score=39.07 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=33.5
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECC-HHHHHHHHhhchh
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEID-KMVIDVSKKYFPE 188 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid-~~vi~~ar~~~~~ 188 (369)
...|+.||||-......+....+ .++.+|+| |++++.-++.++.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~ 142 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRE 142 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhh
Confidence 46899999999999988876533 35566666 8898887777654
No 426
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.39 E-value=2.7 Score=38.81 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh----h-cCC-CCC------------CCEEEEE
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPE----L-AVG-FED------------PRVRLHI 202 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~----~-~~~-~~~------------~rv~v~~ 202 (369)
-++|.+||+|.-+ ++..+++.. .+|+++|++++.++.+++.+.. . ..+ +.. .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 3689999998643 444555553 4899999999988876543221 0 011 111 13443 2
Q ss_pred cchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 203 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 203 ~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.|..+.+ ...|+||.-.+... -...++++.+...++++.+++.++
T Consensus 92 ~~~~~~~-----~~aD~Vi~avp~~~-----~~~~~v~~~l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV-----HSTDLVVEAIVENL-----KVKNELFKRLDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT-----TSCSEEEECCCSCH-----HHHHHHHHHHTTTSCTTCEEEECC
T ss_pred cCHHHhh-----cCCCEEEEcCcCcH-----HHHHHHHHHHHhhCCCCeEEEECC
Confidence 4433222 35899997553211 113467788888888888777544
No 427
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=86.37 E-value=7.2 Score=29.97 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=49.8
Q ss_pred CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHH
Q 017607 166 VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAK 245 (369)
Q Consensus 166 ~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~ 245 (369)
..+|..||-++...+..++.+... +-.+. ...|+.+.++......+|+||+|...|... ..++++.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL-----GATTV-LAADGVDALELLGGFTPDLMICDIAMPRMN-----GLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT-----TCEEE-EESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-----CceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHh
Confidence 458999999999998888877654 12333 466777666554456799999998655322 3467777776
Q ss_pred hccCCceEEe
Q 017607 246 ALRPGGVLCN 255 (369)
Q Consensus 246 ~LkpgGilv~ 255 (369)
. .+...+++
T Consensus 76 ~-~~~~~ii~ 84 (130)
T 3eod_A 76 R-GDQTPVLV 84 (130)
T ss_dssp T-TCCCCEEE
T ss_pred c-CCCCCEEE
Confidence 4 34444443
No 428
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.30 E-value=9.4 Score=35.65 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=55.6
Q ss_pred EEEEEeCcccHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 145 TVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 145 ~VLdIG~G~G~~~--~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+|.+||+|.-+.+ ..+++.....+|+++|++++.++.....+..... + ....++...|. + .. ...|+||+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~-~~~~~i~~~d~-~---~~--~~aDvVii 73 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-F-TRRANIYAGDY-A---DL--KGSDVVIV 73 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-G-SCCCEEEECCG-G---GG--TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-h-cCCcEEEeCCH-H---Hh--CCCCEEEE
Confidence 6899999754433 3344443334899999999877654432211100 0 02234444452 2 22 35899998
Q ss_pred cCCCCCCCcc---ccc------cHHHHHHHHHhccCCceEEec
Q 017607 223 DSSDPVGPAQ---ELV------EKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 223 D~~~p~~~~~---~L~------~~ef~~~~~~~LkpgGilv~~ 256 (369)
-...+..+.. .+. -.++++.+.+. .|++++++-
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 7665443311 111 13455555555 589987763
No 429
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.20 E-value=0.82 Score=42.86 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=23.6
Q ss_pred CCEEEEEeCcc-cHHH-HHHHhcCCCcEEEEEECCH
Q 017607 143 PKTVLVVGGGD-GGVL-REISRHDSVELIDICEIDK 176 (369)
Q Consensus 143 p~~VLdIG~G~-G~~~-~~l~k~~~~~~V~~VEid~ 176 (369)
..+||+||+|. |+.+ ..|++. ++.+++.+|-|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46999999883 4333 334444 588999999886
No 430
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.91 E-value=18 Score=33.21 Aligned_cols=95 Identities=18% Similarity=0.237 Sum_probs=55.2
Q ss_pred cCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHHHh---cCCCcEEEEEECCHHHHHHHHhhchhhcC
Q 017607 115 DGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISR---HDSVELIDICEIDKMVIDVSKKYFPELAV 191 (369)
Q Consensus 115 Dg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l~k---~~~~~~V~~VEid~~vi~~ar~~~~~~~~ 191 (369)
||.+.-...|-.-+.+.|..... ....++||++|+| +.++.++. ..+..+|++++.+++-.+...+.+...
T Consensus 100 ~g~l~G~NTD~~G~~~~L~~~~~--~l~~k~vlvlGaG--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~-- 173 (281)
T 3o8q_A 100 DGEILGDNTDGEGLVQDLLAQQV--LLKGATILLIGAG--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY-- 173 (281)
T ss_dssp TSCEEEECCHHHHHHHHHHHTTC--CCTTCEEEEECCS--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--
T ss_pred CCcEEEEecHHHHHHHHHHHhCC--CccCCEEEEECch--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--
Confidence 56666666776666666654321 1256799999986 34444332 234468999999987665544444322
Q ss_pred CCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCC
Q 017607 192 GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSD 226 (369)
Q Consensus 192 ~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 226 (369)
..+....- .+.. ..+|+||.-.+.
T Consensus 174 ----~~~~~~~~------~~l~-~~aDiIInaTp~ 197 (281)
T 3o8q_A 174 ----GEVKAQAF------EQLK-QSYDVIINSTSA 197 (281)
T ss_dssp ----SCEEEEEG------GGCC-SCEEEEEECSCC
T ss_pred ----CCeeEeeH------HHhc-CCCCEEEEcCcC
Confidence 13444321 1222 469999965443
No 431
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.86 E-value=1.6 Score=39.61 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=23.1
Q ss_pred CCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCH
Q 017607 143 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDK 176 (369)
Q Consensus 143 p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~ 176 (369)
..+||++|+|. |......+...++.+++.+|-|.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 56999999874 43333333334678999999873
No 432
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=85.81 E-value=3.4 Score=38.83 Aligned_cols=109 Identities=19% Similarity=0.202 Sum_probs=52.1
Q ss_pred CCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
++.+|.+||+|.=+.+.. ++......+|+.+|++++.++--...+.... .+. .++++..+|- + .. ..-|+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~-~~~~i~~~~~-~---a~--~~aDv 77 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-PFM-GQMSLYAGDY-S---DV--KDCDV 77 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-CCT-TCEEEC--CG-G---GG--TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc-CCeEEEECCH-H---Hh--CCCCE
Confidence 456899999864333322 3333334589999999875542111111110 111 3566655442 2 22 34899
Q ss_pred EEEcCCCCCCCcc---cc--cc----HHHHHHHHHhccCCceEEeccccc
Q 017607 220 IIVDSSDPVGPAQ---EL--VE----KPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~~~~~---~L--~~----~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
||+-...|..+.. .+ .+ .++.+.+.+. +|++++++. .+|
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~-tNP 125 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV-SNP 125 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC-SSS
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe-cCc
Confidence 9986655443321 11 11 2344444444 699998874 454
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.78 E-value=3.4 Score=37.45 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=54.0
Q ss_pred CEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCC-CccEE
Q 017607 144 KTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRG-KYDAI 220 (369)
Q Consensus 144 ~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~-~fDvI 220 (369)
++|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. . .. . ....|..+.+ . ..|+|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g-----~~-~---~~~~~~~~~~-----~~~aDvV 66 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-G-----II-D---EGTTSIAKVE-----DFSPDFV 66 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-T-----SC-S---EEESCGGGGG-----GTCCSEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-C-----Cc-c---cccCCHHHHh-----cCCCCEE
Confidence 379999988533 333344433123799999999988776542 1 00 0 1123433322 2 58999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~ 256 (369)
++-.+.. ...+.++.+...|+++.+++..
T Consensus 67 ilavp~~-------~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 67 MLSSPVR-------TFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp EECSCHH-------HHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEcCCHH-------HHHHHHHHHHhhCCCCcEEEEC
Confidence 9754321 1346777888889988876653
No 434
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=85.68 E-value=22 Score=39.96 Aligned_cols=151 Identities=13% Similarity=0.118 Sum_probs=89.2
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhh-----------
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ----------- 211 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~----------- 211 (369)
.-+|+|+-+|.|++..-+.+.+-...+.++|+|+..++.-+.+++ ...++.+|..+++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhhh
Confidence 458999999999999888766412568899999999999888875 345777887765421
Q ss_pred --CC-CCCccEEEEcCCCCC-CCccc------------cccHHHHHHHHHhccCCceEEecccccch--hhhHHHHHHHH
Q 017607 212 --VP-RGKYDAIIVDSSDPV-GPAQE------------LVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISI 273 (369)
Q Consensus 212 --~~-~~~fDvIi~D~~~p~-~~~~~------------L~~~ef~~~~~~~LkpgGilv~~~~s~~~--~~~~~~~i~~~ 273 (369)
.+ .+.+|+|+-..+... ..+.. |+ .+|+ .+.+.++|.-+++=++..... ....+..+++.
