Query 017614
Match_columns 368
No_of_seqs 328 out of 2113
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 10:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017614.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017614hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 9.6E-90 2.1E-94 634.2 18.0 301 5-325 2-303 (303)
2 KOG0374 Serine/threonine speci 100.0 1E-81 2.2E-86 616.7 27.3 294 2-295 5-303 (331)
3 KOG0373 Serine/threonine speci 100.0 2E-82 4.3E-87 578.0 18.0 291 1-299 1-293 (306)
4 PTZ00480 serine/threonine-prot 100.0 1.1E-78 2.3E-83 593.4 31.7 296 3-298 8-304 (320)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3E-77 6.5E-82 578.8 29.6 290 6-295 2-292 (293)
6 PTZ00244 serine/threonine-prot 100.0 6.3E-77 1.4E-81 576.4 29.0 291 4-294 2-293 (294)
7 cd07420 MPP_RdgC Drosophila me 100.0 3.9E-76 8.5E-81 575.9 31.2 283 2-292 3-320 (321)
8 PTZ00239 serine/threonine prot 100.0 6E-76 1.3E-80 571.5 30.4 286 5-298 2-289 (303)
9 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4.4E-76 9.4E-81 568.7 28.7 283 6-296 2-285 (285)
10 smart00156 PP2Ac Protein phosp 100.0 8.8E-74 1.9E-78 549.5 29.8 270 26-295 1-270 (271)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 1.5E-73 3.2E-78 555.9 30.2 285 5-297 2-299 (305)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.3E-73 2.9E-78 558.2 27.9 287 3-297 13-306 (316)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3.9E-72 8.4E-77 547.6 28.2 286 9-294 1-311 (311)
14 KOG0371 Serine/threonine prote 100.0 4.9E-73 1.1E-77 526.3 12.7 300 5-325 19-319 (319)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 9.2E-69 2E-73 532.0 31.2 292 3-295 9-366 (377)
16 KOG0375 Serine-threonine phosp 100.0 6.5E-69 1.4E-73 516.9 11.8 272 25-297 60-344 (517)
17 KOG0377 Protein serine/threoni 100.0 1.1E-56 2.4E-61 440.7 15.6 284 4-295 119-432 (631)
18 KOG0376 Serine-threonine phosp 100.0 8.2E-52 1.8E-56 413.5 12.6 273 25-298 182-461 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2.6E-36 5.7E-41 279.0 20.1 214 56-280 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 2.7E-25 6E-30 210.6 15.8 122 53-176 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 4.3E-25 9.3E-30 204.6 16.7 175 56-265 1-196 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 7.2E-23 1.6E-27 192.4 17.8 121 53-176 1-143 (234)
23 PRK00166 apaH diadenosine tetr 99.9 9.9E-23 2.2E-27 196.3 18.3 217 53-284 1-261 (275)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 8.8E-23 1.9E-27 190.9 17.0 115 56-173 2-143 (222)
25 cd07422 MPP_ApaH Escherichia c 99.9 3.8E-23 8.2E-28 197.4 12.2 119 55-177 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 1.4E-22 3.1E-27 194.7 12.1 121 53-177 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 1.9E-21 4.2E-26 181.1 12.5 115 53-173 17-146 (218)
28 PHA02239 putative protein phos 99.8 1.1E-20 2.3E-25 178.4 14.7 172 53-266 1-219 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.8 3.8E-21 8.2E-26 177.4 11.3 169 53-252 1-184 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.8 2.2E-20 4.7E-25 180.4 16.0 148 54-206 3-243 (304)
31 PRK09968 serine/threonine-spec 99.8 2.9E-19 6.3E-24 166.7 11.6 115 53-173 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 3.6E-12 7.8E-17 106.9 11.9 159 53-247 1-199 (200)
33 COG0639 ApaH Diadenosine tetra 99.2 9.7E-12 2.1E-16 105.0 4.5 144 126-270 3-155 (155)
34 PF12850 Metallophos_2: Calcin 99.1 1.3E-09 2.8E-14 94.2 13.4 137 53-265 1-137 (156)
35 cd00841 MPP_YfcE Escherichia c 99.1 4.7E-09 1E-13 91.7 16.3 83 54-173 1-86 (155)
36 PRK09453 phosphodiesterase; Pr 99.0 1.6E-09 3.4E-14 97.9 9.1 68 53-124 1-76 (182)
37 TIGR00040 yfcE phosphoesterase 98.9 2.1E-08 4.6E-13 88.3 14.3 63 53-124 1-64 (158)
38 cd07379 MPP_239FB Homo sapiens 98.8 3.8E-08 8.2E-13 84.5 11.4 118 54-252 1-120 (135)
39 cd07397 MPP_DevT Myxococcus xa 98.8 7.1E-08 1.5E-12 91.5 12.3 155 54-247 2-207 (238)
40 cd00838 MPP_superfamily metall 98.8 8.7E-08 1.9E-12 78.6 10.7 117 56-252 1-119 (131)
41 cd07388 MPP_Tt1561 Thermus the 98.7 7E-07 1.5E-11 84.1 17.8 71 53-124 5-75 (224)
42 cd07394 MPP_Vps29 Homo sapiens 98.5 1.6E-05 3.4E-10 72.1 17.8 152 54-293 1-165 (178)
43 cd07404 MPP_MS158 Microscilla 98.4 2.8E-06 6.1E-11 75.1 10.0 67 55-124 1-68 (166)
44 PRK05340 UDP-2,3-diacylglucosa 98.3 5.6E-06 1.2E-10 78.1 12.1 207 53-290 1-236 (241)
45 cd07403 MPP_TTHA0053 Thermus t 98.3 1.2E-05 2.5E-10 69.1 11.3 107 56-252 1-107 (129)
46 cd07399 MPP_YvnB Bacillus subt 98.1 0.00017 3.6E-09 67.1 17.0 194 54-294 2-213 (214)
47 cd07400 MPP_YydB Bacillus subt 98.1 5.1E-05 1.1E-09 65.2 12.7 118 55-253 1-130 (144)
48 cd07392 MPP_PAE1087 Pyrobaculu 98.1 5.6E-06 1.2E-10 73.6 6.8 65 55-125 1-66 (188)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.1 2.1E-05 4.6E-10 73.8 9.7 203 55-284 1-229 (231)
50 cd07385 MPP_YkuE_C Bacillus su 98.0 1.4E-05 3E-10 73.5 6.1 71 53-125 2-77 (223)
51 COG0622 Predicted phosphoester 97.9 0.00067 1.4E-08 61.5 15.9 160 53-294 2-165 (172)
52 PRK11340 phosphodiesterase Yae 97.9 2.6E-05 5.7E-10 75.1 7.1 70 53-124 50-125 (271)
53 KOG0376 Serine-threonine phosp 97.8 1.9E-06 4.1E-11 87.9 -3.3 240 24-270 13-299 (476)
54 TIGR03729 acc_ester putative p 97.7 8.2E-05 1.8E-09 70.0 6.8 68 54-124 1-74 (239)
55 cd07395 MPP_CSTP1 Homo sapiens 97.7 0.0014 3E-08 62.2 14.6 71 54-124 6-99 (262)
56 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00016 3.4E-09 64.8 7.6 56 69-124 31-88 (172)
57 cd07383 MPP_Dcr2 Saccharomyces 97.6 0.0032 6.9E-08 57.4 15.9 70 53-122 3-87 (199)
58 cd07396 MPP_Nbla03831 Homo sap 97.5 0.00027 5.8E-09 67.7 7.6 73 54-126 2-88 (267)
59 PHA02546 47 endonuclease subun 97.5 0.00022 4.7E-09 71.0 6.6 72 53-124 1-89 (340)
60 cd07390 MPP_AQ1575 Aquifex aeo 97.4 0.00045 9.7E-09 61.7 7.3 43 79-126 42-84 (168)
61 cd07402 MPP_GpdQ Enterobacter 97.4 0.00066 1.4E-08 63.1 7.9 69 54-124 1-83 (240)
62 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.3 0.00046 1E-08 66.6 7.0 70 55-124 1-86 (262)
63 TIGR00619 sbcd exonuclease Sbc 97.3 0.00055 1.2E-08 65.4 6.8 72 53-124 1-88 (253)
64 PRK04036 DNA polymerase II sma 97.3 0.00081 1.7E-08 70.6 8.3 113 53-172 244-388 (504)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.2 0.0008 1.7E-08 61.4 6.7 74 54-127 1-92 (223)
66 cd08165 MPP_MPPE1 human MPPE1 97.2 0.0048 1E-07 54.7 10.9 47 79-125 38-90 (156)
67 PRK11148 cyclic 3',5'-adenosin 97.2 0.0011 2.3E-08 63.8 7.2 71 52-124 14-98 (275)
68 PRK10966 exonuclease subunit S 97.1 0.00098 2.1E-08 68.1 7.0 72 53-125 1-88 (407)
69 TIGR00024 SbcD_rel_arch putati 96.9 0.0025 5.5E-08 60.1 7.4 69 53-125 15-103 (225)
70 TIGR00583 mre11 DNA repair pro 96.9 0.0029 6.4E-08 64.7 7.8 73 53-125 4-124 (405)
71 COG1409 Icc Predicted phosphoh 96.8 0.0045 9.7E-08 58.4 8.4 73 53-127 1-81 (301)
72 COG2129 Predicted phosphoester 96.8 0.18 3.8E-06 47.7 18.5 205 52-284 3-217 (226)
73 cd07398 MPP_YbbF-LpxH Escheric 96.8 0.002 4.4E-08 58.9 5.6 29 224-252 177-205 (217)
74 cd07393 MPP_DR1119 Deinococcus 96.8 0.0033 7.2E-08 59.1 6.7 45 224-270 181-228 (232)
75 cd07401 MPP_TMEM62_N Homo sapi 96.6 0.0059 1.3E-07 58.3 6.9 28 228-255 190-217 (256)
76 COG0420 SbcD DNA repair exonuc 96.5 0.0064 1.4E-07 61.3 7.0 74 53-126 1-90 (390)
77 cd00839 MPP_PAPs purple acid p 96.3 0.0095 2.1E-07 57.2 6.9 70 53-126 5-83 (294)
78 COG2908 Uncharacterized protei 96.2 0.023 5.1E-07 53.9 8.8 197 57-286 2-229 (237)
79 cd07386 MPP_DNA_pol_II_small_a 96.1 0.017 3.8E-07 54.4 7.2 68 56-125 2-95 (243)
80 COG1408 Predicted phosphohydro 96.1 0.014 3.1E-07 57.0 6.6 72 53-126 45-120 (284)
81 cd07380 MPP_CWF19_N Schizosacc 96.0 0.015 3.3E-07 51.5 5.9 119 56-247 1-121 (150)
82 cd07384 MPP_Cdc1_like Saccharo 95.9 0.018 3.8E-07 51.9 6.1 47 79-125 45-101 (171)
83 cd08163 MPP_Cdc1 Saccharomyces 95.9 0.15 3.2E-06 49.0 12.6 24 223-246 203-226 (257)
84 cd08166 MPP_Cdc1_like_1 unchar 95.6 0.053 1.1E-06 50.2 8.1 46 79-124 42-93 (195)
85 COG1407 Predicted ICC-like pho 95.2 0.11 2.3E-06 49.5 8.9 100 52-174 19-140 (235)
86 cd00845 MPP_UshA_N_like Escher 95.0 0.041 8.9E-07 51.7 5.6 66 54-124 2-82 (252)
87 PF14582 Metallophos_3: Metall 94.9 0.14 3E-06 48.6 8.5 208 53-284 6-248 (255)
88 PLN02533 probable purple acid 94.0 0.075 1.6E-06 54.8 5.1 71 52-125 139-212 (427)
89 cd08164 MPP_Ted1 Saccharomyces 93.6 0.15 3.2E-06 47.2 5.8 65 60-124 24-111 (193)
90 COG1311 HYS2 Archaeal DNA poly 93.2 1.2 2.6E-05 46.4 12.2 207 54-284 227-461 (481)
91 cd07410 MPP_CpdB_N Escherichia 92.8 0.15 3.2E-06 49.0 4.8 20 228-247 209-229 (277)
92 cd07378 MPP_ACP5 Homo sapiens 92.3 0.32 6.9E-06 46.2 6.2 70 54-124 2-83 (277)
93 KOG0918 Selenium-binding prote 92.2 0.0055 1.2E-07 61.8 -6.2 193 80-284 48-250 (476)
94 COG4186 Predicted phosphoester 92.2 0.3 6.4E-06 43.9 5.3 46 78-127 44-89 (186)
95 cd07408 MPP_SA0022_N Staphyloc 91.0 0.31 6.8E-06 46.3 4.7 65 54-123 2-81 (257)
96 cd07387 MPP_PolD2_C PolD2 (DNA 90.8 7.2 0.00016 37.7 13.8 48 237-289 204-254 (257)
97 KOG3325 Membrane coat complex 90.5 4.1 8.9E-05 36.5 10.7 116 55-253 3-124 (183)
98 cd07412 MPP_YhcR_N Bacillus su 89.3 0.48 1.1E-05 46.0 4.5 66 54-124 2-88 (288)
99 KOG2863 RNA lariat debranching 88.6 0.96 2.1E-05 45.6 5.9 73 53-125 1-89 (456)
100 cd07411 MPP_SoxB_N Thermus the 87.2 1.1 2.4E-05 42.8 5.4 64 55-124 3-95 (264)
101 PF08321 PPP5: PPP5 TPR repeat 86.9 1.7 3.6E-05 35.8 5.5 42 3-51 54-95 (95)
102 KOG3662 Cell division control 86.1 1.4 3.1E-05 45.2 5.7 55 69-123 82-143 (410)
103 cd00842 MPP_ASMase acid sphing 84.8 1.9 4E-05 41.6 5.7 74 54-127 39-125 (296)
104 PRK09419 bifunctional 2',3'-cy 82.4 1.7 3.6E-05 50.4 4.9 65 54-123 662-735 (1163)
105 cd07409 MPP_CD73_N CD73 ecto-5 79.2 3 6.5E-05 40.3 4.8 66 54-124 2-94 (281)
106 PF04042 DNA_pol_E_B: DNA poly 79.0 3.8 8.2E-05 37.4 5.2 72 55-126 1-93 (209)
107 TIGR00282 metallophosphoestera 78.3 4.1 9E-05 39.5 5.4 67 53-124 1-71 (266)
108 COG1768 Predicted phosphohydro 77.1 5.2 0.00011 37.0 5.3 82 79-176 43-126 (230)
109 PF06874 FBPase_2: Firmicute f 76.8 1.9 4.2E-05 46.3 2.9 60 224-284 507-576 (640)
110 cd07406 MPP_CG11883_N Drosophi 75.0 5.8 0.00012 37.8 5.4 56 63-123 21-82 (257)
111 KOG2476 Uncharacterized conser 73.7 7 0.00015 40.7 5.8 69 52-121 5-75 (528)
112 cd07407 MPP_YHR202W_N Saccharo 70.3 5.9 0.00013 38.6 4.3 66 54-124 7-97 (282)
113 COG0737 UshA 5'-nucleotidase/2 69.4 6.1 0.00013 41.5 4.5 68 52-124 26-115 (517)
114 KOG1432 Predicted DNA repair e 68.8 9 0.00019 38.6 5.2 46 79-125 100-148 (379)
115 KOG3339 Predicted glycosyltran 66.8 44 0.00096 31.1 8.8 85 81-170 40-140 (211)
116 PF14164 YqzH: YqzH-like prote 66.6 21 0.00045 27.3 5.6 47 1-47 1-47 (64)
117 cd07405 MPP_UshA_N Escherichia 65.7 8.2 0.00018 37.4 4.3 66 54-124 2-87 (285)
118 cd08162 MPP_PhoA_N Synechococc 64.8 11 0.00024 37.2 5.0 64 55-123 3-90 (313)
119 cd07382 MPP_DR1281 Deinococcus 62.2 18 0.00038 34.9 5.7 66 54-124 1-70 (255)
120 PTZ00235 DNA polymerase epsilo 60.0 33 0.00072 33.8 7.2 73 53-125 28-123 (291)
121 PRK09419 bifunctional 2',3'-cy 55.9 15 0.00032 42.8 4.7 66 53-123 42-138 (1163)
122 TIGR01390 CycNucDiestase 2',3' 55.8 15 0.00032 39.9 4.4 66 54-124 4-99 (626)
123 PRK09420 cpdB bifunctional 2', 55.8 16 0.00035 39.8 4.8 69 51-124 24-122 (649)
124 COG3855 Fbp Uncharacterized pr 51.6 12 0.00025 39.2 2.7 57 225-282 515-581 (648)
125 PTZ00422 glideosome-associated 51.1 29 0.00062 35.7 5.4 72 53-124 27-109 (394)
126 KOG3947 Phosphoesterases [Gene 46.5 28 0.00061 34.2 4.3 93 26-126 26-128 (305)
127 TIGR01530 nadN NAD pyrophospha 46.5 33 0.00072 36.5 5.3 41 79-124 49-94 (550)
128 PF06874 FBPase_2: Firmicute f 46.5 33 0.00071 37.2 5.1 37 81-122 186-222 (640)
129 PRK09558 ushA bifunctional UDP 42.9 34 0.00075 36.3 4.7 68 52-124 34-121 (551)
130 PRK11907 bifunctional 2',3'-cy 42.0 37 0.00079 38.2 4.9 67 53-124 116-213 (814)
131 PF02875 Mur_ligase_C: Mur lig 39.7 1.1E+02 0.0025 23.8 6.2 71 51-121 10-82 (91)
132 PF12641 Flavodoxin_3: Flavodo 38.7 1.5E+02 0.0033 26.4 7.5 102 56-176 2-116 (160)
133 PF10083 DUF2321: Uncharacteri 33.6 16 0.00034 32.8 0.3 48 221-274 20-76 (158)
134 KOG2310 DNA repair exonuclease 33.1 1.4E+02 0.003 32.2 7.1 54 53-106 14-79 (646)
135 KOG3462 Predicted membrane pro 30.3 84 0.0018 25.9 4.0 29 318-346 24-55 (105)
136 PF15007 CEP44: Centrosomal sp 29.2 25 0.00055 30.6 0.9 85 60-158 1-87 (131)
137 PRK09418 bifunctional 2',3'-cy 26.5 84 0.0018 35.2 4.5 67 52-123 39-141 (780)
138 PF09782 NDUF_B6: NADH:ubiquin 22.4 67 0.0014 28.9 2.3 23 341-363 98-121 (156)
139 KOG1378 Purple acid phosphatas 21.1 1.7E+02 0.0038 30.7 5.3 34 226-259 322-355 (452)
140 PF09637 Med18: Med18 protein; 20.2 1.6E+02 0.0035 28.0 4.6 39 224-265 139-177 (250)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-90 Score=634.16 Aligned_cols=301 Identities=46% Similarity=0.930 Sum_probs=285.8
Q ss_pred HHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 017614 5 VLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (368)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~v 84 (368)
++|..|++|.+. ..++++++..||.+++++|.+||+|+.++.|++||||||||+.||+.+|+..|.++.++|+
T Consensus 2 dldr~ie~L~~~-------~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YL 74 (303)
T KOG0372|consen 2 DLDRQIEQLRRC-------ELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYL 74 (303)
T ss_pred cHHHHHHHHHhc-------CCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceE
Confidence 578899999763 3688999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc-hHHHHHHHHHhccCCcEEEEcc
Q 017614 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDE 163 (368)
Q Consensus 85 FLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPlaaii~~ 163 (368)
|||||||||.+|+|++.+|++||++||++|++||||||++.+++.|||++||.+||+ ..+|+.+++.|++||++|+|++
T Consensus 75 FLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ 154 (303)
T KOG0372|consen 75 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDG 154 (303)
T ss_pred eecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecC
Confidence 999999999999999999999999999999999999999999999999999999995 6899999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEee
Q 017614 164 KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRA 243 (368)
Q Consensus 164 ~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRg 243 (368)
++||||||+||++.++|||+.+.|..++|+.+.++|+|||||++ ..||+.|+||+|+.||++++++|++.||+++|+||
T Consensus 155 kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee-~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~Ra 233 (303)
T KOG0372|consen 155 KIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEE-GPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRA 233 (303)
T ss_pred cEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCccc-CCCcccCCCCccccccHHHHHHHHHhCChHHHHHH
Confidence 99999999999999999999999999999999999999999985 47999999999999999999999999999999999
Q ss_pred ecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCCCCCccCcccccCCCCCCCCCCCCCc
Q 017614 244 HQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSRMKVRSY 323 (368)
Q Consensus 244 Hq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
||.|++||++.++++|+|||||||||++++|.||||.+|++....|.+|+.++..++ + .|.+++.++|
T Consensus 234 HQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~-----------~-~~~kk~~~~y 301 (303)
T KOG0372|consen 234 HQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR-----------G-IPAKKPIADY 301 (303)
T ss_pred HHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc-----------C-CcccCcchhh
Confidence 999999999999999999999999999999999999999999999999998876433 2 4445677788
Q ss_pred cc
Q 017614 324 LV 325 (368)
Q Consensus 324 ~~ 325 (368)
|+
T Consensus 302 Fl 303 (303)
T KOG0372|consen 302 FL 303 (303)
T ss_pred cC
Confidence 74
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1e-81 Score=616.72 Aligned_cols=294 Identities=70% Similarity=1.253 Sum_probs=282.1
Q ss_pred ChhHHHHHHHHHHhccC--CC-CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCC-C
Q 017614 2 DPAVLDGVIRRLLEVRG--KP-GKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGG-L 77 (368)
Q Consensus 2 ~~~~~~~~i~~l~~~~~--~~-~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g-~ 77 (368)
....++++|.++++... .+ .....++++++.+||..+.+++.++|+++++++||+||||||||+.||+++|+..| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 35667889999988652 11 22456999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc-hHHHHHHHHHhccCC
Q 017614 78 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLP 156 (368)
Q Consensus 78 ~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LP 156 (368)
|++++|||||||||||++|+|++.+|+++|++||+++++||||||++.+|+.|||++||.++|+ ..+|+.|+++|++||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred cEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCC
Q 017614 157 VAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD 236 (368)
Q Consensus 157 laaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~ 236 (368)
++|+|+++++|+|||+||.+.++++|+.|+||++.++.++++||+||||+.+..+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q 017614 237 LELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (368)
Q Consensus 237 l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~ 295 (368)
+++||||||++++||+++++++++||||||+|||+++|+||+|.||+++.|+|++++|.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999995
No 3
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2e-82 Score=578.04 Aligned_cols=291 Identities=44% Similarity=0.900 Sum_probs=279.7
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC
Q 017614 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPR 80 (368)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~ 80 (368)
|.+.++|++|+...+. ..|+++++..||+.++++|..|.+++.++.|++|||||||||.||+++|+..|--|+
T Consensus 1 m~~~d~d~wi~~vk~c-------kyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~ 73 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKC-------KYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPD 73 (306)
T ss_pred CCcCCHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCC
Confidence 4566889999998653 379999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc-hHHHHHHHHHhccCCcEE
Q 017614 81 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAA 159 (368)
Q Consensus 81 ~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPlaa 159 (368)
++|||+|||||||.+|+|+..+|++||.+||.+|.+||||||++.++++|||++||..+|+ ...|+.+.++|+.|++||
T Consensus 74 tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaA 153 (306)
T KOG0373|consen 74 TNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAA 153 (306)
T ss_pred cceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999995 689999999999999999
Q ss_pred EEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCce
Q 017614 160 LIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLEL 239 (368)
Q Consensus 160 ii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~ 239 (368)
+|+++++|||||+||++.++|||+-|.|-.++|+.+.+||++||||+. ++.|+-++||+|+.||.+++++|+..|++++
T Consensus 154 iID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~L 232 (306)
T KOG0373|consen 154 IIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNL 232 (306)
T ss_pred HhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHH
Confidence 999999999999999999999999999999999999999999999984 8999999999999999999999999999999
Q ss_pred EEeeecccccceEEecCce-EEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCCC
Q 017614 240 ICRAHQVVEDGYEFFANRR-LITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKP 299 (368)
Q Consensus 240 IIRgHq~v~~G~~~~~~~~-viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 299 (368)
|+|+||.|++||++.+++| ++|||||||||++++|.|+||.+|++++.++++|...+..+
T Consensus 233 icRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~ 293 (306)
T KOG0373|consen 233 ICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNS 293 (306)
T ss_pred HHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCcc
Confidence 9999999999999988887 99999999999999999999999999999999999876653
No 4
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.1e-78 Score=593.38 Aligned_cols=296 Identities=76% Similarity=1.393 Sum_probs=283.7
Q ss_pred hhHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCc
Q 017614 3 PAVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRS 81 (368)
Q Consensus 3 ~~~~~~~i~~l~~~~-~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~ 81 (368)
..+++++|+++++.+ ..++....|+++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..|+++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 445899999999866 3335556799999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEE
Q 017614 82 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI 161 (368)
Q Consensus 82 ~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii 161 (368)
+|||||||||||++|+||+.+++++|+.+|+++++||||||...++..|||..||..+|+..+|..++++|++||+||+|
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEE
Q 017614 162 DEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELIC 241 (368)
Q Consensus 162 ~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~II 241 (368)
++++|||||||+|.+.++++|++++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++|++++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred eeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCC
Q 017614 242 RAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 298 (368)
Q Consensus 242 RgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 298 (368)
||||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|++++|.+..