T Consensus 922 ~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~-~~~l-riv~~~rPk~fv~ENV~glls~~~g~~~~~il~~ 999 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFL-SYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRC 999 (1330)
T ss_dssp CBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHH-HHHH-HHHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHH
T ss_pred hhccccCccceEEecCCCcccccccccccccccchhhHHH-HHHH-HHHHHhcCcEEEEeccHHHhccCccHHHHHHHHH
Confidence 11 135899996544322 21211 11 2344 444568898776644433222 22356666666
Q ss_pred HHHHCCCCeeEEEEEEeeccC---CcEEEEEeecC
Q 017607 274 CRETFKGSVHYAWASVPTYPS---GIIGFLICSTE 305 (369)
Q Consensus 274 l~~~F~~~v~~~~~~vP~~p~---g~w~f~~ask~ 305 (369)
+.+. ...+.+....-..|.- -.-.|++|.+.
T Consensus 1000 L~~l-GY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 1000 LVRM-GYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HHHH-TCEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred HHhc-CCeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 6654 1133433333233311 13578888764
No 435
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.64 E-value=6.4 Score=35.15 Aligned_cols=77 Identities=17% Similarity=0.252 Sum_probs=48.9
Q ss_pred CCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC--
Q 017607 143 PKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 212 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~-- 212 (369)
.++||+.|++ |++++++++. ....+|++++.+++-++.+.+.+... ..++.++..|..+. ++..
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4677777755 5566665543 12368999999998887766655432 35788888886432 2111
Q ss_pred CCCCccEEEEcCC
Q 017607 213 PRGKYDAIIVDSS 225 (369)
Q Consensus 213 ~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0146899997654
No 436
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.58 E-value=3.5 Score=40.93 Aligned_cols=72 Identities=15% Similarity=0.292 Sum_probs=51.4
Q ss_pred CCCCEEEEEeCcccHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCc
Q 017607 141 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~~~~l~k~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~f 217 (369)
...++|+++|+|. ++..+++. ....+|..+|.|++-.+...+.+ ++..+++||+.+ .|.+..-+..
T Consensus 233 ~~~~~v~I~GgG~--ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGN--IGASLAKRLEQTYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSH--HHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchH--HHHHHHHHhhhcCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 3467999999885 34444432 22358999999999888777665 367899999964 5665434679
Q ss_pred cEEEEc
Q 017607 218 DAIIVD 223 (369)
Q Consensus 218 DvIi~D 223 (369)
|+++.-
T Consensus 302 D~~ia~ 307 (461)
T 4g65_A 302 DVFIAL 307 (461)
T ss_dssp SEEEEC
T ss_pred cEEEEc
Confidence 999964
No 437
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.46 E-value=8.7 Score=35.26 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=50.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..+.||+.|++ |++++++++. ....+|++++.+++-++.+.+.+... ..++.++..|..+. ++..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45678888766 4566665543 12368999999998887776665443 35788888886532 2111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-+..|++|..+.
T Consensus 104 ~~~g~id~lvnnAg 117 (301)
T 3tjr_A 104 RLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 0147999997654
No 438
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.45 E-value=10 Score=34.64 Aligned_cols=110 Identities=20% Similarity=0.251 Sum_probs=60.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHH-HHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKM-VIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~-vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~ 212 (369)
..++||+.|++ |++++++++.. ...+|++++.++. ..+...+..... ..++.++..|..+. ++..
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 35678888765 45666655431 2368999998865 334444333322 35788898886532 2111
Q ss_pred --CCCCccEEEEcCCCC--CCCccccc--------------cHHHHHHHHHhccCCceEEecc
Q 017607 213 --PRGKYDAIIVDSSDP--VGPAQELV--------------EKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 213 --~~~~fDvIi~D~~~p--~~~~~~L~--------------~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.-++.|++|..+... ..+...+- .....+.+...|+++|.++..+
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 014799999765321 11111110 1223455666777888877543
No 439
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.33 E-value=1.7 Score=40.43 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=56.9
Q ss_pred CCCCEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCCCCCc
Q 017607 141 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKY 217 (369)
Q Consensus 141 ~~p~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~~~~f 217 (369)
...++||++| +|-|..+..+++..+. +|+++.- ++-.+.+++.-. + .++..+-.+ +.+.. ..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~-~~~~~~~~~lGa-------~---~~i~~~~~~~~~~~~--~g~ 216 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTAS-KRNHAFLKALGA-------E---QCINYHEEDFLLAIS--TPV 216 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEEC-HHHHHHHHHHTC-------S---EEEETTTSCHHHHCC--SCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEec-cchHHHHHHcCC-------C---EEEeCCCcchhhhhc--cCC
Confidence 4567999997 5567788888888654 7888874 444777766311 1 122211112 22222 469
Q ss_pred cEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 218 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 218 DvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
|+|+- .. +. +.++.+.++|+++|.++...
T Consensus 217 D~v~d-~~---g~-------~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVID-LV---GG-------DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEE-SS---CH-------HHHHHHGGGEEEEEEEEECC
T ss_pred CEEEE-CC---Cc-------HHHHHHHHhccCCCEEEEeC
Confidence 98873 22 11 23478889999999998753
No 440
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.20 E-value=8.9 Score=34.14 Aligned_cols=78 Identities=19% Similarity=0.257 Sum_probs=49.2
Q ss_pred CCCEEEEEeC-cccH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------Hhh
Q 017607 142 SPKTVLVVGG-GDGG---VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ 211 (369)
Q Consensus 142 ~p~~VLdIG~-G~G~---~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~ 211 (369)
+.++||+.|+ |.|. +++.+++. ..+|++++.+++-++...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4578998887 4432 33334444 368999999998877666655432 235799999986432 211
Q ss_pred C--CCCCccEEEEcCC
Q 017607 212 V--PRGKYDAIIVDSS 225 (369)
Q Consensus 212 ~--~~~~fDvIi~D~~ 225 (369)
. .-++.|++|..+.
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1 0146899997654
No 441
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=84.98 E-value=4.4 Score=37.93 Aligned_cols=94 Identities=17% Similarity=0.094 Sum_probs=59.0
Q ss_pred CCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~fD 218 (369)
.++|+++|+ |..++.+++.. ... |+++|.|++.++ +++ ..+.++.+|+.+ .+++..-+..|
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGAR 179 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhcc
Confidence 457999997 46667766542 234 999999999887 553 247889999864 45544346799
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
.|++...+. . ..-..-...+.+.|+..++..+.
T Consensus 180 ~vi~~~~~d---~----~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 180 AVIVDLESD---S----ETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp EEEECCSSH---H----HHHHHHHHHHTTCTTSEEEEECS
T ss_pred EEEEcCCcc---H----HHHHHHHHHHHHCCCCeEEEEEC
Confidence 999754321 0 11123345566777766655443
No 442
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=84.97 E-value=7.4 Score=36.53 Aligned_cols=110 Identities=15% Similarity=0.241 Sum_probs=55.9
Q ss_pred CCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+..+|.+||+|.=+.+.. ++...-..++..+|++++.++....-+.... .+. .++++..++-.. . ..-|+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~-~~~~v~~~~~~a----~--~~aDv 75 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-AFT-APKKIYSGEYSD----C--KDADL 75 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-GGS-CCCEEEECCGGG----G--TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-Hhc-CCeEEEECCHHH----h--CCCCE
Confidence 346899999864333322 2333335689999999877663222222111 111 355666544222 2 24799
Q ss_pred EEEcCCCCCCCc---ccc--ccHHHHHHHHHh---ccCCceEEeccccc
Q 017607 220 IIVDSSDPVGPA---QEL--VEKPFFDTIAKA---LRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~~~~---~~L--~~~ef~~~~~~~---LkpgGilv~~~~s~ 260 (369)
||+-...|..+. ..+ .+...++.+.+. ..|+|++++. .+|
T Consensus 76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNP 123 (318)
T 1ez4_A 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA-ANP 123 (318)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC-SSS
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe-CCc
Confidence 997665443331 112 122334433332 3799999874 444
No 443
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.89 E-value=13 Score=33.36 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=46.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECC------------HHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEID------------KMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid------------~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
..++||+.|++ |++++++++. ....+|++++.+ .+-++.+.+.+... ..++.++..|..+
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-----CCceEEEEccCCC
Confidence 45678888765 4566665543 123689999987 55555554444332 3578888888643
Q ss_pred H------HhhC--CCCCccEEEEcCC
Q 017607 208 F------LRQV--PRGKYDAIIVDSS 225 (369)
Q Consensus 208 ~------l~~~--~~~~fDvIi~D~~ 225 (369)
. ++.. .-++.|++|..+.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 2 2111 0147999997653
No 444
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.85 E-value=11 Score=35.74 Aligned_cols=108 Identities=19% Similarity=0.254 Sum_probs=56.3
Q ss_pred CCCCEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
.++.+|.+||+|.=+. +..++...-..+++.+|++++.++--..-+.... .+. .++++..+|... . ...|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a----~--~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD----A--KDAD 78 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG----G--TTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH----h--cCCC
Confidence 4567999999764222 2223344434589999999887663322222211 111 356666665332 2 3489
Q ss_pred EEEEcCCCCCCC---cccccc------HHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGP---AQELVE------KPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~---~~~L~~------~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||+-...|..+ ...|+. .++.+.+.+ ..|++++++.+
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvt 125 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAA 125 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEcc
Confidence 999865544333 122332 233334443 46899887654
No 445
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=84.55 E-value=1.5 Score=42.64 Aligned_cols=48 Identities=15% Similarity=0.301 Sum_probs=37.6
Q ss_pred CCCCCEEEEEeCcccHHHHHHHhcC-------CCcEEEEEECCHHHHHHHHhhch
Q 017607 140 IPSPKTVLVVGGGDGGVLREISRHD-------SVELIDICEIDKMVIDVSKKYFP 187 (369)
Q Consensus 140 ~~~p~~VLdIG~G~G~~~~~l~k~~-------~~~~V~~VEid~~vi~~ar~~~~ 187 (369)
.|.+-.|+++|.|.|.++..+++.. ...+++.||+++...+.-++.+.
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3455689999999999998887631 23489999999999887776664
No 446
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=84.33 E-value=10 Score=35.36 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=55.9
Q ss_pred EEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHH-HHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEE
Q 017607 145 TVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDV-SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 221 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~-ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 221 (369)
+|.+||+|.=+.+.. ++......++..+|++++.++. +.. +.... .+. .++++..+|-.. . ..-|+||
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~d-l~~~~-~~~-~~~~v~~~~~~a----~--~~aD~Vi 72 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAED-ILHAT-PFA-HPVWVWAGSYGD----L--EGARAVV 72 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH-HHTTG-GGS-CCCEEEECCGGG----G--TTEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHH-HHHhH-hhc-CCeEEEECCHHH----h--CCCCEEE
Confidence 789999864333322 3334445689999999876663 222 21110 111 345665555222 2 3489999
Q ss_pred EcCCCCCCCcc---c--cccHHHH----HHHHHhccCCceEEeccccc
Q 017607 222 VDSSDPVGPAQ---E--LVEKPFF----DTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 222 ~D~~~p~~~~~---~--L~~~ef~----~~~~~~LkpgGilv~~~~s~ 260 (369)
+-...|..+.. . ..+...+ +.+.+. .|+|++++. .+|
T Consensus 73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~-tNP 118 (310)
T 2xxj_A 73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVA-TNP 118 (310)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSS
T ss_pred ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEe-cCc
Confidence 86654443321 1 1112233 333333 799998874 444
No 447
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=84.32 E-value=22 Score=37.44 Aligned_cols=55 Identities=18% Similarity=0.178 Sum_probs=40.7
Q ss_pred CEEEEEeCcccHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH
Q 017607 144 KTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 207 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~-----~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 207 (369)
-+|+||=||.|++..-+.+.. ...-+.++|+|+.+++.-+.+++ ...++.+|..+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---------~~~~~~~di~~ 272 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---------QTEVRNEKADE 272 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---------TSEEEESCHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---------CCceecCcHHH
Confidence 379999999999887765532 13567899999999999988875 34455555543
No 448
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.27 E-value=21 Score=32.05 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=59.1
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECC-HHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEID-KMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid-~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~ 212 (369)
..+.||+.|++ |++++++++.. ...+|++++.+ .+..+...+.+... ..++.++..|..+. ++..
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 45678888865 45666655431 23578888664 34444444444332 35788888886432 2111
Q ss_pred --CCCCccEEEEcCCCCC-CCccccc--------------cHHHHHHHHHhccCCceEEec
Q 017607 213 --PRGKYDAIIVDSSDPV-GPAQELV--------------EKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 213 --~~~~fDvIi~D~~~p~-~~~~~L~--------------~~ef~~~~~~~LkpgGilv~~ 256 (369)
.-++.|++|..+.... .+....- .....+.+...|+++|.++..
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0147999997653211 1111100 112345666777888877754
No 449
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.26 E-value=3.5 Score=35.46 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=55.5
Q ss_pred EEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 145 TVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+||+.|+ +|.+++.+++. ....+|+++.-++.-.+.. . .++++++.+|..+.-... -+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--------~~~~~~~~~D~~d~~~~~-~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L--------GATVATLVKEPLVLTEAD-LDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T--------CTTSEEEECCGGGCCHHH-HTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c--------CCCceEEecccccccHhh-cccCCEEEE
Confidence 6888884 46666665543 1235899999987654321 1 257889999976531111 136899997
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCC-ceEEec
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNM 256 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~Lkpg-Gilv~~ 256 (369)
.+...+.+............+.+.++.. +.++..
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 6544322211111233445555555543 455543
No 450
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=84.25 E-value=15 Score=35.89 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=59.3
Q ss_pred EEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCC--------CCCEEEEEcchHHHHhhCC
Q 017607 145 TVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFE--------DPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 145 ~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~--------~~rv~v~~~Da~~~l~~~~ 213 (369)
+|.+||+|.=+. +..+++.. .+|+++|++++.++..++.-..... +++ ..++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 689999985443 34445543 4799999999988876652110000 000 113432 344433332
Q ss_pred CCCccEEEEcCCCCCCC---ccccccHHHHHHHHHhccC---CceEEecc
Q 017607 214 RGKYDAIIVDSSDPVGP---AQELVEKPFFDTIAKALRP---GGVLCNMA 257 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~---~~~L~~~ef~~~~~~~Lkp---gGilv~~~ 257 (369)
..|+||+..+.|... +.--+..+.++.+...|++ +.+++..+
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 479999877655421 1111234567788888988 66666443
No 451
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.12 E-value=3 Score=39.19 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=68.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCCCCCcc--
Q 017607 142 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYD-- 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~~~~fD-- 218 (369)
.++.|++||||-=..+..+.. +...++.=|| .|++++..++.+...+. ....+.+++..|.++ ++.......||
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~-~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGV-TPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTC-CCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCC-CCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 356899999998777655542 2335677777 59999998888864321 124678899999874 33221111232
Q ss_pred ---EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 219 ---AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 219 ---vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
++++......-+.. -...+++.+.+.+.||+.++....+
T Consensus 179 ~Pt~~i~Egvl~Yl~~~--~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPAT--AQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHH--HHHHHHHHHHHhCCCCeEEEEEecC
Confidence 34433222111111 1356788888888899988875433
No 452
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.93 E-value=4.2 Score=39.11 Aligned_cols=116 Identities=7% Similarity=0.093 Sum_probs=73.1
Q ss_pred CCEEEEEeCcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 143 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
..+||+|+-+-|.++..++.+. ++.+.=+-..-...+.++..+ +++..++++... ++. ....||+|++
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~--~~~~~~~~~~~~-----~~~-~~~~~~~v~~ 106 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLN--GIDESSVKFLDS-----TAD-YPQQPGVVLI 106 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHT--TCCGGGSEEEET-----TSC-CCSSCSEEEE
T ss_pred CCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHc--CCCccceEeccc-----ccc-cccCCCEEEE
Confidence 4679999999999998887653 345543444444556666654 233344665532 222 2467999998
Q ss_pred cCCCCCCCccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCC
Q 017607 223 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 279 (369)
Q Consensus 223 D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~ 279 (369)
-.+..... -...+..+...|++|+.+++...+. .....+.+.+.+.|.
T Consensus 107 ~lpk~~~~-----l~~~L~~l~~~l~~~~~i~~~g~~~----~~~~~~~~~l~~~~~ 154 (375)
T 4dcm_A 107 KVPKTLAL-----LEQQLRALRKVVTSDTRIIAGAKAR----DIHTSTLELFEKVLG 154 (375)
T ss_dssp ECCSCHHH-----HHHHHHHHHTTCCTTSEEEEEEEGG----GCCHHHHHHHHHHTC
T ss_pred EcCCCHHH-----HHHHHHHHHhhCCCCCEEEEEeccc----chHHHHHHHHHhhcC
Confidence 66532211 2346788899999999887654332 233566677777776
No 453
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.86 E-value=8 Score=36.44 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=56.3
Q ss_pred CCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
+..+|.+||+|.=+.+.. ++...-..++..+|++++.++-...-+.... .+. .++++..++-.. + ..-|+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~-~~~~i~~~~~~a-~-----~~aDv 79 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-PFT-SPKKIYSAEYSD-A-----KDADL 79 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG-G-----GGCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-Hhc-CCeEEEECCHHH-h-----CCCCE
Confidence 456899999864333322 2333335689999999876654222222111 111 355666544222 2 24799
Q ss_pred EEEcCCCCCCCcc---cc--ccHHHHHHHHHh---ccCCceEEeccccc
Q 017607 220 IIVDSSDPVGPAQ---EL--VEKPFFDTIAKA---LRPGGVLCNMAESM 260 (369)
Q Consensus 220 Ii~D~~~p~~~~~---~L--~~~ef~~~~~~~---LkpgGilv~~~~s~ 260 (369)
||+-...|..+.. .+ .+...++.+.+. ..|+|++++. .+|
T Consensus 80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNP 127 (326)
T 2zqz_A 80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA-ANP 127 (326)
T ss_dssp EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC-SSS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe-CCc
Confidence 9976654443311 11 122333333332 2799999874 444
No 454
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.62 E-value=8.9 Score=34.20 Aligned_cols=78 Identities=15% Similarity=0.197 Sum_probs=49.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..++||+.|++ |++++++++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 34678877754 5666666553 12358999999998877766655443 35788888886432 1111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1146999997654
No 455
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=83.59 E-value=8.9 Score=34.74 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=48.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..++||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678888765 45666655431 2368999999987776665555433 35788888886432 2211
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0147999997654
No 456
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.58 E-value=18 Score=32.21 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=49.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..+.||+.|++.| +++++++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4567888887654 55554442 12368999999998877666655443 35788888886432 2111
Q ss_pred -CCCCccEEEEcC
Q 017607 213 -PRGKYDAIIVDS 224 (369)
Q Consensus 213 -~~~~fDvIi~D~ 224 (369)
.-++.|++|..+
T Consensus 84 ~~~g~id~lv~nA 96 (264)
T 3ucx_A 84 KAYGRVDVVINNA 96 (264)
T ss_dssp HHTSCCSEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 124799999775
No 457
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.56 E-value=5.1 Score=37.46 Aligned_cols=100 Identities=17% Similarity=0.248 Sum_probs=54.3
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+|-+||+|..+ ++..++......+|+.+|++++....+..... . ..++++.. .|. + .. ..-|+|
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~----~~~~i~~t-~d~-~---~l--~~aD~V 81 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-F----NLPNVEIS-KDL-S---AS--AHSKVV 81 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-H----TCTTEEEE-SCG-G---GG--TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-h----cCCCeEEe-CCH-H---HH--CCCCEE
Confidence 4689999999533 66666665545689999999863333333221 1 12467663 663 2 22 248999
Q ss_pred EEcCCCCCCCcc---ccc------cHHHHHHHHHhccCCceEEec
Q 017607 221 IVDSSDPVGPAQ---ELV------EKPFFDTIAKALRPGGVLCNM 256 (369)
Q Consensus 221 i~D~~~p~~~~~---~L~------~~ef~~~~~~~LkpgGilv~~ 256 (369)
|.-...+ .+.. .+. -.++++.+.+. .|++++++-
T Consensus 82 i~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~ 124 (303)
T 2i6t_A 82 IFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVLLVA 124 (303)
T ss_dssp EECCCC-----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEC
T ss_pred EEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEc
Confidence 9755332 1110 011 23455566655 499998763
No 458
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.56 E-value=2.6 Score=39.71 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=62.8
Q ss_pred CCEEEEEeCcc--cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchh----h-cCCCCC---------CCEEEEEcchH
Q 017607 143 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE----L-AVGFED---------PRVRLHIGDAV 206 (369)
Q Consensus 143 p~~VLdIG~G~--G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~----~-~~~~~~---------~rv~v~~~Da~ 206 (369)
.++|-+||+|. ++++..+++.. -+|+++|++++.++.+++.... . ..++-. .++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 46899999985 34445556553 4799999999999887654211 1 011111 134432 4443
Q ss_pred HHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 207 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 207 ~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
+.+ ...|+||...+. . .-...++|+.+...++|+-+++.++.