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 999999999999999999999999999999999999999999999999999987654
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3e-77 Score=578.79 Aligned_cols=290 Identities=81% Similarity=1.448 Sum_probs=279.5
Q ss_pred HHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 017614 6 LDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (368)
Q Consensus 6 ~~~~i~~l~~~~-~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~v 84 (368)
++++|+++++.+ ...+....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..|+++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 688999999865 3335666899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEccc
Q 017614 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEK 164 (368)
Q Consensus 85 FLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~ 164 (368)
|||||||||++|+|++.+++++|+.+|+++++||||||.+.++..|||.+||..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeee
Q 017614 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (368)
Q Consensus 165 il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgH 244 (368)
++|||||++|.+.++++|+.++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred cccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q 017614 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (368)
Q Consensus 245 q~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~ 295 (368)
|++++||+++++++|+||||||||||..+|+||+|.|+++++++|++++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 6
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=6.3e-77 Score=576.42 Aligned_cols=291 Identities=57% Similarity=1.124 Sum_probs=278.0
Q ss_pred hHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCce
Q 017614 4 AVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSN 82 (368)
Q Consensus 4 ~~~~~~i~~l~~~~-~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~ 82 (368)
..+|.+|+++++.. ..++....++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 35788999999865 23344557999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEc
Q 017614 83 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 162 (368)
Q Consensus 83 ~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~ 162 (368)
|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||.+++..+|+..+|+.+.++|++||++|+++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEe
Q 017614 163 EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICR 242 (368)
Q Consensus 163 ~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIR 242 (368)
++++|||||++|.+.++++|++++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999999
Q ss_pred eecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEcc
Q 017614 243 AHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 294 (368)
Q Consensus 243 gHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p 294 (368)
|||++++||+++++++|+||||||||||..+|+||+|.|++++.++|++++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999998763
No 7
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3.9e-76 Score=575.92 Aligned_cols=283 Identities=35% Similarity=0.627 Sum_probs=260.1
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCC
Q 017614 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGL 77 (368)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~----pi~VvGDIHG~~~dL~~ll~~~g~ 77 (368)
+.+.++.+|+++++.. .|+++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|+
T Consensus 3 ~~~~~~~~i~~~~~~~-------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~ 75 (321)
T cd07420 3 TKDHIDALIEAFKEKQ-------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGL 75 (321)
T ss_pred CHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCC
Confidence 4567899999998632 58999999999999999999999999986 899999999999999999999999
Q ss_pred CC-CceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc---hHHHHHHHHHhc
Q 017614 78 PP-RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN---VRLWKIFTDCFN 153 (368)
Q Consensus 78 ~~-~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~---~~l~~~~~~~f~ 153 (368)
++ .++|||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||++||..+|+ ..+|+.+.++|+
T Consensus 76 ~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~ 155 (321)
T cd07420 76 PSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFS 155 (321)
T ss_pred CCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHH
Confidence 85 46899999999999999999999999999999999999999999999999999999999997 789999999999
Q ss_pred cCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCC-----CCC----------------------chhHHHhhhcCCC
Q 017614 154 CLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTD-----VPE----------------------SGLLCDLLWSDPS 206 (368)
Q Consensus 154 ~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~-----~~~----------------------~~~~~dlLWsDP~ 206 (368)
+||+||+|++++|||||||+| ..++++|++|+|+.. .|. .++++|+|||||.
T Consensus 156 ~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~ 234 (321)
T cd07420 156 WLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPK 234 (321)
T ss_pred hCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCc
Confidence 999999999999999999997 578999999988421 111 1578899999998
Q ss_pred CCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCc
Q 017614 207 NDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLM 286 (368)
Q Consensus 207 ~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~ 286 (368)
+....|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.+++++.
T Consensus 235 ~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~ 314 (321)
T cd07420 235 AQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314 (321)
T ss_pred cCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCc
Confidence 65445777789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEE
Q 017614 287 CSFQIL 292 (368)
Q Consensus 287 ~~~~~~ 292 (368)
++|+++
T Consensus 315 ~~f~~~ 320 (321)
T cd07420 315 PHFVQY 320 (321)
T ss_pred eeEEEe
Confidence 998876
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=6e-76 Score=571.49 Aligned_cols=286 Identities=45% Similarity=0.922 Sum_probs=272.0
Q ss_pred HHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 017614 5 VLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (368)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~v 84 (368)
+++++|+++++. ..++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..|.++.++|+
T Consensus 2 ~~~~~~~~~~~~-------~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~l 74 (303)
T PTZ00239 2 DIDRHIATLLNG-------GCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYI 74 (303)
T ss_pred CHHHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 478899999763 1589999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhch-HHHHHHHHHhccCCcEEEEcc
Q 017614 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALIDE 163 (368)
Q Consensus 85 FLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~-~l~~~~~~~f~~LPlaaii~~ 163 (368)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+||..+|+. .+|+.+.++|++||++|++++
T Consensus 75 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~ 154 (303)
T PTZ00239 75 FIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEG 154 (303)
T ss_pred EeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcC
Confidence 9999999999999999999999999999999999999999999999999999999974 799999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEee
Q 017614 164 KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRA 243 (368)
Q Consensus 164 ~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRg 243 (368)
+++||||||+|.++++++|+.++||.+.|.++.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||
T Consensus 155 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 233 (303)
T PTZ00239 155 QILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRA 233 (303)
T ss_pred eEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Confidence 99999999999999999999999999999999999999999984 57899999999999999999999999999999999
Q ss_pred ecccccceEEecC-ceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCC
Q 017614 244 HQVVEDGYEFFAN-RRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 298 (368)
Q Consensus 244 Hq~v~~G~~~~~~-~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 298 (368)
||++++||++.++ ++|+|||||||||+..+|+||+|.++++++++|++++|.+..
T Consensus 234 He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 234 HQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred ChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 9999999998664 559999999999999999999999999999999999998664
No 9
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4.4e-76 Score=568.69 Aligned_cols=283 Identities=50% Similarity=0.982 Sum_probs=272.1
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEEE
Q 017614 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (368)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vF 85 (368)
++++|+++++. ..++++++.+||++|++++++||++++++.|++|+||||||+.+|.++|+..++++.++|||
T Consensus 2 ~~~~~~~~~~~-------~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lf 74 (285)
T cd07415 2 LDKWIEQLKKC-------ELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLF 74 (285)
T ss_pred HHHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 67889999763 15899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc-hHHHHHHHHHhccCCcEEEEccc
Q 017614 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDEK 164 (368)
Q Consensus 86 LGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPlaaii~~~ 164 (368)
||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|++||++|+++++
T Consensus 75 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~ 154 (285)
T cd07415 75 LGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQ 154 (285)
T ss_pred EeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCe
Confidence 99999999999999999999999999999999999999999999999999999997 48999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeee
Q 017614 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (368)
Q Consensus 165 il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgH 244 (368)
++||||||+|.+.++++|++++||.+.+..++++|+|||||.+. .+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 155 i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 233 (285)
T cd07415 155 IFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAH 233 (285)
T ss_pred EEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcC
Confidence 99999999999999999999999999999999999999999864 79999999999999999999999999999999999
Q ss_pred cccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCC
Q 017614 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 296 (368)
Q Consensus 245 q~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 296 (368)
|++++||++.++++|+|||||||||+..+|+||+|.|+++++++|.+++|.+
T Consensus 234 e~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 234 QLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999999999999999999999999998863
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=8.8e-74 Score=549.48 Aligned_cols=270 Identities=58% Similarity=1.072 Sum_probs=263.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHH
Q 017614 26 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLA 105 (368)
Q Consensus 26 l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~ 105 (368)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccC
Q 017614 106 YKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSL 185 (368)
Q Consensus 106 Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i 185 (368)
+|+.+|.++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++|+++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 186 PRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 186 ~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
+||.+.++.++++|+|||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q 017614 266 PNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (368)
Q Consensus 266 ~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~ 295 (368)
||||+..+|+||+|.++++++++|++++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999874
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.5e-73 Score=555.95 Aligned_cols=285 Identities=44% Similarity=0.827 Sum_probs=267.3
Q ss_pred HHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 017614 5 VLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (368)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~v 84 (368)
.++.+++.+.+. ..|+++++.+||++|+++|++||+++++++|++||||||||+.||.++|+..+.++.++||
T Consensus 2 ~~~~~~~~~~~~-------~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 2 RIDVLKAHFMRE-------GRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred CHHHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 356677777652 2589999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEccc
Q 017614 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEK 164 (368)
Q Consensus 85 FLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~ 164 (368)
|||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++|+++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCC------CcccC-CCCceeecChHHHHHHHHhCCC
Q 017614 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIK------GWEAN-DRGVSYVFGADRVTEFLQKHDL 237 (368)
Q Consensus 165 il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~------~~~~n-~rG~~~~FG~~~v~~fl~~n~l 237 (368)
++|||||++|.+.++++|++++||.+.|..++++|+|||||..... +|.+| +||.|+.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999975422 47776 8999999999999999999999
Q ss_pred ceEEeeecccccceEEecCc------eEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCC
Q 017614 238 ELICRAHQVVEDGYEFFANR------RLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 297 (368)
Q Consensus 238 ~~IIRgHq~v~~G~~~~~~~------~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 297 (368)
++||||||++++||++++++ +|+||||||||||.++|+||+|.++++. +.|+++.|.+.
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 99999999999999998876 8999999999999999999999999985 79999988754
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.3e-73 Score=558.18 Aligned_cols=287 Identities=41% Similarity=0.785 Sum_probs=269.8
Q ss_pred hhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----eEEEecCCCCHHHHHHHHHhCCCC
Q 017614 3 PAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAP----IKICGDIHGQYSDLLRLFEYGGLP 78 (368)
Q Consensus 3 ~~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~p----i~VvGDIHG~~~dL~~ll~~~g~~ 78 (368)
...++++|+++.+. ..|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..|++
T Consensus 13 ~~~~~~~~~~~~~~-------~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~ 85 (316)
T cd07417 13 LEFVKEMIEWFKDQ-------KKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLP 85 (316)
T ss_pred HHHHHHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCC
Confidence 45677888888652 1589999999999999999999999999876 999999999999999999999987
Q ss_pred CC-ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCc
Q 017614 79 PR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPV 157 (368)
Q Consensus 79 ~~-~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl 157 (368)
+. ++|||||||||||++|+||+.+++++|+.+|+++++||||||.+.++..|||..|+..+|+..+|+.+.++|++||+
T Consensus 86 ~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LPl 165 (316)
T cd07417 86 SETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLPL 165 (316)
T ss_pred CccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhchH
Confidence 65 46999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccEEEecCCC-CCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCC
Q 017614 158 AALIDEKILCMHGGL-SPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD 236 (368)
Q Consensus 158 aaii~~~il~vHGGi-sp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~ 236 (368)
+|+++++++|||||+ +|...+++++++++||.+.+++++++|+|||||.+. .+|.+|+||.|+.||++++++||++||
T Consensus 166 aaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n~ 244 (316)
T cd07417 166 AHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEENN 244 (316)
T ss_pred hheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHcC
Confidence 999999999999999 567899999999999999999999999999999854 689999999999999999999999999
Q ss_pred CceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcC-CCceEEEEEccCCC
Q 017614 237 LELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDE-TLMCSFQILKPADK 297 (368)
Q Consensus 237 l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~-~~~~~~~~~~p~~~ 297 (368)
+++||||||++++||++.++++|+|||||||||+..+|+||+|.|++ +++++|++++|.+.
T Consensus 245 l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 245 LEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred CcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCC
Confidence 99999999999999999999999999999999999999999999999 89999999988744
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3.9e-72 Score=547.56 Aligned_cols=286 Identities=47% Similarity=0.880 Sum_probs=266.4
Q ss_pred HHHHHHhcc-CCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC-----
Q 017614 9 VIRRLLEVR-GKP--GKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPR----- 80 (368)
Q Consensus 9 ~i~~l~~~~-~~~--~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~----- 80 (368)
+|.+++++. ..+ ..+..|+++++.+||++|+++|++||+++++++|+.||||||||+.+|.++|+..|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 477888877 322 456789999999999999999999999999999999999999999999999999998754
Q ss_pred ---ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhch------HHHHHHHHH
Q 017614 81 ---SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV------RLWKIFTDC 151 (368)
Q Consensus 81 ---~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~------~l~~~~~~~ 151 (368)
.+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..+|..+++. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999864 699999999
Q ss_pred hccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCC-CCCCchhHHHhhhcCCCCC--CCCcccCC---CCce--eec
Q 017614 152 FNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPT-DVPESGLLCDLLWSDPSND--IKGWEAND---RGVS--YVF 223 (368)
Q Consensus 152 f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~-~~~~~~~~~dlLWsDP~~~--~~~~~~n~---rG~~--~~F 223 (368)
|++||++|+++++++|||||++|.+.++++|+.++||. +.+..++++|+|||||... ..+|.+|+ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4466788999999999864 45787776 9988 799
Q ss_pred ChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEcc
Q 017614 224 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 294 (368)
Q Consensus 224 G~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p 294 (368)
|++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||+|.+++++++++++++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-73 Score=526.31 Aligned_cols=300 Identities=46% Similarity=0.913 Sum_probs=285.1
Q ss_pred HHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 017614 5 VLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (368)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~v 84 (368)
.++..|++|.+. ..+++.++..+|+.|+++|.+|.++..++.|++||||+||||++|+++|+..|..+++.|+
T Consensus 19 ~vd~~ie~L~~c-------k~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 19 DVDPWIEQLYKC-------KPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred ccccchHHHHhc-------CCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 356778888663 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHh-chHHHHHHHHHhccCCcEEEEcc
Q 017614 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDE 163 (368)
Q Consensus 85 FLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~-~~~l~~~~~~~f~~LPlaaii~~ 163 (368)
|+|||||||++|+|++.+|.++|++||++|.+||||||++++.++|||++||.+|| +..+|+.|.+.|+++|++|.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 57899999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEee
Q 017614 164 KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRA 243 (368)
Q Consensus 164 ~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRg 243 (368)
+|||+|||+||++.++++++.+.|..++|.++.+||+|||||+ +.-+|+.++||+++.||.+..++|-.+||+++|.|+
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpd-dr~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcc-cCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 9999999999999999999999999999999999999999998 468999999999999999999999999999999999
Q ss_pred ecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCCCCCccCcccccCCCCCCCCCCCCCc
Q 017614 244 HQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSRMKVRSY 323 (368)
Q Consensus 244 Hq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
||.+++||.+.+...++|||||||||++++|.+|+|.++++...+|..|+|++.+ .+|..++++++|
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k-------------~e~~vtr~tpDY 317 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK-------------VEPDVTRKTPDY 317 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc-------------cccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999997543 456777889999
Q ss_pred cc
Q 017614 324 LV 325 (368)
Q Consensus 324 ~~ 325 (368)
||
T Consensus 318 fL 319 (319)
T KOG0371|consen 318 FL 319 (319)
T ss_pred cC
Confidence 86
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=9.2e-69 Score=532.03 Aligned_cols=292 Identities=34% Similarity=0.626 Sum_probs=257.2
Q ss_pred hhHHHHHHHHHHhcc-C-C-CCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHHHHHHhC
Q 017614 3 PAVLDGVIRRLLEVR-G-K-PGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIE----APIKICGDIHGQYSDLLRLFEYG 75 (368)
Q Consensus 3 ~~~~~~~i~~l~~~~-~-~-~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~----~pi~VvGDIHG~~~dL~~ll~~~ 75 (368)
.+.++.+|+++.... . . ......++++++.+||++|+++|++||++++++ .|++||||||||+.+|.++|+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~ 88 (377)
T cd07418 9 NEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDA 88 (377)
T ss_pred HHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHh
Confidence 456778888876532 1 1 122245889999999999999999999999998 89999999999999999999999
Q ss_pred CCCCC-ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhch---HHHHHHHHH
Q 017614 76 GLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV---RLWKIFTDC 151 (368)
Q Consensus 76 g~~~~-~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~---~l~~~~~~~ 151 (368)
|+++. ..|||||||||||++|+||+.+|+++|+.+|+++++||||||...++..|||.+||..+|+. .+|+.+.++
T Consensus 89 g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~ 168 (377)
T cd07418 89 GFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGC 168 (377)
T ss_pred CCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHH
Confidence 99875 45999999999999999999999999999999999999999999999999999999999964 699999999
Q ss_pred hccCCcEEEEcccEEEecCCC---------------------------CCCCCChhhhccCCCCC-CCCCch---hHHHh
Q 017614 152 FNCLPVAALIDEKILCMHGGL---------------------------SPDLHNLNQIRSLPRPT-DVPESG---LLCDL 200 (368)
Q Consensus 152 f~~LPlaaii~~~il~vHGGi---------------------------sp~~~~l~~I~~i~Rp~-~~~~~~---~~~dl 200 (368)
|++||++|++++++||||||| +|.+.++++|++++||. +.+..+ +++|+
T Consensus 169 f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dl 248 (377)
T cd07418 169 FEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDV 248 (377)
T ss_pred HHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceee
Confidence 999999999999999999999 44567999999999984 666554 57899
Q ss_pred hhcCCCCCCCCcccC-CCCceeecChHHHHHHHHhCCCceEEeeecc------------cccceEEecC---ceEEEEec
Q 017614 201 LWSDPSNDIKGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQV------------VEDGYEFFAN---RRLITIFS 264 (368)
Q Consensus 201 LWsDP~~~~~~~~~n-~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~------------v~~G~~~~~~---~~viTIFS 264 (368)
|||||... .+|.+| +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+||||
T Consensus 249 LWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFS 327 (377)
T cd07418 249 LWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFS 327 (377)
T ss_pred EeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEec
Confidence 99999864 677776 7999999999999999999999999999996 6899999886 89999999
Q ss_pred CCCCC------CCCCCeEEEEEEcCCC--ceEEEEEccC
Q 017614 265 APNYC------GEFDNAGAMMSVDETL--MCSFQILKPA 295 (368)
Q Consensus 265 a~nY~------~~~~N~ga~l~i~~~~--~~~~~~~~p~ 295 (368)
||||| +.++|+||+|.++.+- ..+|.+++.+
T Consensus 328 a~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 328 APDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred CCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99999 6789999999996643 5667776644
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.5e-69 Score=516.88 Aligned_cols=272 Identities=43% Similarity=0.855 Sum_probs=256.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHH
Q 017614 25 QLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLL 104 (368)
Q Consensus 25 ~l~~~~i~~L~~~a~~il~~ep~ll~l~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~ 104 (368)
.++++....++.++..+|++|++++++++||+|||||||||.||+++|+..|.|.+++|+|||||||||.+|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhcc
Q 017614 105 AYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRS 184 (368)
Q Consensus 105 ~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~ 184 (368)
+||+.||..+++|||||||+.++..+.|..||.-+|+.++|+++.+.|++||+||+.+++++|||||+||++.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHhhhcCCCCCC------CCcccC-CCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCc
Q 017614 185 LPRPTDVPESGLLCDLLWSDPSNDI------KGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 257 (368)
Q Consensus 185 i~Rp~~~~~~~~~~dlLWsDP~~~~------~~~~~n-~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~ 257 (368)
+.|..++|..|.+||||||||.++. +.|..| -||+++.|...|+.+||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998642 345555 699999999999999999999999999999999999987654
Q ss_pred ------eEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCC
Q 017614 258 ------RLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 297 (368)
Q Consensus 258 ------~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 297 (368)
.+|||||||||.+.++|+||||+.+++. +.+.+|..++.