T Consensus 83 eav-----~~aDlVieavpe--~---~~~k~~v~~~l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV-----EGVVHIQECVPE--N---LDLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT-----TTEEEEEECCCS--C---HHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred HHH-----hcCCEEEEeccC--C---HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 332 358999975532 1 11245688889999999888876543
No 459
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.54 E-value=16 Score=34.56 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=58.8
Q ss_pred CCCEEEEEeCcccHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEE-EcchHHHHhhCCCCCcc
Q 017607 142 SPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~--~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~-~~Da~~~l~~~~~~~fD 218 (369)
++.+|.+||+|.-+. +..++...-..+++.+|++++.++--..-+.... .+.. ...++ ..|.. .. ...|
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~-~~~~-~~~i~~~~d~~----~~--~~aD 89 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS-LFLK-TPKIVSSKDYS----VT--ANSK 89 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG-GGCS-CCEEEECSSGG----GG--TTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh-hccC-CCeEEEcCCHH----Hh--CCCC
Confidence 467999999975333 4445555444589999999876553222222110 1111 22333 34532 22 3589
Q ss_pred EEEEcCCCCCCC---cccccc------HHHHHHHHHhccCCceEEecc
Q 017607 219 AIIVDSSDPVGP---AQELVE------KPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 219 vIi~D~~~p~~~---~~~L~~------~ef~~~~~~~LkpgGilv~~~ 257 (369)
+||+-...|..+ -..|+. .++.+.+.+. .|++++++.+
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt 136 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS 136 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 998765544433 122332 3444555554 8999988754
No 460
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=83.52 E-value=0.78 Score=38.09 Aligned_cols=75 Identities=13% Similarity=0.157 Sum_probs=46.3
Q ss_pred CHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH-HHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceE
Q 017607 175 DKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 253 (369)
Q Consensus 175 d~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~-~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGil 253 (369)
+|+.++.++.-+... .+..+..+.-|-.. -+-..+..+||+|+.=. ++.+ ...++.+..+..+...|+|||.|
T Consensus 21 ~pe~le~~k~~~~~~----~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt-~~~~-~~~~l~r~li~~l~~aLkpgG~L 94 (136)
T 2km1_A 21 TPELVENTKAQAASK----KVKFVDQFLINKLNDGSITLENAKYETVHYLT-PEAQ-TDIKFPKKLISVLADSLKPNGSL 94 (136)
T ss_dssp SHHHHHHHHHHHHHT----TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEEC-CCSS-CSCCCCHHHHHHHHTTCCTTCCE
T ss_pred CHHHHHHHHHhhhcc----ccchhhHHHHHHHhcCcccCCcccccEEEEec-CCcc-chhhcCHHHHHHHHHHhCCCCEE
Confidence 567777776654431 11234555444221 11234668999998632 2222 23567789999999999999999
Q ss_pred Ee
Q 017607 254 CN 255 (369)
Q Consensus 254 v~ 255 (369)
..
T Consensus 95 ~g 96 (136)
T 2km1_A 95 IG 96 (136)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 461
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=83.43 E-value=16 Score=32.70 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=48.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH------HHhhCC
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE------FLRQVP 213 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~------~l~~~~ 213 (369)
+.++||+.|++ |++++++++. ....+|++++.+++-++...+.+.... .+.++..+..|..+ .++..
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~- 83 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY---PDAILQPVVADLGTEQGCQDVIEKY- 83 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC---TTCEEEEEECCTTSHHHHHHHHHHC-
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---CCceEEEEecCCCCHHHHHHHHHhc-
Confidence 45678877755 5566665543 123689999999887766555443321 13467778888642 23332
Q ss_pred CCCccEEEEcCC
Q 017607 214 RGKYDAIIVDSS 225 (369)
Q Consensus 214 ~~~fDvIi~D~~ 225 (369)
++.|++|..+.
T Consensus 84 -g~id~lv~nAg 94 (267)
T 3t4x_A 84 -PKVDILINNLG 94 (267)
T ss_dssp -CCCSEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 47999997654
No 462
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.17 E-value=18 Score=32.05 Aligned_cols=75 Identities=16% Similarity=0.223 Sum_probs=46.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..++||+.|++ |++++++++. ....+|++++.+++-.+...+.+ ..++.++..|..+. ++..
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 45678888755 5566665543 12358999999988766554433 24678888886432 2111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 78 ~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 78 EHAGGLDILVNNAA 91 (259)
T ss_dssp HHSSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1247999997654
No 463
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.09 E-value=7.2 Score=38.38 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=73.7
Q ss_pred CCCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CCC--------CCCEEEEEcchHHHHh
Q 017607 142 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFE--------DPRVRLHIGDAVEFLR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~--------~~rv~v~~~Da~~~l~ 210 (369)
...+.-+||.|.=++... +++.. -+|+++|+|++.++..++--..... +++ ..++.+- .|
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td------ 80 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT------ 80 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS------
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc------
Confidence 466899999996655543 45553 5899999999999877653110000 000 1223222 12
Q ss_pred hCCCCCccEEEEcCCCCCCC-----ccccccHHHHHHHHHhccCCceEEecccccchhhhHHHHHHHHHHHHCCC--Cee
Q 017607 211 QVPRGKYDAIIVDSSDPVGP-----AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG--SVH 283 (369)
Q Consensus 211 ~~~~~~fDvIi~D~~~p~~~-----~~~L~~~ef~~~~~~~LkpgGilv~~~~s~~~~~~~~~~i~~~l~~~F~~--~v~ 283 (369)
...-|+||+..+.|... +.--+-....+.+.+.|++|-+++..+..+ +...+++.+.+.+.-.. ...
T Consensus 81 ---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~---pgtt~~v~~~i~e~~g~~~~~d 154 (431)
T 3ojo_A 81 ---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA---PKTMDDFVKPVIENLGFTIGED 154 (431)
T ss_dssp ---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC---TTHHHHTHHHHHHTTTCCBTTT
T ss_pred ---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC---hhHHHHHHHHHHHHcCCCcCCC
Confidence 12479999887776521 111111334567778899888777655433 23445554444332221 123
Q ss_pred EEEEEEeec
Q 017607 284 YAWASVPTY 292 (369)
Q Consensus 284 ~~~~~vP~~ 292 (369)
+...+-|.+
T Consensus 155 ~~v~~~Pe~ 163 (431)
T 3ojo_A 155 IYLVHCPER 163 (431)
T ss_dssp EEEEECCCC
T ss_pred eEEEECCCc
Confidence 455666755
No 464
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=82.98 E-value=5.3 Score=39.02 Aligned_cols=45 Identities=11% Similarity=-0.003 Sum_probs=36.0
Q ss_pred CEEEEEeCcccHHHHHHHhcCC-CcE----EEEEECCHHHHHHHHhhchh
Q 017607 144 KTVLVVGGGDGGVLREISRHDS-VEL----IDICEIDKMVIDVSKKYFPE 188 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~~~-~~~----V~~VEid~~vi~~ar~~~~~ 188 (369)
-+||++-||.|+....+.+... .+- |.++|+|+..++.-+.+++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4899999999999988766431 123 88899999999998888764
No 465
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.96 E-value=13 Score=28.03 Aligned_cols=68 Identities=24% Similarity=0.273 Sum_probs=41.6
Q ss_pred CCEEEEEeCcccHHHHHHHh---cCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCc
Q 017607 143 PKTVLVVGGGDGGVLREISR---HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 217 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k---~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~f 217 (369)
.++|+++|+ |.+++.+++ ..+..+|++++.++.-++..+. ..+.++..|..+ .+.+.- ..+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~-~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKAL-GGF 70 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHT-TTC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHH-cCC
Confidence 358999998 455554433 2233689999999987765541 245566666542 222221 369
Q ss_pred cEEEEcC
Q 017607 218 DAIIVDS 224 (369)
Q Consensus 218 DvIi~D~ 224 (369)
|+||...