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSPH 344 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 344 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCCC
Confidence 4899999999999999999999998885 45666655443
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-56 Score=440.74 Aligned_cols=284 Identities=34% Similarity=0.621 Sum_probs=252.1
Q ss_pred hHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHHHHHHhCCCCC
Q 017614 4 AVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIE----APIKICGDIHGQYSDLLRLFEYGGLPP 79 (368)
Q Consensus 4 ~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l~----~pi~VvGDIHG~~~dL~~ll~~~g~~~ 79 (368)
..++.+|+-... +..|++..+..++.+|+++|++.|++-+++ ..|+||||+||.++||.-+|-+.|+|+
T Consensus 119 ~~i~~lieaFk~-------kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS 191 (631)
T KOG0377|consen 119 NHIDLLIEAFKK-------KQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPS 191 (631)
T ss_pred hHHHHHHHHHHH-------hhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCC
Confidence 445666666533 237899999999999999999999999985 469999999999999999999999997
Q ss_pred Cc-eEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHh---chHHHHHHHHHhccC
Q 017614 80 RS-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF---NVRLWKIFTDCFNCL 155 (368)
Q Consensus 80 ~~-~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~---~~~l~~~~~~~f~~L 155 (368)
.+ .|||.||+||||.+|+||+++|+++-+.||..+++-|||||...+|-.|||..|+..+| +.++.+.+.++|++|
T Consensus 192 ~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WL 271 (631)
T KOG0377|consen 192 SSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWL 271 (631)
T ss_pred CCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhc
Confidence 65 59999999999999999999999999999999999999999999999999999999999 578999999999999
Q ss_pred CcEEEEcccEEEecCCCCCCCCChhhhccCCCC---------CCC-------------CCchhHHHhhhcCCCCCCCCcc
Q 017614 156 PVAALIDEKILCMHGGLSPDLHNLNQIRSLPRP---------TDV-------------PESGLLCDLLWSDPSNDIKGWE 213 (368)
Q Consensus 156 Plaaii~~~il~vHGGisp~~~~l~~I~~i~Rp---------~~~-------------~~~~~~~dlLWsDP~~~~~~~~ 213 (368)
|++.+|+++|++||||+| +.++++-+.+|+|- ++. .+...+.|+|||||.....+|.
T Consensus 272 Pi~tiid~~ilvvHGGiS-d~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~p 350 (631)
T KOG0377|consen 272 PIGTIIDSRILVVHGGIS-DSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVP 350 (631)
T ss_pred chhhhcccceEEEecCcc-cchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCc
Confidence 999999999999999998 45667777666652 211 1235688999999997655666
Q ss_pred cCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEc
Q 017614 214 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 293 (368)
Q Consensus 214 ~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~~~~~~~~~~ 293 (368)
..-||.|++||+|++.+||++++++++||+|||.++|||+.++++|+|||||+||....+|+||++++.+.++..|.+..
T Consensus 351 Nt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 351 NTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred ccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 55799999999999999999999999999999999999999999999999999999999999999999999988877665
Q ss_pred cC
Q 017614 294 PA 295 (368)
Q Consensus 294 p~ 295 (368)
.+
T Consensus 431 a~ 432 (631)
T KOG0377|consen 431 AA 432 (631)
T ss_pred hh
Confidence 43
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.2e-52 Score=413.50 Aligned_cols=273 Identities=43% Similarity=0.836 Sum_probs=257.0
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCCCCCc-eEEEeccccCCCCCcHHH
Q 017614 25 QLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQSLET 99 (368)
Q Consensus 25 ~l~~~~i~~L~~~a~~il~~ep~ll~l~~----pi~VvGDIHG~~~dL~~ll~~~g~~~~~-~~vFLGDyVDRG~~slEv 99 (368)
.++..-+-+|+..++++++++|++++++. .+.|+||+|||+.++++++...|.|+.+ .|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 46677778899999999999999999864 4899999999999999999999998765 699999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCC-CCCCC
Q 017614 100 ICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLS-PDLHN 178 (368)
Q Consensus 100 l~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGis-p~~~~ 178 (368)
+..+++.|+.+|+++|++|||||+..+++.|||.+++..+|.++.+..+.++|..||++-.|+++++.+|||+. |.-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995 45578
Q ss_pred hhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCce
Q 017614 179 LNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRR 258 (368)
Q Consensus 179 l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~ 258 (368)
++++++|.|+...|+.+.++++|||||... .|.+++.||.|..||++++++||+.|+++.|||||++.+.||+..++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988889999999999999864 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCeEEEEEEc-CCCceEEEEEccCCCC
Q 017614 259 LITIFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPADKK 298 (368)
Q Consensus 259 viTIFSa~nY~~~~~N~ga~l~i~-~~~~~~~~~~~p~~~~ 298 (368)
|+|||||||||+..+|.||++.++ +++...+..|+|++..
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 999999999999999999999999 7788888899888653
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2.6e-36 Score=278.96 Aligned_cols=214 Identities=52% Similarity=0.839 Sum_probs=179.3
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHH
Q 017614 56 KICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 135 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e 135 (368)
+|||||||++++|.++++..+.++.+.+||||||||||+.+.|++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 489999999999999999999988899999999999999999999999999877 8899999999999887766655443
Q ss_pred H---------HHHhchHHHHHHHHHhccCCcEEEEcc-cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCC
Q 017614 136 C---------KRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDP 205 (368)
Q Consensus 136 ~---------~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP 205 (368)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 233356788889999999999999987 99999999999876655544 2334456789999999
Q ss_pred CCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEE
Q 017614 206 SNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMS 280 (368)
Q Consensus 206 ~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~ 280 (368)
.........+.++. |+++.+.|++.++.+.|||||+++.+|+.....++++||+|++.|++..+|.++.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85433344444554 999999999999999999999999999876678899999999999987788877664
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.93 E-value=2.7e-25 Score=210.57 Aligned_cols=122 Identities=24% Similarity=0.401 Sum_probs=97.0
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC---------CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP---------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~---------~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
+++.||||||||++.|.++|+.+++. ..+++|||||||||||+|.||+.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998873 46789999999999999999999998874 56689999999998
Q ss_pred cccccccC-------ChHHHHHHh-------chHHHHHHHHHhccCCcEEEEc-ccEEEecCCCCCCC
Q 017614 124 ASVNRVYG-------FYDECKRRF-------NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDL 176 (368)
Q Consensus 124 ~~i~~~~g-------f~~e~~~~~-------~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGisp~~ 176 (368)
+.++...+ ...+....| ...+.+.+.+++++||++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 76543211 011222222 1346778899999999998774 57999999998763
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.93 E-value=4.3e-25 Score=204.60 Aligned_cols=175 Identities=22% Similarity=0.354 Sum_probs=129.7
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--------CCCceEEEeccccCCCCCcHHHHHHHHHhhhh---CCCcEEEEccccccc
Q 017614 56 KICGDIHGQYSDLLRLFEYGGL--------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 124 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll~~~g~--------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~---~P~~v~lLRGNHE~~ 124 (368)
+||||||||+++|.++|+.++. .+.+.+||+||+||||+++.||+.+++.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 467899999999999
Q ss_pred ccccccCCh--HHHHHHhc-----hHH---HHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCc
Q 017614 125 SVNRVYGFY--DECKRRFN-----VRL---WKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPES 194 (368)
Q Consensus 125 ~i~~~~gf~--~e~~~~~~-----~~l---~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~ 194 (368)
.++..+.+. .+...... ..+ -..+.+|++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 887544322 11111000 111 134578999999998876 79999999932
Q ss_pred hhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 195 GLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 195 ~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
+|++.-.... .+.+ =|+..++++++.++.++||+||++++.|....+++++++|.++
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 3332110000 0000 0125688999999999999999999988766789999999884
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.90 E-value=7.2e-23 Score=192.42 Aligned_cols=121 Identities=26% Similarity=0.493 Sum_probs=97.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCC----------CceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPP----------RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 122 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~----------~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE 122 (368)
+|+.||||||||+.+|.++|+.+++.+ .++++|||||||||++|.||+.+|.+++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999998753 45899999999999999999999998863 457999999999
Q ss_pred ccccccc--------cCChHHHHHHh---chHHHHHHHHHhccCCcEEEEc-ccEEEecCCCCCCC
Q 017614 123 CASVNRV--------YGFYDECKRRF---NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDL 176 (368)
Q Consensus 123 ~~~i~~~--------~gf~~e~~~~~---~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGisp~~ 176 (368)
.+.++.. .|+.. ....+ ...+.+...+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 8765432 23322 22233 2457788899999999998776 47999999988653
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.90 E-value=9.9e-23 Score=196.35 Aligned_cols=217 Identities=18% Similarity=0.305 Sum_probs=141.9
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
|.++||||||||+++|.++++.+++. ..+.++||||+|||||+|.||+.++..+ +.++++|+||||...++..+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57899999999999999999999874 5678999999999999999999999876 457999999999987665555
Q ss_pred Ch-----HHHHHHhchHHHHHHHHHhccCCcEEEE-cccEEEecCCCCCCCCChhhh----ccCCCCCCCCCc-hhHHHh
Q 017614 132 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALI-DEKILCMHGGLSPDLHNLNQI----RSLPRPTDVPES-GLLCDL 200 (368)
Q Consensus 132 f~-----~e~~~~~~~~l~~~~~~~f~~LPlaaii-~~~il~vHGGisp~~~~l~~I----~~i~Rp~~~~~~-~~~~dl 200 (368)
.. +...........+...+|++.+|+...+ ++++++||||++|.+. +++. ++++..+.-++. ..+..+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~-~~~~~~~a~eve~~l~~~~~~~~~~~m 155 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD-LATALALAREVEAVLRSDDYRDFLANM 155 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC-HHHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 32 1222222334556788999999998776 5689999999999863 2221 112222222222 344555
Q ss_pred hhcCCCCCCCCcccCCCCce-eecChHHHH--HHHHhC-----------------------------CCceEEeeecccc
Q 017614 201 LWSDPSNDIKGWEANDRGVS-YVFGADRVT--EFLQKH-----------------------------DLELICRAHQVVE 248 (368)
Q Consensus 201 LWsDP~~~~~~~~~n~rG~~-~~FG~~~v~--~fl~~n-----------------------------~l~~IIRgHq~v~ 248 (368)
.|+.|. .|.++-.|.. ..|--.++. +||... .-..||-||.+..
T Consensus 156 y~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 156 YGNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred cCCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 555553 2444333321 111111110 122221 2347999999987
Q ss_pred cceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCC
Q 017614 249 DGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET 284 (368)
Q Consensus 249 ~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~ 284 (368)
.|... ...++.+=|.--+ +++=..|.++..
T Consensus 232 ~G~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred CCccC--CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 78765 4567888776544 344455777644
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.90 E-value=8.8e-23 Score=190.86 Aligned_cols=115 Identities=23% Similarity=0.364 Sum_probs=90.9
Q ss_pred EEEecCCCCHHHHHHHHHhCCCC--------CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccc
Q 017614 56 KICGDIHGQYSDLLRLFEYGGLP--------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVN 127 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll~~~g~~--------~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~ 127 (368)
.||||||||++.|.++|+.+++. +.+.+|||||||||||+|.||+.+|+.++ .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 68999999999999999998774 46789999999999999999999999885 345899999999987653
Q ss_pred cccC------------C-----hHHHHHHh--chHHHHHHHHHhccCCcEEEEcccEEEecCCCC
Q 017614 128 RVYG------------F-----YDECKRRF--NVRLWKIFTDCFNCLPVAALIDEKILCMHGGLS 173 (368)
Q Consensus 128 ~~~g------------f-----~~e~~~~~--~~~l~~~~~~~f~~LPlaaii~~~il~vHGGis 173 (368)
...+ . ..+..+.+ ..+..+...+|++.||+.... +++++||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 2111 0 01222222 234567889999999999765 58999999986
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.89 E-value=3.8e-23 Score=197.43 Aligned_cols=119 Identities=27% Similarity=0.395 Sum_probs=98.2
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCCh
Q 017614 55 IKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (368)
Q Consensus 55 i~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~ 133 (368)
++||||||||+++|.++|+.+++. +.+.++|+||+|||||+|+||+.++..++ .++++|+||||...++..+|..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 479999999999999999999875 57889999999999999999999999875 5799999999998776555542
Q ss_pred -----HHHHHHhchHHHHHHHHHhccCCcEEEEcc-cEEEecCCCCCCCC
Q 017614 134 -----DECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLH 177 (368)
Q Consensus 134 -----~e~~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGisp~~~ 177 (368)
+...+.+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 222222233445678899999999988765 89999999999873
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.88 E-value=1.4e-22 Score=194.73 Aligned_cols=121 Identities=22% Similarity=0.354 Sum_probs=101.0
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
|.++||||||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++. +++++|+||||...++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999975 46789999999999999999999998763 56889999999988776666
Q ss_pred C-----hHHHHHHhchHHHHHHHHHhccCCcEEEEc-ccEEEecCCCCCCCC
Q 017614 132 F-----YDECKRRFNVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDLH 177 (368)
Q Consensus 132 f-----~~e~~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGisp~~~ 177 (368)
+ .+.....+.....+...+|++.+|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 4 233333345567788999999999987654 369999999999873
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.86 E-value=1.9e-21 Score=181.12 Aligned_cols=115 Identities=25% Similarity=0.321 Sum_probs=88.0
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
++++||||||||+.+|.++|+.+++. ..++++||||+|||||+|.||+.+|.. .+++.|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999854 25789999999877653211
Q ss_pred ChH--------HHHHHh---chHHHHHHHHHhccCCcEEEEc---ccEEEecCCCC
Q 017614 132 FYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 173 (368)
Q Consensus 132 f~~--------e~~~~~---~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGis 173 (368)
-.. +....+ ..+.+....++++.||+...++ +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 100 000111 1234556678999999987653 47999999984
No 28
>PHA02239 putative protein phosphatase
Probab=99.85 E-value=1.1e-20 Score=178.44 Aligned_cols=172 Identities=22% Similarity=0.297 Sum_probs=117.9
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC--CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccccccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP--PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVY 130 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~--~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~ 130 (368)
|++++||||||++..|.++++.+... +.+.+||+|||||||++|.|++..++.+. ..+.++++|+||||.+.+....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 47899999999999999999987532 46789999999999999999999998874 3566899999999986443110
Q ss_pred -----CCh---------HHHHHHhc-------------------------------hHHHHHHHHHhccCCcEEEEcccE
Q 017614 131 -----GFY---------DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALIDEKI 165 (368)
Q Consensus 131 -----gf~---------~e~~~~~~-------------------------------~~l~~~~~~~f~~LPlaaii~~~i 165 (368)
+.. .+....|+ ...+..+.+|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 000 11122331 11334556789999999665 489
Q ss_pred EEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeec
Q 017614 166 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQ 245 (368)
Q Consensus 166 l~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq 245 (368)
++||||+.|... +++ ....+++|.+. . .+. ..=+.||-||+
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~-------------------~~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPR-------------------KDGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCC-------------------CCCcEEEECCC
Confidence 999999987633 221 12368999885 1 111 11247899999
Q ss_pred ccccceEEecCceEEEEecCC
Q 017614 246 VVEDGYEFFANRRLITIFSAP 266 (368)
Q Consensus 246 ~v~~G~~~~~~~~viTIFSa~ 266 (368)
++.++..... ++.|.|-+..
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCCCCccccc-CCEEEeecCc
Confidence 9876543322 3346666544
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.85 E-value=3.8e-21 Score=177.38 Aligned_cols=169 Identities=23% Similarity=0.332 Sum_probs=115.5
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
++++|+|||||++.+|.++++..+.. ..+.++|+||+||||+++.|++.++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998875 467799999999999999999988854 36899999999987765443
Q ss_pred --ChHHHHHHh---------chHHHHHHHHHhccCCcEEEEc---ccEEEecCCCCCCCCChhhhccCCCCCCCCCchhH
Q 017614 132 --FYDECKRRF---------NVRLWKIFTDCFNCLPVAALID---EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLL 197 (368)
Q Consensus 132 --f~~e~~~~~---------~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~ 197 (368)
...+...+. ..++++...++++.||+...++ .++++||||+++... ...+. + +..+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 222221121 1225666888999999998775 369999999865431 11110 0 11122334
Q ss_pred HHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceE
Q 017614 198 CDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (368)
Q Consensus 198 ~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~ 252 (368)
.+++|++|... ... +...-+.+.||-||+.++..+.
T Consensus 149 ~~~~w~~~~~~-----~~~--------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQ-----KAQ--------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhh-----hcC--------------ccccCCCCEEEECCCCCCcceE
Confidence 67889876421 000 0001145779999999876443
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.85 E-value=2.2e-20 Score=180.41 Aligned_cols=148 Identities=24% Similarity=0.315 Sum_probs=107.2
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCC------CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCC-cEEEEccccccccc
Q 017614 54 PIKICGDIHGQYSDLLRLFEYGGL------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASV 126 (368)
Q Consensus 54 pi~VvGDIHG~~~dL~~ll~~~g~------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~-~v~lLRGNHE~~~i 126 (368)
++++||||||+++.|.++|+.+.. +..+.+||||||||||++|.||+.+|.+++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 689999999999999999986532 12457999999999999999999999999988876 68999999995543
Q ss_pred cccc---------CC------------------------------------------------------hHHHHHHhc--
Q 017614 127 NRVY---------GF------------------------------------------------------YDECKRRFN-- 141 (368)
Q Consensus 127 ~~~~---------gf------------------------------------------------------~~e~~~~~~-- 141 (368)
.-.. .| -.+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 2110 00 012233343
Q ss_pred -------hHHHHHHHHHhccCCcEEEEcccE-------------EEecCCCCCCCCChhhhccCC-CCCCCCCchhHHHh
Q 017614 142 -------VRLWKIFTDCFNCLPVAALIDEKI-------------LCMHGGLSPDLHNLNQIRSLP-RPTDVPESGLLCDL 200 (368)
Q Consensus 142 -------~~l~~~~~~~f~~LPlaaii~~~i-------------l~vHGGisp~~~~l~~I~~i~-Rp~~~~~~~~~~dl 200 (368)
..+-+...+|++.||.....+ .+ +|||||+-|...--+|.+.+. +-+..|. .|+
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 234556789999999986654 55 999999999987666766543 2222332 277
Q ss_pred hhcCCC
Q 017614 201 LWSDPS 206 (368)
Q Consensus 201 LWsDP~ 206 (368)
||.+..