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9999644
No 466
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.94 E-value=8.5 Score=34.25 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=47.6
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------Hhh--
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ-- 211 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~-- 211 (369)
..++||+.|++ |++++++++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-----GFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35678877754 5566665543 12358999999988766554444322 34688888886432 211
Q ss_pred -CCCCCccEEEEcCC
Q 017607 212 -VPRGKYDAIIVDSS 225 (369)
Q Consensus 212 -~~~~~fDvIi~D~~ 225 (369)
.-.++.|++|..+.
T Consensus 82 ~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 82 NHFHGKLNILVNNAG 96 (260)
T ss_dssp HHTTTCCCEEEECCC
T ss_pred HHcCCCCCEEEECCC
Confidence 11147999997654
No 467
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=82.70 E-value=5.3 Score=37.19 Aligned_cols=98 Identities=11% Similarity=0.260 Sum_probs=59.8
Q ss_pred CCCCEEEEEeCcc--cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCcc
Q 017607 141 PSPKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 141 ~~p~~VLdIG~G~--G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 218 (369)
...++|-+||+|. ++++..++ . .-+|+++|.+++.++.+++.+.... -.++++. .|..+ + ..-|
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~~----~~~i~~~-~~~~~-~-----~~aD 75 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEEL----LSKIEFT-TTLEK-V-----KDCD 75 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGGG----GGGEEEE-SSCTT-G-----GGCS
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHHH----hCCeEEe-CCHHH-H-----cCCC
Confidence 3568999999995 44556666 4 3589999999999998887631100 0134432 33322 2 2479
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEecccc
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 259 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~s 259 (369)
+||.-.++... ....+|..+... |+.+++.++.+
T Consensus 76 lVieavpe~~~-----vk~~l~~~l~~~--~~~IlasntSt 109 (293)
T 1zej_A 76 IVMEAVFEDLN-----TKVEVLREVERL--TNAPLCSNTSV 109 (293)
T ss_dssp EEEECCCSCHH-----HHHHHHHHHHTT--CCSCEEECCSS
T ss_pred EEEEcCcCCHH-----HHHHHHHHHhcC--CCCEEEEECCC
Confidence 99976544221 134566766555 88888766543
No 468
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=82.66 E-value=21 Score=32.06 Aligned_cols=77 Identities=18% Similarity=0.206 Sum_probs=47.1
Q ss_pred CCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC--
Q 017607 143 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 212 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~-- 212 (369)
.+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 22 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 22 SEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-----GVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp SCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4678877754 56666665531 2358999999987766554444332 24688888886421 2110
Q ss_pred CCCCccEEEEcCC
Q 017607 213 PRGKYDAIIVDSS 225 (369)
Q Consensus 213 ~~~~fDvIi~D~~ 225 (369)
.-+..|++|..+.
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1247999997654
No 469
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=82.63 E-value=6.4 Score=38.12 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=58.1
Q ss_pred EEEEEeCcccHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CC------CCCCEEEEEcchHHHHhhCCCC
Q 017607 145 TVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GF------EDPRVRLHIGDAVEFLRQVPRG 215 (369)
Q Consensus 145 ~VLdIG~G~G~~~--~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~------~~~rv~v~~~Da~~~l~~~~~~ 215 (369)
+|.+||+|.=+.. ..+++ ..+|+++|++++.++..++....... +. ...++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~----- 72 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK----- 72 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc-----
Confidence 6899999854333 33343 25899999999988866543210000 00 0012222 234333332
Q ss_pred CccEEEEcCCCCCC----CccccccHHHHHHHHHhccCCceEEeccccc
Q 017607 216 KYDAIIVDSSDPVG----PAQELVEKPFFDTIAKALRPGGVLCNMAESM 260 (369)
Q Consensus 216 ~fDvIi~D~~~p~~----~~~~L~~~ef~~~~~~~LkpgGilv~~~~s~ 260 (369)
..|+||+..+.+.. .+.--...+.++.+.. |+++.+++..+.++
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~ 120 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIP 120 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCC
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCC
Confidence 47999987665421 0110123567778888 88888777644443
No 470
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.62 E-value=16 Score=32.37 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=47.9
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcch--H------HHHhh
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA--V------EFLRQ 211 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da--~------~~l~~ 211 (369)
+.+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+.... ..++.++..|. . +.++.
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHHH
Confidence 35678877765 55666655431 23589999999988776665554331 23677777776 2 11211
Q ss_pred C--CCCCccEEEEcCC
Q 017607 212 V--PRGKYDAIIVDSS 225 (369)
Q Consensus 212 ~--~~~~fDvIi~D~~ 225 (369)
. .-++.|++|..+.
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 1247999997654
No 471
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=82.50 E-value=5 Score=32.15 Aligned_cols=79 Identities=13% Similarity=0.173 Sum_probs=50.3
Q ss_pred cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHh
Q 017607 167 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA 246 (369)
Q Consensus 167 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~ 246 (369)
.+|..||=|+...+..++.+... +-.+. ...|+.+.+.......+|+||+|...|... ..++++.+++.
T Consensus 15 ~~ILivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~-----g~~~~~~l~~~ 83 (153)
T 3hv2_A 15 PEILLVDSQEVILQRLQQLLSPL-----PYTLH-FARDATQALQLLASREVDLVISAAHLPQMD-----GPTLLARIHQQ 83 (153)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS-----SCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSC-----HHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHhccc-----CcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCc-----HHHHHHHHHhH
Confidence 47899999999998888887653 12233 455665555433335799999998765432 34677777763
Q ss_pred ccCCceEEecc
Q 017607 247 LRPGGVLCNMA 257 (369)
Q Consensus 247 LkpgGilv~~~ 257 (369)
.++-.+++.+
T Consensus 84 -~~~~~ii~~s 93 (153)
T 3hv2_A 84 -YPSTTRILLT 93 (153)
T ss_dssp -CTTSEEEEEC
T ss_pred -CCCCeEEEEE
Confidence 3444444433
No 472
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=82.03 E-value=5.5 Score=31.22 Aligned_cols=68 Identities=12% Similarity=0.092 Sum_probs=48.8
Q ss_pred cEEEEEECCHHHHHHHHhhchh-hcCCCCCCCEEEEEcchHHHHhhCCC-CCccEEEEcCCCC-CCCccccccHHHHHHH
Q 017607 167 ELIDICEIDKMVIDVSKKYFPE-LAVGFEDPRVRLHIGDAVEFLRQVPR-GKYDAIIVDSSDP-VGPAQELVEKPFFDTI 243 (369)
Q Consensus 167 ~~V~~VEid~~vi~~ar~~~~~-~~~~~~~~rv~v~~~Da~~~l~~~~~-~~fDvIi~D~~~p-~~~~~~L~~~ef~~~~ 243 (369)
.+|..||=|+...+..++.+.. . +-++. ...|+.+.++.... ..+|+||+|...| ... ..++++.+
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~-----~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~-----g~~~~~~l 73 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIG-----EYDFI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKE-----GLEVLSAI 73 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHC-----CCEEE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHH-----HHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcc-----CccEE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCc-----HHHHHHHH
Confidence 4799999999999988888875 3 22344 66778777766555 6899999998654 211 34577777
Q ss_pred HH
Q 017607 244 AK 245 (369)
Q Consensus 244 ~~ 245 (369)
++
T Consensus 74 ~~ 75 (140)
T 3lua_A 74 RN 75 (140)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 473
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=82.02 E-value=30 Score=31.55 Aligned_cols=133 Identities=17% Similarity=0.233 Sum_probs=69.3
Q ss_pred EEEE--cCeEeecccchhHHHHHHHhccccCCCCCCEEEEEeCcccHHHHHH-HhcCCCcEEEEEECCHHHHHHHHhhch
Q 017607 111 VLVL--DGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREI-SRHDSVELIDICEIDKMVIDVSKKYFP 187 (369)
Q Consensus 111 ~l~l--Dg~~q~~~~de~~Y~e~l~~~~l~~~~~p~~VLdIG~G~G~~~~~l-~k~~~~~~V~~VEid~~vi~~ar~~~~ 187 (369)
.++. ||.+.-...|-.-+...+..... .+..++||+||+|..+-+... +......+|+.+.-+++-.+...+.+.
T Consensus 93 Ti~~~~dG~l~G~NTD~~Gf~~~L~~~g~--~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~ 170 (269)
T 3tum_A 93 VIRRERDGRLLGDNVDGAGFLGAAHKHGF--EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLG 170 (269)
T ss_dssp EEEECTTSCEEEECCHHHHHHHHHHHTTC--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEcChHHHHHHHHHhCC--CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHh
Confidence 4554 56666666776666666654322 245689999998754443332 233456799999998776554444433
Q ss_pred hhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCcccc-ccHHHHHHHHHhccCCceEEecccccc
Q 017607 188 ELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQEL-VEKPFFDTIAKALRPGGVLCNMAESMW 261 (369)
Q Consensus 188 ~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L-~~~ef~~~~~~~LkpgGilv~~~~s~~ 261 (369)
.. .+.+.+. .+ . . ..+.||+||...+-...+...+ ... .....|+++.++.=...+|+
T Consensus 171 ~~-----~~~~~~~-~~-~----~-~~~~~dliiNaTp~Gm~~~~~~p~~~----~~~~~l~~~~~v~D~vY~P~ 229 (269)
T 3tum_A 171 NG-----FPGLTVS-TQ-F----S-GLEDFDLVANASPVGMGTRAELPLSA----ALLATLQPDTLVADVVTSPE 229 (269)
T ss_dssp HH-----CTTCEEE-SC-C----S-CSTTCSEEEECSSTTCSTTCCCSSCH----HHHHTCCTTSEEEECCCSSS
T ss_pred cc-----CCcceeh-hh-h----h-hhhcccccccCCccccCCCCCCCCCh----HHHhccCCCcEEEEEccCCC
Confidence 22 1122221 11 0 1 1246999986433222221111 122 23356788777663344443
No 474
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.86 E-value=7.5 Score=35.22 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=48.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..+.||+.|++ |++++++++. ....+|++++.+++-.+...+.+... ..++.++..|..+. ++..
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 45677777755 5566665543 12358999999887666555554432 35788888886431 2111
Q ss_pred CCCCccEEEEcCC
Q 017607 213 PRGKYDAIIVDSS 225 (369)
Q Consensus 213 ~~~~fDvIi~D~~ 225 (369)
..++.|++|..+.
T Consensus 106 ~~g~iD~lvnnAg 118 (275)
T 4imr_A 106 AIAPVDILVINAS 118 (275)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 0147999997654
No 475
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.85 E-value=21 Score=32.00 Aligned_cols=78 Identities=14% Similarity=0.216 Sum_probs=46.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEEC-------------CHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEI-------------DKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEi-------------d~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
..+.||+.|++ |++++++++. ....+|++++. +++-++...+.+... ..++.++..|..
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-----TCCEEEEECCTT
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-----CCeEEEEECCCC
Confidence 45678888765 4556555543 12368999998 566655544444332 457888888864
Q ss_pred HH------HhhC--CCCCccEEEEcCC
Q 017607 207 EF------LRQV--PRGKYDAIIVDSS 225 (369)
Q Consensus 207 ~~------l~~~--~~~~fDvIi~D~~ 225 (369)
+. ++.. .-++.|++|..+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 32 2111 0146999997654
No 476
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.83 E-value=23 Score=30.66 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=48.3
Q ss_pred CCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH--HhhCCC----
Q 017607 143 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--LRQVPR---- 214 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~--l~~~~~---- 214 (369)
.++||+.|++ |+++++++++. ...+|++++.+++-++...+.+.... ..++.++..|..+. ++..-+
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ----GVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 3567877755 55666665531 23579999999887776655543221 35788888887532 211111
Q ss_pred --CCccEEEEcCC
Q 017607 215 --GKYDAIIVDSS 225 (369)
Q Consensus 215 --~~fDvIi~D~~ 225 (369)
++.|++|..+.
T Consensus 77 ~~g~id~li~~Ag 89 (235)
T 3l77_A 77 RFGDVDVVVANAG 89 (235)
T ss_dssp HHSSCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 37899997653
No 477
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=81.82 E-value=7.9 Score=35.94 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=51.8
Q ss_pred EEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEE
Q 017607 145 TVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 222 (369)
Q Consensus 145 ~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 222 (369)
+|.+||+|.-+.+.. ++......+|+.+|++++.++.....+.... .+. ..+++...|. + .. ...|+||+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~-~~~~i~~~~~-~---a~--~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PVS-HGTRVWHGGH-S---EL--ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CTT-SCCEEEEECG-G---GG--TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hhc-CCeEEEECCH-H---Hh--CCCCEEEE
Confidence 789999875444333 3333333489999999986653222221110 111 2344444452 2 22 24799997
Q ss_pred cCCCCCCCc---cccc------cHHHHHHHHHhccCCceEEe
Q 017607 223 DSSDPVGPA---QELV------EKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 223 D~~~p~~~~---~~L~------~~ef~~~~~~~LkpgGilv~ 255 (369)
-...|..+. ..++ -+++++.+.+. .|++++++
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 654333221 0111 14555666665 69998876
No 478
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.76 E-value=16 Score=33.81 Aligned_cols=80 Identities=20% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..++||+.|++ |++++++++.. ...+|++++.++.-++.+.+.+.... .+.++.++..|..+. ++..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35678888866 44666655431 23589999999988776666554331 123788888886432 2111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-+..|++|..+.
T Consensus 83 ~~~g~id~lv~nAg 96 (319)
T 3ioy_A 83 ARFGPVSILCNNAG 96 (319)
T ss_dssp HHTCCEEEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 1246899997764
No 479
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.75 E-value=5.2 Score=39.65 Aligned_cols=68 Identities=16% Similarity=0.252 Sum_probs=48.9
Q ss_pred CCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHH--HHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~l~~~~~~~fD 218 (369)
..+|+++|+| .++..+++.. ....|+++|.|++.++.+.+.+ .+.++.||+.+ .|++..-+..|
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTCS
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcCC
Confidence 4579999987 4555666542 2357999999999998776554 36789999864 46655446799
Q ss_pred EEEE
Q 017607 219 AIIV 222 (369)
Q Consensus 219 vIi~ 222 (369)
++|.
T Consensus 71 ~~ia 74 (461)
T 4g65_A 71 MLVA 74 (461)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8885
No 480
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=81.71 E-value=15 Score=28.77 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=50.6
Q ss_pred EEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhc
Q 017607 168 LIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKAL 247 (369)
Q Consensus 168 ~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~L 247 (369)
+|..||=++...+..+..+..... +-.+.....++.+.+.......+|+|++|..-|... ..++++.+++.
T Consensus 4 ~ILivdd~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~al~~~~~~~~dlvllD~~lp~~~-----g~~l~~~l~~~- 74 (141)
T 3cu5_A 4 RILIVDDEKLTRDGLIANINWKAL---SFDQIDQADDGINAIQIALKHPPNVLLTDVRMPRMD-----GIELVDNILKL- 74 (141)
T ss_dssp EEEEECSCHHHHHHHHHHCCGGGS---CCSEEEEESSHHHHHHHHTTSCCSEEEEESCCSSSC-----HHHHHHHHHHH-
T ss_pred eEEEEeCCHHHHHHHHHHHHHccC---CcEEeeecccHHHHHHHHhcCCCCEEEEeCCCCCCC-----HHHHHHHHHhh-
Confidence 688999999998888877753211 123443677777766544445799999998765432 24567777664
Q ss_pred cCCceEEe
Q 017607 248 RPGGVLCN 255 (369)
Q Consensus 248 kpgGilv~ 255 (369)
.|+-.+++
T Consensus 75 ~~~~~ii~ 82 (141)
T 3cu5_A 75 YPDCSVIF 82 (141)
T ss_dssp CTTCEEEE
T ss_pred CCCCcEEE
Confidence 45544443
No 481
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=81.70 E-value=6.5 Score=30.69 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=49.9
Q ss_pred cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHh
Q 017607 167 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA 246 (369)
Q Consensus 167 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~ 246 (369)
.+|..||-|+...+..++.+... +-++ ....|+.+.++......+|+||+|...|... ..++++.+++.
T Consensus 7 ~~iLivdd~~~~~~~l~~~l~~~-----g~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~~ 75 (140)
T 3grc_A 7 PRILICEDDPDIARLLNLMLEKG-----GFDS-DMVHSAAQALEQVARRPYAAMTVDLNLPDQD-----GVSLIRALRRD 75 (140)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHT-----TCEE-EEECSHHHHHHHHHHSCCSEEEECSCCSSSC-----HHHHHHHHHTS
T ss_pred CCEEEEcCCHHHHHHHHHHHHHC-----CCeE-EEECCHHHHHHHHHhCCCCEEEEeCCCCCCC-----HHHHHHHHHhC
Confidence 57999999999999888887654 1233 3456666555433335799999998765433 34567777662
Q ss_pred -ccCCceEEe
Q 017607 247 -LRPGGVLCN 255 (369)
Q Consensus 247 -LkpgGilv~ 255 (369)
..++-.+++
T Consensus 76 ~~~~~~~ii~ 85 (140)
T 3grc_A 76 SRTRDLAIVV 85 (140)
T ss_dssp GGGTTCEEEE
T ss_pred cccCCCCEEE
Confidence 234444443
No 482
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=81.69 E-value=13 Score=33.35 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=57.7
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEE-ECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDIC-EIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~V-Eid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~ 212 (369)
..+.||+.|++. ++++++++.. ...+|+++ .-++...+...+.+... ..++.++..|..+. ++..
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASR-GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-----GGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSS-HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 356788887654 4555554421 12567776 44555555544444332 35788888886432 2111
Q ss_pred --CCCCccEEEEcCCCC-CCCccccc--------------cHHHHHHHHHhccCCceEEecc
Q 017607 213 --PRGKYDAIIVDSSDP-VGPAQELV--------------EKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 213 --~~~~fDvIi~D~~~p-~~~~~~L~--------------~~ef~~~~~~~LkpgGilv~~~ 257 (369)
.-++.|++|..+.-. ..+....- .....+.+...|+++|.+++.+
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 014799999765322 11111110 0123445666777788877544
No 483
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=81.68 E-value=1 Score=42.58 Aligned_cols=95 Identities=11% Similarity=0.012 Sum_probs=55.8
Q ss_pred CEEEEEe--CcccHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCC-CCCccEE
Q 017607 144 KTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDAI 220 (369)
Q Consensus 144 ~~VLdIG--~G~G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDvI 220 (369)
+.||+.| +|-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+.. ...+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 4566543 234555566677654 489999999998888876411 1001111133444343321 1369988
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEecc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 257 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~ 257 (369)
+-... . +.++.+.+.|+++|.++...