T Consensus 238 l~~R~~ 243 (304)
T cd07421 238 LSGRKN 243 (304)
T ss_pred cccchh
Confidence 887764
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.80 E-value=2.9e-19 Score=166.69 Aligned_cols=115 Identities=25% Similarity=0.286 Sum_probs=85.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
.++.||||||||+++|.++++...+. ..+.++||||+||||++|.||+.+|.+ .+++.||||||.+.+....+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998854 467889999999999999999998853 36889999999877643211
Q ss_pred C-hH-------HHHHHhch---HHHHHHHHHhccCCcEEEEc---ccEEEecCCCC
Q 017614 132 F-YD-------ECKRRFNV---RLWKIFTDCFNCLPVAALID---EKILCMHGGLS 173 (368)
Q Consensus 132 f-~~-------e~~~~~~~---~l~~~~~~~f~~LPlaaii~---~~il~vHGGis 173 (368)
- .. +....+.. .......++++.||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 0 00 00011111 22334456899999997664 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.40 E-value=3.6e-12 Score=106.89 Aligned_cols=159 Identities=24% Similarity=0.275 Sum_probs=103.1
Q ss_pred CceEEEecCCCCHHHH----HHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHH--HHhhhhCCCcEEEEccccccccc
Q 017614 53 APIKICGDIHGQYSDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASV 126 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL----~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL--~~Lki~~P~~v~lLRGNHE~~~i 126 (368)
++|.++||+|+..... ..+.......+.+.+|++||++|+|..+.+..... ...+...+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 33444444455677899999999999988877654 55566678899999999997765
Q ss_pred ccccCChHHHH----------------------------------HHhchHHHHHHHHHhccCCcEEEEcccEEEecCCC
Q 017614 127 NRVYGFYDECK----------------------------------RRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGL 172 (368)
Q Consensus 127 ~~~~gf~~e~~----------------------------------~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi 172 (368)
...+....... ........+....+......+......++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 43222111111 00111112222222333334444556899999999
Q ss_pred CCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeeccc
Q 017614 173 SPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 247 (368)
Q Consensus 173 sp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v 247 (368)
.+......+. .....+.+.+..++++.++++++.||+-.
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 8653321111 12346678899999999999999999853
No 33
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.21 E-value=9.7e-12 Score=105.00 Aligned_cols=144 Identities=40% Similarity=0.659 Sum_probs=121.8
Q ss_pred cccccCChHHHHHHhchH-HHHH---HHHHhccCCcEEEEcc-cEEEecCCCCCCC-CChhhhccCCCCC--CCCCchhH
Q 017614 126 VNRVYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-HNLNQIRSLPRPT--DVPESGLL 197 (368)
Q Consensus 126 i~~~~gf~~e~~~~~~~~-l~~~---~~~~f~~LPlaaii~~-~il~vHGGisp~~-~~l~~I~~i~Rp~--~~~~~~~~ 197 (368)
++..+|+.+++...++.. .|.. ..++|+.+|+++++++ .++|.|||++|.+ ..+++++.+.|.. ++...+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 445677888877777654 6766 9999999999999998 9999999999976 6788888877765 66777888
Q ss_pred HHhhhcCCCCC-CCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCC
Q 017614 198 CDLLWSDPSND-IKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCG 270 (368)
Q Consensus 198 ~dlLWsDP~~~-~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~ 270 (368)
.+.+|++|... ...|.++++|.+..+ .+....|+..+..+.+.++|+.+..++.....+..+|.||+++||.
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 88899999863 688999999998877 7888999988888889999999999998877768999999999973
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.12 E-value=1.3e-09 Score=94.19 Aligned_cols=137 Identities=22% Similarity=0.313 Sum_probs=85.6
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 132 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf 132 (368)
|++.++||+|++..++.++++.+ ...+.++++||++|+ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 345678899999993 6766666444 69999999996543322110
Q ss_pred hHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCc
Q 017614 133 YDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGW 212 (368)
Q Consensus 133 ~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~ 212 (368)
. . +.+.... ..-..+++++||....
T Consensus 69 ~----------~------~~~~~~~-~~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 E----------Y------LLDALRL-TIDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp C----------S------SHSEEEE-EETTEEEEEESSTSSS--------------------------------------
T ss_pred c----------c------cccceee-eecCCeEEEECCCCcc--------------------------------------
Confidence 0 0 1111111 1224589999997653
Q ss_pred ccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 213 EANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 213 ~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
...+.+.+.+.+...+.++++-||.-.+.-.+ ..+..+++.-|.
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 01344556777789999999999998744433 334445554443
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.10 E-value=4.7e-09 Score=91.67 Aligned_cols=83 Identities=25% Similarity=0.355 Sum_probs=63.8
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCCh
Q 017614 54 PIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (368)
Q Consensus 54 pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~ 133 (368)
++.++||+||+...+.++++.... .+.++++||++++|..+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 478999999999999999998654 578999999999998765 1 233469999999997532
Q ss_pred HHHHHHhchHHHHHHHHHhccCCcEEEEc---ccEEEecCCCC
Q 017614 134 DECKRRFNVRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 173 (368)
Q Consensus 134 ~e~~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGis 173 (368)
+..+|....++ .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 35567554443 37999999764
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=98.99 E-value=1.6e-09 Score=97.90 Aligned_cols=68 Identities=22% Similarity=0.333 Sum_probs=54.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCC--------cHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~--------slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
|++.|+||+||++.++.++++.+...+.+.++++||++|+|++ +.+++..+..+ ...+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 5799999999999999999987655566789999999999874 45566555432 34699999999964
No 37
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.95 E-value=2.1e-08 Score=88.30 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=48.1
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
|++.|+||+||+..++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998777666655444 567789999999 467776665442 2599999999973
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.83 E-value=3.8e-08 Score=84.50 Aligned_cols=118 Identities=20% Similarity=0.222 Sum_probs=78.5
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcH--HHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 54 PIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 54 pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~sl--Evl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
++.++||+||++. .......+.++++||++++|..+- +.+.++..++ .| .++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999977 112344567889999999986432 2333333321 22 36789999996421
Q ss_pred ChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCC
Q 017614 132 FYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKG 211 (368)
Q Consensus 132 f~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~ 211 (368)
.-+.+++++||.+.+.... .+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~~~----------------------~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHLDL----------------------VS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCccc----------------------cc--c------
Confidence 1134799999954321000 00 0
Q ss_pred cccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceE
Q 017614 212 WEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (368)
Q Consensus 212 ~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~ 252 (368)
....|.+.+.+++++.+.++++-||.-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123577889999999999999999999988876
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.78 E-value=7.1e-08 Score=91.51 Aligned_cols=155 Identities=19% Similarity=0.234 Sum_probs=95.6
Q ss_pred ceEEEecCCCCHHHHH-HHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccccccc----
Q 017614 54 PIKICGDIHGQYSDLL-RLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNR---- 128 (368)
Q Consensus 54 pi~VvGDIHG~~~dL~-~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~---- 128 (368)
++.++|||||++.... +.++.. ..+.++++||+++ .+.+++..+..+ +..++.++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 5899999999987643 344433 2367889999986 456766665443 345899999999654320
Q ss_pred ----------------cc----------------C--------C-hHHHHHHhc-hHHHHHHHHHhccCCcEEEEcccEE
Q 017614 129 ----------------VY----------------G--------F-YDECKRRFN-VRLWKIFTDCFNCLPVAALIDEKIL 166 (368)
Q Consensus 129 ----------------~~----------------g--------f-~~e~~~~~~-~~l~~~~~~~f~~LPlaaii~~~il 166 (368)
.+ + + ..+++..|+ ....+.+...++.++.+......|+
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 1 225666664 4566777788888864444445799
Q ss_pred EecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCC----CceEEe
Q 017614 167 CMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD----LELICR 242 (368)
Q Consensus 167 ~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~----l~~IIR 242 (368)
+.|++++.... +.+ +|. ...|.+. +..+|...+.+-+++.. .++++-
T Consensus 152 iaH~~~~G~g~---~~~--------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGS---DAE--------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCc---ccc--------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 99999874321 111 111 1223332 12366666666555543 799999
Q ss_pred eeccc
Q 017614 243 AHQVV 247 (368)
Q Consensus 243 gHq~v 247 (368)
||---
T Consensus 203 GH~H~ 207 (238)
T cd07397 203 GHMHH 207 (238)
T ss_pred CCccC
Confidence 98654
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.76 E-value=8.7e-08 Score=78.58 Aligned_cols=117 Identities=26% Similarity=0.381 Sum_probs=85.5
Q ss_pred EEEecCCCCHHHHHHHH--HhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCCh
Q 017614 56 KICGDIHGQYSDLLRLF--EYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll--~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~ 133 (368)
+++||+|+......... ........+.+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47899999999888765 33333455778899999999998888765533444456778999999999
Q ss_pred HHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcc
Q 017614 134 DECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWE 213 (368)
Q Consensus 134 ~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~ 213 (368)
++++|+++.+.........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~~------------------------------ 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPDE------------------------------ 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcccc------------------------------
Confidence 8999998865321110000
Q ss_pred cCCCCceeecChHHHHHHHHhCCCceEEeeecccccceE
Q 017614 214 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (368)
Q Consensus 214 ~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~ 252 (368)
......+...+...+.+.++-||.-....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0056778888999999999999998766554
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.74 E-value=7e-07 Score=84.08 Aligned_cols=71 Identities=10% Similarity=0.169 Sum_probs=56.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
+++.+++|+||++..+.++++.......+.+|.+||++++|+..-++..++-.+. ..+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987644456789999999999976666666665553 2334699999999975
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.46 E-value=1.6e-05 Score=72.12 Aligned_cols=152 Identities=16% Similarity=0.208 Sum_probs=90.5
Q ss_pred ceEEEecCC-CCHH-----HHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccc
Q 017614 54 PIKICGDIH-GQYS-----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVN 127 (368)
Q Consensus 54 pi~VvGDIH-G~~~-----dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~ 127 (368)
.|.|+||.| |+-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 378999999 5533 35556554 34567899999987 77777665542 25999999999631
Q ss_pred cccCChHHHHHHhchHHHHHHHHHhccCCcEEEEc---ccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcC
Q 017614 128 RVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID---EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSD 204 (368)
Q Consensus 128 ~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsD 204 (368)
.+|....++ .+++++||-.-.
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~------------------------------ 90 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV------------------------------ 90 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC------------------------------
Confidence 355554443 389999994210
Q ss_pred CCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCC-CCC-CCCC--eEEEEE
Q 017614 205 PSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPN-YCG-EFDN--AGAMMS 280 (368)
Q Consensus 205 P~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~n-Y~~-~~~N--~ga~l~ 280 (368)
|. ...+.+.++.++.+.+.+|-||+-.+.- +...+..++.-=|+.. +.+ ...+ .-|++.
T Consensus 91 ~~----------------~~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv~~~~~~~~~~~~~syail~ 153 (178)
T cd07394 91 PW----------------GDPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSATGAFSPLDPNVIPSFVLMD 153 (178)
T ss_pred CC----------------CCHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCCCCCCCCCCCCCCCeEEEEE
Confidence 00 0233456667788899999999987633 2223333333333321 111 1122 345555
Q ss_pred EcCCCceEEEEEc
Q 017614 281 VDETLMCSFQILK 293 (368)
Q Consensus 281 i~~~~~~~~~~~~ 293 (368)
++++ .+.++++.
T Consensus 154 ~~~~-~~~~~~~~ 165 (178)
T cd07394 154 IQGS-KVVTYVYQ 165 (178)
T ss_pred ecCC-eEEEEEEE
Confidence 5544 35556655
No 43
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.36 E-value=2.8e-06 Score=75.09 Aligned_cols=67 Identities=25% Similarity=0.249 Sum_probs=47.2
Q ss_pred eEEEecCCCCHHHHHHHHH-hCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 55 IKICGDIHGQYSDLLRLFE-YGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 55 i~VvGDIHG~~~dL~~ll~-~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
+.++||+|++.......+. .......+.++++||+++++..+..+. ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 4689999999887766552 233344567888999999987665543 221 223456799999999975
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.34 E-value=5.6e-06 Score=78.14 Aligned_cols=207 Identities=17% Similarity=0.229 Sum_probs=104.8
Q ss_pred CceEEEecCCCC------HHHHHHHHHhCCCCCCceEEEeccccCC--C-----CCcHHHHHHHHHhhhhCCCcEEEEcc
Q 017614 53 APIKICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRG 119 (368)
Q Consensus 53 ~pi~VvGDIHG~------~~dL~~ll~~~g~~~~~~~vFLGDyVDR--G-----~~slEvl~lL~~Lki~~P~~v~lLRG 119 (368)
|++.+++|+|.. ...+.+.++... ...+.++++||++|. | +...+++.+|..++ ..+-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~-~~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALS-DSGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHH-HcCCeEEEEeC
Confidence 578999999954 234555554321 234678889999985 2 23456666666664 23357999999
Q ss_pred cccccccccccCChHHHHHHhchHHHHHHHHHhccCC--cEEEEc-ccEEEecCCCCCCCC-ChhhhccCCC-CCCCCCc
Q 017614 120 NHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP--VAALID-EKILCMHGGLSPDLH-NLNQIRSLPR-PTDVPES 194 (368)
Q Consensus 120 NHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LP--laaii~-~~il~vHGGisp~~~-~l~~I~~i~R-p~~~~~~ 194 (368)
|||..... ...+..+. ..+| ....++ .+++++||-..+.-. .....+.+-| |.
T Consensus 79 NHD~~~~~-------~~~~~~g~----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~----- 136 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPW----- 136 (241)
T ss_pred CCchhhhH-------HHHHhCCC----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHH-----
Confidence 99964211 11111111 2222 222333 469999997654211 1111222211 10
Q ss_pred hhHHHhhhcCCCCC----CCCcc-----cCC-CCc-eeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEe
Q 017614 195 GLLCDLLWSDPSND----IKGWE-----AND-RGV-SYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIF 263 (368)
Q Consensus 195 ~~~~dlLWsDP~~~----~~~~~-----~n~-rG~-~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIF 263 (368)
+..-+.. -|... ...+. .+. +.. -....++++.+.+++.+.+.+|-||.-.+.=.....++.-++-.
T Consensus 137 -~~~~~~~-~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~ 214 (241)
T PRK05340 137 -LQWLFLA-LPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRI 214 (241)
T ss_pred -HHHHHHh-CCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEE
Confidence 0011110 01000 00000 000 111 12235577889999999999999999775433332333112223
Q ss_pred cCCCCCCCCCCeEEEEEEcCCCceEEE
Q 017614 264 SAPNYCGEFDNAGAMMSVDETLMCSFQ 290 (368)
Q Consensus 264 Sa~nY~~~~~N~ga~l~i~~~~~~~~~ 290 (368)
+-++. ...+.++.++++. .+++
T Consensus 215 ~lgdw----~~~~~~~~~~~~~-~~~~ 236 (241)
T PRK05340 215 VLGDW----HEQGSVLKVDADG-VELI 236 (241)
T ss_pred EeCCC----CCCCeEEEEECCc-eEEE
Confidence 33332 1236788888763 4443
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.26 E-value=1.2e-05 Score=69.12 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=74.0
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHH
Q 017614 56 KICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 135 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e 135 (368)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998877777665 34567899999973 3455555544 1234899999999
Q ss_pred HHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcccC
Q 017614 136 CKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEAN 215 (368)
Q Consensus 136 ~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n 215 (368)
-+++++|+-+.+. ... .+
T Consensus 57 ---------------------------~~Ilv~H~pp~~~-~~~------------------~~---------------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGI-GDG------------------ED---------------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcC-cCc------------------cc----------------
Confidence 3799999843210 000 00
Q ss_pred CCCceeecChHHHHHHHHhCCCceEEeeecccccceE
Q 017614 216 DRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (368)
Q Consensus 216 ~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~ 252 (368)
...-|.+++.+++++.+.++++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011356778889999999999999998776665
No 46
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.13 E-value=0.00017 Score=67.09 Aligned_cols=194 Identities=15% Similarity=0.131 Sum_probs=97.3
Q ss_pred ceEEEecCCCCH----HHH----HHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhh--CCCcEEEEcccccc
Q 017614 54 PIKICGDIHGQY----SDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK--YPENFFLLRGNHEC 123 (368)
Q Consensus 54 pi~VvGDIHG~~----~dL----~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~--~P~~v~lLRGNHE~ 123 (368)
+++++||+|--. ..+ ..+.+...-...+-+|++||++|.|....+--.+.-.++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 478999999522 222 23333332233466889999999998433221222222221 23458899999993
Q ss_pred cccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhc
Q 017614 124 ASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWS 203 (368)
Q Consensus 124 ~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWs 203 (368)
.. ...+. ...+-++.+.+.++.-|- ..-++++|-=+.+.-...+ ...|+
T Consensus 82 ~~-~ld~~--------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~~------------------~~~~~ 130 (214)
T cd07399 82 VL-ALEFG--------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRPD------------------SIDYD 130 (214)
T ss_pred hh-hCCCC--------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcCc------------------ccccc
Confidence 21 11111 123334445555554331 1247788874432110000 00010
Q ss_pred CCCCCCCCcccCCCCceeecChHHHHHHHHhC-CCceEEeeecccccceEEe-----cCceEEEEecCCCCCCCCCCeE-
Q 017614 204 DPSNDIKGWEANDRGVSYVFGADRVTEFLQKH-DLELICRAHQVVEDGYEFF-----ANRRLITIFSAPNYCGEFDNAG- 276 (368)
Q Consensus 204 DP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n-~l~~IIRgHq~v~~G~~~~-----~~~~viTIFSa~nY~~~~~N~g- 276 (368)
+ ...-+.+.+.+.++++ ++++++-||.-.. +.... .++.+..+.+........+|..
T Consensus 131 ~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~ 194 (214)
T cd07399 131 S---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFL 194 (214)
T ss_pred c---------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceE
Confidence 0 0123555688889888 7999999997642 33322 1334555544321111112211
Q ss_pred EEEEEcCC-CceEEEEEcc
Q 017614 277 AMMSVDET-LMCSFQILKP 294 (368)
Q Consensus 277 a~l~i~~~-~~~~~~~~~p 294 (368)
.++.++++ ..+.+..+.|
T Consensus 195 r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 195 RLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEecCCCEEEEEeCCC
Confidence 45666666 3566666654
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.13 E-value=5.1e-05 Score=65.20 Aligned_cols=118 Identities=22% Similarity=0.234 Sum_probs=72.7
Q ss_pred eEEEecCCCCHH------H----HHHHHHhCCCCCCceEEEeccccCCCCCc-H-HHHHHHHHhhhhCCCcEEEEccccc
Q 017614 55 IKICGDIHGQYS------D----LLRLFEYGGLPPRSNYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHE 122 (368)
Q Consensus 55 i~VvGDIHG~~~------d----L~~ll~~~g~~~~~~~vFLGDyVDRG~~s-l-Evl~lL~~Lki~~P~~v~lLRGNHE 122 (368)
++.++|+|=... . |.++++.......+.++++||+++.|..+ . +...++-.++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 12234443334457788999999998742 1 2222333332111 37999999999
Q ss_pred ccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhh
Q 017614 123 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLW 202 (368)
Q Consensus 123 ~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLW 202 (368)
. ++++|..+.+.-..
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 7 88899866532100
Q ss_pred cCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEE
Q 017614 203 SDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEF 253 (368)
Q Consensus 203 sDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~ 253 (368)
+.... . +.+.+.+.+++.++++++-||.-.+..+.+
T Consensus 95 ---------~~~~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 ---------GRERL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ---------ccccC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 00000 0 566788999999999999999988665543
No 48
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.13 E-value=5.6e-06 Score=73.60 Aligned_cols=65 Identities=23% Similarity=0.247 Sum_probs=45.6
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCc-HHHHHHHHHhhhhCCCcEEEEcccccccc
Q 017614 55 IKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 125 (368)
Q Consensus 55 i~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~s-lEvl~lL~~Lki~~P~~v~lLRGNHE~~~ 125 (368)
|.++||+||++..+.. ......+.+.+|+.||++++|..+ .+.+..+. ..+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 222233456788999999999763 33332222 23456999999999743
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.07 E-value=2.1e-05 Score=73.77 Aligned_cols=203 Identities=14% Similarity=0.162 Sum_probs=100.1
Q ss_pred eEEEecCCCCH------HHHHHHHHhCCCCCCceEEEeccccCCC--C---C--cHHHHHHHHHhhhhCCCcEEEEcccc
Q 017614 55 IKICGDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRG--K---Q--SLETICLLLAYKIKYPENFFLLRGNH 121 (368)
Q Consensus 55 i~VvGDIHG~~------~dL~~ll~~~g~~~~~~~vFLGDyVDRG--~---~--slEvl~lL~~Lki~~P~~v~lLRGNH 121 (368)
+++++|+|... ..+.+.+..... ..+.++++||++|.. . . ..++...+..|+. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234555544321 456788899999952 1 1 1244555555542 345799999999
Q ss_pred cccccccccCChHHHHHHhchHHHHHHHHHhccCCcE--EEE-cccEEEecCCCCCC-CCChhhhccC-CCCC------C
Q 017614 122 ECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVA--ALI-DEKILCMHGGLSPD-LHNLNQIRSL-PRPT------D 190 (368)
Q Consensus 122 E~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPla--aii-~~~il~vHGGisp~-~~~l~~I~~i-~Rp~------~ 190 (368)
|...-. ...+..+ ...+|-. ..+ +.+++++||-.-.. -....-.+.+ ..|. -
T Consensus 79 D~~~~~-------~~~~~~g----------i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 141 (231)
T TIGR01854 79 DFLIGK-------RFAREAG----------MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLH 141 (231)
T ss_pred chhhhH-------HHHHHCC----------CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHh
Confidence 964210 0001111 1122222 222 45899999965421 0111111111 1111 0
Q ss_pred CCC--chhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCC
Q 017614 191 VPE--SGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNY 268 (368)
Q Consensus 191 ~~~--~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY 268 (368)
.|. ...+...+++..... . ....-.-....++.+++.++..+.+++|-||.-.+.-+.+..++.-++-.+-++.
T Consensus 142 l~~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW 217 (231)
T TIGR01854 142 LPLAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW 217 (231)
T ss_pred CCHHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence 010 112223333322110 0 0000011233567788999999999999999977654443333322344444444
Q ss_pred CCCCCCeEEEEEEcCC
Q 017614 269 CGEFDNAGAMMSVDET 284 (368)
Q Consensus 269 ~~~~~N~ga~l~i~~~ 284 (368)
. ..+.++.++++
T Consensus 218 ~----~~~~~~~~~~~ 229 (231)
T TIGR01854 218 Y----RQGSILRVDAD 229 (231)
T ss_pred c----cCCeEEEEcCC
Confidence 2 23566777765
No 50
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.95 E-value=1.4e-05 Score=73.53 Aligned_cols=71 Identities=28% Similarity=0.246 Sum_probs=50.6
Q ss_pred CceEEEecCCCCHH----HHHHHHHhCCCCCCceEEEeccccCCCCCcH-HHHHHHHHhhhhCCCcEEEEcccccccc
Q 017614 53 APIKICGDIHGQYS----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 125 (368)
Q Consensus 53 ~pi~VvGDIHG~~~----dL~~ll~~~g~~~~~~~vFLGDyVDRG~~sl-Evl~lL~~Lki~~P~~v~lLRGNHE~~~ 125 (368)
+++.+++|+|+... .+.++++.......+.+++.||++|.+..+. ++..++..+ ..+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 57899999998643 5666666554444567888999999988765 444444333 24456999999999753
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.90 E-value=0.00067 Score=61.52 Aligned_cols=160 Identities=16% Similarity=0.154 Sum_probs=96.7
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCC
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 132 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf 132 (368)
+++.|++|.||...+..+..+.......+.+|.+||++..+... ++.-....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH--------HhhcccccceEEEEccCCCcccc-----
Confidence 67999999999997666666665555667788899999765421 11100246899999999986433
Q ss_pred hHHHHHHhchHHHHHHHHHhccCCcEEE--Ec-ccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCC
Q 017614 133 YDECKRRFNVRLWKIFTDCFNCLPVAAL--ID-EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDI 209 (368)
Q Consensus 133 ~~e~~~~~~~~l~~~~~~~f~~LPlaai--i~-~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~ 209 (368)
..+|-..+ ++ -+++++||.... .
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~--------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF-V--------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-c---------------------------------
Confidence 22333323 33 489999996642 0
Q ss_pred CCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCC-CceE
Q 017614 210 KGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET-LMCS 288 (368)
Q Consensus 210 ~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~-~~~~ 288 (368)
......++.+-+..+.+.+|.||+-.+.=.+. .+-.++-==|.+.+-+ ++..+++.++.+ .++.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~-~~i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV-GGILLVNPGSVSGPRG--GNPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE-CCEEEEcCCCcCCCCC--CCCcEEEEEEcCCCEEE
Confidence 01234567777888899999999987543322 2211111123444322 344445555443 4555
Q ss_pred EEEEcc
Q 017614 289 FQILKP 294 (368)
Q Consensus 289 ~~~~~p 294 (368)
...+..
T Consensus 160 ~~~~~~ 165 (172)
T COG0622 160 VLFLER 165 (172)
T ss_pred EEEeec
Confidence 555543
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.90 E-value=2.6e-05 Score=75.06 Aligned_cols=70 Identities=21% Similarity=0.096 Sum_probs=49.0
Q ss_pred CceEEEecCCCC----HHHHHHHHHhCCCCCCceEEEeccccCCC-C-CcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQ----YSDLLRLFEYGGLPPRSNYLFLGDYVDRG-K-QSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~----~~dL~~ll~~~g~~~~~~~vFLGDyVDRG-~-~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
.++.+++|+|.. ...+.++++...-...+-++++||++|++ + ..-++...|..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55567777665444456788899999954 2 223455556556543 3499999999964
No 53
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.77 E-value=1.9e-06 Score=87.93 Aligned_cols=240 Identities=13% Similarity=0.012 Sum_probs=162.3
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCCCCC-ceEEEeccccCCCCCcHH
Q 017614 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLE 98 (368)
Q Consensus 24 ~~l~~~~i~~L~~~a~~il~~ep~ll~l~~----pi~VvGDIHG~~~dL~~ll~~~g~~~~-~~~vFLGDyVDRG~~slE 98 (368)
..|...++..+++.+.+++..+|+.....+ -.+.++|.||++.|+.++++.- |.. .-|++-|++++++.+..+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 357788899999999999999998887743 4789999999999999998864 433 349999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhc---hHHHHHHHHHhccCCcEEEEcccEEEecCCCCC-
Q 017614 99 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN---VRLWKIFTDCFNCLPVAALIDEKILCMHGGLSP- 174 (368)
Q Consensus 99 vl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~---~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp- 174 (368)
.+..+...+...|+...+.|++||+..+...++|..+..-.++ ..+...+...+.. |+++...+.++=-| -+.-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~le~~-kvt~e 168 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVLEDH-KVTLE 168 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcccccc-hhhHH
Confidence 9999999999999999999999999999888888777665553 1222222221111 14434332222221 1110
Q ss_pred -------------CCC-----C-hhhh----ccCCCCCCCCCchhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHH
Q 017614 175 -------------DLH-----N-LNQI----RSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEF 231 (368)
Q Consensus 175 -------------~~~-----~-l~~I----~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~f 231 (368)
.+. + +++. +.+..+.+.. .-.|..||++......+-...++.+...++.....|
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 000 0 1111 1111111111 335678888875544455556777777888889999
Q ss_pred HHhCCCceEEeeeccc-----------c-cceEEec---CceEEEEecCCCCCC
Q 017614 232 LQKHDLELICRAHQVV-----------E-DGYEFFA---NRRLITIFSAPNYCG 270 (368)
Q Consensus 232 l~~n~l~~IIRgHq~v-----------~-~G~~~~~---~~~viTIFSa~nY~~ 270 (368)
+.+.++.-+.+.|.-+ + .+|...+ .+.++++|+++.+|.
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 9999998888888642 1 2222211 235889999998874
No 54
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.69 E-value=8.2e-05 Score=70.00 Aligned_cols=68 Identities=22% Similarity=0.171 Sum_probs=47.7
Q ss_pred ceEEEecCCCCH------HHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 54 PIKICGDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 54 pi~VvGDIHG~~------~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
++.+++|+|+++ ..+.++++.+.-...+-+|+.||++++++.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 22455655544344567889999999876666665555442 345699999999975
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.66 E-value=0.0014 Score=62.25 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=42.4
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHhCCC--CCCceEEEeccccCCCCCcH---HHHHHHHH-hhh-hC
Q 017614 54 PIKICGDIHGQY----------------SDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL---ETICLLLA-YKI-KY 110 (368)
Q Consensus 54 pi~VvGDIHG~~----------------~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~sl---Evl~lL~~-Lki-~~ 110 (368)
.++++||+|-.. ..|.++++.+.. +..+-++++||+++.|...- +....+.. ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467889988553 134555555432 23456788999999987541 11111111 221 12
Q ss_pred CCcEEEEccccccc
Q 017614 111 PENFFLLRGNHECA 124 (368)
Q Consensus 111 P~~v~lLRGNHE~~ 124 (368)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 56
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.65 E-value=0.00016 Score=64.80 Aligned_cols=56 Identities=18% Similarity=0.123 Sum_probs=32.8
Q ss_pred HHHHHhCCCCCCceEEEeccccCCCCCcH-HHHHHH-HHhhhhCCCcEEEEccccccc
Q 017614 69 LRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 69 ~~ll~~~g~~~~~~~vFLGDyVDRG~~sl-Evl~lL-~~Lki~~P~~v~lLRGNHE~~ 124 (368)
.++.+.......+.+|++||++|....+. +....+ +......+-.+++++||||..
T Consensus 31 ~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 31 ERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 33443333334578999999998755332 211111 111223456799999999975
No 57
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.62 E-value=0.0032 Score=57.43 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=43.6
Q ss_pred CceEEEecCCCCHH-----------HHHHHHH-hCCCCCCceEEEeccccCCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q 017614 53 APIKICGDIHGQYS-----------DLLRLFE-YGGLPPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLL 117 (368)
Q Consensus 53 ~pi~VvGDIHG~~~-----------dL~~ll~-~~g~~~~~~~vFLGDyVDRG~~s---lEvl~lL~~Lki~~P~~v~lL 117 (368)
.++.+++|+|-... ...+.++ .......+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999995221 1112222 22223446789999999977753 555555544333344568999
Q ss_pred ccccc
Q 017614 118 RGNHE 122 (368)
Q Consensus 118 RGNHE 122 (368)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.51 E-value=0.00027 Score=67.73 Aligned_cols=73 Identities=21% Similarity=0.186 Sum_probs=47.3
Q ss_pred ceEEEecCC-CC------------HHHHHHHHHhCCCCCCceEEEeccccCCCCC-cHHHHHHHHHhhhhCCCcEEEEcc
Q 017614 54 PIKICGDIH-GQ------------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 119 (368)
Q Consensus 54 pi~VvGDIH-G~------------~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~-slEvl~lL~~Lki~~P~~v~lLRG 119 (368)
++.+++|+| +. ...+.++++.+.....+-+|++||+++.|.. +.+-+..+...--..+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 22 4556666666543345678899999999873 223333333322223446999999
Q ss_pred ccccccc
Q 017614 120 NHECASV 126 (368)
Q Consensus 120 NHE~~~i 126 (368)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.47 E-value=0.00022 Score=71.04 Aligned_cols=72 Identities=24% Similarity=0.367 Sum_probs=48.1
Q ss_pred CceEEEecCC-C-----------CHHHHHHHHHhCCCCCCceEEEeccccCCC-CCcHHHHHHHHH--hhh--hCCCcEE
Q 017614 53 APIKICGDIH-G-----------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRG-KQSLETICLLLA--YKI--KYPENFF 115 (368)
Q Consensus 53 ~pi~VvGDIH-G-----------~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG-~~slEvl~lL~~--Lki--~~P~~v~ 115 (368)
|+++.++|+| | +...|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++. ..+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 4 234455555555444557788999999985 455555444433 211 2345799
Q ss_pred EEccccccc
Q 017614 116 LLRGNHECA 124 (368)
Q Consensus 116 lLRGNHE~~ 124 (368)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 60
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.42 E-value=0.00045 Score=61.69 Aligned_cols=43 Identities=30% Similarity=0.461 Sum_probs=31.3
Q ss_pred CCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 126 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i 126 (368)
+.+.++++||++++|..+.. +..+.. .+..+++++||||....
T Consensus 42 ~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 42 PDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEEeCCCCchhh
Confidence 45789999999999986644 333333 34569999999997543
No 61
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.35 E-value=0.00066 Score=63.09 Aligned_cols=69 Identities=25% Similarity=0.296 Sum_probs=44.5
Q ss_pred ceEEEecCCCC------------HHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcc
Q 017614 54 PIKICGDIHGQ------------YSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 119 (368)
Q Consensus 54 pi~VvGDIHG~------------~~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRG 119 (368)
++++++|+|=. ...+.++++.+.- +..+-+|++||+++.|.. +....+....-..+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 47899999943 3456677765433 245678899999998753 2222222221223556999999
Q ss_pred ccccc
Q 017614 120 NHECA 124 (368)
Q Consensus 120 NHE~~ 124 (368)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 62
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.35 E-value=0.00046 Score=66.55 Aligned_cols=70 Identities=21% Similarity=0.317 Sum_probs=45.0
Q ss_pred eEEEecCCCCHHHHHHHHHh---CCCCCCceEEEeccccCCCC-CcHHHHH------HHH---Hh---hhhCCCcEEEEc
Q 017614 55 IKICGDIHGQYSDLLRLFEY---GGLPPRSNYLFLGDYVDRGK-QSLETIC------LLL---AY---KIKYPENFFLLR 118 (368)
Q Consensus 55 i~VvGDIHG~~~dL~~ll~~---~g~~~~~~~vFLGDyVDRG~-~slEvl~------lL~---~L---ki~~P~~v~lLR 118 (368)
|+|+||+||+++.+.+.++. -...+.+-+|++||+-..+. ...+.+. -+. .+ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999998765443 22345677889999965443 3333321 111 11 223566689999
Q ss_pred cccccc
Q 017614 119 GNHECA 124 (368)
Q Consensus 119 GNHE~~ 124 (368)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 63
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.29 E-value=0.00055 Score=65.40 Aligned_cols=72 Identities=24% Similarity=0.296 Sum_probs=47.4
Q ss_pred CceEEEecCC-CC-----------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHH----HHHHhhhhCCCcEEE
Q 017614 53 APIKICGDIH-GQ-----------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFL 116 (368)
Q Consensus 53 ~pi~VvGDIH-G~-----------~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~----lL~~Lki~~P~~v~l 116 (368)
|+++.++|+| |. ...|.++++.+.-...+.+++.||++|+...+.+... ++..|+-..|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 5789999999 32 2344555554433445678899999999876655433 333333222356999
Q ss_pred Eccccccc
Q 017614 117 LRGNHECA 124 (368)
Q Consensus 117 LRGNHE~~ 124 (368)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 64
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.27 E-value=0.00081 Score=70.57 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=58.8
Q ss_pred CceEEEecCC-CCH----HHHHHHHHhC-CC--------CCCceEEEeccccCC-CCCc---------------HHHHHH
Q 017614 53 APIKICGDIH-GQY----SDLLRLFEYG-GL--------PPRSNYLFLGDYVDR-GKQS---------------LETICL 102 (368)
Q Consensus 53 ~pi~VvGDIH-G~~----~dL~~ll~~~-g~--------~~~~~~vFLGDyVDR-G~~s---------------lEvl~l 102 (368)
..+++++|+| |.- ..+..+++.. |. ..-+.+|++||++|. |.+. -++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4689999999 652 2233333322 22 123578899999995 3211 123334
Q ss_pred HHHhhhhCCCcEEEEcccccccccccc-cCChHHHHHHhchHHHHHHHHHhccCCcEEEEcc-cEEEecCCC
Q 017614 103 LLAYKIKYPENFFLLRGNHECASVNRV-YGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGL 172 (368)
Q Consensus 103 L~~Lki~~P~~v~lLRGNHE~~~i~~~-~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGi 172 (368)
|..+. ..-.|++++||||....... -.+.......+.. .-..++.. |....+++ +++++||-.