T Consensus 238 id~~g----~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT----G-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC----H-------HHHHHHHHHSCTTCEEEECC
T ss_pred EECCC----C-------hhHHHHHhhhcCCCEEEEEe
Confidence 74221 1 23477889999999998754
No 484
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.59 E-value=15 Score=32.80 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=49.5
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC-
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 212 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~- 212 (369)
..++||+.|++ |++++++++.. ...+|++++.+++-++.+.+.+... ...++.++..|..+. ++..
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677777755 55666665431 2358999999998877666655433 125788898886432 1111
Q ss_pred -CCCCccEEEEcCC
Q 017607 213 -PRGKYDAIIVDSS 225 (369)
Q Consensus 213 -~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0147999997653
No 485
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.55 E-value=8.3 Score=37.98 Aligned_cols=106 Identities=12% Similarity=0.185 Sum_probs=60.5
Q ss_pred CCEEEEEeCcccHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhhchhhcC-CC------CCCCEEEEEcchHHHHhhCC
Q 017607 143 PKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GF------EDPRVRLHIGDAVEFLRQVP 213 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~--l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~------~~~rv~v~~~Da~~~l~~~~ 213 (369)
-.+|-+||+|.-+.... +++ ..+|+++|++++.++..++....... ++ ...++++ ..|..+.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~---- 107 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAY---- 107 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH----
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHH----
Confidence 34899999986554433 333 35899999999999877663210000 00 0113332 34544443
Q ss_pred CCCccEEEEcCCCCCCCc---ccc-ccHHHHHHHHHhccCCceEEeccc
Q 017607 214 RGKYDAIIVDSSDPVGPA---QEL-VEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 214 ~~~fDvIi~D~~~p~~~~---~~L-~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
...|+||+..+.+.... ..+ +-.+..+.+.. |+||-+++..+.
T Consensus 108 -~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~ST 154 (432)
T 3pid_A 108 -RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKST 154 (432)
T ss_dssp -TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSC
T ss_pred -hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCC
Confidence 24799998665543110 111 22455677788 999888876543
No 486
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.48 E-value=4.3 Score=38.78 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=23.2
Q ss_pred CCEEEEEeCcc-cHHHHHHHhcCCCcEEEEEECCH
Q 017607 143 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDK 176 (369)
Q Consensus 143 p~~VLdIG~G~-G~~~~~l~k~~~~~~V~~VEid~ 176 (369)
..+||+||+|+ |+.+...+-..++.+++.||-|.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 56999999883 33333323334688999999875
No 487
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.44 E-value=22 Score=31.89 Aligned_cols=78 Identities=13% Similarity=0.215 Sum_probs=47.3
Q ss_pred CCCEEEEEeCcccHHHHHHHhc--CCCcEEEEEEC-------------CHHHHHHHHhhchhhcCCCCCCCEEEEEcchH
Q 017607 142 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEI-------------DKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 206 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEi-------------d~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~ 206 (369)
..+.||+.|++ |++++++++. ....+|++++. +++-++...+.+... ..++.++..|..
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-----GRKALTRVLDVR 87 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-----TCCEEEEECCTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-----CCeEEEEEcCCC
Confidence 45678877765 4566665543 12368999998 666666555544432 357888888864
Q ss_pred HH------HhhC--CCCCccEEEEcCC
Q 017607 207 EF------LRQV--PRGKYDAIIVDSS 225 (369)
Q Consensus 207 ~~------l~~~--~~~~fDvIi~D~~ 225 (369)
+. ++.. .-++.|++|..+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 32 2111 0147999997654
No 488
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=81.40 E-value=9 Score=30.42 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=51.7
Q ss_pred cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHh
Q 017607 167 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA 246 (369)
Q Consensus 167 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~ 246 (369)
.+|..||=|+...+..++.+...+ +...-....++.+.++......+|+||+|...+... ..++++.+++.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~----~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~-----g~~~~~~l~~~ 91 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQP----DVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT-----GLEVLEWIRSE 91 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTST----TEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSC-----HHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCC----CcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCc-----HHHHHHHHHHh
Confidence 479999999999998888776431 112233456766666554456799999998655432 34677777765
Q ss_pred ccCCceEEec
Q 017607 247 LRPGGVLCNM 256 (369)
Q Consensus 247 LkpgGilv~~ 256 (369)
.++-.+++.
T Consensus 92 -~~~~~ii~l 100 (150)
T 4e7p_A 92 -KLETKVVVV 100 (150)
T ss_dssp -TCSCEEEEE
T ss_pred -CCCCeEEEE
Confidence 455544443
No 489
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=81.37 E-value=6.5 Score=30.70 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=52.1
Q ss_pred cEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHh
Q 017607 167 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA 246 (369)
Q Consensus 167 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~ 246 (369)
.+|..||=++...+..++.+... +-++. ...|+.+.+.......+|+||+|...|.+. .-..++++.+++.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~---~~g~~~~~~l~~~ 77 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPL-----DVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKK---DSGIELLETLVKR 77 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS-----SSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBT---THHHHHHHHHHHT
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC-----CcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCC---ccHHHHHHHHHhC
Confidence 47999999999999888887643 12333 567777777655556899999998654410 1134567777665
Q ss_pred ccCCceEEe
Q 017607 247 LRPGGVLCN 255 (369)
Q Consensus 247 LkpgGilv~ 255 (369)
- ++-.+++
T Consensus 78 ~-~~~~ii~ 85 (136)
T 3kto_A 78 G-FHLPTIV 85 (136)
T ss_dssp T-CCCCEEE
T ss_pred C-CCCCEEE
Confidence 3 4444443
No 490
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.37 E-value=4.1 Score=40.73 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=62.4
Q ss_pred CCEEEEEeCcc--cHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhh-cCCCCC------------CCEEEEEcchHH
Q 017607 143 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-AVGFED------------PRVRLHIGDAVE 207 (369)
Q Consensus 143 p~~VLdIG~G~--G~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~~------------~rv~v~~~Da~~ 207 (369)
.++|-+||+|. ++++..+++.. .+|+++|++++.++.+++.+... ...... .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 35799999985 34455566553 47999999999999877643211 000001 134432 332 2
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 208 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 208 ~l~~~~~~~fDvIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
-+ ...|+||.-.+.. .-...++++.+...++|+.+++.++.
T Consensus 81 ~~-----~~aDlVIeAVpe~-----~~vk~~v~~~l~~~~~~~~IlasntS 121 (483)
T 3mog_A 81 AL-----AAADLVIEAASER-----LEVKKALFAQLAEVCPPQTLLTTNTS 121 (483)
T ss_dssp GG-----GGCSEEEECCCCC-----HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred Hh-----cCCCEEEEcCCCc-----HHHHHHHHHHHHHhhccCcEEEecCC
Confidence 12 2479999755321 11235688899999999998876554
No 491
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=81.33 E-value=10 Score=36.17 Aligned_cols=93 Identities=10% Similarity=0.181 Sum_probs=60.3
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+|.+||+|.=+ +++.+++.. .+|+++|.+++.++.+.+. .+. ...|..+.++.. ...|+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a--~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL--VKPRVV 85 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS--CSSCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC--CCCCEE
Confidence 4589999988533 334445543 5899999999887765542 111 124556666543 357999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHhccCCceEEeccc
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 258 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~~~~ 258 (369)
|+-.+.+ ...+.++.+...|++|-+++..+.
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~iiId~st 116 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAANDIVIDGGN 116 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCCEEEeCCC
Confidence 9765443 235677888888998877775443
No 492
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=81.32 E-value=13 Score=29.84 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=49.1
Q ss_pred CCEEEEEeCcccHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEE-EEcchHHHHhhCCCCCcc
Q 017607 143 PKTVLVVGGGDGGVLREISRH---DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRL-HIGDAVEFLRQVPRGKYD 218 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~---~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v-~~~Da~~~l~~~~~~~fD 218 (369)
.++|++||+| .+++.+++. .+. +|++++.+++-.+...+.+. +.+ ...|..+.+. ..|
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~-----~~D 82 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK-----NND 82 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH-----TCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc-----CCC
Confidence 6799999974 566666553 333 49999999887654333221 122 2344444442 489
Q ss_pred EEEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 219 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 219 vIi~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
+||.-.+.+. + +.. ...|++|++++-
T Consensus 83 ivi~at~~~~-~---~~~-------~~~l~~g~~vid 108 (144)
T 3oj0_A 83 VIITATSSKT-P---IVE-------ERSLMPGKLFID 108 (144)
T ss_dssp EEEECSCCSS-C---SBC-------GGGCCTTCEEEE
T ss_pred EEEEeCCCCC-c---Eee-------HHHcCCCCEEEE
Confidence 9987554431 1 111 146778777664
No 493
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=81.30 E-value=22 Score=31.81 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=47.8
Q ss_pred CCCEEEEEeCcccHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------Hhh--
Q 017607 142 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ-- 211 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~~~l~k~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~-- 211 (369)
..++||+.|+ +|++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 3567887775 456666665531 2358999999987766554444332 34688888886422 211
Q ss_pred -CCCCCccEEEEcCC
Q 017607 212 -VPRGKYDAIIVDSS 225 (369)
Q Consensus 212 -~~~~~fDvIi~D~~ 225 (369)
.-+++.|++|..+.