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 43332 33469999999997543221 1222222111111 01223333 55444444 789999954
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.21 E-value=0.0008 Score=61.42 Aligned_cols=74 Identities=23% Similarity=0.259 Sum_probs=48.3
Q ss_pred ceEEEecCC-CCH--------------HHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhC---CCcEE
Q 017614 54 PIKICGDIH-GQY--------------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFF 115 (368)
Q Consensus 54 pi~VvGDIH-G~~--------------~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~---P~~v~ 115 (368)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 478899999 321 235566655444445678899999998876655444443332122 45699
Q ss_pred EEcccccccccc
Q 017614 116 LLRGNHECASVN 127 (368)
Q Consensus 116 lLRGNHE~~~i~ 127 (368)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999976543
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.16 E-value=0.0048 Score=54.71 Aligned_cols=47 Identities=26% Similarity=0.286 Sum_probs=29.1
Q ss_pred CCceEEEeccccCCCCCcH-HHH-HHHHHhhhh---C-CCcEEEEcccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQSL-ETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 125 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~sl-Evl-~lL~~Lki~---~-P~~v~lLRGNHE~~~ 125 (368)
..+.+|++||++|.+..+- +.. ..+..++.. . +-.++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3467899999999886432 221 222222211 1 346999999999753
No 67
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.15 E-value=0.0011 Score=63.78 Aligned_cols=71 Identities=15% Similarity=0.066 Sum_probs=46.6
Q ss_pred cCceEEEecCC-C-----------CHHHHHHHHHhCC-C-CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 017614 52 EAPIKICGDIH-G-----------QYSDLLRLFEYGG-L-PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 117 (368)
Q Consensus 52 ~~pi~VvGDIH-G-----------~~~dL~~ll~~~g-~-~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lL 117 (368)
+.+++.++|+| . ....|.++++.+. . +..+-+|+.||++|.|. .+-+..+...-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 35799999999 1 1456777776543 2 23456888999999874 333333333222345569999
Q ss_pred ccccccc
Q 017614 118 RGNHECA 124 (368)
Q Consensus 118 RGNHE~~ 124 (368)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 68
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.13 E-value=0.00098 Score=68.14 Aligned_cols=72 Identities=22% Similarity=0.302 Sum_probs=45.7
Q ss_pred CceEEEecCC-CC-H------HH----HHHHHHhCCCCCCceEEEeccccCCCCCcHHHHH----HHHHhhhhCCCcEEE
Q 017614 53 APIKICGDIH-GQ-Y------SD----LLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFL 116 (368)
Q Consensus 53 ~pi~VvGDIH-G~-~------~d----L~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~----lL~~Lki~~P~~v~l 116 (368)
++++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+... ++..|+ ..+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~-~~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQ-QTGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHH-hcCCcEEE
Confidence 5788999999 42 1 11 2334444333456778899999999876654332 233333 22346999
Q ss_pred Ecccccccc
Q 017614 117 LRGNHECAS 125 (368)
Q Consensus 117 LRGNHE~~~ 125 (368)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.94 E-value=0.0025 Score=60.05 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=43.0
Q ss_pred CceEEEecCC-CCHHH----------------HHHHHHhCCCCCCceEEEeccccCCCCCc---HHHHHHHHHhhhhCCC
Q 017614 53 APIKICGDIH-GQYSD----------------LLRLFEYGGLPPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 112 (368)
Q Consensus 53 ~pi~VvGDIH-G~~~d----------------L~~ll~~~g~~~~~~~vFLGDyVDRG~~s---lEvl~lL~~Lki~~P~ 112 (368)
.+..||+|+| |--.. |.++.+.......+.+|++||+++..... .++..++-.+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5689999999 54222 23333333333457899999999765543 2222333222 24
Q ss_pred cEEEEcccccccc
Q 017614 113 NFFLLRGNHECAS 125 (368)
Q Consensus 113 ~v~lLRGNHE~~~ 125 (368)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 70
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.88 E-value=0.0029 Score=64.65 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=55.7
Q ss_pred CceEEEecCCCC------------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhh-----------
Q 017614 53 APIKICGDIHGQ------------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK----------- 109 (368)
Q Consensus 53 ~pi~VvGDIHG~------------~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~----------- 109 (368)
+++.+++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 679999999932 557788887776556677888999999999999988665544221
Q ss_pred -------------------------CCCcEEEEcccccccc
Q 017614 110 -------------------------YPENFFLLRGNHECAS 125 (368)
Q Consensus 110 -------------------------~P~~v~lLRGNHE~~~ 125 (368)
..-.|+++-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999864
No 71
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.85 E-value=0.0045 Score=58.40 Aligned_cols=73 Identities=22% Similarity=0.248 Sum_probs=51.2
Q ss_pred CceEEEecCCCC------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHh--hhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAY--KIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~------~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~L--ki~~P~~v~lLRGNHE~~ 124 (368)
++++.|+|+|-- ...+.++++.....+.+-+|+.||+.+.|. .+-...+..+ +...|..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 368899999966 334556667766555688999999999963 2222233222 236788899999999987
Q ss_pred ccc
Q 017614 125 SVN 127 (368)
Q Consensus 125 ~i~ 127 (368)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 72
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.82 E-value=0.18 Score=47.66 Aligned_cols=205 Identities=18% Similarity=0.191 Sum_probs=114.9
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecccc--CCCCCcHHHHHH-HHHhhhhCCCcEEEEccccccccccc
Q 017614 52 EAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASVNR 128 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyV--DRG~~slEvl~l-L~~Lki~~P~~v~lLRGNHE~~~i~~ 128 (368)
.+++..+.|+||.++.+.++++.......+-+++.||+. +.|+.-.-.-.. +-.++ .....++.+.||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 478999999999999999999988766667788899999 888743222110 22332 34567999999988764421
Q ss_pred ccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCC-C-----ChhhhccCCCCC-CCCCchhHHHhh
Q 017614 129 VYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL-H-----NLNQIRSLPRPT-DVPESGLLCDLL 201 (368)
Q Consensus 129 ~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~-~-----~l~~I~~i~Rp~-~~~~~~~~~dlL 201 (368)
.....+..+. +-..-+++-.+|-=||..|.. . +.++|....+.. +...+ ...=++
T Consensus 82 -------~l~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~~~Il~ 143 (226)
T COG2129 82 -------VLKNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-PVNILL 143 (226)
T ss_pred -------HHHhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC-cceEEE
Confidence 1111221111 122233433455557776542 1 123332211100 00000 000000
Q ss_pred hcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEE
Q 017614 202 WSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSV 281 (368)
Q Consensus 202 WsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i 281 (368)
---|.-.. ...++-| -..-|..+++++.++.+-.+.+.||=--..|.+.-.+ ||+-.|.=.+ .-..|++.+
T Consensus 144 ~HaPP~gt--~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 144 THAPPYGT--LLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred ecCCCCCc--cccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 00111100 0001122 1345899999999999999999999776778765433 4555554322 346788888
Q ss_pred cCC
Q 017614 282 DET 284 (368)
Q Consensus 282 ~~~ 284 (368)
+++
T Consensus 215 ~~~ 217 (226)
T COG2129 215 EKE 217 (226)
T ss_pred cCc
Confidence 877
No 73
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=96.82 E-value=0.002 Score=58.87 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=22.3
Q ss_pred ChHHHHHHHHhCCCceEEeeecccccceE
Q 017614 224 GADRVTEFLQKHDLELICRAHQVVEDGYE 252 (368)
Q Consensus 224 G~~~v~~fl~~n~l~~IIRgHq~v~~G~~ 252 (368)
.+..+.+.++..+.+.+|-||.-.+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45567777889999999999997754433
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.76 E-value=0.0033 Score=59.06 Aligned_cols=45 Identities=4% Similarity=-0.070 Sum_probs=30.9
Q ss_pred ChHHHHHHHHhCCCceEEeeecccccceE---EecCceEEEEecCCCCCC
Q 017614 224 GADRVTEFLQKHDLELICRAHQVVEDGYE---FFANRRLITIFSAPNYCG 270 (368)
Q Consensus 224 G~~~v~~fl~~n~l~~IIRgHq~v~~G~~---~~~~~~viTIFSa~nY~~ 270 (368)
+...+.+.+++.++++++-||.-...-.. ...++ |+.+++|+=|-
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~ 228 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYL 228 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhc
Confidence 55677888889999999999987543322 12344 67777776554
No 75
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.55 E-value=0.0059 Score=58.30 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=22.7
Q ss_pred HHHHHHhCCCceEEeeecccccceEEec
Q 017614 228 VTEFLQKHDLELICRAHQVVEDGYEFFA 255 (368)
Q Consensus 228 v~~fl~~n~l~~IIRgHq~v~~G~~~~~ 255 (368)
+.+.+++.++++++-||.-...+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7778899999999999998877745543
No 76
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.48 E-value=0.0064 Score=61.34 Aligned_cols=74 Identities=24% Similarity=0.266 Sum_probs=51.4
Q ss_pred CceEEEecCC-C------------CHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhhCC---CcEEE
Q 017614 53 APIKICGDIH-G------------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYP---ENFFL 116 (368)
Q Consensus 53 ~pi~VvGDIH-G------------~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P---~~v~l 116 (368)
+++..++|.| | .+.+|..+++.+.-...+-+|.-||+.|++.-|.+++..+...-.+.. =.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 5778889998 4 134444555554444456788899999999999888777655422222 35999
Q ss_pred Eccccccccc
Q 017614 117 LRGNHECASV 126 (368)
Q Consensus 117 LRGNHE~~~i 126 (368)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999997643
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.34 E-value=0.0095 Score=57.19 Aligned_cols=70 Identities=19% Similarity=0.186 Sum_probs=40.2
Q ss_pred CceEEEecCCC----CHHHHHHHHHhCCCCCCceEEEeccccCCCCCc----HHH-HHHHHHhhhhCCCcEEEEcccccc
Q 017614 53 APIKICGDIHG----QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS----LET-ICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 53 ~pi~VvGDIHG----~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~s----lEv-l~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
-+++|+||.|. +...+.++.+. ....+-+|++||+++-+... -+. ...+-.+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 36899999995 33333334333 23345678899999644332 121 12222222 22348999999997
Q ss_pred ccc
Q 017614 124 ASV 126 (368)
Q Consensus 124 ~~i 126 (368)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.25 E-value=0.023 Score=53.90 Aligned_cols=197 Identities=17% Similarity=0.247 Sum_probs=102.9
Q ss_pred EEecCCCC------HHHHHHHHHhCCCCCCceEEEeccccCC--CCC-----cHHHHHHHHHhhhhCCCcEEEEcccccc
Q 017614 57 ICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 57 VvGDIHG~------~~dL~~ll~~~g~~~~~~~vFLGDyVDR--G~~-----slEvl~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
.|+|+|=. -+.|.+.++... +..+.+.+|||++|- |.. -.+|...|..+ .+...+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 68999933 334455565533 245678889999972 332 23444444443 3567889999999994
Q ss_pred cccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEE---cccEEEecCCCCC-CCCChhhhc-----------cCCCC
Q 017614 124 ASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---DEKILCMHGGLSP-DLHNLNQIR-----------SLPRP 188 (368)
Q Consensus 124 ~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii---~~~il~vHGGisp-~~~~l~~I~-----------~i~Rp 188 (368)
. +.. +++ .-...+.-+|-..++ +.+++++||-.-- ....-...+ -+..|
T Consensus 80 l-l~~----------~f~-----~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 L-LGK----------RFA-----QEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred H-HHH----------HHH-----hhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 3 211 111 111113344554444 4689999995521 110000011 11111
Q ss_pred CCCCCchhHHHhhhcCCCCCCCCcccCCCCce---eecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 189 TDVPESGLLCDLLWSDPSNDIKGWEANDRGVS---YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 189 ~~~~~~~~~~dlLWsDP~~~~~~~~~n~rG~~---~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
+. - ..-+..-+|+.- .|........ ....+.++.+-++++|++.+|.||.-.+..-....-..|+
T Consensus 144 l~-~-R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~----- 211 (237)
T COG2908 144 LR-V-RRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN----- 211 (237)
T ss_pred HH-H-HHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe-----
Confidence 11 0 001112244443 1222211111 1245678888999999999999999876665443211111
Q ss_pred CCCCCCCCCeEEEEEEcCCCc
Q 017614 266 PNYCGEFDNAGAMMSVDETLM 286 (368)
Q Consensus 266 ~nY~~~~~N~ga~l~i~~~~~ 286 (368)
||.-...|++++++++..
T Consensus 212 ---lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ---LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ---cCcchhcceEEEEecCcE
Confidence 122225678999988754
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.09 E-value=0.017 Score=54.40 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=37.9
Q ss_pred EEEecCC--CCH---HHHHHHHHhC-CCC----CCceEEEeccccCCCC-----C-------cHH----HHHHHHHhhhh
Q 017614 56 KICGDIH--GQY---SDLLRLFEYG-GLP----PRSNYLFLGDYVDRGK-----Q-------SLE----TICLLLAYKIK 109 (368)
Q Consensus 56 ~VvGDIH--G~~---~dL~~ll~~~-g~~----~~~~~vFLGDyVDRG~-----~-------slE----vl~lL~~Lki~ 109 (368)
++++|+| +.. ..+..+++.. +.. .-+.+|++||++|+.. . ..+ +..++-.| .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~ 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDV--P 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhc--c
Confidence 6799999 331 2223333322 222 2367888999999831 0 011 22222222 2
Q ss_pred CCCcEEEEcccccccc
Q 017614 110 YPENFFLLRGNHECAS 125 (368)
Q Consensus 110 ~P~~v~lLRGNHE~~~ 125 (368)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 3456999999999753
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.07 E-value=0.014 Score=56.95 Aligned_cols=72 Identities=24% Similarity=0.276 Sum_probs=47.5
Q ss_pred CceEEEecCCCCHHH--HHHHHHhCCCCCCceEEEeccccCC-CCCcHHHHH-HHHHhhhhCCCcEEEEccccccccc
Q 017614 53 APIKICGDIHGQYSD--LLRLFEYGGLPPRSNYLFLGDYVDR-GKQSLETIC-LLLAYKIKYPENFFLLRGNHECASV 126 (368)
Q Consensus 53 ~pi~VvGDIHG~~~d--L~~ll~~~g~~~~~~~vFLGDyVDR-G~~slEvl~-lL~~Lki~~P~~v~lLRGNHE~~~i 126 (368)
-+++-++|+|-.... ..+.+........+-+++.|||+|+ .+.+.+.+. .|.. ++.|-.++.+-||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~--L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAK--LKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHh--hhccCCEEEEecccccccc
Confidence 358899999977554 2223333222223778889999996 665555444 4443 4577789999999986643
No 81
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=95.98 E-value=0.015 Score=51.55 Aligned_cols=119 Identities=19% Similarity=0.294 Sum_probs=79.8
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCCh
Q 017614 56 KICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~ 133 (368)
.|+||+||+++.+.+-++...- .+-+-++++||+..-...+ +-+.-++.=+...|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877765321 2446688899999766555 3333333445567888999999998
Q ss_pred HHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCCCCCcc
Q 017614 134 DECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWE 213 (368)
Q Consensus 134 ~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~ 213 (368)
+-.||++|.=+. .+...+++. .+.
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~~-------- 92 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKVP-------------------FEE-------- 92 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCCc-------------------ccc--------
Confidence 447999987432 111111110 000
Q ss_pred cCCCCceeecChHHHHHHHHhCCCceEEeeeccc
Q 017614 214 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 247 (368)
Q Consensus 214 ~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v 247 (368)
.+..-|...+.+++++..=.+.+-||..+
T Consensus 93 -----~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 93 -----TLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----cccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 11235788999999999999999999754
No 82
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.91 E-value=0.018 Score=51.89 Aligned_cols=47 Identities=23% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCceEEEeccccCCCCCcH--H---HHHHHHHhhh-hC----CCcEEEEcccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQSL--E---TICLLLAYKI-KY----PENFFLLRGNHECAS 125 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~sl--E---vl~lL~~Lki-~~----P~~v~lLRGNHE~~~ 125 (368)
..+.+|++||++|.|.... + .+..+..+.- .. +-.++.+.||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3467899999999987532 2 2222222211 11 346999999999864
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.86 E-value=0.15 Score=49.03 Aligned_cols=24 Identities=4% Similarity=-0.020 Sum_probs=21.2
Q ss_pred cChHHHHHHHHhCCCceEEeeecc
Q 017614 223 FGADRVTEFLQKHDLELICRAHQV 246 (368)
Q Consensus 223 FG~~~v~~fl~~n~l~~IIRgHq~ 246 (368)
-.++.+++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 477889999999999999999974
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.63 E-value=0.053 Score=50.22 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=31.8
Q ss_pred CCceEEEeccccCCCCCc--HHHHHHHHHhhhhCC----CcEEEEccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 124 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~s--lEvl~lL~~Lki~~P----~~v~lLRGNHE~~ 124 (368)
..+-++||||++|.|+.+ .|....+-.++-.++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 346788999999999964 235555544443222 4588999999965
No 85
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.24 E-value=0.11 Score=49.48 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=58.3
Q ss_pred cCceEEEecCCCCHHHH----------------HHHHH-hCCCCCCceEEEeccccCCCCC-----cHHHHHHHHHhhhh
Q 017614 52 EAPIKICGDIHGQYSDL----------------LRLFE-YGGLPPRSNYLFLGDYVDRGKQ-----SLETICLLLAYKIK 109 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~dL----------------~~ll~-~~g~~~~~~~vFLGDyVDRG~~-----slEvl~lL~~Lki~ 109 (368)
..+..|+.|+|=-+..- .+.++ ....-..+++|.+||+-.-.+. ..|+-.++-.++..
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 57899999999444332 22222 1112234679999999865443 24444444333322
Q ss_pred CCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCC
Q 017614 110 YPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSP 174 (368)
Q Consensus 110 ~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp 174 (368)
.+.+++||||...-.-..++.- +.++... .++++++||=--|
T Consensus 99 ---evi~i~GNHD~~i~~~~~~~~v------------------~v~~~~~--i~~~~~~HGh~~~ 140 (235)
T COG1407 99 ---EVIIIRGNHDNGIEEILPGFNV------------------EVVDELE--IGGLLFRHGHKEP 140 (235)
T ss_pred ---cEEEEeccCCCccccccccCCc------------------eeeeeEE--ecCEEEEeCCCCC
Confidence 4999999999875544433311 1223332 3489999995543
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.05 E-value=0.041 Score=51.69 Aligned_cols=66 Identities=27% Similarity=0.291 Sum_probs=41.8
Q ss_pred ceEEEecCCCCH---------HHHHHHHHhCCC-CCCceEEEeccccCCCCCcH-----HHHHHHHHhhhhCCCcEEEEc
Q 017614 54 PIKICGDIHGQY---------SDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 118 (368)
Q Consensus 54 pi~VvGDIHG~~---------~dL~~ll~~~g~-~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lki~~P~~v~lLR 118 (368)
+++.++|+||.+ ..+.++++...- .+++-++..||+++.++.+- .++..+-++ -. . ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g~-d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---GY-D-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---CC-C-EEee
Confidence 478899999887 455666655433 23445677899999887653 344444333 22 3 3445
Q ss_pred cccccc
Q 017614 119 GNHECA 124 (368)
Q Consensus 119 GNHE~~ 124 (368)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.87 E-value=0.14 Score=48.62 Aligned_cols=208 Identities=14% Similarity=0.177 Sum_probs=90.8
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHH-------------------------HHHHHHhh
Q 017614 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLET-------------------------ICLLLAYK 107 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEv-------------------------l~lL~~Lk 107 (368)
.+|..++|.||+++.+.++.+.+.-...+-++|+||++-....+-|- +.-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 46899999999999999998776555667899999998655444332 22222222
Q ss_pred hhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecC-----CCCCCCCChhhh
Q 017614 108 IKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHG-----GLSPDLHNLNQI 182 (368)
Q Consensus 108 i~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHG-----Gisp~~~~l~~I 182 (368)
-..+-.++.++||||....- | +...++.+ ---|-.-.+.+.++.--| |..-.++.-+..
T Consensus 86 ~~~~~p~~~vPG~~Dap~~~----~---lr~a~~~e---------~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPERF----F---LREAYNAE---------IVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HCC-SEEEEE--TTS-SHHH----H---HHHHHHCC---------CC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HhcCCcEEEecCCCCchHHH----H---HHHHhccc---------eeccceeeeeeeecccCCcEEEEecCccccCCCcc
Confidence 24555799999999985321 0 11111100 012333333333332222 222222111111
Q ss_pred ccCCCCCCCCCc--hhHHHhhhcC-CCCCCCCcccCC-CCce-eecChHHHHHHHHhCCCceEEeeecccccceEEecCc
Q 017614 183 RSLPRPTDVPES--GLLCDLLWSD-PSNDIKGWEAND-RGVS-YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 257 (368)
Q Consensus 183 ~~i~Rp~~~~~~--~~~~dlLWsD-P~~~~~~~~~n~-rG~~-~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~ 257 (368)
. ..++.-|.. .....++|-= +...+--+...| -+.+ ..=|+.++..|.++.+=.+++.||-....|-+.-.+.
T Consensus 150 ~--~~~LrYP~weaey~lk~l~elk~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~T 227 (255)
T PF14582_consen 150 E--EFKLRYPAWEAEYSLKFLRELKDYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHGKESLGKT 227 (255)
T ss_dssp C--SSS-EEEHHHHHHHHGGGGGCTSSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE--EEETTE
T ss_pred c--cccccchHHHHHHHHHHHHhcccccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcEEEecccccchhhHHhCCE
Confidence 1 111111211 1112333331 111111111111 2222 3458899999999999999999998776666655443
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEEcCC
Q 017614 258 RLITIFSAPNYCGEFDNAGAMMSVDET 284 (368)
Q Consensus 258 ~viTIFSa~nY~~~~~N~ga~l~i~~~ 284 (368)
.|| .-.+-+.| .-|++.+..+
T Consensus 228 lVV--NPGsL~~G----~yAvI~l~~~ 248 (255)
T PF14582_consen 228 LVV--NPGSLAEG----DYAVIDLEQD 248 (255)
T ss_dssp EEE--E--BGGGT----EEEEEETTTT
T ss_pred EEe--cCcccccC----ceeEEEeccc
Confidence 333 32222213 4566665443
No 88
>PLN02533 probable purple acid phosphatase
Probab=94.00 E-value=0.075 Score=54.75 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=39.1
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcH--HH-HHHHHHhhhhCCCcEEEEcccccccc
Q 017614 52 EAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL--ET-ICLLLAYKIKYPENFFLLRGNHECAS 125 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~sl--Ev-l~lL~~Lki~~P~~v~lLRGNHE~~~ 125 (368)
.-+++++||+|-. ......++.+.....+-++++||+++-+.+.- +. ..++-.+.... -++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 3468999999632 11122333332233456788999998654321 11 11222222223 3889999999764
No 89
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=93.64 E-value=0.15 Score=47.24 Aligned_cols=65 Identities=17% Similarity=0.181 Sum_probs=39.2
Q ss_pred cCCCCHHHHHHHHHhCCC-CCCceEEEeccccCCCCCcHH-HHHHHHHhhhhC---------------------CCcEEE
Q 017614 60 DIHGQYSDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQSLE-TICLLLAYKIKY---------------------PENFFL 116 (368)
Q Consensus 60 DIHG~~~dL~~ll~~~g~-~~~~~~vFLGDyVDRG~~slE-vl~lL~~Lki~~---------------------P~~v~l 116 (368)
|++|+=.-|.++++.+-. -..+.++||||++|.|--+=+ --...-.++-.+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556665566777765433 234668899999999853322 222233332222 135789
Q ss_pred Eccccccc
Q 017614 117 LRGNHECA 124 (368)
Q Consensus 117 LRGNHE~~ 124 (368)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999974
No 90
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.22 E-value=1.2 Score=46.38 Aligned_cols=207 Identities=18% Similarity=0.191 Sum_probs=104.1
Q ss_pred ceEEEecCC-CCHHHHHH----HHHhCCC----CCCceEE-EeccccCCC-C-----------CcHHHHHHHHHhhhhCC
Q 017614 54 PIKICGDIH-GQYSDLLR----LFEYGGL----PPRSNYL-FLGDYVDRG-K-----------QSLETICLLLAYKIKYP 111 (368)
Q Consensus 54 pi~VvGDIH-G~~~dL~~----ll~~~g~----~~~~~~v-FLGDyVDRG-~-----------~slEvl~lL~~Lki~~P 111 (368)
.+..++|+| |.-.-+.. .++-++- .+..+|+ .-||.||.. - +..|-...+-.+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 478999999 44333332 2232222 2334565 568999942 1 12223333333333345
Q ss_pred Cc--EEEEccccccccccccc-CChHHHHHHhchHHHHHHHHHhccCCcEEEEcc-cEEEecCCCCCCCCChhhhccCCC
Q 017614 112 EN--FFLLRGNHECASVNRVY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPR 187 (368)
Q Consensus 112 ~~--v~lLRGNHE~~~i~~~~-gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGisp~~~~l~~I~~i~R 187 (368)
.+ |++.+||||.......- .+.......+ ...+-.|=.=|...-+++ .++..|| .++++|...-.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf-----~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSLF-----SLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhcccc-----cccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCC
Confidence 44 88899999976544322 3333332222 222211222344444444 6888888 46777654422
Q ss_pred CCCCCC--chhHHHhhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 188 PTDVPE--SGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 188 p~~~~~--~~~~~dlLWsDP~~~~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
..+..+ .-+.+-|.|.-=.+...+-.+ ..-|.+ +-|.=.---++++.||+.. .|+....+.++|..+|-
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~k---D~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~ 446 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETK---DYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTW 446 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCccc-----cccCCc---CceeeccCCcEEEEccccc-cceeEEeccceEEeeee
Confidence 222211 122233344432211111000 011111 1122222367889999997 78888888888888888
Q ss_pred CCCCCCCCCeEEEEEEcCC
Q 017614 266 PNYCGEFDNAGAMMSVDET 284 (368)
Q Consensus 266 ~nY~~~~~N~ga~l~i~~~ 284 (368)
+... -.+-++.|+.+
T Consensus 447 q~qT----efqk~vni~p~ 461 (481)
T COG1311 447 QEQT----EFQKMVNINPT 461 (481)
T ss_pred cchh----ccceEEEecCc
Confidence 7653 34556666654
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=92.84 E-value=0.15 Score=48.98 Aligned_cols=20 Identities=20% Similarity=0.273 Sum_probs=15.4
Q ss_pred HHHHHHh-CCCceEEeeeccc
Q 017614 228 VTEFLQK-HDLELICRAHQVV 247 (368)
Q Consensus 228 v~~fl~~-n~l~~IIRgHq~v 247 (368)
..+++++ -++++|+-||+-.
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~ 229 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHR 229 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCcc
Confidence 4566666 6899999999865
No 92
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=92.26 E-value=0.32 Score=46.24 Aligned_cols=70 Identities=21% Similarity=0.244 Sum_probs=39.2
Q ss_pred ceEEEecCCCC--H--HHHHHHHH-hCCCCCCceEEEecccc-CCCCCcH------HHHHHHHHhhhhCCCcEEEEcccc
Q 017614 54 PIKICGDIHGQ--Y--SDLLRLFE-YGGLPPRSNYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 121 (368)
Q Consensus 54 pi~VvGDIHG~--~--~dL~~ll~-~~g~~~~~~~vFLGDyV-DRG~~sl------Evl~lL~~Lki~~P~~v~lLRGNH 121 (368)
++.++||.-.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. +...-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 47899997653 1 33443333 22223445688999997 5553221 222222221 11234599999999
Q ss_pred ccc
Q 017614 122 ECA 124 (368)
Q Consensus 122 E~~ 124 (368)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 976
No 93
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=92.17 E-value=0.0055 Score=61.85 Aligned_cols=193 Identities=9% Similarity=-0.136 Sum_probs=123.1
Q ss_pred CceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHh----chHHHHHHHHHhccC
Q 017614 80 RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF----NVRLWKIFTDCFNCL 155 (368)
Q Consensus 80 ~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~----~~~l~~~~~~~f~~L 155 (368)
.-..|+++++++++.+.++.+-+-+..+..+-.+-...++||+.. +++++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 346899999999999999999999999888888999999999443 33333322111 134677788888889
Q ss_pred CcEEEEcccEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCC----CCCcccCCCCceeecChH--HHH
Q 017614 156 PVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSND----IKGWEANDRGVSYVFGAD--RVT 229 (368)
Q Consensus 156 Plaaii~~~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~----~~~~~~n~rG~~~~FG~~--~v~ 229 (368)
+...+.+ +++|.||+..|.......+.++.-.. +-+..-..+. |-++-.. ...|.. +|..-.||.| ..-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~-lGd~~gn~kg-~f~llD~~~~~k~tw~~--~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSC-LGDAEGNAKG-GFLLLDSDFNEKGTWEK--PGHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEe-ecccccCCcC-CeEEecCccceeccccc--CCCccccccceeecc
Confidence 9987766 99999999999876544443221110 0010000011 2222211 112221 2233333433 233
Q ss_pred HHHHhCCCceEEeeecccccceEEecCceEEEEecCCCCCCCCCCeEEEEEEcCC
Q 017614 230 EFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET 284 (368)
Q Consensus 230 ~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N~ga~l~i~~~ 284 (368)
++....+.+...+.|+-...+...+.++ .+.++++-|.-..+|-++.+.++.+
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 4556667777788887654444445555 8889999888888899999999876
No 94
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=92.16 E-value=0.3 Score=43.91 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=32.1
Q ss_pred CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccc
Q 017614 78 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVN 127 (368)
Q Consensus 78 ~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~ 127 (368)
.|++.+.+|||+.-.-....+...++-+ -|+++++++||||.....
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCHPM 89 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCccc
Confidence 4677888999998655444444444333 478899999999976543
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=91.01 E-value=0.31 Score=46.35 Aligned_cols=65 Identities=23% Similarity=0.151 Sum_probs=38.3
Q ss_pred ceEEEecCCCCH----------HHHHHHHHhCCCCCCceEEEeccccCCCCCcH-----HHHHHHHHhhhhCCCcEEEEc
Q 017614 54 PIKICGDIHGQY----------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 118 (368)
Q Consensus 54 pi~VvGDIHG~~----------~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lki~~P~~v~lLR 118 (368)
++.-++|+||++ ..+..+++...-.+++-++..||.++..+.+. .++..+-.+ .-.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 467789999985 34555555543324455667899998765431 223333222 1123 456
Q ss_pred ccccc
Q 017614 119 GNHEC 123 (368)
Q Consensus 119 GNHE~ 123 (368)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 96
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.82 E-value=7.2 Score=37.67 Aligned_cols=48 Identities=17% Similarity=0.306 Sum_probs=29.7
Q ss_pred CceEEeeecccccceEEec--CceEEEEecCCCCCCCCCCeEEEEEEc-CCCceEE
Q 017614 237 LELICRAHQVVEDGYEFFA--NRRLITIFSAPNYCGEFDNAGAMMSVD-ETLMCSF 289 (368)
Q Consensus 237 l~~IIRgHq~v~~G~~~~~--~~~viTIFSa~nY~~~~~N~ga~l~i~-~~~~~~~ 289 (368)
=+.++-|||.. -|.+... +++-+.+.|.|.+.. .|.++.+| +++++..
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 45677888876 3555443 256677888898854 45555554 4555544
No 97
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.55 E-value=4.1 Score=36.46 Aligned_cols=116 Identities=22% Similarity=0.379 Sum_probs=80.6
Q ss_pred eEEEecCCC--CHHHHHHHHHhCCCCCC-ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccC
Q 017614 55 IKICGDIHG--QYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (368)
Q Consensus 55 i~VvGDIHG--~~~dL~~ll~~~g~~~~-~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~g 131 (368)
+.++||+|= ...+|-.-|++.-.|+. ..++++|++ -|.|++.+|..+. +.++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 678999993 44566666666666665 468899996 5789999987763 6899999977654
Q ss_pred ChHHHHHHhchHHHHHHHHHhccCCcEEEE--cc-cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHhhhcCCCCC
Q 017614 132 FYDECKRRFNVRLWKIFTDCFNCLPVAALI--DE-KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSND 208 (368)
Q Consensus 132 f~~e~~~~~~~~l~~~~~~~f~~LPlaaii--~~-~il~vHGGisp~~~~l~~I~~i~Rp~~~~~~~~~~dlLWsDP~~~ 208 (368)
..-|..-++ +. ++-|+||-.- +=|.||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 112333233 22 7899999432 1255653
Q ss_pred CCCcccCCCCceeecChHHHHHHHHhCCCceEEeeecccccceEE
Q 017614 209 IKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEF 253 (368)
Q Consensus 209 ~~~~~~n~rG~~~~FG~~~v~~fl~~n~l~~IIRgHq~v~~G~~~ 253 (368)
++.-.-+..+++.++-||+..-+.|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 466666778999999999988777764
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=89.35 E-value=0.48 Score=46.01 Aligned_cols=66 Identities=27% Similarity=0.315 Sum_probs=40.5
Q ss_pred ceEEEecCCCCHHH--------------HHHHHHhCCC-CCCceEEEeccccCCCCC-c-----HHHHHHHHHhhhhCCC
Q 017614 54 PIKICGDIHGQYSD--------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 112 (368)
Q Consensus 54 pi~VvGDIHG~~~d--------------L~~ll~~~g~-~~~~~~vFLGDyVDRG~~-s-----lEvl~lL~~Lki~~P~ 112 (368)
.+..+.|+||++.. +..+++.... .+++-++..||.++..+. | ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 46788999998653 5555555432 234456678999987654 2 234555544431
Q ss_pred cEEEEccccccc
Q 017614 113 NFFLLRGNHECA 124 (368)
Q Consensus 113 ~v~lLRGNHE~~ 124 (368)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3555999953
No 99
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=88.55 E-value=0.96 Score=45.62 Aligned_cols=73 Identities=26% Similarity=0.394 Sum_probs=47.0
Q ss_pred CceEEEecCCCCHHHHHHH---HHhCCCCCCceEEEeccccC-CCCC---cHHH---------HHHHHHhhhhCCCcEEE
Q 017614 53 APIKICGDIHGQYSDLLRL---FEYGGLPPRSNYLFLGDYVD-RGKQ---SLET---------ICLLLAYKIKYPENFFL 116 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL~~l---l~~~g~~~~~~~vFLGDyVD-RG~~---slEv---------l~lL~~Lki~~P~~v~l 116 (368)
|+|.|-|=-||+++.+-+- .++.|-.+.+-++++||+=- |... |+.| ..--..=.++.|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 5789999999999998744 45556566777899999852 2211 1111 11111113456666788
Q ss_pred Ecccccccc
Q 017614 117 LRGNHECAS 125 (368)
Q Consensus 117 LRGNHE~~~ 125 (368)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999863
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=87.15 E-value=1.1 Score=42.79 Aligned_cols=64 Identities=22% Similarity=0.194 Sum_probs=35.1
Q ss_pred eEEEecCCCCHHH----------------------HHHHHHhCCC--CCCceEEEeccccCCCCCcH-----HHHHHHHH
Q 017614 55 IKICGDIHGQYSD----------------------LLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL-----ETICLLLA 105 (368)
Q Consensus 55 i~VvGDIHG~~~d----------------------L~~ll~~~g~--~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~ 105 (368)
+.-++|+||++.. +..+++.... .++.-++..||+++..+.+. .++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 5677899987533 3344444322 22333456899998876432 33344333
Q ss_pred hhhhCCCcEEEEccccccc
Q 017614 106 YKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 106 Lki~~P~~v~lLRGNHE~~ 124 (368)
+ +- -.+. ||||..
T Consensus 83 ~----g~-da~~-GNHefd 95 (264)
T cd07411 83 L----GV-DAMV-GHWEFT 95 (264)
T ss_pred h----CC-eEEe-cccccc
Confidence 2 22 2334 999953
No 101
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=86.94 E-value=1.7 Score=35.76 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 017614 3 PAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEI 51 (368)
Q Consensus 3 ~~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ll~l 51 (368)
...++.+|+.+.+ ++ .|+...+..|+.++.++|+++|+++++
T Consensus 54 ~efv~~mie~FK~-----~K--~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 54 LEFVKAMIEWFKN-----QK--KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHHC-----T------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHHh-----CC--CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4456666666543 22 588999999999999999999999986
No 102
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=86.15 E-value=1.4 Score=45.17 Aligned_cols=55 Identities=24% Similarity=0.350 Sum_probs=34.7
Q ss_pred HHHHHhCCCC-CCceEEEeccccCCCCCc--HHHHHHHHHhhhhCCC----cEEEEcccccc
Q 017614 69 LRLFEYGGLP-PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 123 (368)
Q Consensus 69 ~~ll~~~g~~-~~~~~vFLGDyVDRG~~s--lEvl~lL~~Lki~~P~----~v~lLRGNHE~ 123 (368)
.+.+...-+. ..+..+||||++|-|... -|--.....+|-.+|. .+..+.||||-
T Consensus 82 rr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 82 RRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 3444443333 234577899999988754 3333444455555554 68899999995
No 103
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=84.76 E-value=1.9 Score=41.64 Aligned_cols=74 Identities=24% Similarity=0.275 Sum_probs=41.6
Q ss_pred ceEEEecCCCC--HHHHHHHHHhCCC--CCCceEEEeccccCCCCCcH--H------HHHHHHHhhhhCC-CcEEEEccc
Q 017614 54 PIKICGDIHGQ--YSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGN 120 (368)
Q Consensus 54 pi~VvGDIHG~--~~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~sl--E------vl~lL~~Lki~~P-~~v~lLRGN 120 (368)
+.--.|+-.-+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+.-.++-.+| -.|+.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34445665422 3444555544322 34566889999998886431 1 1112222333333 359999999
Q ss_pred ccccccc
Q 017614 121 HECASVN 127 (368)
Q Consensus 121 HE~~~i~ 127 (368)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9986543
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.37 E-value=1.7 Score=50.39 Aligned_cols=65 Identities=18% Similarity=0.122 Sum_probs=38.7
Q ss_pred ceEEEecCCCCH---HHHHHHHHhCCC-CCCceEEEeccccCCCCCcH-----HHHHHHHHhhhhCCCcEEEEcccccc
Q 017614 54 PIKICGDIHGQY---SDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 54 pi~VvGDIHG~~---~dL~~ll~~~g~-~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
.++.++|+||.+ ..+..+++...- .++.-++..||++++.+.+. .++..+-++ +--.+..||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEeccccc
Confidence 477899999985 334444443322 22333344799999876542 344444333 233568999996
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=79.16 E-value=3 Score=40.28 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=36.2
Q ss_pred ceEEEecCCCCH---------------------HHHHHHHHhCCC-CCCceEEEeccccCCCCCc-----HHHHHHHHHh
Q 017614 54 PIKICGDIHGQY---------------------SDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQS-----LETICLLLAY 106 (368)
Q Consensus 54 pi~VvGDIHG~~---------------------~dL~~ll~~~g~-~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~L 106 (368)
.+.-.+|+||++ ..+..+++.... .++.-++-.||.++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 366789999875 334444544322 2333445579999876543 2233333332
Q ss_pred hhhCCCcEEEEccccccc
Q 017614 107 KIKYPENFFLLRGNHECA 124 (368)
Q Consensus 107 ki~~P~~v~lLRGNHE~~ 124 (368)
-. .+. ..||||..
T Consensus 82 ---g~-D~~-~lGNHefd 94 (281)
T cd07409 82 ---GY-DAM-TLGNHEFD 94 (281)
T ss_pred ---CC-CEE-Eecccccc
Confidence 22 233 44999963
No 106
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=78.98 E-value=3.8 Score=37.36 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=40.2
Q ss_pred eEEEecCCCC-----HHHHHHHHHhCC-CCCCceEEEeccccCCCCCcH------------H-HHHHHHHh--hhhCCCc
Q 017614 55 IKICGDIHGQ-----YSDLLRLFEYGG-LPPRSNYLFLGDYVDRGKQSL------------E-TICLLLAY--KIKYPEN 113 (368)
Q Consensus 55 i~VvGDIHG~-----~~dL~~ll~~~g-~~~~~~~vFLGDyVDRG~~sl------------E-vl~lL~~L--ki~~P~~ 113 (368)
|++++|+|=. ++.|.++|+... ...-+.+|++|+++|.-.... + .+..+... ++..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677887744 667778888776 555567999999999632221 1 11111111 1123357
Q ss_pred EEEEccccccccc
Q 017614 114 FFLLRGNHECASV 126 (368)
Q Consensus 114 v~lLRGNHE~~~i 126 (368)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 107
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=78.34 E-value=4.1 Score=39.52 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=46.4
Q ss_pred CceEEEecCCCC--HHHHHHHHHhCCCCCC-ceEEEeccccCCC-CCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 53 APIKICGDIHGQ--YSDLLRLFEYGGLPPR-SNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 53 ~pi~VvGDIHG~--~~dL~~ll~~~g~~~~-~~~vFLGDyVDRG-~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
|++.++|||=|. ...+...|..+..... +-.|..||....| .-+-++...|..+- -.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 578999999999 5566666665544333 3455579999776 45677777776553 356655 999864
No 108
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=77.14 E-value=5.2 Score=36.98 Aligned_cols=82 Identities=21% Similarity=0.312 Sum_probs=46.7
Q ss_pred CCceEEEecccc--CCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHHHHhchHHHHHHHHHhccCC
Q 017614 79 PRSNYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP 156 (368)
Q Consensus 79 ~~~~~vFLGDyV--DRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LP 156 (368)
+++.++.-||+- =|=++..+=+.++=+ -|+.=+++|||||.+.-. ...+...+... .-..++.|+.+-
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~n 112 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELLN 112 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEee
Confidence 445556669974 233344444444433 489999999999987542 22333344333 345667777777
Q ss_pred cEEEEcccEEEecCCCCCCC
Q 017614 157 VAALIDEKILCMHGGLSPDL 176 (368)
Q Consensus 157 laaii~~~il~vHGGisp~~ 176 (368)
+| +++ +-|=++|+.
T Consensus 113 ~a-I~G-----~RgW~s~~~ 126 (230)
T COG1768 113 YA-IVG-----VRGWDSPSF 126 (230)
T ss_pred EE-EEE-----eecccCCCC
Confidence 44 444 334455543
No 109
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=76.77 E-value=1.9 Score=46.28 Aligned_cols=60 Identities=27% Similarity=0.322 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCc----eEEeeecccc--cceEE-ecCceEEEE---ecCCCCCCCCCCeEEEEEEcCC
Q 017614 224 GADRVTEFLQKHDLE----LICRAHQVVE--DGYEF-FANRRLITI---FSAPNYCGEFDNAGAMMSVDET 284 (368)
Q Consensus 224 G~~~v~~fl~~n~l~----~IIRgHq~v~--~G~~~-~~~~~viTI---FSa~nY~~~~~N~ga~l~i~~~ 284 (368)
.++..++.|+..|++ .||-||.||. +|=.. -++||++.| ||.. |....+=+|--|..+..
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTLiyNS~ 576 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTLIYNSY 576 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEEEecCC
Confidence 466788899999999 9999999987 66543 578999999 7765 77776667766654433
No 110
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=75.00 E-value=5.8 Score=37.77 Aligned_cols=56 Identities=25% Similarity=0.201 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCcEEEEcccccc
Q 017614 63 GQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 63 G~~~dL~~ll~~~g~~-~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
|.+.-+..+++...-. ++.-++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4466666677654432 334566689999887532 34555554442 23557899996
No 111
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.73 E-value=7 Score=40.75 Aligned_cols=69 Identities=22% Similarity=0.412 Sum_probs=52.0
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccc
Q 017614 52 EAPIKICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 121 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNH 121 (368)
+++|.||||.-|+++.|.+-.+.... .|-+-++++|++.+--.++-|++.+..- +...|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng-~~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNG-TKKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcC-CccCceeEEEecCCC
Confidence 47899999999999999776655433 2346788899999987778887766544 345777788887776
No 112
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=70.26 E-value=5.9 Score=38.56 Aligned_cols=66 Identities=18% Similarity=0.075 Sum_probs=36.7
Q ss_pred ceEEEecCCCCHHH-------------HHHH---HHh-CCC-CCCceEEEeccccCCCCCc-------HHHHHHHHHhhh
Q 017614 54 PIKICGDIHGQYSD-------------LLRL---FEY-GGL-PPRSNYLFLGDYVDRGKQS-------LETICLLLAYKI 108 (368)
Q Consensus 54 pi~VvGDIHG~~~d-------------L~~l---l~~-~g~-~~~~~~vFLGDyVDRG~~s-------lEvl~lL~~Lki 108 (368)
.|+-..|+||++.. +.++ ++. ... .++.-++..||.++.-+.+ .-.+.++-++
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 47778999998641 2222 221 111 2233455689999765433 1234444333
Q ss_pred hCCCcEEEEccccccc
Q 017614 109 KYPENFFLLRGNHECA 124 (368)
Q Consensus 109 ~~P~~v~lLRGNHE~~ 124 (368)
+--.+..||||.-
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2456778999984
No 113
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=69.39 E-value=6.1 Score=41.53 Aligned_cols=68 Identities=26% Similarity=0.250 Sum_probs=40.7
Q ss_pred cCceEEEecCCCCHH------------HHHH---HHHhCCCC-CCceEEEeccccCCCC------CcHHHHHHHHHhhhh
Q 017614 52 EAPIKICGDIHGQYS------------DLLR---LFEYGGLP-PRSNYLFLGDYVDRGK------QSLETICLLLAYKIK 109 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~------------dL~~---ll~~~g~~-~~~~~vFLGDyVDRG~------~slEvl~lL~~Lki~ 109 (368)
+-.+.-..|+||++. -+.+ +.+...-. ++.-+|=.||++++.+ .....+.+|-.++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 346778899999998 3333 23222221 1233444799999843 2334566666654
Q ss_pred CCCcEEEEccccccc
Q 017614 110 YPENFFLLRGNHECA 124 (368)
Q Consensus 110 ~P~~v~lLRGNHE~~ 124 (368)
-=.+.-||||.-
T Consensus 104 ---yDa~tiGNHEFd 115 (517)
T COG0737 104 ---YDAMTLGNHEFD 115 (517)
T ss_pred ---CcEEeecccccc
Confidence 345677999974
No 114
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=68.80 E-value=9 Score=38.62 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=30.2
Q ss_pred CCceEEEeccccCCCCC---cHHHHHHHHHhhhhCCCcEEEEcccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQ---SLETICLLLAYKIKYPENFFLLRGNHECAS 125 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~---slEvl~lL~~Lki~~P~~v~lLRGNHE~~~ 125 (368)
..+-+||+||.|+. .. ...++...++-.+.+.=-...+.||||...