T Consensus 94 ~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 94 HVFDGKLNILVNNAG 108 (273)
T ss_dssp HHTTSCCCEEEECCC
T ss_pred HHcCCCCcEEEECCC
Confidence 11157899997654
No 494
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=81.25 E-value=4.4 Score=31.59 Aligned_cols=78 Identities=14% Similarity=-0.023 Sum_probs=50.1
Q ss_pred CcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEEEEcCCCC-CCCccccccHHHHHHHH
Q 017607 166 VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDP-VGPAQELVEKPFFDTIA 244 (369)
Q Consensus 166 ~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~p-~~~~~~L~~~ef~~~~~ 244 (369)
..+|..||-|+...+..++.+... +-.+.....++.+.+.......+|+||+|...+ ... ..++++.++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~-----g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~-----g~~~~~~l~ 78 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESL-----GYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALD-----GVETAARLA 78 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSC-----HHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHC-----CCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCC-----HHHHHHHHH
Confidence 357999999999998888887654 123333456665554433234699999998654 222 246777877
Q ss_pred HhccCCceEEe
Q 017607 245 KALRPGGVLCN 255 (369)
Q Consensus 245 ~~LkpgGilv~ 255 (369)
+. ++-.+++
T Consensus 79 ~~--~~~~ii~ 87 (140)
T 3cg0_A 79 AG--CNLPIIF 87 (140)
T ss_dssp HH--SCCCEEE
T ss_pred hC--CCCCEEE
Confidence 76 5554443
No 495
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=81.22 E-value=18 Score=32.25 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=49.2
Q ss_pred CCCEEEEEeCcc--c---HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------Hh
Q 017607 142 SPKTVLVVGGGD--G---GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LR 210 (369)
Q Consensus 142 ~p~~VLdIG~G~--G---~~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~ 210 (369)
+.|.+|+-|+++ | .+++.+++.. .+|+.++.+++..+.+.+.+... ..+++.++..|..+. ++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG--AKLVFTYRKERSRKELEKLLEQL----NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHGGG----TCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc----CCCcEEEEEccCCCHHHHHHHHH
Confidence 467899998643 2 2344445553 68999999988777666655543 235788888886421 21
Q ss_pred hC--CCCCccEEEEcCC
Q 017607 211 QV--PRGKYDAIIVDSS 225 (369)
Q Consensus 211 ~~--~~~~fDvIi~D~~ 225 (369)
.. .-++.|+++.+..
T Consensus 79 ~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHCCCSEEEECCC
T ss_pred HHHHHhCCCCEEEeccc
Confidence 11 1257999997643
No 496
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=80.94 E-value=12 Score=34.70 Aligned_cols=70 Identities=16% Similarity=0.256 Sum_probs=41.0
Q ss_pred CCCEEEEEeCcccHH--HHHHH-hcCCCcEE-EEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCc
Q 017607 142 SPKTVLVVGGGDGGV--LREIS-RHDSVELI-DICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 217 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~--~~~l~-k~~~~~~V-~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~f 217 (369)
++.+|.+||+|.-+. +..+. +.. ..++ .++|.+++..+...+.+. .+ ....|..+.+.. ...
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~-~~~~vav~d~~~~~~~~~a~~~g-------~~---~~~~~~~~~l~~---~~~ 72 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQ-GVKLVAACALDSNQLEWAKNELG-------VE---TTYTNYKDMIDT---ENI 72 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCS-SEEEEEEECSCHHHHHHHHHTTC-------CS---EEESCHHHHHTT---SCC
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHhC-------CC---cccCCHHHHhcC---CCC
Confidence 456899999985332 23344 333 3454 567999987765444322 11 234676666532 358
Q ss_pred cEEEEcCC
Q 017607 218 DAIIVDSS 225 (369)
Q Consensus 218 DvIi~D~~ 225 (369)
|+|++-.+
T Consensus 73 D~V~i~tp 80 (346)
T 3cea_A 73 DAIFIVAP 80 (346)
T ss_dssp SEEEECSC
T ss_pred CEEEEeCC
Confidence 99987544
No 497
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=80.86 E-value=17 Score=32.66 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=47.6
Q ss_pred CCEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC--
Q 017607 143 PKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 212 (369)
Q Consensus 143 p~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~-- 212 (369)
.+.||+.|++ |++++++++. ....+|++++.+++-.+...+.+.... ..++.++..|..+. ++..
T Consensus 27 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT----GRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH----SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678877765 5566666553 223589999999876655544443211 35788888886432 2111
Q ss_pred CCCCccEEEEcCC
Q 017607 213 PRGKYDAIIVDSS 225 (369)
Q Consensus 213 ~~~~fDvIi~D~~ 225 (369)
.-++.|++|..+.
T Consensus 102 ~~g~id~lv~nAg 114 (277)
T 4fc7_A 102 EFGRIDILINCAA 114 (277)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 0147999997654
No 498
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=80.80 E-value=19 Score=32.37 Aligned_cols=72 Identities=19% Similarity=0.329 Sum_probs=45.1
Q ss_pred CEEEEEeCcccHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHH------HhhC--C
Q 017607 144 KTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV--P 213 (369)
Q Consensus 144 ~~VLdIG~G~G~~~~~l~k~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~------l~~~--~ 213 (369)
|+||+-|++. ++.+++++. ....+|..+|++++..+...+. .+++..+..|..+. ++.. .
T Consensus 3 K~vlVTGas~-GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGH-GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5677777665 466665543 1246899999998877654442 24677788886432 2111 1
Q ss_pred CCCccEEEEcCC
Q 017607 214 RGKYDAIIVDSS 225 (369)
Q Consensus 214 ~~~fDvIi~D~~ 225 (369)
-++.|++|.++.
T Consensus 73 ~g~iDiLVNNAG 84 (247)
T 3ged_A 73 LQRIDVLVNNAC 84 (247)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257999997653
No 499
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.79 E-value=4.3 Score=37.00 Aligned_cols=91 Identities=20% Similarity=0.177 Sum_probs=54.0
Q ss_pred CCEEEEEeCcccH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccEE
Q 017607 143 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 220 (369)
Q Consensus 143 p~~VLdIG~G~G~--~~~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 220 (369)
..+|.+||+|.-+ ++..+++.....+|+++|.+++.++.+++. . ..+ ....|..+.+ ...|+|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g-----~~~----~~~~~~~~~~-----~~aDvV 70 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-G-----IVD----EATADFKVFA-----ALADVI 70 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-T-----SCS----EEESCTTTTG-----GGCSEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-C-----Ccc----cccCCHHHhh-----cCCCEE
Confidence 3589999988533 334455543235899999999888766542 1 000 1223322222 257999
Q ss_pred EEcCCCCCCCccccccHHHHHHHHHh-ccCCceEEe
Q 017607 221 IVDSSDPVGPAQELVEKPFFDTIAKA-LRPGGVLCN 255 (369)
Q Consensus 221 i~D~~~p~~~~~~L~~~ef~~~~~~~-LkpgGilv~ 255 (369)
|+-.+. .. ..+.++.+... |+++.+++.
T Consensus 71 ilavp~-----~~--~~~v~~~l~~~~l~~~~ivi~ 99 (290)
T 3b1f_A 71 ILAVPI-----KK--TIDFIKILADLDLKEDVIITD 99 (290)
T ss_dssp EECSCH-----HH--HHHHHHHHHTSCCCTTCEEEC
T ss_pred EEcCCH-----HH--HHHHHHHHHhcCCCCCCEEEE
Confidence 975532 11 25677777777 888766663
No 500
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=80.70 E-value=13 Score=36.99 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=59.7
Q ss_pred CCCEEEEEeCcccHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhhchhhcCCCCCCCEEEEEcchHHHHhhCCCCCccE
Q 017607 142 SPKTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 219 (369)
Q Consensus 142 ~p~~VLdIG~G~G~~~--~~l~k~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDv 219 (369)
..++|.+||+|.-+.+ +.+++.. .+|++.+.+++.++...+..+ +..+. ...|..+.++.. ++.|+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~~r~~~~~~~l~~~~~-------~~gi~-~~~s~~e~v~~l--~~aDv 81 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRG--YTVSIFNRSREKTEEVIAENP-------GKKLV-PYYTVKEFVESL--ETPRR 81 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHST-------TSCEE-ECSSHHHHHHTB--CSSCE
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHhhCC-------CCCeE-EeCCHHHHHhCC--CCCCE
Confidence 4568999999854443 3444443 479999999998876655332 11233 234555665432 25899
Q ss_pred EEEcCCCCCCCccccccHHHHHHHHHhccCCceEEe
Q 017607 220 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 255 (369)
Q Consensus 220 Ii~D~~~p~~~~~~L~~~ef~~~~~~~LkpgGilv~ 255 (369)
||+-.+.+. ...+.++.+...|+||-+++.
T Consensus 82 Vil~Vp~~~------~v~~vl~~l~~~l~~g~iIId 111 (480)
T 2zyd_A 82 ILLMVKAGA------GTDAAIDSLKPYLDKGDIIID 111 (480)
T ss_dssp EEECSCSSS------HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEECCCHH------HHHHHHHHHHhhcCCCCEEEE
Confidence 997554321 134577788888888777664
Done!