T Consensus 100 ~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 100 KPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 34678999999987 33 233444444444445555788999999764
No 115
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=66.77 E-value=44 Score=31.05 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=64.5
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCCh----------------HHHHHHhchHH
Q 017614 81 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY----------------DECKRRFNVRL 144 (368)
Q Consensus 81 ~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~----------------~e~~~~~~~~l 144 (368)
..+|||| -|.+.-|.+.++-+++-+|..+.++ -|+-|.+..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4689999 5899999999999999999887776 7999988777644432 34444455677
Q ss_pred HHHHHHHhccCCcEEEEcccEEEecC
Q 017614 145 WKIFTDCFNCLPVAALIDEKILCMHG 170 (368)
Q Consensus 145 ~~~~~~~f~~LPlaaii~~~il~vHG 170 (368)
|..+.....++++...+--+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888888887766666777766
No 116
>PF14164 YqzH: YqzH-like protein
Probab=66.62 E-value=21 Score=27.32 Aligned_cols=47 Identities=21% Similarity=0.303 Sum_probs=36.6
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 017614 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPN 47 (368)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~i~~L~~~a~~il~~ep~ 47 (368)
|+...|+++|.+-++.-.......+|++.|...||....+.-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 66677777777766543333456789999999999999999999986
No 117
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=65.72 E-value=8.2 Score=37.42 Aligned_cols=66 Identities=20% Similarity=0.046 Sum_probs=34.6
Q ss_pred ceEEEecCCCCHHH----------HHHHHHhCCC-----CCCceEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCc
Q 017614 54 PIKICGDIHGQYSD----------LLRLFEYGGL-----PPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPEN 113 (368)
Q Consensus 54 pi~VvGDIHG~~~d----------L~~ll~~~g~-----~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lki~~P~~ 113 (368)
.|+-..|+||++.. +..+++.... .++.-++-.||.+...+.+ .-++.++-++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36778999998533 3344433221 2334455589998433322 223344444331 2
Q ss_pred EEEEccccccc
Q 017614 114 FFLLRGNHECA 124 (368)
Q Consensus 114 v~lLRGNHE~~ 124 (368)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 33 44999953
No 118
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=64.81 E-value=11 Score=37.24 Aligned_cols=64 Identities=20% Similarity=0.051 Sum_probs=37.9
Q ss_pred eEEEecCCCCHH------HHHHHHHhCCC-----CCCceEEEeccccCCCCC-------------cHHHHHHHHHhhhhC
Q 017614 55 IKICGDIHGQYS------DLLRLFEYGGL-----PPRSNYLFLGDYVDRGKQ-------------SLETICLLLAYKIKY 110 (368)
Q Consensus 55 i~VvGDIHG~~~------dL~~ll~~~g~-----~~~~~~vFLGDyVDRG~~-------------slEvl~lL~~Lki~~ 110 (368)
|+-..|+||++. .+..+++.... .+++-++..||.+..++. ..-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 556789999953 33333433211 234456668999876543 334455555554
Q ss_pred CCcEEEEcccccc
Q 017614 111 PENFFLLRGNHEC 123 (368)
Q Consensus 111 P~~v~lLRGNHE~ 123 (368)
-=.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 34667899995
No 119
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=62.20 E-value=18 Score=34.91 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=41.9
Q ss_pred ceEEEecCCCCHHH--HHHHHHhCCCCC-CceEEEeccccCCC-CCcHHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 54 PIKICGDIHGQYSD--LLRLFEYGGLPP-RSNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 54 pi~VvGDIHG~~~d--L~~ll~~~g~~~-~~~~vFLGDyVDRG-~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
++.++|||=|.-.. +.+.+....... .+-.+-.||..--| .-+-++...|..+.+ .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 47899999998543 344554433222 23344579998776 367788777776642 34444 999754
No 120
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=59.96 E-value=33 Score=33.81 Aligned_cols=73 Identities=14% Similarity=0.248 Sum_probs=48.1
Q ss_pred CceEEEecCC----CCHHHHHHHHHhC-CCCC----CceEEEeccccCCC----CCc----HHHHHHHHHh-hhhCC---
Q 017614 53 APIKICGDIH----GQYSDLLRLFEYG-GLPP----RSNYLFLGDYVDRG----KQS----LETICLLLAY-KIKYP--- 111 (368)
Q Consensus 53 ~pi~VvGDIH----G~~~dL~~ll~~~-g~~~----~~~~vFLGDyVDRG----~~s----lEvl~lL~~L-ki~~P--- 111 (368)
..++|.||+| -.++.|.++|+.. ..-+ ...+|++|++.-+. ..+ .|-..-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 4689999999 4477888888876 2212 34689999999663 222 2333344332 22344
Q ss_pred --CcEEEEcccccccc
Q 017614 112 --ENFFLLRGNHECAS 125 (368)
Q Consensus 112 --~~v~lLRGNHE~~~ 125 (368)
.++++++|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 78999999999753
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=55.85 E-value=15 Score=42.83 Aligned_cols=66 Identities=23% Similarity=0.213 Sum_probs=37.5
Q ss_pred CceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeccccCCCCC--------------cHHHHH
Q 017614 53 APIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQ--------------SLETIC 101 (368)
Q Consensus 53 ~pi~VvGDIHG~~~d----------------L~~ll~~~g~-~~~~~~vFLGDyVDRG~~--------------slEvl~ 101 (368)
-.|.-..|+||++.. +..+++.... .++.-+|-.||.+...+. ..-++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 458889999998643 2333443321 123334448999986652 122334
Q ss_pred HHHHhhhhCCCcEEEEcccccc
Q 017614 102 LLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 102 lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
.+-++ +--....||||.
T Consensus 122 ~mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred HHhhc-----CccEEeeccccc
Confidence 44333 234566899996
No 122
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=55.79 E-value=15 Score=39.94 Aligned_cols=66 Identities=20% Similarity=0.088 Sum_probs=38.6
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeccccCCCCCc-------------HHHHHHH
Q 017614 54 PIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQS-------------LETICLL 103 (368)
Q Consensus 54 pi~VvGDIHG~~~d----------------L~~ll~~~g~-~~~~~~vFLGDyVDRG~~s-------------lEvl~lL 103 (368)
+|.-..|+||++.. +..+++...- .++.-+|-.||.+...+.+ .-++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 56778999999753 2333433221 1334456689999865433 1244445
Q ss_pred HHhhhhCCCcEEEEccccccc
Q 017614 104 LAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 104 ~~Lki~~P~~v~lLRGNHE~~ 124 (368)
-.+. --....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 4443 345778999953
No 123
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=55.77 E-value=16 Score=39.82 Aligned_cols=69 Identities=17% Similarity=0.107 Sum_probs=41.7
Q ss_pred ecCceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeccccCCCCCcH-------------HHH
Q 017614 51 IEAPIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQSL-------------ETI 100 (368)
Q Consensus 51 l~~pi~VvGDIHG~~~d----------------L~~ll~~~g~-~~~~~~vFLGDyVDRG~~sl-------------Evl 100 (368)
+..+|.-..|+||++.. +..+++...- .++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34567888999999743 2333333221 13445666899998665431 245
Q ss_pred HHHHHhhhhCCCcEEEEccccccc
Q 017614 101 CLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 101 ~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
..+-.+. --....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 5555553 356778999953
No 124
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=51.61 E-value=12 Score=39.24 Aligned_cols=57 Identities=26% Similarity=0.370 Sum_probs=41.5
Q ss_pred hHHHHHHHHhCCCc----eEEeeecccccce--E-EecCceEEEE---ecCCCCCCCCCCeEEEEEEc
Q 017614 225 ADRVTEFLQKHDLE----LICRAHQVVEDGY--E-FFANRRLITI---FSAPNYCGEFDNAGAMMSVD 282 (368)
Q Consensus 225 ~~~v~~fl~~n~l~----~IIRgHq~v~~G~--~-~~~~~~viTI---FSa~nY~~~~~N~ga~l~i~ 282 (368)
++..++.|+..|++ .||-||.+|.++= . .-++|+++-| ||-. |....+=+|--|..+
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~TgiAGYTllYN 581 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTGIAGYTLLYN 581 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccccceeEeeec
Confidence 45677899999998 8999999987543 2 2478999988 6543 777767677655443
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=51.12 E-value=29 Score=35.72 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=39.4
Q ss_pred CceEEEecCC-CCHHHH--HHHHHhCC-CCCCceEEEeccccCCCCCcHHH------HHHHHHhhh-hCCCcEEEEcccc
Q 017614 53 APIKICGDIH-GQYSDL--LRLFEYGG-LPPRSNYLFLGDYVDRGKQSLET------ICLLLAYKI-KYPENFFLLRGNH 121 (368)
Q Consensus 53 ~pi~VvGDIH-G~~~dL--~~ll~~~g-~~~~~~~vFLGDyVDRG~~slEv------l~lL~~Lki-~~P~~v~lLRGNH 121 (368)
-+++++||-= |..... .+.+...+ ..+.+-+|-+||-++.|..|+.= .+-++.-+- .-.-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3689999954 332221 12222222 22344566799999888776432 333321110 0112589999999
Q ss_pred ccc
Q 017614 122 ECA 124 (368)
Q Consensus 122 E~~ 124 (368)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 963
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=46.51 E-value=28 Score=34.19 Aligned_cols=93 Identities=22% Similarity=0.230 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeee--c-------CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCc
Q 017614 26 LSESEIRQLCVVSKGIFLRQPNLLEI--E-------APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS 96 (368)
Q Consensus 26 l~~~~i~~L~~~a~~il~~ep~ll~l--~-------~pi~VvGDIHG~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~s 96 (368)
++++....-...++..=.=+|++-.+ + .+++.++|.|+...+.. ..|+.+-.+-+||+-.-|. +
T Consensus 26 ~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~ 98 (305)
T KOG3947|consen 26 YSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-P 98 (305)
T ss_pred cCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-H
Confidence 55555544444444433334543333 1 35889999999755543 3566666788999877664 3
Q ss_pred HHHHHHHHHhhhhCC-CcEEEEccccccccc
Q 017614 97 LETICLLLAYKIKYP-ENFFLLRGNHECASV 126 (368)
Q Consensus 97 lEvl~lL~~Lki~~P-~~v~lLRGNHE~~~i 126 (368)
-||..+=-.+ -..| ..=+.|+||||...-
T Consensus 99 ~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 99 EEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred HHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 4444332111 1222 234679999997543
No 127
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=46.48 E-value=33 Score=36.55 Aligned_cols=41 Identities=24% Similarity=0.135 Sum_probs=24.6
Q ss_pred CCceEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCcEEEEccccccc
Q 017614 79 PRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 79 ~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
++.-++.-||.+...+.+ ...+.++-++. --.+..||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 344566689999765433 22344444443 456788999953
No 128
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=46.45 E-value=33 Score=37.25 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=32.6
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccc
Q 017614 81 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 122 (368)
Q Consensus 81 ~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE 122 (368)
+++-.+||+.||||.+--++..|+.. .+|=+--||||
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHD 222 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHD 222 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcC-----CCccccccchH
Confidence 46778999999999999999999865 37888999999
No 129
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=42.91 E-value=34 Score=36.30 Aligned_cols=68 Identities=19% Similarity=0.051 Sum_probs=35.7
Q ss_pred cCceEEEecCCCCHHH----------HHHHHHhCC-----CCCCceEEEeccccCCCCCc-----HHHHHHHHHhhhhCC
Q 017614 52 EAPIKICGDIHGQYSD----------LLRLFEYGG-----LPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYP 111 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~d----------L~~ll~~~g-----~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lki~~P 111 (368)
+-.+.-+.|+||++.. +..+++... ..++.-+|.-||.+...+.+ .-++.++-++.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 3457788999998742 223333221 12344455679998643322 12233343332
Q ss_pred CcEEEEccccccc
Q 017614 112 ENFFLLRGNHECA 124 (368)
Q Consensus 112 ~~v~lLRGNHE~~ 124 (368)
-.+. ..||||.-
T Consensus 110 ~Da~-tlGNHEFD 121 (551)
T PRK09558 110 YDAM-AVGNHEFD 121 (551)
T ss_pred CCEE-cccccccC
Confidence 2333 34999954
No 130
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=41.99 E-value=37 Score=38.19 Aligned_cols=67 Identities=21% Similarity=0.096 Sum_probs=39.1
Q ss_pred CceEEEecCCCCHHHH----------------HHHHHhCCC-CCCceEEEeccccCCCCCc--------------HHHHH
Q 017614 53 APIKICGDIHGQYSDL----------------LRLFEYGGL-PPRSNYLFLGDYVDRGKQS--------------LETIC 101 (368)
Q Consensus 53 ~pi~VvGDIHG~~~dL----------------~~ll~~~g~-~~~~~~vFLGDyVDRG~~s--------------lEvl~ 101 (368)
-+|+-..|+||++... ..+++...- .++.-+|-.||.+..-+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 4577789999996432 222332211 1334466689999765432 12555
Q ss_pred HHHHhhhhCCCcEEEEccccccc
Q 017614 102 LLLAYKIKYPENFFLLRGNHECA 124 (368)
Q Consensus 102 lL~~Lki~~P~~v~lLRGNHE~~ 124 (368)
.+-.|. --....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 555553 346778999953
No 131
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=39.69 E-value=1.1e+02 Score=23.76 Aligned_cols=71 Identities=13% Similarity=0.034 Sum_probs=47.2
Q ss_pred ecCceEEEecCCCCHHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccc
Q 017614 51 IEAPIKICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 121 (368)
Q Consensus 51 l~~pi~VvGDIHG~~~dL~~ll~~~g~--~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNH 121 (368)
....+.|+=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+-.+...+.+.+++...|+
T Consensus 10 ~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 10 EPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 334577777877788888887776532 34556778999999888888766666666555677766666554
No 132
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=38.73 E-value=1.5e+02 Score=26.36 Aligned_cols=102 Identities=16% Similarity=0.218 Sum_probs=60.3
Q ss_pred EEEecCCCCHHHHHHHH-HhCCC------------CCCceEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEccccc
Q 017614 56 KICGDIHGQYSDLLRLF-EYGGL------------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 122 (368)
Q Consensus 56 ~VvGDIHG~~~dL~~ll-~~~g~------------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE 122 (368)
++.+-.+||-..+.+.+ +.++. .++.++||+|=.+|+|.-+-++..+|-.|+ +.+|++.-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~---- 74 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG---- 74 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE----
Confidence 45556677777665544 22322 234579999999999999999999987764 45665541
Q ss_pred ccccccccCChHHHHHHhchHHHHHHHHHhccCCcEEEEcccEEEecCCCCCCC
Q 017614 123 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL 176 (368)
Q Consensus 123 ~~~i~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGisp~~ 176 (368)
..|+.. ...|...+.+....++.. ...+- ..|+++|-++|.+
T Consensus 75 ------T~G~~~--~s~~~~~~~~~~~~~~~~---~~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 75 ------TAGAGP--DSEYAKKILKNVEALLPK---GNEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred ------ecCCCC--chHHHHHHHHHHHHhhcc---CCeec-ceEEeCCcCCHHH
Confidence 223321 122223333444443332 22222 4788899998764
No 133
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.55 E-value=16 Score=32.79 Aligned_cols=48 Identities=21% Similarity=0.336 Sum_probs=31.5
Q ss_pred eecChHHHHHHHHhCCCce---------EEeeecccccceEEecCceEEEEecCCCCCCCCCC
Q 017614 221 YVFGADRVTEFLQKHDLEL---------ICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDN 274 (368)
Q Consensus 221 ~~FG~~~v~~fl~~n~l~~---------IIRgHq~v~~G~~~~~~~~viTIFSa~nY~~~~~N 274 (368)
+.-++...+.||.+-|-+. -|||+-.+++.+.+..+ +.+|.||.+++.
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 3445667788888876554 48888777554444233 569999975543
No 134
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=33.09 E-value=1.4e+02 Score=32.22 Aligned_cols=54 Identities=20% Similarity=0.194 Sum_probs=38.9
Q ss_pred CceEEEecCCC------------CHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHh
Q 017614 53 APIKICGDIHG------------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAY 106 (368)
Q Consensus 53 ~pi~VvGDIHG------------~~~dL~~ll~~~g~~~~~~~vFLGDyVDRG~~slEvl~lL~~L 106 (368)
.+|.|-.|+|= .|..|..+|..+.-...+-++.=||++.-..-|.+++.-.+.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 46889999982 3677888888766555555566699999888887776554443
No 135
>KOG3462 consensus Predicted membrane protein [Function unknown]
Probab=30.30 E-value=84 Score=25.91 Aligned_cols=29 Identities=31% Similarity=0.487 Sum_probs=22.7
Q ss_pred CCCCCcccchhhhHh---hhcchhHHHHHHHH
Q 017614 318 MKVRSYLVIPKYMDF---IFGFDGVLMRLFIY 346 (368)
Q Consensus 318 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 346 (368)
.....-..+|||+.+ |||.-|+.+|+=+-
T Consensus 24 ~~~~~eD~~pdYmn~lgmIfsmcGlM~r~KwC 55 (105)
T KOG3462|consen 24 QGAANEDPPPDYMNFLGMIFSMCGLMFRLKWC 55 (105)
T ss_pred ccccccCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 345567789999987 69999999998543
No 136
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=29.20 E-value=25 Score=30.60 Aligned_cols=85 Identities=26% Similarity=0.421 Sum_probs=48.5
Q ss_pred cCCCCHHHHHHHHHhCCCCCCceE--EEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEEcccccccccccccCChHHHH
Q 017614 60 DIHGQYSDLLRLFEYGGLPPRSNY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECK 137 (368)
Q Consensus 60 DIHG~~~dL~~ll~~~g~~~~~~~--vFLGDyVDRG~~slEvl~lL~~Lki~~P~~v~lLRGNHE~~~i~~~~gf~~e~~ 137 (368)
|+.|++..|.+.|+.+++|..-++ +-.||= ..-+.++..+ -+.|+..|.-.. +...+..+..--
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~p----~afLpil~~~---L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGDP----SAFLPILHYA---LLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCCH----HHHHHHHHHH---HHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999944332 233431 1122222222 223443332111 112222233333
Q ss_pred HHhchHHHHHHHHHhccCCcE
Q 017614 138 RRFNVRLWKIFTDCFNCLPVA 158 (368)
Q Consensus 138 ~~~~~~l~~~~~~~f~~LPla 158 (368)
.++-+.+|+.+.+.|.+-|.-
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 456678899999999998874
No 137
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=26.48 E-value=84 Score=35.23 Aligned_cols=67 Identities=21% Similarity=0.102 Sum_probs=38.4
Q ss_pred cCceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeccccCCCCCc------------------
Q 017614 52 EAPIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQS------------------ 96 (368)
Q Consensus 52 ~~pi~VvGDIHG~~~d----------------L~~ll~~~g~-~~~~~~vFLGDyVDRG~~s------------------ 96 (368)
.-+|+-..|+||++.. +..+++.... .+++-+|-.||.+-.-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4468889999999633 2223333221 1344566689988543321
Q ss_pred -HHHHHHHHHhhhhCCCcEEEEcccccc
Q 017614 97 -LETICLLLAYKIKYPENFFLLRGNHEC 123 (368)
Q Consensus 97 -lEvl~lL~~Lki~~P~~v~lLRGNHE~ 123 (368)
.-++.++-+|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23455554443 34667899994
No 138
>PF09782 NDUF_B6: NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit; InterPro: IPR019174 The NADH dehydrogenase [ubiquinone] complex performs the first stage of electron transfer from NADH to the respiratory chain. This entry represents an accessory subunit that is not thought to be involved in catalysis [].
Probab=22.36 E-value=67 Score=28.85 Aligned_cols=23 Identities=35% Similarity=0.729 Sum_probs=17.7
Q ss_pred HHHHHHHhhhcccc-eeeeeeeee
Q 017614 341 MRLFIYLFFKYHHN-WYRTRVYGL 363 (368)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~~~ 363 (368)
--.+|+..+|||.| |-|++-|+.
T Consensus 98 ~~w~~~Yy~KYn~~~W~~~~g~~~ 121 (156)
T PF09782_consen 98 PAWIIHYYFKYNVNDWTRKKGYRV 121 (156)
T ss_pred HHHHHHHHHhhcccCCcccCCcee
Confidence 34567889999987 988877764
No 139
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=21.07 E-value=1.7e+02 Score=30.65 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCCceEEeeecccccceEEecCceE
Q 017614 226 DRVTEFLQKHDLELICRAHQVVEDGYEFFANRRL 259 (368)
Q Consensus 226 ~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~v 259 (368)
..++..+-++++++++-||.-.-+....-.+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3689999999999999999876555444445443
No 140
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=20.17 E-value=1.6e+02 Score=28.03 Aligned_cols=39 Identities=23% Similarity=0.444 Sum_probs=32.2
Q ss_pred ChHHHHHHHHhCCCceEEeeecccccceEEecCceEEEEecC
Q 017614 224 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (368)
Q Consensus 224 G~~~v~~fl~~n~l~~IIRgHq~v~~G~~~~~~~~viTIFSa 265 (368)
....+-.||+.+|.. .-+|++.+||.|+.++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 466788999999965 468999999999998888887653
Done!